##fileformat=VCFv4.1 ##fileDate=20150721 ##source=freeBayes v0.9.15-1-g076a2a2 ##reference=../Zosterops_genome/Zosterops_genome.fsa ##phasing=none ##commandline="./freebayes -f ../Zosterops_genome/Zosterops_genome.fsa 1002a.bam 1045b.bam 1046b.bam 1047a.bam 11_0815c.bam 11_0841b.bam 11_0847b.bam 11_0855a.bam 11_0887a.bam 11_0889a.bam 11_0990a.bam 11_0993a.bam 11_0999a.bam 11_1006a.bam 11_1013a.bam 11_1014a.bam 11_1033a.bam 11_1037a.bam 11_1044a.bam 123.bam 1240.bam 1241.bam 1248.bam 1336c.bam 1340.bam 1366.bam 137.bam 138.bam 141.bam 142.bam 1434.bam 143.bam 1445c.bam 1448.bam 1476b.bam 1478b.bam 1482b.bam 1483a.bam 1484a.bam 1487a.bam 1489a.bam 1497a.bam 149.bam 1501c.bam 1502a.bam 1503a.bam 152.bam 1575c.bam 1577b.bam 1579b.bam 1588a.bam 158.bam 1595b.bam 159.bam 1689a.bam 1757a.bam 1765b.bam 1768a.bam 1771a.bam 181c.bam 182.bam 193.bam 196.bam 20.bam 21.bam 228.bam 22.bam 240.bam 264.bam 265.bam 27.bam 40b.bam 42.bam 438.bam 439.bam 444.bam 449.bam 450.bam 48.bam 579b.bam 580b.bam 581b.bam 582b.bam 583b.bam 586b.bam 588b.bam 594b.bam 59b.bam 624c.bam 653a.bam 667.bam 993.bam 994.bam 995c.bam 999a.bam --genotype-qualities" ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT 1002a.bam 1045b.bam 1046b.bam 1047a.bam 11_0815c.bam 11_0841b.bam 11_0847b.bam 11_0887a.bam 11_0889a.bam 11_0990a.bam 11_0993a.bam 11_0999a.bam 11_1006a.bam 11_1013a.bam 11_1014a.bam 11_1033a.bam 11_1037a.bam 11_1044a.bam 123.bam 1240.bam 1241.bam 1248.bam 1340.bam 1366.bam 137.bam 138.bam 141.bam 142.bam 1434.bam 143.bam 1445c.bam 1448.bam 1476b.bam 1478b.bam 1482b.bam 1483a.bam 1484a.bam 1487a.bam 1489a.bam 1497a.bam 149.bam 1501c.bam 1502a.bam 1503a.bam 152.bam 1575c.bam 1577b.bam 1579b.bam 1588a.bam 158.bam 1595b.bam 159.bam 1689a.bam 1757a.bam 1765b.bam 1768a.bam 1771a.bam 181c.bam 193.bam 196.bam 20.bam 21.bam 228.bam 22.bam 240.bam 264.bam 265.bam 27.bam 40b.bam 42.bam 438.bam 439.bam 444.bam 449.bam 450.bam 48.bam 579b.bam 580b.bam 581b.bam 582b.bam 583b.bam 586b.bam 588b.bam 594b.bam 59b.bam 624c.bam 653a.bam 667.bam 993.bam 994.bam 995c.bam 999a.bam scaffold_6 109625 . T C 343.932 . AB=0.517241;ABP=3.08518;AC=1;AF=0.00543478;AN=184;AO=16;CIGAR=1X;DP=1446;DPB=1446;DPRA=1.81295;EPP=3.55317;EPPR=6.96271;GTI=0;LEN=1;MEANALT=1;MQM=59.0625;MQMR=59.951;NS=92;NUMALT=1;ODDS=4.72736;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=562;QR=51785;RO=1429;RPP=37.7539;RPPR=2994.16;RUN=1;SAF=9;SAP=3.55317;SAR=7;SRF=686;SRP=7.9474;SRR=743;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.8615:10:10:377:0:0:0,-3.0103,-10 0/0:23.7894:3:3:114:0:0:0,-0.90309,-10 0/0:71.9541:19:19:661:0:0:0,-5.71957,-10 0/0:47.8718:11:11:408:0:0:0,-3.31133,-10 0/0:59.913:15:15:519:0:0:0,-4.51545,-10 0/0:56.9027:14:14:526:0:0:0,-4.21442,-10 0/0:99:36:36:1307:0:0:0,-10,-10 0/0:90.016:25:25:854:0:0:0,-7.52575,-10 0/0:23.7894:3:3:110:0:0:0,-0.90309,-10 0/0:26.7997:4:4:143:0:0:0,-1.20412,-10 0/0:41.8512:9:9:342:0:0:0,-2.70927,-10 0/0:23.7894:3:3:110:0:0:0,-0.90309,-10 0/0:99:28:28:1052:0:0:0,-8.42884,-10 0/0:77.9747:21:21:751:0:0:0,-6.32163,-10 0/0:99:31:31:1060:0:0:0,-9.33193,-10 0/0:77.9747:21:21:769:0:0:0,-6.32163,-10 0/1:99:29:14:523:15:524:-10,0,-10 0/0:32.8203:6:6:225:0:0:0,-1.80618,-10 0/0:53.8924:13:13:459:0:0:0,-3.91339,-10 0/0:83.9952:23:23:864:0:0:0,-6.92369,-10 0/0:59.913:15:15:514:0:0:0,-4.51545,-10 0/0:99:30:30:1033:0:0:0,-9.0309,-10 0/0:32.8203:6:6:226:0:0:0,-1.80618,-10 0/0:71.9541:19:19:699:0:0:0,-5.71957,-10 0/0:59.913:15:15:566:0:0:0,-4.51545,-10 0/0:65.9336:17:17:631:0:0:0,-5.11751,-10 0/0:62.9233:16:16:571:0:0:0,-4.81648,-10 0/0:53.8924:13:13:454:0:0:0,-3.91339,-10 0/0:41.8512:9:9:341:0:0:0,-2.70927,-10 0/0:99:30:30:1089:0:0:0,-9.0309,-10 0/0:32.8203:6:6:217:0:0:0,-1.80618,-10 0/0:23.7894:3:3:114:0:0:0,-0.90309,-10 0/0:59.913:15:15:562:0:0:0,-4.51545,-10 0/0:50.8821:12:12:452:0:0:0,-3.61236,-10 0/0:65.9336:17:17:637:0:0:0,-5.11751,-10 0/0:29.81:5:5:190:0:0:0,-1.50515,-10 0/0:20.7791:2:2:75:0:0:0,-0.60206,-7.125 0/0:62.9233:16:16:570:0:0:0,-4.81648,-10 0/0:38.8409:8:8:293:0:0:0,-2.40824,-10 0/0:50.8821:12:12:447:0:0:0,-3.61236,-10 0/0:87.0057:24:24:878:0:0:0,-7.22472,-10 0/0:47.8718:11:11:385:0:0:0,-3.31133,-10 0/0:50.8821:12:12:449:0:0:0,-3.61236,-10 0/0:90.016:25:25:900:0:0:0,-7.52575,-10 0/0:62.9233:16:16:606:0:0:0,-4.81648,-10 0/0:68.9439:18:18:659:0:0:0,-5.41854,-10 0/0:80.9851:22:22:786:0:0:0,-6.62266,-10 0/0:53.8924:13:13:477:0:0:0,-3.91339,-10 0/0:41.8512:9:9:329:0:0:0,-2.70927,-10 0/0:74.9645:20:20:720:0:0:0,-6.0206,-10 0/0:32.8203:6:6:228:0:0:0,-1.80618,-10 0/0:99:29:29:1053:0:0:0,-8.72987,-10 0/0:59.913:15:15:535:0:0:0,-4.51545,-10 0/0:23.7894:3:3:114:0:0:0,-0.90309,-10 0/0:99:40:40:1465:0:0:0,-10,-10 0/0:41.8512:9:9:334:0:0:0,-2.70927,-10 0/0:77.9747:21:21:780:0:0:0,-6.32163,-10 0/0:20.7791:2:2:76:0:0:0,-0.60206,-7.22 0/0:56.9027:14:14:525:0:0:0,-4.21442,-10 0/0:50.8821:12:12:422:0:0:0,-3.61236,-10 0/0:80.9851:22:22:820:0:0:0,-6.62266,-10 0/0:80.9851:22:22:800:0:0:0,-6.62266,-10 0/0:99:28:28:965:0:0:0,-8.42884,-10 0/0:71.9541:19:19:697:0:0:0,-5.71957,-10 0/0:50.8821:12:12:435:0:0:0,-3.61236,-10 0/0:99:29:29:1043:0:0:0,-8.72987,-10 0/0:87.0057:24:24:870:0:0:0,-7.22472,-10 0/0:44.8615:10:10:370:0:0:0,-3.0103,-10 0/0:80.9851:22:22:780:0:0:0,-6.62266,-10 0/0:47.8718:11:11:403:0:0:0,-3.31133,-10 0/0:59.913:15:15:553:0:0:0,-4.51545,-10 0/0:99:30:30:1098:0:0:0,-9.0309,-10 0/0:56.9027:14:14:483:0:0:0,-4.21442,-10 0/0:26.7997:4:4:143:0:0:0,-1.20412,-10 0/0:93.0263:27:26:965:0:0:0,-7.82678,-10 0/0:38.8409:8:8:302:0:0:0,-2.40824,-10 0/0:56.9027:14:14:528:0:0:0,-4.21442,-10 0/0:56.9027:14:14:515:0:0:0,-4.21442,-10 0/0:29.81:5:5:167:0:0:0,-1.50515,-10 0/0:53.8924:13:13:442:0:0:0,-3.91339,-10 0/0:99:31:31:1103:0:0:0,-9.33193,-10 0/0:47.8367:27:26:949:1:38:0,-2.89645,-10 0/0:71.9541:19:19:703:0:0:0,-5.71957,-10 0/0:56.9027:14:14:500:0:0:0,-4.21442,-10 0/0:59.913:15:15:548:0:0:0,-4.51545,-10 0/0:20.7791:2:2:76:0:0:0,-0.60206,-7.22 0/0:65.9336:17:17:608:0:0:0,-5.11751,-10 0/0:50.8821:12:12:431:0:0:0,-3.61236,-10 0/0:32.8203:6:6:226:0:0:0,-1.80618,-10 0/0:74.9645:20:20:654:0:0:0,-6.0206,-10 0/0:53.8924:13:13:463:0:0:0,-3.91339,-10 0/0:62.9233:16:16:569:0:0:0,-4.81648,-10 scaffold_6 123070 . C T 535.288 . AB=0.666667;ABP=10.9724;AC=1;AF=0.00543478;AN=184;AO=23;CIGAR=1X;DP=1550;DPB=1550;DPRA=2.03304;EPP=3.86001;EPPR=8.65442;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9581;NS=92;NUMALT=1;ODDS=1.10546;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=811;QR=55745;RO=1527;RPP=52.9542;RPPR=3215.44;RUN=1;SAF=10;SAP=3.86001;SAR=13;SRF=740;SRP=6.15161;SRR=787;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.719:18:18:653:0:0:0,-5.41854,-10 0/0:23.616:8:8:301:0:0:0,-2.40824,-10 0/0:29.6366:10:10:350:0:0:0,-3.0103,-10 0/0:20.6057:7:7:240:0:0:0,-2.10721,-10 0/0:32.6469:11:11:398:0:0:0,-3.31133,-10 0/0:17.5954:6:6:206:0:0:0,-1.80618,-10 0/0:99:36:36:1311:0:0:0,-10,-10 0/0:77.8014:26:26:950:0:0:0,-7.82678,-10 0/0:38.6675:13:13:494:0:0:0,-3.91339,-10 0/0:14.5851:5:5:186:0:0:0,-1.50515,-10 0/0:23.616:8:8:302:0:0:0,-2.40824,-10 0/0:11.5748:4:4:145:0:0:0,-1.20412,-10 0/0:83.8219:28:28:996:0:0:0,-8.42884,-10 0/0:89.8421:30:30:1099:0:0:0,-9.0309,-10 0/0:77.8014:26:26:890:0:0:0,-7.82678,-10 0/0:68.7705:23:23:828:0:0:0,-6.92369,-10 0/0:53.719:18:18:674:0:0:0,-5.41854,-10 0/0:23.616:8:8:304:0:0:0,-2.40824,-10 0/0:44.6881:15:15:535:0:0:0,-4.51545,-10 0/0:73.7172:34:33:1240:1:16:0,-7.10354,-10 0/0:41.6778:14:14:503:0:0:0,-4.21442,-10 0/0:71.7808:24:24:903:0:0:0,-7.22472,-10 0/0:32.6469:11:11:406:0:0:0,-3.31133,-10 0/0:77.8014:26:26:933:0:0:0,-7.82678,-10 0/0:62.7499:21:21:774:0:0:0,-6.32163,-10 0/0:53.719:18:18:658:0:0:0,-5.41854,-10 0/0:41.6778:14:14:520:0:0:0,-4.21442,-10 0/0:29.6366:10:10:375:0:0:0,-3.0103,-10 0/0:83.8219:28:28:1026:0:0:0,-8.42884,-10 0/0:77.8014:26:26:978:0:0:0,-7.82678,-10 0/0:11.5748:4:4:132:0:0:0,-1.20412,-10 0/0:23.616:8:8:300:0:0:0,-2.40824,-10 0/0:62.7499:21:21:750:0:0:0,-6.32163,-10 0/0:26.6263:9:9:328:0:0:0,-2.70927,-10 0/0:35.6572:12:12:445:0:0:0,-3.61236,-10 0/0:35.6572:12:12:439:0:0:0,-3.61236,-10 0/0:44.6881:15:15:558:0:0:0,-4.51545,-10 0/0:62.7499:21:21:739:0:0:0,-6.32163,-10 0/0:59.7396:20:20:751:0:0:0,-6.0206,-10 0/0:35.6572:12:12:415:0:0:0,-3.61236,-10 0/0:59.7396:20:20:759:0:0:0,-6.0206,-10 0/0:44.6881:15:15:539:0:0:0,-4.51545,-10 0/0:56.7293:19:19:712:0:0:0,-5.71957,-10 0/1:99:33:11:373:22:795:-10,0,-10 0/0:56.7293:19:19:652:0:0:0,-5.71957,-10 0/0:50.7087:17:17:616:0:0:0,-5.11751,-10 0/0:92.8518:31:31:1123:0:0:0,-9.33193,-10 0/0:68.7705:23:23:868:0:0:0,-6.92369,-10 0/0:32.6469:11:11:396:0:0:0,-3.31133,-10 0/0:99:36:36:1285:0:0:0,-10,-10 0/0:26.6263:9:9:333:0:0:0,-2.70927,-10 0/0:83.8219:28:28:1032:0:0:0,-8.42884,-10 0/0:32.6469:11:11:414:0:0:0,-3.31133,-10 0/0:17.5954:6:6:206:0:0:0,-1.80618,-10 0/0:99:35:35:1292:0:0:0,-10,-10 0/0:50.7087:17:17:631:0:0:0,-5.11751,-10 0/0:44.6881:15:15:557:0:0:0,-4.51545,-10 0/0:14.5851:5:5:190:0:0:0,-1.50515,-10 0/0:38.6675:13:13:484:0:0:0,-3.91339,-10 0/0:35.6572:12:12:453:0:0:0,-3.61236,-10 0/0:56.7293:19:19:695:0:0:0,-5.71957,-10 0/0:38.6675:13:13:463:0:0:0,-3.91339,-10 0/0:98.8691:33:33:1210:0:0:0,-9.93399,-10 0/0:47.6984:16:16:569:0:0:0,-4.81648,-10 0/0:23.616:8:8:304:0:0:0,-2.40824,-10 0/0:56.7293:19:19:667:0:0:0,-5.71957,-10 0/0:32.6469:11:11:409:0:0:0,-3.31133,-10 0/0:23.616:8:8:299:0:0:0,-2.40824,-10 0/0:77.8014:26:26:944:0:0:0,-7.82678,-10 0/0:32.6469:11:11:412:0:0:0,-3.31133,-10 0/0:47.6984:16:16:590:0:0:0,-4.81648,-10 0/0:80.8117:27:27:962:0:0:0,-8.12781,-10 0/0:50.7087:17:17:595:0:0:0,-5.11751,-10 0/0:62.7499:21:21:767:0:0:0,-6.32163,-10 0/0:99:34:34:1264:0:0:0,-10,-10 0/0:35.6572:12:12:434:0:0:0,-3.61236,-10 0/0:38.6675:13:13:441:0:0:0,-3.91339,-10 0/0:23.616:8:8:297:0:0:0,-2.40824,-10 0/0:11.5748:4:4:130:0:0:0,-1.20412,-10 0/0:23.616:8:8:304:0:0:0,-2.40824,-10 0/0:92.8518:31:31:1114:0:0:0,-9.33193,-10 0/0:56.7293:19:19:720:0:0:0,-5.71957,-10 0/0:62.7499:21:21:787:0:0:0,-6.32163,-10 0/0:89.8421:30:30:1125:0:0:0,-9.0309,-10 0/0:65.7602:22:22:809:0:0:0,-6.62266,-10 0/0:11.5748:4:4:152:0:0:0,-1.20412,-10 0/0:47.6984:16:16:582:0:0:0,-4.81648,-10 0/0:35.6572:12:12:451:0:0:0,-3.61236,-10 0/0:8.56453:3:3:114:0:0:0,-0.90309,-10 0/0:29.6366:10:10:344:0:0:0,-3.0103,-10 0/0:35.6572:12:12:423:0:0:0,-3.61236,-10 0/0:32.6469:11:11:418:0:0:0,-3.31133,-10 scaffold_6 124498 . C T 542.073 . AB=0.6;ABP=6.05036;AC=1;AF=0.00543478;AN=184;AO=23;CIGAR=1X;DP=2218;DPB=2218;DPRA=1.28379;EPP=7.63648;EPPR=4.67632;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9521;NS=92;NUMALT=1;ODDS=5.43697;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=821;QR=79960;RO=2191;RPP=52.9542;RPPR=4743.35;RUN=1;SAF=8;SAP=7.63648;SAR=15;SRF=1118;SRP=5.01725;SRR=1073;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.79:14:14:478:0:0:0,-4.21442,-10 0/0:47.7591:11:11:393:0:0:0,-3.31133,-10 0/0:71.8414:19:19:700:0:0:0,-5.71957,-10 0/0:59.8003:15:15:557:0:0:0,-4.51545,-10 0/0:80.8724:22:22:782:0:0:0,-6.62266,-10 0/0:32.7076:6:6:216:0:0:0,-1.80618,-10 0/0:99:46:46:1675:0:0:0,-10,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:53.7797:13:13:486:0:0:0,-3.91339,-10 0/0:23.6767:3:3:114:0:0:0,-0.90309,-10 0/0:50.7694:12:12:448:0:0:0,-3.61236,-10 0/0:50.7694:12:12:439:0:0:0,-3.61236,-10 0/0:99:38:38:1360:0:0:0,-10,-10 0/0:99:37:36:1354:0:0:0,-10,-10 0/0:95.9208:27:27:1006:0:0:0,-8.12781,-10 0/0:92.912:26:26:967:0:0:0,-7.82678,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:50.7694:12:12:442:0:0:0,-3.61236,-10 0/0:92.912:26:26:949:0:0:0,-7.82678,-10 0/0:99:46:46:1731:0:0:0,-10,-10 0/0:86.8926:24:24:877:0:0:0,-7.22472,-10 0/0:99:48:48:1783:0:0:0,-10,-10 0/0:59.8003:15:15:513:0:0:0,-4.51545,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:83.8825:24:23:820:0:0:0,-6.92369,-10 0/0:99:37:37:1289:0:0:0,-10,-10 0/0:74.8518:20:20:733:0:0:0,-6.0206,-10 0/0:65.8209:17:17:645:0:0:0,-5.11751,-10 0/0:83.8825:23:23:865:0:0:0,-6.92369,-10 0/0:99:42:42:1545:0:0:0,-10,-10 0/0:32.7076:6:6:207:0:0:0,-1.80618,-10 0/0:50.7694:12:12:433:0:0:0,-3.61236,-10 0/0:99:30:30:1055:0:0:0,-9.0309,-10 0/0:74.8518:20:20:728:0:0:0,-6.0206,-10 0/0:68.8312:18:18:676:0:0:0,-5.41854,-10 0/0:23.6767:3:3:92:0:0:0,-0.90309,-8.58667 0/0:68.8312:18:18:677:0:0:0,-5.41854,-10 0/0:99:37:37:1323:0:0:0,-10,-10 0/0:95.9208:27:27:1000:0:0:0,-8.12781,-10 0/0:83.8825:23:23:850:0:0:0,-6.92369,-10 0/0:99:30:29:1089:0:0:0,-8.72987,-10 0/0:86.8926:24:24:869:0:0:0,-7.22472,-10 0/0:62.8106:16:16:595:0:0:0,-4.81648,-10 0/0:99:39:39:1433:0:0:0,-10,-10 0/0:71.8414:19:19:715:0:0:0,-5.71957,-10 0/0:59.8003:15:15:556:0:0:0,-4.51545,-10 0/0:99:55:55:1996:0:0:0,-10,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/0:77.8621:22:21:785:0:0:0,-6.32163,-10 0/0:95.9329:38:37:1341:1:16:0,-8.25936,-10 0/0:59.8003:15:15:566:0:0:0,-4.51545,-10 0/0:99:42:42:1392:0:0:0,-10,-10 0/0:68.8312:18:18:644:0:0:0,-5.41854,-10 0/0:56.79:14:14:521:0:0:0,-4.21442,-10 0/0:99:60:60:2211:0:0:0,-10,-10 0/0:62.8106:16:16:605:0:0:0,-4.81648,-10 0/0:77.8621:21:21:771:0:0:0,-6.32163,-10 0/0:44.7488:10:10:344:0:0:0,-3.0103,-10 0/0:92.912:26:26:950:0:0:0,-7.82678,-10 0/0:47.7591:11:11:372:0:0:0,-3.31133,-10 0/0:99:40:40:1453:0:0:0,-10,-10 0/0:71.8414:19:19:662:0:0:0,-5.71957,-10 0/0:99:37:37:1347:0:0:0,-10,-10 0/0:68.8312:18:18:657:0:0:0,-5.41854,-10 0/0:59.8003:15:15:548:0:0:0,-4.51545,-10 0/1:99:35:14:532:21:789:-10,0,-10 0/0:41.7506:19:18:667:1:16:0,-2.84082,-10 0/0:50.7694:12:12:431:0:0:0,-3.61236,-10 0/0:99:45:45:1619:0:0:0,-10,-10 0/0:89.9025:25:25:925:0:0:0,-7.52575,-10 0/0:77.8621:21:21:792:0:0:0,-6.32163,-10 0/0:99:33:33:1231:0:0:0,-9.93399,-10 0/0:99:32:32:1117:0:0:0,-9.63296,-10 0/0:83.8825:23:23:869:0:0:0,-6.92369,-10 0/0:99:55:55:1957:0:0:0,-10,-10 0/0:92.912:26:26:962:0:0:0,-7.82678,-10 0/0:74.8518:20:20:713:0:0:0,-6.0206,-10 0/0:59.8003:15:15:548:0:0:0,-4.51545,-10 0/0:23.6767:3:3:114:0:0:0,-0.90309,-10 0/0:56.79:14:14:528:0:0:0,-4.21442,-10 0/0:99:44:44:1627:0:0:0,-10,-10 0/0:99:31:31:1117:0:0:0,-9.33193,-10 0/0:99:30:30:1077:0:0:0,-9.0309,-10 0/0:71.8414:19:19:716:0:0:0,-5.71957,-10 0/0:98.928:28:28:1038:0:0:0,-8.42884,-10 0/0:35.7179:7:7:265:0:0:0,-2.10721,-10 0/0:71.8414:19:19:699:0:0:0,-5.71957,-10 0/0:68.8312:18:18:628:0:0:0,-5.41854,-10 0/0:35.7179:7:7:263:0:0:0,-2.10721,-10 0/0:80.8724:22:22:809:0:0:0,-6.62266,-10 0/0:83.8825:23:23:829:0:0:0,-6.92369,-10 0/0:62.8106:16:16:593:0:0:0,-4.81648,-10 scaffold_6 124527 . C A 1291.01 . AB=0.454545;ABP=3.99733;AC=3;AF=0.0163043;AN=184;AO=49;CIGAR=1X;DP=2222;DPB=2222;DPRA=1.57472;EPP=4.11819;EPPR=4.03405;GTI=0;LEN=1;MEANALT=1;MQM=59.3878;MQMR=59.9659;NS=92;NUMALT=1;ODDS=3.72179;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1816;QR=79155;RO=2172;RPP=109.412;RPPR=4693.43;RUN=1;SAF=22;SAP=4.11819;SAR=27;SRF=1099;SRP=3.68614;SRR=1073;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.626:14:14:527:0:0:0,-4.21442,-10 0/0:40.5951:11:11:402:0:0:0,-3.31133,-10 0/0:64.6775:19:19:675:0:0:0,-5.71957,-10 0/0:52.6363:15:15:547:0:0:0,-4.51545,-10 0/0:73.7084:22:22:781:0:0:0,-6.62266,-10 0/0:25.5436:6:6:228:0:0:0,-1.80618,-10 0/0:99:46:46:1645:0:0:0,-10,-10 0/0:99:33:33:1172:0:0:0,-9.93399,-10 0/0:46.6157:13:13:471:0:0:0,-3.91339,-10 0/0:16.5127:3:3:114:0:0:0,-0.90309,-10 0/0:43.6054:12:12:390:0:0:0,-3.61236,-10 0/0:43.6054:12:12:422:0:0:0,-3.61236,-10 0/0:99:37:37:1347:0:0:0,-10,-10 0/0:99:37:37:1377:0:0:0,-10,-10 0/0:88.7598:27:27:990:0:0:0,-8.12781,-10 0/0:88.7598:27:27:990:0:0:0,-8.12781,-10 0/0:94.78:29:29:1067:0:0:0,-8.72987,-10 0/0:43.6054:12:12:432:0:0:0,-3.61236,-10 0/0:85.7492:26:26:947:0:0:0,-7.82678,-10 0/0:99:47:47:1754:0:0:0,-10,-10 0/0:79.729:24:24:875:0:0:0,-7.22472,-10 0/0:99:48:48:1798:0:0:0,-10,-10 0/0:52.6363:15:15:558:0:0:0,-4.51545,-10 0/0:97.7898:30:30:1108:0:0:0,-9.0309,-10 0/0:79.729:24:24:869:0:0:0,-7.22472,-10 0/0:99:37:37:1267:0:0:0,-10,-10 0/0:67.6878:20:20:720:0:0:0,-6.0206,-10 0/0:58.6569:17:17:644:0:0:0,-5.11751,-10 0/0:76.7187:23:23:845:0:0:0,-6.92369,-10 0/0:99:42:42:1552:0:0:0,-10,-10 0/0:25.5436:6:6:223:0:0:0,-1.80618,-10 0/0:43.6054:12:12:455:0:0:0,-3.61236,-10 0/0:97.7898:30:30:1092:0:0:0,-9.0309,-10 0/0:67.6878:20:20:753:0:0:0,-6.0206,-10 0/0:61.6672:18:18:671:0:0:0,-5.41854,-10 0/0:16.5127:3:3:107:0:0:0,-0.90309,-9.98667 0/0:61.6672:18:18:658:0:0:0,-5.41854,-10 0/0:99:37:37:1299:0:0:0,-10,-10 0/0:88.7598:27:27:986:0:0:0,-8.12781,-10 0/0:76.7187:23:23:865:0:0:0,-6.92369,-10 0/0:97.7898:30:30:1136:0:0:0,-9.0309,-10 0/0:79.729:24:24:874:0:0:0,-7.22472,-10 0/0:55.6466:16:16:599:0:0:0,-4.81648,-10 0/0:99:39:39:1432:0:0:0,-10,-10 0/0:64.6775:19:19:705:0:0:0,-5.71957,-10 0/0:52.6363:15:15:562:0:0:0,-4.51545,-10 0/0:99:54:54:1980:0:0:0,-10,-10 0/0:99:33:33:1218:0:0:0,-9.93399,-10 0/0:70.6981:22:21:782:0:0:0,-6.32163,-10 0/0:99:38:38:1405:0:0:0,-10,-10 0/0:52.6363:15:15:551:0:0:0,-4.51545,-10 0/0:99:42:42:1438:0:0:0,-10,-10 0/0:61.6672:18:18:678:0:0:0,-5.41854,-10 0/0:49.626:14:14:527:0:0:0,-4.21442,-10 0/0:99:59:59:2158:0:0:0,-10,-10 0/0:55.6466:16:16:586:0:0:0,-4.81648,-10 0/0:70.6981:21:21:771:0:0:0,-6.32163,-10 0/0:37.5848:10:10:359:0:0:0,-3.0103,-10 0/0:85.7492:26:26:936:0:0:0,-7.82678,-10 0/0:40.5951:11:11:379:0:0:0,-3.31133,-10 0/0:99:40:40:1464:0:0:0,-10,-10 0/0:64.6775:19:19:640:0:0:0,-5.71957,-10 0/0:99:38:38:1405:0:0:0,-10,-10 0/0:61.6672:18:18:657:0:0:0,-5.41854,-10 0/0:52.6363:15:15:540:0:0:0,-4.51545,-10 0/0:99:37:37:1370:0:0:0,-10,-10 0/0:64.6775:19:19:690:0:0:0,-5.71957,-10 0/0:43.6054:12:12:420:0:0:0,-3.61236,-10 0/0:99:46:46:1651:0:0:0,-10,-10 0/0:82.7391:25:25:920:0:0:0,-7.52575,-10 0/0:70.6981:21:21:778:0:0:0,-6.32163,-10 0/0:82.4353:34:33:1204:1:16:0,-7.10354,-10 0/0:99:32:32:1137:0:0:0,-9.63296,-10 1/1:29.0592:23:0:0:23:868:-10,-6.92369,0 0/1:99:55:30:1067:25:932:-10,0,-10 0/0:85.7492:26:26:933:0:0:0,-7.82678,-10 0/0:67.6878:20:20:671:0:0:0,-6.0206,-10 0/0:52.6363:15:15:532:0:0:0,-4.51545,-10 0/0:16.5127:3:3:114:0:0:0,-0.90309,-10 0/0:49.626:14:14:494:0:0:0,-4.21442,-10 0/0:99:44:44:1623:0:0:0,-10,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:99:31:31:1156:0:0:0,-9.33193,-10 0/0:64.6775:19:19:710:0:0:0,-5.71957,-10 0/0:94.78:29:29:1093:0:0:0,-8.72987,-10 0/0:28.5539:7:7:266:0:0:0,-2.10721,-10 0/0:64.6775:19:19:675:0:0:0,-5.71957,-10 0/0:61.6672:18:18:649:0:0:0,-5.41854,-10 0/0:28.5539:7:7:256:0:0:0,-2.10721,-10 0/0:73.7084:22:22:784:0:0:0,-6.62266,-10 0/0:76.7187:23:23:843:0:0:0,-6.92369,-10 0/0:55.6466:16:16:579:0:0:0,-4.81648,-10 scaffold_6 205565 . C T 498.555 . AB=0.628571;ABP=8.03571;AC=2;AF=0.0108696;AN=184;AO=22;CIGAR=1X;DP=1088;DPB=1088;DPRA=1.49573;EPP=17.2236;EPPR=3.53178;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9484;NS=92;NUMALT=1;ODDS=2.8668;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=806;QR=38872;RO=1066;RPP=42.4916;RPPR=2138.99;RUN=1;SAF=18;SAP=22.3561;SAR=4;SRF=546;SRP=4.38733;SRR=520;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.2961:10:10:378:0:0:0,-3.0103,-10 0/0:31.2652:7:7:266:0:0:0,-2.10721,-10 0/0:64.3785:18:18:681:0:0:0,-5.41854,-10 0/0:37.2858:9:9:339:0:0:0,-2.70927,-10 0/0:40.2961:10:10:377:0:0:0,-3.0103,-10 0/0:37.2858:9:9:342:0:0:0,-2.70927,-10 0/0:64.3785:18:18:656:0:0:0,-5.41854,-10 0/0:70.3991:20:20:717:0:0:0,-6.0206,-10 0/0:34.2755:8:8:302:0:0:0,-2.40824,-10 0/0:16.2137:2:2:76:0:0:0,-0.60206,-7.22 0/0:25.2446:5:5:168:0:0:0,-1.50515,-10 0/0:46.3167:12:12:410:0:0:0,-3.61236,-10 0/0:49.327:13:13:425:0:0:0,-3.91339,-10 0/0:79.43:23:23:840:0:0:0,-6.92369,-10 0/0:70.3991:20:20:734:0:0:0,-6.0206,-10 0/0:49.327:13:13:482:0:0:0,-3.91339,-10 0/0:58.3579:16:16:553:0:0:0,-4.81648,-10 0/0:34.2755:8:8:292:0:0:0,-2.40824,-10 0/0:43.3064:11:11:394:0:0:0,-3.31133,-10 0/0:61.3682:17:17:622:0:0:0,-5.11751,-10 0/0:43.3064:11:11:414:0:0:0,-3.31133,-10 0/0:88.4607:26:26:966:0:0:0,-7.82678,-10 0/0:25.2446:5:5:190:0:0:0,-1.50515,-10 0/0:34.2755:8:8:290:0:0:0,-2.40824,-10 0/0:37.2858:9:9:341:0:0:0,-2.70927,-10 0/0:43.3064:11:11:418:0:0:0,-3.31133,-10 0/0:43.3064:11:11:373:0:0:0,-3.31133,-10 0/0:31.2652:7:7:266:0:0:0,-2.10721,-10 0/1:0.00387582:10:0:0:10:351:-10,-3.0103,0 0/0:46.3167:12:12:456:0:0:0,-3.61236,-10 0/0:25.2446:5:5:188:0:0:0,-1.50515,-10 0/0:37.2858:9:9:308:0:0:0,-2.70927,-10 0/0:55.3476:15:15:530:0:0:0,-4.51545,-10 0/0:28.2549:6:6:182:0:0:0,-1.80618,-10 0/0:55.3476:15:15:563:0:0:0,-4.51545,-10 0/0:13.2034:1:1:27:0:0:0,-0.30103,-2.7 0/0:46.3167:12:12:438:0:0:0,-3.61236,-10 0/0:70.3991:20:20:757:0:0:0,-6.0206,-10 0/0:34.2755:8:8:303:0:0:0,-2.40824,-10 0/0:43.3064:11:11:409:0:0:0,-3.31133,-10 0/0:52.3373:14:14:504:0:0:0,-4.21442,-10 0/0:49.327:13:13:483:0:0:0,-3.91339,-10 0/0:34.2755:8:8:279:0:0:0,-2.40824,-10 0/0:67.3888:19:19:722:0:0:0,-5.71957,-10 0/0:55.3476:15:15:554:0:0:0,-4.51545,-10 0/0:37.2858:9:9:315:0:0:0,-2.70927,-10 0/0:79.43:23:23:872:0:0:0,-6.92369,-10 0/0:76.4197:22:22:825:0:0:0,-6.62266,-10 0/0:40.2961:10:10:370:0:0:0,-3.0103,-10 0/0:64.3785:18:18:615:0:0:0,-5.41854,-10 0/0:37.2858:9:9:316:0:0:0,-2.70927,-10 0/0:61.3682:17:17:601:0:0:0,-5.11751,-10 0/0:31.2652:7:7:259:0:0:0,-2.10721,-10 0/0:19.224:3:3:108:0:0:0,-0.90309,-10 0/0:70.3991:20:20:736:0:0:0,-6.0206,-10 0/0:19.224:3:3:114:0:0:0,-0.90309,-10 0/0:43.3064:11:11:386:0:0:0,-3.31133,-10 0/0:31.2652:7:7:255:0:0:0,-2.10721,-10 0/0:40.2961:10:10:378:0:0:0,-3.0103,-10 0/0:28.2549:6:6:220:0:0:0,-1.80618,-10 0/0:61.3682:17:17:601:0:0:0,-5.11751,-10 0/0:37.2858:9:9:342:0:0:0,-2.70927,-10 0/1:99:25:13:447:12:455:-10,0,-10 0/0:49.327:13:13:469:0:0:0,-3.91339,-10 0/0:28.2549:6:6:222:0:0:0,-1.80618,-10 0/0:46.3167:12:12:455:0:0:0,-3.61236,-10 0/0:64.3785:18:18:658:0:0:0,-5.41854,-10 0/0:28.2549:6:6:216:0:0:0,-1.80618,-10 0/0:58.3579:16:16:584:0:0:0,-4.81648,-10 0/0:40.2961:10:10:379:0:0:0,-3.0103,-10 0/0:82.4403:24:24:866:0:0:0,-7.22472,-10 0/0:61.3682:17:17:631:0:0:0,-5.11751,-10 0/0:49.327:13:13:474:0:0:0,-3.91339,-10 0/0:31.2652:7:7:262:0:0:0,-2.10721,-10 0/0:73.4094:21:21:748:0:0:0,-6.32163,-10 0/0:43.3064:11:11:400:0:0:0,-3.31133,-10 0/0:49.327:13:13:473:0:0:0,-3.91339,-10 0/0:28.2549:6:6:202:0:0:0,-1.80618,-10 0/0:19.224:3:3:92:0:0:0,-0.90309,-8.58667 0/0:16.2137:2:2:76:0:0:0,-0.60206,-7.22 0/0:82.4403:24:24:837:0:0:0,-7.22472,-10 0/0:52.3373:14:14:514:0:0:0,-4.21442,-10 0/0:37.2858:9:9:339:0:0:0,-2.70927,-10 0/0:40.2961:10:10:377:0:0:0,-3.0103,-10 0/0:49.327:13:13:493:0:0:0,-3.91339,-10 0/0:37.2858:9:9:317:0:0:0,-2.70927,-10 0/0:34.2755:8:8:282:0:0:0,-2.40824,-10 0/0:31.2652:7:7:266:0:0:0,-2.10721,-10 0/0:34.2755:8:8:304:0:0:0,-2.40824,-10 0/0:40.2961:10:10:371:0:0:0,-3.0103,-10 0/0:52.3373:14:14:527:0:0:0,-4.21442,-10 0/0:34.2755:8:8:263:0:0:0,-2.40824,-10 scaffold_6 278319 . A G 658.946 . AB=0.783784;ABP=28.8919;AC=2;AF=0.0108696;AN=184;AO=29;CIGAR=1X;DP=1490;DPB=1490;DPRA=1.14591;EPP=15.6647;EPPR=3.04746;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=2.89801;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1034;QR=53661;RO=1461;RPP=65.983;RPPR=3175.53;RUN=1;SAF=21;SAP=15.6647;SAR=8;SRF=728;SRP=3.04746;SRR=733;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.4376:13:13:490:0:0:0,-3.91339,-10 0/0:28.3758:7:7:261:0:0:0,-2.10721,-10 0/0:46.4376:13:13:439:0:0:0,-3.91339,-10 0/0:31.3861:8:8:304:0:0:0,-2.40824,-10 0/0:37.4067:10:10:374:0:0:0,-3.0103,-10 0/0:19.3449:4:4:151:0:0:0,-1.20412,-10 0/0:99:32:32:1172:0:0:0,-9.63296,-10 0/0:79.5509:24:24:898:0:0:0,-7.22472,-10 0/0:31.3861:8:8:292:0:0:0,-2.40824,-10 0/0:19.3449:4:4:152:0:0:0,-1.20412,-10 0/0:19.3449:4:4:151:0:0:0,-1.20412,-10 0/0:22.3552:5:5:182:0:0:0,-1.50515,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:79.5509:24:24:895:0:0:0,-7.22472,-10 0/0:85.5714:26:26:933:0:0:0,-7.82678,-10 0/0:58.4788:17:17:620:0:0:0,-5.11751,-10 0/0:43.4273:12:12:452:0:0:0,-3.61236,-10 0/0:40.417:11:11:409:0:0:0,-3.31133,-10 0/0:61.4891:18:18:684:0:0:0,-5.41854,-10 0/0:99:31:31:1118:0:0:0,-9.33193,-10 0/0:79.5509:24:24:883:0:0:0,-7.22472,-10 0/1:99:24:8:280:16:575:-10,0,-10 0/0:37.4067:10:10:376:0:0:0,-3.0103,-10 0/0:61.4891:18:18:643:0:0:0,-5.41854,-10 0/0:91.5915:28:28:988:0:0:0,-8.42884,-10 0/0:58.4788:17:17:634:0:0:0,-5.11751,-10 0/0:52.4582:15:15:504:0:0:0,-4.51545,-10 0/0:34.3964:9:9:339:0:0:0,-2.70927,-10 0/0:76.5406:23:23:847:0:0:0,-6.92369,-10 0/0:76.5406:23:23:859:0:0:0,-6.92369,-10 0/0:25.3655:6:6:218:0:0:0,-1.80618,-10 0/0:19.3449:4:4:152:0:0:0,-1.20412,-10 0/1:0.0607061:13:0:0:13:459:-10,-3.91339,0 0/0:37.4067:10:10:371:0:0:0,-3.0103,-10 0/0:43.4273:12:12:447:0:0:0,-3.61236,-10 0/0:13.3243:2:2:76:0:0:0,-0.60206,-7.22 0/0:25.3655:6:6:228:0:0:0,-1.80618,-10 0/0:79.5509:24:24:870:0:0:0,-7.22472,-10 0/0:34.3964:9:9:319:0:0:0,-2.70927,-10 0/0:34.3964:9:9:340:0:0:0,-2.70927,-10 0/0:91.5915:28:28:1039:0:0:0,-8.42884,-10 0/0:64.4994:19:19:717:0:0:0,-5.71957,-10 0/0:55.4685:16:16:604:0:0:0,-4.81648,-10 0/0:73.5303:22:22:806:0:0:0,-6.62266,-10 0/0:55.4685:16:16:599:0:0:0,-4.81648,-10 0/0:55.4685:16:16:604:0:0:0,-4.81648,-10 0/0:99:38:38:1434:0:0:0,-10,-10 0/0:79.5509:24:24:912:0:0:0,-7.22472,-10 0/0:46.4376:13:13:490:0:0:0,-3.91339,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:34.3964:9:9:318:0:0:0,-2.70927,-10 0/0:99:31:31:1173:0:0:0,-9.33193,-10 0/0:34.3964:9:9:338:0:0:0,-2.70927,-10 0/0:19.3449:4:4:149:0:0:0,-1.20412,-10 0/0:99:37:37:1330:0:0:0,-10,-10 0/0:28.3758:7:7:262:0:0:0,-2.10721,-10 0/0:61.4891:18:18:677:0:0:0,-5.41854,-10 0/0:40.417:11:11:411:0:0:0,-3.31133,-10 0/0:67.5097:20:20:704:0:0:0,-6.0206,-10 0/0:76.5406:23:23:855:0:0:0,-6.92369,-10 0/0:79.5509:24:24:858:0:0:0,-7.22472,-10 0/0:58.4788:17:17:598:0:0:0,-5.11751,-10 0/0:94.6012:29:29:1095:0:0:0,-8.72987,-10 0/0:46.4376:13:13:468:0:0:0,-3.91339,-10 0/0:34.3964:9:9:336:0:0:0,-2.70927,-10 0/0:76.5406:23:23:850:0:0:0,-6.92369,-10 0/0:73.5303:22:22:804:0:0:0,-6.62266,-10 0/0:40.417:11:11:416:0:0:0,-3.31133,-10 0/0:79.5509:24:24:893:0:0:0,-7.22472,-10 0/0:25.3655:6:6:226:0:0:0,-1.80618,-10 0/0:55.4685:16:16:603:0:0:0,-4.81648,-10 0/0:97.6046:30:30:1115:0:0:0,-9.0309,-10 0/0:49.4479:14:14:497:0:0:0,-4.21442,-10 0/0:61.4891:18:18:654:0:0:0,-5.41854,-10 0/0:70.52:21:21:766:0:0:0,-6.32163,-10 0/0:34.3964:9:9:336:0:0:0,-2.70927,-10 0/0:37.4067:10:10:380:0:0:0,-3.0103,-10 0/0:37.4067:10:10:378:0:0:0,-3.0103,-10 0/0:25.3655:6:6:195:0:0:0,-1.80618,-10 0/0:46.4376:13:13:475:0:0:0,-3.91339,-10 0/0:82.5611:25:25:895:0:0:0,-7.52575,-10 0/0:67.5097:20:20:684:0:0:0,-6.0206,-10 0/0:52.4582:15:15:568:0:0:0,-4.51545,-10 0/0:43.4273:12:12:450:0:0:0,-3.61236,-10 0/0:61.4891:18:18:674:0:0:0,-5.41854,-10 0/0:22.3552:5:5:190:0:0:0,-1.50515,-10 0/0:67.5097:20:20:726:0:0:0,-6.0206,-10 0/0:49.4479:14:14:517:0:0:0,-4.21442,-10 0/0:22.3552:5:5:165:0:0:0,-1.50515,-10 0/0:37.4067:10:10:358:0:0:0,-3.0103,-10 0/0:73.5303:22:22:761:0:0:0,-6.62266,-10 0/0:37.4067:10:10:357:0:0:0,-3.0103,-10 scaffold_6 334134 . G A 8429.69 . AB=0.506211;ABP=3.1182;AC=28;AF=0.152174;AN=184;AO=307;CIGAR=1X;DP=1842;DPB=1842;DPRA=1.2875;EPP=5.05445;EPPR=3.69543;GTI=1;LEN=1;MEANALT=1.04762;MQM=59.759;MQMR=59.9615;NS=92;NUMALT=1;ODDS=0.864014;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11203;QR=55833;RO=1534;RPP=669.652;RPPR=3308.04;RUN=1;SAF=162;SAP=5.05445;SAR=145;SRF=779;SRP=3.82566;SRR=755;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.0628:18:18:641:0:0:0,-5.41854,-10 0/0:23.9495:7:7:258:0:0:0,-2.10721,-10 0/0:63.0834:20:20:716:0:0:0,-6.0206,-10 0/0:35.9907:11:11:413:0:0:0,-3.31133,-10 0/0:51.0422:16:16:576:0:0:0,-4.81648,-10 0/1:1.13607:8:0:0:7:258:-10,-2.10721,0 0/1:99:43:14:510:29:1028:-10,0,-10 0/0:63.0834:20:20:725:0:0:0,-6.0206,-10 1/1:17.7472:12:0:0:12:431:-10,-3.61236,0 0/0:14.9186:4:4:152:0:0:0,-1.20412,-10 0/0:23.9495:7:7:240:0:0:0,-2.10721,-10 0/0:29.9701:9:9:316:0:0:0,-2.70927,-10 0/0:66.0937:21:21:786:0:0:0,-6.32163,-10 0/0:99:39:39:1391:0:0:0,-10,-10 0/0:84.1553:27:27:942:0:0:0,-8.12781,-10 1/1:44.8399:21:0:0:21:795:-10,-6.32163,0 0/1:99:24:7:266:17:632:-10,0,-10 0/0:29.9701:9:9:327:0:0:0,-2.70927,-10 0/1:99:19:9:338:10:347:-10,0,-10 0/0:99:38:38:1377:0:0:0,-10,-10 0/0:69.104:22:22:775:0:0:0,-6.62266,-10 0/1:99:27:14:515:13:478:-10,0,-10 0/0:51.0422:16:16:601:0:0:0,-4.81648,-10 0/0:57.0628:18:18:677:0:0:0,-5.41854,-10 0/0:75.1246:24:24:794:0:0:0,-7.22472,-10 0/0:87.1654:28:28:1042:0:0:0,-8.42884,-10 0/0:54.0525:17:17:636:0:0:0,-5.11751,-10 0/0:48.0319:15:15:570:0:0:0,-4.51545,-10 1/1:53.8708:24:0:0:24:903:-10,-7.22472,0 0/0:99:33:33:1218:0:0:0,-9.93399,-10 0/0:17.9289:5:5:166:0:0:0,-1.50515,-10 0/0:17.9289:5:5:190:0:0:0,-1.50515,-10 1/1:38.8193:19:0:0:19:692:-10,-5.71957,0 0/0:35.9907:11:11:412:0:0:0,-3.31133,-10 0/0:87.1654:28:28:1005:0:0:0,-8.42884,-10 0/0:20.9392:6:6:222:0:0:0,-1.80618,-10 0/0:54.0525:17:17:583:0:0:0,-5.11751,-10 0/0:69.104:22:22:812:0:0:0,-6.62266,-10 0/0:57.0628:18:18:654:0:0:0,-5.41854,-10 0/0:35.9907:11:11:413:0:0:0,-3.31133,-10 0/0:57.0628:18:18:649:0:0:0,-5.41854,-10 0/0:51.0422:16:16:571:0:0:0,-4.81648,-10 0/0:48.0319:15:15:555:0:0:0,-4.51545,-10 0/1:99:34:21:788:13:469:-10,0,-10 0/0:69.104:22:22:780:0:0:0,-6.62266,-10 0/0:54.0525:17:17:617:0:0:0,-5.11751,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:14.9186:4:4:129:0:0:0,-1.20412,-10 0/0:99:47:47:1718:0:0:0,-10,-10 0/0:23.9495:7:7:254:0:0:0,-2.10721,-10 0/0:99:37:37:1340:0:0:0,-10,-10 0/0:63.0834:20:20:731:0:0:0,-6.0206,-10 0/0:26.9598:8:8:293:0:0:0,-2.40824,-10 0/0:99:38:38:1400:0:0:0,-10,-10 0/0:57.0628:18:18:658:0:0:0,-5.41854,-10 0/0:54.0525:17:17:601:0:0:0,-5.11751,-10 0/0:17.9289:5:5:185:0:0:0,-1.50515,-10 0/0:45.0216:14:14:528:0:0:0,-4.21442,-10 0/0:42.0113:13:13:483:0:0:0,-3.91339,-10 0/1:99:35:16:560:19:718:-10,0,-10 0/0:63.0834:20:20:722:0:0:0,-6.0206,-10 0/1:99:33:21:765:12:425:-10,0,-10 1/1:35.809:18:0:0:18:644:-10,-5.41854,0 0/0:54.0525:17:17:616:0:0:0,-5.11751,-10 0/0:99:32:32:1162:0:0:0,-9.63296,-10 0/0:69.104:22:22:825:0:0:0,-6.62266,-10 1/1:26.7781:15:0:0:15:545:-10,-4.51545,0 0/1:99:39:26:907:13:481:-10,0,-10 1/1:32.7987:17:0:0:17:604:-10,-5.11751,0 0/0:39.001:12:12:444:0:0:0,-3.61236,-10 0/0:99:32:32:1167:0:0:0,-9.63296,-10 0/0:93.1866:30:30:1123:0:0:0,-9.0309,-10 0/0:42.0113:13:13:446:0:0:0,-3.91339,-10 0/0:99:34:34:1225:0:0:0,-10,-10 1/1:32.7987:17:0:0:17:630:-10,-5.11751,0 0/0:48.0319:15:15:556:0:0:0,-4.51545,-10 0/0:39.001:12:12:446:0:0:0,-3.61236,-10 0/0:32.9804:10:10:346:0:0:0,-3.0103,-10 0/0:42.0113:13:13:451:0:0:0,-3.91339,-10 0/0:99:46:46:1680:0:0:0,-10,-10 0/0:80.7461:43:42:1577:1:38:0,-7.51082,-10 0/0:66.0937:21:21:792:0:0:0,-6.32163,-10 0/0:51.0422:16:16:602:0:0:0,-4.81648,-10 0/1:99:24:10:374:14:532:-10,0,-10 0/0:11.9083:3:3:105:0:0:0,-0.90309,-9.8 0/0:54.0525:17:17:607:0:0:0,-5.11751,-10 0/0:48.0319:15:15:548:0:0:0,-4.51545,-10 0/1:99:11:5:166:6:205:-10,0,-10 0/0:48.0319:15:15:565:0:0:0,-4.51545,-10 0/1:99:25:15:555:10:348:-10,0,-10 0/0:42.0113:13:13:472:0:0:0,-3.91339,-10 scaffold_6 334173 . C T 311.846 . AB=0.433333;ABP=4.16842;AC=1;AF=0.00543478;AN=184;AO=14;CIGAR=1X;DP=1834;DPB=1834;DPRA=0.85;EPP=5.49198;EPPR=4.2334;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9224;NS=92;NUMALT=1;ODDS=4.45917;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=495;QR=66455;RO=1818;RPP=33.4109;RPPR=3942.07;RUN=1;SAF=5;SAP=5.49198;SAR=9;SRF=924;SRP=4.08529;SRR=894;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:84.0243:18:18:678:0:0:0,-5.41854,-10 0/0:50.9113:7:7:254:0:0:0,-2.10721,-10 0/0:90.045:20:20:717:0:0:0,-6.0206,-10 0/0:62.9525:11:11:416:0:0:0,-3.31133,-10 0/0:78.004:16:16:606:0:0:0,-4.81648,-10 0/0:53.9216:8:8:286:0:0:0,-2.40824,-10 0/0:99:43:42:1500:0:0:0,-10,-10 0/0:90.045:20:20:736:0:0:0,-6.0206,-10 0/0:65.9628:12:12:433:0:0:0,-3.61236,-10 0/0:41.8804:4:4:152:0:0:0,-1.20412,-10 0/0:50.9113:7:7:248:0:0:0,-2.10721,-10 0/0:56.9319:9:9:326:0:0:0,-2.70927,-10 0/0:93.0532:21:21:783:0:0:0,-6.32163,-10 0/0:99:39:39:1443:0:0:0,-10,-10 0/0:99:27:27:948:0:0:0,-8.12781,-10 0/0:93.0532:21:21:795:0:0:0,-6.32163,-10 0/0:96.0612:22:22:804:0:0:0,-6.62266,-10 0/0:56.9319:9:9:312:0:0:0,-2.70927,-10 0/0:87.0343:19:19:695:0:0:0,-5.71957,-10 0/0:99:38:38:1390:0:0:0,-10,-10 0/0:96.0612:22:22:820:0:0:0,-6.62266,-10 0/0:99:27:27:991:0:0:0,-8.12781,-10 0/0:78.004:16:16:591:0:0:0,-4.81648,-10 0/0:84.0243:18:18:665:0:0:0,-5.41854,-10 0/0:99:24:24:864:0:0:0,-7.22472,-10 0/0:99:27:27:1000:0:0:0,-8.12781,-10 0/0:81.0141:17:17:634:0:0:0,-5.11751,-10 0/0:74.9936:15:15:543:0:0:0,-4.51545,-10 0/0:99:24:24:884:0:0:0,-7.22472,-10 0/0:99:33:33:1177:0:0:0,-9.93399,-10 0/0:44.8907:5:5:185:0:0:0,-1.50515,-10 0/0:44.8907:5:5:185:0:0:0,-1.50515,-10 0/0:87.0343:19:19:659:0:0:0,-5.71957,-10 0/0:65.9628:12:12:450:0:0:0,-3.61236,-10 0/0:99:27:27:962:0:0:0,-8.12781,-10 0/0:47.901:6:6:227:0:0:0,-1.80618,-10 0/0:81.0141:17:17:614:0:0:0,-5.11751,-10 0/0:96.0612:22:22:829:0:0:0,-6.62266,-10 0/0:84.0243:18:18:678:0:0:0,-5.41854,-10 0/0:62.9525:11:11:390:0:0:0,-3.31133,-10 0/0:84.0243:18:18:645:0:0:0,-5.41854,-10 0/0:78.004:16:16:603:0:0:0,-4.81648,-10 0/0:74.9936:15:15:526:0:0:0,-4.51545,-10 0/0:99:34:34:1281:0:0:0,-10,-10 0/0:93.0532:21:21:762:0:0:0,-6.32163,-10 0/0:81.0141:17:17:618:0:0:0,-5.11751,-10 0/0:99:33:33:1214:0:0:0,-9.93399,-10 0/0:99:35:34:1235:0:0:0,-10,-10 0/0:0.0499503:4:3:104:1:15:-0.89794,0,-9.10461 0/0:99:46:46:1730:0:0:0,-10,-10 0/0:50.9113:7:7:239:0:0:0,-2.10721,-10 0/0:99:36:36:1308:0:0:0,-10,-10 0/0:90.045:20:20:745:0:0:0,-6.0206,-10 0/0:53.9216:8:8:295:0:0:0,-2.40824,-10 0/0:99:38:38:1384:0:0:0,-10,-10 0/0:87.0343:19:19:692:0:0:0,-5.71957,-10 0/0:81.0141:17:17:600:0:0:0,-5.11751,-10 0/0:44.8907:5:5:183:0:0:0,-1.50515,-10 0/0:68.9731:13:13:486:0:0:0,-3.91339,-10 0/0:68.9731:13:13:481:0:0:0,-3.91339,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:90.045:20:20:717:0:0:0,-6.0206,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:84.0243:18:18:668:0:0:0,-5.41854,-10 0/0:81.0141:17:17:609:0:0:0,-5.11751,-10 0/0:99:32:32:1155:0:0:0,-9.63296,-10 0/0:96.0612:22:22:823:0:0:0,-6.62266,-10 0/0:71.9834:14:14:474:0:0:0,-4.21442,-10 0/0:99:39:39:1408:0:0:0,-10,-10 0/0:81.0141:17:17:611:0:0:0,-5.11751,-10 0/0:65.9628:12:12:421:0:0:0,-3.61236,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/1:99:30:17:636:13:480:-10,0,-10 0/0:68.9731:13:13:491:0:0:0,-3.91339,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:81.0141:17:17:640:0:0:0,-5.11751,-10 0/0:74.9936:15:15:541:0:0:0,-4.51545,-10 0/0:65.9628:12:12:445:0:0:0,-3.61236,-10 0/0:59.9422:10:10:367:0:0:0,-3.0103,-10 0/0:68.9731:13:13:482:0:0:0,-3.91339,-10 0/0:99:46:46:1697:0:0:0,-10,-10 0/0:99:43:43:1600:0:0:0,-10,-10 0/0:93.0532:21:21:794:0:0:0,-6.32163,-10 0/0:74.9936:15:15:541:0:0:0,-4.51545,-10 0/0:99:24:24:884:0:0:0,-7.22472,-10 0/0:38.8701:3:3:114:0:0:0,-0.90309,-10 0/0:81.0141:17:17:635:0:0:0,-5.11751,-10 0/0:74.9936:15:15:541:0:0:0,-4.51545,-10 0/0:62.9525:11:11:413:0:0:0,-3.31133,-10 0/0:74.9936:15:15:566:0:0:0,-4.51545,-10 0/0:99:25:25:862:0:0:0,-7.52575,-10 0/0:68.9731:13:13:434:0:0:0,-3.91339,-10 scaffold_6 780071 . A C 487.67 . AB=0.512821;ABP=3.06598;AC=1;AF=0.00543478;AN=184;AO=20;CIGAR=1X;DP=2021;DPB=2021;DPRA=1.79062;EPP=3.0103;EPPR=10.6789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9394;NS=92;NUMALT=1;ODDS=4.37944;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=705;QR=73285;RO=1998;RPP=46.4397;RPPR=4306.94;RUN=1;SAF=10;SAP=3.0103;SAR=10;SRF=961;SRP=9.28779;SRR=1037;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.3171:20:20:704:0:0:0,-6.0206,-10 0/0:40.2039:9:9:341:0:0:0,-2.70927,-10 0/0:79.3377:22:22:823:0:0:0,-6.62266,-10 0/0:58.2657:15:15:542:0:0:0,-4.51545,-10 0/0:61.2759:16:16:577:0:0:0,-4.81648,-10 0/0:37.1936:8:8:302:0:0:0,-2.40824,-10 0/1:99:39:19:712:20:705:-10,0,-10 0/0:99:36:36:1348:0:0:0,-10,-10 0/0:67.2965:18:18:653:0:0:0,-5.41854,-10 0/0:22.1421:3:3:114:0:0:0,-0.90309,-10 0/0:49.2348:12:12:451:0:0:0,-3.61236,-10 0/0:40.2039:9:9:327:0:0:0,-2.70927,-10 0/0:99:44:44:1631:0:0:0,-10,-10 0/0:99:41:41:1480:0:0:0,-10,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:99:31:31:1162:0:0:0,-9.33193,-10 0/0:94.3888:27:27:966:0:0:0,-8.12781,-10 0/0:55.2554:14:14:524:0:0:0,-4.21442,-10 0/0:97.3987:28:28:1016:0:0:0,-8.42884,-10 0/0:99:41:41:1497:0:0:0,-10,-10 0/0:79.3377:22:22:814:0:0:0,-6.62266,-10 0/0:99:30:30:1130:0:0:0,-9.0309,-10 0/0:46.2245:11:11:398:0:0:0,-3.31133,-10 0/0:76.3274:21:21:788:0:0:0,-6.32163,-10 0/0:88.3679:25:25:924:0:0:0,-7.52575,-10 0/0:99:38:38:1416:0:0:0,-10,-10 0/0:64.2863:17:17:573:0:0:0,-5.11751,-10 0/0:67.2965:18:18:671:0:0:0,-5.41854,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:99:37:37:1355:0:0:0,-10,-10 0/0:31.173:7:6:224:0:0:0,-1.80618,-10 0/0:19.1318:2:2:76:0:0:0,-0.60206,-7.22 0/0:67.2965:18:18:647:0:0:0,-5.41854,-10 0/0:43.2142:10:10:343:0:0:0,-3.0103,-10 0/0:67.2965:18:18:670:0:0:0,-5.41854,-10 0/0:61.2759:16:16:592:0:0:0,-4.81648,-10 0/0:37.1936:8:8:282:0:0:0,-2.40824,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:58.2657:15:15:562:0:0:0,-4.51545,-10 0/0:49.2348:12:12:426:0:0:0,-3.61236,-10 0/0:99:41:41:1541:0:0:0,-10,-10 0/0:70.3068:19:19:713:0:0:0,-5.71957,-10 0/0:88.3679:25:25:905:0:0:0,-7.52575,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:88.3679:25:25:889:0:0:0,-7.52575,-10 0/0:82.348:23:23:868:0:0:0,-6.92369,-10 0/0:99:44:43:1563:0:0:0,-10,-10 0/0:99:34:34:1273:0:0:0,-10,-10 0/0:43.2142:10:10:334:0:0:0,-3.0103,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:46.2245:11:11:396:0:0:0,-3.31133,-10 0/0:99:43:43:1583:0:0:0,-10,-10 0/0:82.348:23:23:851:0:0:0,-6.92369,-10 0/0:49.2348:12:12:433:0:0:0,-3.61236,-10 0/0:99:47:47:1672:0:0:0,-10,-10 0/0:43.2142:10:10:380:0:0:0,-3.0103,-10 0/0:99:33:33:1177:0:0:0,-9.93399,-10 0/0:34.1833:7:7:246:0:0:0,-2.10721,-10 0/0:58.2657:15:15:541:0:0:0,-4.51545,-10 0/0:37.1936:8:8:300:0:0:0,-2.40824,-10 0/0:94.3888:27:27:1018:0:0:0,-8.12781,-10 0/0:76.3274:21:21:785:0:0:0,-6.32163,-10 0/0:99:36:36:1326:0:0:0,-10,-10 0/0:97.3987:28:28:992:0:0:0,-8.42884,-10 0/0:64.2863:17:17:637:0:0:0,-5.11751,-10 0/0:99:32:32:1212:0:0:0,-9.63296,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:55.2554:14:14:506:0:0:0,-4.21442,-10 0/0:94.3888:27:27:1001:0:0:0,-8.12781,-10 0/0:70.3068:19:19:692:0:0:0,-5.71957,-10 0/0:70.3068:19:19:694:0:0:0,-5.71957,-10 0/0:94.3888:27:27:1011:0:0:0,-8.12781,-10 0/0:85.358:24:24:877:0:0:0,-7.22472,-10 0/0:58.2657:15:15:535:0:0:0,-4.51545,-10 0/0:94.3888:27:27:975:0:0:0,-8.12781,-10 0/0:61.2759:16:16:580:0:0:0,-4.81648,-10 0/0:76.3274:21:21:771:0:0:0,-6.32163,-10 0/0:46.2245:11:11:405:0:0:0,-3.31133,-10 0/0:34.1833:7:7:254:0:0:0,-2.10721,-10 0/0:46.2245:11:11:376:0:0:0,-3.31133,-10 0/0:99:43:43:1590:0:0:0,-10,-10 0/0:99:31:31:1072:0:0:0,-9.33193,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:82.348:23:23:815:0:0:0,-6.92369,-10 0/0:73.3171:20:20:746:0:0:0,-6.0206,-10 0/0:25.1524:4:4:152:0:0:0,-1.20412,-10 0/0:73.3171:20:20:751:0:0:0,-6.0206,-10 0/0:64.2863:18:17:640:0:0:0,-5.11751,-10 0/0:28.1627:5:5:189:0:0:0,-1.50515,-10 0/0:64.2863:17:17:646:0:0:0,-5.11751,-10 0/0:85.358:24:24:907:0:0:0,-7.22472,-10 0/0:58.2657:15:15:548:0:0:0,-4.51545,-10 scaffold_6 927289 . G A 295.99 . AB=0.333333;ABP=13.1438;AC=2;AF=0.0108696;AN=184;AO=15;CIGAR=1X;DP=1495;DPB=1495;DPRA=1.52297;EPP=6.62942;EPPR=4.08207;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9851;NS=92;NUMALT=1;ODDS=8.37499;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=518;QR=54186;RO=1477;RPP=35.5824;RPPR=3210.28;RUN=1;SAF=10;SAP=6.62942;SAR=5;SRF=752;SRP=4.08207;SRR=725;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.5197:16:15:550:0:0:0,-4.51545,-10 0/0:36.3755:1:1:38:0:0:0,-0.30103,-3.8 0/0:93.5713:20:20:757:0:0:0,-6.0206,-10 0/0:69.4888:12:12:445:0:0:0,-3.61236,-10 0/0:51.427:6:6:214:0:0:0,-1.80618,-10 0/0:63.4682:10:10:375:0:0:0,-3.0103,-10 0/0:99:34:34:1283:0:0:0,-10,-10 0/0:99:29:29:1067:0:0:0,-8.72987,-10 0/0:51.427:6:6:225:0:0:0,-1.80618,-10 0/0:48.4167:5:5:190:0:0:0,-1.50515,-10 0/0:42.3961:3:3:113:0:0:0,-0.90309,-10 0/0:42.3961:3:3:114:0:0:0,-0.90309,-10 0/0:93.5713:20:20:756:0:0:0,-6.0206,-10 0/0:99:37:37:1374:0:0:0,-10,-10 0/0:93.5713:20:20:716:0:0:0,-6.0206,-10 0/0:93.5713:21:20:739:0:0:0,-6.0206,-10 0/0:99:25:25:906:0:0:0,-7.52575,-10 0/0:63.4682:10:10:377:0:0:0,-3.0103,-10 0/0:87.5501:18:18:642:0:0:0,-5.41854,-10 0/0:99:32:32:1142:0:0:0,-9.63296,-10 0/0:60.4579:9:9:328:0:0:0,-2.70927,-10 0/0:96.5772:21:21:759:0:0:0,-6.32163,-10 0/0:54.4373:7:7:266:0:0:0,-2.10721,-10 0/0:60.4579:9:9:341:0:0:0,-2.70927,-10 0/0:78.5197:15:15:547:0:0:0,-4.51545,-10 0/0:90.5598:19:19:690:0:0:0,-5.71957,-10 0/0:84.5403:17:17:630:0:0:0,-5.11751,-10 0/0:57.4476:8:8:298:0:0:0,-2.40824,-10 0/0:90.5598:19:19:694:0:0:0,-5.71957,-10 0/0:99:31:30:1119:1:14:0,-6.44057,-10 0/0:39.3858:2:2:76:0:0:0,-0.60206,-7.22 0/0:63.4682:10:10:380:0:0:0,-3.0103,-10 0/0:96.5772:21:21:759:0:0:0,-6.32163,-10 0/0:66.4785:11:11:408:0:0:0,-3.31133,-10 0/0:75.5094:14:14:518:0:0:0,-4.21442,-10 0/0:54.4373:7:7:234:0:0:0,-2.10721,-10 0/0:75.5094:14:14:523:0:0:0,-4.21442,-10 0/0:90.5598:19:19:718:0:0:0,-5.71957,-10 0/0:96.5772:21:21:755:0:0:0,-6.32163,-10 0/0:63.4682:10:10:335:0:0:0,-3.0103,-10 0/0:96.5772:21:21:788:0:0:0,-6.32163,-10 0/0:84.5403:17:17:634:0:0:0,-5.11751,-10 0/0:93.5713:20:20:723:0:0:0,-6.0206,-10 0/0:99:27:27:939:0:0:0,-8.12781,-10 0/0:99:26:26:976:0:0:0,-7.82678,-10 0/0:60.4579:9:9:331:0:0:0,-2.70927,-10 0/0:99:36:36:1287:0:0:0,-10,-10 0/0:90.5598:19:19:681:0:0:0,-5.71957,-10 0/0:60.4579:9:9:308:0:0:0,-2.70927,-10 0/0:99:38:38:1407:0:0:0,-10,-10 0/0:42.3961:3:3:114:0:0:0,-0.90309,-10 0/0:99:38:38:1429:0:0:0,-10,-10 0/0:75.5094:14:14:529:0:0:0,-4.21442,-10 0/0:60.4579:9:9:336:0:0:0,-2.70927,-10 0/0:99:28:28:985:0:0:0,-8.42884,-10 0/0:69.4888:12:12:448:0:0:0,-3.61236,-10 0/0:75.5094:14:14:531:0:0:0,-4.21442,-10 0/0:51.427:6:6:216:0:0:0,-1.80618,-10 0/0:93.5713:20:20:721:0:0:0,-6.0206,-10 0/0:57.4476:8:8:304:0:0:0,-2.40824,-10 0/1:99:24:15:569:8:298:-10,0,-10 0/0:69.4888:12:12:447:0:0:0,-3.61236,-10 0/0:99:25:25:886:0:0:0,-7.52575,-10 0/1:99:18:12:438:6:206:-10,0,-10 0/0:60.4579:9:9:308:0:0:0,-2.70927,-10 0/0:96.5772:21:21:762:0:0:0,-6.32163,-10 0/0:84.5403:17:17:636:0:0:0,-5.11751,-10 0/0:60.4579:9:9:314:0:0:0,-2.70927,-10 0/0:99:40:40:1438:0:0:0,-10,-10 0/0:57.4476:8:8:274:0:0:0,-2.40824,-10 0/0:69.4888:12:12:418:0:0:0,-3.61236,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/0:78.5197:15:15:555:0:0:0,-4.51545,-10 0/0:96.5772:21:21:768:0:0:0,-6.32163,-10 0/0:81.5299:16:16:602:0:0:0,-4.81648,-10 0/0:63.4682:10:10:372:0:0:0,-3.0103,-10 0/0:54.4373:7:7:266:0:0:0,-2.10721,-10 0/0:63.4682:10:10:372:0:0:0,-3.0103,-10 0/0:54.4373:7:7:263:0:0:0,-2.10721,-10 0/0:54.4373:7:7:253:0:0:0,-2.10721,-10 0/0:99:38:38:1410:0:0:0,-10,-10 0/0:99:26:26:952:0:0:0,-7.82678,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:81.5299:16:16:570:0:0:0,-4.81648,-10 0/0:99:22:22:819:0:0:0,-6.62266,-10 0/0:39.3858:2:2:76:0:0:0,-0.60206,-7.22 0/0:63.4682:10:10:378:0:0:0,-3.0103,-10 0/0:66.4785:11:11:417:0:0:0,-3.31133,-10 0/0:42.3961:3:3:114:0:0:0,-0.90309,-10 0/0:69.4888:12:12:456:0:0:0,-3.61236,-10 0/0:72.4991:13:13:494:0:0:0,-3.91339,-10 0/0:48.4167:5:5:150:0:0:0,-1.50515,-10 scaffold_6 932268 . A C 975.668 . AB=0.909091;ABP=66.97;AC=4;AF=0.0217391;AN=184;AO=41;CIGAR=1X;DP=1707;DPB=1707;DPRA=0.699817;EPP=3.06326;EPPR=4.79788;GTI=2;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9525;NS=92;NUMALT=1;ODDS=5.91288;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1488;QR=60665;RO=1663;RPP=92.0407;RPPR=3527.83;RUN=1;SAF=21;SAP=3.06326;SAR=20;SRF=821;SRP=3.58614;SRR=842;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.3376:13:13:458:0:0:0,-3.91339,-10 0/0:48.2964:9:9:316:0:0:0,-2.70927,-10 0/0:99:27:27:1010:0:0:0,-8.12781,-10 0/0:57.3273:12:12:450:0:0:0,-3.61236,-10 0/0:72.3788:17:17:638:0:0:0,-5.11751,-10 0/0:54.317:11:11:408:0:0:0,-3.31133,-10 0/0:99:33:33:1231:0:0:0,-9.93399,-10 0/0:72.3788:17:17:618:0:0:0,-5.11751,-10 0/0:72.3788:17:17:610:0:0:0,-5.11751,-10 0/0:36.2552:5:5:187:0:0:0,-1.50515,-10 0/0:33.2449:4:4:148:0:0:0,-1.20412,-10 0/1:0.000365494:7:0:0:7:266:-10,-2.10721,0 0/0:99:29:29:1096:0:0:0,-8.72987,-10 0/0:99:42:42:1479:0:0:0,-10,-10 0/0:99:26:26:945:0:0:0,-7.82678,-10 0/0:99:37:37:1297:0:0:0,-10,-10 0/0:93.45:24:24:891:0:0:0,-7.22472,-10 0/0:45.2861:8:8:288:0:0:0,-2.40824,-10 0/0:78.3993:19:19:700:0:0:0,-5.71957,-10 0/0:96.4593:25:25:942:0:0:0,-7.52575,-10 0/0:78.3993:19:19:718:0:0:0,-5.71957,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:42.2758:7:7:222:0:0:0,-2.10721,-10 0/0:72.3788:17:17:642:0:0:0,-5.11751,-10 0/0:81.4096:20:20:719:0:0:0,-6.0206,-10 0/0:75.3891:18:18:654:0:0:0,-5.41854,-10 0/0:60.3376:13:13:490:0:0:0,-3.91339,-10 0/0:51.3067:10:10:377:0:0:0,-3.0103,-10 0/0:78.3993:19:19:696:0:0:0,-5.71957,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:51.3067:10:10:380:0:0:0,-3.0103,-10 0/0:39.2655:6:6:224:0:0:0,-1.80618,-10 0/0:69.3685:16:16:592:0:0:0,-4.81648,-10 0/0:42.2758:7:7:237:0:0:0,-2.10721,-10 0/0:99:32:32:1182:0:0:0,-9.63296,-10 0/0:45.2861:8:8:301:0:0:0,-2.40824,-10 0/0:57.3273:12:12:422:0:0:0,-3.61236,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:66.3582:15:15:559:0:0:0,-4.51545,-10 0/0:51.3067:10:10:357:0:0:0,-3.0103,-10 0/0:99:35:35:1285:0:0:0,-10,-10 0/0:63.3479:14:14:491:0:0:0,-4.21442,-10 0/0:63.3479:14:14:524:0:0:0,-4.21442,-10 0/0:99:34:33:1208:0:0:0,-9.93399,-10 0/0:66.3582:15:15:560:0:0:0,-4.51545,-10 0/0:66.3582:15:15:539:0:0:0,-4.51545,-10 0/0:99:38:38:1329:0:0:0,-10,-10 0/0:81.4096:20:20:755:0:0:0,-6.0206,-10 0/0:48.2964:9:9:339:0:0:0,-2.70927,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:54.317:11:11:415:0:0:0,-3.31133,-10 0/0:99:35:35:1279:0:0:0,-10,-10 0/0:66.3582:15:15:546:0:0:0,-4.51545,-10 0/0:48.2964:9:9:340:0:0:0,-2.70927,-10 0/0:99:35:35:1266:0:0:0,-10,-10 0/0:63.3479:14:14:516:0:0:0,-4.21442,-10 0/0:66.3582:15:15:567:0:0:0,-4.51545,-10 0/1:60.8501:16:1:38:15:538:-10,0,-0.18764 0/0:72.3788:17:17:606:0:0:0,-5.11751,-10 0/0:48.2964:9:9:320:0:0:0,-2.70927,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:69.3685:16:16:547:0:0:0,-4.81648,-10 0/0:99:35:34:1194:0:0:0,-10,-10 0/0:99:27:27:962:0:0:0,-8.12781,-10 0/0:54.317:11:11:396:0:0:0,-3.31133,-10 0/0:84.4196:21:21:773:0:0:0,-6.32163,-10 0/0:93.45:24:24:878:0:0:0,-7.22472,-10 0/0:57.3273:12:12:451:0:0:0,-3.61236,-10 0/0:99:42:42:1560:0:0:0,-10,-10 0/0:48.2964:9:9:340:0:0:0,-2.70927,-10 0/0:78.3993:19:19:650:0:0:0,-5.71957,-10 0/0:75.3891:18:18:636:0:0:0,-5.41854,-10 0/0:84.4196:21:21:771:0:0:0,-6.32163,-10 0/0:84.4196:21:21:780:0:0:0,-6.32163,-10 0/0:59.489:22:20:705:1:16:0,-3.55941,-10 0/0:66.3582:15:15:565:0:0:0,-4.51545,-10 0/0:51.3067:10:10:373:0:0:0,-3.0103,-10 0/1:0.0117111:12:0:0:12:442:-10,-3.61236,0 0/0:36.2552:5:5:179:0:0:0,-1.50515,-10 0/0:54.317:11:11:391:0:0:0,-3.31133,-10 0/0:99:43:43:1554:0:0:0,-10,-10 0/0:90.4401:23:23:854:0:0:0,-6.92369,-10 0/0:66.3582:15:15:556:0:0:0,-4.51545,-10 0/0:66.3582:15:15:526:0:0:0,-4.51545,-10 0/0:60.3376:13:13:479:0:0:0,-3.91339,-10 0/0:42.2758:7:7:261:0:0:0,-2.10721,-10 0/0:66.3582:15:15:536:0:0:0,-4.51545,-10 0/0:75.3891:18:18:640:0:0:0,-5.41854,-10 0/1:99:9:3:111:6:226:-10,0,-9.57501 0/0:69.3685:16:16:587:0:0:0,-4.81648,-10 0/0:81.4096:20:20:739:0:0:0,-6.0206,-10 0/0:48.2964:9:9:317:0:0:0,-2.70927,-10 scaffold_6 1115881 . G A 7203.81 . AB=0.522388;ABP=4.17706;AC=32;AF=0.173913;AN=184;AO=267;CIGAR=1X;DP=1556;DPB=1556;DPRA=1.10649;EPP=3.0835;EPPR=3.29544;GTI=1;LEN=1;MEANALT=1.04167;MQM=59.8801;MQMR=60;NS=92;NUMALT=1;ODDS=1.27518;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9702;QR=46704;RO=1287;RPP=582.793;RPPR=2797.7;RUN=1;SAF=135;SAP=3.0835;SAR=132;SRF=650;SRP=3.29544;SRR=637;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:28.1953:7:7:245:0:0:0,-2.10721,-10 1/1:14.5354:12:0:0:12:447:-10,-3.61236,0 0/1:99:20:10:365:10:370:-10,0,-10 0/0:64.3189:19:19:715:0:0:0,-5.71957,-10 0/1:99:9:5:188:4:151:-10,0,-10 0/0:40.2365:11:11:417:0:0:0,-3.31133,-10 0/0:94.4224:29:29:1040:0:0:0,-8.72987,-10 0/1:99:23:8:275:15:526:-10,0,-10 0/0:46.2571:13:13:483:0:0:0,-3.91339,-10 0/0:19.1644:4:4:150:0:0:0,-1.20412,-10 0/0:37.2262:10:10:343:0:0:0,-3.0103,-10 0/0:19.1644:4:4:148:0:0:0,-1.20412,-10 0/0:97.4278:30:30:1099:0:0:0,-9.0309,-10 0/0:61.3086:18:18:644:0:0:0,-5.41854,-10 0/1:99:30:12:450:18:670:-10,0,-10 0/0:64.3189:19:19:656:0:0:0,-5.71957,-10 0/0:79.3703:24:24:867:0:0:0,-7.22472,-10 0/0:40.2365:11:11:384:0:0:0,-3.31133,-10 0/0:46.2571:13:13:462:0:0:0,-3.91339,-10 0/0:99:41:41:1442:0:0:0,-10,-10 0/0:49.2674:14:14:501:0:0:0,-4.21442,-10 0/1:99:24:11:406:13:465:-10,0,-10 0/0:28.1953:7:7:253:0:0:0,-2.10721,-10 0/0:85.3907:26:26:957:0:0:0,-7.82678,-10 0/0:55.288:16:16:586:0:0:0,-4.81648,-10 0/1:99:25:12:400:13:433:-10,0,-10 0/0:37.2262:10:10:353:0:0:0,-3.0103,-10 0/0:49.2674:14:14:511:0:0:0,-4.21442,-10 0/0:52.2777:15:15:552:0:0:0,-4.51545,-10 0/0:70.3395:21:21:712:0:0:0,-6.32163,-10 0/0:31.2056:8:8:303:0:0:0,-2.40824,-10 0/0:43.2468:12:12:427:0:0:0,-3.61236,-10 1/1:14.5354:12:0:0:12:454:-10,-3.61236,0 0/0:46.2571:13:13:467:0:0:0,-3.91339,-10 0/0:55.288:16:16:604:0:0:0,-4.81648,-10 0/0:37.2262:10:10:348:0:0:0,-3.0103,-10 0/0:61.3086:18:18:682:0:0:0,-5.41854,-10 0/0:91.4105:28:28:1011:0:0:0,-8.42884,-10 0/0:40.2365:11:11:414:0:0:0,-3.31133,-10 0/0:52.2777:15:15:554:0:0:0,-4.51545,-10 0/0:91.4105:28:28:1053:0:0:0,-8.42884,-10 1/1:20.556:14:0:0:14:507:-10,-4.21442,0 0/1:21.1085:7:6:225:1:38:-2.53789,0,-10 0/1:99:28:16:586:12:407:-10,0,-10 1/1:32.5972:18:0:0:18:650:-10,-5.41854,0 0/0:43.2468:12:12:456:0:0:0,-3.61236,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:49.2674:14:14:509:0:0:0,-4.21442,-10 0/0:46.2571:13:13:494:0:0:0,-3.91339,-10 0/0:99:33:33:1160:0:0:0,-9.93399,-10 0/0:40.2365:11:11:378:0:0:0,-3.31133,-10 0/0:85.1522:43:42:1512:1:38:0,-7.51082,-10 0/0:37.2262:10:10:362:0:0:0,-3.0103,-10 0/0:31.2056:8:8:281:0:0:0,-2.40824,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:46.2571:13:13:468:0:0:0,-3.91339,-10 0/0:61.3086:18:18:682:0:0:0,-5.41854,-10 0/1:0.835251:7:0:0:7:266:-10,-2.10721,0 0/0:40.2365:11:11:394:0:0:0,-3.31133,-10 0/0:28.1953:7:7:265:0:0:0,-2.10721,-10 0/0:73.3498:22:22:771:0:0:0,-6.62266,-10 0/0:34.2159:9:9:332:0:0:0,-2.70927,-10 0/0:76.3601:23:23:832:0:0:0,-6.92369,-10 0/0:43.2468:12:12:456:0:0:0,-3.61236,-10 0/0:55.288:16:16:588:0:0:0,-4.81648,-10 0/0:82.3807:25:25:873:0:0:0,-7.52575,-10 0/0:49.2674:14:14:507:0:0:0,-4.21442,-10 0/0:28.1953:7:7:233:0:0:0,-2.10721,-10 0/0:73.3498:22:22:813:0:0:0,-6.62266,-10 0/0:46.2571:13:13:460:0:0:0,-3.91339,-10 1/1:14.5354:12:0:0:12:434:-10,-3.61236,0 0/0:88.4008:27:27:1002:0:0:0,-8.12781,-10 0/1:99:18:9:326:9:305:-10,0,-10 1/1:20.556:14:0:0:14:528:-10,-4.21442,0 0/1:99:26:12:444:14:496:-10,0,-10 0/0:34.2159:9:9:340:0:0:0,-2.70927,-10 0/0:67.3292:20:20:743:0:0:0,-6.0206,-10 1/1:26.5766:16:0:0:16:591:-10,-4.81648,0 0/0:22.1747:5:5:190:0:0:0,-1.50515,-10 0/0:31.2056:8:8:270:0:0:0,-2.40824,-10 0/0:99:41:41:1513:0:0:0,-10,-10 0/1:99:30:16:597:13:494:-10,0,-10 0/0:58.2983:17:17:632:0:0:0,-5.11751,-10 0/0:58.2983:17:17:623:0:0:0,-5.11751,-10 0/0:73.3498:22:22:812:0:0:0,-6.62266,-10 0/0:22.1747:5:5:186:0:0:0,-1.50515,-10 0/0:52.2777:16:15:504:0:0:0,-4.51545,-10 0/0:37.2262:10:10:342:0:0:0,-3.0103,-10 0/1:35.482:4:1:16:3:112:-9.85127,0,-0.99794 1/1:20.556:14:0:0:14:489:-10,-4.21442,0 0/1:99:17:9:330:8:303:-10,0,-10 1/1:20.556:14:0:0:14:528:-10,-4.21442,0 scaffold_6 1115888 . G A 958.142 . AB=0.461538;ABP=3.34437;AC=3;AF=0.0163043;AN=184;AO=40;CIGAR=1X;DP=1563;DPB=1563;DPRA=1.37015;EPP=6.48466;EPPR=3.47256;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.979;NS=92;NUMALT=1;ODDS=3.40296;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1422;QR=54783;RO=1522;RPP=89.8692;RPPR=3299.31;RUN=1;SAF=16;SAP=6.48466;SAR=24;SRF=771;SRP=3.58099;SRR=751;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:24.4368:7:7:242:0:0:0,-2.10721,-10 0/0:39.4883:12:12:421:0:0:0,-3.61236,-10 0/0:63.5707:20:20:735:0:0:0,-6.0206,-10 0/0:60.5604:19:19:709:0:0:0,-5.71957,-10 0/0:30.4574:9:9:341:0:0:0,-2.70927,-10 0/0:36.478:11:11:418:0:0:0,-3.31133,-10 0/0:90.6619:29:29:1032:0:0:0,-8.72987,-10 0/0:72.6016:23:23:856:0:0:0,-6.92369,-10 0/0:42.4986:13:13:485:0:0:0,-3.91339,-10 0/0:18.4162:5:5:172:0:0:0,-1.50515,-10 0/0:33.4677:10:10:359:0:0:0,-3.0103,-10 0/0:15.4059:4:4:151:0:0:0,-1.20412,-10 0/0:93.673:30:30:1047:0:0:0,-9.0309,-10 0/0:57.5501:18:18:635:0:0:0,-5.41854,-10 0/0:93.673:30:30:1101:0:0:0,-9.0309,-10 0/0:60.5604:19:19:666:0:0:0,-5.71957,-10 0/0:75.6119:24:24:865:0:0:0,-7.22472,-10 0/0:36.478:11:11:408:0:0:0,-3.31133,-10 0/0:42.4986:13:13:448:0:0:0,-3.91339,-10 0/0:99:41:40:1389:0:0:0,-10,-10 0/0:45.5089:14:14:504:0:0:0,-4.21442,-10 0/0:75.6119:24:24:853:0:0:0,-7.22472,-10 0/0:24.4368:7:7:250:0:0:0,-2.10721,-10 0/0:81.6324:26:26:944:0:0:0,-7.82678,-10 0/0:51.5295:16:16:597:0:0:0,-4.81648,-10 0/0:78.6222:25:25:873:0:0:0,-7.52575,-10 0/0:33.4677:10:10:320:0:0:0,-3.0103,-10 0/0:45.5089:14:14:528:0:0:0,-4.21442,-10 0/0:48.5192:15:15:564:0:0:0,-4.51545,-10 0/0:66.581:21:21:675:0:0:0,-6.32163,-10 0/0:27.4471:8:8:286:0:0:0,-2.40824,-10 0/0:39.4883:12:12:432:0:0:0,-3.61236,-10 0/0:39.4883:12:12:431:0:0:0,-3.61236,-10 0/0:42.4986:13:13:494:0:0:0,-3.91339,-10 0/0:54.5398:17:17:610:0:0:0,-5.11751,-10 0/0:33.4677:10:10:356:0:0:0,-3.0103,-10 0/0:57.5501:18:18:642:0:0:0,-5.41854,-10 0/0:87.6523:28:28:1006:0:0:0,-8.42884,-10 0/0:36.478:11:11:392:0:0:0,-3.31133,-10 0/0:48.5192:15:15:551:0:0:0,-4.51545,-10 0/0:87.6523:28:28:1032:0:0:0,-8.42884,-10 0/0:45.5089:14:14:523:0:0:0,-4.21442,-10 0/0:24.4368:7:7:241:0:0:0,-2.10721,-10 0/0:87.6523:28:28:1006:0:0:0,-8.42884,-10 0/0:57.5501:18:18:658:0:0:0,-5.41854,-10 0/0:39.4883:12:12:447:0:0:0,-3.61236,-10 0/0:99:37:37:1366:0:0:0,-10,-10 0/0:45.5089:14:14:494:0:0:0,-4.21442,-10 0/0:42.4986:13:13:484:0:0:0,-3.91339,-10 0/0:99:33:33:1146:0:0:0,-9.93399,-10 0/0:36.478:11:11:403:0:0:0,-3.31133,-10 0/0:99:43:43:1560:0:0:0,-10,-10 0/0:33.4677:10:10:354:0:0:0,-3.0103,-10 0/0:27.4471:8:8:290:0:0:0,-2.40824,-10 0/0:99:39:39:1371:0:0:0,-10,-10 0/0:42.4986:13:13:486:0:0:0,-3.91339,-10 0/0:57.5501:18:18:602:0:0:0,-5.41854,-10 0/0:24.4368:7:7:239:0:0:0,-2.10721,-10 0/0:36.478:11:11:394:0:0:0,-3.31133,-10 0/0:27.4471:8:8:301:0:0:0,-2.40824,-10 0/0:69.5913:22:22:814:0:0:0,-6.62266,-10 0/0:30.4574:9:9:341:0:0:0,-2.70927,-10 0/0:72.6016:23:23:832:0:0:0,-6.92369,-10 0/0:45.5089:14:14:521:0:0:0,-4.21442,-10 0/0:29.7936:16:15:551:1:15:0,-2.11236,-10 0/0:78.6222:25:25:880:0:0:0,-7.52575,-10 0/0:45.5089:14:14:526:0:0:0,-4.21442,-10 0/0:24.4368:7:7:257:0:0:0,-2.10721,-10 0/0:69.5913:22:22:796:0:0:0,-6.62266,-10 0/0:42.4986:13:13:479:0:0:0,-3.91339,-10 0/0:39.4883:12:12:420:0:0:0,-3.61236,-10 1/1:41.0833:27:0:0:27:960:-10,-8.12781,0 0/0:57.5501:18:18:639:0:0:0,-5.41854,-10 0/0:45.5089:14:14:526:0:0:0,-4.21442,-10 0/1:99:26:14:481:12:447:-10,0,-10 0/0:30.4574:9:9:339:0:0:0,-2.70927,-10 0/0:63.5707:20:20:732:0:0:0,-6.0206,-10 0/0:51.5295:16:16:577:0:0:0,-4.81648,-10 0/0:18.4162:5:5:190:0:0:0,-1.50515,-10 0/0:27.4471:8:8:257:0:0:0,-2.40824,-10 0/0:99:41:41:1476:0:0:0,-10,-10 0/0:93.673:30:30:1054:0:0:0,-9.0309,-10 0/0:54.5398:17:17:632:0:0:0,-5.11751,-10 0/0:54.5398:17:17:642:0:0:0,-5.11751,-10 0/0:69.5913:22:22:830:0:0:0,-6.62266,-10 0/0:18.4162:5:5:179:0:0:0,-1.50515,-10 0/0:51.5295:16:16:568:0:0:0,-4.81648,-10 0/0:33.4677:10:10:349:0:0:0,-3.0103,-10 0/0:15.4059:4:4:127:0:0:0,-1.20412,-10 0/0:45.5089:14:14:488:0:0:0,-4.21442,-10 0/0:54.5398:17:17:563:0:0:0,-5.11751,-10 0/0:45.5089:14:14:532:0:0:0,-4.21442,-10 scaffold_6 1245197 . C T 70.8378 . AB=0.454545;ABP=3.20771;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1X;DP=1521;DPB=1521;DPRA=1.40339;EPP=4.45795;EPPR=4.30114;GTI=0;LEN=1;MEANALT=1;MQM=54.6667;MQMR=59.9128;NS=92;NUMALT=1;ODDS=11.4314;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=192;QR=54970;RO=1514;RPP=16.0391;RPPR=3290.62;RUN=1;SAF=2;SAP=4.45795;SAR=4;SRF=742;SRP=4.30114;SRR=772;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.7183:8:8:282:0:0:0,-2.40824,-10 0/0:61.6874:5:5:189:0:0:0,-1.50515,-10 0/0:82.7595:12:12:437:0:0:0,-3.61236,-10 0/0:61.6874:5:5:157:0:0:0,-1.50515,-10 0/0:79.7491:11:11:411:0:0:0,-3.31133,-10 0/0:58.6771:4:4:152:0:0:0,-1.20412,-10 0/0:99:27:27:971:0:0:0,-8.12781,-10 0/0:99:18:18:672:0:0:0,-5.41854,-10 0/0:94.7972:16:16:593:0:0:0,-4.81648,-10 0/0:61.6874:5:5:189:0:0:0,-1.50515,-10 0/0:67.708:7:7:265:0:0:0,-2.10721,-10 0/0:67.708:7:7:259:0:0:0,-2.10721,-10 0/0:99:35:34:1244:1:16:0,-7.39198,-10 0/0:99:34:34:1282:0:0:0,-10,-10 0/0:99:27:26:949:0:0:0,-7.82678,-10 0/0:94.7972:16:16:597:0:0:0,-4.81648,-10 0/1:70.8378:11:6:211:5:176:-10,0,-10 0/0:79.7491:11:11:417:0:0:0,-3.31133,-10 0/0:99:20:20:717:0:0:0,-6.0206,-10 0/0:99:40:40:1443:0:0:0,-10,-10 0/0:99:20:20:748:0:0:0,-6.0206,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/0:85.7697:13:13:468:0:0:0,-3.91339,-10 0/0:99:19:19:702:0:0:0,-5.71957,-10 0/0:99:18:18:665:0:0:0,-5.41854,-10 0/0:99:25:25:902:0:0:0,-7.52575,-10 0/0:82.7595:12:12:444:0:0:0,-3.61236,-10 0/0:82.7595:12:12:454:0:0:0,-3.61236,-10 0/0:85.7697:13:13:438:0:0:0,-3.91339,-10 0/0:99:33:33:1188:0:0:0,-9.93399,-10 0/0:70.7183:8:8:302:0:0:0,-2.40824,-10 0/0:64.6977:6:6:221:0:0:0,-1.80618,-10 0/0:99:23:23:854:0:0:0,-6.92369,-10 0/0:82.7595:12:12:432:0:0:0,-3.61236,-10 0/0:85.7697:13:13:430:0:0:0,-3.91339,-10 0/0:61.6874:5:5:190:0:0:0,-1.50515,-10 0/0:70.7183:8:8:304:0:0:0,-2.40824,-10 0/0:99:18:18:671:0:0:0,-5.41854,-10 0/0:88.78:14:14:507:0:0:0,-4.21442,-10 0/0:97.8039:17:17:603:0:0:0,-5.11751,-10 0/0:99:18:18:638:0:0:0,-5.41854,-10 0/0:85.7697:13:13:487:0:0:0,-3.91339,-10 0/0:82.7595:12:12:434:0:0:0,-3.61236,-10 0/0:99:23:23:850:0:0:0,-6.92369,-10 0/0:99:22:22:788:0:0:0,-6.62266,-10 0/0:73.7286:9:9:339:0:0:0,-2.70927,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:99:24:24:880:0:0:0,-7.22472,-10 0/0:91.7886:15:15:531:0:0:0,-4.51545,-10 0/0:99:29:29:1031:0:0:0,-8.72987,-10 0/0:82.7595:12:12:441:0:0:0,-3.61236,-10 0/0:99:36:36:1290:0:0:0,-10,-10 0/0:88.78:14:14:519:0:0:0,-4.21442,-10 0/0:61.6874:5:5:182:0:0:0,-1.50515,-10 0/0:99:36:36:1296:0:0:0,-10,-10 0/0:67.708:7:7:249:0:0:0,-2.10721,-10 0/0:99:31:31:1073:0:0:0,-9.33193,-10 0/0:64.6977:6:6:218:0:0:0,-1.80618,-10 0/0:94.7972:16:16:585:0:0:0,-4.81648,-10 0/0:99:20:20:742:0:0:0,-6.0206,-10 0/0:99:23:23:867:0:0:0,-6.92369,-10 0/0:97.8039:17:17:598:0:0:0,-5.11751,-10 0/0:99:29:29:1068:0:0:0,-8.72987,-10 0/0:76.7388:10:10:357:0:0:0,-3.0103,-10 0/0:70.7183:8:8:299:0:0:0,-2.40824,-10 0/0:99:20:20:684:0:0:0,-6.0206,-10 0/0:91.7886:15:15:548:0:0:0,-4.51545,-10 0/0:88.78:14:14:521:0:0:0,-4.21442,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:67.708:7:7:261:0:0:0,-2.10721,-10 0/0:99:21:21:754:0:0:0,-6.32163,-10 0/0:99:20:20:698:0:0:0,-6.0206,-10 0/0:99:25:25:910:0:0:0,-7.52575,-10 0/0:85.7697:13:13:474:0:0:0,-3.91339,-10 0/0:99:24:24:900:0:0:0,-7.22472,-10 0/0:82.7595:12:12:391:0:0:0,-3.61236,-10 0/0:70.7183:8:8:281:0:0:0,-2.40824,-10 0/0:67.708:7:7:260:0:0:0,-2.10721,-10 0/0:70.7183:8:8:282:0:0:0,-2.40824,-10 0/0:55.6668:3:3:114:0:0:0,-0.90309,-10 0/0:99:35:35:1241:0:0:0,-10,-10 0/0:99:24:24:862:0:0:0,-7.22472,-10 0/0:99:18:18:650:0:0:0,-5.41854,-10 0/0:99:20:20:710:0:0:0,-6.0206,-10 0/0:94.7972:16:16:590:0:0:0,-4.81648,-10 0/0:55.6668:3:3:114:0:0:0,-0.90309,-10 0/0:82.7595:12:12:423:0:0:0,-3.61236,-10 0/0:82.7595:12:12:446:0:0:0,-3.61236,-10 0/0:49.6462:1:1:31:0:0:0,-0.30103,-3.1 0/0:88.78:14:14:491:0:0:0,-4.21442,-10 0/0:88.78:14:14:525:0:0:0,-4.21442,-10 0/0:97.8039:17:17:638:0:0:0,-5.11751,-10 scaffold_6 1326747 . C T 721.226 . AB=0.454545;ABP=4.19474;AC=4;AF=0.0217391;AN=184;AO=30;CIGAR=1X;DP=1239;DPB=1239;DPRA=1.23785;EPP=3.29983;EPPR=13.13;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9793;NS=92;NUMALT=1;ODDS=5.95542;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1105;QR=44105;RO=1207;RPP=68.1545;RPPR=2615.3;RUN=1;SAF=14;SAP=3.29983;SAR=16;SRF=565;SRP=13.677;SRR=642;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:43.9612:8:8:258:0:0:0,-2.40824,-10 0/0:49.9818:10:10:379:0:0:0,-3.0103,-10 0/0:71.0539:17:17:573:0:0:0,-5.11751,-10 0/0:40.9509:7:7:266:0:0:0,-2.10721,-10 0/1:37.6774:9:7:266:2:75:-5.97203,0,-10 0/0:34.9303:5:5:190:0:0:0,-1.50515,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:56.0024:12:12:449:0:0:0,-3.61236,-10 0/0:59.0127:13:13:462:0:0:0,-3.91339,-10 0/0:34.9303:5:5:190:0:0:0,-1.50515,-10 0/1:0.000991817:8:0:0:8:303:-10,-2.40824,0 0/0:34.9303:5:5:177:0:0:0,-1.50515,-10 0/1:99:33:18:657:15:537:-10,0,-10 0/1:99:16:11:409:5:190:-10,0,-10 0/0:59.0127:13:13:480:0:0:0,-3.91339,-10 0/0:74.0642:18:18:658:0:0:0,-5.41854,-10 0/0:74.0642:18:18:588:0:0:0,-5.41854,-10 0/0:43.9612:8:8:295:0:0:0,-2.40824,-10 0/0:46.9715:9:9:342:0:0:0,-2.70927,-10 0/0:89.1155:23:23:866:0:0:0,-6.92369,-10 0/0:68.0436:16:16:595:0:0:0,-4.81648,-10 0/0:89.1155:23:23:846:0:0:0,-6.92369,-10 0/0:34.9303:5:5:190:0:0:0,-1.50515,-10 0/0:68.0436:16:16:578:0:0:0,-4.81648,-10 0/0:71.0539:17:17:621:0:0:0,-5.11751,-10 0/0:77.0745:19:19:703:0:0:0,-5.71957,-10 0/0:68.0436:16:16:561:0:0:0,-4.81648,-10 0/0:46.9715:9:9:342:0:0:0,-2.70927,-10 0/0:68.0436:16:16:607:0:0:0,-4.81648,-10 0/0:92.1256:24:24:886:0:0:0,-7.22472,-10 0/0:40.9509:7:7:259:0:0:0,-2.10721,-10 0/0:52.9921:11:11:417:0:0:0,-3.31133,-10 0/0:52.9921:11:11:417:0:0:0,-3.31133,-10 0/0:49.9818:10:10:380:0:0:0,-3.0103,-10 0/0:74.0642:18:18:684:0:0:0,-5.41854,-10 0/0:40.9509:7:7:263:0:0:0,-2.10721,-10 0/0:43.9612:8:8:300:0:0:0,-2.40824,-10 0/0:62.023:14:14:508:0:0:0,-4.21442,-10 0/0:40.9509:7:7:244:0:0:0,-2.10721,-10 0/0:56.0024:12:12:452:0:0:0,-3.61236,-10 0/0:99:28:28:1040:0:0:0,-8.42884,-10 0/0:65.0333:15:15:543:0:0:0,-4.51545,-10 0/0:43.9612:8:8:301:0:0:0,-2.40824,-10 0/0:89.1155:23:23:836:0:0:0,-6.92369,-10 0/0:59.0127:13:13:490:0:0:0,-3.91339,-10 0/0:46.9715:9:9:335:0:0:0,-2.70927,-10 0/0:99:39:39:1452:0:0:0,-10,-10 0/0:74.0642:18:18:661:0:0:0,-5.41854,-10 0/0:34.9303:5:5:181:0:0:0,-1.50515,-10 0/0:99:34:34:1204:0:0:0,-10,-10 0/0:40.9509:7:7:249:0:0:0,-2.10721,-10 0/0:99:30:30:1047:0:0:0,-9.0309,-10 0/0:40.9509:7:7:266:0:0:0,-2.10721,-10 0/0:40.9509:7:7:258:0:0:0,-2.10721,-10 0/0:99:31:31:1083:0:0:0,-9.33193,-10 0/0:46.9715:9:9:334:0:0:0,-2.70927,-10 0/0:68.0436:16:16:528:0:0:0,-4.81648,-10 0/0:40.9509:7:7:264:0:0:0,-2.10721,-10 0/0:37.9406:7:6:225:0:0:0,-1.80618,-10 0/0:37.9406:6:6:221:0:0:0,-1.80618,-10 0/0:68.0436:16:16:601:0:0:0,-4.81648,-10 0/0:46.9715:10:9:329:0:0:0,-2.70927,-10 0/0:77.0745:19:19:700:0:0:0,-5.71957,-10 0/0:49.9818:10:10:367:0:0:0,-3.0103,-10 0/0:49.9818:10:10:368:0:0:0,-3.0103,-10 0/0:86.1053:22:22:809:0:0:0,-6.62266,-10 0/0:52.9921:11:11:399:0:0:0,-3.31133,-10 0/0:31.92:4:4:152:0:0:0,-1.20412,-10 0/0:99:27:27:975:0:0:0,-8.12781,-10 0/0:37.9406:6:6:203:0:0:0,-1.80618,-10 0/0:49.9818:10:10:379:0:0:0,-3.0103,-10 0/0:86.1053:22:22:780:0:0:0,-6.62266,-10 0/0:46.9715:9:9:337:0:0:0,-2.70927,-10 0/0:49.9818:10:10:377:0:0:0,-3.0103,-10 0/0:62.023:14:14:509:0:0:0,-4.21442,-10 0/0:46.9715:9:9:341:0:0:0,-2.70927,-10 0/0:59.0127:13:13:487:0:0:0,-3.91339,-10 0/0:34.9303:5:5:190:0:0:0,-1.50515,-10 0/0:37.9406:6:6:223:0:0:0,-1.80618,-10 0/0:37.9406:6:6:205:0:0:0,-1.80618,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:65.0333:15:15:538:0:0:0,-4.51545,-10 0/0:59.0127:13:13:487:0:0:0,-3.91339,-10 0/0:80.0848:20:20:737:0:0:0,-6.0206,-10 0/0:56.0024:12:12:401:0:0:0,-3.61236,-10 0/0:31.92:4:4:146:0:0:0,-1.20412,-10 0/0:65.0333:15:15:544:0:0:0,-4.51545,-10 0/0:46.9715:9:9:342:0:0:0,-2.70927,-10 0/0:25.8994:2:2:76:0:0:0,-0.60206,-7.22 0/0:43.9612:8:8:303:0:0:0,-2.40824,-10 0/0:59.0127:13:13:490:0:0:0,-3.91339,-10 0/0:49.9818:10:10:357:0:0:0,-3.0103,-10 scaffold_6 1349888 . G A 118.4 . AB=0.304348;ABP=10.6577;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=2287;DPB=2287;DPRA=0.99543;EPP=3.87889;EPPR=4.17853;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9974;NS=92;NUMALT=1;ODDS=16.9986;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=292;QR=83016;RO=2277;RPP=24.725;RPPR=4947.45;RUN=1;SAF=4;SAP=3.87889;SAR=6;SRF=1156;SRP=4.17853;SRR=1121;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:97.9033:13:13:451:0:0:0,-3.91339,-10 0/0:85.8648:9:9:274:0:0:0,-2.70927,-10 0/1:99:23:16:599:7:244:-10,0,-10 0/0:85.8648:9:9:331:0:0:0,-2.70927,-10 0/0:99:16:16:607:0:0:0,-4.81648,-10 0/0:79.8444:7:7:262:0:0:0,-2.10721,-10 0/0:99:61:61:2255:0:0:0,-10,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:99:20:20:724:0:0:0,-6.0206,-10 0/0:76.8341:6:6:220:0:0:0,-1.80618,-10 0/0:79.8444:7:7:264:0:0:0,-2.10721,-10 0/0:85.8648:9:9:319:0:0:0,-2.70927,-10 0/0:99:42:42:1576:0:0:0,-10,-10 0/0:99:63:63:2278:0:0:0,-10,-10 0/0:99:33:33:1229:0:0:0,-9.93399,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:99:21:21:765:0:0:0,-6.32163,-10 0/0:99:17:17:593:0:0:0,-5.11751,-10 0/0:99:26:26:947:0:0:0,-7.82678,-10 0/0:99:52:52:1866:0:0:0,-10,-10 0/0:99:21:21:763:0:0:0,-6.32163,-10 0/0:99:39:39:1392:0:0:0,-10,-10 0/0:85.8648:9:9:334:0:0:0,-2.70927,-10 0/0:99:19:19:701:0:0:0,-5.71957,-10 0/0:99:32:31:1151:1:16:0,-6.52781,-10 0/0:99:30:30:1089:0:0:0,-9.0309,-10 0/0:99:28:28:1004:0:0:0,-8.42884,-10 0/0:99:26:26:907:0:0:0,-7.82678,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:99:44:44:1632:0:0:0,-10,-10 0/0:76.8341:6:6:224:0:0:0,-1.80618,-10 0/0:73.8238:5:5:190:0:0:0,-1.50515,-10 0/0:99:31:31:1060:0:0:0,-9.33193,-10 0/0:97.9033:13:13:484:0:0:0,-3.91339,-10 0/0:99:19:19:701:0:0:0,-5.71957,-10 0/0:91.8849:11:11:416:0:0:0,-3.31133,-10 0/0:99:16:16:584:0:0:0,-4.81648,-10 0/0:99:38:38:1400:0:0:0,-10,-10 0/0:99:21:21:773:0:0:0,-6.32163,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:99:38:38:1386:0:0:0,-10,-10 0/0:99:22:22:791:0:0:0,-6.62266,-10 0/0:99:15:15:563:0:0:0,-4.51545,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:99:15:15:551:0:0:0,-4.51545,-10 0/0:99:64:64:2321:0:0:0,-10,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:97.9033:13:13:494:0:0:0,-3.91339,-10 0/0:99:53:53:1948:0:0:0,-10,-10 0/0:99:17:17:620:0:0:0,-5.11751,-10 0/0:99:42:42:1576:0:0:0,-10,-10 0/0:99:20:20:692:0:0:0,-6.0206,-10 0/0:99:17:17:601:0:0:0,-5.11751,-10 0/0:99:68:68:2462:0:0:0,-10,-10 0/0:99:18:18:659:0:0:0,-5.41854,-10 0/0:99:25:25:869:0:0:0,-7.52575,-10 0/0:73.8238:5:5:190:0:0:0,-1.50515,-10 0/0:99:25:25:884:0:0:0,-7.52575,-10 0/0:99:17:17:622:0:0:0,-5.11751,-10 0/0:99:40:40:1491:0:0:0,-10,-10 0/0:99:27:27:937:0:0:0,-8.12781,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:99:28:28:1050:0:0:0,-8.42884,-10 0/0:99:22:22:759:0:0:0,-6.62266,-10 0/0:99:41:41:1450:0:0:0,-10,-10 0/0:99:24:24:854:0:0:0,-7.22472,-10 0/0:99:24:24:874:0:0:0,-7.22472,-10 0/0:99:44:44:1540:0:0:0,-10,-10 0/0:88.0579:20:19:695:1:16:0,-3.11957,-10 0/0:99:31:31:1145:0:0:0,-9.33193,-10 0/0:99:32:32:1196:0:0:0,-9.63296,-10 0/0:99:44:44:1643:0:0:0,-10,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:97.9033:13:13:478:0:0:0,-3.91339,-10 0/0:99:17:17:593:0:0:0,-5.11751,-10 0/0:99:18:18:627:0:0:0,-5.41854,-10 0/0:76.8341:6:6:197:0:0:0,-1.80618,-10 0/0:91.8849:11:11:394:0:0:0,-3.31133,-10 0/0:99:40:40:1462:0:0:0,-10,-10 0/0:99:24:23:854:1:16:0,-4.24451,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:99:39:39:1409:0:0:0,-10,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:73.8238:5:5:166:0:0:0,-1.50515,-10 0/0:97.9033:13:13:478:0:0:0,-3.91339,-10 0/0:99:19:19:711:0:0:0,-5.71957,-10 0/0:79.8444:7:7:232:0:0:0,-2.10721,-10 0/0:88.875:10:10:349:0:0:0,-3.0103,-10 0/0:82.8546:8:8:303:0:0:0,-2.40824,-10 0/0:99:15:15:564:0:0:0,-4.51545,-10 scaffold_6 1464636 . C G 4066.56 . AB=0.423208;ABP=18.0179;AC=12;AF=0.0652174;AN=184;AO=150;CIGAR=1X;DP=2098;DPB=2098;DPRA=1.3204;EPP=4.45795;EPPR=7.3041;GTI=1;LEN=1;MEANALT=1.18182;MQM=60;MQMR=59.9995;NS=92;NUMALT=1;ODDS=2.42271;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5480;QR=70998;RO=1944;RPP=328.731;RPPR=4224.35;RUN=1;SAF=80;SAP=4.45795;SAR=70;SRF=1003;SRP=7.3041;SRR=941;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.0998:17:17:611:0:0:0,-5.11751,-10 0/0:42.0071:8:8:262:0:0:0,-2.40824,-10 0/0:90.1717:24:24:910:0:0:0,-7.22472,-10 0/0:66.0895:16:16:577:0:0:0,-4.81648,-10 0/0:78.1306:20:20:710:0:0:0,-6.0206,-10 0/0:57.0586:13:13:467:0:0:0,-3.91339,-10 0/0:99:64:64:2341:0:0:0,-10,-10 0/0:81.1408:21:21:768:0:0:0,-6.32163,-10 0/0:69.0998:17:17:630:0:0:0,-5.11751,-10 0/0:45.0174:9:9:340:0:0:0,-2.70927,-10 0/0:54.0483:12:12:443:0:0:0,-3.61236,-10 0/0:48.0277:10:10:371:0:0:0,-3.0103,-10 0/0:99:40:40:1494:0:0:0,-10,-10 0/0:99:41:41:1489:0:0:0,-10,-10 0/0:99:48:48:1785:0:0:0,-10,-10 0/0:96.1916:26:26:939:0:0:0,-7.82678,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:54.0483:12:12:433:0:0:0,-3.61236,-10 0/0:72.1101:18:18:678:0:0:0,-5.41854,-10 0/1:99:45:26:969:19:684:-10,0,-10 0/0:78.1306:20:20:727:0:0:0,-6.0206,-10 0/1:99:26:13:484:12:446:-10,0,-10 0/0:60.0689:14:14:505:0:0:0,-4.21442,-10 0/1:99:20:9:319:11:396:-10,0,-10 0/0:54.0483:12:12:431:0:0:0,-3.61236,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:84.1512:22:22:809:0:0:0,-6.62266,-10 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:99:28:28:987:0:0:0,-8.42884,-10 0/0:99:35:35:1300:0:0:0,-10,-10 0/0:26.9556:3:3:114:0:0:0,-0.90309,-10 0/0:54.0483:12:12:454:0:0:0,-3.61236,-10 0/0:99:27:27:991:0:0:0,-8.12781,-10 0/0:54.0483:12:12:448:0:0:0,-3.61236,-10 0/0:84.1512:22:22:822:0:0:0,-6.62266,-10 0/0:29.9659:4:4:151:0:0:0,-1.20412,-10 0/0:54.0483:12:12:443:0:0:0,-3.61236,-10 0/1:99:22:13:465:9:341:-10,0,-10 0/0:81.1408:21:21:785:0:0:0,-6.32163,-10 0/0:84.1512:22:22:831:0:0:0,-6.62266,-10 0/1:99:30:20:699:10:360:-10,0,-10 0/0:81.1408:21:21:778:0:0:0,-6.32163,-10 0/0:96.1916:26:26:969:0:0:0,-7.82678,-10 0/0:99:38:38:1379:0:0:0,-10,-10 0/0:96.1916:27:26:978:0:0:0,-7.82678,-10 0/1:99:12:7:244:5:180:-10,0,-10 0/1:99:45:23:816:22:804:-10,0,-10 0/1:99:30:19:707:11:388:-10,0,-10 0/1:0.365789:6:0:0:6:215:-10,-1.80618,0 0/0:99:41:41:1412:0:0:0,-10,-10 0/0:45.0174:9:9:337:0:0:0,-2.70927,-10 0/0:99:42:42:1514:0:0:0,-10,-10 0/0:51.038:11:11:405:0:0:0,-3.31133,-10 0/0:51.038:11:11:417:0:0:0,-3.31133,-10 0/1:99:57:36:1285:19:690:-10,0,-10 0/0:87.1615:23:23:812:0:0:0,-6.92369,-10 1/1:33.4462:26:0:0:26:976:-10,-7.82678,0 0/0:32.9762:5:5:189:0:0:0,-1.50515,-10 0/0:78.1306:20:20:730:0:0:0,-6.0206,-10 0/0:66.0895:16:16:561:0:0:0,-4.81648,-10 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:81.1408:21:21:737:0:0:0,-6.32163,-10 0/0:99:48:48:1767:0:0:0,-10,-10 0/0:78.1306:20:20:701:0:0:0,-6.0206,-10 0/0:72.1101:18:18:671:0:0:0,-5.41854,-10 0/0:90.1717:24:24:826:0:0:0,-7.22472,-10 0/0:90.1717:24:24:907:0:0:0,-7.22472,-10 0/0:66.0895:16:16:588:0:0:0,-4.81648,-10 0/0:99:46:46:1673:0:0:0,-10,-10 0/0:72.1101:18:18:681:0:0:0,-5.41854,-10 0/0:99:31:31:1126:0:0:0,-9.33193,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:66.0895:16:16:581:0:0:0,-4.81648,-10 0/0:99:38:38:1424:0:0:0,-10,-10 0/0:63.0792:15:15:564:0:0:0,-4.51545,-10 0/0:63.0792:15:15:568:0:0:0,-4.51545,-10 0/0:57.0586:13:13:446:0:0:0,-3.91339,-10 0/0:51.038:11:11:402:0:0:0,-3.31133,-10 0/0:69.0998:17:17:621:0:0:0,-5.11751,-10 0/0:99:44:44:1622:0:0:0,-10,-10 0/0:99:36:36:1293:0:0:0,-10,-10 0/0:66.0895:16:16:599:0:0:0,-4.81648,-10 0/0:69.0998:17:17:600:0:0:0,-5.11751,-10 0/0:99:28:28:1017:0:0:0,-8.42884,-10 0/0:23.9453:2:2:63:0:0:0,-0.60206,-5.985 0/0:81.1408:21:21:733:0:0:0,-6.32163,-10 0/0:48.0277:10:10:380:0:0:0,-3.0103,-10 0/0:38.9968:7:7:238:0:0:0,-2.10721,-10 0/0:69.0998:17:17:612:0:0:0,-5.11751,-10 0/0:84.1512:22:22:818:0:0:0,-6.62266,-10 0/0:57.0586:13:13:482:0:0:0,-3.91339,-10 scaffold_6 1687624 . C G 1805.91 . AB=0.641026;ABP=16.4846;AC=5;AF=0.0271739;AN=184;AO=70;CIGAR=1X;DP=2350;DPB=2350;DPRA=0.957371;EPP=3.13438;EPPR=5.39339;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9434;NS=92;NUMALT=1;ODDS=0.758756;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2533;QR=80848;RO=2278;RPP=155.013;RPPR=4940.94;RUN=1;SAF=36;SAP=3.13438;SAR=34;SRF=1115;SRP=5.20656;SRR=1163;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.494:18:18:618:0:0:0,-5.41854,-10 0/0:51.4219:11:11:396:0:0:0,-3.31133,-10 0/0:90.556:24:24:840:0:0:0,-7.22472,-10 0/0:69.4837:17:17:625:0:0:0,-5.11751,-10 0/0:63.4631:15:15:516:0:0:0,-4.51545,-10 0/0:69.4837:17:17:575:0:0:0,-5.11751,-10 0/0:99:61:61:2104:0:0:0,-10,-10 0/1:99:32:14:434:18:649:-10,0,-10 0/0:51.4219:11:11:361:0:0:0,-3.31133,-10 0/0:33.3601:5:5:173:0:0:0,-1.50515,-10 0/0:48.4116:10:10:339:0:0:0,-3.0103,-10 0/0:36.3704:6:6:210:0:0:0,-1.80618,-10 0/0:99:45:45:1577:0:0:0,-10,-10 0/0:99:47:47:1595:0:0:0,-10,-10 0/1:99:28:14:500:14:525:-10,0,-10 0/0:99:41:41:1483:0:0:0,-10,-10 0/0:99:31:31:1118:0:0:0,-9.33193,-10 0/0:45.4013:9:9:327:0:0:0,-2.70927,-10 0/0:84.5353:22:22:795:0:0:0,-6.62266,-10 0/0:99:50:50:1796:0:0:0,-10,-10 0/0:78.5146:20:20:693:0:0:0,-6.0206,-10 0/0:99:43:43:1593:0:0:0,-10,-10 0/0:51.4219:11:11:372:0:0:0,-3.31133,-10 0/0:99:36:36:1284:0:0:0,-10,-10 0/0:96.5724:26:26:910:0:0:0,-7.82678,-10 0/0:99:36:36:1241:0:0:0,-10,-10 0/0:75.5043:19:19:638:0:0:0,-5.71957,-10 0/0:78.5146:20:20:739:0:0:0,-6.0206,-10 0/1:1.59038:18:0:0:18:631:-10,-5.41854,0 0/0:99:54:54:1999:0:0:0,-10,-10 0/0:39.3807:7:7:239:0:0:0,-2.10721,-10 0/0:45.4013:9:9:321:0:0:0,-2.70927,-10 0/0:75.5043:19:19:685:0:0:0,-5.71957,-10 0/0:87.545:23:23:843:0:0:0,-6.92369,-10 0/0:72.494:18:18:656:0:0:0,-5.41854,-10 0/0:54.4322:12:12:411:0:0:0,-3.61236,-10 0/0:54.4322:12:12:426:0:0:0,-3.61236,-10 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:78.5146:20:20:720:0:0:0,-6.0206,-10 0/0:93.5664:25:25:873:0:0:0,-7.52575,-10 0/0:99:32:32:1179:0:0:0,-9.63296,-10 0/0:87.545:23:23:818:0:0:0,-6.92369,-10 0/0:66.4734:16:16:571:0:0:0,-4.81648,-10 0/0:99:43:43:1515:0:0:0,-10,-10 0/0:93.5664:25:25:903:0:0:0,-7.52575,-10 0/0:87.545:23:23:780:0:0:0,-6.92369,-10 0/0:99:61:61:2150:0:0:0,-10,-10 0/0:99:36:36:1266:0:0:0,-10,-10 0/0:57.4425:13:13:493:0:0:0,-3.91339,-10 0/0:99:42:42:1427:0:0:0,-10,-10 0/0:78.5146:20:20:727:0:0:0,-6.0206,-10 0/0:99:50:50:1780:0:0:0,-10,-10 0/0:69.4837:17:17:609:0:0:0,-5.11751,-10 0/0:30.3498:4:4:149:0:0:0,-1.20412,-10 0/0:99:60:60:2112:0:0:0,-10,-10 0/0:75.5043:19:19:667:0:0:0,-5.71957,-10 0/0:99:28:28:992:0:0:0,-8.42884,-10 0/0:45.4013:9:9:285:0:0:0,-2.70927,-10 1/1:14.4349:20:0:0:20:728:-10,-6.0206,0 0/0:66.4734:16:16:561:0:0:0,-4.81648,-10 0/0:99:35:34:1230:0:0:0,-10,-10 0/0:84.5353:22:22:813:0:0:0,-6.62266,-10 0/0:99:46:46:1664:0:0:0,-10,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/0:72.494:18:18:590:0:0:0,-5.41854,-10 0/0:99:51:50:1758:0:0:0,-10,-10 0/0:93.5664:25:25:905:0:0:0,-7.52575,-10 0/0:45.4013:9:9:322:0:0:0,-2.70927,-10 0/0:99:45:45:1645:0:0:0,-10,-10 0/0:90.556:24:24:876:0:0:0,-7.22472,-10 0/0:87.545:23:23:824:0:0:0,-6.92369,-10 0/0:99:36:36:1249:0:0:0,-10,-10 0/0:99:30:30:1064:0:0:0,-9.0309,-10 0/0:60.4528:14:14:488:0:0:0,-4.21442,-10 0/0:99:37:37:1319:0:0:0,-10,-10 0/0:51.4219:11:11:392:0:0:0,-3.31133,-10 0/0:72.494:18:18:659:0:0:0,-5.41854,-10 0/0:81.5248:21:21:771:0:0:0,-6.32163,-10 0/0:39.3807:7:7:252:0:0:0,-2.10721,-10 0/0:69.4837:17:17:617:0:0:0,-5.11751,-10 0/0:99:44:44:1512:0:0:0,-10,-10 0/0:87.545:23:23:832:0:0:0,-6.92369,-10 0/0:99:33:33:1177:0:0:0,-9.93399,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/0:99:36:36:1285:0:0:0,-10,-10 0/0:48.4116:10:10:365:0:0:0,-3.0103,-10 0/0:99:27:27:932:0:0:0,-8.12781,-10 0/0:66.4734:16:16:547:0:0:0,-4.81648,-10 0/0:33.3601:5:5:178:0:0:0,-1.50515,-10 0/0:81.5248:21:21:747:0:0:0,-6.32163,-10 0/0:99:34:34:1225:0:0:0,-10,-10 0/0:93.5664:25:25:896:0:0:0,-7.52575,-10 scaffold_6 1722898 . G A 13238.3 . AB=0.530973;ABP=5.83514;AC=52;AF=0.282609;AN=184;AO=467;CIGAR=1X;DP=1475;DPB=1475;DPRA=1.33899;EPP=4.05651;EPPR=4.05502;GTI=0;LEN=1;MEANALT=1.02703;MQM=59.9272;MQMR=59.9911;NS=92;NUMALT=1;ODDS=0.177954;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17146;QR=36512;RO=1006;RPP=948.791;RPPR=2033.96;RUN=1;SAF=220;SAP=6.40003;SAR=247;SRF=498;SRP=3.22615;SRR=508;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:26.0487:9:9:339:0:0:0,-2.70927,-10 0/0:44.1105:15:15:553:0:0:0,-4.51545,-10 0/0:35.0796:12:12:408:0:0:0,-3.61236,-10 0/0:35.0796:12:12:448:0:0:0,-3.61236,-10 0/0:38.0899:13:13:468:0:0:0,-3.91339,-10 0/0:23.0384:8:8:304:0:0:0,-2.40824,-10 0/0:75.8514:35:34:1245:1:16:0,-7.39198,-10 0/0:71.2032:24:24:823:0:0:0,-7.22472,-10 0/0:17.0178:6:6:228:0:0:0,-1.80618,-10 0/0:17.0178:6:6:228:0:0:0,-1.80618,-10 0/0:17.0178:6:6:223:0:0:0,-1.80618,-10 0/0:7.9869:3:3:114:0:0:0,-0.90309,-10 0/0:89.2641:30:30:1097:0:0:0,-9.0309,-10 0/0:98.2891:33:33:1211:0:0:0,-9.93399,-10 0/0:59.162:20:20:731:0:0:0,-6.0206,-10 0/0:74.2135:25:25:898:0:0:0,-7.52575,-10 0/0:47.1208:16:16:601:0:0:0,-4.81648,-10 0/0:26.0487:9:9:337:0:0:0,-2.70927,-10 0/1:99:13:7:265:6:227:-10,0,-10 0/1:99:37:20:748:17:639:-10,0,-10 0/1:99:20:13:474:7:264:-10,0,-10 0/1:99:16:6:211:10:358:-10,0,-10 1/1:38.4042:15:0:0:15:540:-10,-4.51545,0 1/1:35.3939:14:0:0:14:527:-10,-4.21442,0 0/0:41.1002:14:14:489:0:0:0,-4.21442,-10 0/1:99:15:7:266:8:302:-10,0,-10 0/0:41.1002:14:14:503:0:0:0,-4.21442,-10 1/1:26.363:11:0:0:11:416:-10,-3.31133,0 0/0:50.1311:17:17:629:0:0:0,-5.11751,-10 0/1:99:16:5:190:11:417:-10,0,-10 0/0:23.0384:8:8:301:0:0:0,-2.40824,-10 0/0:26.0487:9:9:304:0:0:0,-2.70927,-10 0/0:23.0384:8:8:281:0:0:0,-2.40824,-10 1/1:14.3218:7:0:0:7:266:-10,-2.10721,0 0/0:50.1311:17:17:637:0:0:0,-5.11751,-10 1/1:14.3218:7:0:0:7:266:-10,-2.10721,0 1/1:29.3733:12:0:0:12:429:-10,-3.61236,0 0/1:99:20:10:343:10:378:-10,0,-10 1/1:35.3939:14:0:0:14:527:-10,-4.21442,0 0/1:99:15:4:143:11:418:-10,0,-10 0/1:99:25:13:470:12:434:-10,0,-10 0/0:38.0899:14:13:462:0:0:0,-3.91339,-10 0/0:35.0796:12:12:440:0:0:0,-3.61236,-10 0/1:99:28:15:553:13:481:-10,0,-10 0/1:99:20:10:353:10:353:-10,0,-10 0/1:68.9713:9:2:66:7:252:-10,0,-5.11703 0/1:99:31:17:611:13:489:-10,0,-10 1/1:68.5072:25:0:0:25:901:-10,-7.52575,0 1/1:35.3939:14:0:0:14:525:-10,-4.21442,0 0/1:99:28:10:352:18:660:-10,0,-10 0/0:26.0487:9:9:333:0:0:0,-2.70927,-10 0/1:99:18:4:128:14:514:-10,0,-9.90718 0/0:20.0281:7:7:257:0:0:0,-2.10721,-10 0/0:7.9869:3:3:112:0:0:0,-0.90309,-10 0/1:99:28:15:517:13:471:-10,0,-10 1/1:23.3527:10:0:0:10:357:-10,-3.0103,0 1/1:56.466:21:0:0:21:768:-10,-6.32163,0 0/0:23.0384:8:8:298:0:0:0,-2.40824,-10 0/0:41.1002:14:14:493:0:0:0,-4.21442,-10 0/0:32.0693:11:11:397:0:0:0,-3.31133,-10 0/0:86.2543:29:29:1035:0:0:0,-8.72987,-10 0/0:53.1414:18:18:655:0:0:0,-5.41854,-10 0/0:86.2543:29:29:1052:0:0:0,-8.72987,-10 0/0:50.1311:17:17:626:0:0:0,-5.11751,-10 0/0:47.1208:16:16:605:0:0:0,-4.81648,-10 0/0:89.2641:30:30:1080:0:0:0,-9.0309,-10 0/0:53.1414:18:18:647:0:0:0,-5.41854,-10 0/0:9.37713:11:10:368:1:16:0,-0.669937,-10 0/0:62.1723:21:21:772:0:0:0,-6.32163,-10 0/0:20.0281:7:7:262:0:0:0,-2.10721,-10 1/1:59.4763:22:0:0:22:758:-10,-6.62266,0 1/1:74.5278:27:0:0:27:974:-10,-8.12781,0 1/1:62.4866:23:0:0:23:853:-10,-6.92369,0 1/1:11.3115:6:0:0:6:224:-10,-1.80618,0 1/1:62.4866:23:0:0:23:868:-10,-6.92369,0 0/0:35.0796:12:12:391:0:0:0,-3.61236,-10 0/0:32.0693:11:11:391:0:0:0,-3.31133,-10 0/0:23.0384:8:8:304:0:0:0,-2.40824,-10 0/0:10.9972:4:4:152:0:0:0,-1.20412,-10 0/0:44.1105:15:15:549:0:0:0,-4.51545,-10 0/0:40.2155:30:29:1040:1:38:0,-3.75378,-10 0/0:77.2237:26:26:953:0:0:0,-7.82678,-10 0/0:50.1311:17:17:619:0:0:0,-5.11751,-10 0/0:32.0693:11:11:418:0:0:0,-3.31133,-10 0/0:44.1105:15:15:549:0:0:0,-4.51545,-10 0/0:32.0693:11:11:389:0:0:0,-3.31133,-10 1/1:56.466:21:0:0:21:764:-10,-6.32163,0 1/1:29.3733:12:0:0:12:456:-10,-3.61236,0 0/0:17.0178:6:6:228:0:0:0,-1.80618,-10 0/0:41.1002:14:14:504:0:0:0,-4.21442,-10 0/0:50.1311:17:17:608:0:0:0,-5.11751,-10 0/0:35.0796:12:12:433:0:0:0,-3.61236,-10 scaffold_6 1722905 . C T 1035.99 . AB=0.571429;ABP=6.73282;AC=6;AF=0.0326087;AN=184;AO=49;CIGAR=1X;DP=1474;DPB=1474;DPRA=0.998532;EPP=3.40914;EPPR=3.01183;GTI=3;LEN=1;MEANALT=1.14286;MQM=59.3469;MQMR=59.9923;NS=92;NUMALT=1;ODDS=5.64588;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1665;QR=52129;RO=1423;RPP=109.412;RPPR=2964.1;RUN=1;SAF=23;SAP=3.40914;SAR=26;SRF=696;SRP=4.47677;SRR=727;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.8298:9:9:329:0:0:0,-2.70927,-10 0/0:65.8916:15:15:556:0:0:0,-4.51545,-10 0/0:56.8607:12:12:396:0:0:0,-3.61236,-10 0/0:56.8607:12:12:423:0:0:0,-3.61236,-10 0/0:59.871:13:13:457:0:0:0,-3.91339,-10 0/0:44.8195:8:8:304:0:0:0,-2.40824,-10 0/0:99:35:35:1303:0:0:0,-10,-10 0/0:92.9829:24:24:890:0:0:0,-7.22472,-10 0/0:38.7989:6:6:228:0:0:0,-1.80618,-10 0/0:38.7989:6:6:227:0:0:0,-1.80618,-10 0/0:38.7989:6:6:228:0:0:0,-1.80618,-10 0/0:29.768:3:3:109:0:0:0,-0.90309,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:99:33:33:1227:0:0:0,-9.93399,-10 0/0:80.943:20:20:702:0:0:0,-6.0206,-10 0/0:95.9918:25:25:894:0:0:0,-7.52575,-10 0/0:68.9019:16:16:607:0:0:0,-4.81648,-10 0/0:44.8195:8:8:303:0:0:0,-2.40824,-10 0/0:59.871:13:13:480:0:0:0,-3.91339,-10 0/0:99:37:37:1349:0:0:0,-10,-10 0/0:80.943:20:20:734:0:0:0,-6.0206,-10 0/0:68.9019:16:16:574:0:0:0,-4.81648,-10 0/0:65.8916:15:15:548:0:0:0,-4.51545,-10 0/0:62.8813:14:14:510:0:0:0,-4.21442,-10 0/0:62.8813:14:14:489:0:0:0,-4.21442,-10 0/0:65.8916:15:15:559:0:0:0,-4.51545,-10 0/0:62.8813:14:14:490:0:0:0,-4.21442,-10 0/0:53.8504:11:11:386:0:0:0,-3.31133,-10 0/0:71.9122:17:17:614:0:0:0,-5.11751,-10 0/0:68.9019:16:16:600:0:0:0,-4.81648,-10 0/0:44.8195:8:8:267:0:0:0,-2.40824,-10 0/0:44.8195:9:8:288:0:0:0,-2.40824,-10 0/0:44.8195:8:8:297:0:0:0,-2.40824,-10 0/0:41.8092:7:7:266:0:0:0,-2.10721,-10 0/0:71.9122:17:17:634:0:0:0,-5.11751,-10 0/0:41.8092:7:7:264:0:0:0,-2.10721,-10 0/0:56.8607:12:12:417:0:0:0,-3.61236,-10 0/0:80.943:20:20:734:0:0:0,-6.0206,-10 0/0:62.8813:14:14:523:0:0:0,-4.21442,-10 0/0:65.8916:15:15:568:0:0:0,-4.51545,-10 0/0:95.9918:25:25:913:0:0:0,-7.52575,-10 0/0:62.8813:14:14:481:0:0:0,-4.21442,-10 0/0:56.8607:12:12:434:0:0:0,-3.61236,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:80.943:20:20:716:0:0:0,-6.0206,-10 0/0:47.8298:9:9:331:0:0:0,-2.70927,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:95.9918:25:25:911:0:0:0,-7.52575,-10 0/0:62.8813:14:14:522:0:0:0,-4.21442,-10 0/0:54.4356:28:27:958:1:38:0,-3.18168,-10 0/0:47.8298:9:9:340:0:0:0,-2.70927,-10 0/0:74.9225:18:18:657:0:0:0,-5.41854,-10 0/0:41.8092:7:7:265:0:0:0,-2.10721,-10 0/0:29.768:3:3:114:0:0:0,-0.90309,-10 0/0:99:28:28:1053:0:0:0,-8.42884,-10 0/0:50.8401:10:10:352:0:0:0,-3.0103,-10 0/0:83.9532:21:21:760:0:0:0,-6.32163,-10 0/0:44.8195:8:8:302:0:0:0,-2.40824,-10 0/0:62.8813:14:14:508:0:0:0,-4.21442,-10 0/0:53.8504:11:11:405:0:0:0,-3.31133,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:74.9225:18:18:662:0:0:0,-5.41854,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:71.9122:17:17:633:0:0:0,-5.11751,-10 0/0:68.9019:16:16:599:0:0:0,-4.81648,-10 0/0:99:30:30:1112:0:0:0,-9.0309,-10 0/1:99:18:12:432:6:212:-10,0,-10 0/1:0.0151968:11:0:0:11:375:-10,-3.31133,0 0/1:99:21:14:522:7:222:-10,0,-10 0/1:0.000948243:7:0:0:7:243:-10,-2.10721,0 0/0:86.9639:22:22:773:0:0:0,-6.62266,-10 0/0:99:27:27:1015:0:0:0,-8.12781,-10 0/0:89.9733:23:23:863:0:0:0,-6.92369,-10 0/0:38.7989:6:6:226:0:0:0,-1.80618,-10 0/0:89.9733:23:23:858:0:0:0,-6.92369,-10 0/1:0.0151968:12:0:0:11:372:-10,-3.31133,0 0/0:53.8504:11:11:418:0:0:0,-3.31133,-10 0/0:44.8195:8:8:303:0:0:0,-2.40824,-10 0/0:32.7783:4:4:152:0:0:0,-1.20412,-10 0/0:65.8916:15:15:569:0:0:0,-4.51545,-10 0/0:99:30:30:1076:0:0:0,-9.0309,-10 0/0:98.9993:26:26:934:0:0:0,-7.82678,-10 0/0:71.9122:17:17:635:0:0:0,-5.11751,-10 0/0:53.8504:11:11:411:0:0:0,-3.31133,-10 0/1:99:15:9:333:6:203:-10,0,-10 0/0:53.8504:11:11:400:0:0:0,-3.31133,-10 0/0:83.9532:21:21:752:0:0:0,-6.32163,-10 0/0:56.8607:12:12:451:0:0:0,-3.61236,-10 0/0:38.7989:6:6:228:0:0:0,-1.80618,-10 0/0:62.8813:14:14:499:0:0:0,-4.21442,-10 0/0:71.9122:17:17:638:0:0:0,-5.11751,-10 0/0:56.8607:12:12:456:0:0:0,-3.61236,-10 scaffold_6 1904827 . A G 1317.73 . AB=0.547368;ABP=4.86177;AC=6;AF=0.0322581;AN=186;AO=54;CIGAR=1X;DP=1373;DPB=1373;DPRA=1.14911;EPP=3.6537;EPPR=3.95929;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9545;NS=93;NUMALT=1;ODDS=3.25281;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1988;QR=48871;RO=1318;RPP=120.27;RPPR=2865.01;RUN=1;SAF=29;SAP=3.6537;SAR=25;SRF=647;SRP=3.95929;SRR=671;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.7101:13:13:476:0:0:0,-3.91339,-10 0/0:33.638:6:6:226:0:0:0,-1.80618,-10 0/0:48.6895:11:11:418:0:0:0,-3.31133,-10 0/0:42.6689:9:9:340:0:0:0,-2.70927,-10 0/0:66.7513:17:17:643:0:0:0,-5.11751,-10 0/0:42.6689:9:9:333:0:0:0,-2.70927,-10 0/0:99:38:38:1395:0:0:0,-10,-10 0/0:60.7307:15:15:566:0:0:0,-4.51545,-10 0/0:48.6895:11:11:414:0:0:0,-3.31133,-10 0/0:27.6174:4:4:152:0:0:0,-1.20412,-10 0/0:24.6071:3:3:114:0:0:0,-0.90309,-10 0/0:21.5968:2:2:76:0:0:0,-0.60206,-7.22 0/0:78.7925:21:21:765:0:0:0,-6.32163,-10 0/0:90.834:25:25:927:0:0:0,-7.52575,-10 0/0:57.7204:14:14:495:0:0:0,-4.21442,-10 0/0:57.7204:15:14:505:0:0:0,-4.21442,-10 0/0:81.8027:22:22:811:0:0:0,-6.62266,-10 0/0:48.6895:11:11:414:0:0:0,-3.31133,-10 0/0:99:28:28:1037:0:0:0,-8.42884,-10 0/1:99:32:19:693:13:491:-10,0,-10 0/1:99:11:3:110:8:287:-10,0,-9.17282 0/0:99:40:40:1487:0:0:0,-10,-10 0/0:30.6277:5:5:190:0:0:0,-1.50515,-10 0/0:42.6689:9:9:294:0:0:0,-2.70927,-10 0/0:45.6792:10:10:377:0:0:0,-3.0103,-10 0/0:75.7822:20:20:759:0:0:0,-6.0206,-10 0/0:42.6689:9:9:330:0:0:0,-2.70927,-10 0/0:60.7307:15:15:570:0:0:0,-4.51545,-10 0/0:69.7616:18:18:680:0:0:0,-5.41854,-10 0/0:99:28:28:1053:0:0:0,-8.42884,-10 0/0:36.6483:7:7:266:0:0:0,-2.10721,-10 0/0:30.6277:5:5:190:0:0:0,-1.50515,-10 0/0:66.7513:17:17:643:0:0:0,-5.11751,-10 0/0:45.6792:10:10:380:0:0:0,-3.0103,-10 0/1:0.0484184:11:0:0:11:417:-10,-3.31133,0 0/0:36.6483:7:7:266:0:0:0,-2.10721,-10 0/0:42.6689:9:9:337:0:0:0,-2.70927,-10 0/1:99:16:10:350:6:226:-10,0,-10 0/0:54.7101:13:13:491:0:0:0,-3.91339,-10 0/1:99:17:11:376:6:205:-10,0,-10 0/0:81.8027:22:22:827:0:0:0,-6.62266,-10 0/0:60.7307:15:15:570:0:0:0,-4.51545,-10 0/1:0.00602287:8:0:0:8:290:-10,-2.40824,0 0/0:43.6264:24:23:840:1:34:0,-2.44451,-10 0/0:54.7101:13:13:493:0:0:0,-3.91339,-10 0/0:54.7101:13:13:481:0:0:0,-3.91339,-10 0/0:99:31:31:1166:0:0:0,-9.33193,-10 0/0:75.7822:20:20:754:0:0:0,-6.0206,-10 0/0:48.6895:11:11:403:0:0:0,-3.31133,-10 0/0:99:30:30:1134:0:0:0,-9.0309,-10 0/0:33.638:6:6:228:0:0:0,-1.80618,-10 0/0:93.8445:26:26:972:0:0:0,-7.82678,-10 0/0:36.6483:7:7:265:0:0:0,-2.10721,-10 0/0:36.6483:7:7:243:0:0:0,-2.10721,-10 0/0:99:48:48:1805:0:0:0,-10,-10 0/0:51.6998:12:12:437:0:0:0,-3.61236,-10 0/0:0.154163:15:14:524:1:38:-0.460641,0,-10 0/0:24.6071:3:3:113:0:0:0,-0.90309,-10 0/0:60.7307:15:15:565:0:0:0,-4.51545,-10 0/0:33.638:6:6:228:0:0:0,-1.80618,-10 0/0:81.8027:22:22:819:0:0:0,-6.62266,-10 0/0:63.741:16:16:581:0:0:0,-4.81648,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:66.7513:17:17:642:0:0:0,-5.11751,-10 0/0:42.6689:9:9:305:0:0:0,-2.70927,-10 0/0:87.823:24:24:907:0:0:0,-7.22472,-10 0/0:63.741:16:16:593:0:0:0,-4.81648,-10 0/0:45.6792:10:10:379:0:0:0,-3.0103,-10 0/0:81.8027:22:22:782:0:0:0,-6.62266,-10 0/0:45.6792:10:10:335:0:0:0,-3.0103,-10 0/0:51.6998:12:12:446:0:0:0,-3.61236,-10 0/0:51.6998:12:12:446:0:0:0,-3.61236,-10 0/0:63.741:16:16:591:0:0:0,-4.81648,-10 0/0:57.7204:14:14:509:0:0:0,-4.21442,-10 0/0:63.741:16:16:600:0:0:0,-4.81648,-10 0/0:54.7101:13:13:493:0:0:0,-3.91339,-10 0/0:48.6895:11:11:415:0:0:0,-3.31133,-10 0/0:42.6689:9:9:316:0:0:0,-2.70927,-10 0/0:18.5865:1:1:38:0:0:0,-0.30103,-3.8 0/0:39.6586:8:8:304:0:0:0,-2.40824,-10 0/0:90.834:25:25:919:0:0:0,-7.52575,-10 0/0:90.834:25:25:925:0:0:0,-7.52575,-10 0/0:57.7204:14:14:519:0:0:0,-4.21442,-10 0/0:72.7719:19:19:714:0:0:0,-5.71957,-10 0/0:72.7719:19:19:690:0:0:0,-5.71957,-10 0/0:27.6174:4:4:152:0:0:0,-1.20412,-10 0/0:51.6998:12:12:443:0:0:0,-3.61236,-10 0/0:57.7204:14:14:531:0:0:0,-4.21442,-10 0/0:30.6277:5:5:173:0:0:0,-1.50515,-10 0/0:39.6586:8:8:304:0:0:0,-2.40824,-10 0/0:45.6792:10:10:367:0:0:0,-3.0103,-10 0/0:45.6792:10:10:333:0:0:0,-3.0103,-10 scaffold_6 2171713 . G C 825.341 . AB=0.586207;ABP=4.88226;AC=3;AF=0.0163043;AN=184;AO=34;CIGAR=1X;DP=1585;DPB=1585;DPRA=1.34503;EPP=9.39698;EPPR=3.24783;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9709;NS=92;NUMALT=1;ODDS=0.229885;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1240;QR=56462;RO=1545;RPP=76.8404;RPPR=3349.25;RUN=1;SAF=22;SAP=9.39698;SAR=12;SRF=765;SRP=3.32653;SRR=780;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:51.4213:13:13:452:0:0:0,-3.91339,-10 0/0:39.3801:9:9:338:0:0:0,-2.70927,-10 0/0:72.4934:20:20:680:0:0:0,-6.0206,-10 0/0:24.3286:4:4:117:0:0:0,-1.20412,-10 0/0:51.4213:13:13:492:0:0:0,-3.91339,-10 0/0:33.3595:7:7:263:0:0:0,-2.10721,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:96.5722:28:28:1016:0:0:0,-8.42884,-10 0/0:42.3904:10:10:379:0:0:0,-3.0103,-10 0/0:24.3286:4:4:138:0:0:0,-1.20412,-10 0/0:30.3492:6:6:218:0:0:0,-1.80618,-10 0/0:24.3286:4:4:152:0:0:0,-1.20412,-10 0/0:81.5242:23:23:859:0:0:0,-6.92369,-10 0/0:90.5543:26:26:964:0:0:0,-7.82678,-10 0/0:75.5037:21:21:786:0:0:0,-6.32163,-10 0/0:63.4625:18:17:637:0:0:0,-5.11751,-10 0/0:96.5722:28:28:983:0:0:0,-8.42884,-10 0/0:42.3904:10:10:371:0:0:0,-3.0103,-10 0/0:42.3904:10:10:341:0:0:0,-3.0103,-10 0/0:99:34:34:1256:0:0:0,-10,-10 0/0:48.411:13:12:432:0:0:0,-3.61236,-10 0/0:75.5037:21:21:797:0:0:0,-6.32163,-10 0/0:24.3286:4:4:152:0:0:0,-1.20412,-10 0/0:57.4419:15:15:556:0:0:0,-4.51545,-10 0/0:63.4625:17:17:636:0:0:0,-5.11751,-10 0/0:66.4728:18:18:639:0:0:0,-5.41854,-10 0/0:54.4316:14:14:522:0:0:0,-4.21442,-10 0/0:57.4419:15:15:562:0:0:0,-4.51545,-10 0/0:78.5139:22:22:808:0:0:0,-6.62266,-10 0/0:99:40:40:1489:0:0:0,-10,-10 0/0:21.3183:3:3:114:0:0:0,-0.90309,-10 0/0:21.3183:3:3:105:0:0:0,-0.90309,-9.8 0/0:75.5037:21:21:783:0:0:0,-6.32163,-10 0/0:42.3904:10:10:377:0:0:0,-3.0103,-10 0/0:54.4316:14:14:470:0:0:0,-4.21442,-10 0/0:30.3492:6:6:227:0:0:0,-1.80618,-10 0/0:51.4213:13:13:454:0:0:0,-3.91339,-10 0/0:96.5722:28:28:1009:0:0:0,-8.42884,-10 0/0:75.5037:21:21:756:0:0:0,-6.32163,-10 0/0:57.4419:15:15:543:0:0:0,-4.51545,-10 0/0:84.5344:24:24:866:0:0:0,-7.22472,-10 0/0:87.5444:25:25:894:0:0:0,-7.52575,-10 0/0:81.5242:23:23:836:0:0:0,-6.92369,-10 0/0:99:36:36:1310:0:0:0,-10,-10 0/0:69.4831:19:19:670:0:0:0,-5.71957,-10 0/0:57.4419:15:15:569:0:0:0,-4.51545,-10 0/0:99:38:38:1397:0:0:0,-10,-10 0/0:96.5722:28:28:1030:0:0:0,-8.42884,-10 0/0:51.4213:13:13:489:0:0:0,-3.91339,-10 0/0:99:35:35:1283:0:0:0,-10,-10 0/0:48.411:12:12:444:0:0:0,-3.61236,-10 0/0:99:29:29:1032:0:0:0,-8.72987,-10 0/0:66.4728:18:18:668:0:0:0,-5.41854,-10 0/0:39.3801:9:9:340:0:0:0,-2.70927,-10 0/0:99:35:35:1273:0:0:0,-10,-10 0/0:33.3595:7:7:245:0:0:0,-2.10721,-10 0/0:72.4934:20:20:752:0:0:0,-6.0206,-10 0/0:24.3286:4:4:146:0:0:0,-1.20412,-10 0/0:72.4934:20:20:710:0:0:0,-6.0206,-10 0/0:45.4007:11:11:415:0:0:0,-3.31133,-10 0/0:78.5139:22:22:767:0:0:0,-6.62266,-10 0/0:45.4007:11:11:400:0:0:0,-3.31133,-10 0/0:99:41:39:1446:0:0:0,-10,-10 0/0:63.4625:17:17:631:0:0:0,-5.11751,-10 0/0:42.3904:10:10:348:0:0:0,-3.0103,-10 0/0:84.5344:24:24:879:0:0:0,-7.22472,-10 0/0:36.3698:8:8:292:0:0:0,-2.40824,-10 0/0:30.3492:6:6:220:0:0:0,-1.80618,-10 0/0:99:33:33:1238:0:0:0,-9.93399,-10 0/0:39.3801:9:9:320:0:0:0,-2.70927,-10 0/0:66.4728:18:18:639:0:0:0,-5.41854,-10 0/0:81.5242:23:23:874:0:0:0,-6.92369,-10 0/0:84.5344:24:24:868:0:0:0,-7.22472,-10 1/1:3.74778:17:0:0:17:636:-10,-5.11751,0 0/1:99:29:12:423:17:604:-10,0,-10 0/0:45.4007:11:11:389:0:0:0,-3.31133,-10 0/0:30.3492:6:6:223:0:0:0,-1.80618,-10 0/0:42.3904:10:10:375:0:0:0,-3.0103,-10 0/0:33.3595:7:7:266:0:0:0,-2.10721,-10 0/0:36.3698:8:8:304:0:0:0,-2.40824,-10 0/0:96.5722:28:28:1015:0:0:0,-8.42884,-10 0/0:75.5037:21:21:771:0:0:0,-6.32163,-10 0/0:75.5037:21:21:785:0:0:0,-6.32163,-10 0/0:54.4316:14:14:530:0:0:0,-4.21442,-10 0/0:81.5242:23:23:833:0:0:0,-6.92369,-10 0/0:39.3801:9:9:311:0:0:0,-2.70927,-10 0/0:54.4316:14:14:531:0:0:0,-4.21442,-10 0/0:60.4522:16:16:570:0:0:0,-4.81648,-10 0/0:21.3183:3:3:104:0:0:0,-0.90309,-9.70667 0/0:57.4419:16:15:563:0:0:0,-4.51545,-10 0/0:63.4625:18:17:623:0:0:0,-5.11751,-10 0/0:48.411:12:12:417:0:0:0,-3.61236,-10 scaffold_6 2203635 . G C 465.689 . AB=0.514286;ABP=3.07234;AC=1;AF=0.00543478;AN=184;AO=19;CIGAR=1X;DP=2161;DPB=2161;DPRA=1.41766;EPP=4.03889;EPPR=6.54745;GTI=0;LEN=1;MEANALT=1;MQM=59.3158;MQMR=59.9715;NS=92;NUMALT=1;ODDS=7.91367;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=667;QR=78456;RO=2137;RPP=36.0395;RPPR=3854.97;RUN=1;SAF=9;SAP=3.12459;SAR=10;SRF=1075;SRP=3.18203;SRR=1062;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:28:28:1007:0:0:0,-8.42884,-10 0/0:61.466:13:13:485:0:0:0,-3.91339,-10 0/0:94.5769:24:24:882:0:0:0,-7.22472,-10 0/0:67.4866:15:15:523:0:0:0,-4.51545,-10 0/0:70.4969:16:16:580:0:0:0,-4.81648,-10 0/0:61.466:13:13:483:0:0:0,-3.91339,-10 0/0:99:49:49:1792:0:0:0,-10,-10 0/0:99:30:30:1048:0:0:0,-9.0309,-10 0/0:76.5175:18:18:670:0:0:0,-5.41854,-10 0/0:34.3733:4:4:152:0:0:0,-1.20412,-10 0/0:34.3733:4:4:152:0:0:0,-1.20412,-10 0/0:46.4145:8:8:258:0:0:0,-2.40824,-10 0/0:99:35:34:1274:0:0:0,-10,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:99:33:33:1168:0:0:0,-9.93399,-10 0/0:94.5769:24:24:879:0:0:0,-7.22472,-10 0/0:99:38:37:1389:0:0:0,-10,-10 0/0:70.4969:16:16:576:0:0:0,-4.81648,-10 0/1:99:35:17:595:18:652:-10,0,-10 0/0:99:38:38:1422:0:0:0,-10,-10 0/0:61.466:13:13:457:0:0:0,-3.91339,-10 0/0:99:37:37:1403:0:0:0,-10,-10 0/0:70.4969:16:16:571:0:0:0,-4.81648,-10 0/0:97.5849:25:25:939:0:0:0,-7.52575,-10 0/0:76.5175:18:18:631:0:0:0,-5.41854,-10 0/0:88.5588:22:22:800:0:0:0,-6.62266,-10 0/0:88.5588:22:22:810:0:0:0,-6.62266,-10 0/0:64.4763:14:14:519:0:0:0,-4.21442,-10 0/0:85.5485:21:21:757:0:0:0,-6.32163,-10 0/0:99:37:37:1394:0:0:0,-10,-10 0/0:52.4351:10:10:380:0:0:0,-3.0103,-10 0/0:49.4248:9:9:318:0:0:0,-2.70927,-10 0/0:94.5769:24:24:898:0:0:0,-7.22472,-10 0/0:49.4248:9:9:339:0:0:0,-2.70927,-10 0/0:76.5175:18:18:681:0:0:0,-5.41854,-10 0/0:52.4351:10:10:358:0:0:0,-3.0103,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/0:99:37:37:1355:0:0:0,-10,-10 0/0:91.5678:23:23:871:0:0:0,-6.92369,-10 0/0:67.4866:15:15:530:0:0:0,-4.51545,-10 0/0:99:33:33:1203:0:0:0,-9.93399,-10 0/0:99:30:30:1110:0:0:0,-9.0309,-10 0/0:58.4557:12:12:442:0:0:0,-3.61236,-10 0/0:99:47:46:1649:0:0:0,-10,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:82.5381:20:20:747:0:0:0,-6.0206,-10 0/0:99:39:39:1463:0:0:0,-10,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:58.4557:12:12:456:0:0:0,-3.61236,-10 0/0:99:42:42:1494:0:0:0,-10,-10 0/0:85.5485:21:21:784:0:0:0,-6.32163,-10 0/0:99:48:48:1766:0:0:0,-10,-10 0/0:79.5278:19:19:687:0:0:0,-5.71957,-10 0/0:46.4145:8:8:300:0:0:0,-2.40824,-10 0/0:99:53:53:1953:0:0:0,-10,-10 0/0:67.4866:15:15:570:0:0:0,-4.51545,-10 0/0:82.5381:20:20:723:0:0:0,-6.0206,-10 0/0:67.4866:15:15:535:0:0:0,-4.51545,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:67.4866:15:15:532:0:0:0,-4.51545,-10 0/0:94.5769:24:24:898:0:0:0,-7.22472,-10 0/0:97.5849:25:25:925:0:0:0,-7.52575,-10 0/0:99:40:40:1476:0:0:0,-10,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:76.5175:18:18:682:0:0:0,-5.41854,-10 0/0:99:52:52:1969:0:0:0,-10,-10 0/0:91.5678:23:23:851:0:0:0,-6.92369,-10 0/0:61.466:13:13:471:0:0:0,-3.91339,-10 0/0:99:33:33:1237:0:0:0,-9.93399,-10 0/0:43.4042:7:7:262:0:0:0,-2.10721,-10 0/0:55.4454:11:11:411:0:0:0,-3.31133,-10 0/0:99:41:40:1480:0:0:0,-10,-10 0/0:99:37:37:1353:0:0:0,-10,-10 0/0:73.5072:17:17:626:0:0:0,-5.11751,-10 0/0:88.4611:31:30:1091:1:15:0,-6.34057,-10 0/0:58.4557:12:12:456:0:0:0,-3.61236,-10 0/0:64.4763:14:14:491:0:0:0,-4.21442,-10 0/0:67.4866:15:15:529:0:0:0,-4.51545,-10 0/0:40.3939:6:6:197:0:0:0,-1.80618,-10 0/0:64.4763:14:14:508:0:0:0,-4.21442,-10 0/0:99:40:40:1465:0:0:0,-10,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:99:38:38:1419:0:0:0,-10,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:46.4145:8:8:301:0:0:0,-2.40824,-10 0/0:88.5588:22:22:811:0:0:0,-6.62266,-10 0/0:64.4763:15:14:487:0:0:0,-4.21442,-10 0/0:40.3939:6:6:204:0:0:0,-1.80618,-10 0/0:73.5072:17:17:635:0:0:0,-5.11751,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:61.466:13:13:460:0:0:0,-3.91339,-10 scaffold_6 2203661 . C G 8348.79 . AB=0.49835;ABP=3.01747;AC=21;AF=0.11413;AN=184;AO=301;CIGAR=1X;DP=2140;DPB=2140;DPRA=1.37842;EPP=4.63349;EPPR=3.0292;GTI=0;LEN=1;MEANALT=1;MQM=59.9834;MQMR=59.9695;NS=92;NUMALT=1;ODDS=2.52907;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10953;QR=67064;RO=1838;RPP=656.623;RPPR=3994.18;RUN=1;SAF=143;SAP=4.63349;SAR=158;SRF=921;SRP=3.0292;SRR=917;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:84.1596:28:28:951:0:0:0,-8.42884,-10 0/0:39.0052:13:13:481:0:0:0,-3.91339,-10 0/0:72.1185:24:24:862:0:0:0,-7.22472,-10 0/0:45.0258:15:15:520:0:0:0,-4.51545,-10 0/0:48.0361:16:16:603:0:0:0,-4.81648,-10 0/0:39.0052:13:13:486:0:0:0,-3.91339,-10 0/0:99:47:47:1707:0:0:0,-10,-10 0/1:99:30:15:544:15:528:-10,0,-10 1/1:37.8272:18:0:0:18:633:-10,-5.41854,0 0/0:11.9125:4:4:152:0:0:0,-1.20412,-10 0/0:11.9125:4:4:152:0:0:0,-1.20412,-10 0/0:23.9537:8:8:263:0:0:0,-2.40824,-10 0/1:99:35:19:705:16:592:-10,0,-10 0/1:99:27:20:722:7:197:-10,0,-10 0/0:96.1987:32:32:1161:0:0:0,-9.63296,-10 0/0:72.1185:24:24:855:0:0:0,-7.22472,-10 0/0:99:38:38:1417:0:0:0,-10,-10 0/0:45.0258:15:15:540:0:0:0,-4.51545,-10 0/0:99:34:34:1240:0:0:0,-10,-10 0/1:99:35:15:524:20:729:-10,0,-10 0/0:39.0052:13:13:456:0:0:0,-3.91339,-10 1/1:95.0212:37:0:0:37:1369:-10,-10,0 0/0:48.0361:16:16:566:0:0:0,-4.81648,-10 0/0:75.1288:25:25:929:0:0:0,-7.52575,-10 0/0:54.0567:18:18:672:0:0:0,-5.41854,-10 0/1:99:21:12:416:9:320:-10,0,-10 0/0:66.0979:22:22:774:0:0:0,-6.62266,-10 0/0:42.0155:14:14:515:0:0:0,-4.21442,-10 0/0:63.0876:21:21:754:0:0:0,-6.32163,-10 0/0:99:37:37:1375:0:0:0,-10,-10 0/0:29.9743:10:10:379:0:0:0,-3.0103,-10 0/0:26.964:9:9:333:0:0:0,-2.70927,-10 1/1:55.889:24:0:0:24:875:-10,-7.22472,0 0/0:26.964:9:9:342:0:0:0,-2.70927,-10 0/0:54.0567:18:18:667:0:0:0,-5.41854,-10 0/0:29.9743:10:10:379:0:0:0,-3.0103,-10 0/0:81.1493:27:27:997:0:0:0,-8.12781,-10 0/1:99:36:11:400:25:916:-10,0,-10 0/0:69.1082:23:23:860:0:0:0,-6.92369,-10 0/0:45.0258:15:15:486:0:0:0,-4.51545,-10 0/0:99:33:33:1220:0:0:0,-9.93399,-10 0/0:90.1798:30:30:1074:0:0:0,-9.0309,-10 0/0:35.9949:12:12:448:0:0:0,-3.61236,-10 0/0:99:46:46:1673:0:0:0,-10,-10 0/1:99:28:14:488:14:530:-10,0,-10 0/0:60.0773:20:20:731:0:0:0,-6.0206,-10 0/0:99:39:39:1450:0:0:0,-10,-10 0/0:81.1493:27:27:984:0:0:0,-8.12781,-10 0/0:35.9949:12:12:450:0:0:0,-3.61236,-10 0/0:99:42:42:1528:0:0:0,-10,-10 0/0:63.0876:21:21:786:0:0:0,-6.32163,-10 0/0:99:48:48:1731:0:0:0,-10,-10 0/0:57.067:19:19:710:0:0:0,-5.71957,-10 0/0:23.9537:8:8:304:0:0:0,-2.40824,-10 0/0:99:53:52:1921:0:0:0,-10,-10 0/0:45.0258:15:15:570:0:0:0,-4.51545,-10 0/0:57.067:19:19:686:0:0:0,-5.71957,-10 1/1:25.786:14:0:0:14:502:-10,-4.21442,0 0/0:81.1493:27:27:1000:0:0:0,-8.12781,-10 0/0:45.0258:15:15:557:0:0:0,-4.51545,-10 0/0:72.1185:24:24:886:0:0:0,-7.22472,-10 0/0:75.1288:25:25:933:0:0:0,-7.52575,-10 1/1:99:39:0:0:39:1462:-10,-10,0 0/0:90.1798:30:30:1082:0:0:0,-9.0309,-10 1/1:37.8272:18:0:0:18:677:-10,-5.41854,0 0/1:99:52:26:982:26:933:-10,0,-10 0/0:69.1082:23:23:846:0:0:0,-6.92369,-10 0/0:35.9949:12:12:433:0:0:0,-3.61236,-10 0/0:99:33:33:1194:0:0:0,-9.93399,-10 0/0:20.9434:7:7:263:0:0:0,-2.10721,-10 0/0:32.9846:11:11:416:0:0:0,-3.31133,-10 0/0:99:41:41:1457:0:0:0,-10,-10 0/0:99:37:37:1340:0:0:0,-10,-10 0/0:51.0464:17:17:607:0:0:0,-5.11751,-10 0/0:93.1895:31:31:1126:0:0:0,-9.33193,-10 0/0:35.9949:12:12:455:0:0:0,-3.61236,-10 0/0:42.0155:14:14:494:0:0:0,-4.21442,-10 0/0:45.0258:15:15:542:0:0:0,-4.51545,-10 0/0:17.9331:6:6:217:0:0:0,-1.80618,-10 0/0:42.0155:14:14:525:0:0:0,-4.21442,-10 0/1:99:39:20:713:19:690:-10,0,-10 0/0:93.1895:31:31:1155:0:0:0,-9.33193,-10 0/0:99:33:33:1162:0:0:0,-9.93399,-10 0/0:99:38:38:1412:0:0:0,-10,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:23.9537:8:8:300:0:0:0,-2.40824,-10 0/0:66.0979:22:22:807:0:0:0,-6.62266,-10 0/0:45.0258:15:15:548:0:0:0,-4.51545,-10 0/0:17.9331:6:6:218:0:0:0,-1.80618,-10 0/0:51.0464:17:17:621:0:0:0,-5.11751,-10 0/0:93.1895:31:31:1128:0:0:0,-9.33193,-10 0/0:39.0052:13:13:472:0:0:0,-3.91339,-10 scaffold_6 2236448 . C A 606.612 . AB=0.479167;ABP=3.19126;AC=1;AF=0.00537634;AN=186;AO=23;CIGAR=1X;DP=2169;DPB=2169;DPRA=2.08204;EPP=7.63648;EPPR=5.6434;GTI=0;LEN=1;MEANALT=1;MQM=59.913;MQMR=59.9385;NS=93;NUMALT=1;ODDS=2.29573;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=854;QR=78625;RO=2145;RPP=52.9542;RPPR=4480.2;RUN=1;SAF=15;SAP=7.63648;SAR=8;SRF=1079;SRP=3.18139;SRR=1066;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.9512:18:18:675:0:0:0,-5.41854,-10 0/0:37.8688:10:10:356:0:0:0,-3.0103,-10 0/0:80.0129:24:24:886:0:0:0,-7.22472,-10 0/0:58.9409:17:17:641:0:0:0,-5.11751,-10 0/0:67.9718:20:20:741:0:0:0,-6.0206,-10 0/0:25.8276:6:6:218:0:0:0,-1.80618,-10 0/0:99:48:48:1740:0:0:0,-10,-10 0/0:83.0232:25:25:901:0:0:0,-7.52575,-10 0/0:58.9409:17:17:643:0:0:0,-5.11751,-10 0/0:13.7864:2:2:76:0:0:0,-0.60206,-7.22 0/0:22.8173:5:5:168:0:0:0,-1.50515,-10 0/0:25.8276:6:6:217:0:0:0,-1.80618,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:99:49:49:1798:0:0:0,-10,-10 0/0:89.0435:27:27:982:0:0:0,-8.12781,-10 0/0:61.9512:18:18:642:0:0:0,-5.41854,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:31.8482:8:8:304:0:0:0,-2.40824,-10 0/0:98.0718:30:30:1068:0:0:0,-9.0309,-10 0/0:99:43:43:1553:0:0:0,-10,-10 0/0:67.9718:20:20:731:0:0:0,-6.0206,-10 0/0:99:40:40:1402:0:0:0,-10,-10 0/0:52.9203:15:15:570:0:0:0,-4.51545,-10 0/0:83.0232:25:25:927:0:0:0,-7.52575,-10 0/0:92.0534:28:28:1038:0:0:0,-8.42884,-10 0/0:99:33:32:1183:0:0:0,-9.63296,-10 0/0:89.0435:27:27:997:0:0:0,-8.12781,-10 0/0:46.8997:13:13:478:0:0:0,-3.91339,-10 0/0:92.0534:28:28:1026:0:0:0,-8.42884,-10 0/0:99:40:40:1428:0:0:0,-10,-10 0/0:22.8173:5:5:190:0:0:0,-1.50515,-10 0/0:46.8997:13:13:482:0:0:0,-3.91339,-10 0/0:77.0026:23:23:859:0:0:0,-6.92369,-10 0/0:70.9821:21:21:770:0:0:0,-6.32163,-10 0/0:98.0718:30:30:1129:0:0:0,-9.0309,-10 0/0:46.8997:13:13:491:0:0:0,-3.91339,-10 0/0:55.9306:16:16:586:0:0:0,-4.81648,-10 0/0:99:40:40:1474:0:0:0,-10,-10 0/0:64.9615:19:19:720:0:0:0,-5.71957,-10 0/0:64.9615:19:19:700:0:0:0,-5.71957,-10 0/0:99:43:43:1544:0:0:0,-10,-10 0/0:61.9512:18:18:660:0:0:0,-5.41854,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:99:40:40:1425:0:0:0,-10,-10 0/0:83.0232:25:25:908:0:0:0,-7.52575,-10 0/0:55.9306:16:16:601:0:0:0,-4.81648,-10 0/0:99:45:45:1669:0:0:0,-10,-10 0/0:92.0534:28:28:1031:0:0:0,-8.42884,-10 0/0:16.7967:3:3:114:0:0:0,-0.90309,-10 0/0:99:36:36:1259:0:0:0,-10,-10 0/0:58.9409:17:17:612:0:0:0,-5.11751,-10 0/0:99:39:39:1381:0:0:0,-10,-10 0/0:67.9718:20:20:759:0:0:0,-6.0206,-10 0/0:34.8585:9:9:342:0:0:0,-2.70927,-10 0/0:99:37:37:1325:0:0:0,-10,-10 0/0:55.9306:16:16:603:0:0:0,-4.81648,-10 0/0:98.0718:30:30:1120:0:0:0,-9.0309,-10 0/0:43.8894:12:12:442:0:0:0,-3.61236,-10 0/0:83.0232:25:25:899:0:0:0,-7.52575,-10 0/0:52.9203:15:15:567:0:0:0,-4.51545,-10 0/0:99:32:32:1213:0:0:0,-9.63296,-10 0/0:49.91:14:14:508:0:0:0,-4.21442,-10 0/1:99:48:25:923:23:854:-10,0,-10 0/0:77.0026:23:23:856:0:0:0,-6.92369,-10 0/0:55.9306:16:16:600:0:0:0,-4.81648,-10 0/0:99:42:42:1568:0:0:0,-10,-10 0/0:70.9821:21:21:789:0:0:0,-6.32163,-10 0/0:86.0334:26:26:951:0:0:0,-7.82678,-10 0/0:99:41:41:1503:0:0:0,-10,-10 0/0:43.8894:12:12:434:0:0:0,-3.61236,-10 0/0:70.9821:21:21:781:0:0:0,-6.32163,-10 0/0:99:43:43:1566:0:0:0,-10,-10 0/0:95.063:29:29:1036:0:0:0,-8.72987,-10 0/0:61.9512:18:18:677:0:0:0,-5.41854,-10 0/0:89.0435:27:27:1006:0:0:0,-8.12781,-10 0/0:58.9409:17:17:619:0:0:0,-5.11751,-10 0/0:61.9512:18:18:662:0:0:0,-5.41854,-10 0/0:40.8791:11:11:418:0:0:0,-3.31133,-10 0/0:31.8482:8:8:292:0:0:0,-2.40824,-10 0/0:52.9203:15:15:566:0:0:0,-4.51545,-10 0/0:99:47:47:1720:0:0:0,-10,-10 0/0:99:39:39:1417:0:0:0,-10,-10 0/0:73.9924:22:22:835:0:0:0,-6.62266,-10 0/0:99:32:32:1164:0:0:0,-9.63296,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:25.8276:6:6:216:0:0:0,-1.80618,-10 0/0:61.9512:18:18:634:0:0:0,-5.41854,-10 0/0:52.9203:15:15:541:0:0:0,-4.51545,-10 0/0:25.8276:6:6:219:0:0:0,-1.80618,-10 0/0:67.9718:20:20:739:0:0:0,-6.0206,-10 0/0:49.91:14:14:510:0:0:0,-4.21442,-10 0/0:64.9615:19:19:655:0:0:0,-5.71957,-10 scaffold_6 2466018 . A G 9025.75 . AB=0.436306;ABP=14.0751;AC=46;AF=0.25;AN=184;AO=327;CIGAR=1X;DP=1327;DPB=1327;DPRA=1.21968;EPP=5.40755;EPPR=3.019;GTI=2;LEN=1;MEANALT=1.03125;MQM=59.9541;MQMR=59.8587;NS=92;NUMALT=1;ODDS=0.0555998;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12020;QR=36528;RO=998;RPP=687.263;RPPR=2109.76;RUN=1;SAF=151;SAP=7.16067;SAR=176;SRF=493;SRP=3.32362;SRR=505;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:37.292:10:10:332:0:0:0,-3.0103,-10 0/0:40.3023:11:11:418:0:0:0,-3.31133,-10 0/0:61.3744:18:18:665:0:0:0,-5.41854,-10 0/0:58.3641:17:17:608:0:0:0,-5.11751,-10 0/0:61.3744:18:18:638:0:0:0,-5.41854,-10 0/0:37.292:10:10:377:0:0:0,-3.0103,-10 0/0:79.4361:24:24:877:0:0:0,-7.22472,-10 0/0:58.3641:17:17:624:0:0:0,-5.11751,-10 0/0:31.2714:8:8:304:0:0:0,-2.40824,-10 0/0:19.2302:4:4:152:0:0:0,-1.20412,-10 0/1:0.297264:6:0:0:6:227:-10,-1.80618,0 0/0:19.2302:4:4:130:0:0:0,-1.20412,-10 0/1:99:17:8:301:9:339:-10,0,-10 0/1:99:25:14:512:11:387:-10,0,-10 0/0:76.4259:23:23:791:0:0:0,-6.92369,-10 0/0:58.3641:17:17:623:0:0:0,-5.11751,-10 0/0:64.3847:19:19:699:0:0:0,-5.71957,-10 0/0:34.2817:9:9:318:0:0:0,-2.70927,-10 1/1:25.3024:13:0:0:13:490:-10,-3.91339,0 0/0:42.6001:20:19:703:1:14:0,-3.31957,-10 0/1:20.1435:11:10:372:1:37:-1.43006,0,-10 0/0:85.4566:26:26:963:0:0:0,-7.82678,-10 1/1:13.2612:9:0:0:9:332:-10,-2.70927,0 0/1:99:12:7:266:5:190:-10,0,-10 1/1:40.3539:18:0:0:18:650:-10,-5.41854,0 0/1:99:21:11:403:10:351:-10,0,-10 1/1:25.3024:13:0:0:13:468:-10,-3.91339,0 1/1:25.3024:13:0:0:13:456:-10,-3.91339,0 1/1:25.3024:13:0:0:13:479:-10,-3.91339,0 0/1:99:29:18:671:11:371:-10,0,-10 0/0:13.2096:2:2:76:0:0:0,-0.60206,-7.22 1/1:10.2509:8:0:0:8:303:-10,-2.40824,0 0/0:46.3229:13:13:458:0:0:0,-3.91339,-10 0/0:31.2714:8:8:299:0:0:0,-2.40824,-10 0/0:37.292:10:10:377:0:0:0,-3.0103,-10 0/0:31.2714:8:8:300:0:0:0,-2.40824,-10 0/1:0.0724303:4:0:0:4:152:-10,-1.20412,0 0/0:82.4464:25:25:938:0:0:0,-7.52575,-10 0/0:43.3126:12:12:452:0:0:0,-3.61236,-10 0/1:99:20:9:342:11:415:-10,0,-10 1/1:28.3127:14:0:0:14:519:-10,-4.21442,0 0/0:46.3229:13:13:452:0:0:0,-3.91339,-10 0/0:61.3744:18:18:640:0:0:0,-5.41854,-10 0/1:99:17:11:400:6:228:-10,0,-10 1/1:25.3024:13:0:0:13:493:-10,-3.91339,0 0/1:99:15:9:320:6:228:-10,0,-10 0/1:99:25:18:680:7:260:-10,0,-10 1/1:52.3951:22:0:0:22:802:-10,-6.62266,0 1/1:7.24057:7:0:0:7:259:-10,-2.10721,0 0/1:99:25:9:340:15:567:-10,0,-10 0/0:31.2714:8:8:302:0:0:0,-2.40824,-10 0/1:99:29:18:629:11:415:-10,0,-10 1/1:7.24057:7:0:0:7:266:-10,-2.10721,0 0/0:22.2405:5:5:184:0:0:0,-1.50515,-10 0/1:99:34:17:625:17:623:-10,0,-10 0/0:43.3126:12:12:424:0:0:0,-3.61236,-10 1/1:16.2715:10:0:0:10:374:-10,-3.0103,0 0/0:37.292:10:10:369:0:0:0,-3.0103,-10 0/0:55.3538:16:16:555:0:0:0,-4.81648,-10 0/0:43.3126:12:12:454:0:0:0,-3.61236,-10 0/1:99:24:17:632:7:243:-10,0,-10 0/0:34.2817:9:9:336:0:0:0,-2.70927,-10 0/0:76.4259:23:23:862:0:0:0,-6.92369,-10 0/0:61.3744:18:18:681:0:0:0,-5.41854,-10 0/0:55.3538:16:16:559:0:0:0,-4.81648,-10 0/0:43.3126:12:12:434:0:0:0,-3.61236,-10 0/0:70.4053:21:21:788:0:0:0,-6.32163,-10 0/0:22.2405:6:5:185:0:0:0,-1.50515,-10 0/0:82.4464:25:25:895:0:0:0,-7.52575,-10 0/0:19.2302:4:4:152:0:0:0,-1.20412,-10 0/0:49.3332:14:14:481:0:0:0,-4.21442,-10 0/0:55.3538:16:16:579:0:0:0,-4.81648,-10 0/0:55.3538:16:16:594:0:0:0,-4.81648,-10 0/0:43.3126:12:12:444:0:0:0,-3.61236,-10 0/0:82.4464:25:25:902:0:0:0,-7.52575,-10 0/0:25.2508:6:6:228:0:0:0,-1.80618,-10 0/0:43.3126:12:12:456:0:0:0,-3.61236,-10 0/0:28.2611:7:7:259:0:0:0,-2.10721,-10 0/0:19.2302:4:4:126:0:0:0,-1.20412,-10 0/0:16.2199:3:3:113:0:0:0,-0.90309,-10 0/0:61.3744:18:18:678:0:0:0,-5.41854,-10 0/0:64.3847:19:19:711:0:0:0,-5.71957,-10 0/0:61.3744:18:18:643:0:0:0,-5.41854,-10 0/0:46.3229:13:13:464:0:0:0,-3.91339,-10 0/0:52.3435:15:15:567:0:0:0,-4.51545,-10 0/0:25.2508:6:6:228:0:0:0,-1.80618,-10 1/1:28.3127:14:0:0:14:519:-10,-4.21442,0 1/1:31.323:15:0:0:15:563:-10,-4.51545,0 0/0:25.2508:6:6:203:0:0:0,-1.80618,-10 0/0:52.3435:15:15:567:0:0:0,-4.51545,-10 0/0:70.4053:21:21:756:0:0:0,-6.32163,-10 0/0:58.3641:17:17:642:0:0:0,-5.11751,-10 scaffold_6 2471338 . G A 713.225 . AB=0.213115;ABP=133.833;AC=5;AF=0.0271739;AN=184;AO=44;CIGAR=1X;DP=3670;DPB=3670;DPRA=1.12032;EPP=12.6832;EPPR=3.14516;GTI=1;LEN=1;MEANALT=1;MQM=34.9318;MQMR=36.4999;NS=92;NUMALT=1;ODDS=4.56476;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1600;QR=131153;RO=3623;RPP=98.5551;RPPR=7870.25;RUN=1;SAF=15;SAP=12.6832;SAR=29;SRF=1819;SRP=3.14516;SRR=1804;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:88.1252:4:4:148:0:0:0,-1.20412,-10 0/0:99:46:46:1613:0:0:0,-10,-10 0/0:99:23:23:791:0:0:0,-6.92369,-10 0/0:99:22:22:817:0:0:0,-6.62266,-10 0/0:99:8:8:304:0:0:0,-2.40824,-10 0/0:99:77:77:2789:0:0:0,-10,-10 0/0:99:35:35:1279:0:0:0,-10,-10 0/0:99:21:21:744:0:0:0,-6.32163,-10 0/0:97.1436:7:7:239:0:0:0,-2.10721,-10 0/1:58.0003:9:5:187:4:148:-10,0,-10 0/0:99:19:19:718:0:0:0,-5.71957,-10 0/0:0.0449817:45:41:1524:4:143:-4.85432,0,-10 0/1:99:70:56:2010:14:528:-10,0,-10 0/0:99:46:45:1612:0:0:0,-10,-10 0/0:99:46:46:1664:0:0:0,-10,-10 0/0:99:41:41:1480:0:0:0,-10,-10 0/0:99:12:12:449:0:0:0,-3.61236,-10 0/0:99:58:58:2121:0:0:0,-10,-10 0/0:99:82:82:2987:0:0:0,-10,-10 0/0:99:26:26:955:0:0:0,-7.82678,-10 0/0:99:63:63:2309:0:0:0,-10,-10 0/1:99:18:11:380:7:260:-10,0,-10 0/0:99:39:39:1419:0:0:0,-10,-10 0/0:99:47:47:1692:0:0:0,-10,-10 0/0:99:66:66:2314:0:0:0,-10,-10 0/0:99:36:36:1286:0:0:0,-10,-10 0/0:99:26:26:936:0:0:0,-7.82678,-10 0/0:99:41:41:1510:0:0:0,-10,-10 0/0:99:90:90:3295:0:0:0,-10,-10 0/0:99:10:10:370:0:0:0,-3.0103,-10 0/0:99:32:32:1201:0:0:0,-9.63296,-10 0/0:99:31:31:1098:0:0:0,-9.33193,-10 0/0:99:20:20:743:0:0:0,-6.0206,-10 0/0:99:36:36:1294:0:0:0,-10,-10 0/0:99:16:16:555:0:0:0,-4.81648,-10 0/0:99:21:21:727:0:0:0,-6.32163,-10 0/0:99:64:64:2276:0:0:0,-10,-10 0/0:99:42:41:1401:0:0:0,-10,-10 0/0:99:34:34:1281:0:0:0,-10,-10 0/0:99:50:50:1834:0:0:0,-10,-10 0/0:99:62:62:2317:0:0:0,-10,-10 0/0:99:34:34:1227:0:0:0,-10,-10 0/0:99:96:96:3507:0:0:0,-10,-10 0/0:99:52:52:1869:0:0:0,-10,-10 0/0:99:33:33:1154:0:0:0,-9.93399,-10 0/0:99:93:93:3440:0:0:0,-10,-10 0/1:39.5478:58:52:1867:6:228:-10,0,-10 0/0:99:26:26:955:0:0:0,-7.82678,-10 0/0:99:73:73:2547:0:0:0,-10,-10 0/0:99:16:16:588:0:0:0,-4.81648,-10 0/0:99:87:87:3151:0:0:0,-10,-10 0/0:99:32:32:1114:0:0:0,-9.63296,-10 0/0:99:15:15:555:0:0:0,-4.51545,-10 0/0:99:69:69:2530:0:0:0,-10,-10 0/0:99:26:26:893:0:0:0,-7.82678,-10 0/0:99:50:50:1823:0:0:0,-10,-10 0/0:99:11:11:407:0:0:0,-3.31133,-10 0/0:99:34:34:1267:0:0:0,-10,-10 0/0:99:15:15:509:0:0:0,-4.51545,-10 0/0:99:71:71:2594:0:0:0,-10,-10 0/0:99:43:43:1555:0:0:0,-10,-10 0/0:99:82:81:2964:1:13:0,-10,-10 0/0:99:35:35:1261:0:0:0,-10,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:99:62:62:2299:0:0:0,-10,-10 0/0:99:35:35:1189:0:0:0,-10,-10 0/0:99:24:24:859:0:0:0,-7.22472,-10 0/0:99:93:93:3357:0:0:0,-10,-10 0/0:99:26:26:942:0:0:0,-7.82678,-10 0/0:99:39:39:1409:0:0:0,-10,-10 0/0:99:46:46:1679:0:0:0,-10,-10 0/0:99:64:63:2291:0:0:0,-10,-10 0/0:99:47:47:1724:0:0:0,-10,-10 0/0:99:59:59:2095:0:0:0,-10,-10 0/0:99:32:32:1182:0:0:0,-9.63296,-10 0/0:99:25:25:870:0:0:0,-7.52575,-10 0/0:99:27:27:966:0:0:0,-8.12781,-10 0/0:99:16:16:602:0:0:0,-4.81648,-10 0/0:99:21:21:707:0:0:0,-6.32163,-10 0/0:99:63:63:2296:0:0:0,-10,-10 0/0:99:61:61:2213:0:0:0,-10,-10 0/0:99:40:40:1459:0:0:0,-10,-10 0/0:99:45:45:1604:0:0:0,-10,-10 0/0:99:39:39:1434:0:0:0,-10,-10 0/0:99:8:8:301:0:0:0,-2.40824,-10 0/1:99:28:20:698:8:280:-10,0,-10 0/0:99:35:35:1308:0:0:0,-10,-10 0/0:99:11:11:399:0:0:0,-3.31133,-10 0/0:99:22:22:804:0:0:0,-6.62266,-10 0/0:99:23:23:839:0:0:0,-6.92369,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 scaffold_6 2471370 . C T 249.797 . AB=0.186047;ABP=76.6384;AC=2;AF=0.0108696;AN=184;AO=16;CIGAR=1X;DP=3721;DPB=3721;DPRA=1.06465;EPP=3.0103;EPPR=5.48654;GTI=0;LEN=1;MEANALT=1;MQM=34.9375;MQMR=36.753;NS=92;NUMALT=1;ODDS=22.6122;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=579;QR=135102;RO=3705;RPP=37.7539;RPPR=7569.26;RUN=1;SAF=8;SAP=3.0103;SAR=8;SRF=1829;SRP=4.30498;SRR=1876;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:98.1949:5:5:189:0:0:0,-1.50515,-10 0/0:99:46:46:1655:0:0:0,-10,-10 0/0:99:23:23:771:0:0:0,-6.92369,-10 0/0:99:22:22:805:0:0:0,-6.62266,-10 0/0:99:8:8:303:0:0:0,-2.40824,-10 0/0:99:78:78:2839:0:0:0,-10,-10 0/0:99:36:36:1324:0:0:0,-10,-10 0/0:99:21:21:756:0:0:0,-6.32163,-10 0/0:99:7:7:264:0:0:0,-2.10721,-10 0/0:99:10:10:369:0:0:0,-3.0103,-10 0/0:99:20:20:757:0:0:0,-6.0206,-10 0/1:99:45:36:1324:9:313:-10,0,-10 0/0:99:71:71:2551:0:0:0,-10,-10 0/0:99:46:46:1642:0:0:0,-10,-10 0/0:99:46:46:1651:0:0:0,-10,-10 0/1:99:41:34:1269:7:266:-10,0,-10 0/0:99:13:13:438:0:0:0,-3.91339,-10 0/0:99:59:59:2174:0:0:0,-10,-10 0/0:99:83:83:3038:0:0:0,-10,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:99:65:65:2398:0:0:0,-10,-10 0/0:99:18:18:672:0:0:0,-5.41854,-10 0/0:99:40:40:1503:0:0:0,-10,-10 0/0:99:49:49:1784:0:0:0,-10,-10 0/0:99:67:67:2444:0:0:0,-10,-10 0/0:99:36:36:1322:0:0:0,-10,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:99:41:41:1528:0:0:0,-10,-10 0/0:99:91:91:3332:0:0:0,-10,-10 0/0:99:10:10:380:0:0:0,-3.0103,-10 0/0:99:32:32:1188:0:0:0,-9.63296,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:99:20:20:735:0:0:0,-6.0206,-10 0/0:99:36:36:1344:0:0:0,-10,-10 0/0:99:16:16:582:0:0:0,-4.81648,-10 0/0:99:21:21:779:0:0:0,-6.32163,-10 0/0:99:65:65:2336:0:0:0,-10,-10 0/0:99:43:43:1523:0:0:0,-10,-10 0/0:99:35:35:1319:0:0:0,-10,-10 0/0:99:50:50:1816:0:0:0,-10,-10 0/0:99:62:62:2266:0:0:0,-10,-10 0/0:99:35:35:1292:0:0:0,-10,-10 0/0:99:98:98:3637:0:0:0,-10,-10 0/0:99:52:52:1937:0:0:0,-10,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:99:94:94:3447:0:0:0,-10,-10 0/0:99:58:58:2126:0:0:0,-10,-10 0/0:99:27:27:1011:0:0:0,-8.12781,-10 0/0:99:75:75:2667:0:0:0,-10,-10 0/0:99:16:16:603:0:0:0,-4.81648,-10 0/0:99:88:88:3134:0:0:0,-10,-10 0/0:99:33:33:1187:0:0:0,-9.93399,-10 0/0:99:15:15:564:0:0:0,-4.51545,-10 0/0:99:70:70:2570:0:0:0,-10,-10 0/0:99:26:26:950:0:0:0,-7.82678,-10 0/0:99:51:51:1823:0:0:0,-10,-10 0/0:99:11:11:406:0:0:0,-3.31133,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:99:15:15:561:0:0:0,-4.51545,-10 0/0:99:71:71:2619:0:0:0,-10,-10 0/0:99:45:45:1633:0:0:0,-10,-10 0/0:99:82:82:2963:0:0:0,-10,-10 0/0:99:37:37:1317:0:0:0,-10,-10 0/0:99:29:29:1024:0:0:0,-8.72987,-10 0/0:99:62:62:2271:0:0:0,-10,-10 0/0:99:35:35:1199:0:0:0,-10,-10 0/0:99:25:25:887:0:0:0,-7.52575,-10 0/0:99:93:93:3289:0:0:0,-10,-10 0/0:99:28:28:1041:0:0:0,-8.42884,-10 0/0:99:40:40:1409:0:0:0,-10,-10 0/0:99:46:46:1712:0:0:0,-10,-10 0/0:99:67:67:2437:0:0:0,-10,-10 0/0:99:47:47:1722:0:0:0,-10,-10 0/0:99:61:61:2236:0:0:0,-10,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:99:27:27:1011:0:0:0,-8.12781,-10 0/0:99:16:16:593:0:0:0,-4.81648,-10 0/0:99:21:21:755:0:0:0,-6.32163,-10 0/0:99:65:65:2412:0:0:0,-10,-10 0/0:99:62:62:2227:0:0:0,-10,-10 0/0:99:40:40:1445:0:0:0,-10,-10 0/0:99:47:47:1707:0:0:0,-10,-10 0/0:99:39:39:1387:0:0:0,-10,-10 0/0:99:8:8:288:0:0:0,-2.40824,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:99:35:35:1307:0:0:0,-10,-10 0/0:99:11:11:392:0:0:0,-3.31133,-10 0/0:99:22:22:824:0:0:0,-6.62266,-10 0/0:99:23:23:821:0:0:0,-6.92369,-10 0/0:99:30:30:1120:0:0:0,-9.0309,-10 scaffold_6 2489333 . G A 1733.01 . AB=0.481752;ABP=3.40655;AC=4;AF=0.0217391;AN=184;AO=67;CIGAR=1X;DP=2355;DPB=2355;DPRA=1.31096;EPP=12.3768;EPPR=4.52881;GTI=1;LEN=1;MEANALT=1;MQM=59.9552;MQMR=59.9707;NS=92;NUMALT=1;ODDS=0.534855;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2392;QR=83441;RO=2288;RPP=148.499;RPPR=4971.34;RUN=1;SAF=42;SAP=12.3768;SAR=25;SRF=1164;SRP=4.52881;SRR=1124;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.3255:19:19:679:0:0:0,-5.71957,-10 0/1:1.99239:9:8:287:1:16:0,-0.155027,-10 0/0:99:34:34:1211:0:0:0,-10,-10 0/0:52.2637:13:13:471:0:0:0,-3.91339,-10 0/0:61.2946:16:16:561:0:0:0,-4.81648,-10 0/0:64.3049:17:17:603:0:0:0,-5.11751,-10 0/0:99:52:52:1887:0:0:0,-10,-10 0/0:99:31:31:1125:0:0:0,-9.33193,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:34.2019:7:7:264:0:0:0,-2.10721,-10 0/0:46.2431:11:11:407:0:0:0,-3.31133,-10 0/0:58.2843:15:15:552:0:0:0,-4.51545,-10 0/0:99:51:51:1866:0:0:0,-10,-10 0/0:99:41:41:1522:0:0:0,-10,-10 0/0:99:43:43:1551:0:0:0,-10,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/0:73.3358:20:20:735:0:0:0,-6.0206,-10 0/0:58.2843:15:15:566:0:0:0,-4.51545,-10 0/0:82.3666:23:23:859:0:0:0,-6.92369,-10 0/1:99:47:25:869:22:799:-10,0,-10 0/0:64.3049:17:17:563:0:0:0,-5.11751,-10 0/1:99:39:18:642:21:774:-10,0,-10 0/0:79.3564:22:22:824:0:0:0,-6.62266,-10 0/0:99:32:32:1139:0:0:0,-9.63296,-10 0/0:61.2946:16:16:601:0:0:0,-4.81648,-10 0/0:70.3255:19:19:710:0:0:0,-5.71957,-10 0/0:88.3869:25:25:925:0:0:0,-7.52575,-10 0/0:73.3358:20:20:722:0:0:0,-6.0206,-10 0/0:94.4064:27:27:998:0:0:0,-8.12781,-10 0/0:99:49:49:1798:0:0:0,-10,-10 0/0:28.1813:5:5:186:0:0:0,-1.50515,-10 0/0:34.2019:7:7:266:0:0:0,-2.10721,-10 0/0:99:31:31:1133:0:0:0,-9.33193,-10 0/0:49.2534:12:12:435:0:0:0,-3.61236,-10 0/0:97.4206:28:28:1020:0:0:0,-8.42884,-10 0/0:34.2019:7:7:243:0:0:0,-2.10721,-10 0/0:64.3049:17:17:638:0:0:0,-5.11751,-10 0/1:99:42:20:750:22:787:-10,0,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:58.2843:15:15:567:0:0:0,-4.51545,-10 0/0:99:36:36:1291:0:0:0,-10,-10 0/0:82.3666:23:23:847:0:0:0,-6.92369,-10 0/0:94.4064:27:27:1000:0:0:0,-8.12781,-10 0/0:99:34:34:1234:0:0:0,-10,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:82.3666:23:23:818:0:0:0,-6.92369,-10 0/0:99:45:45:1617:0:0:0,-10,-10 0/0:99:38:38:1375:0:0:0,-10,-10 0/0:82.3666:23:23:824:0:0:0,-6.92369,-10 0/0:99:36:36:1265:0:0:0,-10,-10 0/0:79.3564:22:22:813:0:0:0,-6.62266,-10 0/0:99:45:45:1636:0:0:0,-10,-10 0/0:34.2019:7:7:231:0:0:0,-2.10721,-10 0/0:49.2534:12:12:442:0:0:0,-3.61236,-10 0/0:99:49:49:1713:0:0:0,-10,-10 0/0:88.3869:25:25:854:0:0:0,-7.52575,-10 0/0:97.4206:28:28:1052:0:0:0,-8.42884,-10 0/0:61.2946:16:16:594:0:0:0,-4.81648,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:58.2843:15:15:533:0:0:0,-4.51545,-10 0/0:99:42:42:1539:0:0:0,-10,-10 0/0:70.3255:19:19:704:0:0:0,-5.71957,-10 0/0:99:45:45:1655:0:0:0,-10,-10 0/0:79.3564:22:22:762:0:0:0,-6.62266,-10 0/0:43.2328:10:10:376:0:0:0,-3.0103,-10 0/0:99:53:53:1940:0:0:0,-10,-10 0/0:67.6141:28:27:1012:1:16:0,-5.38168,-10 0/0:52.2637:13:13:464:0:0:0,-3.91339,-10 0/0:99:51:51:1911:0:0:0,-10,-10 0/0:37.2122:8:8:304:0:0:0,-2.40824,-10 0/0:85.3768:24:24:903:0:0:0,-7.22472,-10 0/0:99:38:38:1387:0:0:0,-10,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:94.4064:27:27:982:0:0:0,-8.12781,-10 0/0:99:38:38:1419:0:0:0,-10,-10 0/0:55.274:14:14:514:0:0:0,-4.21442,-10 0/0:73.3358:20:20:743:0:0:0,-6.0206,-10 0/0:61.2946:16:16:603:0:0:0,-4.81648,-10 0/0:37.2122:8:8:299:0:0:0,-2.40824,-10 0/0:61.2946:16:16:606:0:0:0,-4.81648,-10 0/0:99:42:42:1469:0:0:0,-10,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:76.3461:21:21:791:0:0:0,-6.32163,-10 0/0:82.3666:23:23:839:0:0:0,-6.92369,-10 0/0:99:31:31:1080:0:0:0,-9.33193,-10 0/0:37.2122:8:8:301:0:0:0,-2.40824,-10 0/0:70.3255:19:19:698:0:0:0,-5.71957,-10 0/0:88.3869:25:25:909:0:0:0,-7.52575,-10 0/0:37.2122:8:8:303:0:0:0,-2.40824,-10 0/0:94.4064:27:27:1002:0:0:0,-8.12781,-10 0/0:91.3968:26:26:942:0:0:0,-7.82678,-10 0/0:70.3255:19:19:720:0:0:0,-5.71957,-10 scaffold_6 2645805 . A G 8277.32 . AB=0.714286;ABP=36.513;AC=24;AF=0.130435;AN=184;AO=302;CIGAR=1X;DP=1995;DPB=1995;DPRA=1.27001;EPP=4.0457;EPPR=3.05656;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9988;NS=92;NUMALT=1;ODDS=0.991893;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11050;QR=62243;RO=1690;RPP=658.795;RPPR=3672.8;RUN=1;SAF=145;SAP=4.0457;SAR=157;SRF=842;SRP=3.05656;SRR=848;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:33.9134:14:14:462:0:0:0,-4.21442,-10 0/0:18.8619:9:9:338:0:0:0,-2.70927,-10 0/0:67.0267:25:25:912:0:0:0,-7.52575,-10 0/0:30.9031:13:13:468:0:0:0,-3.91339,-10 0/0:15.8516:8:8:296:0:0:0,-2.40824,-10 0/0:12.8413:7:7:266:0:0:0,-2.10721,-10 0/0:99:37:37:1367:0:0:0,-10,-10 0/0:57.9958:22:22:822:0:0:0,-6.62266,-10 0/0:18.8619:9:9:333:0:0:0,-2.70927,-10 0/0:18.8619:9:9:341:0:0:0,-2.70927,-10 0/0:18.8619:9:9:307:0:0:0,-2.70927,-10 0/0:21.8722:10:10:373:0:0:0,-3.0103,-10 0/0:64.0164:24:24:883:0:0:0,-7.22472,-10 0/0:99:37:37:1393:0:0:0,-10,-10 0/0:64.0164:24:24:890:0:0:0,-7.22472,-10 0/0:67.0267:25:25:934:0:0:0,-7.52575,-10 0/0:99:37:37:1399:0:0:0,-10,-10 0/0:48.9649:19:19:652:0:0:0,-5.71957,-10 0/0:76.0575:28:28:1001:0:0:0,-8.42884,-10 0/0:99:49:49:1841:0:0:0,-10,-10 0/0:57.9958:22:22:827:0:0:0,-6.62266,-10 0/0:88.0983:32:32:1179:0:0:0,-9.63296,-10 0/0:9.83098:6:6:224:0:0:0,-1.80618,-10 0/0:67.0267:25:25:887:0:0:0,-7.52575,-10 0/0:70.037:26:26:966:0:0:0,-7.82678,-10 0/0:79.0678:29:29:1093:0:0:0,-8.72987,-10 0/0:76.0575:28:28:1031:0:0:0,-8.42884,-10 0/0:12.8413:7:7:262:0:0:0,-2.10721,-10 0/0:79.0678:29:29:1063:0:0:0,-8.72987,-10 0/0:97.1257:35:35:1306:0:0:0,-10,-10 0/1:0.280204:4:4:143:0:0:0,-1.20412,-10 0/0:15.8516:8:8:291:0:0:0,-2.40824,-10 0/0:57.9958:22:22:808:0:0:0,-6.62266,-10 0/0:15.8516:8:8:271:0:0:0,-2.40824,-10 0/0:91.1094:33:33:1209:0:0:0,-9.93399,-10 0/0:18.8619:9:9:312:0:0:0,-2.70927,-10 0/0:18.8619:9:9:323:0:0:0,-2.70927,-10 0/0:91.1094:33:33:1190:0:0:0,-9.93399,-10 0/0:67.0267:25:25:939:0:0:0,-7.52575,-10 0/0:42.9443:17:17:637:0:0:0,-5.11751,-10 0/0:99:43:42:1571:0:0:0,-10,-10 0/0:42.9443:17:17:634:0:0:0,-5.11751,-10 0/0:51.9752:20:20:749:0:0:0,-6.0206,-10 0/0:64.0164:25:24:883:0:0:0,-7.22472,-10 0/0:21.0213:26:25:936:1:38:0,-2.61181,-10 0/0:42.9443:17:17:642:0:0:0,-5.11751,-10 0/0:99:50:50:1866:0:0:0,-10,-10 0/0:51.9752:20:20:713:0:0:0,-6.0206,-10 0/0:54.9855:21:21:765:0:0:0,-6.32163,-10 0/0:99:42:42:1560:0:0:0,-10,-10 0/0:24.8825:11:11:414:0:0:0,-3.31133,-10 0/0:82.0782:30:30:1075:0:0:0,-9.0309,-10 0/0:33.9134:14:14:500:0:0:0,-4.21442,-10 0/0:21.8722:10:10:377:0:0:0,-3.0103,-10 0/0:99:44:43:1564:0:0:0,-10,-10 0/0:36.9237:15:15:526:0:0:0,-4.51545,-10 0/0:51.9752:20:20:745:0:0:0,-6.0206,-10 0/1:0.137843:3:3:110:0:0:0,-0.90309,-10 0/0:33.9134:14:14:504:0:0:0,-4.21442,-10 0/0:21.8722:10:10:358:0:0:0,-3.0103,-10 0/1:99:43:10:356:33:1200:-10,0,-10 0/0:36.9237:15:15:566:0:0:0,-4.51545,-10 0/0:99:37:37:1380:0:0:0,-10,-10 1/1:27.3608:19:0:0:19:718:-10,-5.71957,0 0/0:33.9134:14:14:506:0:0:0,-4.21442,-10 0/0:79.0678:29:29:1080:0:0:0,-8.72987,-10 0/0:33.9134:14:14:516:0:0:0,-4.21442,-10 1/1:27.3608:19:0:0:19:703:-10,-5.71957,0 0/1:99:41:14:524:27:952:-10,0,-10 1/1:12.3093:14:0:0:14:527:-10,-4.21442,0 1/1:18.3299:16:0:0:16:566:-10,-4.81648,0 1/1:75.5256:35:0:0:35:1278:-10,-10,0 1/1:66.4947:32:0:0:32:1193:-10,-9.63296,0 1/1:51.4432:27:0:0:27:1007:-10,-8.12781,0 1/1:99:45:0:0:45:1605:-10,-10,0 1/1:15.3196:15:0:0:15:568:-10,-4.51545,0 0/0:27.8928:12:12:450:0:0:0,-3.61236,-10 0/0:33.9134:14:14:502:0:0:0,-4.21442,-10 0/0:9.83098:6:6:221:0:0:0,-1.80618,-10 0/0:39.934:16:16:604:0:0:0,-4.81648,-10 0/0:85.0882:31:31:1129:0:0:0,-9.33193,-10 0/0:99:40:40:1453:0:0:0,-10,-10 0/0:88.0983:32:32:1207:0:0:0,-9.63296,-10 0/0:51.9752:20:20:758:0:0:0,-6.0206,-10 1/1:27.3608:19:0:0:19:695:-10,-5.71957,0 0/0:21.8722:10:10:360:0:0:0,-3.0103,-10 0/0:51.9752:20:20:733:0:0:0,-6.0206,-10 0/0:33.9134:14:14:496:0:0:0,-4.21442,-10 0/0:21.8722:10:10:380:0:0:0,-3.0103,-10 0/0:39.934:16:16:578:0:0:0,-4.81648,-10 0/0:57.9958:22:22:816:0:0:0,-6.62266,-10 0/0:64.0164:24:24:897:0:0:0,-7.22472,-10 scaffold_6 2705104 . T A 791.875 . AB=0.777778;ABP=33.1696;AC=3;AF=0.0163043;AN=184;AO=36;CIGAR=1X;DP=2188;DPB=2188;DPRA=0.791667;EPP=27.1378;EPPR=4.96746;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.966;NS=92;NUMALT=1;ODDS=5.76531;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1310;QR=79099;RO=2148;RPP=81.1833;RPPR=4667.33;RUN=1;SAF=8;SAP=27.1378;SAR=28;SRF=1096;SRP=4.96746;SRR=1052;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:71.0497:14:14:528:0:0:0,-4.21442,-10 0/0:52.9879:8:8:304:0:0:0,-2.40824,-10 0/0:83.091:18:18:643:0:0:0,-5.41854,-10 0/0:95.1299:22:22:795:0:0:0,-6.62266,-10 0/1:99:17:10:362:7:259:-10,0,-10 0/0:68.0394:13:13:484:0:0:0,-3.91339,-10 0/0:99:48:48:1798:0:0:0,-10,-10 0/0:99:42:42:1548:0:0:0,-10,-10 0/0:74.06:15:15:519:0:0:0,-4.51545,-10 0/0:59.0085:10:10:370:0:0:0,-3.0103,-10 0/0:52.9879:8:8:279:0:0:0,-2.40824,-10 0/0:59.0085:10:10:373:0:0:0,-3.0103,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:99:43:43:1620:0:0:0,-10,-10 0/0:99:27:26:937:0:0:0,-7.82678,-10 0/0:99:36:36:1342:0:0:0,-10,-10 0/1:0.000847994:12:0:0:12:439:-10,-3.61236,0 0/0:98.1379:23:23:825:0:0:0,-6.92369,-10 0/0:99:39:39:1420:0:0:0,-10,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:99:42:42:1549:0:0:0,-10,-10 0/0:74.06:15:15:566:0:0:0,-4.51545,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:99:30:30:1062:0:0:0,-9.0309,-10 0/0:95.1299:22:22:809:0:0:0,-6.62266,-10 0/0:99:24:24:872:0:0:0,-7.22472,-10 0/0:68.0394:13:13:454:0:0:0,-3.91339,-10 0/0:99:24:24:856:0:0:0,-7.22472,-10 0/0:99:30:30:1117:0:0:0,-9.0309,-10 0/0:83.091:18:18:664:0:0:0,-5.41854,-10 0/0:68.0394:13:13:483:0:0:0,-3.91339,-10 0/0:99:26:26:963:0:0:0,-7.82678,-10 0/0:59.0085:10:10:355:0:0:0,-3.0103,-10 0/0:92.1207:21:21:788:0:0:0,-6.32163,-10 0/0:59.0085:10:10:368:0:0:0,-3.0103,-10 0/0:77.0703:16:16:578:0:0:0,-4.81648,-10 0/0:99:37:37:1383:0:0:0,-10,-10 0/0:86.1013:19:19:694:0:0:0,-5.71957,-10 0/0:89.1109:20:20:743:0:0:0,-6.0206,-10 0/0:99:48:48:1766:0:0:0,-10,-10 0/0:86.1013:19:19:709:0:0:0,-5.71957,-10 0/0:95.1299:22:22:790:0:0:0,-6.62266,-10 0/0:99:43:43:1606:0:0:0,-10,-10 0/0:99:26:26:952:0:0:0,-7.82678,-10 0/0:86.1013:19:19:675:0:0:0,-5.71957,-10 0/0:99:48:48:1761:0:0:0,-10,-10 0/0:99:33:33:1241:0:0:0,-9.93399,-10 0/0:92.1207:21:21:794:0:0:0,-6.32163,-10 0/0:99:31:31:1172:0:0:0,-9.33193,-10 0/0:89.1109:20:20:750:0:0:0,-6.0206,-10 0/0:99:36:36:1331:0:0:0,-10,-10 0/0:68.0394:13:13:455:0:0:0,-3.91339,-10 0/0:68.0394:13:13:463:0:0:0,-3.91339,-10 0/0:99:38:38:1436:0:0:0,-10,-10 0/0:62.0188:11:11:405:0:0:0,-3.31133,-10 0/0:99:34:34:1218:0:0:0,-10,-10 0/0:92.1207:21:21:782:0:0:0,-6.32163,-10 0/0:89.1109:20:20:756:0:0:0,-6.0206,-10 0/0:65.0291:12:12:450:0:0:0,-3.61236,-10 0/0:99:42:42:1554:0:0:0,-10,-10 0/0:83.091:18:18:676:0:0:0,-5.41854,-10 0/0:99:41:41:1497:0:0:0,-10,-10 0/0:99:25:25:922:0:0:0,-7.52575,-10 0/0:46.9673:6:6:228:0:0:0,-1.80618,-10 0/0:99:41:41:1519:0:0:0,-10,-10 0/0:99:31:31:1091:0:0:0,-9.33193,-10 0/0:62.0188:11:11:395:0:0:0,-3.31133,-10 0/0:74.9573:31:30:1124:1:38:0,-4.04057,-10 0/0:92.1207:21:21:774:0:0:0,-6.32163,-10 0/0:71.0497:14:14:505:0:0:0,-4.21442,-10 0/0:92.1207:21:21:797:0:0:0,-6.32163,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:77.0703:16:16:594:0:0:0,-4.81648,-10 0/0:99:26:26:969:0:0:0,-7.82678,-10 0/0:83.091:19:18:649:0:0:0,-5.41854,-10 0/0:92.1207:21:21:767:0:0:0,-6.32163,-10 0/0:89.1109:20:20:747:0:0:0,-6.0206,-10 0/0:59.0085:10:10:357:0:0:0,-3.0103,-10 0/0:65.0291:12:12:453:0:0:0,-3.61236,-10 0/0:99:33:32:1208:0:0:0,-9.63296,-10 0/0:99:37:37:1383:0:0:0,-10,-10 0/0:89.1109:20:20:712:0:0:0,-6.0206,-10 0/0:86.1013:19:19:719:0:0:0,-5.71957,-10 0/0:99:34:33:1199:0:0:0,-9.93399,-10 0/1:0.0135878:16:0:0:16:574:-10,-4.81648,0 0/0:95.1299:22:22:818:0:0:0,-6.62266,-10 0/0:99:24:24:899:0:0:0,-7.22472,-10 0/0:46.9673:6:6:205:0:0:0,-1.80618,-10 0/0:98.1379:23:23:814:0:0:0,-6.92369,-10 0/0:99:24:24:861:0:0:0,-7.22472,-10 0/0:99:28:28:1023:0:0:0,-8.42884,-10 scaffold_6 2723585 . T C 54.9046 . AB=0.333333;ABP=5.9056;AC=1;AF=0.00549451;AN=182;AO=4;CIGAR=1X;DP=1220;DPB=1220;DPRA=0.89404;EPP=5.18177;EPPR=3.79846;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9794;NS=91;NUMALT=1;ODDS=11.2422;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=44236;RO=1215;RPP=11.6962;RPPR=2641.35;RUN=1;SAF=1;SAP=5.18177;SAR=3;SRF=618;SRP=3.79846;SRR=597;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:84.9481:14:14:505:0:0:0,-4.21442,-10 0/0:66.8863:8:8:291:0:0:0,-2.40824,-10 0/0:93.9789:17:17:627:0:0:0,-5.11751,-10 0/0:81.9378:13:13:483:0:0:0,-3.91339,-10 0/0:78.9275:12:12:455:0:0:0,-3.61236,-10 0/0:72.9069:10:10:376:0:0:0,-3.0103,-10 0/0:99:22:22:779:0:0:0,-6.62266,-10 0/0:93.9789:17:17:614:0:0:0,-5.11751,-10 0/0:66.8863:8:8:299:0:0:0,-2.40824,-10 0/0:48.8245:2:2:76:0:0:0,-0.60206,-7.22 0/0:60.8657:6:6:212:0:0:0,-1.80618,-10 0/0:63.876:7:7:250:0:0:0,-2.10721,-10 0/0:99:20:20:750:0:0:0,-6.0206,-10 0/0:99:27:27:925:0:0:0,-8.12781,-10 0/0:87.9584:15:15:525:0:0:0,-4.51545,-10 0/0:84.9481:14:14:507:0:0:0,-4.21442,-10 0/0:90.9687:16:16:592:0:0:0,-4.81648,-10 0/0:66.8863:8:8:304:0:0:0,-2.40824,-10 0/0:81.9378:13:13:484:0:0:0,-3.91339,-10 0/0:99:22:22:821:0:0:0,-6.62266,-10 0/0:78.9275:12:12:398:0:0:0,-3.61236,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:60.8657:6:6:213:0:0:0,-1.80618,-10 0/0:81.9378:13:13:451:0:0:0,-3.91339,-10 0/0:60.8657:6:6:212:0:0:0,-1.80618,-10 0/0:96.9867:18:18:668:0:0:0,-5.41854,-10 0/0:54.8451:4:4:141:0:0:0,-1.20412,-10 0/0:78.9275:12:12:447:0:0:0,-3.61236,-10 0/0:90.9687:16:16:571:0:0:0,-4.81648,-10 0/0:99:22:22:813:0:0:0,-6.62266,-10 0/0:66.8863:8:8:303:0:0:0,-2.40824,-10 0/0:63.876:7:7:262:0:0:0,-2.10721,-10 0/0:81.9378:13:13:469:0:0:0,-3.91339,-10 0/0:66.8863:8:8:304:0:0:0,-2.40824,-10 0/0:63.876:7:7:263:0:0:0,-2.10721,-10 0/0:63.876:7:7:261:0:0:0,-2.10721,-10 0/0:84.9481:14:14:506:0:0:0,-4.21442,-10 0/0:93.9789:18:17:581:0:0:0,-5.11751,-10 0/0:69.8966:9:9:335:0:0:0,-2.70927,-10 0/0:78.9275:12:12:448:0:0:0,-3.61236,-10 0/0:87.9584:15:15:549:0:0:0,-4.51545,-10 0/0:66.8863:8:8:304:0:0:0,-2.40824,-10 0/0:60.8657:6:6:203:0:0:0,-1.80618,-10 0/0:99:19:19:698:0:0:0,-5.71957,-10 0/0:66.8863:8:8:279:0:0:0,-2.40824,-10 0/0:99:19:19:702:0:0:0,-5.71957,-10 0/0:99:36:36:1353:0:0:0,-10,-10 0/0:90.9687:16:16:604:0:0:0,-4.81648,-10 0/0:75.9172:11:11:400:0:0:0,-3.31133,-10 0/0:99:30:30:1058:0:0:0,-9.0309,-10 0/0:72.9069:10:10:378:0:0:0,-3.0103,-10 0/0:99:24:24:805:0:0:0,-7.22472,-10 0/0:72.9069:10:10:352:0:0:0,-3.0103,-10 .:.:.:.:.:.:.:. 0/0:93.9789:17:17:639:0:0:0,-5.11751,-10 0/0:78.9275:12:12:455:0:0:0,-3.61236,-10 0/0:78.9275:12:12:445:0:0:0,-3.61236,-10 0/0:66.8863:8:8:280:0:0:0,-2.40824,-10 0/0:78.9275:12:12:420:0:0:0,-3.61236,-10 0/0:66.8863:8:8:279:0:0:0,-2.40824,-10 0/0:90.9687:16:16:526:0:0:0,-4.81648,-10 0/0:87.9584:15:15:548:0:0:0,-4.51545,-10 0/0:99:19:19:715:0:0:0,-5.71957,-10 0/0:81.9378:13:13:449:0:0:0,-3.91339,-10 0/0:75.9172:11:11:363:0:0:0,-3.31133,-10 0/0:99:20:20:743:0:0:0,-6.0206,-10 0/0:81.9378:13:13:483:0:0:0,-3.91339,-10 0/0:57.8554:5:5:187:0:0:0,-1.50515,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:66.8863:8:8:302:0:0:0,-2.40824,-10 0/0:93.9789:17:17:636:0:0:0,-5.11751,-10 0/0:87.9584:15:15:556:0:0:0,-4.51545,-10 0/1:54.9046:12:8:303:4:152:-10,0,-10 0/0:84.9481:14:14:532:0:0:0,-4.21442,-10 0/0:93.9789:17:17:626:0:0:0,-5.11751,-10 0/0:51.8348:3:3:101:0:0:0,-0.90309,-9.42667 0/0:72.9069:10:10:335:0:0:0,-3.0103,-10 0/0:81.9378:13:13:494:0:0:0,-3.91339,-10 0/0:48.8245:2:2:76:0:0:0,-0.60206,-7.22 0/0:75.9172:11:11:413:0:0:0,-3.31133,-10 0/0:99:28:28:1060:0:0:0,-8.42884,-10 0/0:93.9789:17:17:629:0:0:0,-5.11751,-10 0/0:84.9481:14:14:531:0:0:0,-4.21442,-10 0/0:87.9584:15:15:548:0:0:0,-4.51545,-10 0/0:78.9275:12:12:434:0:0:0,-3.61236,-10 0/0:54.8451:4:4:151:0:0:0,-1.20412,-10 0/0:75.9172:11:11:405:0:0:0,-3.31133,-10 0/0:78.9275:12:12:411:0:0:0,-3.61236,-10 0/0:63.876:7:7:206:0:0:0,-2.10721,-10 0/0:99:20:20:734:0:0:0,-6.0206,-10 0/0:90.9687:16:16:593:0:0:0,-4.81648,-10 0/0:78.9275:12:12:429:0:0:0,-3.61236,-10 scaffold_6 2783862 . A G 47813.1 . AB=0.482759;ABP=3.08518;AC=183;AF=0.994565;AN=184;AO=1619;CIGAR=1X;DP=1635;DPB=1635;DPRA=0;EPP=3372.51;EPPR=37.7539;GTI=0;LEN=1;MEANALT=1;MQM=59.8573;MQMR=60;NS=92;NUMALT=1;ODDS=5.76845;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57885;QR=573;RO=16;RPP=3.01164;RPPR=3.0103;RUN=1;SAF=823;SAP=3.98807;SAR=796;SRF=8;SRP=3.0103;SRR=8;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:64.2181:15:0:0:15:510:-10,-4.51545,0 1/1:49.1666:10:0:0:10:371:-10,-3.0103,0 1/1:70.2387:17:0:0:17:594:-10,-5.11751,0 1/1:73.249:18:0:0:18:673:-10,-5.41854,0 1/1:37.1254:6:0:0:6:225:-10,-1.80618,0 1/1:49.1666:10:0:0:10:368:-10,-3.0103,0 1/1:99:35:0:0:35:1278:-10,-10,0 1/1:64.2181:15:0:0:15:544:-10,-4.51545,0 1/1:49.1666:10:0:0:10:371:-10,-3.0103,0 1/1:28.0945:3:0:0:3:100:-9.33333,-0.90309,0 1/1:37.1254:6:0:0:6:206:-10,-1.80618,0 1/1:31.1048:4:0:0:4:149:-10,-1.20412,0 1/1:94.3185:25:0:0:25:884:-10,-7.52575,0 1/1:99:30:0:0:30:1042:-10,-9.0309,0 1/1:76.2592:19:0:0:19:687:-10,-5.71957,0 1/1:58.1975:13:0:0:13:461:-10,-3.91339,0 1/1:79.2696:20:0:0:20:729:-10,-6.0206,0 1/1:58.1975:13:0:0:13:446:-10,-3.91339,0 1/1:67.2284:16:0:0:16:537:-10,-4.81648,0 1/1:99:42:0:0:42:1460:-10,-10,0 1/1:79.2696:20:0:0:20:701:-10,-6.0206,0 1/1:99:29:0:0:29:1007:-10,-8.72987,0 1/1:55.1872:12:0:0:12:407:-10,-3.61236,0 1/1:85.2902:22:0:0:22:810:-10,-6.62266,0 1/1:73.249:18:0:0:18:641:-10,-5.41854,0 1/1:79.2696:20:0:0:20:703:-10,-6.0206,0 1/1:94.3185:25:0:0:25:938:-10,-7.52575,0 1/1:49.1666:10:0:0:10:355:-10,-3.0103,0 1/1:67.2284:16:0:0:16:606:-10,-4.81648,0 1/1:99:35:0:0:35:1241:-10,-10,0 1/1:34.1151:5:0:0:5:166:-10,-1.50515,0 1/1:64.2181:15:0:0:15:514:-10,-4.51545,0 1/1:73.249:18:0:0:18:553:-10,-5.41854,0 1/1:58.1975:13:0:0:13:471:-10,-3.91339,0 1/1:76.2592:19:0:0:19:708:-10,-5.71957,0 1/1:43.146:8:0:0:8:244:-10,-2.40824,0 1/1:49.1666:10:0:0:10:373:-10,-3.0103,0 1/1:99:27:0:0:27:937:-10,-8.12781,0 1/1:67.2284:16:0:0:16:580:-10,-4.81648,0 1/1:61.2078:14:0:0:14:518:-10,-4.21442,0 1/1:99:30:0:0:30:1098:-10,-9.0309,0 1/1:70.2387:17:0:0:17:606:-10,-5.11751,0 1/1:73.249:18:0:0:18:659:-10,-5.41854,0 1/1:99:38:0:0:38:1338:-10,-10,0 1/1:88.2998:23:0:0:23:871:-10,-6.92369,0 1/1:64.2181:15:0:0:15:470:-10,-4.51545,0 1/1:99:45:0:0:45:1629:-10,-10,0 1/1:99:29:0:0:29:1070:-10,-8.72987,0 1/1:55.1872:12:0:0:12:422:-10,-3.61236,0 1/1:99:37:0:0:37:1253:-10,-10,0 1/1:52.1769:11:0:0:11:401:-10,-3.31133,0 1/1:99:30:0:0:30:1076:-10,-9.0309,0 1/1:67.2284:16:0:0:16:584:-10,-4.81648,0 1/1:37.1254:6:0:0:6:218:-10,-1.80618,0 1/1:99:30:0:0:30:1086:-10,-9.0309,0 1/1:40.1357:7:0:0:7:251:-10,-2.10721,0 1/1:85.2902:22:0:0:22:800:-10,-6.62266,0 1/1:52.1769:11:0:0:11:411:-10,-3.31133,0 1/1:64.2181:15:0:0:15:566:-10,-4.51545,0 1/1:55.1872:12:0:0:12:426:-10,-3.61236,0 1/1:99:36:0:0:36:1259:-10,-10,0 1/1:43.146:8:0:0:8:288:-10,-2.40824,0 1/1:79.2696:20:0:0:20:717:-10,-6.0206,0 1/1:67.2284:16:0:0:16:599:-10,-4.81648,0 1/1:46.1563:9:0:0:9:338:-10,-2.70927,0 0/1:99:29:15:535:14:493:-10,0,-10 1/1:64.2181:15:0:0:15:520:-10,-4.51545,0 1/1:49.1666:10:0:0:10:360:-10,-3.0103,0 1/1:85.1088:39:1:38:38:1362:-10,-6.34911,0 1/1:49.1666:10:0:0:10:371:-10,-3.0103,0 1/1:73.249:18:0:0:18:632:-10,-5.41854,0 1/1:88.2998:23:0:0:23:807:-10,-6.92369,0 1/1:97.3262:26:0:0:26:935:-10,-7.82678,0 1/1:52.1769:11:0:0:11:399:-10,-3.31133,0 1/1:99:31:0:0:31:1114:-10,-9.33193,0 1/1:52.1769:11:0:0:11:401:-10,-3.31133,0 1/1:49.1666:10:0:0:10:376:-10,-3.0103,0 1/1:40.1357:7:0:0:7:232:-10,-2.10721,0 1/1:34.1151:5:0:0:5:179:-10,-1.50515,0 1/1:70.2387:17:0:0:17:582:-10,-5.11751,0 1/1:82.2799:21:0:0:21:768:-10,-6.32163,0 1/1:79.2696:20:0:0:20:741:-10,-6.0206,0 1/1:46.1563:9:0:0:9:318:-10,-2.70927,0 1/1:85.2902:22:0:0:22:788:-10,-6.62266,0 1/1:64.2181:15:0:0:15:559:-10,-4.51545,0 1/1:25.0842:2:0:0:2:73:-6.935,-0.60206,0 1/1:55.1872:12:0:0:12:438:-10,-3.61236,0 1/1:61.2078:14:0:0:14:478:-10,-4.21442,0 1/1:40.1357:7:0:0:7:263:-10,-2.10721,0 1/1:70.2387:17:0:0:17:628:-10,-5.11751,0 1/1:85.2902:22:0:0:22:780:-10,-6.62266,0 1/1:79.2696:20:0:0:20:744:-10,-6.0206,0 scaffold_6 2789561 . A G 16444.4 . AB=0.575342;ABP=10.2089;AC=51;AF=0.277174;AN=184;AO=587;CIGAR=1X;DP=2179;DPB=2179;DPRA=0.92355;EPP=9.85025;EPPR=3.05947;GTI=4;LEN=1;MEANALT=1.03333;MQM=59.9779;MQMR=59.9579;NS=92;NUMALT=1;ODDS=0.407619;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=21331;QR=58457;RO=1590;RPP=1251.74;RPPR=3360.77;RUN=1;SAF=269;SAP=11.8923;SAR=318;SRF=787;SRP=3.35992;SRR=803;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:10.0653:12:0:0:12:433:-10,-3.61236,0 0/1:0.0579775:9:0:0:9:319:-10,-2.70927,0 1/1:76.2918:34:0:0:34:1232:-10,-10,0 1/1:28.1271:18:0:0:18:646:-10,-5.41854,0 0/0:57.6659:20:20:722:0:0:0,-6.0206,-10 0/0:12.5114:5:5:190:0:0:0,-1.50515,-10 0/0:99:52:52:1868:0:0:0,-10,-10 0/0:81.7482:28:28:1006:0:0:0,-8.42884,-10 1/1:10.0653:12:0:0:12:425:-10,-3.61236,0 0/0:21.5423:8:8:303:0:0:0,-2.40824,-10 0/0:12.5114:5:5:190:0:0:0,-1.50515,-10 0/0:12.5114:5:5:164:0:0:0,-1.50515,-10 0/0:90.7786:31:31:1136:0:0:0,-9.33193,-10 0/0:99:44:44:1634:0:0:0,-10,-10 0/0:66.6968:23:23:867:0:0:0,-6.92369,-10 0/0:93.7883:32:32:1168:0:0:0,-9.63296,-10 0/0:96.7974:33:33:1196:0:0:0,-9.93399,-10 0/0:18.532:7:7:259:0:0:0,-2.10721,-10 0/0:69.7071:24:24:874:0:0:0,-7.22472,-10 0/0:99:45:45:1630:0:0:0,-10,-10 0/0:42.6144:15:15:567:0:0:0,-4.51545,-10 0/0:99:37:37:1343:0:0:0,-10,-10 0/0:15.5217:6:6:227:0:0:0,-1.80618,-10 0/0:93.7883:32:32:1187:0:0:0,-9.63296,-10 0/0:66.6968:23:23:864:0:0:0,-6.92369,-10 0/0:90.7786:31:31:1161:0:0:0,-9.33193,-10 0/0:63.6865:22:22:803:0:0:0,-6.62266,-10 0/0:48.635:17:17:618:0:0:0,-5.11751,-10 0/0:72.7174:25:25:895:0:0:0,-7.52575,-10 0/0:93.7883:32:32:1207:0:0:0,-9.63296,-10 0/0:27.5629:10:10:373:0:0:0,-3.0103,-10 0/0:21.5423:8:8:304:0:0:0,-2.40824,-10 0/0:75.7277:26:26:965:0:0:0,-7.82678,-10 0/0:45.6247:16:16:574:0:0:0,-4.81648,-10 0/0:36.5938:13:13:471:0:0:0,-3.91339,-10 0/0:12.5114:5:5:190:0:0:0,-1.50515,-10 0/0:36.5938:13:13:477:0:0:0,-3.91339,-10 0/0:99:38:38:1411:0:0:0,-10,-10 0/0:60.6762:21:21:781:0:0:0,-6.32163,-10 0/0:84.7584:29:29:1093:0:0:0,-8.72987,-10 0/0:99:36:36:1343:0:0:0,-10,-10 0/0:90.7786:31:31:1140:0:0:0,-9.33193,-10 0/0:72.7174:25:25:926:0:0:0,-7.52575,-10 0/0:99:50:50:1816:0:0:0,-10,-10 0/0:99:35:35:1284:0:0:0,-10,-10 0/0:54.6556:19:19:659:0:0:0,-5.71957,-10 0/0:99:61:61:2228:0:0:0,-10,-10 0/0:99:34:34:1272:0:0:0,-10,-10 0/0:33.5835:12:12:430:0:0:0,-3.61236,-10 0/0:99:43:43:1614:0:0:0,-10,-10 0/0:60.6762:21:21:787:0:0:0,-6.32163,-10 0/0:99:39:39:1425:0:0:0,-10,-10 0/0:57.6659:20:20:749:0:0:0,-6.0206,-10 0/0:36.5938:13:13:450:0:0:0,-3.91339,-10 0/0:99:39:39:1455:0:0:0,-10,-10 0/0:48.635:17:17:634:0:0:0,-5.11751,-10 0/0:63.6865:22:22:817:0:0:0,-6.62266,-10 0/0:18.532:7:7:244:0:0:0,-2.10721,-10 0/0:69.7071:24:24:880:0:0:0,-7.22472,-10 0/0:45.6247:16:16:597:0:0:0,-4.81648,-10 0/0:99:38:37:1362:0:0:0,-10,-10 0/0:54.6556:19:19:698:0:0:0,-5.71957,-10 0/0:99:61:61:2254:0:0:0,-10,-10 0/1:99:16:8:269:8:304:-10,0,-10 0/0:24.5526:9:9:341:0:0:0,-2.70927,-10 0/1:99:54:27:1000:27:939:-10,0,-10 0/0:48.635:17:17:639:0:0:0,-5.11751,-10 1/1:13.0756:13:0:0:13:446:-10,-3.91339,0 0/1:99:43:27:953:16:582:-10,0,-10 0/1:0.236704:11:0:0:11:403:-10,-3.31133,0 1/1:46.1889:24:0:0:24:856:-10,-7.22472,0 1/1:61.2404:29:0:0:29:1033:-10,-8.72987,0 1/1:52.2095:26:0:0:26:947:-10,-7.82678,0 1/1:34.1477:20:0:0:20:741:-10,-6.0206,0 1/1:79.3021:35:0:0:35:1322:-10,-10,0 1/1:40.1683:22:0:0:22:801:-10,-6.62266,0 1/1:13.0756:13:0:0:13:490:-10,-3.91339,0 1/1:37.158:21:0:0:21:752:-10,-6.32163,0 0/1:0.11674:10:0:0:10:348:-10,-3.0103,0 1/1:10.0653:12:0:0:12:449:-10,-3.61236,0 1/1:91.3427:39:0:0:39:1361:-10,-10,0 1/1:67.261:31:0:0:31:1167:-10,-9.33193,0 1/1:61.2404:29:0:0:29:1077:-10,-8.72987,0 1/1:52.2095:26:0:0:26:928:-10,-7.82678,0 1/1:52.2095:26:0:0:26:964:-10,-7.82678,0 0/0:12.5114:5:5:186:0:0:0,-1.50515,-10 0/0:24.0442:25:23:847:1:38:0,-2.31451,-10 0/0:33.5835:12:12:440:0:0:0,-3.61236,-10 0/1:0.000899972:3:0:0:3:114:-10,-0.90309,0 1/1:34.1477:20:0:0:20:758:-10,-6.0206,0 1/1:34.1477:20:0:0:20:701:-10,-6.0206,0 1/1:34.1477:20:0:0:20:755:-10,-6.0206,0 scaffold_6 2862107 . A T 5407.09 . AB=0.507463;ABP=3.10753;AC=19;AF=0.103261;AN=184;AO=196;CIGAR=1X;DP=1563;DPB=1563;DPRA=1.29053;EPP=3.18756;EPPR=4.00602;GTI=0;LEN=1;MEANALT=1.06667;MQM=59.9286;MQMR=59.9552;NS=92;NUMALT=1;ODDS=1.99354;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7299;QR=49441;RO=1363;RPP=428.619;RPPR=2962.73;RUN=1;SAF=96;SAP=3.18756;SAR=100;SRF=694;SRP=4.00602;SRR=669;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.9763:15:15:525:0:0:0,-4.51545,-10 0/0:34.9351:12:11:383:0:0:0,-3.31133,-10 0/0:68.0484:22:22:762:0:0:0,-6.62266,-10 0/0:46.9763:15:15:537:0:0:0,-4.51545,-10 0/1:99:14:5:145:9:338:-10,0,-10 1/1:16.4974:12:0:0:12:444:-10,-3.61236,0 0/0:98.147:32:32:1202:0:0:0,-9.63296,-10 0/0:74.069:24:24:855:0:0:0,-7.22472,-10 1/1:13.4871:11:0:0:11:395:-10,-3.31133,0 0/0:10.8527:3:3:92:0:0:0,-0.90309,-8.58667 0/0:28.9145:9:9:341:0:0:0,-2.70927,-10 0/0:19.8836:6:6:203:0:0:0,-1.80618,-10 0/0:99:35:35:1260:0:0:0,-10,-10 0/0:99:33:33:1175:0:0:0,-9.93399,-10 0/0:83.0998:28:27:1014:0:0:0,-8.12781,-10 0/0:99:33:33:1165:0:0:0,-9.93399,-10 0/0:74.069:24:24:850:0:0:0,-7.22472,-10 0/0:28.9145:9:9:320:0:0:0,-2.70927,-10 0/0:62.0278:20:20:670:0:0:0,-6.0206,-10 0/1:99:22:9:334:12:429:-10,0,-10 0/0:80.0895:26:26:959:0:0:0,-7.82678,-10 0/1:99:20:10:379:10:378:-10,0,-10 0/0:40.9557:13:13:476:0:0:0,-3.91339,-10 0/0:28.9145:9:9:339:0:0:0,-2.70927,-10 0/0:56.0072:18:18:667:0:0:0,-5.41854,-10 0/0:37.9454:12:12:435:0:0:0,-3.61236,-10 0/0:46.9763:15:15:563:0:0:0,-4.51545,-10 0/0:22.8939:7:7:233:0:0:0,-2.10721,-10 0/0:40.9557:13:13:476:0:0:0,-3.91339,-10 0/0:99:36:36:1303:0:0:0,-10,-10 0/0:25.9042:8:8:286:0:0:0,-2.40824,-10 0/0:19.8836:6:6:225:0:0:0,-1.80618,-10 0/0:40.9557:13:13:482:0:0:0,-3.91339,-10 0/0:28.9145:9:9:318:0:0:0,-2.70927,-10 0/0:36.4807:20:19:688:1:16:0,-3.11957,-10 0/0:28.9145:9:9:309:0:0:0,-2.70927,-10 0/0:31.9248:10:10:378:0:0:0,-3.0103,-10 0/1:99:22:12:382:10:355:-10,0,-10 0/0:37.9454:13:12:421:0:0:0,-3.61236,-10 0/0:37.9454:12:12:450:0:0:0,-3.61236,-10 0/0:65.0381:21:21:781:0:0:0,-6.32163,-10 0/1:75.7795:13:2:76:11:417:-10,0,-5.1987 0/0:59.0175:19:19:695:0:0:0,-5.71957,-10 0/1:99:28:12:452:16:608:-10,0,-10 0/0:46.9763:15:15:547:0:0:0,-4.51545,-10 0/0:49.9866:16:16:596:0:0:0,-4.81648,-10 0/0:86.1099:28:28:1058:0:0:0,-8.42884,-10 0/0:77.0793:25:25:918:0:0:0,-7.52575,-10 0/0:49.9866:16:16:586:0:0:0,-4.81648,-10 0/0:89.12:29:29:1094:0:0:0,-8.72987,-10 0/0:31.9248:10:10:376:0:0:0,-3.0103,-10 0/0:89.12:29:29:1018:0:0:0,-8.72987,-10 0/0:62.0278:20:20:749:0:0:0,-6.0206,-10 0/0:10.8527:3:3:113:0:0:0,-0.90309,-10 0/0:77.0793:25:25:942:0:0:0,-7.52575,-10 0/0:10.8527:3:3:114:0:0:0,-0.90309,-10 0/1:29.6907:21:19:678:2:76:-3.22059,0,-10 0/0:22.8939:7:7:228:0:0:0,-2.10721,-10 1/1:43.5901:21:0:0:21:794:-10,-6.32163,0 0/0:22.8939:7:7:266:0:0:0,-2.10721,-10 0/0:71.0587:23:23:848:0:0:0,-6.92369,-10 0/0:46.9763:15:15:568:0:0:0,-4.51545,-10 0/0:80.0895:26:26:952:0:0:0,-7.82678,-10 0/0:37.9454:12:12:433:0:0:0,-3.61236,-10 0/0:40.9557:13:13:458:0:0:0,-3.91339,-10 0/1:99:29:14:488:15:568:-10,0,-10 0/0:68.0484:22:22:803:0:0:0,-6.62266,-10 0/0:37.9454:12:12:436:0:0:0,-3.61236,-10 0/0:62.0278:20:20:733:0:0:0,-6.0206,-10 0/0:40.9557:13:13:470:0:0:0,-3.91339,-10 0/0:37.9454:12:12:391:0:0:0,-3.61236,-10 1/1:55.6313:25:0:0:25:943:-10,-7.52575,0 1/1:52.621:24:0:0:24:895:-10,-7.22472,0 0/0:31.9248:10:10:370:0:0:0,-3.0103,-10 0/1:99:32:15:533:17:643:-10,0,-10 0/0:19.8836:6:6:225:0:0:0,-1.80618,-10 0/0:40.9557:13:13:476:0:0:0,-3.91339,-10 0/0:37.9454:12:12:426:0:0:0,-3.61236,-10 0/0:16.8733:5:5:188:0:0:0,-1.50515,-10 0/0:49.9866:16:16:558:0:0:0,-4.81648,-10 0/0:77.0793:25:25:916:0:0:0,-7.52575,-10 0/0:65.0381:21:21:731:0:0:0,-6.32163,-10 0/0:40.9557:13:13:474:0:0:0,-3.91339,-10 0/0:52.9969:17:17:580:0:0:0,-5.11751,-10 0/0:65.0381:21:21:765:0:0:0,-6.32163,-10 0/0:28.9145:9:9:338:0:0:0,-2.70927,-10 0/0:43.966:14:14:529:0:0:0,-4.21442,-10 0/0:37.9454:12:12:444:0:0:0,-3.61236,-10 0/0:34.9351:11:11:415:0:0:0,-3.31133,-10 0/0:52.9969:17:17:638:0:0:0,-5.11751,-10 0/0:68.0484:22:22:820:0:0:0,-6.62266,-10 0/0:46.9763:15:15:546:0:0:0,-4.51545,-10 scaffold_6 2952662 . C A 868.527 . AB=0.708333;ABP=21.1059;AC=3;AF=0.0164835;AN=182;AO=34;CIGAR=1X;DP=1408;DPB=1408;DPRA=1.03529;EPP=5.30951;EPPR=5.93459;GTI=1;LEN=1;MEANALT=1;MQM=59.6176;MQMR=59.9228;NS=91;NUMALT=1;ODDS=2.49341;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1254;QR=49668;RO=1373;RPP=60.4905;RPPR=2663.51;RUN=1;SAF=14;SAP=5.30951;SAR=20;SRF=651;SRP=10.9829;SRR=722;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.5585:15:15:524:0:0:0,-4.51545,-10 0/0:39.4967:9:9:313:0:0:0,-2.70927,-10 0/0:84.6511:24:24:881:0:0:0,-7.22472,-10 0/0:42.507:10:10:334:0:0:0,-3.0103,-10 0/0:42.507:10:10:379:0:0:0,-3.0103,-10 0/0:21.4349:3:3:114:0:0:0,-0.90309,-10 0/0:84.6511:24:24:804:0:0:0,-7.22472,-10 0/0:87.6613:25:25:872:0:0:0,-7.52575,-10 0/0:48.5276:12:12:446:0:0:0,-3.61236,-10 0/0:30.4658:6:6:225:0:0:0,-1.80618,-10 0/0:27.4555:5:5:163:0:0:0,-1.50515,-10 0/0:42.507:10:10:373:0:0:0,-3.0103,-10 0/0:72.61:20:20:733:0:0:0,-6.0206,-10 0/0:93.6813:27:27:1007:0:0:0,-8.12781,-10 0/0:93.6813:27:27:981:0:0:0,-8.12781,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:48.5276:12:12:435:0:0:0,-3.61236,-10 0/0:18.4246:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:29:29:1021:0:0:0,-8.72987,-10 0/0:84.6511:24:24:847:0:0:0,-7.22472,-10 0/0:48.5276:12:12:429:0:0:0,-3.61236,-10 0/0:99:30:30:1084:0:0:0,-9.0309,-10 0/0:24.4452:4:4:151:0:0:0,-1.20412,-10 0/0:57.5585:15:15:522:0:0:0,-4.51545,-10 0/0:75.6203:22:21:758:0:0:0,-6.32163,-10 0/0:42.507:10:10:350:0:0:0,-3.0103,-10 0/0:51.5379:13:13:447:0:0:0,-3.91339,-10 0/0:30.4658:6:6:203:0:0:0,-1.80618,-10 0/0:72.61:20:20:746:0:0:0,-6.0206,-10 0/0:78.6305:22:22:752:0:0:0,-6.62266,-10 0/0:27.4555:5:5:185:0:0:0,-1.50515,-10 0/0:33.4761:7:7:265:0:0:0,-2.10721,-10 0/0:72.61:20:20:695:0:0:0,-6.0206,-10 0/0:33.4761:7:7:251:0:0:0,-2.10721,-10 0/0:39.4967:9:9:339:0:0:0,-2.70927,-10 0/0:27.4555:5:5:190:0:0:0,-1.50515,-10 0/0:42.507:10:10:372:0:0:0,-3.0103,-10 0/0:72.61:20:20:753:0:0:0,-6.0206,-10 0/0:57.5585:15:15:534:0:0:0,-4.51545,-10 0/0:48.5276:12:12:441:0:0:0,-3.61236,-10 0/0:78.6305:22:22:785:0:0:0,-6.62266,-10 0/0:60.5688:16:16:574:0:0:0,-4.81648,-10 0/0:42.507:10:10:322:0:0:0,-3.0103,-10 0/0:60.5688:16:16:599:0:0:0,-4.81648,-10 0/0:78.6305:22:22:818:0:0:0,-6.62266,-10 0/0:63.5791:17:17:619:0:0:0,-5.11751,-10 0/0:99:42:42:1569:0:0:0,-10,-10 0/0:75.6203:21:21:759:0:0:0,-6.32163,-10 0/0:54.5482:14:14:509:0:0:0,-4.21442,-10 0/0:87.6613:25:25:848:0:0:0,-7.52575,-10 0/0:33.4761:7:7:261:0:0:0,-2.10721,-10 0/0:99:39:39:1456:0:0:0,-10,-10 0/0:54.5482:14:14:532:0:0:0,-4.21442,-10 0/0:24.4452:4:4:151:0:0:0,-1.20412,-10 0/0:99:32:32:1151:0:0:0,-9.63296,-10 0/0:36.4864:8:8:303:0:0:0,-2.40824,-10 0/0:42.507:10:10:373:0:0:0,-3.0103,-10 0/0:21.4349:3:3:114:0:0:0,-0.90309,-10 0/0:51.5379:13:13:468:0:0:0,-3.91339,-10 0/0:36.4864:8:8:271:0:0:0,-2.40824,-10 0/0:63.5791:17:17:607:0:0:0,-5.11751,-10 0/0:72.61:20:20:720:0:0:0,-6.0206,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:51.5379:13:13:485:0:0:0,-3.91339,-10 0/0:57.5585:15:15:554:0:0:0,-4.51545,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:57.5585:15:15:545:0:0:0,-4.51545,-10 0/0:39.4967:9:9:302:0:0:0,-2.70927,-10 0/0:84.6511:24:24:847:0:0:0,-7.22472,-10 0/0:30.4658:6:6:225:0:0:0,-1.80618,-10 0/0:51.5379:13:13:480:0:0:0,-3.91339,-10 0/0:81.6408:23:23:817:0:0:0,-6.92369,-10 0/0:87.6613:25:25:916:0:0:0,-7.52575,-10 0/0:60.5688:16:16:579:0:0:0,-4.81648,-10 0/0:48.5276:12:12:446:0:0:0,-3.61236,-10 0/0:30.4658:6:6:226:0:0:0,-1.80618,-10 0/0:30.4658:6:6:227:0:0:0,-1.80618,-10 0/0:51.5379:13:13:481:0:0:0,-3.91339,-10 0/0:27.4555:5:5:185:0:0:0,-1.50515,-10 0/0:33.4761:7:7:262:0:0:0,-2.10721,-10 0/0:69.5997:19:19:694:0:0:0,-5.71957,-10 0/0:60.5688:16:16:600:0:0:0,-4.81648,-10 0/0:75.6203:21:21:758:0:0:0,-6.32163,-10 0/1:99:15:5:176:10:365:-10,0,-10 0/0:57.5585:15:15:564:0:0:0,-4.51545,-10 .:.:.:.:.:.:.:. 0/0:63.5791:17:17:598:0:0:0,-5.11751,-10 0/0:42.507:10:10:351:0:0:0,-3.0103,-10 0/0:24.4452:4:4:129:0:0:0,-1.20412,-10 0/1:99:18:9:339:9:327:-10,0,-10 0/0:54.5482:14:14:479:0:0:0,-4.21442,-10 0/1:0.325326:15:0:0:15:562:-10,-4.51545,0 scaffold_6 3020443 . T G 463.185 . AB=0.540541;ABP=3.5385;AC=2;AF=0.010989;AN=182;AO=20;CIGAR=1X;DP=1330;DPB=1330;DPRA=1.2734;EPP=4.74748;EPPR=3.24936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9472;NS=91;NUMALT=1;ODDS=6.4668;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=703;QR=47540;RO=1308;RPP=46.4397;RPPR=2834.62;RUN=1;SAF=8;SAP=4.74748;SAR=12;SRF=659;SRP=3.17631;SRR=649;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.2702:18:18:626:0:0:0,-5.41854,-10 0/0:46.1775:9:9:342:0:0:0,-2.70927,-10 0/0:58.2187:13:13:463:0:0:0,-3.91339,-10 0/0:49.1878:10:10:367:0:0:0,-3.0103,-10 0/1:99:16:7:266:9:302:-10,0,-10 0/0:34.1363:5:5:187:0:0:0,-1.50515,-10 0/0:82.3011:21:21:775:0:0:0,-6.32163,-10 0/0:70.2599:17:17:615:0:0:0,-5.11751,-10 0/0:52.1981:11:11:375:0:0:0,-3.31133,-10 0/0:31.126:4:4:152:0:0:0,-1.20412,-10 0/0:40.1569:7:7:232:0:0:0,-2.10721,-10 0/0:40.1569:7:7:241:0:0:0,-2.10721,-10 0/0:76.2805:19:19:681:0:0:0,-5.71957,-10 0/0:94.342:25:25:896:0:0:0,-7.52575,-10 0/0:79.2908:20:20:725:0:0:0,-6.0206,-10 0/1:99:21:10:379:11:401:-10,0,-10 0/0:55.2084:12:12:415:0:0:0,-3.61236,-10 0/0:40.1569:7:7:250:0:0:0,-2.10721,-10 0/0:85.3114:22:22:814:0:0:0,-6.62266,-10 0/0:97.3492:26:26:958:0:0:0,-7.82678,-10 0/0:58.2187:13:13:475:0:0:0,-3.91339,-10 0/0:88.3216:23:23:832:0:0:0,-6.92369,-10 0/0:34.1363:5:5:172:0:0:0,-1.50515,-10 0/0:79.2908:20:20:723:0:0:0,-6.0206,-10 0/0:67.2496:16:16:599:0:0:0,-4.81648,-10 0/0:79.2908:20:20:757:0:0:0,-6.0206,-10 0/0:79.2908:20:20:755:0:0:0,-6.0206,-10 0/0:46.1775:9:9:315:0:0:0,-2.70927,-10 0/0:99:27:27:948:0:0:0,-8.12781,-10 0/0:99:27:27:1003:0:0:0,-8.12781,-10 0/0:34.1363:5:5:165:0:0:0,-1.50515,-10 0/0:28.1157:3:3:114:0:0:0,-0.90309,-10 0/0:55.2084:12:12:432:0:0:0,-3.61236,-10 0/0:31.126:4:4:128:0:0:0,-1.20412,-10 0/0:64.2393:15:15:537:0:0:0,-4.51545,-10 0/0:43.1672:8:8:304:0:0:0,-2.40824,-10 0/0:40.1569:7:7:265:0:0:0,-2.10721,-10 0/0:70.2599:17:17:630:0:0:0,-5.11751,-10 0/0:40.1569:7:7:266:0:0:0,-2.10721,-10 0/0:64.2393:15:15:553:0:0:0,-4.51545,-10 0/0:85.3114:22:22:823:0:0:0,-6.62266,-10 0/0:58.2187:13:13:442:0:0:0,-3.91339,-10 0/0:82.3011:21:21:764:0:0:0,-6.32163,-10 0/0:99:39:39:1459:0:0:0,-10,-10 0/0:64.2393:15:15:548:0:0:0,-4.51545,-10 0/0:46.1775:9:9:324:0:0:0,-2.70927,-10 0/0:91.3318:24:24:866:0:0:0,-7.22472,-10 0/0:97.3492:26:26:916:0:0:0,-7.82678,-10 0/0:46.1775:9:9:319:0:0:0,-2.70927,-10 0/0:94.342:25:25:898:0:0:0,-7.52575,-10 0/0:46.1775:9:9:331:0:0:0,-2.70927,-10 0/0:94.342:25:25:902:0:0:0,-7.52575,-10 0/0:67.2496:16:16:602:0:0:0,-4.81648,-10 0/0:37.1466:6:6:210:0:0:0,-1.80618,-10 0/0:91.3318:24:24:891:0:0:0,-7.22472,-10 0/0:55.2084:12:12:425:0:0:0,-3.61236,-10 0/0:94.342:25:25:879:0:0:0,-7.52575,-10 0/0:46.1775:9:9:300:0:0:0,-2.70927,-10 0/0:43.1672:8:8:280:0:0:0,-2.40824,-10 0/0:55.2084:12:12:449:0:0:0,-3.61236,-10 0/0:61.229:15:14:498:0:0:0,-4.21442,-10 0/0:43.1672:8:8:289:0:0:0,-2.40824,-10 0/0:79.2908:20:20:743:0:0:0,-6.0206,-10 0/0:73.2702:18:18:672:0:0:0,-5.41854,-10 0/0:37.1466:6:6:214:0:0:0,-1.80618,-10 0/0:61.229:14:14:461:0:0:0,-4.21442,-10 0/0:79.2908:20:20:737:0:0:0,-6.0206,-10 0/0:40.1569:7:7:232:0:0:0,-2.10721,-10 0/0:97.3492:26:26:972:0:0:0,-7.82678,-10 0/0:43.1672:8:8:279:0:0:0,-2.40824,-10 0/0:49.1878:11:10:374:0:0:0,-3.0103,-10 0/0:76.2805:19:19:672:0:0:0,-5.71957,-10 0/0:76.2805:19:19:674:0:0:0,-5.71957,-10 0/0:46.1775:9:9:334:0:0:0,-2.70927,-10 0/0:88.3216:23:23:839:0:0:0,-6.92369,-10 0/0:61.229:14:14:527:0:0:0,-4.21442,-10 0/0:46.1775:9:9:337:0:0:0,-2.70927,-10 0/0:34.1363:5:5:179:0:0:0,-1.50515,-10 .:.:.:.:.:.:.:. 0/0:40.1569:7:7:265:0:0:0,-2.10721,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:82.3011:21:21:758:0:0:0,-6.32163,-10 0/0:73.2702:18:18:630:0:0:0,-5.41854,-10 0/0:64.2393:15:15:559:0:0:0,-4.51545,-10 0/0:58.2187:13:13:490:0:0:0,-3.91339,-10 0/0:31.126:4:4:142:0:0:0,-1.20412,-10 0/0:49.1878:10:10:364:0:0:0,-3.0103,-10 0/0:46.1775:9:9:333:0:0:0,-2.70927,-10 0/0:40.1569:7:7:261:0:0:0,-2.10721,-10 0/0:64.2393:15:15:546:0:0:0,-4.51545,-10 0/0:46.1775:9:9:342:0:0:0,-2.70927,-10 0/0:52.1981:11:11:412:0:0:0,-3.31133,-10 scaffold_6 3710199 . G A 776.622 . AB=0;ABP=0;AC=2;AF=0.0108696;AN=184;AO=32;CIGAR=1X;DP=2438;DPB=2438;DPRA=1.05793;EPP=4.09604;EPPR=4.17997;GTI=0;LEN=1;MEANALT=1;MQM=59.4375;MQMR=59.9846;NS=92;NUMALT=1;ODDS=9.8784;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1136;QR=87171;RO=2406;RPP=72.4974;RPPR=5175.59;RUN=1;SAF=14;SAP=4.09604;SAR=18;SRF=1219;SRP=3.93448;SRR=1187;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:91.0651:19:19:715:0:0:0,-5.71957,-10 0/0:48.9224:5:5:184:0:0:0,-1.50515,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:97.0813:21:21:770:0:0:0,-6.32163,-10 0/0:85.0456:17:17:588:0:0:0,-5.11751,-10 0/0:66.9842:11:11:412:0:0:0,-3.31133,-10 0/0:99:57:57:2054:0:0:0,-10,-10 0/0:99:31:31:1114:0:0:0,-9.33193,-10 0/0:85.0456:17:17:602:0:0:0,-5.11751,-10 0/0:57.9533:8:8:278:0:0:0,-2.40824,-10 0/0:82.0357:16:16:582:0:0:0,-4.81648,-10 0/0:82.0357:16:16:571:0:0:0,-4.81648,-10 0/0:99:25:25:933:0:0:0,-7.52575,-10 0/0:99:48:48:1725:0:0:0,-10,-10 0/0:99:34:34:1225:0:0:0,-10,-10 1/1:61.5337:31:0:0:31:1120:-10,-9.33193,0 0/0:99:37:37:1341:0:0:0,-10,-10 0/0:69.9945:12:12:429:0:0:0,-3.61236,-10 0/0:99:23:23:840:0:0:0,-6.92369,-10 0/0:99:50:50:1805:0:0:0,-10,-10 0/0:79.0253:15:15:551:0:0:0,-4.51545,-10 0/0:99:46:46:1667:0:0:0,-10,-10 0/0:66.9842:11:11:362:0:0:0,-3.31133,-10 0/0:99:33:33:1122:0:0:0,-9.93399,-10 0/0:99:22:22:778:0:0:0,-6.62266,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:97.0813:21:21:788:0:0:0,-6.32163,-10 0/0:99:28:28:1019:0:0:0,-8.42884,-10 0/0:99:39:39:1405:0:0:0,-10,-10 0/0:60.9636:9:9:331:0:0:0,-2.70927,-10 0/0:48.9224:5:5:190:0:0:0,-1.50515,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:69.9945:12:12:428:0:0:0,-3.61236,-10 0/0:99:23:23:842:0:0:0,-6.92369,-10 0/0:73.0048:13:13:455:0:0:0,-3.91339,-10 0/0:48.9224:5:5:180:0:0:0,-1.50515,-10 0/0:99:42:42:1502:0:0:0,-10,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:94.0739:20:20:727:0:0:0,-6.0206,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:99:30:30:1037:0:0:0,-9.0309,-10 0/0:99:28:28:1011:0:0:0,-8.42884,-10 0/0:99:50:50:1746:0:0:0,-10,-10 0/0:99:40:40:1452:0:0:0,-10,-10 0/0:94.0739:20:20:692:0:0:0,-6.0206,-10 0/0:99:75:75:2769:0:0:0,-10,-10 0/0:99:37:37:1379:0:0:0,-10,-10 0/0:82.0357:16:16:596:0:0:0,-4.81648,-10 0/0:99:47:47:1715:0:0:0,-10,-10 0/0:85.0456:17:17:642:0:0:0,-5.11751,-10 0/0:99:49:49:1778:0:0:0,-10,-10 0/0:57.9533:8:8:280:0:0:0,-2.40824,-10 0/0:66.9842:11:11:382:0:0:0,-3.31133,-10 0/0:99:55:55:2010:0:0:0,-10,-10 0/0:97.0813:21:21:786:0:0:0,-6.32163,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:54.943:7:7:215:0:0:0,-2.10721,-10 0/0:97.0813:21:21:778:0:0:0,-6.32163,-10 0/0:94.0739:20:20:692:0:0:0,-6.0206,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:99:24:24:885:0:0:0,-7.22472,-10 0/0:99:53:53:1905:0:0:0,-10,-10 0/0:99:28:28:1049:0:0:0,-8.42884,-10 0/0:85.0456:17:17:627:0:0:0,-5.11751,-10 0/0:99:50:50:1800:0:0:0,-10,-10 0/0:99:27:27:998:0:0:0,-8.12781,-10 0/0:79.0253:15:15:554:0:0:0,-4.51545,-10 0/0:99:55:55:1900:0:0:0,-10,-10 0/0:97.0813:21:21:759:0:0:0,-6.32163,-10 0/0:99:30:30:1067:0:0:0,-9.0309,-10 0/0:99:39:39:1331:0:0:0,-10,-10 0/0:99:28:28:1056:0:0:0,-8.42884,-10 0/0:99:36:36:1303:0:0:0,-10,-10 0/0:99:29:29:1049:0:0:0,-8.72987,-10 0/0:88.0562:18:18:662:0:0:0,-5.41854,-10 0/0:79.0253:15:15:546:0:0:0,-4.51545,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:60.9636:9:9:342:0:0:0,-2.70927,-10 0/0:85.0456:17:17:633:0:0:0,-5.11751,-10 0/0:99:45:45:1625:0:0:0,-10,-10 0/0:99:29:29:1018:0:0:0,-8.72987,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:99:39:39:1460:0:0:0,-10,-10 0/0:54.943:7:7:238:0:0:0,-2.10721,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:97.0813:21:21:791:0:0:0,-6.32163,-10 0/0:42.9018:3:3:114:0:0:0,-0.90309,-10 0/0:91.0651:19:19:692:0:0:0,-5.71957,-10 0/0:82.2405:25:24:883:1:16:0,-4.52781,-10 0/0:57.9533:8:8:304:0:0:0,-2.40824,-10 scaffold_6 3862485 . T C 159.915 . AB=0.571429;ABP=3.63072;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=2788;DPB=2788;DPRA=0.459265;EPP=4.09604;EPPR=8.79151;GTI=0;LEN=1;MEANALT=1;MQM=38.625;MQMR=49.1249;NS=92;NUMALT=1;ODDS=16.9712;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=290;QR=101242;RO=2778;RPP=20.3821;RPPR=6035.36;RUN=1;SAF=3;SAP=4.09604;SAR=5;SRF=1432;SRP=8.79151;SRR=1346;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:18:18:638:0:0:0,-5.41854,-10 0/0:79.7255:4:4:146:0:0:0,-1.20412,-10 0/0:99:21:21:734:0:0:0,-6.32163,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:99:23:23:827:0:0:0,-6.92369,-10 0/0:97.7834:10:10:371:0:0:0,-3.0103,-10 0/0:99:70:70:2595:0:0:0,-10,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:99:23:23:844:0:0:0,-6.92369,-10 0/0:73.7049:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:20:20:709:0:0:0,-6.0206,-10 0/0:99:13:13:446:0:0:0,-3.91339,-10 0/0:99:56:55:1982:0:0:0,-10,-10 0/0:99:50:50:1839:0:0:0,-10,-10 0/0:99:38:38:1374:0:0:0,-10,-10 0/0:99:30:30:1079:0:0:0,-9.0309,-10 0/0:99:25:25:926:0:0:0,-7.52575,-10 0/0:97.7834:10:10:356:0:0:0,-3.0103,-10 0/0:99:23:23:812:0:0:0,-6.92369,-10 0/0:99:42:42:1511:0:0:0,-10,-10 0/0:99:30:30:1132:0:0:0,-9.0309,-10 0/0:99:37:37:1369:0:0:0,-10,-10 0/0:99:21:21:748:0:0:0,-6.32163,-10 0/0:99:46:46:1708:0:0:0,-10,-10 0/0:99:24:24:872:0:0:0,-7.22472,-10 0/0:99:41:41:1470:0:0:0,-10,-10 0/0:99:24:24:858:0:0:0,-7.22472,-10 0/0:99:33:33:1208:0:0:0,-9.93399,-10 0/0:99:18:18:640:0:0:0,-5.41854,-10 0/0:99:61:61:2211:0:0:0,-10,-10 0/0:91.7657:8:8:298:0:0:0,-2.40824,-10 0/0:76.7152:3:3:105:0:0:0,-0.90309,-9.8 0/0:99:12:12:450:0:0:0,-3.61236,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:99:17:17:607:0:0:0,-5.11751,-10 0/0:99:36:36:1246:0:0:0,-10,-10 0/0:99:22:22:799:0:0:0,-6.62266,-10 0/0:99:35:35:1303:0:0:0,-10,-10 0/0:99:30:30:1078:0:0:0,-9.0309,-10 0/0:99:69:69:2567:0:0:0,-10,-10 0/0:99:23:23:840:0:0:0,-6.92369,-10 0/0:99:23:23:830:0:0:0,-6.92369,-10 0/0:99:71:71:2623:0:0:0,-10,-10 0/0:99:38:38:1344:0:0:0,-10,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:99:106:106:3800:0:0:0,-10,-10 0/0:99:64:64:2359:0:0:0,-10,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:99:62:62:2183:0:0:0,-10,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:99:82:82:3023:0:0:0,-10,-10 0/0:99:11:11:401:0:0:0,-3.31133,-10 0/0:99:13:13:466:0:0:0,-3.91339,-10 0/0:99:87:87:3140:0:0:0,-10,-10 0/0:94.7751:9:9:316:0:0:0,-2.70927,-10 0/0:99:59:59:2099:0:0:0,-10,-10 0/0:99:14:14:516:0:0:0,-4.21442,-10 0/0:99:36:36:1346:0:0:0,-10,-10 0/0:94.7751:9:9:335:0:0:0,-2.70927,-10 0/0:99:38:38:1415:0:0:0,-10,-10 0/0:99:49:49:1812:0:0:0,-10,-10 0/0:99:56:56:2057:0:0:0,-10,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:99:16:16:583:0:0:0,-4.81648,-10 0/0:99:40:40:1494:0:0:0,-10,-10 0/0:99:20:20:736:0:0:0,-6.0206,-10 0/0:99:11:11:392:0:0:0,-3.31133,-10 0/0:99:65:65:2339:0:0:0,-10,-10 0/0:99:17:17:623:0:0:0,-5.11751,-10 0/0:99:25:25:909:0:0:0,-7.52575,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:99:37:36:1295:0:0:0,-10,-10 0/0:99:16:16:602:0:0:0,-4.81648,-10 0/0:99:45:45:1584:0:0:0,-10,-10 0/0:99:19:19:697:0:0:0,-5.71957,-10 0/0:99:13:13:468:0:0:0,-3.91339,-10 0/0:99:17:17:609:0:0:0,-5.11751,-10 0/0:88.7559:7:7:241:0:0:0,-2.10721,-10 0/0:97.7834:10:10:380:0:0:0,-3.0103,-10 0/0:99:36:36:1362:0:0:0,-10,-10 0/0:99:25:25:937:0:0:0,-7.52575,-10 0/0:99:23:23:844:0:0:0,-6.92369,-10 0/0:99:17:17:638:0:0:0,-5.11751,-10 0/0:99:26:26:968:0:0:0,-7.82678,-10 0/0:85.7459:6:6:227:0:0:0,-1.80618,-10 0/0:99:46:46:1724:0:0:0,-10,-10 0/0:99:41:41:1458:0:0:0,-10,-10 0/0:85.7459:6:6:228:0:0:0,-1.80618,-10 0/1:99:14:6:211:8:290:-10,0,-10 0/0:97.7834:10:10:379:0:0:0,-3.0103,-10 0/0:99:15:15:486:0:0:0,-4.51545,-10 scaffold_6 3867765 . A T 169.019 . AB=0.615385;ABP=4.51363;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1540;DPB=1540;DPRA=0.774722;EPP=4.09604;EPPR=3.25031;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9928;NS=92;NUMALT=1;ODDS=10.1273;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=291;QR=56600;RO=1529;RPP=20.3821;RPPR=3288.54;RUN=1;SAF=3;SAP=4.09604;SAR=5;SRF=754;SRP=3.6366;SRR=775;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:24:24:908:0:0:0,-7.22472,-10 0/0:65.0551:9:9:326:0:0:0,-2.70927,-10 0/0:83.1168:15:15:567:0:0:0,-4.51545,-10 0/0:71.0757:11:11:383:0:0:0,-3.31133,-10 0/0:92.1472:18:18:682:0:0:0,-5.41854,-10 0/0:59.0345:7:7:259:0:0:0,-2.10721,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:99:26:26:975:0:0:0,-7.82678,-10 0/0:86.127:16:16:602:0:0:0,-4.81648,-10 0/0:56.0242:6:6:228:0:0:0,-1.80618,-10 0/0:53.0139:5:5:190:0:0:0,-1.50515,-10 0/0:50.0036:4:4:149:0:0:0,-1.20412,-10 0/0:99:43:43:1603:0:0:0,-10,-10 0/0:99:26:26:963:0:0:0,-7.82678,-10 0/0:95.1536:19:19:701:0:0:0,-5.71957,-10 0/0:80.1065:14:14:529:0:0:0,-4.21442,-10 0/0:95.1536:19:19:676:0:0:0,-5.71957,-10 0/0:59.0345:7:7:266:0:0:0,-2.10721,-10 0/0:80.1065:14:14:532:0:0:0,-4.21442,-10 0/0:99:40:40:1484:0:0:0,-10,-10 0/0:77.0962:13:13:462:0:0:0,-3.91339,-10 0/0:99:22:22:834:0:0:0,-6.62266,-10 0/0:50.0036:4:4:151:0:0:0,-1.20412,-10 0/0:95.1536:19:19:710:0:0:0,-5.71957,-10 0/0:83.1168:15:15:552:0:0:0,-4.51545,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:71.0757:11:11:398:0:0:0,-3.31133,-10 0/0:62.0448:8:8:282:0:0:0,-2.40824,-10 0/0:86.127:16:16:608:0:0:0,-4.81648,-10 0/0:99:39:39:1433:0:0:0,-10,-10 0/0:43.983:2:2:76:0:0:0,-0.60206,-7.22 0/0:68.0654:10:10:367:0:0:0,-3.0103,-10 0/0:74.086:12:12:451:0:0:0,-3.61236,-10 0/0:77.0962:13:13:493:0:0:0,-3.91339,-10 0/0:89.1372:17:17:636:0:0:0,-5.11751,-10 0/0:46.9933:3:3:114:0:0:0,-0.90309,-10 0/0:65.0551:9:9:328:0:0:0,-2.70927,-10 0/0:99:21:21:775:0:0:0,-6.32163,-10 0/0:83.1168:15:15:559:0:0:0,-4.51545,-10 0/0:77.0962:13:13:493:0:0:0,-3.91339,-10 0/0:99:33:33:1172:0:0:0,-9.93399,-10 0/0:80.1065:14:14:525:0:0:0,-4.21442,-10 0/0:83.1168:16:15:543:0:0:0,-4.51545,-10 0/0:99:26:26:966:0:0:0,-7.82678,-10 0/0:99:21:21:763:0:0:0,-6.32163,-10 0/0:71.0757:11:11:418:0:0:0,-3.31133,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:68.0654:10:10:377:0:0:0,-3.0103,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:68.0654:10:10:380:0:0:0,-3.0103,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:74.086:12:12:451:0:0:0,-3.61236,-10 0/0:46.9933:3:3:110:0:0:0,-0.90309,-10 0/0:99:31:31:1156:0:0:0,-9.33193,-10 0/0:74.086:13:12:453:0:0:0,-3.61236,-10 0/0:86.127:16:16:586:0:0:0,-4.81648,-10 0/0:68.0654:10:10:378:0:0:0,-3.0103,-10 0/0:74.086:12:12:456:0:0:0,-3.61236,-10 0/0:86.127:16:16:592:0:0:0,-4.81648,-10 0/0:99:30:30:1120:0:0:0,-9.0309,-10 0/0:71.0757:11:11:418:0:0:0,-3.31133,-10 0/0:99:28:28:1039:0:0:0,-8.42884,-10 0/0:86.127:16:16:607:0:0:0,-4.81648,-10 0/0:62.0448:8:8:297:0:0:0,-2.40824,-10 0/0:99:22:22:810:0:0:0,-6.62266,-10 0/0:77.0962:13:13:493:0:0:0,-3.91339,-10 0/0:65.0551:9:9:317:0:0:0,-2.70927,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:59.0345:7:7:264:0:0:0,-2.10721,-10 0/0:99:21:21:707:0:0:0,-6.32163,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/1:99:13:5:190:8:291:-10,0,-10 0/0:98.166:20:20:755:0:0:0,-6.0206,-10 0/0:95.1536:19:19:713:0:0:0,-5.71957,-10 0/0:71.0757:11:11:410:0:0:0,-3.31133,-10 0/0:86.127:16:16:585:0:0:0,-4.81648,-10 0/0:59.0345:7:7:253:0:0:0,-2.10721,-10 0/0:65.0551:9:9:341:0:0:0,-2.70927,-10 0/0:74.086:12:12:443:0:0:0,-3.61236,-10 0/0:99:36:36:1321:0:0:0,-10,-10 0/0:95.1536:19:19:699:0:0:0,-5.71957,-10 0/0:98.166:20:20:737:0:0:0,-6.0206,-10 0/0:99:22:22:834:0:0:0,-6.62266,-10 0/0:62.0448:8:8:294:0:0:0,-2.40824,-10 0/0:65.0551:9:9:335:0:0:0,-2.70927,-10 0/0:80.1065:14:14:519:0:0:0,-4.21442,-10 0/0:74.086:12:12:446:0:0:0,-3.61236,-10 0/0:59.0345:7:7:243:0:0:0,-2.10721,-10 0/0:89.1372:17:17:637:0:0:0,-5.11751,-10 0/0:86.127:17:16:579:0:0:0,-4.81648,-10 0/0:80.1065:14:14:532:0:0:0,-4.21442,-10 scaffold_6 3924662 . T C 437.671 . AB=0.486486;ABP=3.06899;AC=2;AF=0.0108696;AN=184;AO=18;CIGAR=1X;DP=2086;DPB=2086;DPRA=0.812592;EPP=3.49285;EPPR=5.33095;GTI=0;LEN=1;MEANALT=1;MQM=24.0556;MQMR=27.4093;NS=92;NUMALT=1;ODDS=10.697;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=662;QR=75520;RO=2067;RPP=42.0968;RPPR=4482.76;RUN=1;SAF=8;SAP=3.49285;SAR=10;SRF=1011;SRP=5.13765;SRR=1056;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:88.6009:16:16:593:0:0:0,-4.81648,-10 0/0:49.467:3:3:92:0:0:0,-0.90309,-8.58667 0/0:99:20:20:688:0:0:0,-6.0206,-10 0/0:76.5597:12:12:410:0:0:0,-3.61236,-10 0/0:91.6113:17:17:646:0:0:0,-5.11751,-10 0/0:64.5185:8:8:304:0:0:0,-2.40824,-10 0/0:99:52:52:1896:0:0:0,-10,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:85.5903:15:15:526:0:0:0,-4.51545,-10 0/0:52.4773:4:4:145:0:0:0,-1.20412,-10 0/0:61.5082:7:7:266:0:0:0,-2.10721,-10 0/0:61.5082:7:7:266:0:0:0,-2.10721,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:99:38:38:1370:0:0:0,-10,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:99:24:24:820:0:0:0,-7.22472,-10 0/0:99:20:20:756:0:0:0,-6.0206,-10 0/0:73.5494:11:11:410:0:0:0,-3.31133,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:99:49:49:1796:0:0:0,-10,-10 0/0:99:23:23:855:0:0:0,-6.92369,-10 0/0:99:38:38:1399:0:0:0,-10,-10 0/0:64.5185:8:8:291:0:0:0,-2.40824,-10 0/0:99:20:20:720:0:0:0,-6.0206,-10 0/0:99:25:25:928:0:0:0,-7.52575,-10 0/0:99:31:31:1164:0:0:0,-9.33193,-10 0/0:97.632:19:19:688:0:0:0,-5.71957,-10 0/0:97.632:19:19:694:0:0:0,-5.71957,-10 0/0:99:21:21:783:0:0:0,-6.32163,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:55.4876:5:5:183:0:0:0,-1.50515,-10 0/0:46.4567:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:20:20:724:0:0:0,-6.0206,-10 0/0:94.6187:18:18:665:0:0:0,-5.41854,-10 0/0:99:22:22:799:0:0:0,-6.62266,-10 0/0:55.4876:5:5:167:0:0:0,-1.50515,-10 0/0:85.5903:15:15:564:0:0:0,-4.51545,-10 0/0:99:39:39:1447:0:0:0,-10,-10 0/0:85.5903:15:15:564:0:0:0,-4.51545,-10 0/0:99:21:21:774:0:0:0,-6.32163,-10 0/0:99:44:44:1610:0:0:0,-10,-10 0/0:99:25:25:892:0:0:0,-7.52575,-10 0/0:99:27:27:974:0:0:0,-8.12781,-10 0/0:99:36:36:1336:0:0:0,-10,-10 0/0:99:35:35:1269:0:0:0,-10,-10 0/0:70.5391:10:10:368:0:0:0,-3.0103,-10 0/0:99:53:53:1934:0:0:0,-10,-10 0/0:99:34:34:1272:0:0:0,-10,-10 0/0:64.5185:8:8:292:0:0:0,-2.40824,-10 0/0:99:47:47:1650:0:0:0,-10,-10 0/0:67.5288:9:9:328:0:0:0,-2.70927,-10 0/0:99:52:52:1882:0:0:0,-10,-10 0/0:85.5903:15:15:569:0:0:0,-4.51545,-10 0/0:76.5597:12:12:429:0:0:0,-3.61236,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:99:21:21:771:0:0:0,-6.32163,-10 0/0:99:23:23:842:0:0:0,-6.92369,-10 0/0:58.4979:6:6:203:0:0:0,-1.80618,-10 0/0:99:20:20:753:0:0:0,-6.0206,-10 0/0:88.6009:16:16:573:0:0:0,-4.81648,-10 0/0:99:35:35:1267:0:0:0,-10,-10 0/0:91.6113:17:17:620:0:0:0,-5.11751,-10 0/0:99:46:46:1666:0:0:0,-10,-10 0/0:99:25:25:877:0:0:0,-7.52575,-10 0/0:73.5494:11:11:418:0:0:0,-3.31133,-10 0/0:99:34:34:1236:0:0:0,-10,-10 0/0:88.6009:16:16:595:0:0:0,-4.81648,-10 0/0:76.5597:12:12:456:0:0:0,-3.61236,-10 0/0:99:46:46:1672:0:0:0,-10,-10 0/0:85.5903:15:15:563:0:0:0,-4.51545,-10 0/0:97.632:19:19:688:0:0:0,-5.71957,-10 0/0:99:39:39:1438:0:0:0,-10,-10 0/0:99:27:27:1004:0:0:0,-8.12781,-10 0/0:99:21:21:789:0:0:0,-6.32163,-10 0/0:99:45:45:1629:0:0:0,-10,-10 0/0:91.6113:17:17:622:0:0:0,-5.11751,-10 0/0:76.5597:12:12:421:0:0:0,-3.61236,-10 0/0:76.5597:12:12:438:0:0:0,-3.61236,-10 0/0:64.5185:8:8:303:0:0:0,-2.40824,-10 0/0:79.57:13:13:491:0:0:0,-3.91339,-10 0/0:99:38:38:1402:0:0:0,-10,-10 0/0:99:40:40:1416:0:0:0,-10,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/1:99:29:14:520:15:549:-10,0,-10 0/0:99:37:37:1354:0:0:0,-10,-10 0/0:46.4567:2:2:64:0:0:0,-0.60206,-6.08 0/0:64.5185:8:8:294:0:0:0,-2.40824,-10 0/0:88.6009:16:16:580:0:0:0,-4.81648,-10 0/1:62.4863:8:5:190:3:113:-9.88661,0,-10 0/0:99:26:26:983:0:0:0,-7.82678,-10 0/0:82.5803:14:14:471:0:0:0,-4.21442,-10 0/0:99:23:22:801:0:0:0,-6.62266,-10 scaffold_6 3972952 . T G 240.81 . AB=0.526316;ABP=3.12459;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1510;DPB=1510;DPRA=1.60494;EPP=3.20771;EPPR=8.05293;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9987;NS=92;NUMALT=1;ODDS=8.57665;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=391;QR=55112;RO=1499;RPP=26.8965;RPPR=3258.05;RUN=1;SAF=5;SAP=3.20771;SAR=6;SRF=720;SRP=8.05293;SRR=779;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.3751:14:14:517:0:0:0,-4.21442,-10 0/0:55.3133:8:8:290:0:0:0,-2.40824,-10 0/0:79.3957:16:16:589:0:0:0,-4.81648,-10 0/0:70.3648:13:13:478:0:0:0,-3.91339,-10 0/0:70.3648:13:13:480:0:0:0,-3.91339,-10 0/0:40.2618:3:3:92:0:0:0,-0.90309,-8.58667 0/0:99:29:29:1039:0:0:0,-8.72987,-10 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:70.3648:13:13:489:0:0:0,-3.91339,-10 0/0:49.2927:6:6:223:0:0:0,-1.80618,-10 0/0:40.2618:3:3:114:0:0:0,-0.90309,-10 0/0:37.2515:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:99:23:23:857:0:0:0,-6.92369,-10 0/0:94.4469:21:21:766:0:0:0,-6.32163,-10 0/0:99:27:27:1002:0:0:0,-8.12781,-10 0/0:52.303:7:7:262:0:0:0,-2.10721,-10 0/0:99:24:24:862:0:0:0,-7.22472,-10 0/0:99:30:30:1061:0:0:0,-9.0309,-10 0/0:85.4162:18:18:666:0:0:0,-5.41854,-10 0/0:94.4469:21:21:789:0:0:0,-6.32163,-10 0/0:37.2515:2:2:76:0:0:0,-0.60206,-7.22 0/0:79.3957:16:16:577:0:0:0,-4.81648,-10 0/0:97.4569:22:22:833:0:0:0,-6.62266,-10 0/0:91.4353:20:20:717:0:0:0,-6.0206,-10 0/0:82.4058:17:17:578:0:0:0,-5.11751,-10 0/0:64.3442:11:11:403:0:0:0,-3.31133,-10 0/0:82.4058:17:17:638:0:0:0,-5.11751,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:52.303:7:7:266:0:0:0,-2.10721,-10 0/0:40.2618:3:3:113:0:0:0,-0.90309,-10 0/0:82.4058:17:17:624:0:0:0,-5.11751,-10 0/0:64.3442:11:11:378:0:0:0,-3.31133,-10 0/0:73.3751:14:14:500:0:0:0,-4.21442,-10 0/0:43.2721:4:4:150:0:0:0,-1.20412,-10 0/0:67.3545:12:12:453:0:0:0,-3.61236,-10 0/0:99:32:32:1156:0:0:0,-9.63296,-10 0/0:61.3339:10:10:374:0:0:0,-3.0103,-10 0/0:64.3442:11:11:407:0:0:0,-3.31133,-10 0/0:99:34:34:1284:0:0:0,-10,-10 0/0:76.3853:15:15:552:0:0:0,-4.51545,-10 0/0:79.3957:16:16:583:0:0:0,-4.81648,-10 0/0:99:24:24:899:0:0:0,-7.22472,-10 0/0:82.4058:17:17:632:0:0:0,-5.11751,-10 0/0:76.3853:15:15:568:0:0:0,-4.51545,-10 0/0:99:36:36:1351:0:0:0,-10,-10 0/0:88.4258:19:19:720:0:0:0,-5.71957,-10 0/0:64.3442:11:11:418:0:0:0,-3.31133,-10 0/0:99:33:32:1166:1:14:0,-7.01548,-10 0/0:58.3236:9:9:340:0:0:0,-2.70927,-10 0/0:99:25:25:894:0:0:0,-7.52575,-10 0/0:70.3648:13:13:485:0:0:0,-3.91339,-10 0/0:49.2927:6:6:214:0:0:0,-1.80618,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:79.3957:16:16:592:0:0:0,-4.81648,-10 0/0:67.3545:12:12:440:0:0:0,-3.61236,-10 0/0:52.303:7:7:264:0:0:0,-2.10721,-10 0/0:67.3545:12:12:435:0:0:0,-3.61236,-10 0/0:70.3648:13:13:494:0:0:0,-3.91339,-10 0/0:99:25:25:897:0:0:0,-7.52575,-10 0/0:85.4162:18:18:647:0:0:0,-5.41854,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:82.4058:17:17:638:0:0:0,-5.11751,-10 0/0:61.3339:10:10:366:0:0:0,-3.0103,-10 0/0:94.4469:21:21:763:0:0:0,-6.32163,-10 0/0:94.4469:21:21:796:0:0:0,-6.32163,-10 0/0:55.3133:8:8:302:0:0:0,-2.40824,-10 0/0:99:26:26:968:0:0:0,-7.82678,-10 0/0:58.3236:9:9:339:0:0:0,-2.70927,-10 0/0:79.3957:16:16:605:0:0:0,-4.81648,-10 0/0:99:29:29:1045:0:0:0,-8.72987,-10 0/1:99:19:9:339:10:377:-10,0,-10 0/0:64.3442:11:11:417:0:0:0,-3.31133,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:70.3648:13:13:471:0:0:0,-3.91339,-10 0/0:73.3751:14:14:507:0:0:0,-4.21442,-10 0/0:76.3853:15:15:525:0:0:0,-4.51545,-10 0/0:49.2927:6:6:202:0:0:0,-1.80618,-10 0/0:73.3751:14:14:504:0:0:0,-4.21442,-10 0/0:85.4162:18:18:669:0:0:0,-5.41854,-10 0/0:97.4569:22:22:768:0:0:0,-6.62266,-10 0/0:73.3751:14:14:525:0:0:0,-4.21442,-10 0/0:88.4258:19:19:719:0:0:0,-5.71957,-10 0/0:82.4058:17:17:645:0:0:0,-5.11751,-10 0/0:46.2824:5:5:188:0:0:0,-1.50515,-10 0/0:55.3133:8:8:304:0:0:0,-2.40824,-10 0/0:67.3545:12:12:455:0:0:0,-3.61236,-10 0/0:49.2927:6:6:205:0:0:0,-1.80618,-10 0/0:99:25:25:892:0:0:0,-7.52575,-10 0/0:99:27:27:1015:0:0:0,-8.12781,-10 0/0:55.3133:8:8:273:0:0:0,-2.40824,-10 scaffold_6 4309445 . G A 4171.63 . AB=0.262166;ABP=315.978;AC=11;AF=0.0597826;AN=184;AO=168;CIGAR=1X;DP=3962;DPB=3962;DPRA=1.41822;EPP=3.062;EPPR=4.06884;GTI=0;LEN=1;MEANALT=1;MQM=23.9107;MQMR=25.2046;NS=92;NUMALT=1;ODDS=7.6256;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6155;QR=138605;RO=3793;RPP=367.818;RPPR=8239.41;RUN=1;SAF=85;SAP=3.062;SAR=83;SRF=1918;SRP=4.06884;SRR=1875;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:28:27:964:0:0:0,-8.12781,-10 0/0:99:17:17:575:0:0:0,-5.11751,-10 0/0:99:63:63:2344:0:0:0,-10,-10 0/0:99:24:24:910:0:0:0,-7.22472,-10 0/0:99:39:39:1424:0:0:0,-10,-10 0/0:96.0718:16:16:557:0:0:0,-4.81648,-10 0/0:99:90:90:3296:0:0:0,-10,-10 0/0:99:56:56:2007:0:0:0,-10,-10 0/0:99:38:38:1420:0:0:0,-10,-10 0/0:96.0718:16:16:566:0:0:0,-4.81648,-10 0/0:99:18:18:669:0:0:0,-5.41854,-10 0/0:90.0551:14:14:488:0:0:0,-4.21442,-10 0/0:99:58:58:2109:0:0:0,-10,-10 0/0:99:70:70:2587:0:0:0,-10,-10 0/0:99:63:63:2303:0:0:0,-10,-10 0/0:99:56:56:2094:0:0:0,-10,-10 0/0:99:58:57:2108:1:34:0,-10,-10 0/0:81.0253:11:11:394:0:0:0,-3.31133,-10 0/0:99:60:60:2152:0:0:0,-10,-10 0/0:99:72:72:2631:0:0:0,-10,-10 0/0:99:41:41:1441:0:0:0,-10,-10 0/0:99:62:62:2292:0:0:0,-10,-10 0/0:99:18:18:616:0:0:0,-5.41854,-10 0/1:99:42:32:1103:10:372:-10,0,-10 0/0:99:41:41:1517:0:0:0,-10,-10 0/1:99:49:35:1287:14:507:-10,0,-10 0/0:99:34:34:1205:0:0:0,-10,-10 0/0:99:32:32:1155:0:0:0,-9.63296,-10 0/0:99:36:36:1289:0:0:0,-10,-10 0/1:99:73:52:1954:21:749:-10,0,-10 0/0:68.9843:7:7:265:0:0:0,-2.10721,-10 0/0:99:17:17:604:0:0:0,-5.11751,-10 0/0:99:51:51:1865:0:0:0,-10,-10 0/0:96.0718:16:16:606:0:0:0,-4.81648,-10 0/0:99:35:35:1254:0:0:0,-10,-10 0/0:99:17:17:630:0:0:0,-5.11751,-10 0/0:99:26:26:960:0:0:0,-7.82678,-10 0/0:99:61:61:2244:0:0:0,-10,-10 0/0:99:37:37:1360:0:0:0,-10,-10 0/0:99:33:33:1184:0:0:0,-9.93399,-10 0/0:99:70:70:2576:0:0:0,-10,-10 0/0:99:48:48:1771:0:0:0,-10,-10 0/1:99:37:14:508:23:844:-10,0,-10 0/0:99:62:62:2300:0:0:0,-10,-10 0/0:99:49:49:1754:0:0:0,-10,-10 0/1:33.1197:35:31:1141:4:152:-8.24295,0,-10 0/1:99:107:84:2986:23:841:-10,0,-10 0/1:99:60:48:1771:12:437:-10,0,-10 0/0:99:19:19:684:0:0:0,-5.71957,-10 0/0:99:84:84:3018:0:0:0,-10,-10 0/0:99:22:22:787:0:0:0,-6.62266,-10 0/1:99:79:68:2518:11:416:-10,0,-10 0/0:99:41:41:1484:0:0:0,-10,-10 0/1:99:13:4:152:9:332:-10,0,-10 0/1:99:97:79:2925:18:640:-10,0,-10 0/0:99:22:22:827:0:0:0,-6.62266,-10 0/0:99:43:43:1577:0:0:0,-10,-10 0/0:96.0718:16:16:573:0:0:0,-4.81648,-10 0/0:99:53:53:1894:0:0:0,-10,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:99:77:77:2884:0:0:0,-10,-10 0/0:99:43:43:1591:0:0:0,-10,-10 0/0:99:91:91:3281:0:0:0,-10,-10 0/0:99:46:46:1632:0:0:0,-10,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:99:81:81:2964:0:0:0,-10,-10 0/0:99:46:46:1678:0:0:0,-10,-10 0/0:99:17:17:592:0:0:0,-5.11751,-10 0/0:99:64:64:2339:0:0:0,-10,-10 0/0:99:27:27:969:0:0:0,-8.12781,-10 0/0:99:44:44:1598:0:0:0,-10,-10 0/0:99:46:46:1672:0:0:0,-10,-10 0/0:99:35:35:1324:0:0:0,-10,-10 0/0:99:42:42:1571:0:0:0,-10,-10 0/0:99:60:60:2225:0:0:0,-10,-10 0/0:99:36:36:1330:0:0:0,-10,-10 0/0:99:39:39:1421:0:0:0,-10,-10 0/0:99:22:22:806:0:0:0,-6.62266,-10 0/0:96.0718:16:16:575:0:0:0,-4.81648,-10 0/0:99:19:19:663:0:0:0,-5.71957,-10 0/0:99:68:68:2484:0:0:0,-10,-10 0/0:99:63:63:2354:0:0:0,-10,-10 0/0:99:53:53:1999:0:0:0,-10,-10 0/0:99:58:58:2135:0:0:0,-10,-10 0/0:99:72:72:2648:0:0:0,-10,-10 0/0:96.0718:16:16:594:0:0:0,-4.81648,-10 0/1:99:45:23:862:22:831:-10,0,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:75.0049:9:9:342:0:0:0,-2.70927,-10 0/0:99:37:37:1362:0:0:0,-10,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:99:34:34:1231:0:0:0,-10,-10 scaffold_6 4521682 . T C 252.021 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1255;DPB=1255;DPRA=1.35972;EPP=4.51363;EPPR=3.15226;GTI=1;LEN=1;MEANALT=1;MQM=56.3846;MQMR=58.4552;NS=92;NUMALT=1;ODDS=2.32064;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=477;QR=44612;RO=1239;RPP=31.2394;RPPR=2693.46;RUN=1;SAF=8;SAP=4.51363;SAR=5;SRF=615;SRP=3.15226;SRR=624;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.6082:11:11:407:0:0:0,-3.31133,-10 0/0:40.5567:6:6:196:0:0:0,-1.80618,-10 0/0:64.6391:14:14:510:0:0:0,-4.21442,-10 0/0:43.567:7:7:244:0:0:0,-2.10721,-10 0/0:46.5773:8:8:302:0:0:0,-2.40824,-10 0/0:40.5567:6:6:220:0:0:0,-1.80618,-10 0/0:94.7411:24:24:873:0:0:0,-7.22472,-10 0/0:88.7216:22:22:781:0:0:0,-6.62266,-10 0/0:43.567:7:7:241:0:0:0,-2.10721,-10 0/0:25.5052:1:1:37:0:0:0,-0.30103,-3.7 0/0:37.5464:5:5:177:0:0:0,-1.50515,-10 0/0:40.5567:6:6:228:0:0:0,-1.80618,-10 0/0:76.6803:18:18:627:0:0:0,-5.41854,-10 0/0:99:33:33:1108:0:0:0,-9.93399,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:76.6803:18:18:655:0:0:0,-5.41854,-10 0/0:76.6803:19:18:652:0:0:0,-5.41854,-10 0/0:40.5567:6:6:209:0:0:0,-1.80618,-10 0/0:73.67:17:17:585:0:0:0,-5.11751,-10 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:55.6082:11:11:416:0:0:0,-3.31133,-10 0/0:67.6494:15:15:561:0:0:0,-4.51545,-10 0/0:43.567:7:7:265:0:0:0,-2.10721,-10 0/0:55.6082:11:11:409:0:0:0,-3.31133,-10 0/0:55.6082:11:11:415:0:0:0,-3.31133,-10 0/0:73.67:17:17:630:0:0:0,-5.11751,-10 0/0:58.6185:12:12:381:0:0:0,-3.61236,-10 0/0:52.5979:10:10:354:0:0:0,-3.0103,-10 0/0:39.0601:23:22:781:1:38:0,-1.76196,-10 0/0:97.7534:25:25:881:0:0:0,-7.52575,-10 0/0:28.5155:2:2:76:0:0:0,-0.60206,-7.22 0/0:37.5464:5:5:154:0:0:0,-1.50515,-10 0/0:61.6288:13:13:459:0:0:0,-3.91339,-10 0/0:58.6185:12:12:438:0:0:0,-3.61236,-10 0/0:49.5876:9:9:314:0:0:0,-2.70927,-10 0/0:37.5464:5:5:190:0:0:0,-1.50515,-10 0/0:61.6288:13:13:471:0:0:0,-3.91339,-10 0/0:61.6288:13:13:443:0:0:0,-3.91339,-10 0/0:49.5876:9:9:341:0:0:0,-2.70927,-10 0/0:52.5979:10:10:378:0:0:0,-3.0103,-10 0/0:91.7313:23:23:859:0:0:0,-6.92369,-10 0/0:61.6288:13:13:463:0:0:0,-3.91339,-10 0/0:58.6185:12:12:433:0:0:0,-3.61236,-10 0/0:91.7313:23:23:842:0:0:0,-6.92369,-10 0/0:85.7113:21:21:743:0:0:0,-6.32163,-10 0/0:61.6288:13:13:463:0:0:0,-3.91339,-10 0/0:99:34:34:1119:0:0:0,-10,-10 0/0:49.5876:9:9:319:0:0:0,-2.70927,-10 0/0:49.5876:9:9:341:0:0:0,-2.70927,-10 0/0:94.7411:24:24:853:0:0:0,-7.22472,-10 0/0:52.5979:10:10:379:0:0:0,-3.0103,-10 0/0:99:34:34:1225:0:0:0,-10,-10 0/0:58.6185:12:12:416:0:0:0,-3.61236,-10 0/0:28.5155:2:2:76:0:0:0,-0.60206,-7.22 0/0:88.7216:23:22:815:0:0:0,-6.62266,-10 0/0:70.6597:16:16:573:0:0:0,-4.81648,-10 0/0:76.6803:19:18:626:0:0:0,-5.41854,-10 0/0:34.5361:4:4:139:0:0:0,-1.20412,-10 0/0:0.401177:10:9:333:1:31:-1.0897,0,-10 0/0:55.6082:11:11:391:0:0:0,-3.31133,-10 0/0:94.7411:24:24:873:0:0:0,-7.22472,-10 0/0:52.5979:10:10:366:0:0:0,-3.0103,-10 0/0:82.7009:20:20:715:0:0:0,-6.0206,-10 0/0:64.6391:14:14:522:0:0:0,-4.21442,-10 0/0:58.6185:12:12:430:0:0:0,-3.61236,-10 0/0:99:26:26:940:0:0:0,-7.82678,-10 0/0:61.6288:13:13:475:0:0:0,-3.91339,-10 0/0:49.5876:9:9:334:0:0:0,-2.70927,-10 0/0:67.6494:15:15:545:0:0:0,-4.51545,-10 0/0:61.6288:13:13:492:0:0:0,-3.91339,-10 0/0:73.67:17:17:633:0:0:0,-5.11751,-10 0/0:79.6906:19:19:685:0:0:0,-5.71957,-10 0/0:85.7113:21:21:794:0:0:0,-6.32163,-10 0/0:61.6288:13:13:477:0:0:0,-3.91339,-10 0/0:73.67:17:17:595:0:0:0,-5.11751,-10 0/0:43.567:7:7:233:0:0:0,-2.10721,-10 0/0:43.567:7:7:233:0:0:0,-2.10721,-10 0/0:49.5876:9:9:330:0:0:0,-2.70927,-10 0/0:28.5155:2:2:76:0:0:0,-0.60206,-7.22 0/0:43.567:7:7:238:0:0:0,-2.10721,-10 0/1:99:22:11:414:11:408:-10,0,-10 0/0:97.7534:25:25:914:0:0:0,-7.52575,-10 0/0:70.6597:16:16:595:0:0:0,-4.81648,-10 0/0:70.6597:16:16:568:0:0:0,-4.81648,-10 0/0:70.6597:16:16:590:0:0:0,-4.81648,-10 0/0:25.5052:1:1:38:0:0:0,-0.30103,-3.8 0/0:37.5464:5:5:190:0:0:0,-1.50515,-10 0/0:46.5773:8:8:274:0:0:0,-2.40824,-10 0/0:28.5155:2:2:76:0:0:0,-0.60206,-7.22 0/0:46.5773:8:8:292:0:0:0,-2.40824,-10 0/0:70.6597:16:16:592:0:0:0,-4.81648,-10 0/0:40.5567:6:6:221:0:0:0,-1.80618,-10 scaffold_6 4521683 . C T 349.125 . AB=0.444444;ABP=3.9754;AC=2;AF=0.0108696;AN=184;AO=17;CIGAR=1X;DP=1255;DPB=1255;DPRA=1.20536;EPP=13.3567;EPPR=3.22271;GTI=0;LEN=1;MEANALT=1;MQM=55.1176;MQMR=58.4665;NS=92;NUMALT=1;ODDS=6.24175;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=596;QR=44179;RO=1237;RPP=39.9253;RPPR=2689.12;RUN=1;SAF=13;SAP=13.3567;SAR=4;SRF=613;SRP=3.22271;SRR=624;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.2503:11:11:408:0:0:0,-3.31133,-10 0/0:42.1988:6:6:209:0:0:0,-1.80618,-10 0/0:66.2812:14:14:525:0:0:0,-4.21442,-10 0/0:45.2091:7:7:244:0:0:0,-2.10721,-10 0/0:48.2194:8:8:299:0:0:0,-2.40824,-10 0/0:42.1988:6:6:212:0:0:0,-1.80618,-10 0/0:96.3819:24:24:855:0:0:0,-7.22472,-10 0/0:90.3636:22:22:765:0:0:0,-6.62266,-10 0/0:45.2091:7:7:244:0:0:0,-2.10721,-10 0/0:27.1473:1:1:29:0:0:0,-0.30103,-2.9 0/0:39.1885:5:5:166:0:0:0,-1.50515,-10 0/0:42.1988:6:6:228:0:0:0,-1.80618,-10 0/0:78.3224:18:18:622:0:0:0,-5.41854,-10 0/0:99:33:32:1096:0:0:0,-9.63296,-10 0/0:99:27:27:949:0:0:0,-8.12781,-10 0/0:78.3224:18:18:658:0:0:0,-5.41854,-10 0/0:81.3326:19:19:700:0:0:0,-5.71957,-10 0/0:42.1988:6:6:209:0:0:0,-1.80618,-10 0/0:75.3121:17:17:606:0:0:0,-5.11751,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:57.2503:11:11:361:0:0:0,-3.31133,-10 0/0:69.2915:15:15:557:0:0:0,-4.51545,-10 0/0:45.2091:7:7:250:0:0:0,-2.10721,-10 0/0:57.2503:11:11:414:0:0:0,-3.31133,-10 0/0:57.2503:11:11:415:0:0:0,-3.31133,-10 0/0:75.3121:17:17:619:0:0:0,-5.11751,-10 0/0:60.2606:12:12:360:0:0:0,-3.61236,-10 0/0:54.24:10:10:376:0:0:0,-3.0103,-10 0/0:93.3738:23:23:835:0:0:0,-6.92369,-10 0/0:99:25:25:909:0:0:0,-7.52575,-10 0/0:30.1576:2:2:76:0:0:0,-0.60206,-7.22 0/0:39.1885:5:5:172:0:0:0,-1.50515,-10 0/0:63.2709:13:13:456:0:0:0,-3.91339,-10 0/0:60.2606:12:12:454:0:0:0,-3.61236,-10 0/0:51.2297:9:9:332:0:0:0,-2.70927,-10 0/0:39.1885:5:5:181:0:0:0,-1.50515,-10 0/0:63.2709:13:13:474:0:0:0,-3.91339,-10 0/0:42.0307:13:12:407:1:16:0,-1.19945,-10 0/0:51.2297:9:9:334:0:0:0,-2.70927,-10 0/0:54.24:10:10:378:0:0:0,-3.0103,-10 0/0:93.3738:23:23:802:0:0:0,-6.92369,-10 0/0:63.2709:13:13:471:0:0:0,-3.91339,-10 0/0:60.2606:12:12:424:0:0:0,-3.61236,-10 0/0:93.3738:23:23:826:0:0:0,-6.92369,-10 0/0:87.353:21:21:737:0:0:0,-6.32163,-10 0/0:63.2709:13:13:464:0:0:0,-3.91339,-10 0/0:99:34:34:1202:0:0:0,-10,-10 0/0:51.2297:9:9:331:0:0:0,-2.70927,-10 0/0:51.2297:9:9:339:0:0:0,-2.70927,-10 0/0:96.3819:24:24:854:0:0:0,-7.22472,-10 0/0:54.24:10:10:374:0:0:0,-3.0103,-10 0/0:99:34:34:1227:0:0:0,-10,-10 0/0:60.2606:12:12:396:0:0:0,-3.61236,-10 0/0:30.1576:2:2:76:0:0:0,-0.60206,-7.22 0/0:93.3738:23:23:824:0:0:0,-6.92369,-10 0/0:72.3018:16:16:578:0:0:0,-4.81648,-10 0/0:81.3326:19:19:649:0:0:0,-5.71957,-10 0/0:36.1782:4:4:129:0:0:0,-1.20412,-10 0/0:54.24:10:10:347:0:0:0,-3.0103,-10 0/0:57.2503:11:11:406:0:0:0,-3.31133,-10 0/0:96.3819:24:24:856:0:0:0,-7.22472,-10 0/0:54.24:10:10:336:0:0:0,-3.0103,-10 0/0:84.343:20:20:685:0:0:0,-6.0206,-10 0/0:66.2812:14:14:523:0:0:0,-4.21442,-10 0/0:60.2606:12:12:447:0:0:0,-3.61236,-10 0/0:99:26:26:947:0:0:0,-7.82678,-10 0/0:63.2709:13:13:435:0:0:0,-3.91339,-10 0/0:51.2297:9:9:327:0:0:0,-2.70927,-10 0/0:69.2915:15:15:565:0:0:0,-4.51545,-10 0/0:63.2709:13:13:447:0:0:0,-3.91339,-10 0/0:75.3121:17:17:621:0:0:0,-5.11751,-10 0/1:99:19:8:272:11:403:-10,0,-10 0/0:87.353:21:21:786:0:0:0,-6.32163,-10 0/0:63.2709:13:13:470:0:0:0,-3.91339,-10 0/1:99:17:12:430:5:177:-10,0,-10 0/0:45.2091:7:7:226:0:0:0,-2.10721,-10 0/0:45.2091:7:7:214:0:0:0,-2.10721,-10 0/0:51.2297:9:9:306:0:0:0,-2.70927,-10 0/0:30.1576:2:2:76:0:0:0,-0.60206,-7.22 0/0:45.2091:7:7:255:0:0:0,-2.10721,-10 0/0:90.3636:22:22:811:0:0:0,-6.62266,-10 0/0:99:25:25:898:0:0:0,-7.52575,-10 0/0:72.3018:16:16:578:0:0:0,-4.81648,-10 0/0:72.3018:16:16:570:0:0:0,-4.81648,-10 0/0:72.3018:16:16:572:0:0:0,-4.81648,-10 0/0:27.1473:1:1:38:0:0:0,-0.30103,-3.8 0/0:39.1885:5:5:190:0:0:0,-1.50515,-10 0/0:48.2194:8:8:290:0:0:0,-2.40824,-10 0/0:30.1576:2:2:76:0:0:0,-0.60206,-7.22 0/0:48.2194:8:8:273:0:0:0,-2.40824,-10 0/0:72.3018:16:16:548:0:0:0,-4.81648,-10 0/0:42.1988:6:6:206:0:0:0,-1.80618,-10 scaffold_6 4533019 . G T 620.469 . AB=0.657895;ABP=11.239;AC=2;AF=0.0108696;AN=184;AO=26;CIGAR=1X;DP=1594;DPB=1594;DPRA=1.50582;EPP=3.0103;EPPR=4.80509;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9987;NS=92;NUMALT=1;ODDS=4.41626;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=940;QR=57514;RO=1568;RPP=59.4686;RPPR=3407.88;RUN=1;SAF=13;SAP=3.0103;SAR=13;SRF=802;SRP=4.80509;SRR=766;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.419:14:14:512:0:0:0,-4.21442,-10 0/0:40.3572:8:8:255:0:0:0,-2.40824,-10 0/0:64.4396:16:16:603:0:0:0,-4.81648,-10 0/0:40.3572:8:8:296:0:0:0,-2.40824,-10 0/0:70.4602:18:18:659:0:0:0,-5.41854,-10 0/0:31.3263:5:5:183:0:0:0,-1.50515,-10 0/0:99:30:30:1049:0:0:0,-9.0309,-10 0/0:79.4911:21:21:766:0:0:0,-6.32163,-10 0/1:0.00191043:11:0:0:11:417:-10,-3.31133,0 0/0:43.3675:9:9:342:0:0:0,-2.70927,-10 0/0:28.316:4:4:152:0:0:0,-1.20412,-10 0/0:31.3263:5:5:190:0:0:0,-1.50515,-10 0/0:79.4911:21:21:792:0:0:0,-6.32163,-10 0/0:99:34:34:1250:0:0:0,-10,-10 0/0:67.4499:17:17:620:0:0:0,-5.11751,-10 0/0:49.3881:11:11:405:0:0:0,-3.31133,-10 0/0:97.5528:27:27:989:0:0:0,-8.12781,-10 0/0:46.3778:10:10:373:0:0:0,-3.0103,-10 0/0:70.4602:18:18:681:0:0:0,-5.41854,-10 0/0:99:32:32:1202:0:0:0,-9.63296,-10 0/0:73.4704:19:19:689:0:0:0,-5.71957,-10 0/0:91.5323:25:25:914:0:0:0,-7.52575,-10 0/0:37.3469:7:7:265:0:0:0,-2.10721,-10 0/0:76.4807:20:20:760:0:0:0,-6.0206,-10 0/0:70.4602:18:18:680:0:0:0,-5.41854,-10 0/0:91.5323:25:25:861:0:0:0,-7.52575,-10 0/0:64.4396:16:16:562:0:0:0,-4.81648,-10 0/0:40.3572:8:8:300:0:0:0,-2.40824,-10 0/0:64.4396:16:16:607:0:0:0,-4.81648,-10 0/0:99:39:38:1390:1:16:0,-8.54911,-10 0/0:25.3057:3:3:114:0:0:0,-0.90309,-10 0/0:52.3984:12:12:456:0:0:0,-3.61236,-10 0/0:64.4396:16:16:585:0:0:0,-4.81648,-10 0/0:70.4602:18:18:661:0:0:0,-5.41854,-10 0/0:64.4396:16:16:563:0:0:0,-4.81648,-10 0/0:40.3572:8:8:280:0:0:0,-2.40824,-10 0/0:46.3778:10:10:356:0:0:0,-3.0103,-10 0/0:99:32:32:1133:0:0:0,-9.63296,-10 0/0:49.3881:11:11:418:0:0:0,-3.31133,-10 0/0:40.3572:8:8:304:0:0:0,-2.40824,-10 0/0:91.5323:25:25:922:0:0:0,-7.52575,-10 0/0:64.4396:16:16:579:0:0:0,-4.81648,-10 0/0:82.5012:22:22:822:0:0:0,-6.62266,-10 0/0:88.5213:24:24:903:0:0:0,-7.22472,-10 0/1:99:27:13:455:14:507:-10,0,-10 0/0:55.4087:13:13:488:0:0:0,-3.91339,-10 0/0:99:51:51:1802:0:0:0,-10,-10 0/0:99:29:29:1080:0:0:0,-8.72987,-10 0/0:70.4602:18:18:672:0:0:0,-5.41854,-10 0/0:99:48:48:1658:0:0:0,-10,-10 0/0:43.3675:9:9:335:0:0:0,-2.70927,-10 0/0:99:35:35:1285:0:0:0,-10,-10 0/0:52.3984:12:12:442:0:0:0,-3.61236,-10 0/0:34.3366:6:6:215:0:0:0,-1.80618,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:64.4396:16:16:581:0:0:0,-4.81648,-10 0/0:88.5213:24:24:838:0:0:0,-7.22472,-10 0/0:34.3366:6:6:215:0:0:0,-1.80618,-10 0/0:85.5113:23:23:859:0:0:0,-6.92369,-10 0/0:58.419:14:14:520:0:0:0,-4.21442,-10 0/0:91.5323:25:25:907:0:0:0,-7.52575,-10 0/0:79.4911:21:21:796:0:0:0,-6.32163,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:67.4499:17:17:596:0:0:0,-5.11751,-10 0/0:46.3778:10:10:374:0:0:0,-3.0103,-10 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/0:64.4396:16:16:606:0:0:0,-4.81648,-10 0/0:55.4087:13:13:482:0:0:0,-3.91339,-10 0/0:79.4911:21:21:771:0:0:0,-6.32163,-10 0/0:37.3469:7:7:266:0:0:0,-2.10721,-10 0/0:49.3881:11:11:417:0:0:0,-3.31133,-10 0/0:88.5213:24:24:899:0:0:0,-7.22472,-10 0/0:76.4807:20:20:734:0:0:0,-6.0206,-10 0/0:55.4087:13:13:462:0:0:0,-3.91339,-10 0/0:94.5397:26:26:965:0:0:0,-7.82678,-10 0/0:61.4293:15:15:562:0:0:0,-4.51545,-10 0/0:37.3469:7:7:243:0:0:0,-2.10721,-10 0/0:40.3572:8:8:304:0:0:0,-2.40824,-10 0/0:19.2851:1:1:38:0:0:0,-0.30103,-3.8 0/0:52.3984:12:12:442:0:0:0,-3.61236,-10 0/0:99:28:28:1056:0:0:0,-8.42884,-10 0/0:88.5213:24:24:909:0:0:0,-7.22472,-10 0/0:64.4396:16:16:600:0:0:0,-4.81648,-10 0/0:70.4602:18:18:664:0:0:0,-5.41854,-10 0/0:82.5012:22:22:811:0:0:0,-6.62266,-10 0/0:25.3057:3:3:114:0:0:0,-0.90309,-10 0/0:46.3778:10:10:373:0:0:0,-3.0103,-10 0/0:40.3572:8:8:289:0:0:0,-2.40824,-10 0/0:34.3366:6:6:222:0:0:0,-1.80618,-10 0/0:64.4396:16:16:585:0:0:0,-4.81648,-10 0/0:52.3984:12:12:453:0:0:0,-3.61236,-10 0/0:34.3366:6:6:221:0:0:0,-1.80618,-10 scaffold_6 5039975 . A G 1708.21 . AB=0.666667;ABP=15.3153;AC=5;AF=0.0271739;AN=184;AO=67;CIGAR=1X;DP=2491;DPB=2491;DPRA=1.08893;EPP=4.59839;EPPR=5.43661;GTI=3;LEN=1;MEANALT=1.14286;MQM=58.5075;MQMR=59.7318;NS=92;NUMALT=1;ODDS=5.0347;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2339;QR=88054;RO=2420;RPP=57.4916;RPPR=3436.03;RUN=1;SAF=34;SAP=3.04271;SAR=33;SRF=1246;SRP=7.66192;SRR=1174;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:25:25:918:0:0:0,-7.52575,-10 0/0:72.878:16:16:580:0:0:0,-4.81648,-10 0/0:93.9473:23:23:866:0:0:0,-6.92369,-10 0/0:90.9384:22:22:794:0:0:0,-6.62266,-10 0/0:93.9473:23:23:869:0:0:0,-6.92369,-10 0/0:69.8677:15:15:557:0:0:0,-4.51545,-10 0/0:99:43:43:1558:0:0:0,-10,-10 0/0:99:38:38:1358:0:0:0,-10,-10 0/0:72.878:16:16:592:0:0:0,-4.81648,-10 0/1:7.44033e-05:6:0:0:6:180:-10,-1.80618,0 0/0:51.8059:9:9:292:0:0:0,-2.70927,-10 0/0:51.8059:9:9:339:0:0:0,-2.70927,-10 0/0:99:55:54:1973:1:14:0,-10,-10 0/0:99:53:53:1894:0:0:0,-10,-10 0/0:99:43:43:1558:0:0:0,-10,-10 0/0:96.9596:25:24:901:0:0:0,-7.22472,-10 0/1:99:33:17:639:16:600:-10,0,-10 0/0:51.8059:9:9:336:0:0:0,-2.70927,-10 0/0:96.9596:24:24:900:0:0:0,-7.22472,-10 0/0:99:56:56:2028:0:0:0,-10,-10 0/0:90.9384:22:22:785:0:0:0,-6.62266,-10 0/0:99:44:44:1564:0:0:0,-10,-10 0/0:0.0281134:15:14:517:1:38:-0.460641,0,-10 0/0:90.9384:22:22:811:0:0:0,-6.62266,-10 0/0:96.9596:24:24:905:0:0:0,-7.22472,-10 0/0:99:53:53:1885:0:0:0,-10,-10 0/0:81.9089:19:19:678:0:0:0,-5.71957,-10 0/0:81.9089:19:19:697:0:0:0,-5.71957,-10 0/0:99:31:31:1087:0:0:0,-9.33193,-10 0/0:99:53:53:1909:0:0:0,-10,-10 0/0:54.8162:10:10:344:0:0:0,-3.0103,-10 0/0:33.7441:3:3:102:0:0:0,-0.90309,-9.52 0/0:93.9473:23:23:757:0:0:0,-6.92369,-10 0/0:57.8265:11:11:403:0:0:0,-3.31133,-10 0/0:93.9473:23:23:858:0:0:0,-6.92369,-10 0/0:45.7853:7:7:259:0:0:0,-2.10721,-10 0/0:78.8986:18:18:649:0:0:0,-5.41854,-10 0/0:99:35:35:1249:0:0:0,-10,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:90.9384:22:22:799:0:0:0,-6.62266,-10 0/0:99:47:47:1739:0:0:0,-10,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:99:30:30:1067:0:0:0,-9.0309,-10 0/0:99:43:43:1460:0:0:0,-10,-10 0/0:99:32:31:1133:0:0:0,-9.33193,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:99:67:67:2508:0:0:0,-10,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:57.8265:11:11:383:0:0:0,-3.31133,-10 0/0:99:53:52:1854:1:27:0,-10,-10 0/0:63.8471:13:13:472:0:0:0,-3.91339,-10 0/0:99:48:48:1767:0:0:0,-10,-10 0/0:69.8677:15:15:531:0:0:0,-4.51545,-10 0/0:69.8677:15:15:524:0:0:0,-4.51545,-10 0/0:99:47:47:1724:0:0:0,-10,-10 0/1:0.00476438:12:0:0:12:442:-10,-3.61236,0 0/0:90.9384:22:22:823:0:0:0,-6.62266,-10 0/0:60.8368:12:12:447:0:0:0,-3.61236,-10 0/0:78.8986:18:18:653:0:0:0,-5.41854,-10 0/0:60.8368:12:12:440:0:0:0,-3.61236,-10 0/0:99:51:51:1902:0:0:0,-10,-10 0/0:99:28:28:979:0:0:0,-8.42884,-10 0/0:99:52:52:1862:0:0:0,-10,-10 0/0:99:30:30:1078:0:0:0,-9.0309,-10 0/0:69.8677:15:15:559:0:0:0,-4.51545,-10 0/0:99:49:49:1827:0:0:0,-10,-10 1/1:33.4864:31:0:0:30:1038:-10,-9.0309,0 0/0:81.9089:19:19:685:0:0:0,-5.71957,-10 0/0:99:39:39:1452:0:0:0,-10,-10 0/0:87.9294:21:21:757:0:0:0,-6.32163,-10 0/0:75.8883:17:17:644:0:0:0,-5.11751,-10 0/0:99:39:39:1405:0:0:0,-10,-10 0/0:99:35:35:1259:0:0:0,-10,-10 0/0:63.8471:13:13:488:0:0:0,-3.91339,-10 0/0:99:44:43:1594:0:0:0,-10,-10 0/0:78.8986:18:18:670:0:0:0,-5.41854,-10 0/0:93.9473:23:23:848:0:0:0,-6.92369,-10 0/0:87.9294:21:21:716:0:0:0,-6.32163,-10 0/0:42.775:6:6:227:0:0:0,-1.80618,-10 0/0:87.9294:21:21:779:0:0:0,-6.32163,-10 0/0:99:52:52:1915:0:0:0,-10,-10 0/0:99:45:45:1659:0:0:0,-10,-10 0/0:99:32:32:1183:0:0:0,-9.63296,-10 0/0:93.9473:23:23:805:0:0:0,-6.92369,-10 0/0:99:34:34:1271:0:0:0,-10,-10 0/0:54.8162:10:10:370:0:0:0,-3.0103,-10 0/0:87.9294:21:21:770:0:0:0,-6.32163,-10 0/0:60.8368:12:12:439:0:0:0,-3.61236,-10 0/0:48.7956:8:8:289:0:0:0,-2.40824,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:99:29:29:1023:0:0:0,-8.72987,-10 0/0:72.878:16:16:569:0:0:0,-4.81648,-10 scaffold_6 5325707 . C G 1302.74 . AB=0.695652;ABP=18.305;AC=5;AF=0.0271739;AN=184;AO=52;CIGAR=1X;DP=1617;DPB=1617;DPRA=0.93617;EPP=3.17734;EPPR=3.5112;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.977;NS=92;NUMALT=1;ODDS=2.85598;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1893;QR=57720;RO=1565;RPP=115.927;RPPR=3246.82;RUN=1;SAF=25;SAP=3.17734;SAR=27;SRF=774;SRP=3.41129;SRR=791;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.8659:15:15:565:0:0:0,-4.51545,-10 0/0:34.7835:7:7:262:0:0:0,-2.10721,-10 0/0:70.9071:19:19:720:0:0:0,-5.71957,-10 0/0:46.8247:11:11:361:0:0:0,-3.31133,-10 0/0:49.835:12:12:452:0:0:0,-3.61236,-10 0/0:37.7938:8:8:295:0:0:0,-2.40824,-10 0/0:99:35:35:1297:0:0:0,-10,-10 0/0:94.986:27:27:1006:0:0:0,-8.12781,-10 0/0:58.8659:15:15:538:0:0:0,-4.51545,-10 0/0:22.7423:3:3:111:0:0:0,-0.90309,-10 0/0:28.7629:5:5:190:0:0:0,-1.50515,-10 0/0:43.8144:10:10:358:0:0:0,-3.0103,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:94.986:27:27:990:0:0:0,-8.12781,-10 0/0:91.9774:26:26:965:0:0:0,-7.82678,-10 0/0:94.986:27:27:1024:0:0:0,-8.12781,-10 0/0:31.7732:6:6:223:0:0:0,-1.80618,-10 0/0:85.9582:24:24:877:0:0:0,-7.22472,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:61.8762:16:16:599:0:0:0,-4.81648,-10 0/0:88.9688:25:25:949:0:0:0,-7.52575,-10 0/0:34.7835:7:7:265:0:0:0,-2.10721,-10 0/0:64.8865:17:17:610:0:0:0,-5.11751,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/0:97.9928:28:28:1049:0:0:0,-8.42884,-10 0/0:49.835:12:12:452:0:0:0,-3.61236,-10 0/0:55.8556:14:14:511:0:0:0,-4.21442,-10 0/0:82.9481:23:23:851:0:0:0,-6.92369,-10 0/0:99:29:29:1073:0:0:0,-8.72987,-10 0/0:31.7732:6:6:227:0:0:0,-1.80618,-10 0/0:49.835:12:12:431:0:0:0,-3.61236,-10 0/0:55.8556:14:14:520:0:0:0,-4.21442,-10 0/0:61.8762:16:16:606:0:0:0,-4.81648,-10 0/0:64.8865:17:17:621:0:0:0,-5.11751,-10 0/0:28.7629:5:5:190:0:0:0,-1.50515,-10 0/0:46.8247:11:11:408:0:0:0,-3.31133,-10 0/0:76.9277:21:21:758:0:0:0,-6.32163,-10 0/0:43.8144:10:10:347:0:0:0,-3.0103,-10 0/0:64.8865:17:17:642:0:0:0,-5.11751,-10 0/0:99:31:31:1150:0:0:0,-9.33193,-10 0/0:82.9481:23:23:858:0:0:0,-6.92369,-10 0/0:64.8865:17:17:638:0:0:0,-5.11751,-10 0/0:73.9174:20:20:733:0:0:0,-6.0206,-10 0/0:46.8247:11:11:405:0:0:0,-3.31133,-10 0/0:46.8247:11:11:418:0:0:0,-3.31133,-10 0/0:99:39:39:1430:0:0:0,-10,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:61.8762:16:16:598:0:0:0,-4.81648,-10 0/0:99:31:31:1111:0:0:0,-9.33193,-10 0/0:37.7938:8:8:304:0:0:0,-2.40824,-10 0/0:97.9928:28:28:1037:0:0:0,-8.42884,-10 0/0:58.8659:15:15:570:0:0:0,-4.51545,-10 0/0:40.8041:9:9:313:0:0:0,-2.70927,-10 0/0:99:30:30:1048:0:0:0,-9.0309,-10 0/0:46.8247:11:11:411:0:0:0,-3.31133,-10 0/0:88.9688:25:25:889:0:0:0,-7.52575,-10 0/0:31.7732:6:6:206:0:0:0,-1.80618,-10 0/0:34.7835:7:7:266:0:0:0,-2.10721,-10 0/0:37.7938:8:8:299:0:0:0,-2.40824,-10 0/0:88.9688:25:25:937:0:0:0,-7.52575,-10 0/0:52.8453:13:13:484:0:0:0,-3.91339,-10 0/0:99:38:38:1380:0:0:0,-10,-10 0/0:61.8762:16:16:555:0:0:0,-4.81648,-10 0/0:61.8762:16:16:597:0:0:0,-4.81648,-10 0/0:85.9582:24:24:894:0:0:0,-7.22472,-10 0/0:61.8762:16:16:603:0:0:0,-4.81648,-10 0/0:46.8247:11:11:401:0:0:0,-3.31133,-10 0/0:88.9688:25:25:947:0:0:0,-7.52575,-10 0/0:55.8556:14:14:517:0:0:0,-4.21442,-10 0/1:0.03009:11:0:0:11:374:-10,-3.31133,0 0/1:99:17:8:291:9:342:-10,0,-10 1/1:12.7395:20:0:0:20:749:-10,-6.0206,0 0/0:49.835:12:12:449:0:0:0,-3.61236,-10 0/1:99:18:6:203:12:428:-10,0,-10 0/0:58.8659:15:15:561:0:0:0,-4.51545,-10 0/0:46.8247:11:11:395:0:0:0,-3.31133,-10 0/0:79.938:22:22:804:0:0:0,-6.62266,-10 0/0:28.7629:5:5:190:0:0:0,-1.50515,-10 0/0:43.8144:10:10:357:0:0:0,-3.0103,-10 0/0:99:33:33:1202:0:0:0,-9.93399,-10 0/0:91.9774:26:26:964:0:0:0,-7.82678,-10 0/0:43.8144:10:10:365:0:0:0,-3.0103,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:61.8762:16:16:604:0:0:0,-4.81648,-10 0/0:31.7732:6:6:220:0:0:0,-1.80618,-10 0/0:64.8865:17:17:641:0:0:0,-5.11751,-10 0/0:46.8247:11:11:412:0:0:0,-3.31133,-10 0/0:34.7835:7:7:264:0:0:0,-2.10721,-10 0/0:70.9071:19:19:696:0:0:0,-5.71957,-10 0/0:40.8041:9:9:328:0:0:0,-2.70927,-10 0/0:49.835:12:12:455:0:0:0,-3.61236,-10 scaffold_6 5343576 . G A 182.659 . AB=0.529412;ABP=3.13803;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1702;DPB=1702;DPRA=1.67577;EPP=12.6832;EPPR=4.32759;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9674;NS=92;NUMALT=1;ODDS=10.3054;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=61343;RO=1688;RPP=26.8965;RPPR=3505.28;RUN=1;SAF=2;SAP=12.6832;SAR=9;SRF=843;SRP=3.01545;SRR=845;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:71.8489:12:11:405:0:0:0,-3.31133,-10 0/0:53.7871:5:5:167:0:0:0,-1.50515,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:77.8695:13:13:475:0:0:0,-3.91339,-10 0/0:77.8695:13:13:470:0:0:0,-3.91339,-10 0/0:71.8489:11:11:414:0:0:0,-3.31133,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:98.9349:20:20:722:0:0:0,-6.0206,-10 0/0:68.8386:10:10:358:0:0:0,-3.0103,-10 0/0:53.7871:5:5:156:0:0:0,-1.50515,-10 0/0:44.7562:2:2:76:0:0:0,-0.60206,-7.22 0/0:53.7871:5:5:188:0:0:0,-1.50515,-10 0/0:99:27:27:955:0:0:0,-8.12781,-10 0/0:99:43:43:1554:0:0:0,-10,-10 0/0:99:37:37:1345:0:0:0,-10,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:92.9213:18:18:662:0:0:0,-5.41854,-10 0/0:71.8489:12:11:418:0:0:0,-3.31133,-10 0/0:94.5729:31:30:1082:1:27:0,-5.14057,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:98.9349:20:20:690:0:0:0,-6.0206,-10 0/0:99:27:27:991:0:0:0,-8.12781,-10 0/0:50.7768:4:4:152:0:0:0,-1.20412,-10 0/0:95.9279:19:19:706:0:0:0,-5.71957,-10 0/0:89.9099:17:17:643:0:0:0,-5.11751,-10 0/0:99:23:23:831:0:0:0,-6.92369,-10 0/0:83.8901:15:15:499:0:0:0,-4.51545,-10 0/0:68.8386:10:10:375:0:0:0,-3.0103,-10 0/0:80.8797:14:14:528:0:0:0,-4.21442,-10 0/0:99:32:32:1130:0:0:0,-9.63296,-10 0/0:71.8489:11:11:416:0:0:0,-3.31133,-10 0/0:65.8283:9:9:296:0:0:0,-2.70927,-10 0/0:89.9099:17:17:596:0:0:0,-5.11751,-10 0/0:65.8283:9:9:317:0:0:0,-2.70927,-10 0/0:80.8797:14:14:520:0:0:0,-4.21442,-10 0/0:53.7871:5:5:184:0:0:0,-1.50515,-10 0/0:80.8797:14:14:527:0:0:0,-4.21442,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:99:23:23:857:0:0:0,-6.92369,-10 0/0:80.8797:14:14:517:0:0:0,-4.21442,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:99:21:21:749:0:0:0,-6.32163,-10 0/0:59.8077:7:7:260:0:0:0,-2.10721,-10 0/0:99:32:32:1069:0:0:0,-9.63296,-10 0/0:83.8901:15:15:551:0:0:0,-4.51545,-10 0/0:86.9005:16:16:581:0:0:0,-4.81648,-10 0/0:99:39:39:1444:0:0:0,-10,-10 0/0:99:23:22:802:0:0:0,-6.62266,-10 0/0:86.9005:16:16:582:0:0:0,-4.81648,-10 0/0:99:40:40:1486:0:0:0,-10,-10 0/0:89.9099:17:17:622:0:0:0,-5.11751,-10 0/0:99:43:42:1523:1:16:0,-9.71082,-10 0/0:77.8695:13:13:452:0:0:0,-3.91339,-10 0/0:56.7974:6:6:228:0:0:0,-1.80618,-10 0/0:99:33:33:1152:0:0:0,-9.93399,-10 0/0:74.8592:12:12:415:0:0:0,-3.61236,-10 0/0:68.8386:10:10:370:0:0:0,-3.0103,-10 0/0:59.8077:7:7:263:0:0:0,-2.10721,-10 0/0:86.9005:16:16:600:0:0:0,-4.81648,-10 0/0:62.818:8:8:299:0:0:0,-2.40824,-10 0/0:99:26:26:942:0:0:0,-7.82678,-10 0/0:86.9005:16:16:604:0:0:0,-4.81648,-10 0/0:99:50:50:1850:0:0:0,-10,-10 0/1:99:17:8:279:9:320:-10,0,-10 0/0:80.8797:14:14:502:0:0:0,-4.21442,-10 0/0:99:30:30:1008:0:0:0,-9.0309,-10 0/0:95.9279:19:19:692:0:0:0,-5.71957,-10 0/0:56.7974:6:6:226:0:0:0,-1.80618,-10 0/0:99:28:28:972:0:0:0,-8.42884,-10 0/0:53.7871:5:5:167:0:0:0,-1.50515,-10 0/0:83.8901:15:15:533:0:0:0,-4.51545,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 0/0:99:24:24:814:0:0:0,-7.22472,-10 0/0:77.8695:13:13:489:0:0:0,-3.91339,-10 0/0:99:36:36:1325:0:0:0,-10,-10 0/0:80.8797:14:14:525:0:0:0,-4.21442,-10 0/0:77.8695:13:13:469:0:0:0,-3.91339,-10 0/0:71.8489:11:11:405:0:0:0,-3.31133,-10 0/0:59.8077:7:7:262:0:0:0,-2.10721,-10 0/0:65.8283:9:9:318:0:0:0,-2.70927,-10 0/0:99:31:31:1174:0:0:0,-9.33193,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:99:27:27:971:0:0:0,-8.12781,-10 0/0:99:22:22:830:0:0:0,-6.62266,-10 0/0:99:21:21:792:0:0:0,-6.32163,-10 0/0:56.7974:6:6:227:0:0:0,-1.80618,-10 0/0:71.8489:11:11:411:0:0:0,-3.31133,-10 0/0:86.9005:16:16:562:0:0:0,-4.81648,-10 0/0:59.8077:7:7:265:0:0:0,-2.10721,-10 0/0:98.9349:20:20:751:0:0:0,-6.0206,-10 0/0:89.9099:17:17:599:0:0:0,-5.11751,-10 0/0:92.9213:18:18:667:0:0:0,-5.41854,-10 scaffold_6 5704902 . T C 2518.66 . AB=0;ABP=0;AC=10;AF=0.0543478;AN=184;AO=98;CIGAR=1X;DP=1762;DPB=1762;DPRA=0.935913;EPP=3.09893;EPPR=23.4127;GTI=1;LEN=1;MEANALT=1;MQM=59.6939;MQMR=59.9417;NS=92;NUMALT=1;ODDS=9.63656;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3499;QR=61144;RO=1663;RPP=182.489;RPPR=2617.43;RUN=1;SAF=46;SAP=3.80798;SAR=52;SRF=878;SRP=14.3038;SRR=785;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:17:17:613:0:0:0,-5.11751,-10 0/0:92.5934:8:8:279:0:0:0,-2.40824,-10 0/0:99:21:21:762:0:0:0,-6.32163,-10 0/0:86.5729:6:6:205:0:0:0,-1.80618,-10 0/0:1.07227e-05:11:10:342:1:38:-1.53006,0,-10 0/0:98.6131:10:10:378:0:0:0,-3.0103,-10 0/0:99:40:40:1504:0:0:0,-10,-10 0/0:99:23:23:868:0:0:0,-6.92369,-10 0/0:98.6131:10:10:360:0:0:0,-3.0103,-10 0/0:83.5627:5:5:188:0:0:0,-1.50515,-10 0/0:83.5627:5:5:181:0:0:0,-1.50515,-10 0/0:95.6034:9:9:331:0:0:0,-2.70927,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:99:14:14:532:0:0:0,-4.21442,-10 0/0:99:30:30:1134:0:0:0,-9.0309,-10 0/0:99:20:20:741:0:0:0,-6.0206,-10 0/0:95.6034:9:9:342:0:0:0,-2.70927,-10 0/0:99:23:23:846:0:0:0,-6.92369,-10 0/0:99:37:37:1332:0:0:0,-10,-10 0/0:99:11:11:404:0:0:0,-3.31133,-10 0/0:99:31:31:1177:0:0:0,-9.33193,-10 0/0:86.5729:6:6:220:0:0:0,-1.80618,-10 0/0:99:22:22:811:0:0:0,-6.62266,-10 0/0:99:18:18:672:0:0:0,-5.41854,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:99:13:13:486:0:0:0,-3.91339,-10 0/0:99:16:16:536:0:0:0,-4.81648,-10 0/0:99:23:23:837:0:0:0,-6.92369,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:74.5319:2:2:76:0:0:0,-0.60206,-7.22 0/0:92.5934:8:8:303:0:0:0,-2.40824,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:89.5833:7:7:243:0:0:0,-2.10721,-10 0/0:99:14:14:508:0:0:0,-4.21442,-10 0/0:98.6131:10:10:369:0:0:0,-3.0103,-10 0/0:98.6131:10:10:367:0:0:0,-3.0103,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:99:22:22:782:0:0:0,-6.62266,-10 0/0:99:16:16:608:0:0:0,-4.81648,-10 0/0:99:24:24:852:0:0:0,-7.22472,-10 0/0:99:16:16:602:0:0:0,-4.81648,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:99:35:35:1238:0:0:0,-10,-10 0/0:99:32:32:1172:0:0:0,-9.63296,-10 0/0:99:21:21:765:0:0:0,-6.32163,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:99:25:25:941:0:0:0,-7.52575,-10 0/0:99:11:11:405:0:0:0,-3.31133,-10 0/0:99:37:37:1329:0:0:0,-10,-10 0/0:98.6131:10:10:365:0:0:0,-3.0103,-10 0/0:99:40:40:1504:0:0:0,-10,-10 0/0:99:17:17:622:0:0:0,-5.11751,-10 0/0:80.5525:4:4:147:0:0:0,-1.20412,-10 0/0:99:53:53:1896:0:0:0,-10,-10 0/0:99:18:18:647:0:0:0,-5.41854,-10 0/0:99:19:19:713:0:0:0,-5.71957,-10 0/0:86.5729:6:6:228:0:0:0,-1.80618,-10 0/0:99:22:22:822:0:0:0,-6.62266,-10 0/0:92.5934:8:8:303:0:0:0,-2.40824,-10 0/0:99:30:30:1137:0:0:0,-9.0309,-10 0/0:99:22:22:801:0:0:0,-6.62266,-10 0/0:99:36:36:1321:0:0:0,-10,-10 0/0:99:16:16:604:0:0:0,-4.81648,-10 0/0:99:16:16:579:0:0:0,-4.81648,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:99:16:16:560:0:0:0,-4.81648,-10 0/0:99:14:14:496:0:0:0,-4.21442,-10 0/0:99:45:45:1637:0:0:0,-10,-10 0/0:99:12:12:433:0:0:0,-3.61236,-10 1/1:74.9647:22:0:0:22:794:-10,-6.62266,0 1/1:93.0261:28:0:0:28:1053:-10,-8.42884,0 1/1:41.8514:11:0:0:11:385:-10,-3.31133,0 1/1:47.872:13:0:0:13:445:-10,-3.91339,0 1/1:77.975:23:0:0:23:784:-10,-6.92369,0 0/0:99:13:12:455:0:0:0,-3.61236,-10 0/0:99:16:16:569:0:0:0,-4.81648,-10 0/0:95.6034:9:9:333:0:0:0,-2.70927,-10 0/0:83.5627:5:5:190:0:0:0,-1.50515,-10 0/0:99:13:13:491:0:0:0,-3.91339,-10 0/0:99:35:35:1317:0:0:0,-10,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:99:17:17:635:0:0:0,-5.11751,-10 0/0:99:22:22:794:0:0:0,-6.62266,-10 0/0:99:35:35:1318:0:0:0,-10,-10 0/0:74.5319:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:20:20:740:0:0:0,-6.0206,-10 0/0:92.5934:8:8:293:0:0:0,-2.40824,-10 0/0:83.5627:5:5:157:0:0:0,-1.50515,-10 0/0:99:13:13:484:0:0:0,-3.91339,-10 0/0:99:14:14:528:0:0:0,-4.21442,-10 0/0:99:14:14:505:0:0:0,-4.21442,-10 scaffold_6 5705126 . A T 67645.9 . AB=0.443878;ABP=8.37251;AC=172;AF=0.934783;AN=184;AO=2247;CIGAR=1X;DP=2438;DPB=2438;DPRA=1.23829;EPP=9.99245;EPPR=3.29753;GTI=1;LEN=1;MEANALT=1.02273;MQM=59.8941;MQMR=59.9947;NS=92;NUMALT=1;ODDS=0.760982;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=82600;QR=6869;RO=189;RPP=4778.63;RPPR=396.231;RUN=1;SAF=1154;SAP=6.60623;SAR=1093;SRF=90;SRP=3.94093;SRR=99;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:59.3378:17:0:0:17:614:-10,-5.11751,0 1/1:41.276:11:0:0:11:393:-10,-3.31133,0 1/1:99:38:0:0:38:1417:-10,-10,0 1/1:59.3378:17:0:0:17:611:-10,-5.11751,0 1/1:89.4404:27:0:0:27:991:-10,-8.12781,0 1/1:38.2657:10:0:0:10:336:-10,-3.0103,0 1/1:99:45:0:0:45:1663:-10,-10,0 1/1:99:38:0:0:38:1432:-10,-10,0 0/0:30.9136:18:18:678:0:0:0,-5.41854,-10 1/1:44.2863:12:0:0:12:453:-10,-3.61236,0 1/1:38.2657:10:0:0:10:380:-10,-3.0103,0 1/1:29.2348:7:0:0:7:242:-10,-2.10721,0 1/1:99:37:0:0:36:1239:-10,-10,0 1/1:99:49:1:16:48:1746:-10,-10,0 0/1:99:48:29:1060:19:715:-10,0,-10 1/1:95.4597:29:0:0:29:1081:-10,-8.72987,0 1/1:99:32:0:0:32:1146:-10,-9.63296,0 1/1:29.2348:7:0:0:7:266:-10,-2.10721,0 0/1:99:29:14:522:15:563:-10,0,-10 1/1:46.726:36:1:38:35:1261:-10,-5.48078,0 1/1:71.379:21:0:0:21:769:-10,-6.32163,0 1/1:99:35:0:0:35:1317:-10,-10,0 1/1:47.2966:13:0:0:13:465:-10,-3.91339,0 1/1:95.4597:29:0:0:29:1080:-10,-8.72987,0 1/1:99:31:0:0:31:1168:-10,-9.33193,0 1/1:99:38:0:0:38:1424:-10,-10,0 1/1:65.3584:19:0:0:19:655:-10,-5.71957,0 1/1:62.3481:18:0:0:18:646:-10,-5.41854,0 1/1:71.379:21:0:0:21:787:-10,-6.32163,0 1/1:99:48:0:0:48:1789:-10,-10,0 1/1:32.2451:8:0:0:8:273:-10,-2.40824,0 1/1:41.276:11:0:0:11:416:-10,-3.31133,0 1/1:56.3275:16:0:0:16:585:-10,-4.81648,0 1/1:80.4099:24:0:0:24:912:-10,-7.22472,0 1/1:77.3996:23:0:0:23:850:-10,-6.92369,0 1/1:38.2657:10:0:0:10:380:-10,-3.0103,0 1/1:47.2966:13:0:0:13:492:-10,-3.91339,0 1/1:99:36:0:0:36:1355:-10,-10,0 1/1:83.4201:25:0:0:25:900:-10,-7.52575,0 1/1:50.3069:14:0:0:14:532:-10,-4.21442,0 1/1:99:35:0:0:35:1239:-10,-10,0 1/1:77.3996:23:0:0:23:863:-10,-6.92369,0 1/1:77.3996:23:0:0:23:811:-10,-6.92369,0 1/1:77.3996:23:0:0:23:859:-10,-6.92369,0 1/1:74.3893:22:0:0:22:817:-10,-6.62266,0 1/1:65.3584:19:0:0:19:675:-10,-5.71957,0 1/1:99:87:0:0:87:3266:-10,-10,0 1/1:99:39:0:0:39:1424:-10,-10,0 1/1:80.4099:24:0:0:24:865:-10,-7.22472,0 1/1:99:41:0:0:41:1496:-10,-10,0 1/1:89.4404:27:0:0:27:993:-10,-8.12781,0 1/1:99:49:0:0:49:1748:-10,-10,0 1/1:65.3584:19:0:0:19:699:-10,-5.71957,0 1/1:29.2348:7:0:0:7:257:-10,-2.10721,0 1/1:99:41:1:16:40:1513:-10,-9.12945,0 1/1:50.3069:14:0:0:14:511:-10,-4.21442,0 1/1:99:43:0:0:43:1549:-10,-10,0 1/1:47.2966:13:0:0:13:477:-10,-3.91339,0 1/1:68.3687:20:0:0:20:749:-10,-6.0206,0 1/1:56.3275:16:0:0:16:596:-10,-4.81648,0 1/1:99:41:0:0:41:1505:-10,-10,0 0/0:51.9857:25:25:930:0:0:0,-7.52575,-10 1/1:99:48:0:0:48:1773:-10,-10,0 1/1:68.3687:21:0:0:20:759:-10,-6.0206,0 0/0:42.9548:22:22:799:0:0:0,-6.62266,-10 1/1:99:51:0:0:51:1885:-10,-10,0 1/1:83.4201:25:0:0:25:925:-10,-7.52575,0 1/1:80.4099:24:0:0:24:867:-10,-7.22472,0 0/1:99:38:20:729:18:653:-10,0,-10 1/1:62.3481:18:0:0:18:633:-10,-5.41854,0 1/1:99:32:0:0:32:1199:-10,-9.63296,0 1/1:99:46:0:0:46:1680:-10,-10,0 1/1:98.4683:30:0:0:30:1084:-10,-9.0309,0 1/1:83.4201:25:0:0:25:926:-10,-7.52575,0 1/1:86.4303:26:0:0:26:968:-10,-7.82678,0 1/1:59.3378:17:0:0:17:645:-10,-5.11751,0 1/1:65.3584:19:0:0:19:705:-10,-5.71957,0 1/1:65.3584:19:0:0:19:681:-10,-5.71957,0 1/1:35.2554:9:0:0:9:337:-10,-2.70927,0 1/1:71.379:21:0:0:21:738:-10,-6.32163,0 1/1:99:37:0:0:37:1353:-10,-10,0 0/1:99:48:29:1031:19:700:-10,0,-10 1/1:92.4503:28:0:0:28:1038:-10,-8.42884,0 1/1:86.4303:26:0:0:26:939:-10,-7.82678,0 1/1:99:36:0:0:36:1344:-10,-10,0 1/1:47.2966:13:0:0:13:479:-10,-3.91339,0 1/1:89.4404:27:0:0:27:1010:-10,-8.12781,0 1/1:77.3996:23:0:0:23:844:-10,-6.92369,0 0/1:1.65256:12:12:431:0:0:0,-3.61236,-10 1/1:83.4201:25:0:0:25:942:-10,-7.52575,0 0/1:99:33:17:619:16:576:-10,0,-10 1/1:62.3481:18:0:0:18:661:-10,-5.41854,0 scaffold_6 5705148 . C T 500.158 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=22;CIGAR=1X;DP=2438;DPB=2438;DPRA=1.17891;EPP=6.56362;EPPR=5.08111;GTI=0;LEN=1;MEANALT=1;MQM=54.6818;MQMR=59.9491;NS=92;NUMALT=1;ODDS=10.8287;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=756;QR=87932;RO=2416;RPP=50.7827;RPPR=5249.29;RUN=1;SAF=14;SAP=6.56362;SAR=8;SRF=1232;SRP=5.08111;SRR=1184;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:77.132:17:17:637:0:0:0,-5.11751,-10 0/0:59.0702:11:11:400:0:0:0,-3.31133,-10 0/0:99:38:38:1405:0:0:0,-10,-10 0/0:77.132:17:17:618:0:0:0,-5.11751,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:56.0599:10:10:377:0:0:0,-3.0103,-10 0/0:99:45:45:1666:0:0:0,-10,-10 0/1:99:38:19:721:19:708:-10,0,-10 0/0:80.1423:18:18:668:0:0:0,-5.41854,-10 0/0:62.0805:12:12:441:0:0:0,-3.61236,-10 0/0:56.0599:10:10:370:0:0:0,-3.0103,-10 0/0:47.029:7:7:258:0:0:0,-2.10721,-10 0/0:99:37:37:1320:0:0:0,-10,-10 0/0:99:49:49:1780:0:0:0,-10,-10 0/0:99:48:48:1745:0:0:0,-10,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:99:32:32:1150:0:0:0,-9.63296,-10 0/0:47.029:7:7:264:0:0:0,-2.10721,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:99:35:34:1196:1:16:0,-7.39198,-10 0/0:89.173:21:21:769:0:0:0,-6.32163,-10 0/0:99:35:35:1287:0:0:0,-10,-10 0/0:65.0908:13:13:470:0:0:0,-3.91339,-10 0/0:99:29:29:990:0:0:0,-8.72987,-10 0/0:99:31:31:1133:0:0:0,-9.33193,-10 0/0:99:38:38:1407:0:0:0,-10,-10 0/0:83.1525:19:19:685:0:0:0,-5.71957,-10 0/0:80.1423:18:18:678:0:0:0,-5.41854,-10 0/0:89.173:21:21:775:0:0:0,-6.32163,-10 0/0:99:48:48:1770:0:0:0,-10,-10 0/0:50.0393:8:8:267:0:0:0,-2.40824,-10 0/0:59.0702:11:11:386:0:0:0,-3.31133,-10 0/0:74.1217:16:16:587:0:0:0,-4.81648,-10 0/0:98.1963:24:24:906:0:0:0,-7.22472,-10 0/0:95.1899:23:23:807:0:0:0,-6.92369,-10 0/0:56.0599:10:10:379:0:0:0,-3.0103,-10 0/0:65.0908:13:13:492:0:0:0,-3.91339,-10 0/0:99:36:36:1350:0:0:0,-10,-10 0/0:99:25:25:898:0:0:0,-7.52575,-10 0/0:68.1011:14:14:501:0:0:0,-4.21442,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:95.1899:23:23:866:0:0:0,-6.92369,-10 0/0:68.9518:23:22:810:1:16:0,-3.96196,-10 0/0:95.1899:23:23:848:0:0:0,-6.92369,-10 0/0:92.1815:22:22:780:0:0:0,-6.62266,-10 0/0:83.1525:19:19:692:0:0:0,-5.71957,-10 0/0:99:87:87:3190:0:0:0,-10,-10 0/0:99:39:39:1455:0:0:0,-10,-10 0/0:98.1963:24:24:869:0:0:0,-7.22472,-10 0/0:99:41:41:1464:0:0:0,-10,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 0/0:99:49:49:1791:0:0:0,-10,-10 0/0:83.1525:19:19:679:0:0:0,-5.71957,-10 0/0:47.029:7:7:266:0:0:0,-2.10721,-10 0/0:99:42:42:1501:0:0:0,-10,-10 0/0:68.1011:14:14:521:0:0:0,-4.21442,-10 0/0:99:43:43:1542:0:0:0,-10,-10 0/0:65.0908:13:13:482:0:0:0,-3.91339,-10 0/0:86.1628:20:20:704:0:0:0,-6.0206,-10 0/0:74.1217:16:16:578:0:0:0,-4.81648,-10 0/0:99:41:41:1499:0:0:0,-10,-10 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:99:48:48:1754:0:0:0,-10,-10 0/0:89.173:21:21:762:0:0:0,-6.32163,-10 0/0:92.1815:22:22:811:0:0:0,-6.62266,-10 0/0:99:51:51:1866:0:0:0,-10,-10 0/0:99:25:25:902:0:0:0,-7.52575,-10 0/0:98.1963:24:24:847:0:0:0,-7.22472,-10 0/0:99:38:38:1345:0:0:0,-10,-10 0/0:80.1423:18:18:653:0:0:0,-5.41854,-10 0/0:99:32:32:1161:0:0:0,-9.63296,-10 0/0:99:46:46:1654:0:0:0,-10,-10 0/0:99:30:30:1070:0:0:0,-9.0309,-10 0/0:99:25:25:928:0:0:0,-7.52575,-10 0/0:99:26:26:917:0:0:0,-7.82678,-10 0/0:77.132:17:17:611:0:0:0,-5.11751,-10 0/0:83.1525:19:19:691:0:0:0,-5.71957,-10 0/0:83.1525:19:19:682:0:0:0,-5.71957,-10 0/0:53.0496:9:9:307:0:0:0,-2.70927,-10 0/0:89.173:21:21:693:0:0:0,-6.32163,-10 0/0:99:37:37:1317:0:0:0,-10,-10 0/0:99:48:48:1763:0:0:0,-10,-10 0/0:83.149:28:27:1017:1:16:0,-5.38168,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:99:36:36:1299:0:0:0,-10,-10 0/0:65.0908:13:13:489:0:0:0,-3.91339,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:95.1899:23:23:837:0:0:0,-6.92369,-10 0/0:62.0805:12:12:428:0:0:0,-3.61236,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:80.1423:18:18:660:0:0:0,-5.41854,-10 scaffold_6 5817132 . G A 3031.4 . AB=0.547826;ABP=5.29507;AC=13;AF=0.0706522;AN=184;AO=119;CIGAR=1X;DP=1314;DPB=1314;DPRA=1.29697;EPP=8.28388;EPPR=3.89053;GTI=1;LEN=1;MEANALT=1.08333;MQM=59.7311;MQMR=59.9707;NS=92;NUMALT=1;ODDS=1.42915;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4274;QR=43508;RO=1194;RPP=261.416;RPPR=2595.75;RUN=1;SAF=51;SAP=8.28388;SAR=68;SRF=586;SRP=3.89053;SRR=608;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.6527:17:17:615:0:0:0,-5.11751,-10 0/0:36.5806:10:10:361:0:0:0,-3.0103,-10 0/0:63.6733:19:19:711:0:0:0,-5.71957,-10 0/0:21.5291:5:5:189:0:0:0,-1.50515,-10 0/0:33.5703:9:9:337:0:0:0,-2.70927,-10 0/0:18.5188:4:4:152:0:0:0,-1.20412,-10 0/0:75.7145:23:23:844:0:0:0,-6.92369,-10 1/1:34.2347:21:0:0:20:736:-10,-6.0206,0 0/0:39.5909:11:11:418:0:0:0,-3.31133,-10 0/0:15.5085:3:3:108:0:0:0,-0.90309,-10 0/0:18.5188:4:4:130:0:0:0,-1.20412,-10 0/0:9.48793:1:1:38:0:0:0,-0.30103,-3.8 0/1:99:17:9:341:8:303:-10,0,-10 0/0:99:34:34:1228:0:0:0,-10,-10 0/1:99:18:10:365:8:300:-10,0,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:60.663:18:18:612:0:0:0,-5.41854,-10 0/0:51.6321:15:15:529:0:0:0,-4.51545,-10 0/1:99:17:9:314:8:291:-10,0,-10 0/0:99:37:37:1318:0:0:0,-10,-10 0/1:99:16:9:309:7:262:-10,0,-10 0/0:66.6836:20:20:731:0:0:0,-6.0206,-10 0/0:30.56:8:8:290:0:0:0,-2.40824,-10 0/1:99:15:4:152:11:395:-10,0,-10 0/0:66.6836:20:20:753:0:0:0,-6.0206,-10 0/0:66.6836:20:20:729:0:0:0,-6.0206,-10 0/0:39.5909:11:11:412:0:0:0,-3.31133,-10 0/1:0.322993:8:0:0:8:294:-10,-2.40824,0 0/0:30.56:8:8:276:0:0:0,-2.40824,-10 0/0:60.663:18:18:660:0:0:0,-5.41854,-10 0/0:24.5394:6:6:206:0:0:0,-1.80618,-10 0/0:15.5085:3:3:113:0:0:0,-0.90309,-10 0/0:33.5703:9:9:331:0:0:0,-2.70927,-10 0/0:51.6321:15:15:539:0:0:0,-4.51545,-10 0/0:48.6218:14:14:514:0:0:0,-4.21442,-10 0/0:18.5188:4:4:130:0:0:0,-1.20412,-10 0/0:33.5703:9:9:342:0:0:0,-2.70927,-10 0/0:99:31:31:1163:0:0:0,-9.33193,-10 0/0:39.5909:11:11:372:0:0:0,-3.31133,-10 0/0:42.6012:12:12:435:0:0:0,-3.61236,-10 0/0:60.663:18:18:656:0:0:0,-5.41854,-10 0/0:66.6836:20:20:736:0:0:0,-6.0206,-10 0/0:30.56:8:8:272:0:0:0,-2.40824,-10 0/0:72.7042:22:22:806:0:0:0,-6.62266,-10 0/0:81.7351:25:25:914:0:0:0,-7.52575,-10 0/0:39.5909:11:11:409:0:0:0,-3.31133,-10 0/0:66.6836:20:20:729:0:0:0,-6.0206,-10 0/0:42.6012:12:12:447:0:0:0,-3.61236,-10 0/0:51.6321:15:15:545:0:0:0,-4.51545,-10 0/0:87.7555:27:27:979:0:0:0,-8.12781,-10 0/0:33.5703:9:9:325:0:0:0,-2.70927,-10 0/0:48.6218:14:14:532:0:0:0,-4.21442,-10 0/0:24.5394:6:6:228:0:0:0,-1.80618,-10 0/0:15.5085:3:3:110:0:0:0,-0.90309,-10 0/0:65.1356:28:27:972:1:16:0,-5.38168,-10 0/0:24.5394:6:6:216:0:0:0,-1.80618,-10 0/0:36.5806:10:10:375:0:0:0,-3.0103,-10 0/0:24.5394:6:6:216:0:0:0,-1.80618,-10 0/0:72.7042:22:22:810:0:0:0,-6.62266,-10 0/0:33.5703:9:9:315:0:0:0,-2.70927,-10 0/0:45.6115:13:13:486:0:0:0,-3.91339,-10 0/0:48.6218:14:14:496:0:0:0,-4.21442,-10 0/0:66.6836:20:20:752:0:0:0,-6.0206,-10 0/0:51.6321:15:15:545:0:0:0,-4.51545,-10 0/0:39.5909:11:11:394:0:0:0,-3.31133,-10 0/0:69.6939:21:21:733:0:0:0,-6.32163,-10 0/0:36.5806:10:10:369:0:0:0,-3.0103,-10 0/0:39.5909:11:11:394:0:0:0,-3.31133,-10 0/0:99:33:33:1184:0:0:0,-9.93399,-10 0/0:30.56:8:8:293:0:0:0,-2.40824,-10 0/0:60.663:18:18:669:0:0:0,-5.41854,-10 0/0:66.6836:20:20:728:0:0:0,-6.0206,-10 0/0:57.6527:17:17:610:0:0:0,-5.11751,-10 0/0:24.5394:6:6:219:0:0:0,-1.80618,-10 0/0:66.6836:20:20:670:0:0:0,-6.0206,-10 0/0:27.5497:7:7:264:0:0:0,-2.10721,-10 0/0:36.5806:10:10:375:0:0:0,-3.0103,-10 0/0:33.5703:9:9:342:0:0:0,-2.70927,-10 0/0:9.48793:1:1:37:0:0:0,-0.30103,-3.7 0/0:27.5497:7:7:264:0:0:0,-2.10721,-10 0/0:31.4424:16:15:550:1:16:0,-2.01236,-10 0/0:81.7351:25:25:920:0:0:0,-7.52575,-10 0/0:63.6733:19:19:718:0:0:0,-5.71957,-10 0/1:99:24:11:384:13:400:-10,0,-10 0/0:51.6321:15:15:565:0:0:0,-4.51545,-10 0/0:18.5188:4:4:152:0:0:0,-1.20412,-10 1/1:37.245:21:0:0:21:797:-10,-6.32163,0 1/1:13.1626:13:0:0:13:464:-10,-3.91339,0 0/0:21.5291:5:5:185:0:0:0,-1.50515,-10 0/0:45.6115:13:13:482:0:0:0,-3.91339,-10 0/0:51.6321:15:15:545:0:0:0,-4.51545,-10 0/0:36.5806:10:10:369:0:0:0,-3.0103,-10 scaffold_6 5877562 . A G 970.751 . AB=0.732143;ABP=29.2231;AC=4;AF=0.0217391;AN=184;AO=42;CIGAR=1X;DP=1318;DPB=1318;DPRA=1.09452;EPP=3.21711;EPPR=3.56254;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=3.8741;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1470;QR=46366;RO=1274;RPP=94.2121;RPPR=2769.47;RUN=1;SAF=22;SAP=3.21711;SAR=20;SRF=646;SRP=3.56254;SRR=628;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.2961:17:17:620:0:0:0,-5.11751,-10 0/0:35.2034:8:8:298:0:0:0,-2.40824,-10 0/0:56.2755:15:15:541:0:0:0,-4.51545,-10 0/0:38.2137:9:9:305:0:0:0,-2.70927,-10 0/0:38.2137:9:9:305:0:0:0,-2.70927,-10 0/0:23.1622:4:4:148:0:0:0,-1.20412,-10 0/0:98.4183:29:29:978:0:0:0,-8.72987,-10 0/0:38.2137:9:9:341:0:0:0,-2.70927,-10 0/0:56.2755:15:15:546:0:0:0,-4.51545,-10 0/0:17.1416:2:2:76:0:0:0,-0.60206,-7.22 0/0:35.2034:8:8:302:0:0:0,-2.40824,-10 0/0:38.2137:9:9:290:0:0:0,-2.70927,-10 0/0:86.3785:25:25:901:0:0:0,-7.52575,-10 0/0:83.3681:24:24:868:0:0:0,-7.22472,-10 0/0:53.2652:14:14:507:0:0:0,-4.21442,-10 0/0:65.3064:18:18:653:0:0:0,-5.41854,-10 0/0:77.3476:22:22:795:0:0:0,-6.62266,-10 0/0:32.1931:7:7:263:0:0:0,-2.10721,-10 0/1:99:13:6:226:7:255:-10,0,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:50.2549:13:13:462:0:0:0,-3.91339,-10 0/0:80.3579:23:23:815:0:0:0,-6.92369,-10 0/0:26.1725:5:5:188:0:0:0,-1.50515,-10 0/0:47.2446:12:12:455:0:0:0,-3.61236,-10 0/0:44.2343:11:11:410:0:0:0,-3.31133,-10 0/0:59.2858:17:16:583:0:0:0,-4.81648,-10 0/0:77.3476:22:22:824:0:0:0,-6.62266,-10 0/0:47.2446:12:12:456:0:0:0,-3.61236,-10 0/0:44.2343:11:11:417:0:0:0,-3.31133,-10 0/0:95.4087:28:28:1012:0:0:0,-8.42884,-10 0/0:38.2137:9:9:342:0:0:0,-2.70927,-10 0/0:38.2137:9:9:331:0:0:0,-2.70927,-10 0/0:29.1828:6:6:227:0:0:0,-1.80618,-10 0/0:47.2446:12:12:447:0:0:0,-3.61236,-10 0/0:56.2755:15:15:564:0:0:0,-4.51545,-10 0/0:29.1828:6:6:227:0:0:0,-1.80618,-10 0/0:68.3167:19:19:693:0:0:0,-5.71957,-10 0/0:53.2652:14:14:492:0:0:0,-4.21442,-10 0/0:56.2755:15:15:567:0:0:0,-4.51545,-10 0/0:44.2343:11:11:363:0:0:0,-3.31133,-10 0/0:71.327:20:20:743:0:0:0,-6.0206,-10 0/0:53.2652:14:14:526:0:0:0,-4.21442,-10 0/0:38.2137:9:9:322:0:0:0,-2.70927,-10 0/0:95.4087:28:28:1018:0:0:0,-8.42884,-10 0/0:44.2343:11:11:388:0:0:0,-3.31133,-10 0/0:59.2858:16:16:594:0:0:0,-4.81648,-10 0/0:89.3887:26:26:988:0:0:0,-7.82678,-10 0/0:74.3373:21:21:732:0:0:0,-6.32163,-10 0/0:47.2446:12:12:456:0:0:0,-3.61236,-10 0/0:80.3579:23:23:836:0:0:0,-6.92369,-10 0/0:41.224:10:10:361:0:0:0,-3.0103,-10 0/0:77.3476:22:22:785:0:0:0,-6.62266,-10 0/0:32.1931:7:7:265:0:0:0,-2.10721,-10 0/0:26.1725:5:5:175:0:0:0,-1.50515,-10 0/0:95.4087:28:28:1008:0:0:0,-8.42884,-10 0/1:0.0299026:10:0:0:10:361:-10,-3.0103,0 0/0:44.2343:12:11:394:0:0:0,-3.31133,-10 0/0:32.1931:7:7:260:0:0:0,-2.10721,-10 0/0:44.2343:11:11:393:0:0:0,-3.31133,-10 0/0:41.224:10:10:376:0:0:0,-3.0103,-10 0/1:99:23:9:335:14:518:-10,0,-10 0/0:38.2137:9:9:337:0:0:0,-2.70927,-10 0/0:77.3476:22:22:827:0:0:0,-6.62266,-10 0/1:0.0299026:10:0:0:10:321:-10,-3.0103,0 0/0:35.2034:8:8:301:0:0:0,-2.40824,-10 0/0:77.3476:22:22:823:0:0:0,-6.62266,-10 0/0:77.3476:22:22:824:0:0:0,-6.62266,-10 0/0:38.2137:9:9:295:0:0:0,-2.70927,-10 0/0:80.3579:23:23:846:0:0:0,-6.92369,-10 0/0:47.2446:12:12:444:0:0:0,-3.61236,-10 0/0:44.2343:11:11:406:0:0:0,-3.31133,-10 0/0:53.0362:22:21:785:1:15:0,-3.78024,-10 0/0:56.2755:15:15:558:0:0:0,-4.51545,-10 0/0:41.224:10:10:347:0:0:0,-3.0103,-10 0/0:80.3579:23:23:818:0:0:0,-6.92369,-10 0/0:38.2137:9:9:320:0:0:0,-2.70927,-10 0/0:68.3167:19:19:692:0:0:0,-5.71957,-10 0/0:53.2652:14:14:462:0:0:0,-4.21442,-10 0/0:20.1519:3:3:91:0:0:0,-0.90309,-8.49333 0/0:41.224:10:10:379:0:0:0,-3.0103,-10 0/0:80.3579:23:23:849:0:0:0,-6.92369,-10 0/0:56.2755:15:15:534:0:0:0,-4.51545,-10 0/0:56.2755:15:15:508:0:0:0,-4.51545,-10 0/0:62.2961:17:17:641:0:0:0,-5.11751,-10 0/0:74.3373:21:21:741:0:0:0,-6.32163,-10 0/0:32.1931:7:7:235:0:0:0,-2.10721,-10 0/0:47.2446:12:12:453:0:0:0,-3.61236,-10 0/0:35.2034:8:8:293:0:0:0,-2.40824,-10 0/0:20.1519:3:3:114:0:0:0,-0.90309,-10 0/0:62.2961:17:17:604:0:0:0,-5.11751,-10 0/0:50.2549:13:13:481:0:0:0,-3.91339,-10 0/0:47.2446:12:12:452:0:0:0,-3.61236,-10 scaffold_6 5940233 . C T 24832.5 . AB=0.483221;ABP=3.73898;AC=125;AF=0.679348;AN=184;AO=856;CIGAR=1X;DP=1275;DPB=1275;DPRA=1.05272;EPP=8.85501;EPPR=3.05694;GTI=2;LEN=1;MEANALT=1;MQM=59.9521;MQMR=60;NS=92;NUMALT=1;ODDS=0.569003;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=31367;QR=15287;RO=419;RPP=1861.79;RPPR=912.857;RUN=1;SAF=452;SAP=8.85501;SAR=404;SRF=211;SRP=3.05694;SRR=208;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:23.3733:10:10:351:0:0:0,-3.0103,-10 1/1:22.1625:6:0:0:6:227:-10,-1.80618,0 0/1:99:18:9:341:9:342:-10,0,-10 1/1:34.2037:10:0:0:10:379:-10,-3.0103,0 0/1:99:11:8:303:3:110:-9.17282,0,-10 1/1:37.214:11:0:0:11:415:-10,-3.31133,0 0/1:99:32:16:583:16:604:-10,0,-10 0/1:99:18:14:532:4:151:-10,0,-10 1/1:28.1831:8:0:0:8:302:-10,-2.40824,0 0/1:0.306777:3:3:114:0:0:0,-0.90309,-10 1/1:31.1934:9:0:0:9:342:-10,-2.70927,0 0/0:20.363:9:9:304:0:0:0,-2.70927,-10 1/1:76.3478:24:0:0:24:887:-10,-7.22472,0 0/1:99:19:9:302:10:379:-10,0,-10 0/1:99:17:8:259:9:342:-10,0,-10 0/1:99:17:11:392:6:228:-10,0,-10 0/1:99:11:6:228:5:168:-10,0,-10 1/1:16.1419:4:0:0:4:151:-10,-1.20412,0 0/1:99:16:7:225:9:341:-10,0,-10 1/1:15.4904:19:1:36:18:630:-10,-0.840816,0 1/1:58.2861:18:0:0:18:673:-10,-5.41854,0 1/1:91.3983:29:0:0:29:1061:-10,-8.72987,0 0/0:17.3527:8:8:297:0:0:0,-2.40824,-10 1/1:37.214:11:0:0:11:373:-10,-3.31133,0 1/1:61.2964:19:0:0:19:698:-10,-5.71957,0 0/1:99:8:4:138:4:152:-10,0,-10 1/1:46.2449:14:0:0:14:489:-10,-4.21442,0 1/1:31.1934:9:0:0:9:302:-10,-2.70927,0 1/1:40.2243:12:0:0:12:452:-10,-3.61236,0 1/1:73.3376:23:0:0:23:840:-10,-6.92369,0 1/1:25.1728:7:0:0:7:208:-10,-2.10721,0 1/1:25.1728:7:0:0:7:234:-10,-2.10721,0 1/1:43.2346:13:0:0:13:490:-10,-3.91339,0 1/1:25.1728:7:0:0:7:264:-10,-2.10721,0 1/1:34.2037:10:0:0:10:358:-10,-3.0103,0 1/1:13.1316:3:0:0:3:95:-8.86667,-0.90309,0 1/1:34.2037:10:0:0:10:366:-10,-3.0103,0 1/1:70.3272:22:0:0:22:818:-10,-6.62266,0 1/1:52.2655:16:0:0:16:593:-10,-4.81648,0 1/1:34.2037:10:0:0:10:369:-10,-3.0103,0 1/1:61.2964:19:0:0:19:713:-10,-5.71957,0 1/1:34.2037:10:0:0:10:358:-10,-3.0103,0 1/1:43.2346:13:0:0:13:455:-10,-3.91339,0 1/1:67.317:21:0:0:21:783:-10,-6.32163,0 0/1:99:14:5:179:9:291:-10,0,-10 1/1:43.2346:13:0:0:13:494:-10,-3.91339,0 1/1:64.3067:20:0:0:20:719:-10,-6.0206,0 1/1:82.3683:26:0:0:26:970:-10,-7.82678,0 1/1:43.2346:13:0:0:13:477:-10,-3.91339,0 1/1:97.4155:31:0:0:31:1112:-10,-9.33193,0 0/0:11.3321:6:6:203:0:0:0,-1.80618,-10 1/1:88.3885:28:0:0:28:1030:-10,-8.42884,0 1/1:43.2346:13:0:0:13:489:-10,-3.91339,0 1/1:10.1213:2:0:0:2:76:-7.22,-0.60206,0 1/1:99:32:0:0:32:1190:-10,-9.63296,0 1/1:25.1728:7:0:0:7:264:-10,-2.10721,0 1/1:64.3067:20:0:0:20:714:-10,-6.0206,0 1/1:31.1934:9:0:0:9:341:-10,-2.70927,0 0/0:17.3527:8:8:292:0:0:0,-2.40824,-10 1/1:13.1316:3:0:0:3:114:-10,-0.90309,0 0/1:99:21:8:281:13:481:-10,0,-10 1/1:40.2243:12:0:0:12:432:-10,-3.61236,0 0/0:86.5897:31:31:1159:0:0:0,-9.33193,-10 0/1:98.526:9:3:114:6:225:-10,0,-9.85501 1/1:31.1934:9:0:0:9:341:-10,-2.70927,0 0/0:80.569:29:29:1001:0:0:0,-8.72987,-10 0/1:95.2664:11:3:114:8:270:-10,0,-9.54615 0/0:20.363:9:9:324:0:0:0,-2.70927,-10 0/1:99:17:9:329:8:282:-10,0,-10 0/0:14.3424:7:7:261:0:0:0,-2.10721,-10 0/0:26.3836:11:11:403:0:0:0,-3.31133,-10 0/0:35.4145:14:14:527:0:0:0,-4.21442,-10 0/0:44.4454:17:17:646:0:0:0,-5.11751,-10 0/0:23.3733:10:10:348:0:0:0,-3.0103,-10 0/0:50.466:19:19:706:0:0:0,-5.71957,-10 0/0:38.4248:15:15:550:0:0:0,-4.51545,-10 0/0:20.363:9:9:338:0:0:0,-2.70927,-10 0/1:0.636883:4:4:141:0:0:0,-1.20412,-10 1/1:19.1522:5:0:0:5:181:-10,-1.50515,0 0/0:11.3321:6:6:219:0:0:0,-1.80618,-10 1/1:79.3581:25:0:0:25:912:-10,-7.52575,0 0/1:99:16:8:303:8:304:-10,0,-10 1/1:43.2346:13:0:0:13:471:-10,-3.91339,0 1/1:43.2346:13:0:0:13:494:-10,-3.91339,0 0/1:99:15:8:302:7:262:-10,0,-10 1/1:22.1625:6:0:0:6:221:-10,-1.80618,0 1/1:40.2243:12:0:0:12:449:-10,-3.61236,0 1/1:25.1728:7:0:0:7:243:-10,-2.10721,0 0/1:81.8167:5:3:114:2:76:-6.71485,0,-10 0/1:99:23:15:550:8:300:-10,0,-10 0/0:62.5072:23:23:872:0:0:0,-6.92369,-10 0/0:41.4351:16:16:606:0:0:0,-4.81648,-10 scaffold_6 5940272 . T G 1694.65 . AB=0.656566;ABP=24.0889;AC=6;AF=0.0326087;AN=184;AO=65;CIGAR=1X;DP=1302;DPB=1302;DPRA=1.17955;EPP=8.65613;EPPR=16.6154;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9806;NS=92;NUMALT=1;ODDS=2.47601;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2387;QR=44981;RO=1236;RPP=127.319;RPPR=2449.25;RUN=1;SAF=24;SAP=12.665;SAR=41;SRF=634;SRP=4.80932;SRR=602;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:36.2931:10:10:376:0:0:0,-3.0103,-10 0/0:24.2519:6:6:226:0:0:0,-1.80618,-10 0/1:99:20:9:329:11:417:-10,0,-10 0/1:0.221665:10:0:0:10:362:-10,-3.0103,0 0/0:45.324:13:13:414:0:0:0,-3.91339,-10 0/0:39.3034:11:11:416:0:0:0,-3.31133,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:60.3755:18:18:676:0:0:0,-5.41854,-10 0/0:30.2725:8:8:294:0:0:0,-2.40824,-10 0/0:18.2313:4:4:152:0:0:0,-1.20412,-10 0/1:0.109418:9:0:0:9:341:-10,-2.70927,0 0/0:33.2828:9:9:297:0:0:0,-2.70927,-10 0/0:84.4579:26:26:956:0:0:0,-7.82678,-10 0/1:99:19:8:286:11:384:-10,0,-10 0/0:54.3549:16:16:599:0:0:0,-4.81648,-10 0/0:60.3755:18:18:670:0:0:0,-5.41854,-10 0/0:39.3034:11:11:391:0:0:0,-3.31133,-10 0/0:18.2313:4:4:150:0:0:0,-1.20412,-10 0/0:54.3549:16:16:561:0:0:0,-4.81648,-10 0/0:63.3858:19:19:704:0:0:0,-5.71957,-10 0/0:63.3858:19:19:674:0:0:0,-5.71957,-10 0/0:93.4883:29:29:1062:0:0:0,-8.72987,-10 0/0:30.2725:8:8:291:0:0:0,-2.40824,-10 0/0:39.3034:11:11:413:0:0:0,-3.31133,-10 0/0:66.3961:20:20:691:0:0:0,-6.0206,-10 0/0:30.2725:8:8:297:0:0:0,-2.40824,-10 0/0:48.3343:14:14:505:0:0:0,-4.21442,-10 0/0:33.2828:9:9:316:0:0:0,-2.70927,-10 0/0:42.3137:12:12:436:0:0:0,-3.61236,-10 0/0:75.427:23:23:812:0:0:0,-6.92369,-10 0/0:30.2725:8:8:229:0:0:0,-2.40824,-10 0/0:30.2725:8:8:299:0:0:0,-2.40824,-10 0/0:45.324:13:13:494:0:0:0,-3.91339,-10 0/0:27.2622:7:7:255:0:0:0,-2.10721,-10 0/0:36.2931:10:10:372:0:0:0,-3.0103,-10 0/0:15.221:3:3:100:0:0:0,-0.90309,-9.33333 0/0:36.2931:10:10:345:0:0:0,-3.0103,-10 0/0:75.427:23:23:849:0:0:0,-6.92369,-10 0/0:51.3446:15:15:554:0:0:0,-4.51545,-10 0/0:36.2931:10:10:374:0:0:0,-3.0103,-10 0/0:63.3858:19:19:679:0:0:0,-5.71957,-10 0/0:36.2931:10:10:375:0:0:0,-3.0103,-10 0/0:45.324:13:13:450:0:0:0,-3.91339,-10 0/0:69.4064:21:21:797:0:0:0,-6.32163,-10 0/0:48.3343:14:14:472:0:0:0,-4.21442,-10 0/0:51.3446:15:15:560:0:0:0,-4.51545,-10 0/0:63.3858:19:19:715:0:0:0,-5.71957,-10 0/0:84.4579:26:26:958:0:0:0,-7.82678,-10 0/0:45.324:13:13:474:0:0:0,-3.91339,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:27.2622:7:7:248:0:0:0,-2.10721,-10 0/0:93.4883:29:29:1065:0:0:0,-8.72987,-10 0/0:45.324:13:13:447:0:0:0,-3.91339,-10 0/0:12.2107:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:33:33:1181:0:0:0,-9.93399,-10 0/0:27.2622:7:7:266:0:0:0,-2.10721,-10 0/0:66.3961:20:20:722:0:0:0,-6.0206,-10 0/0:42.3137:12:12:429:0:0:0,-3.61236,-10 0/0:30.2725:8:8:291:0:0:0,-2.40824,-10 0/0:15.221:3:3:114:0:0:0,-0.90309,-10 0/0:72.4167:22:22:787:0:0:0,-6.62266,-10 0/0:42.3137:12:12:451:0:0:0,-3.61236,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:33.2828:9:9:337:0:0:0,-2.70927,-10 0/0:33.2828:9:9:341:0:0:0,-2.70927,-10 0/0:96.498:31:30:1063:0:0:0,-9.0309,-10 0/0:48.3343:14:14:473:0:0:0,-4.21442,-10 0/0:33.2828:9:9:314:0:0:0,-2.70927,-10 0/0:57.3652:17:17:628:0:0:0,-5.11751,-10 0/0:33.2828:9:9:333:0:0:0,-2.70927,-10 0/0:39.3034:11:11:414:0:0:0,-3.31133,-10 0/0:48.3343:14:14:519:0:0:0,-4.21442,-10 0/0:57.3652:17:17:626:0:0:0,-5.11751,-10 0/0:36.2931:10:10:371:0:0:0,-3.0103,-10 0/0:63.3858:19:19:702:0:0:0,-5.71957,-10 0/0:51.3446:15:15:485:0:0:0,-4.51545,-10 0/0:33.2828:9:9:339:0:0:0,-2.70927,-10 0/0:18.2313:4:4:149:0:0:0,-1.20412,-10 0/0:21.2416:5:5:189:0:0:0,-1.50515,-10 0/0:24.2519:6:6:206:0:0:0,-1.80618,-10 0/1:99:25:9:332:16:579:-10,0,-10 0/1:99:16:8:302:8:304:-10,0,-10 0/0:45.324:13:13:491:0:0:0,-3.91339,-10 0/0:45.324:13:13:491:0:0:0,-3.91339,-10 0/0:48.3343:14:14:525:0:0:0,-4.21442,-10 0/0:24.2519:6:6:221:0:0:0,-1.80618,-10 0/0:42.3137:12:12:441:0:0:0,-3.61236,-10 0/0:27.2622:7:7:252:0:0:0,-2.10721,-10 0/0:21.2416:5:5:190:0:0:0,-1.50515,-10 0/0:78.4373:24:24:854:0:0:0,-7.22472,-10 0/0:78.4373:24:24:908:0:0:0,-7.22472,-10 0/0:54.3549:16:16:594:0:0:0,-4.81648,-10 scaffold_6 5963544 . T A 293.596 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=12;CIGAR=1X;DP=1595;DPB=1595;DPRA=1.3902;EPP=3.0103;EPPR=7.16508;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.945;NS=92;NUMALT=1;ODDS=9.02597;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=446;QR=58371;RO=1581;RPP=29.068;RPPR=3349.8;RUN=1;SAF=6;SAP=3.0103;SAR=6;SRF=773;SRP=4.69281;SRR=808;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:75.3252:16:16:581:0:0:0,-4.81648,-10 0/0:63.284:12:12:456:0:0:0,-3.61236,-10 0/0:99:27:27:971:0:0:0,-8.12781,-10 0/0:60.2737:11:11:405:0:0:0,-3.31133,-10 0/0:63.284:12:12:456:0:0:0,-3.61236,-10 0/0:63.284:12:12:443:0:0:0,-3.61236,-10 0/0:99:34:34:1210:0:0:0,-10,-10 0/0:90.3768:21:21:792:0:0:0,-6.32163,-10 0/0:72.3149:15:15:566:0:0:0,-4.51545,-10 0/0:42.2119:5:5:173:0:0:0,-1.50515,-10 0/0:72.3149:15:15:570:0:0:0,-4.51545,-10 0/0:51.2428:8:8:302:0:0:0,-2.40824,-10 0/0:99:35:35:1237:0:0:0,-10,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:99:27:27:953:0:0:0,-8.12781,-10 0/0:75.3252:16:16:602:0:0:0,-4.81648,-10 0/0:96.3936:23:23:810:0:0:0,-6.92369,-10 0/0:51.2428:8:8:303:0:0:0,-2.40824,-10 0/0:75.3252:16:16:605:0:0:0,-4.81648,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:81.3457:18:18:682:0:0:0,-5.41854,-10 0/0:99:24:24:902:0:0:0,-7.22472,-10 0/0:51.2428:8:8:290:0:0:0,-2.40824,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:93.3851:22:22:812:0:0:0,-6.62266,-10 0/0:81.3457:18:18:657:0:0:0,-5.41854,-10 0/0:75.3252:16:16:574:0:0:0,-4.81648,-10 0/0:60.2737:11:11:418:0:0:0,-3.31133,-10 0/0:57.2634:10:10:378:0:0:0,-3.0103,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:63.284:12:12:452:0:0:0,-3.61236,-10 0/0:42.2119:5:5:189:0:0:0,-1.50515,-10 0/0:75.3252:16:16:597:0:0:0,-4.81648,-10 0/0:48.2325:7:7:266:0:0:0,-2.10721,-10 0/0:99:24:24:892:0:0:0,-7.22472,-10 0/0:45.2222:6:6:228:0:0:0,-1.80618,-10 0/0:75.3252:16:16:570:0:0:0,-4.81648,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:66.2943:13:13:489:0:0:0,-3.91339,-10 0/0:60.2737:11:11:395:0:0:0,-3.31133,-10 0/0:81.3457:18:18:674:0:0:0,-5.41854,-10 0/0:75.3252:16:16:597:0:0:0,-4.81648,-10 0/0:75.3252:16:16:594:0:0:0,-4.81648,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:75.3252:16:16:598:0:0:0,-4.81648,-10 0/0:72.3149:15:15:556:0:0:0,-4.51545,-10 0/0:99:38:38:1427:0:0:0,-10,-10 0/0:99:26:26:968:0:0:0,-7.82678,-10 0/0:51.2428:8:8:303:0:0:0,-2.40824,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:66.2943:13:13:488:0:0:0,-3.91339,-10 0/0:96.3936:23:23:839:0:0:0,-6.92369,-10 0/0:57.2634:10:10:357:0:0:0,-3.0103,-10 0/0:54.2531:9:9:339:0:0:0,-2.70927,-10 0/0:99:40:40:1472:0:0:0,-10,-10 0/0:60.2737:11:11:418:0:0:0,-3.31133,-10 0/0:66.2943:13:13:449:0:0:0,-3.91339,-10 0/0:51.2428:8:8:299:0:0:0,-2.40824,-10 0/0:69.3046:15:14:527:0:0:0,-4.21442,-10 0/0:51.2428:8:8:302:0:0:0,-2.40824,-10 0/0:99:27:27:1014:0:0:0,-8.12781,-10 0/0:84.3559:19:19:714:0:0:0,-5.71957,-10 0/0:99:24:24:901:0:0:0,-7.22472,-10 0/0:81.3457:18:18:677:0:0:0,-5.41854,-10 0/0:60.2737:11:11:397:0:0:0,-3.31133,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:90.3768:21:21:761:0:0:0,-6.32163,-10 0/0:66.2943:13:13:467:0:0:0,-3.91339,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:45.2222:6:6:214:0:0:0,-1.80618,-10 0/0:66.2943:13:13:492:0:0:0,-3.91339,-10 0/0:93.3851:22:22:836:0:0:0,-6.62266,-10 0/1:99:24:12:456:12:446:-10,0,-10 0/0:63.284:12:12:450:0:0:0,-3.61236,-10 0/0:99:26:26:941:0:0:0,-7.82678,-10 0/0:66.2943:13:13:454:0:0:0,-3.91339,-10 0/0:90.3768:21:21:793:0:0:0,-6.32163,-10 0/0:69.3046:14:14:516:0:0:0,-4.21442,-10 0/0:39.2016:5:4:152:0:0:0,-1.20412,-10 0/0:39.2016:4:4:150:0:0:0,-1.20412,-10 0/0:99:25:25:937:0:0:0,-7.52575,-10 0/0:90.3768:21:21:775:0:0:0,-6.32163,-10 0/0:66.2943:13:13:431:0:0:0,-3.91339,-10 0/0:75.3252:16:16:605:0:0:0,-4.81648,-10 0/0:78.3354:17:17:610:0:0:0,-5.11751,-10 0/0:60.2737:11:11:408:0:0:0,-3.31133,-10 0/0:66.2943:13:13:484:0:0:0,-3.91339,-10 0/0:60.2737:11:11:373:0:0:0,-3.31133,-10 0/0:45.2222:6:6:224:0:0:0,-1.80618,-10 0/0:84.3559:19:19:691:0:0:0,-5.71957,-10 0/0:90.3768:21:21:791:0:0:0,-6.32163,-10 0/0:78.3354:17:17:635:0:0:0,-5.11751,-10 scaffold_6 6016142 . T C 60.6658 . AB=0.357143;ABP=5.49198;AC=1;AF=0.00543478;AN=184;AO=5;CIGAR=1X;DP=1783;DPB=1783;DPRA=0.720181;EPP=13.8677;EPPR=3.04088;GTI=0;LEN=1;MEANALT=1;MQM=51;MQMR=59.6479;NS=92;NUMALT=1;ODDS=12.8616;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=186;QR=65026;RO=1775;RPP=13.8677;RPPR=3857.37;RUN=1;SAF=0;SAP=13.8677;SAR=5;SRF=890;SRP=3.04088;SRR=885;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:79.9395:10:9:340:0:0:0,-2.70927,-10 0/0:70.9087:6:6:220:0:0:0,-1.80618,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:85.9599:11:11:406:0:0:0,-3.31133,-10 0/0:85.9599:11:11:378:0:0:0,-3.31133,-10 0/0:82.9497:10:10:358:0:0:0,-3.0103,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:94.9892:14:14:528:0:0:0,-4.21442,-10 0/0:82.9497:10:10:380:0:0:0,-3.0103,-10 0/0:58.8675:2:2:63:0:0:0,-0.60206,-5.985 0/0:88.97:12:12:446:0:0:0,-3.61236,-10 0/0:70.9087:6:6:220:0:0:0,-1.80618,-10 0/0:99:25:25:891:0:0:0,-7.52575,-10 0/0:99:45:45:1648:0:0:0,-10,-10 0/0:99:19:19:687:0:0:0,-5.71957,-10 0/0:97.9977:15:15:558:0:0:0,-4.51545,-10 0/1:60.6658:14:9:309:5:186:-10,0,-10 0/0:94.9892:14:14:529:0:0:0,-4.21442,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:99:21:21:745:0:0:0,-6.32163,-10 0/0:99:34:34:1268:0:0:0,-10,-10 0/0:58.8675:2:2:75:0:0:0,-0.60206,-7.125 0/0:91.9799:13:13:477:0:0:0,-3.91339,-10 0/0:99:20:20:743:0:0:0,-6.0206,-10 0/0:99:40:40:1498:0:0:0,-10,-10 0/0:99:24:24:875:0:0:0,-7.22472,-10 0/0:85.9599:11:11:391:0:0:0,-3.31133,-10 0/0:99:24:24:815:0:0:0,-7.22472,-10 0/0:99:37:37:1363:0:0:0,-10,-10 0/0:64.8881:4:4:145:0:0:0,-1.20412,-10 0/0:85.9599:11:11:384:0:0:0,-3.31133,-10 0/0:97.9977:15:15:565:0:0:0,-4.51545,-10 0/0:88.97:12:12:429:0:0:0,-3.61236,-10 0/0:99:16:16:599:0:0:0,-4.81648,-10 0/0:64.8881:4:4:130:0:0:0,-1.20412,-10 0/0:73.9189:7:7:266:0:0:0,-2.10721,-10 0/0:99:34:34:1223:0:0:0,-10,-10 0/0:99:19:19:711:0:0:0,-5.71957,-10 0/0:99:17:17:643:0:0:0,-5.11751,-10 0/0:99:30:30:1127:0:0:0,-9.0309,-10 0/0:99:21:21:763:0:0:0,-6.32163,-10 0/0:99:21:21:748:0:0:0,-6.32163,-10 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:99:16:16:585:0:0:0,-4.81648,-10 0/0:82.9497:10:10:377:0:0:0,-3.0103,-10 0/0:99:56:55:2029:0:0:0,-10,-10 0/0:99:34:34:1267:0:0:0,-10,-10 0/0:99:22:22:797:0:0:0,-6.62266,-10 0/0:99:31:31:1122:0:0:0,-9.33193,-10 0/0:88.97:12:12:369:0:0:0,-3.61236,-10 0/0:99:45:44:1570:0:0:0,-10,-10 0/0:99:16:16:605:0:0:0,-4.81648,-10 0/0:70.9087:6:6:228:0:0:0,-1.80618,-10 0/0:99:57:57:2144:0:0:0,-10,-10 0/0:94.9892:14:14:523:0:0:0,-4.21442,-10 0/0:99:20:20:747:0:0:0,-6.0206,-10 0/0:61.8778:3:3:112:0:0:0,-0.90309,-10 0/0:99:16:16:570:0:0:0,-4.81648,-10 0/0:94.9892:14:14:528:0:0:0,-4.21442,-10 0/0:99:23:23:812:0:0:0,-6.92369,-10 0/0:99:19:19:711:0:0:0,-5.71957,-10 0/0:99:44:44:1628:0:0:0,-10,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:99:16:16:604:0:0:0,-4.81648,-10 0/0:99:30:30:1125:0:0:0,-9.0309,-10 0/0:99:16:16:587:0:0:0,-4.81648,-10 0/0:97.9977:15:15:567:0:0:0,-4.51545,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:94.9892:14:14:482:0:0:0,-4.21442,-10 0/0:99:16:16:563:0:0:0,-4.81648,-10 0/0:99:31:31:1114:0:0:0,-9.33193,-10 0/0:99:20:20:742:0:0:0,-6.0206,-10 0/0:99:17:17:622:0:0:0,-5.11751,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:88.97:12:12:423:0:0:0,-3.61236,-10 0/0:85.9599:11:11:413:0:0:0,-3.31133,-10 0/0:79.9395:9:9:315:0:0:0,-2.70927,-10 0/0:55.8572:1:1:38:0:0:0,-0.30103,-3.8 0/0:88.97:12:12:455:0:0:0,-3.61236,-10 0/0:99:30:30:1132:0:0:0,-9.0309,-10 0/0:99:42:42:1545:0:0:0,-10,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:99:28:28:1037:0:0:0,-8.42884,-10 0/0:99:26:26:933:0:0:0,-7.82678,-10 0/0:58.8675:2:2:72:0:0:0,-0.60206,-6.84 0/0:99:22:22:816:0:0:0,-6.62266,-10 0/0:85.9599:11:11:394:0:0:0,-3.31133,-10 0/0:58.8675:2:2:53:0:0:0,-0.60206,-5.035 0/0:82.9497:10:10:359:0:0:0,-3.0103,-10 0/0:85.9599:11:11:417:0:0:0,-3.31133,-10 0/0:82.9497:10:10:376:0:0:0,-3.0103,-10 scaffold_6 6100550 . A C 207.189 . AB=0.409091;ABP=4.58955;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1589;DPB=1589;DPRA=1.2776;EPP=5.18177;EPPR=4.50791;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9943;NS=92;NUMALT=1;ODDS=10.4013;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=341;QR=58068;RO=1579;RPP=22.5536;RPPR=3431.77;RUN=1;SAF=6;SAP=5.18177;SAR=3;SRF=773;SRP=4.50791;SRR=806;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:81.2965:15:15:568:0:0:0,-4.51545,-10 0/0:69.2554:11:11:417:0:0:0,-3.31133,-10 0/0:72.2657:12:12:449:0:0:0,-3.61236,-10 0/0:57.2142:7:7:264:0:0:0,-2.10721,-10 0/0:66.2451:10:10:380:0:0:0,-3.0103,-10 0/0:75.276:13:13:480:0:0:0,-3.91339,-10 0/0:99:47:47:1652:0:0:0,-10,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:78.2863:14:14:520:0:0:0,-4.21442,-10 0/0:48.1833:4:4:140:0:0:0,-1.20412,-10 0/0:60.2245:8:8:259:0:0:0,-2.40824,-10 0/0:78.2863:14:14:517:0:0:0,-4.21442,-10 0/0:99:24:24:856:0:0:0,-7.22472,-10 0/0:84.3068:16:16:606:0:0:0,-4.81648,-10 0/0:81.2965:15:15:559:0:0:0,-4.51545,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:99:24:24:886:0:0:0,-7.22472,-10 0/0:69.2554:11:11:418:0:0:0,-3.31133,-10 0/0:81.2965:16:15:542:0:0:0,-4.51545,-10 0/0:99:51:51:1855:0:0:0,-10,-10 0/0:90.3271:18:18:642:0:0:0,-5.41854,-10 0/0:99:21:21:792:0:0:0,-6.32163,-10 0/0:72.2657:12:12:455:0:0:0,-3.61236,-10 0/0:99:24:24:869:0:0:0,-7.22472,-10 0/0:60.2245:8:8:293:0:0:0,-2.40824,-10 0/0:93.337:19:19:719:0:0:0,-5.71957,-10 0/0:84.3068:16:16:574:0:0:0,-4.81648,-10 0/0:63.2348:9:9:342:0:0:0,-2.70927,-10 0/0:93.337:19:19:687:0:0:0,-5.71957,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:51.1936:5:5:183:0:0:0,-1.50515,-10 0/0:51.1936:5:5:190:0:0:0,-1.50515,-10 0/0:90.3271:18:18:657:0:0:0,-5.41854,-10 0/0:57.2142:7:7:255:0:0:0,-2.10721,-10 0/0:90.3271:18:18:677:0:0:0,-5.41854,-10 0/0:45.173:3:3:111:0:0:0,-0.90309,-10 0/0:54.2039:6:6:219:0:0:0,-1.80618,-10 0/0:99:26:26:927:0:0:0,-7.82678,-10 0/0:72.2657:12:12:424:0:0:0,-3.61236,-10 0/0:66.2451:10:10:380:0:0:0,-3.0103,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:84.3068:16:16:579:0:0:0,-4.81648,-10 0/0:72.2657:12:12:445:0:0:0,-3.61236,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:96.3464:20:20:734:0:0:0,-6.0206,-10 0/0:75.276:13:13:480:0:0:0,-3.91339,-10 0/0:99:28:28:1001:0:0:0,-8.42884,-10 0/0:90.3271:18:18:661:0:0:0,-5.41854,-10 0/0:57.2142:7:7:266:0:0:0,-2.10721,-10 0/0:99:35:35:1286:0:0:0,-10,-10 0/0:78.2863:14:14:508:0:0:0,-4.21442,-10 0/0:81.2965:15:15:548:0:0:0,-4.51545,-10 0/0:78.2863:14:14:525:0:0:0,-4.21442,-10 0/0:69.2554:11:11:415:0:0:0,-3.31133,-10 0/0:99:39:39:1422:0:0:0,-10,-10 0/0:81.2965:15:15:551:0:0:0,-4.51545,-10 0/0:99:21:21:784:0:0:0,-6.32163,-10 0/0:63.2348:9:9:312:0:0:0,-2.70927,-10 0/0:78.2863:14:14:522:0:0:0,-4.21442,-10 0/0:69.2554:11:11:392:0:0:0,-3.31133,-10 0/0:99:22:22:826:0:0:0,-6.62266,-10 0/0:75.276:13:13:491:0:0:0,-3.91339,-10 0/0:99:30:30:1120:0:0:0,-9.0309,-10 0/1:99:22:13:494:9:341:-10,0,-10 0/0:66.2451:10:10:368:0:0:0,-3.0103,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:99:26:26:963:0:0:0,-7.82678,-10 0/0:60.2245:8:8:303:0:0:0,-2.40824,-10 0/0:99:44:44:1631:0:0:0,-10,-10 0/0:60.2245:8:8:303:0:0:0,-2.40824,-10 0/0:78.2863:14:14:507:0:0:0,-4.21442,-10 0/0:99:27:27:988:0:0:0,-8.12781,-10 0/0:99:24:24:907:0:0:0,-7.22472,-10 0/0:78.2863:14:14:503:0:0:0,-4.21442,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:60.2245:8:8:303:0:0:0,-2.40824,-10 0/0:63.2348:9:9:333:0:0:0,-2.70927,-10 0/0:45.173:3:3:114:0:0:0,-0.90309,-10 0/0:54.2039:6:6:228:0:0:0,-1.80618,-10 0/0:51.1936:5:5:185:0:0:0,-1.50515,-10 0/0:99:30:30:1085:0:0:0,-9.0309,-10 0/0:99:28:28:1038:0:0:0,-8.42884,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:87.317:17:17:635:0:0:0,-5.11751,-10 0/0:99:22:22:827:0:0:0,-6.62266,-10 0/0:45.173:3:3:112:0:0:0,-0.90309,-10 0/0:75.276:13:13:490:0:0:0,-3.91339,-10 0/0:69.2554:11:11:404:0:0:0,-3.31133,-10 0/0:51.1936:5:5:188:0:0:0,-1.50515,-10 0/0:90.3271:18:18:640:0:0:0,-5.41854,-10 0/0:99:21:21:765:0:0:0,-6.32163,-10 0/0:99:22:22:821:0:0:0,-6.62266,-10 scaffold_6 6194460 . G A 308.755 . AB=0.52;ABP=3.09716;AC=1;AF=0.00549451;AN=182;AO=14;CIGAR=1X;DP=1901;DPB=1901;DPRA=1.37554;EPP=3.0103;EPPR=3.06669;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9968;NS=91;NUMALT=1;ODDS=10.1132;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=504;QR=69286;RO=1887;RPP=33.4109;RPPR=4100.58;RUN=1;SAF=7;SAP=3.0103;SAR=7;SRF=947;SRP=3.06669;SRR=940;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:83.0552:17:17:622:0:0:0,-5.11751,-10 0/0:52.9523:7:7:261:0:0:0,-2.10721,-10 0/0:92.0853:20:20:729:0:0:0,-6.0206,-10 0/0:74.0244:14:14:526:0:0:0,-4.21442,-10 0/0:71.0141:13:13:482:0:0:0,-3.91339,-10 0/0:64.9935:11:11:417:0:0:0,-3.31133,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:99:28:28:1017:0:0:0,-8.42884,-10 0/0:80.0451:16:16:577:0:0:0,-4.81648,-10 0/0:49.942:6:6:228:0:0:0,-1.80618,-10 0/0:58.9729:9:9:342:0:0:0,-2.70927,-10 0/0:43.9214:4:4:141:0:0:0,-1.20412,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:99:26:26:982:0:0:0,-7.82678,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:99:37:37:1335:0:0:0,-10,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:58.9729:9:9:340:0:0:0,-2.70927,-10 0/0:99:24:24:890:0:0:0,-7.22472,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:61.9832:10:10:356:0:0:0,-3.0103,-10 0/0:99:27:27:975:0:0:0,-8.12781,-10 0/0:58.9729:9:9:342:0:0:0,-2.70927,-10 0/0:99:23:23:867:0:0:0,-6.92369,-10 0/0:80.0451:16:16:604:0:0:0,-4.81648,-10 0/0:99:31:31:1147:0:0:0,-9.33193,-10 0/0:99:28:28:984:0:0:0,-8.42884,-10 0/0:68.0038:12:12:447:0:0:0,-3.61236,-10 0/0:89.0755:19:19:705:0:0:0,-5.71957,-10 0/0:99:31:31:1110:0:0:0,-9.33193,-10 0/0:64.9935:11:11:394:0:0:0,-3.31133,-10 0/0:49.942:6:6:226:0:0:0,-1.80618,-10 0/0:71.0141:13:13:489:0:0:0,-3.91339,-10 0/0:68.0038:12:12:456:0:0:0,-3.61236,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:74.0244:14:14:504:0:0:0,-4.21442,-10 .:.:.:.:.:.:.:. 0/0:99:36:36:1353:0:0:0,-10,-10 0/0:83.0552:17:17:606:0:0:0,-5.11751,-10 0/0:77.0347:15:15:545:0:0:0,-4.51545,-10 0/0:99:33:33:1244:0:0:0,-9.93399,-10 0/0:99:23:23:813:0:0:0,-6.92369,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 0/0:99:35:35:1267:0:0:0,-10,-10 0/0:95.0947:21:21:765:0:0:0,-6.32163,-10 0/0:89.0755:19:19:684:0:0:0,-5.71957,-10 0/0:99:46:46:1733:0:0:0,-10,-10 0/0:80.0451:16:16:599:0:0:0,-4.81648,-10 0/0:49.942:6:6:226:0:0:0,-1.80618,-10 0/0:99:27:27:948:0:0:0,-8.12781,-10 0/0:92.0853:20:20:756:0:0:0,-6.0206,-10 0/0:99:39:39:1443:0:0:0,-10,-10 0/0:74.0244:14:14:499:0:0:0,-4.21442,-10 0/0:58.9729:9:9:331:0:0:0,-2.70927,-10 0/0:99:34:34:1260:0:0:0,-10,-10 0/0:83.0552:17:17:641:0:0:0,-5.11751,-10 0/0:83.0552:17:17:632:0:0:0,-5.11751,-10 0/0:71.0141:13:13:492:0:0:0,-3.91339,-10 0/0:83.0552:17:17:640:0:0:0,-5.11751,-10 0/0:80.0451:16:16:576:0:0:0,-4.81648,-10 0/0:99:26:26:912:0:0:0,-7.82678,-10 0/0:89.0755:19:19:708:0:0:0,-5.71957,-10 0/0:99:39:39:1434:0:0:0,-10,-10 0/0:99:24:24:852:0:0:0,-7.22472,-10 0/0:83.0552:17:17:645:0:0:0,-5.11751,-10 0/0:99:38:38:1437:0:0:0,-10,-10 0/0:86.0654:18:18:649:0:0:0,-5.41854,-10 0/0:49.942:6:6:213:0:0:0,-1.80618,-10 0/0:99:24:24:900:0:0:0,-7.22472,-10 0/0:83.0552:17:17:628:0:0:0,-5.11751,-10 0/0:83.0552:17:17:608:0:0:0,-5.11751,-10 0/1:99:25:12:422:13:466:-10,0,-10 0/0:99:29:29:1085:0:0:0,-8.72987,-10 0/0:95.0947:21:21:793:0:0:0,-6.32163,-10 0/0:99:35:35:1272:0:0:0,-10,-10 0/0:86.0654:18:18:641:0:0:0,-5.41854,-10 0/0:92.0853:20:20:686:0:0:0,-6.0206,-10 0/0:89.0755:19:19:691:0:0:0,-5.71957,-10 0/0:61.9832:10:10:371:0:0:0,-3.0103,-10 0/0:74.0244:14:14:507:0:0:0,-4.21442,-10 0/0:99:43:43:1579:0:0:0,-10,-10 0/0:99:32:32:1195:0:0:0,-9.63296,-10 0/0:76.4305:32:31:1144:1:38:0,-4.32781,-10 0/0:99:25:25:915:0:0:0,-7.52575,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:71.0141:13:13:480:0:0:0,-3.91339,-10 0/0:99:27:27:965:0:0:0,-8.12781,-10 0/0:61.9832:10:10:349:0:0:0,-3.0103,-10 0/0:52.9523:7:7:259:0:0:0,-2.10721,-10 0/0:71.0141:13:13:465:0:0:0,-3.91339,-10 0/0:99:30:30:1127:0:0:0,-9.0309,-10 0/0:74.0244:14:14:509:0:0:0,-4.21442,-10 scaffold_6 6246015 . C T 1303.26 . AB=0.594595;ABP=5.88603;AC=4;AF=0.0217391;AN=184;AO=57;CIGAR=1X;DP=2428;DPB=2428;DPRA=0.850846;EPP=3.9627;EPPR=7.62708;GTI=1;LEN=1;MEANALT=1;MQM=59.8421;MQMR=59.9308;NS=92;NUMALT=1;ODDS=6.45307;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1989;QR=85874;RO=2371;RPP=126.784;RPPR=5151.57;RUN=1;SAF=26;SAP=3.9627;SAR=31;SRF=1221;SRP=7.62708;SRR=1150;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.1846:17:17:620:0:0:0,-5.11751,-10 0/0:31.5448:11:10:363:1:15:0,-0.769937,-10 0/0:95.258:24:24:882:0:0:0,-7.22472,-10 0/0:59.1332:12:12:454:0:0:0,-3.61236,-10 0/0:32.8462:19:18:648:1:38:0,-0.640816,-10 0/0:68.1641:15:15:568:0:0:0,-4.51545,-10 0/0:99:36:36:1308:0:0:0,-10,-10 0/0:99:29:29:1050:0:0:0,-8.72987,-10 1/1:32.9982:30:0:0:30:1068:-10,-9.0309,0 0/0:32.0405:3:3:106:0:0:0,-0.90309,-9.89333 0/0:50.1023:9:9:309:0:0:0,-2.70927,-10 0/0:47.092:8:8:294:0:0:0,-2.40824,-10 0/0:99:49:49:1836:0:0:0,-10,-10 0/0:99:44:44:1575:0:0:0,-10,-10 0/0:99:37:36:1267:1:15:0,-8.06991,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:99:26:26:935:0:0:0,-7.82678,-10 0/0:50.1023:9:9:342:0:0:0,-2.70927,-10 0/0:99:42:42:1497:0:0:0,-10,-10 0/0:99:45:45:1638:0:0:0,-10,-10 0/0:89.2356:22:22:782:0:0:0,-6.62266,-10 0/0:99:44:44:1599:0:0:0,-10,-10 0/0:65.1538:14:14:480:0:0:0,-4.21442,-10 0/0:99:34:34:1262:0:0:0,-10,-10 0/0:99:33:33:1161:0:0:0,-9.93399,-10 0/0:99:32:32:1106:0:0:0,-9.63296,-10 0/0:89.2356:22:22:761:0:0:0,-6.62266,-10 0/0:74.1846:17:17:608:0:0:0,-5.11751,-10 0/0:83.2154:20:20:730:0:0:0,-6.0206,-10 0/0:99:45:45:1631:0:0:0,-10,-10 0/0:50.1023:9:9:333:0:0:0,-2.70927,-10 0/0:74.1846:17:17:599:0:0:0,-5.11751,-10 0/0:99:35:35:1238:0:0:0,-10,-10 0/1:0.00681951:15:0:0:15:562:-10,-4.51545,0 0/0:86.2256:21:21:769:0:0:0,-6.32163,-10 0/0:77.1949:18:18:660:0:0:0,-5.41854,-10 0/0:65.1538:14:14:523:0:0:0,-4.21442,-10 0/0:99:45:45:1571:0:0:0,-10,-10 0/0:83.2154:20:20:752:0:0:0,-6.0206,-10 0/0:89.2356:22:22:800:0:0:0,-6.62266,-10 0/0:99:38:38:1403:0:0:0,-10,-10 0/0:98.2628:25:25:920:0:0:0,-7.52575,-10 0/0:74.1846:17:17:605:0:0:0,-5.11751,-10 0/0:99:42:42:1545:0:0:0,-10,-10 0/0:92.2471:23:23:825:0:0:0,-6.92369,-10 0/0:56.1229:11:11:390:0:0:0,-3.31133,-10 0/0:99:48:48:1703:0:0:0,-10,-10 0/0:98.2628:25:25:928:0:0:0,-7.52575,-10 0/0:92.2471:23:23:823:0:0:0,-6.92369,-10 0/0:99:45:45:1607:0:0:0,-10,-10 0/0:83.2154:20:20:756:0:0:0,-6.0206,-10 0/0:99:47:47:1727:0:0:0,-10,-10 0/0:77.1949:18:18:635:0:0:0,-5.41854,-10 0/0:38.0611:5:5:145:0:0:0,-1.50515,-10 0/0:99:47:47:1779:0:0:0,-10,-10 0/0:74.1846:17:17:584:0:0:0,-5.11751,-10 0/0:99:31:31:1111:0:0:0,-9.33193,-10 0/0:62.1435:13:13:417:0:0:0,-3.91339,-10 0/0:89.2356:22:22:811:0:0:0,-6.62266,-10 0/0:49.4781:18:17:624:1:16:0,-2.56327,-10 0/0:99:54:54:2013:0:0:0,-10,-10 0/0:99:26:26:938:0:0:0,-7.82678,-10 0/0:99:55:55:1975:0:0:0,-10,-10 0/0:98.2628:25:25:885:0:0:0,-7.52575,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:99:37:37:1313:0:0:0,-10,-10 0/1:99:22:15:536:7:260:-10,0,-10 0/0:74.1846:17:17:646:0:0:0,-5.11751,-10 0/0:99:57:57:2039:0:0:0,-10,-10 0/0:71.1743:16:16:602:0:0:0,-4.81648,-10 0/0:92.2471:23:23:861:0:0:0,-6.92369,-10 0/0:99:36:36:1281:0:0:0,-10,-10 0/0:84.383:30:29:1037:1:15:0,-6.05378,-10 0/0:99:29:29:1034:0:0:0,-8.72987,-10 0/0:99:39:39:1441:0:0:0,-10,-10 0/0:68.1641:15:15:524:0:0:0,-4.51545,-10 0/0:99:26:26:968:0:0:0,-7.82678,-10 0/0:86.2256:21:21:755:0:0:0,-6.32163,-10 0/0:50.1023:9:9:327:0:0:0,-2.70927,-10 0/0:44.0817:7:7:242:0:0:0,-2.10721,-10 0/0:99:51:51:1861:0:0:0,-10,-10 0/0:99:40:40:1451:0:0:0,-10,-10 0/0:99:26:26:979:0:0:0,-7.82678,-10 0/0:99:30:30:1103:0:0:0,-9.0309,-10 0/0:99:34:34:1191:0:0:0,-10,-10 0/0:80.2052:19:19:685:0:0:0,-5.71957,-10 0/0:65.1538:14:14:519:0:0:0,-4.21442,-10 0/0:80.2052:19:19:685:0:0:0,-5.71957,-10 0/0:44.0817:7:7:266:0:0:0,-2.10721,-10 0/0:99:28:28:1055:0:0:0,-8.42884,-10 0/0:99:34:34:1218:0:0:0,-10,-10 0/0:92.2471:23:23:851:0:0:0,-6.92369,-10 scaffold_6 6268523 . G A 2367.06 . AB=0.623932;ABP=18.6189;AC=8;AF=0.0449438;AN=178;AO=89;CIGAR=1X;DP=1923;DPB=1923;DPRA=0.870391;EPP=3.0347;EPPR=3.63698;GTI=2;LEN=1;MEANALT=1;MQM=59.9326;MQMR=59.982;NS=89;NUMALT=1;ODDS=0.0174065;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3274;QR=67408;RO=1833;RPP=187.683;RPPR=3752.25;RUN=1;SAF=46;SAP=3.22989;SAR=43;SRF=929;SRP=3.75071;SRR=904;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:87.5483:22:22:827:0:0:0,-6.62266,-10 0/0:69.487:16:16:578:0:0:0,-4.81648,-10 0/0:99:32:32:1204:0:0:0,-9.63296,-10 0/0:75.5076:18:18:648:0:0:0,-5.41854,-10 0/0:63.4664:14:14:529:0:0:0,-4.21442,-10 0/0:42.3943:7:7:259:0:0:0,-2.10721,-10 0/0:99:38:38:1440:0:0:0,-10,-10 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:51.4252:10:10:379:0:0:0,-3.0103,-10 0/0:39.384:6:6:228:0:0:0,-1.80618,-10 0/0:63.4664:14:14:523:0:0:0,-4.21442,-10 0/0:57.4458:12:12:433:0:0:0,-3.61236,-10 0/0:99:44:44:1579:0:0:0,-10,-10 0/0:99:35:35:1172:0:0:0,-10,-10 0/0:99:43:43:1596:0:0:0,-10,-10 0/0:99:37:37:1291:0:0:0,-10,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:78.5178:19:19:685:0:0:0,-5.71957,-10 0/0:66.4767:15:15:560:0:0:0,-4.51545,-10 0/0:99:31:31:1126:0:0:0,-9.33193,-10 0/0:72.4973:17:17:608:0:0:0,-5.11751,-10 0/0:99:36:36:1326:0:0:0,-10,-10 0/0:48.4149:9:9:308:0:0:0,-2.70927,-10 0/0:87.5483:22:22:807:0:0:0,-6.62266,-10 0/0:66.4767:15:15:542:0:0:0,-4.51545,-10 0/0:99:42:41:1507:0:0:0,-10,-10 0/0:72.4973:17:17:638:0:0:0,-5.11751,-10 0/0:84.5383:21:21:771:0:0:0,-6.32163,-10 0/0:99:29:29:1069:0:0:0,-8.72987,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:33.3634:4:4:152:0:0:0,-1.20412,-10 0/0:45.4046:8:8:294:0:0:0,-2.40824,-10 0/0:93.5676:24:24:908:0:0:0,-7.22472,-10 0/0:57.4458:12:12:433:0:0:0,-3.61236,-10 0/0:99:28:28:990:0:0:0,-8.42884,-10 0/0:69.487:16:16:567:0:0:0,-4.81648,-10 0/0:51.4252:10:10:369:0:0:0,-3.0103,-10 0/0:99:36:36:1296:0:0:0,-10,-10 0/0:60.4561:13:13:484:0:0:0,-3.91339,-10 0/0:51.4252:10:10:352:0:0:0,-3.0103,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:81.5281:20:20:728:0:0:0,-6.0206,-10 0/0:99:27:27:1022:0:0:0,-8.12781,-10 0/0:99:42:42:1531:0:0:0,-10,-10 0/0:72.4973:17:17:641:0:0:0,-5.11751,-10 0/0:81.5281:20:20:739:0:0:0,-6.0206,-10 0/0:99:40:40:1472:0:0:0,-10,-10 0/0:99:30:30:1070:0:0:0,-9.0309,-10 0/0:87.5483:22:22:814:0:0:0,-6.62266,-10 0/0:99:38:38:1417:0:0:0,-10,-10 0/0:54.4355:11:11:388:0:0:0,-3.31133,-10 0/0:99:37:37:1388:0:0:0,-10,-10 0/0:63.4664:14:14:519:0:0:0,-4.21442,-10 0/0:27.3428:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:43:43:1570:0:0:0,-10,-10 0/0:75.5076:18:18:678:0:0:0,-5.41854,-10 0/0:72.4973:17:17:617:0:0:0,-5.11751,-10 0/0:60.4561:13:13:471:0:0:0,-3.91339,-10 .:.:.:.:.:.:.:. 0/0:75.5076:18:18:679:0:0:0,-5.41854,-10 0/1:99:29:13:493:16:596:-10,0,-10 0/0:69.487:16:16:605:0:0:0,-4.81648,-10 0/0:99:37:37:1381:0:0:0,-10,-10 0/1:93.2111:12:2:76:10:376:-10,0,-5.42718 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:90.5593:23:23:860:0:0:0,-6.92369,-10 0/1:0.139959:10:0:0:10:361:-10,-3.0103,0 0/1:99:31:18:681:13:445:-10,0,-10 1/1:3.49572:16:0:0:16:606:-10,-4.81648,0 0/0:84.5383:21:21:736:0:0:0,-6.32163,-10 0/0:99:37:37:1386:0:0:0,-10,-10 0/0:90.5593:23:23:858:0:0:0,-6.92369,-10 0/0:75.5076:18:18:679:0:0:0,-5.41854,-10 0/0:99:27:27:1014:0:0:0,-8.12781,-10 0/1:0.284579:11:0:0:11:396:-10,-3.31133,0 0/0:66.4767:15:15:505:0:0:0,-4.51545,-10 0/0:54.4355:11:11:416:0:0:0,-3.31133,-10 0/0:45.4046:8:8:302:0:0:0,-2.40824,-10 0/0:66.4767:15:15:562:0:0:0,-4.51545,-10 0/0:99:39:39:1423:0:0:0,-10,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:78.5178:19:19:700:0:0:0,-5.71957,-10 0/0:84.5383:21:21:784:0:0:0,-6.32163,-10 0/1:99:24:11:408:13:494:-10,0,-10 0/0:42.3943:7:7:266:0:0:0,-2.10721,-10 0/0:72.4973:17:17:644:0:0:0,-5.11751,-10 0/0:57.4458:12:12:455:0:0:0,-3.61236,-10 0/0:39.384:6:6:228:0:0:0,-1.80618,-10 0/0:84.5383:21:21:771:0:0:0,-6.32163,-10 0/0:75.5076:18:18:662:0:0:0,-5.41854,-10 0/0:87.5483:22:22:831:0:0:0,-6.62266,-10 scaffold_6 6647209 . A AG 300.068 . AB=0.457143;ABP=3.56868;AC=2;AF=0.0108696;AN=184;AO=16;CIGAR=1M1I2M;DP=1701;DPB=1707.67;DPRA=0.945378;EPP=5.18177;EPPR=19.3015;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9862;NS=92;NUMALT=1;ODDS=10.0247;PAIRED=0;PAIREDR=0;PAO=1.5;PQA=52;PQR=52;PRO=1.5;QA=507;QR=60659;RO=1672;RPP=37.7539;RPPR=3616.36;RUN=1;SAF=10;SAP=5.18177;SAR=6;SRF=778;SRP=20.486;SRR=894;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:76.6506:15:14:513:0:0:0,-4.21442,-10 0|0:73.6403:13:13:467:0:0:0,-3.91339,-10 0|0:99:25:25:911:0:0:0,-7.52575,-10 0|0:55.5785:7:7:222:0:0:0,-2.10721,-10 0|0:70.63:12:12:427:0:0:0,-3.61236,-10 0|0:70.63:12:12:434:0:0:0,-3.61236,-10 0|0:99:36:35:1253:0:0:0,-10,-10 0|0:85.6815:17:17:617:0:0:0,-5.11751,-10 0|0:70.63:12:12:434:0:0:0,-3.61236,-10 0|0:52.5682:6:6:225:0:0:0,-1.80618,-10 0|0:61.5991:9:9:315:0:0:0,-2.70927,-10 0|0:64.6094:10:10:370:0:0:0,-3.0103,-10 0|0:99:28:28:1046:0:0:0,-8.42884,-10 0|0:99:38:38:1405:0:0:0,-10,-10 0|0:99:29:29:1047:0:0:0,-8.72987,-10 0|0:82.6712:16:16:603:0:0:0,-4.81648,-10 0|0:99:28:28:1003:0:0:0,-8.42884,-10 0|0:61.5991:9:9:326:0:0:0,-2.70927,-10 0|0:99:24:24:900:0:0:0,-7.22472,-10 0|0:99:43:43:1526:0:0:0,-10,-10 0|0:79.6609:15:15:562:0:0:0,-4.51545,-10 0|0:99:41:41:1537:0:0:0,-10,-10 0|0:52.5682:6:6:223:0:0:0,-1.80618,-10 0|0:70.63:12:12:445:0:0:0,-3.61236,-10 0|0:94.7124:20:20:745:0:0:0,-6.0206,-10 0|0:99:23:23:807:0:0:0,-6.92369,-10 0|0:97.7227:23:21:793:0:0:0,-6.32163,-10 0|0:79.6609:15:15:509:0:0:0,-4.51545,-10 0|0:94.7124:20:20:726:0:0:0,-6.0206,-10 0|0:99:33:33:1236:0:0:0,-9.93399,-10 0|0:49.5579:6:5:173:0:0:0,-1.50515,-10 0|0:58.5888:8:8:295:0:0:0,-2.40824,-10 0|0:97.7227:21:21:722:0:0:0,-6.32163,-10 0|0:64.6094:10:10:376:0:0:0,-3.0103,-10 0|0:85.6815:18:17:595:0:0:0,-5.11751,-10 0|0:55.5785:7:7:253:0:0:0,-2.10721,-10 0|0:88.6918:18:18:655:0:0:0,-5.41854,-10 0|1:99:21:10:369:11:375:-10,0,-10 0|0:97.7227:21:21:739:0:0:0,-6.32163,-10 0|1:68.4815:14:9:339:5:132:-10,0,-10 0|0:99:31:30:1121:0:0:0,-9.0309,-10 0|0:85.6815:17:17:583:0:0:0,-5.11751,-10 0|0:49.5579:5:5:179:0:0:0,-1.50515,-10 0|0:99:33:33:1188:0:0:0,-9.93399,-10 0|0:88.6918:19:18:621:0:0:0,-5.41854,-10 0|0:73.6403:13:13:464:0:0:0,-3.91339,-10 0|0:99:35:35:1271:0:0:0,-10,-10 0|0:97.7227:21:21:766:0:0:0,-6.32163,-10 0|0:88.6918:18:18:667:0:0:0,-5.41854,-10 0|0:99:25:25:915:0:0:0,-7.52575,-10 0|0:70.63:12:12:426:0:0:0,-3.61236,-10 0|0:99:43:43:1528:0:0:0,-10,-10 0|0:70.63:13:12:427:0:0:0,-3.61236,-10 0|0:43.5373:3:3:114:0:0:0,-0.90309,-10 0|0:99:33:32:1166:0:0:0,-9.63296,-10 0|0:61.5991:9:9:331:0:0:0,-2.70927,-10 0|0:94.7124:20:20:711:0:0:0,-6.0206,-10 0|0:55.5785:7:7:256:0:0:0,-2.10721,-10 0|0:85.6815:17:17:615:0:0:0,-5.11751,-10 0|0:76.6506:14:14:500:0:0:0,-4.21442,-10 0|0:99:26:26:950:0:0:0,-7.82678,-10 0|0:82.6712:16:16:585:0:0:0,-4.81648,-10 0|0:99:38:38:1365:0:0:0,-10,-10 0|0:97.7227:21:21:783:0:0:0,-6.32163,-10 0|0:88.6918:18:18:651:0:0:0,-5.41854,-10 0|0:99:39:39:1439:0:0:0,-10,-10 0|0:67.6197:11:11:409:0:0:0,-3.31133,-10 0|0:58.5888:8:8:276:0:0:0,-2.40824,-10 0|0:99:40:40:1467:0:0:0,-10,-10 0|0:61.5991:9:9:337:0:0:0,-2.70927,-10 0|0:73.6403:13:13:477:0:0:0,-3.91339,-10 0|0:94.7124:21:20:739:0:0:0,-6.0206,-10 0|0:76.6506:14:14:500:0:0:0,-4.21442,-10 0|0:88.6918:19:18:660:0:0:0,-5.41854,-10 0|0:99:26:26:941:0:0:0,-7.82678,-10 0|0:76.6506:14:14:487:0:0:0,-4.21442,-10 0|0:64.6094:10:10:366:0:0:0,-3.0103,-10 0|0:64.6094:10:10:352:0:0:0,-3.0103,-10 0|0:61.5991:9:9:317:0:0:0,-2.70927,-10 0|0:73.6403:13:13:473:0:0:0,-3.91339,-10 0|0:99:27:27:975:0:0:0,-8.12781,-10 0|0:88.6918:18:18:643:0:0:0,-5.41854,-10 0|0:91.7021:19:19:697:0:0:0,-5.71957,-10 0|0:82.6712:16:16:598:0:0:0,-4.81648,-10 0|0:91.7021:19:19:666:0:0:0,-5.71957,-10 0|0:61.5991:9:9:329:0:0:0,-2.70927,-10 0|0:94.7124:20:20:685:0:0:0,-6.0206,-10 0|0:67.6197:11:11:406:0:0:0,-3.31133,-10 0|0:58.5888:8:8:265:0:0:0,-2.40824,-10 0|0:88.6918:19:18:668:0:0:0,-5.41854,-10 0|0:67.6197:11:11:416:0:0:0,-3.31133,-10 0|0:94.7124:20:20:745:0:0:0,-6.0206,-10 scaffold_6 6764748 . C T 20987.1 . AB=0.487759;ABP=3.70141;AC=89;AF=0.483696;AN=184;AO=732;CIGAR=1X;DP=1627;DPB=1627;DPRA=0.992131;EPP=3.30695;EPPR=8.36983;GTI=1;LEN=1;MEANALT=1;MQM=59.4317;MQMR=59.5866;NS=92;NUMALT=1;ODDS=0.0627803;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=26822;QR=33032;RO=895;RPP=1557.97;RPPR=1894.71;RUN=1;SAF=357;SAP=3.97144;SAR=375;SRF=418;SRP=11.456;SRR=477;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:42.9123:16:0:0:16:561:-10,-4.81648,0 1/1:9.79897:5:0:0:5:189:-10,-1.50515,0 0/1:91.4326:13:10:380:3:114:-9.18298,0,-10 0/0:39.2537:11:11:415:0:0:0,-3.31133,-10 0/1:49.5405:3:1:38:2:75:-6.69903,0,-3.37403 0/0:21.1919:5:5:168:0:0:0,-1.50515,-10 0/0:99:38:38:1423:0:0:0,-10,-10 0/1:99:28:16:600:12:444:-10,0,-10 1/1:30.8711:12:0:0:12:448:-10,-3.61236,0 0/0:15.1713:3:3:114:0:0:0,-0.90309,-10 0/1:0.826975:4:0:0:4:150:-10,-1.20412,0 0/0:33.2331:9:9:296:0:0:0,-2.70927,-10 1/1:79.0358:28:0:0:28:1052:-10,-8.42884,0 0/1:99:41:23:867:18:660:-10,0,-10 0/0:57.3155:17:17:641:0:0:0,-5.11751,-10 0/0:69.3567:21:21:793:0:0:0,-6.32163,-10 0/0:69.3567:21:21:781:0:0:0,-6.32163,-10 0/0:21.1919:5:5:180:0:0:0,-1.50515,-10 1/1:45.9226:17:0:0:17:637:-10,-5.11751,0 0/0:99:33:33:1181:0:0:0,-9.93399,-10 0/1:99:9:5:189:4:151:-10,0,-10 0/0:81.3978:25:25:913:0:0:0,-7.52575,-10 1/1:21.8402:9:0:0:9:313:-10,-2.70927,0 1/1:66.9947:24:0:0:24:874:-10,-7.22472,0 1/1:54.9535:20:0:0:20:730:-10,-6.0206,0 0/1:99:21:14:514:7:261:-10,0,-10 1/1:15.8196:7:0:0:7:259:-10,-2.10721,0 1/1:27.8608:11:0:0:11:383:-10,-3.31133,0 1/1:31.3924:27:1:33:26:963:-10,-3.39645,0 0/1:99:37:19:707:18:651:-10,0,-10 1/1:12.8093:6:0:0:6:206:-10,-1.80618,0 1/1:21.8402:9:0:0:9:307:-10,-2.70927,0 0/0:54.3052:16:16:592:0:0:0,-4.81648,-10 0/0:33.2331:9:9:342:0:0:0,-2.70927,-10 1/1:39.902:15:0:0:15:548:-10,-4.51545,0 0/0:39.2537:11:11:414:0:0:0,-3.31133,-10 0/0:57.3155:17:17:634:0:0:0,-5.11751,-10 0/1:99:25:16:607:9:322:-10,0,-10 1/1:33.8814:13:0:0:13:458:-10,-3.91339,0 1/1:24.8505:10:0:0:10:366:-10,-3.0103,0 0/1:99:20:8:297:12:452:-10,0,-10 0/0:72.367:22:22:821:0:0:0,-6.62266,-10 1/1:48.9329:18:0:0:18:648:-10,-5.41854,0 0/0:96.446:30:30:1094:0:0:0,-9.0309,-10 0/1:99:26:8:287:18:657:-10,0,-10 0/1:99:16:4:145:12:455:-10,0,-10 0/1:99:27:13:481:14:525:-10,0,-10 0/1:99:15:9:339:6:205:-10,0,-10 1/1:15.8196:7:0:0:7:266:-10,-2.10721,0 1/1:99:36:0:0:36:1317:-10,-10,0 1/1:27.8608:11:0:0:11:391:-10,-3.31133,0 1/1:99:37:0:0:37:1380:-10,-10,0 1/1:48.9329:18:0:0:18:676:-10,-5.41854,0 0/0:33.2331:9:9:340:0:0:0,-2.70927,-10 0/1:99:48:27:999:21:753:-10,0,-10 1/1:39.902:15:0:0:15:538:-10,-4.51545,0 0/1:17.7181:16:1:38:15:555:-10,0,-0.18764 1/1:15.8196:7:0:0:7:253:-10,-2.10721,0 0/0:57.3155:17:17:624:0:0:0,-5.11751,-10 1/1:15.8196:7:0:0:7:244:-10,-2.10721,0 1/1:48.9329:18:0:0:18:645:-10,-5.41854,0 1/1:15.8196:7:0:0:7:266:-10,-2.10721,0 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/1:99:20:9:339:11:399:-10,0,-10 0/0:39.2537:11:11:418:0:0:0,-3.31133,-10 0/0:99:38:38:1401:0:0:0,-10,-10 0/1:99:17:12:429:5:190:-10,0,-10 0/0:33.2331:9:9:331:0:0:0,-2.70927,-10 0/1:99:26:15:548:11:405:-10,0,-10 0/0:42.264:12:12:455:0:0:0,-3.61236,-10 0/0:87.4181:27:27:1012:0:0:0,-8.12781,-10 0/0:99:33:33:1237:0:0:0,-9.93399,-10 0/0:57.3155:17:17:612:0:0:0,-5.11751,-10 0/0:66.3464:20:20:741:0:0:0,-6.0206,-10 0/0:84.408:26:26:984:0:0:0,-7.82678,-10 0/0:39.2537:11:11:388:0:0:0,-3.31133,-10 0/0:27.2125:7:7:257:0:0:0,-2.10721,-10 1/1:39.902:15:0:0:15:560:-10,-4.51545,0 1/1:6.78867:4:0:0:4:145:-10,-1.20412,0 0/0:42.264:12:12:451:0:0:0,-3.61236,-10 0/1:99:47:18:649:29:1086:-10,0,-10 0/1:99:29:21:735:8:304:-10,0,-10 0/0:75.3773:23:23:836:0:0:0,-6.92369,-10 1/1:27.8608:11:0:0:11:417:-10,-3.31133,0 0/1:99:18:11:405:7:266:-10,0,-10 0/0:18.1816:4:4:150:0:0:0,-1.20412,-10 0/0:69.3567:21:21:740:0:0:0,-6.32163,-10 1/1:39.902:15:0:0:15:555:-10,-4.51545,0 0/1:37.6478:4:3:114:1:38:-3.19794,0,-10 0/1:99:9:3:114:6:197:-10,0,-9.85501 0/1:99:12:6:219:6:226:-10,0,-10 1/1:51.9432:19:0:0:19:686:-10,-5.71957,0 scaffold_6 6827726 . T C 23696.8 . AB=0.518957;ABP=4.32759;AC=97;AF=0.527174;AN=184;AO=815;CIGAR=1X;DP=1523;DPB=1523;DPRA=1.21168;EPP=11.6669;EPPR=3.89793;GTI=1;LEN=1;MEANALT=1;MQM=59.9252;MQMR=59.976;NS=92;NUMALT=1;ODDS=0.687112;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=30018;QR=25986;RO=707;RPP=1721.03;RPPR=1486.57;RUN=1;SAF=442;SAP=15.6954;SAR=373;SRF=368;SRP=5.59334;SRR=339;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:32.065:11:0:0:11:395:-10,-3.31133,0 0/0:12.6776:6:6:226:0:0:0,-1.80618,-10 1/1:59.1577:20:0:0:20:715:-10,-6.0206,0 0/0:39.7703:15:15:563:0:0:0,-4.51545,-10 0/1:97.3064:10:3:109:7:266:-10,0,-9.24221 1/1:26.0444:9:0:0:9:335:-10,-2.70927,0 0/1:99:30:16:593:14:527:-10,0,-10 0/1:99:16:6:223:10:360:-10,0,-10 0/0:21.7085:9:9:319:0:0:0,-2.70927,-10 0/1:0.537507:3:3:90:0:0:0,-0.90309,-8.4 1/1:23.0341:8:0:0:8:304:-10,-2.40824,0 0/0:12.6776:6:6:216:0:0:0,-1.80618,-10 1/1:71.1989:24:0:0:24:885:-10,-7.22472,0 1/1:71.1989:24:0:0:24:911:-10,-7.22472,0 0/0:72.8836:26:26:947:0:0:0,-7.82678,-10 0/0:60.8424:22:22:781:0:0:0,-6.62266,-10 1/1:77.2194:26:0:0:26:954:-10,-7.82678,0 1/1:32.065:11:0:0:11:417:-10,-3.31133,0 1/1:74.2092:25:0:0:25:880:-10,-7.52575,0 0/1:99:26:11:404:15:544:-10,0,-10 1/1:65.1783:22:0:0:22:807:-10,-6.62266,0 0/1:99:25:10:355:15:567:-10,0,-10 1/1:20.0238:7:0:0:7:261:-10,-2.10721,0 0/1:99:16:6:228:10:370:-10,0,-10 1/1:38.0856:13:0:0:13:494:-10,-3.91339,0 0/1:99:16:9:341:7:257:-10,0,-10 1/1:47.1165:16:0:0:16:574:-10,-4.81648,0 1/1:35.0753:12:0:0:12:404:-10,-3.61236,0 1/1:41.0959:14:0:0:14:532:-10,-4.21442,0 1/1:59.1577:20:0:0:20:751:-10,-6.0206,0 1/1:14.0032:5:0:0:5:185:-10,-1.50515,0 1/1:20.0238:7:0:0:7:240:-10,-2.10721,0 0/0:39.7703:15:15:562:0:0:0,-4.51545,-10 1/1:38.0856:13:0:0:13:484:-10,-3.91339,0 1/1:62.168:21:0:0:21:791:-10,-6.32163,0 0/0:9.6673:5:5:190:0:0:0,-1.50515,-10 0/0:27.7291:11:11:416:0:0:0,-3.31133,-10 0/1:99:28:13:470:15:542:-10,0,-10 1/1:41.0959:14:0:0:14:527:-10,-4.21442,0 1/1:65.1783:22:0:0:22:828:-10,-6.62266,0 1/1:98.2891:33:0:0:33:1229:-10,-9.93399,0 0/1:31.2916:11:10:368:1:38:-1.53006,0,-10 1/1:59.1577:20:0:0:20:711:-10,-6.0206,0 0/1:99:19:12:454:7:266:-10,0,-10 0/1:99:17:8:302:9:333:-10,0,-10 0/1:73.9916:6:2:76:4:152:-10,0,-6.58991 0/1:99:34:19:698:15:539:-10,0,-10 1/1:59.1577:20:0:0:20:747:-10,-6.0206,0 1/1:26.0444:9:0:0:9:319:-10,-2.70927,0 1/1:99:39:0:0:39:1401:-10,-10,0 0/0:21.7085:9:9:331:0:0:0,-2.70927,-10 0/1:99:25:11:415:14:531:-10,0,-10 1/1:29.0547:10:0:0:10:378:-10,-3.0103,0 1/1:26.0444:9:0:0:9:340:-10,-2.70927,0 0/1:99:26:8:243:18:650:-10,0,-10 1/1:26.0444:9:0:0:9:342:-10,-2.70927,0 1/1:50.1268:17:0:0:17:627:-10,-5.11751,0 1/1:44.1062:15:0:0:15:563:-10,-4.51545,0 0/0:27.7291:11:11:417:0:0:0,-3.31133,-10 1/1:8.77835:11:1:16:10:376:-10,-0.669937,0 0/1:99:27:12:430:15:567:-10,0,-10 0/0:69.8733:26:25:924:0:0:0,-7.52575,-10 0/1:99:29:18:658:11:391:-10,0,-10 0/0:33.7497:13:13:490:0:0:0,-3.91339,-10 0/0:24.7188:10:10:377:0:0:0,-3.0103,-10 0/0:69.8733:25:25:915:0:0:0,-7.52575,-10 1/1:23.0341:8:0:0:8:301:-10,-2.40824,0 0/0:27.7291:11:11:411:0:0:0,-3.31133,-10 0/0:40.1992:32:31:1120:1:38:0,-4.32781,-10 0/0:27.7291:11:11:410:0:0:0,-3.31133,-10 0/0:27.7291:11:11:386:0:0:0,-3.31133,-10 0/0:63.8527:23:23:858:0:0:0,-6.92369,-10 0/0:45.7909:17:17:634:0:0:0,-5.11751,-10 0/0:42.7806:16:16:593:0:0:0,-4.81648,-10 0/0:54.8218:20:20:752:0:0:0,-6.0206,-10 0/0:9.6673:5:5:190:0:0:0,-1.50515,-10 1/1:41.0959:14:0:0:14:503:-10,-4.21442,0 0/0:24.7188:10:10:380:0:0:0,-3.0103,-10 0/0:15.6879:7:7:256:0:0:0,-2.10721,-10 0/0:18.6982:8:8:300:0:0:0,-2.40824,-10 0/0:54.8218:20:20:729:0:0:0,-6.0206,-10 0/1:99:26:14:531:12:449:-10,0,-10 0/0:81.9144:29:29:1078:0:0:0,-8.72987,-10 0/0:54.8218:20:20:729:0:0:0,-6.0206,-10 0/1:99:27:12:434:15:568:-10,0,-10 1/1:20.0238:7:0:0:7:266:-10,-2.10721,0 1/1:41.0959:14:0:0:14:483:-10,-4.21442,0 1/1:50.1268:17:0:0:17:623:-10,-5.11751,0 0/1:99:8:3:114:5:180:-10,0,-9.97995 0/0:42.7806:16:16:590:0:0:0,-4.81648,-10 0/0:57.8321:21:21:740:0:0:0,-6.32163,-10 0/0:42.7806:16:16:604:0:0:0,-4.81648,-10 scaffold_6 7064864 . G A 253.999 . AB=0.611111;ABP=4.9405;AC=1;AF=0.00549451;AN=182;AO=11;CIGAR=1X;DP=2101;DPB=2101;DPRA=0.777724;EPP=7.94546;EPPR=30.9548;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9933;NS=91;NUMALT=1;ODDS=11.931;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=407;QR=76317;RO=2090;RPP=26.8965;RPPR=4541.39;RUN=1;SAF=3;SAP=7.94546;SAR=8;SRF=1127;SRP=30.9548;SRR=963;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:20:20:731:0:0:0,-6.0206,-10 0/0:78.9084:12:12:446:0:0:0,-3.61236,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:96.9702:18:18:675:0:0:0,-5.41854,-10 0/1:99:18:7:252:11:407:-10,0,-10 0/0:81.9185:13:13:440:0:0:0,-3.91339,-10 0/0:99:44:44:1568:0:0:0,-10,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:78.9084:12:12:452:0:0:0,-3.61236,-10 0/0:57.8363:5:5:190:0:0:0,-1.50515,-10 0/0:81.9185:13:13:488:0:0:0,-3.91339,-10 0/0:72.8877:10:10:380:0:0:0,-3.0103,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:99:39:39:1428:0:0:0,-10,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:99:29:29:1071:0:0:0,-8.72987,-10 0/0:99:30:30:1043:0:0:0,-9.0309,-10 0/0:75.8981:11:11:394:0:0:0,-3.31133,-10 0/0:99:26:26:969:0:0:0,-7.82678,-10 0/0:99:37:37:1354:0:0:0,-10,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:99:43:43:1597:0:0:0,-10,-10 0/0:96.9702:18:18:679:0:0:0,-5.41854,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:99:20:20:754:0:0:0,-6.0206,-10 0/0:99:20:20:728:0:0:0,-6.0206,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:78.9084:12:12:450:0:0:0,-3.61236,-10 0/0:63.8569:7:7:262:0:0:0,-2.10721,-10 0/0:99:22:22:769:0:0:0,-6.62266,-10 0/0:75.8981:11:11:404:0:0:0,-3.31133,-10 0/0:75.8981:11:11:413:0:0:0,-3.31133,-10 0/0:69.8775:9:9:312:0:0:0,-2.70927,-10 0/0:90.9484:16:16:593:0:0:0,-4.81648,-10 0/0:99:35:35:1238:0:0:0,-10,-10 0/0:99:19:19:700:0:0:0,-5.71957,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:99:31:31:1121:0:0:0,-9.33193,-10 0/0:99:20:20:731:0:0:0,-6.0206,-10 0/0:99:29:29:1076:0:0:0,-8.72987,-10 0/0:99:34:34:1254:0:0:0,-10,-10 0/0:99:19:19:694:0:0:0,-5.71957,-10 0/0:78.9084:12:12:411:0:0:0,-3.61236,-10 0/0:99:51:51:1868:0:0:0,-10,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:87.9393:15:15:564:0:0:0,-4.51545,-10 0/0:99:44:44:1603:0:0:0,-10,-10 0/0:99:19:19:704:0:0:0,-5.71957,-10 0/0:99:43:43:1572:0:0:0,-10,-10 0/0:99:19:19:717:0:0:0,-5.71957,-10 0/0:66.8672:8:8:277:0:0:0,-2.40824,-10 0/0:99:56:56:2072:0:0:0,-10,-10 0/0:93.9574:17:17:621:0:0:0,-5.11751,-10 0/0:99:28:28:1028:0:0:0,-8.42884,-10 0/0:57.8363:5:5:180:0:0:0,-1.50515,-10 0/0:99:20:20:701:0:0:0,-6.0206,-10 0/0:87.9393:15:15:547:0:0:0,-4.51545,-10 0/0:99:37:37:1360:0:0:0,-10,-10 0/0:99:21:21:768:0:0:0,-6.32163,-10 0/0:99:47:47:1726:0:0:0,-10,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 0/0:66.8672:8:8:302:0:0:0,-2.40824,-10 0/0:99:35:35:1213:0:0:0,-10,-10 0/0:99:31:31:1123:0:0:0,-9.33193,-10 0/0:99:23:23:832:0:0:0,-6.92369,-10 0/0:99:44:44:1604:0:0:0,-10,-10 0/0:81.9185:13:13:471:0:0:0,-3.91339,-10 0/0:90.9484:16:16:572:0:0:0,-4.81648,-10 0/0:99:37:37:1362:0:0:0,-10,-10 0/0:99:30:30:1127:0:0:0,-9.0309,-10 .:.:.:.:.:.:.:. 0/0:75.8981:11:11:396:0:0:0,-3.31133,-10 0/0:96.9702:18:18:656:0:0:0,-5.41854,-10 0/0:93.9574:17:17:596:0:0:0,-5.11751,-10 0/0:90.9484:16:16:583:0:0:0,-4.81648,-10 0/0:57.8363:5:5:188:0:0:0,-1.50515,-10 0/0:84.9287:14:14:467:0:0:0,-4.21442,-10 0/0:99:56:56:2037:0:0:0,-10,-10 0/0:99:38:38:1354:0:0:0,-10,-10 0/0:99:26:26:955:0:0:0,-7.82678,-10 0/0:99:20:20:756:0:0:0,-6.0206,-10 0/0:99:22:22:758:0:0:0,-6.62266,-10 0/0:51.8157:3:3:90:0:0:0,-0.90309,-8.4 0/0:81.9185:13:13:484:0:0:0,-3.91339,-10 0/0:99:19:19:710:0:0:0,-5.71957,-10 0/0:69.8775:9:9:339:0:0:0,-2.70927,-10 0/0:99:19:19:688:0:0:0,-5.71957,-10 0/0:99:19:19:715:0:0:0,-5.71957,-10 0/0:57.8363:5:5:188:0:0:0,-1.50515,-10 scaffold_6 7084107 . T G 1981.86 . AB=0.554622;ABP=6.09416;AC=8;AF=0.0434783;AN=184;AO=81;CIGAR=1X;DP=1215;DPB=1215;DPRA=1.52083;EPP=7.5409;EPPR=3.7034;GTI=1;LEN=1;MEANALT=1.11111;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.671032;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2870;QR=40667;RO=1131;RPP=178.9;RPPR=2364.33;RUN=1;SAF=47;SAP=7.5409;SAR=34;SRF=545;SRP=6.23775;SRR=586;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.9949:14:14:519:0:0:0,-4.21442,-10 0/0:11.8713:2:2:69:0:0:0,-0.60206,-6.555 0/0:54.0155:16:16:562:0:0:0,-4.81648,-10 0/0:38.964:11:11:360:0:0:0,-3.31133,-10 0/0:44.9846:13:13:469:0:0:0,-3.91339,-10 0/0:29.9331:8:8:289:0:0:0,-2.40824,-10 0/0:57.0258:17:17:638:0:0:0,-5.11751,-10 0/0:44.9846:13:13:473:0:0:0,-3.91339,-10 0/0:44.9846:13:13:482:0:0:0,-3.91339,-10 0/0:11.8713:2:2:76:0:0:0,-0.60206,-7.22 0/0:17.8919:4:4:152:0:0:0,-1.20412,-10 0/0:17.8919:4:4:137:0:0:0,-1.20412,-10 0/0:57.0258:17:17:626:0:0:0,-5.11751,-10 0/0:66.0567:20:20:730:0:0:0,-6.0206,-10 0/0:29.9331:8:8:293:0:0:0,-2.40824,-10 0/0:66.0567:20:20:689:0:0:0,-6.0206,-10 0/0:47.9949:14:14:526:0:0:0,-4.21442,-10 0/0:41.9743:12:12:406:0:0:0,-3.61236,-10 0/0:44.9846:13:13:427:0:0:0,-3.91339,-10 0/0:63.0464:19:19:644:0:0:0,-5.71957,-10 0/0:41.9743:12:12:444:0:0:0,-3.61236,-10 0/0:44.9846:13:13:463:0:0:0,-3.91339,-10 0/0:20.9022:5:5:181:0:0:0,-1.50515,-10 0/0:51.0052:15:15:555:0:0:0,-4.51545,-10 0/0:47.9949:14:14:508:0:0:0,-4.21442,-10 0/0:57.0258:17:17:610:0:0:0,-5.11751,-10 0/0:29.9331:8:8:295:0:0:0,-2.40824,-10 0/1:14.0935:11:10:361:1:36:-1.33006,0,-10 0/0:21.7119:12:11:392:1:15:0,-1.03318,-10 0/1:99:25:10:371:15:559:-10,0,-10 0/0:14.8816:3:3:110:0:0:0,-0.90309,-10 0/0:23.9125:6:6:214:0:0:0,-1.80618,-10 0/0:29.9331:8:8:302:0:0:0,-2.40824,-10 0/0:38.964:11:11:382:0:0:0,-3.31133,-10 0/0:57.0258:17:17:643:0:0:0,-5.11751,-10 0/0:11.8713:2:2:76:0:0:0,-0.60206,-7.22 0/0:38.964:11:11:413:0:0:0,-3.31133,-10 0/0:81.1082:25:25:892:0:0:0,-7.52575,-10 0/0:41.9743:12:12:441:0:0:0,-3.61236,-10 0/0:29.9331:8:8:298:0:0:0,-2.40824,-10 0/0:57.0258:17:17:594:0:0:0,-5.11751,-10 0/0:66.0567:20:20:680:0:0:0,-6.0206,-10 0/0:38.964:11:11:384:0:0:0,-3.31133,-10 0/0:63.0464:19:19:672:0:0:0,-5.71957,-10 0/0:35.9537:11:10:376:0:0:0,-3.0103,-10 0/0:14.8816:3:3:110:0:0:0,-0.90309,-10 0/1:99:32:13:451:19:676:-10,0,-10 0/1:99:16:5:169:11:384:-10,0,-10 0/0:23.9125:6:6:227:0:0:0,-1.80618,-10 0/0:78.0979:24:24:869:0:0:0,-7.22472,-10 0/0:29.9331:8:8:296:0:0:0,-2.40824,-10 0/0:69.067:21:21:716:0:0:0,-6.32163,-10 0/0:23.9125:6:6:226:0:0:0,-1.80618,-10 0/1:0.0686443:4:0:0:4:129:-10,-1.20412,0 0/1:99:31:15:518:16:577:-10,0,-10 0/0:35.9537:10:10:345:0:0:0,-3.0103,-10 0/0:51.0052:15:15:520:0:0:0,-4.51545,-10 0/0:17.8919:4:4:151:0:0:0,-1.20412,-10 0/0:47.9949:14:14:520:0:0:0,-4.21442,-10 0/0:35.9537:11:10:353:0:0:0,-3.0103,-10 0/0:69.067:21:21:790:0:0:0,-6.32163,-10 0/0:44.9846:13:13:491:0:0:0,-3.91339,-10 0/0:81.1082:25:25:926:0:0:0,-7.52575,-10 0/0:47.9949:14:14:514:0:0:0,-4.21442,-10 0/0:51.0052:15:15:525:0:0:0,-4.51545,-10 0/0:57.0258:17:17:637:0:0:0,-5.11751,-10 0/0:47.9949:14:14:468:0:0:0,-4.21442,-10 0/0:26.9228:7:7:255:0:0:0,-2.10721,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:47.9949:14:14:474:0:0:0,-4.21442,-10 0/0:54.0155:16:16:601:0:0:0,-4.81648,-10 0/0:81.1082:25:25:916:0:0:0,-7.52575,-10 0/0:69.067:21:21:732:0:0:0,-6.32163,-10 0/0:41.9743:12:12:448:0:0:0,-3.61236,-10 0/0:66.0567:20:20:707:0:0:0,-6.0206,-10 0/0:26.9228:7:7:237:0:0:0,-2.10721,-10 0/0:32.9434:9:9:288:0:0:0,-2.70927,-10 0/0:44.9846:13:13:465:0:0:0,-3.91339,-10 0/0:8.86098:1:1:38:0:0:0,-0.30103,-3.8 0/0:17.8919:4:4:152:0:0:0,-1.20412,-10 0/0:63.3446:27:26:942:1:15:0,-5.19645,-10 0/0:75.0876:23:23:849:0:0:0,-6.92369,-10 0/0:47.9949:14:14:513:0:0:0,-4.21442,-10 0/0:47.9949:14:14:513:0:0:0,-4.21442,-10 0/0:51.0052:15:15:560:0:0:0,-4.51545,-10 0/0:17.8919:4:4:152:0:0:0,-1.20412,-10 1/1:9.47087:14:0:0:13:479:-10,-3.91339,0 0/0:44.9846:13:13:466:0:0:0,-3.91339,-10 0/0:11.8713:2:2:75:0:0:0,-0.60206,-7.125 0/0:38.964:11:11:367:0:0:0,-3.31133,-10 0/0:41.9743:12:12:432:0:0:0,-3.61236,-10 0/0:26.9228:7:7:241:0:0:0,-2.10721,-10 scaffold_6 7104436 . T C 24876.2 . AB=0.45933;ABP=9.01562;AC=120;AF=0.652174;AN=184;AO=870;CIGAR=1X;DP=1381;DPB=1381;DPRA=1.17117;EPP=5.56615;EPPR=4.10029;GTI=1;LEN=1;MEANALT=1.01429;MQM=59.9483;MQMR=59.9588;NS=92;NUMALT=1;ODDS=0.462006;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=31499;QR=18455;RO=510;RPP=1892.19;RPPR=1110.46;RUN=1;SAF=419;SAP=5.56615;SAR=451;SRF=263;SRP=4.10029;SRR=247;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:31.8369:10:0:0:10:366:-10,-3.0103,0 1/1:52.909:17:0:0:17:613:-10,-5.11751,0 1/1:46.8884:15:0:0:15:554:-10,-4.51545,0 1/1:43.8781:14:0:0:14:512:-10,-4.21442,0 0/1:99:16:9:327:7:240:-10,0,-10 0/0:9.14754:4:4:152:0:0:0,-1.20412,-10 1/1:38.4042:20:1:14:19:684:-10,-3.31957,0 0/1:99:22:9:332:13:491:-10,0,-10 1/1:46.8884:15:0:0:15:556:-10,-4.51545,0 0/0:9.14754:4:4:144:0:0:0,-1.20412,-10 1/1:16.7854:5:0:0:5:168:-10,-1.50515,0 1/1:19.7957:6:0:0:6:205:-10,-1.80618,0 1/1:70.9708:23:0:0:23:864:-10,-6.92369,0 0/1:99:33:18:664:15:562:-10,0,-10 1/1:86.0223:28:0:0:28:1014:-10,-8.42884,0 1/1:46.8884:15:0:0:15:551:-10,-4.51545,0 1/1:61.9399:20:0:0:20:749:-10,-6.0206,0 0/1:0.648714:3:3:114:0:0:0,-0.90309,-10 1/1:40.8678:13:0:0:13:483:-10,-3.91339,0 0/1:99:20:12:431:8:289:-10,0,-10 0/1:99:12:7:266:5:190:-10,0,-10 0/1:99:27:16:588:10:376:-10,0,-10 1/1:13.7751:4:0:0:4:144:-10,-1.20412,0 0/1:99:10:6:221:4:130:-10,0,-10 1/1:49.8987:16:0:0:16:594:-10,-4.81648,0 0/1:99:18:8:301:10:375:-10,0,-10 1/1:49.8987:16:0:0:16:583:-10,-4.81648,0 1/1:13.7751:4:0:0:4:143:-10,-1.20412,0 0/0:54.302:19:19:695:0:0:0,-5.71957,-10 0/1:99:32:14:501:18:653:-10,0,-10 1/1:28.8266:9:0:0:9:329:-10,-2.70927,0 1/1:22.806:7:0:0:7:230:-10,-2.10721,0 0/0:42.2608:15:15:521:0:0:0,-4.51545,-10 1/1:16.7854:5:0:0:5:181:-10,-1.50515,0 1/1:49.8987:16:0:0:16:579:-10,-4.81648,0 0/0:18.1784:7:7:262:0:0:0,-2.10721,-10 0/0:30.2196:11:11:416:0:0:0,-3.31133,-10 1/1:67.9605:22:0:0:22:776:-10,-6.62266,0 1/1:16.7854:5:0:0:5:187:-10,-1.50515,0 1/1:25.8163:8:0:0:8:291:-10,-2.40824,0 1/1:73.9811:24:0:0:24:883:-10,-7.22472,0 0/0:48.2814:17:17:611:0:0:0,-5.11751,-10 0/0:60.3226:21:21:707:0:0:0,-6.32163,-10 0/1:99:24:17:635:7:266:-10,0,-10 1/1:61.9399:20:0:0:20:727:-10,-6.0206,0 0/1:99:12:7:262:5:180:-10,0,-10 0/1:99:33:20:711:13:477:-10,0,-10 0/1:99:17:10:307:7:266:-10,0,-10 1/1:61.9399:20:0:0:20:722:-10,-6.0206,0 1/1:83.012:27:0:0:27:962:-10,-8.12781,0 1/1:49.8987:16:0:0:16:547:-10,-4.81648,0 0/0:81.3946:28:28:1043:0:0:0,-8.42884,-10 1/1:40.8678:13:0:0:13:454:-10,-3.91339,0 0/0:21.1887:8:8:297:0:0:0,-2.40824,-10 0/1:99:28:16:564:12:429:-10,0,-10 1/1:37.8575:12:0:0:12:429:-10,-3.61236,0 1/1:43.8781:14:0:0:14:521:-10,-4.21442,0 1/1:46.8884:15:0:0:15:541:-10,-4.51545,0 0/0:36.2402:13:13:480:0:0:0,-3.91339,-10 1/1:31.8369:10:0:0:10:332:-10,-3.0103,0 0/1:99:23:8:280:15:534:-10,0,-10 1/1:58.9296:19:0:0:19:685:-10,-5.71957,0 0/1:99:23:7:265:16:577:-10,0,-10 1/1:52.909:17:0:0:17:610:-10,-5.11751,0 1/1:25.8163:8:0:0:8:292:-10,-2.40824,0 0/0:51.2917:18:18:656:0:0:0,-5.41854,-10 1/1:46.8884:15:0:0:15:512:-10,-4.51545,0 1/1:10.7648:3:0:0:3:105:-9.8,-0.90309,0 0/1:99:21:13:491:8:266:-10,0,-10 0/0:12.1578:5:5:185:0:0:0,-1.50515,-10 1/1:70.9708:23:0:0:23:836:-10,-6.92369,0 0/0:48.2814:17:17:605:0:0:0,-5.11751,-10 0/1:96.6862:13:10:379:3:110:-8.80964,0,-10 0/0:30.2196:11:11:383:0:0:0,-3.31133,-10 0/0:69.3535:24:24:852:0:0:0,-7.22472,-10 0/0:15.1681:6:6:221:0:0:0,-1.80618,-10 0/0:27.2093:10:10:380:0:0:0,-3.0103,-10 1/1:19.7957:6:0:0:6:227:-10,-1.80618,0 1/1:25.8163:8:0:0:8:288:-10,-2.40824,0 1/1:25.8163:8:0:0:8:275:-10,-2.40824,0 1/1:70.9708:23:0:0:23:837:-10,-6.92369,0 0/1:99:17:11:371:6:180:-10,0,-10 0/1:99:14:6:226:8:295:-10,0,-10 1/1:40.8678:13:0:0:13:486:-10,-3.91339,0 0/0:45.2711:16:16:571:0:0:0,-4.81648,-10 0/0:21.1887:8:8:302:0:0:0,-2.40824,-10 0/0:54.302:19:19:684:0:0:0,-5.71957,-10 1/1:31.8369:10:0:0:10:373:-10,-3.0103,0 0/1:42.7874:3:1:38:2:72:-6.41403,0,-3.37403 1/1:52.909:17:0:0:17:611:-10,-5.11751,0 1/1:43.8781:14:0:0:14:521:-10,-4.21442,0 1/1:34.8472:11:0:0:11:409:-10,-3.31133,0 scaffold_6 7104476 . G A 5931.44 . AB=0.603896;ABP=17.4492;AC=26;AF=0.141304;AN=184;AO=218;CIGAR=1X;DP=1406;DPB=1406;DPRA=1.06507;EPP=6.99465;EPPR=5.00249;GTI=4;LEN=1;MEANALT=1.05;MQM=59.8394;MQMR=59.9587;NS=92;NUMALT=1;ODDS=0.207087;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8078;QR=43744;RO=1187;RPP=459.179;RPPR=2494.42;RUN=1;SAF=117;SAP=5.56029;SAR=101;SRF=569;SRP=7.40264;SRR=618;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:35.4369:10:10:343:0:0:0,-3.0103,-10 0/0:59.5193:18:18:660:0:0:0,-5.41854,-10 0/0:50.4884:15:15:560:0:0:0,-4.51545,-10 0/0:47.4781:14:14:523:0:0:0,-4.21442,-10 0/0:53.4987:16:16:585:0:0:0,-4.81648,-10 0/0:17.3751:4:4:152:0:0:0,-1.20412,-10 0/0:65.5399:20:20:722:0:0:0,-6.0206,-10 0/0:71.5605:22:22:821:0:0:0,-6.62266,-10 0/0:50.4884:15:15:566:0:0:0,-4.51545,-10 0/0:17.3751:4:4:152:0:0:0,-1.20412,-10 0/0:20.3854:5:5:190:0:0:0,-1.50515,-10 0/0:23.3957:6:6:218:0:0:0,-1.80618,-10 0/1:99:24:13:472:11:418:-10,0,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:89.6224:28:28:1014:0:0:0,-8.42884,-10 0/0:50.4884:15:15:541:0:0:0,-4.51545,-10 0/0:71.5605:22:22:812:0:0:0,-6.62266,-10 0/0:14.3648:3:3:112:0:0:0,-0.90309,-10 1/1:17.9644:13:0:0:13:490:-10,-3.91339,0 0/0:68.5502:21:21:787:0:0:0,-6.32163,-10 0/0:41.4575:12:12:450:0:0:0,-3.61236,-10 0/0:89.6224:28:28:1028:0:0:0,-8.42884,-10 0/0:17.3751:4:4:129:0:0:0,-1.20412,-10 0/1:99:11:6:210:5:165:-10,0,-10 1/1:26.9953:16:0:0:16:581:-10,-4.81648,0 0/0:59.5193:18:18:676:0:0:0,-5.41854,-10 1/1:26.9953:16:0:0:16:608:-10,-4.81648,0 0/1:0.046083:5:0:0:5:189:-10,-1.50515,0 0/0:62.5296:19:19:693:0:0:0,-5.71957,-10 0/1:99:34:14:525:20:757:-10,0,-10 1/1:5.92323:10:0:0:9:339:-10,-2.70927,0 0/1:0.187341:7:0:0:7:265:-10,-2.10721,0 0/0:50.4884:15:15:542:0:0:0,-4.51545,-10 0/0:23.3957:6:6:206:0:0:0,-1.80618,-10 1/1:26.9953:16:0:0:16:607:-10,-4.81648,0 0/0:26.406:7:7:265:0:0:0,-2.10721,-10 0/0:38.4472:11:11:411:0:0:0,-3.31133,-10 0/1:99:22:8:304:14:508:-10,0,-10 0/1:0.046083:5:0:0:5:190:-10,-1.50515,0 0/1:0.383128:8:0:0:8:280:-10,-2.40824,0 0/1:99:24:17:643:7:266:-10,0,-10 0/0:56.509:17:17:636:0:0:0,-5.11751,-10 0/0:68.5502:21:21:724:0:0:0,-6.32163,-10 0/0:80.5913:25:25:924:0:0:0,-7.52575,-10 0/0:65.5399:20:20:742:0:0:0,-6.0206,-10 0/0:41.4575:12:12:454:0:0:0,-3.61236,-10 0/0:99:33:33:1225:0:0:0,-9.93399,-10 0/0:59.5193:18:18:656:0:0:0,-5.41854,-10 0/0:65.5399:20:20:748:0:0:0,-6.0206,-10 1/1:63.1189:28:0:0:28:1043:-10,-8.42884,0 0/0:56.509:17:17:628:0:0:0,-5.11751,-10 0/0:89.6224:28:28:1053:0:0:0,-8.42884,-10 1/1:17.9644:13:0:0:13:467:-10,-3.91339,0 0/0:29.4163:8:8:300:0:0:0,-2.40824,-10 0/0:89.6224:28:28:1039:0:0:0,-8.42884,-10 0/0:41.4575:12:12:456:0:0:0,-3.61236,-10 0/1:99:14:3:114:11:418:-10,0,-8.98668 0/0:50.4884:15:15:539:0:0:0,-4.51545,-10 0/0:44.4678:13:13:487:0:0:0,-3.91339,-10 0/0:35.4369:10:10:379:0:0:0,-3.0103,-10 0/0:74.5708:23:23:870:0:0:0,-6.92369,-10 0/0:62.5296:19:19:663:0:0:0,-5.71957,-10 0/0:80.5913:25:25:930:0:0:0,-7.52575,-10 0/0:56.509:17:17:630:0:0:0,-5.11751,-10 0/0:29.4163:8:8:283:0:0:0,-2.40824,-10 0/0:59.5193:18:18:684:0:0:0,-5.41854,-10 0/0:50.4884:15:15:552:0:0:0,-4.51545,-10 0/0:14.3648:3:3:114:0:0:0,-0.90309,-10 0/0:68.5502:21:21:745:0:0:0,-6.32163,-10 0/0:20.3854:5:5:190:0:0:0,-1.50515,-10 0/0:74.5708:23:23:864:0:0:0,-6.92369,-10 0/0:56.509:17:17:591:0:0:0,-5.11751,-10 0/0:44.4678:13:13:494:0:0:0,-3.91339,-10 0/0:38.4472:11:11:406:0:0:0,-3.31133,-10 0/0:77.5811:24:24:831:0:0:0,-7.22472,-10 0/0:23.3957:6:6:228:0:0:0,-1.80618,-10 0/0:35.4369:10:10:378:0:0:0,-3.0103,-10 0/0:23.3957:6:6:228:0:0:0,-1.80618,-10 0/0:29.4163:8:8:294:0:0:0,-2.40824,-10 0/0:29.4163:8:8:282:0:0:0,-2.40824,-10 0/0:31.0985:25:24:846:1:38:0,-2.32781,-10 0/0:34.8909:18:17:645:1:16:0,-2.56327,-10 0/0:47.4781:14:14:510:0:0:0,-4.21442,-10 0/0:44.4678:13:13:472:0:0:0,-3.91339,-10 0/0:53.4987:16:16:581:0:0:0,-4.81648,-10 0/0:29.4163:8:8:303:0:0:0,-2.40824,-10 0/0:62.5296:19:19:715:0:0:0,-5.71957,-10 1/1:14.9541:12:0:0:12:433:-10,-3.61236,0 0/0:14.3648:3:3:113:0:0:0,-0.90309,-10 0/0:59.5193:18:18:668:0:0:0,-5.41854,-10 0/0:50.4884:15:15:564:0:0:0,-4.51545,-10 0/0:38.4472:11:11:418:0:0:0,-3.31133,-10 scaffold_6 7321268 . G A 633.149 . AB=0.560976;ABP=4.33437;AC=1;AF=0.00543478;AN=184;AO=26;CIGAR=1X;DP=2328;DPB=2328;DPRA=1.9439;EPP=6.01695;EPPR=3.04426;GTI=0;LEN=1;MEANALT=1;MQM=21.6154;MQMR=23.6177;NS=92;NUMALT=1;ODDS=4.6589;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=913;QR=83796;RO=2302;RPP=30.0702;RPPR=3259.43;RUN=1;SAF=12;SAP=3.34437;SAR=14;SRF=1142;SRP=3.31593;SRR=1160;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.5262:21:21:763:0:0:0,-6.32163,-10 0/0:44.4232:11:11:411:0:0:0,-3.31133,-10 0/0:92.5873:27:27:913:0:0:0,-8.12781,-10 0/0:53.4541:14:14:495:0:0:0,-4.21442,-10 0/0:50.4438:13:13:475:0:0:0,-3.91339,-10 0/0:53.4541:14:14:522:0:0:0,-4.21442,-10 0/1:99:41:18:614:23:846:-10,0,-10 0/0:99:36:36:1319:0:0:0,-10,-10 0/0:38.4026:9:9:307:0:0:0,-2.70927,-10 0/0:20.3408:3:3:113:0:0:0,-0.90309,-10 0/0:29.3717:6:6:228:0:0:0,-1.80618,-10 0/0:41.4129:10:10:378:0:0:0,-3.0103,-10 0/0:99:39:39:1413:0:0:0,-10,-10 0/0:99:43:43:1602:0:0:0,-10,-10 0/0:89.5774:26:26:927:0:0:0,-7.82678,-10 0/0:99:31:31:1133:0:0:0,-9.33193,-10 0/0:86.5672:25:25:913:0:0:0,-7.52575,-10 0/0:77.5365:22:22:829:0:0:0,-6.62266,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:99:51:50:1831:1:35:0,-10,-10 0/0:68.5056:19:19:614:0:0:0,-5.71957,-10 0/0:99:40:40:1507:0:0:0,-10,-10 0/0:56.4644:15:15:558:0:0:0,-4.51545,-10 0/0:83.557:24:24:887:0:0:0,-7.22472,-10 0/0:89.5774:26:26:945:0:0:0,-7.82678,-10 0/0:99:35:35:1297:0:0:0,-10,-10 0/0:77.5365:22:22:813:0:0:0,-6.62266,-10 0/0:59.4747:16:16:569:0:0:0,-4.81648,-10 0/0:59.4747:16:16:559:0:0:0,-4.81648,-10 0/0:99:38:38:1341:0:0:0,-10,-10 0/0:26.3614:5:5:185:0:0:0,-1.50515,-10 0/0:26.3614:5:5:177:0:0:0,-1.50515,-10 0/0:62.485:17:17:628:0:0:0,-5.11751,-10 0/0:65.4953:18:18:623:0:0:0,-5.41854,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:35.3923:8:8:299:0:0:0,-2.40824,-10 0/0:32.382:7:7:259:0:0:0,-2.10721,-10 0/0:99:41:41:1490:0:0:0,-10,-10 0/0:89.5774:26:26:929:0:0:0,-7.82678,-10 0/0:65.4953:18:18:671:0:0:0,-5.41854,-10 0/0:99:37:37:1375:0:0:0,-10,-10 0/0:74.5262:21:21:788:0:0:0,-6.32163,-10 0/0:99:30:30:1071:0:0:0,-9.0309,-10 0/0:99:38:38:1408:0:0:0,-10,-10 0/0:77.5365:22:22:779:0:0:0,-6.62266,-10 0/0:80.5468:23:23:861:0:0:0,-6.92369,-10 0/0:99:56:56:2066:0:0:0,-10,-10 0/0:98.6093:29:29:1089:0:0:0,-8.72987,-10 0/0:86.5672:25:25:922:0:0:0,-7.52575,-10 0/0:99:73:72:2570:1:16:0,-10,-10 0/0:44.4232:11:11:405:0:0:0,-3.31133,-10 0/0:99:38:38:1388:0:0:0,-10,-10 0/0:83.557:24:24:880:0:0:0,-7.22472,-10 0/0:41.4129:10:10:364:0:0:0,-3.0103,-10 0/0:99:67:67:2423:0:0:0,-10,-10 0/0:68.5056:19:19:697:0:0:0,-5.71957,-10 0/0:77.5365:22:22:768:0:0:0,-6.62266,-10 0/0:29.3717:6:6:225:0:0:0,-1.80618,-10 0/0:89.5774:26:26:973:0:0:0,-7.82678,-10 0/0:53.4541:14:14:467:0:0:0,-4.21442,-10 0/0:99:39:39:1441:0:0:0,-10,-10 0/0:77.5365:22:22:812:0:0:0,-6.62266,-10 0/0:99:52:52:1916:0:0:0,-10,-10 0/0:77.5365:22:22:830:0:0:0,-6.62266,-10 0/0:50.4438:13:13:482:0:0:0,-3.91339,-10 0/0:99:41:41:1516:0:0:0,-10,-10 0/0:68.5056:19:19:708:0:0:0,-5.71957,-10 0/0:47.4335:12:12:433:0:0:0,-3.61236,-10 0/0:99:40:40:1469:0:0:0,-10,-10 0/0:59.4747:16:16:587:0:0:0,-4.81648,-10 0/0:99:38:38:1343:0:0:0,-10,-10 0/0:99:45:45:1581:0:0:0,-10,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:65.4953:18:18:653:0:0:0,-5.41854,-10 0/0:99:46:46:1698:0:0:0,-10,-10 0/0:86.5672:25:25:867:0:0:0,-7.52575,-10 0/0:56.4644:15:15:539:0:0:0,-4.51545,-10 0/0:44.4232:11:11:414:0:0:0,-3.31133,-10 0/0:26.3614:5:5:166:0:0:0,-1.50515,-10 0/0:56.4644:15:15:521:0:0:0,-4.51545,-10 0/0:99:45:45:1612:0:0:0,-10,-10 0/0:99:35:35:1217:0:0:0,-10,-10 0/0:99:34:34:1256:0:0:0,-10,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:99:36:36:1354:0:0:0,-10,-10 0/0:26.3614:5:5:187:0:0:0,-1.50515,-10 0/0:92.5873:27:27:966:0:0:0,-8.12781,-10 0/0:92.5873:27:27:1005:0:0:0,-8.12781,-10 0/0:26.3614:5:5:184:0:0:0,-1.50515,-10 0/0:56.9764:24:23:840:1:16:0,-4.24451,-10 0/0:56.4644:15:15:559:0:0:0,-4.51545,-10 0/0:80.5468:23:23:868:0:0:0,-6.92369,-10 scaffold_6 7389877 . G A 607.693 . AB=0.541667;ABP=3.73412;AC=2;AF=0.010989;AN=182;AO=33;CIGAR=1X;DP=2301;DPB=2301;DPRA=1.31907;EPP=10.9724;EPPR=6.46317;GTI=1;LEN=1;MEANALT=1.11111;MQM=59.9697;MQMR=59.9947;NS=91;NUMALT=1;ODDS=8.45636;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1088;QR=80424;RO=2264;RPP=74.6689;RPPR=4569.55;RUN=1;SAF=11;SAP=10.9724;SAR=22;SRF=1097;SRP=7.71004;SRR=1167;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:25:25:906:0:0:0,-7.52575,-10 0/0:85.8053:18:18:638:0:0:0,-5.41854,-10 0/0:99:23:23:768:0:0:0,-6.92369,-10 0/0:54.7725:16:15:533:1:16:0,-2.01236,-10 0/0:70.7539:13:13:462:0:0:0,-3.91339,-10 .:.:.:.:.:.:.:. 0/0:99:45:45:1606:0:0:0,-10,-10 0/0:99:31:31:1115:0:0:0,-9.33193,-10 0/0:79.7848:16:16:557:0:0:0,-4.81648,-10 0/0:49.6818:6:6:227:0:0:0,-1.80618,-10 0/0:55.7024:8:8:260:0:0:0,-2.40824,-10 0/0:55.7024:8:8:274:0:0:0,-2.40824,-10 0/0:99:40:40:1379:0:0:0,-10,-10 0/0:99:28:28:992:0:0:0,-8.42884,-10 0/0:99:37:37:1294:0:0:0,-10,-10 0/0:99:37:37:1344:0:0:0,-10,-10 0/0:97.8388:22:22:786:0:0:0,-6.62266,-10 0/0:94.8354:21:21:777:0:0:0,-6.32163,-10 0/0:99:24:24:892:0:0:0,-7.22472,-10 0/0:99:46:46:1618:0:0:0,-10,-10 0/0:99:25:25:933:0:0:0,-7.52575,-10 0/0:99:37:37:1353:0:0:0,-10,-10 0/0:85.8053:18:18:623:0:0:0,-5.41854,-10 0/0:99:42:41:1476:1:38:0,-7.22001,-10 0/0:99:26:26:960:0:0:0,-7.82678,-10 0/0:99:41:40:1351:1:16:0,-9.12945,-10 0/0:97.8388:22:22:816:0:0:0,-6.62266,-10 0/0:55.7024:8:8:302:0:0:0,-2.40824,-10 0/0:99:36:35:1149:1:16:0,-7.68078,-10 0/0:99:42:42:1521:0:0:0,-10,-10 0/0:70.7539:13:13:455:0:0:0,-3.91339,-10 0/0:52.6921:7:7:243:0:0:0,-2.10721,-10 0/0:99:34:34:1147:0:0:0,-10,-10 0/0:79.7848:16:16:595:0:0:0,-4.81648,-10 0/0:99:26:26:915:0:0:0,-7.82678,-10 0/0:46.6715:5:5:185:0:0:0,-1.50515,-10 0/0:67.7436:12:12:381:0:0:0,-3.61236,-10 0/0:99:27:27:958:0:0:0,-8.12781,-10 0/0:99:25:25:862:0:0:0,-7.52575,-10 0/0:79.7848:16:16:576:0:0:0,-4.81648,-10 0/0:99:42:42:1439:0:0:0,-10,-10 0/0:99:27:27:945:0:0:0,-8.12781,-10 0/0:77.094:24:23:818:1:16:0,-4.24451,-10 0/0:99:41:41:1462:0:0:0,-10,-10 0/0:99:31:31:1095:0:0:0,-9.33193,-10 0/0:99:25:25:947:0:0:0,-7.52575,-10 0/0:99:45:45:1607:0:0:0,-10,-10 0/0:92.3475:37:36:1228:1:38:0,-5.76991,-10 0/0:82.795:17:17:601:0:0:0,-5.11751,-10 0/0:99:43:43:1463:0:0:0,-10,-10 0/0:82.795:17:17:635:0:0:0,-5.11751,-10 0/0:99:26:26:891:0:0:0,-7.82678,-10 0/0:97.8388:22:22:816:0:0:0,-6.62266,-10 0/0:46.6715:5:5:186:0:0:0,-1.50515,-10 0/0:99:53:53:1939:0:0:0,-10,-10 0/0:70.7539:13:13:468:0:0:0,-3.91339,-10 0/0:99:26:26:924:0:0:0,-7.82678,-10 0/0:67.7436:12:12:394:0:0:0,-3.61236,-10 0/0:94.8354:21:21:759:0:0:0,-6.32163,-10 0/0:64.7333:11:11:405:0:0:0,-3.31133,-10 0/0:99:59:59:2076:0:0:0,-10,-10 0/0:94.8354:21:21:783:0:0:0,-6.32163,-10 0/0:99:51:51:1839:0:0:0,-10,-10 0/0:94.8354:21:21:775:0:0:0,-6.32163,-10 0/0:79.7848:16:16:558:0:0:0,-4.81648,-10 0/0:99:47:46:1647:1:16:0,-10,-10 0/0:99:25:25:893:0:0:0,-7.52575,-10 0/0:70.7539:13:13:487:0:0:0,-3.91339,-10 0/0:99:48:48:1760:0:0:0,-10,-10 0/0:85.8053:18:18:630:0:0:0,-5.41854,-10 0/0:79.7848:16:16:579:0:0:0,-4.81648,-10 0/0:99:38:37:1351:0:0:0,-10,-10 0/0:99:29:29:1019:0:0:0,-8.72987,-10 0/1:0.000922904:15:0:0:15:520:-10,-4.51545,0 0/1:99:33:21:702:11:412:-10,0,-10 0/0:64.7333:11:11:395:0:0:0,-3.31133,-10 0/0:97.8388:22:22:813:0:0:0,-6.62266,-10 0/0:79.7848:16:16:587:0:0:0,-4.81648,-10 0/0:61.723:10:10:352:0:0:0,-3.0103,-10 0/0:70.7539:13:13:476:0:0:0,-3.91339,-10 0/0:99:40:40:1440:0:0:0,-10,-10 0/0:99:31:29:1000:0:0:0,-8.72987,-10 0/0:99:33:33:1142:0:0:0,-9.93399,-10 0/0:99:26:26:902:0:0:0,-7.82678,-10 0/0:99:39:39:1380:0:0:0,-10,-10 0/0:61.723:10:10:362:0:0:0,-3.0103,-10 0/0:79.7848:16:16:566:0:0:0,-4.81648,-10 0/0:94.8354:21:21:717:0:0:0,-6.32163,-10 0/0:76.7745:15:15:565:0:0:0,-4.51545,-10 0/0:99:23:23:831:0:0:0,-6.92369,-10 0/0:99:30:30:1033:0:0:0,-9.0309,-10 0/0:76.7745:15:15:513:0:0:0,-4.51545,-10 scaffold_6 7430797 . G T 16865.4 . AB=0.517084;ABP=4.12324;AC=45;AF=0.247253;AN=182;AO=598;CIGAR=1X;DP=2487;DPB=2487;DPRA=1.06361;EPP=3.93989;EPPR=19.2889;GTI=2;LEN=1;MEANALT=1;MQM=59.8495;MQMR=59.973;NS=91;NUMALT=1;ODDS=0.0151088;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=21892;QR=69264;RO=1889;RPP=1301.55;RPPR=4104.92;RUN=1;SAF=291;SAP=3.93989;SAR=307;SRF=1004;SRP=19.2889;SRR=885;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:99:21:3:114:18:629:-10,0,-7.44222 1/1:40.5179:20:0:0:20:720:-10,-6.0206,0 0/1:99:34:18:674:16:590:-10,0,-10 1/1:22.4561:14:0:0:14:513:-10,-4.21442,0 0/0:96.1708:30:30:1058:0:0:0,-9.0309,-10 .:.:.:.:.:.:.:. 0/0:75.0993:23:23:827:0:0:0,-6.92369,-10 0/1:99:48:22:811:26:960:-10,0,-10 0/0:66.0684:20:20:726:0:0:0,-6.0206,-10 0/0:14.8933:3:3:114:0:0:0,-0.90309,-10 0/0:38.9757:11:11:416:0:0:0,-3.31133,-10 1/1:13.4252:11:0:0:11:392:-10,-3.31133,0 0/0:99:47:47:1672:0:0:0,-10,-10 0/0:99:46:46:1706:0:0:0,-10,-10 0/1:99:38:19:716:19:674:-10,0,-10 0/0:84.1302:26:26:931:0:0:0,-7.82678,-10 0/0:99:46:46:1706:0:0:0,-10,-10 0/0:60.0478:18:18:653:0:0:0,-5.41854,-10 0/0:69.0787:21:21:763:0:0:0,-6.32163,-10 0/0:99:37:37:1347:0:0:0,-10,-10 0/0:81.1198:25:25:921:0:0:0,-7.52575,-10 0/0:99:36:36:1322:0:0:0,-10,-10 0/0:48.0066:14:14:532:0:0:0,-4.21442,-10 0/0:87.1405:27:27:993:0:0:0,-8.12781,-10 0/0:9.76685:17:16:604:1:38:0,-0.087061,-10 0/0:99:46:46:1662:0:0:0,-10,-10 0/0:75.0993:23:23:850:0:0:0,-6.92369,-10 0/0:96.1708:30:30:1119:0:0:0,-9.0309,-10 0/0:90.1507:28:28:1028:0:0:0,-8.42884,-10 0/0:99:44:44:1635:0:0:0,-10,-10 0/0:38.9757:11:11:391:0:0:0,-3.31133,-10 0/0:23.9242:6:6:221:0:0:0,-1.80618,-10 1/1:82.6621:34:0:0:34:1276:-10,-10,0 0/0:57.0375:17:17:622:0:0:0,-5.11751,-10 0/0:78.1096:24:24:896:0:0:0,-7.22472,-10 1/1:10.4149:10:0:0:10:357:-10,-3.0103,0 0/0:44.9963:13:13:480:0:0:0,-3.91339,-10 0/0:90.1507:28:28:980:0:0:0,-8.42884,-10 0/0:51.0169:15:15:561:0:0:0,-4.51545,-10 0/0:81.1198:25:25:910:0:0:0,-7.52575,-10 0/1:99:38:15:539:23:867:-10,0,-10 0/1:1.2153:26:1:38:25:934:-10,-2.61181,0 0/0:99:31:31:1051:0:0:0,-9.33193,-10 0/1:99:41:23:842:18:669:-10,0,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:69.0787:21:21:754:0:0:0,-6.32163,-10 0/0:99:63:63:2295:0:0:0,-10,-10 0/0:99:45:45:1652:0:0:0,-10,-10 0/0:75.0993:23:23:845:0:0:0,-6.92369,-10 0/0:99:45:45:1680:0:0:0,-10,-10 0/0:54.0272:16:16:600:0:0:0,-4.81648,-10 0/0:99:51:51:1871:0:0:0,-10,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:29.9448:8:8:294:0:0:0,-2.40824,-10 0/0:99:50:50:1843:0:0:0,-10,-10 0/0:60.0478:18:18:662:0:0:0,-5.41854,-10 0/0:66.0684:20:20:747:0:0:0,-6.0206,-10 1/1:49.5488:23:0:0:23:780:-10,-6.92369,0 1/1:64.6003:28:0:0:28:1057:-10,-8.42884,0 0/0:72.089:22:22:792:0:0:0,-6.62266,-10 0/1:99:50:33:1189:17:618:-10,0,-10 0/0:41.986:12:12:422:0:0:0,-3.61236,-10 0/0:99:56:55:2019:1:38:0,-10,-10 1/1:61.59:27:0:0:27:999:-10,-8.12781,0 0/0:35.9654:10:10:370:0:0:0,-3.0103,-10 0/1:99:48:25:901:23:812:-10,0,-10 0/1:99:34:21:758:13:481:-10,0,-10 0/0:51.0169:15:15:542:0:0:0,-4.51545,-10 0/0:99:47:47:1750:0:0:0,-10,-10 0/0:32.9551:9:9:340:0:0:0,-2.70927,-10 0/0:81.1198:25:25:937:0:0:0,-7.52575,-10 0/0:93.1608:29:29:1071:0:0:0,-8.72987,-10 0/0:99:31:31:1108:0:0:0,-9.33193,-10 0/0:63.0581:19:19:720:0:0:0,-5.71957,-10 0/0:99:51:51:1864:0:0:0,-10,-10 0/0:60.0478:18:18:661:0:0:0,-5.41854,-10 1/1:43.5282:21:0:0:21:783:-10,-6.32163,0 0/1:0.387847:8:0:0:8:302:-10,-2.40824,0 1/1:13.4252:11:0:0:11:403:-10,-3.31133,0 0/0:51.0169:15:15:561:0:0:0,-4.51545,-10 1/1:58.9721:43:1:38:42:1511:-10,-7.51082,0 1/1:70.6209:30:0:0:30:1133:-10,-9.0309,0 1/1:70.6209:30:0:0:30:1107:-10,-9.0309,0 0/0:99:32:32:1176:0:0:0,-9.63296,-10 0/0:99:31:31:1178:0:0:0,-9.33193,-10 1/1:10.4149:10:0:0:10:358:-10,-3.0103,0 0/0:93.1608:29:29:1082:0:0:0,-8.72987,-10 0/0:44.9963:13:13:489:0:0:0,-3.91339,-10 0/1:99:18:13:491:5:188:-10,0,-10 1/1:79.6518:33:0:0:33:1223:-10,-9.93399,0 0/1:99:35:19:695:16:559:-10,0,-10 1/1:55.5694:25:0:0:25:921:-10,-7.52575,0 scaffold_6 7650573 . T C 551.943 . AB=0.536585;ABP=3.48696;AC=2;AF=0.0108696;AN=184;AO=23;CIGAR=1X;DP=2088;DPB=2088;DPRA=0.968348;EPP=3.10471;EPPR=4.53096;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.4389;NS=92;NUMALT=1;ODDS=9.74072;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=843;QR=75511;RO=2062;RPP=52.9542;RPPR=3836.75;RUN=1;SAF=12;SAP=3.10471;SAR=11;SRF=1013;SRP=4.37511;SRR=1049;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:87.4578:18:18:657:0:0:0,-5.41854,-10 0/0:66.3862:11:11:402:0:0:0,-3.31133,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:63.3759:10:10:378:0:0:0,-3.0103,-10 0/0:69.3965:12:12:439:0:0:0,-3.61236,-10 0/0:57.3553:8:8:300:0:0:0,-2.40824,-10 0/0:99:49:49:1784:0:0:0,-10,-10 0/0:99:27:27:942:0:0:0,-8.12781,-10 0/0:84.4481:17:17:632:0:0:0,-5.11751,-10 0/0:42.3038:3:3:113:0:0:0,-0.90309,-10 0/0:78.4274:15:15:566:0:0:0,-4.51545,-10 0/0:57.3553:8:8:299:0:0:0,-2.40824,-10 0/0:99:34:34:1253:0:0:0,-10,-10 0/0:99:37:37:1395:0:0:0,-10,-10 0/0:99:26:26:947:0:0:0,-7.82678,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:99:34:34:1235:0:0:0,-10,-10 0/0:66.3862:11:11:418:0:0:0,-3.31133,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:99:47:47:1739:0:0:0,-10,-10 0/0:78.4274:15:15:566:0:0:0,-4.51545,-10 0/0:99:35:35:1158:0:0:0,-10,-10 0/0:54.345:7:7:251:0:0:0,-2.10721,-10 0/1:99:13:4:152:9:330:-10,0,-10 0/0:99:23:23:861:0:0:0,-6.92369,-10 0/0:99:24:24:859:0:0:0,-7.22472,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:90.4676:19:19:719:0:0:0,-5.71957,-10 0/0:99:23:22:777:0:0:0,-6.62266,-10 0/0:99:46:46:1694:0:0:0,-10,-10 0/0:57.3553:8:8:302:0:0:0,-2.40824,-10 0/0:75.4171:14:14:531:0:0:0,-4.21442,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:63.3759:10:10:366:0:0:0,-3.0103,-10 0/0:72.4068:13:13:464:0:0:0,-3.91339,-10 0/0:54.345:7:7:264:0:0:0,-2.10721,-10 0/0:72.4068:13:13:492:0:0:0,-3.91339,-10 0/0:99:27:27:971:0:0:0,-8.12781,-10 0/0:75.4171:14:14:497:0:0:0,-4.21442,-10 0/0:72.4068:13:13:492:0:0:0,-3.91339,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:99:22:22:798:0:0:0,-6.62266,-10 0/0:90.4676:19:19:683:0:0:0,-5.71957,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:99:25:25:907:0:0:0,-7.52575,-10 0/0:69.3965:12:12:433:0:0:0,-3.61236,-10 0/0:99:57:57:2054:0:0:0,-10,-10 0/0:99:38:38:1391:0:0:0,-10,-10 0/0:66.3862:11:11:395:0:0:0,-3.31133,-10 0/0:99:43:43:1545:0:0:0,-10,-10 0/0:99:23:23:846:0:0:0,-6.92369,-10 0/0:99:37:37:1306:0:0:0,-10,-10 0/0:66.3862:11:11:418:0:0:0,-3.31133,-10 0/0:75.4171:14:14:485:0:0:0,-4.21442,-10 0/0:99:41:40:1462:0:0:0,-10,-10 0/0:51.3347:6:6:227:0:0:0,-1.80618,-10 0/1:99:28:15:541:13:475:-10,0,-10 0/0:69.3965:12:12:428:0:0:0,-3.61236,-10 0/0:84.4481:17:17:565:0:0:0,-5.11751,-10 0/0:99:22:22:836:0:0:0,-6.62266,-10 0/0:99:45:45:1641:0:0:0,-10,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:99:53:52:1955:0:0:0,-10,-10 0/0:58.2342:25:24:871:1:38:0,-2.32781,-10 0/0:66.3862:11:11:383:0:0:0,-3.31133,-10 0/0:99:32:32:1201:0:0:0,-9.63296,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:72.4068:13:13:491:0:0:0,-3.91339,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:78.4274:15:15:569:0:0:0,-4.51545,-10 0/0:99:29:29:1059:0:0:0,-8.72987,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/0:99:30:30:1084:0:0:0,-9.0309,-10 0/0:87.4578:18:18:677:0:0:0,-5.41854,-10 0/0:99:34:34:1218:0:0:0,-10,-10 0/0:81.4376:16:16:599:0:0:0,-4.81648,-10 0/0:90.4676:19:19:677:0:0:0,-5.71957,-10 0/0:78.4274:15:15:567:0:0:0,-4.51545,-10 0/0:54.345:7:7:253:0:0:0,-2.10721,-10 0/0:84.4481:17:17:632:0:0:0,-5.11751,-10 0/0:99:39:39:1455:0:0:0,-10,-10 0/0:99:42:42:1504:0:0:0,-10,-10 0/0:99:22:22:829:0:0:0,-6.62266,-10 0/0:99:24:24:898:0:0:0,-7.22472,-10 0/0:96.4851:21:21:776:0:0:0,-6.32163,-10 0/0:48.3244:5:5:183:0:0:0,-1.50515,-10 0/0:84.4481:17:17:640:0:0:0,-5.11751,-10 0/0:84.4481:17:17:639:0:0:0,-5.11751,-10 0/0:66.3862:11:11:366:0:0:0,-3.31133,-10 0/0:72.4068:13:13:491:0:0:0,-3.91339,-10 0/0:99:24:24:886:0:0:0,-7.22472,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 scaffold_6 7650584 . C T 22925.3 . AB=0.475945;ABP=5.93544;AC=73;AF=0.396739;AN=184;AO=792;CIGAR=1X;DP=2086;DPB=2086;DPRA=1.12407;EPP=3.54768;EPPR=7.90366;GTI=2;LEN=1;MEANALT=1;MQM=59.5833;MQMR=59.3655;NS=92;NUMALT=1;ODDS=0.0206891;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=28777;QR=47494;RO=1294;RPP=1488.21;RPPR=2427.55;RUN=1;SAF=413;SAP=6.17977;SAR=379;SRF=610;SRP=12.1996;SRR=684;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.096:18:18:675:0:0:0,-5.41854,-10 0/0:38.0239:11:11:390:0:0:0,-3.31133,-10 0/0:98.2224:31:31:1162:0:0:0,-9.33193,-10 0/0:32.0033:9:9:329:0:0:0,-2.70927,-10 0/1:99:12:6:228:6:221:-10,0,-10 0/0:28.993:8:8:293:0:0:0,-2.40824,-10 0/0:99:49:49:1829:0:0:0,-10,-10 0/1:99:27:9:340:18:645:-10,0,-10 1/1:41.5757:17:0:0:17:614:-10,-5.11751,0 0/0:13.9415:3:3:111:0:0:0,-0.90309,-10 0/0:50.0651:15:15:560:0:0:0,-4.51545,-10 0/0:28.993:8:8:304:0:0:0,-2.40824,-10 0/1:99:34:20:740:14:532:-10,0,-10 0/1:99:37:21:774:16:571:-10,0,-10 0/1:99:26:13:486:13:460:-10,0,-10 0/0:92.2091:29:29:1054:0:0:0,-8.72987,-10 0/0:99:34:34:1206:0:0:0,-10,-10 0/0:38.0239:11:11:412:0:0:0,-3.31133,-10 0/1:99:26:14:531:12:442:-10,0,-10 1/1:99:47:0:0:47:1719:-10,-10,0 1/1:35.5551:15:0:0:15:562:-10,-4.51545,0 1/1:95.7568:35:0:0:35:1220:-10,-10,0 1/1:11.4727:7:0:0:7:266:-10,-2.10721,0 0/1:84.1388:13:9:322:4:104:-8.56092,0,-10 1/1:59.6375:23:0:0:23:819:-10,-6.92369,0 0/1:99:24:16:578:8:297:-10,0,-10 0/0:71.1372:22:22:812:0:0:0,-6.62266,-10 0/0:62.1063:19:19:713:0:0:0,-5.71957,-10 0/0:74.1475:23:23:839:0:0:0,-6.92369,-10 0/1:99:46:21:762:25:899:-10,0,-10 0/0:28.993:8:8:304:0:0:0,-2.40824,-10 0/0:47.0548:14:14:523:0:0:0,-4.21442,-10 1/1:71.6787:27:0:0:27:984:-10,-8.12781,0 1/1:20.5036:10:0:0:10:358:-10,-3.0103,0 1/1:29.5345:13:0:0:13:491:-10,-3.91339,0 1/1:11.4727:7:0:0:7:266:-10,-2.10721,0 1/1:26.5242:12:0:0:12:450:-10,-3.61236,0 1/1:71.6787:27:0:0:27:1005:-10,-8.12781,0 1/1:32.5448:14:0:0:14:507:-10,-4.21442,0 1/1:29.5345:13:0:0:13:494:-10,-3.91339,0 0/0:98.2224:31:31:1126:0:0:0,-9.33193,-10 0/1:1.20641:22:1:38:21:753:-10,-1.48024,0 1/1:47.5963:19:0:0:19:687:-10,-5.71957,0 0/1:99:31:15:539:16:598:-10,0,-10 0/0:80.168:25:25:897:0:0:0,-7.52575,-10 0/1:99:12:3:114:9:339:-10,0,-9.37006 0/1:99:57:26:911:31:1142:-10,0,-10 0/1:99:38:19:715:19:690:-10,0,-10 0/0:38.0239:11:11:383:0:0:0,-3.31133,-10 1/1:99:43:0:0:43:1567:-10,-10,0 1/1:59.6375:23:0:0:23:842:-10,-6.92369,0 1/1:99:37:0:0:37:1315:-10,-10,0 0/0:38.0239:11:11:412:0:0:0,-3.31133,-10 1/1:32.5448:14:0:0:14:512:-10,-4.21442,0 0/1:99:41:25:885:16:581:-10,0,-10 1/1:8.46241:6:0:0:6:228:-10,-1.80618,0 0/1:17.6365:28:26:968:2:76:-1.36865,0,-10 1/1:26.5242:12:0:0:12:441:-10,-3.61236,0 1/1:41.5757:17:0:0:17:594:-10,-5.11751,0 0/0:71.1372:22:22:831:0:0:0,-6.62266,-10 0/0:99:45:45:1613:0:0:0,-10,-10 1/1:65.6581:25:0:0:25:901:-10,-7.52575,0 0/0:99:53:52:1930:1:38:0,-10,-10 0/0:80.168:25:25:917:0:0:0,-7.52575,-10 0/0:38.0239:11:11:384:0:0:0,-3.31133,-10 0/1:99:32:19:698:13:481:-10,0,-10 0/0:83.1782:26:26:963:0:0:0,-7.82678,-10 0/0:44.0445:13:13:492:0:0:0,-3.91339,-10 0/1:99:36:22:778:14:487:-10,0,-10 0/0:50.0651:15:15:568:0:0:0,-4.51545,-10 0/0:92.2091:29:29:1081:0:0:0,-8.72987,-10 0/0:99:38:38:1425:0:0:0,-10,-10 0/0:95.2159:30:30:1115:0:0:0,-9.0309,-10 0/0:59.096:18:18:676:0:0:0,-5.41854,-10 0/0:99:34:34:1203:0:0:0,-10,-10 0/0:53.0754:16:16:597:0:0:0,-4.81648,-10 0/0:62.1063:19:19:681:0:0:0,-5.71957,-10 0/0:50.0651:15:15:528:0:0:0,-4.51545,-10 0/0:25.9827:7:7:257:0:0:0,-2.10721,-10 1/1:41.5757:17:0:0:17:619:-10,-5.11751,0 0/0:99:39:39:1418:0:0:0,-10,-10 0/0:99:42:42:1545:0:0:0,-10,-10 0/1:99:22:14:512:8:290:-10,0,-10 0/0:77.1578:24:24:882:0:0:0,-7.22472,-10 0/0:68.1269:21:21:773:0:0:0,-6.32163,-10 0/1:0.665018:5:0:0:5:190:-10,-1.50515,0 1/1:41.5757:17:0:0:17:628:-10,-5.11751,0 1/1:41.5757:17:0:0:17:590:-10,-5.11751,0 0/0:38.0239:11:11:384:0:0:0,-3.31133,-10 0/1:99:13:6:228:7:262:-10,0,-10 0/0:77.1578:24:24:882:0:0:0,-7.22472,-10 0/0:74.1475:23:23:868:0:0:0,-6.92369,-10 scaffold_6 7787250 . G T 95.9289 . AB=0.315789;ABP=8.61041;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1X;DP=1312;DPB=1312;DPRA=1.3372;EPP=3.0103;EPPR=5.16845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=10.2807;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=205;QR=47698;RO=1304;RPP=16.0391;RPPR=2834.61;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=634;SRP=5.16845;SRR=670;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.7523:12:12:455:0:0:0,-3.61236,-10 0/0:59.7008:7:7:254:0:0:0,-2.10721,-10 0/0:68.7317:10:10:375:0:0:0,-3.0103,-10 0/0:59.7008:7:7:266:0:0:0,-2.10721,-10 0/0:56.6905:6:6:217:0:0:0,-1.80618,-10 0/0:65.7214:9:9:333:0:0:0,-2.70927,-10 0/0:99:27:27:1009:0:0:0,-8.12781,-10 0/0:86.7934:16:16:600:0:0:0,-4.81648,-10 0/0:68.7317:10:10:352:0:0:0,-3.0103,-10 0/0:44.6493:2:2:76:0:0:0,-0.60206,-7.22 0/0:44.6493:2:2:76:0:0:0,-0.60206,-7.22 0/0:53.6802:5:5:162:0:0:0,-1.50515,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:99:27:27:1023:0:0:0,-8.12781,-10 0/0:99:22:22:833:0:0:0,-6.62266,-10 0/0:86.7934:16:16:575:0:0:0,-4.81648,-10 0/0:99:22:22:834:0:0:0,-6.62266,-10 0/0:59.7008:7:7:266:0:0:0,-2.10721,-10 0/0:92.8138:18:18:680:0:0:0,-5.41854,-10 0/0:99:31:31:1071:0:0:0,-9.33193,-10 0/0:80.7729:14:14:499:0:0:0,-4.21442,-10 0/0:99:24:24:883:0:0:0,-7.22472,-10 0/0:65.7214:9:9:301:0:0:0,-2.70927,-10 0/0:74.7523:13:12:429:0:0:0,-3.61236,-10 0/0:80.7729:14:14:496:0:0:0,-4.21442,-10 0/0:80.7729:14:14:505:0:0:0,-4.21442,-10 0/0:80.7729:14:14:521:0:0:0,-4.21442,-10 0/0:71.742:11:11:408:0:0:0,-3.31133,-10 0/0:83.7831:15:15:546:0:0:0,-4.51545,-10 0/0:86.7934:16:16:558:0:0:0,-4.81648,-10 0/0:50.6699:4:4:148:0:0:0,-1.20412,-10 0/0:65.7214:9:9:319:0:0:0,-2.70927,-10 0/0:89.8036:17:17:622:0:0:0,-5.11751,-10 0/0:68.7317:10:10:366:0:0:0,-3.0103,-10 0/0:92.8138:18:18:658:0:0:0,-5.41854,-10 0/0:65.7214:9:9:342:0:0:0,-2.70927,-10 0/0:74.7523:12:12:454:0:0:0,-3.61236,-10 0/0:86.7934:16:16:606:0:0:0,-4.81648,-10 0/0:65.7214:9:9:326:0:0:0,-2.70927,-10 0/0:62.7111:8:8:293:0:0:0,-2.40824,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:74.7523:12:12:411:0:0:0,-3.61236,-10 0/0:50.6699:4:4:152:0:0:0,-1.20412,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:65.7214:9:9:328:0:0:0,-2.70927,-10 0/0:68.7317:10:10:366:0:0:0,-3.0103,-10 0/0:99:31:31:1077:0:0:0,-9.33193,-10 0/0:89.8036:17:17:624:0:0:0,-5.11751,-10 0/0:80.7729:14:14:492:0:0:0,-4.21442,-10 0/0:99:29:29:1081:0:0:0,-8.72987,-10 0/0:74.7523:12:12:454:0:0:0,-3.61236,-10 0/0:83.7831:15:15:566:0:0:0,-4.51545,-10 0/0:65.7214:9:9:314:0:0:0,-2.70927,-10 0/0:50.6699:4:4:152:0:0:0,-1.20412,-10 0/0:99:37:37:1360:0:0:0,-10,-10 0/0:62.7111:8:8:302:0:0:0,-2.40824,-10 0/0:71.742:11:11:374:0:0:0,-3.31133,-10 0/0:68.7317:10:10:344:0:0:0,-3.0103,-10 0/0:80.7729:14:14:532:0:0:0,-4.21442,-10 0/0:62.7111:8:8:304:0:0:0,-2.40824,-10 0/0:99:27:27:1013:0:0:0,-8.12781,-10 0/0:86.7934:16:16:607:0:0:0,-4.81648,-10 0/0:99:28:28:1002:0:0:0,-8.42884,-10 0/0:83.7831:15:15:524:0:0:0,-4.51545,-10 0/0:53.6802:5:5:183:0:0:0,-1.50515,-10 0/1:95.9283:19:13:490:6:205:-10,0,-10 0/0:68.7317:10:10:380:0:0:0,-3.0103,-10 0/0:74.7523:12:12:444:0:0:0,-3.61236,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:71.742:11:11:418:0:0:0,-3.31133,-10 0/0:74.7523:12:12:455:0:0:0,-3.61236,-10 0/0:99:21:21:766:0:0:0,-6.32163,-10 0/0:92.8138:19:18:619:0:0:0,-5.41854,-10 0/0:71.742:11:11:396:0:0:0,-3.31133,-10 0/0:86.7934:16:16:580:0:0:0,-4.81648,-10 0/0:65.7214:9:9:340:0:0:0,-2.70927,-10 0/0:92.8138:18:18:671:0:0:0,-5.41854,-10 0/0:65.7214:9:9:334:0:0:0,-2.70927,-10 0/0:56.6905:6:6:206:0:0:0,-1.80618,-10 0/0:59.7008:7:7:254:0:0:0,-2.10721,-10 0/0:99:24:24:834:0:0:0,-7.22472,-10 0/0:92.8138:18:18:629:0:0:0,-5.41854,-10 0/0:80.7729:14:14:519:0:0:0,-4.21442,-10 0/0:95.8238:19:19:662:0:0:0,-5.71957,-10 0/0:86.7934:16:16:605:0:0:0,-4.81648,-10 0/0:53.6802:5:5:189:0:0:0,-1.50515,-10 0/0:83.7831:15:15:557:0:0:0,-4.51545,-10 0/0:83.7831:15:15:521:0:0:0,-4.51545,-10 0/0:50.6699:4:4:152:0:0:0,-1.20412,-10 0/0:99:22:22:822:0:0:0,-6.62266,-10 0/0:71.742:11:11:402:0:0:0,-3.31133,-10 0/0:74.7523:12:12:453:0:0:0,-3.61236,-10 scaffold_6 7824068 . C G 1999.31 . AB=0.484211;ABP=3.21602;AC=5;AF=0.0271739;AN=184;AO=72;CIGAR=1X;DP=2432;DPB=2432;DPRA=1.15188;EPP=4.09604;EPPR=4.71231;GTI=0;LEN=1;MEANALT=1;MQM=29.3889;MQMR=54.5545;NS=92;NUMALT=1;ODDS=5.26781;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2680;QR=85978;RO=2359;RPP=142.467;RPPR=4309.66;RUN=1;SAF=41;SAP=6.02623;SAR=31;SRF=1170;SRP=3.3426;SRR=1189;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:92.158:25:25:909:0:0:0,-7.52575,-10 0/0:40.9829:8:8:299:0:0:0,-2.40824,-10 0/0:80.1168:21:21:774:0:0:0,-6.32163,-10 0/0:77.1064:20:20:740:0:0:0,-6.0206,-10 0/0:59.0447:14:14:528:0:0:0,-4.21442,-10 0/0:50.0138:11:11:407:0:0:0,-3.31133,-10 0/0:99:54:54:1949:0:0:0,-10,-10 0/0:99:41:41:1479:0:0:0,-10,-10 0/0:53.0241:12:12:431:0:0:0,-3.61236,-10 0/0:37.9726:7:7:264:0:0:0,-2.10721,-10 0/0:31.952:5:5:189:0:0:0,-1.50515,-10 0/0:31.952:5:5:188:0:0:0,-1.50515,-10 0/0:99:38:38:1377:0:0:0,-10,-10 0/0:99:58:58:2097:0:0:0,-10,-10 0/0:99:38:38:1341:0:0:0,-10,-10 0/0:99:28:28:1046:0:0:0,-8.42884,-10 0/0:99:38:38:1361:0:0:0,-10,-10 0/0:65.0653:16:16:563:0:0:0,-4.81648,-10 0/0:89.1477:24:24:868:0:0:0,-7.22472,-10 0/0:99:59:59:2110:0:0:0,-10,-10 0/0:86.137:23:23:865:0:0:0,-6.92369,-10 0/0:99:50:50:1862:0:0:0,-10,-10 0/0:50.0138:11:11:404:0:0:0,-3.31133,-10 0/0:99:33:33:1174:0:0:0,-9.93399,-10 0/0:95.1683:26:26:948:0:0:0,-7.82678,-10 0/0:99:33:33:1216:0:0:0,-9.93399,-10 0/0:83.1271:22:22:822:0:0:0,-6.62266,-10 0/0:92.158:25:25:932:0:0:0,-7.52575,-10 0/0:99:34:34:1253:0:0:0,-10,-10 0/0:99:40:40:1481:0:0:0,-10,-10 0/0:28.9417:4:4:151:0:0:0,-1.20412,-10 0/0:22.9211:2:2:76:0:0:0,-0.60206,-7.22 0/0:71.0859:18:18:643:0:0:0,-5.41854,-10 0/0:68.0756:17:17:635:0:0:0,-5.11751,-10 0/0:77.1064:20:20:739:0:0:0,-6.0206,-10 0/0:62.055:15:15:545:0:0:0,-4.51545,-10 0/0:68.0756:17:17:616:0:0:0,-5.11751,-10 0/1:99:24:16:550:8:302:-10,0,-10 0/0:99:31:31:1160:0:0:0,-9.33193,-10 0/0:80.1168:21:21:756:0:0:0,-6.32163,-10 0/0:99:42:42:1497:0:0:0,-10,-10 0/0:68.0756:17:17:629:0:0:0,-5.11751,-10 0/0:99:28:28:1028:0:0:0,-8.42884,-10 0/0:99:55:55:1971:0:0:0,-10,-10 0/0:99:40:40:1463:0:0:0,-10,-10 0/0:83.1271:22:22:778:0:0:0,-6.62266,-10 0/0:99:66:66:2386:0:0:0,-10,-10 0/0:99:36:36:1351:0:0:0,-10,-10 0/0:74.0962:19:19:716:0:0:0,-5.71957,-10 0/0:99:54:54:1964:0:0:0,-10,-10 0/0:59.0447:14:14:530:0:0:0,-4.21442,-10 0/0:99:36:36:1280:0:0:0,-10,-10 0/0:68.0756:17:17:632:0:0:0,-5.11751,-10 0/0:40.9829:8:8:279:0:0:0,-2.40824,-10 0/0:99:36:36:1249:0:0:0,-10,-10 0/0:65.0653:16:16:598:0:0:0,-4.81648,-10 0/0:99:36:36:1276:0:0:0,-10,-10 0/0:65.0653:16:16:553:0:0:0,-4.81648,-10 0/0:99:28:28:1028:0:0:0,-8.42884,-10 0/0:59.0447:14:14:523:0:0:0,-4.21442,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/1:99:43:22:800:21:783:-10,0,-10 0/0:53.0241:12:12:426:0:0:0,-3.61236,-10 0/0:68.0756:17:17:585:0:0:0,-5.11751,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:92.158:26:25:912:0:0:0,-7.52575,-10 0/0:56.0344:13:13:483:0:0:0,-3.91339,-10 0/0:99:44:44:1545:0:0:0,-10,-10 0/0:74.0962:19:19:715:0:0:0,-5.71957,-10 0/0:99:28:28:1038:0:0:0,-8.42884,-10 0/0:99:42:42:1548:0:0:0,-10,-10 0/0:99:43:43:1589:0:0:0,-10,-10 0/0:83.1271:22:22:775:0:0:0,-6.62266,-10 0/0:99:32:32:1207:0:0:0,-9.63296,-10 0/0:62.055:15:15:532:0:0:0,-4.51545,-10 1/1:30.6798:26:0:0:26:962:-10,-7.82678,0 0/0:80.1168:21:21:766:0:0:0,-6.32163,-10 0/0:40.9829:8:8:280:0:0:0,-2.40824,-10 0/0:89.1477:24:24:869:0:0:0,-7.22472,-10 0/0:99:39:39:1404:0:0:0,-10,-10 0/0:99:48:48:1777:0:0:0,-10,-10 0/1:99:28:11:411:17:633:-10,0,-10 0/0:99:45:45:1592:0:0:0,-10,-10 0/0:99:33:33:1239:0:0:0,-9.93399,-10 0/0:31.952:5:5:184:0:0:0,-1.50515,-10 0/0:92.158:25:25:918:0:0:0,-7.52575,-10 0/0:53.0241:12:12:456:0:0:0,-3.61236,-10 0/0:34.9623:6:6:228:0:0:0,-1.80618,-10 0/0:86.137:23:23:865:0:0:0,-6.92369,-10 0/0:98.1787:27:27:1007:0:0:0,-8.12781,-10 0/0:83.1271:22:22:812:0:0:0,-6.62266,-10 scaffold_6 8078765 . T C 622.03 . AB=0.568182;ABP=4.78696;AC=3;AF=0.0163043;AN=184;AO=25;CIGAR=1X;DP=1224;DPB=1224;DPRA=1.10621;EPP=3.09716;EPPR=14.8927;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9733;NS=92;NUMALT=1;ODDS=5.65784;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=904;QR=44161;RO=1199;RPP=41.3151;RPPR=2419.02;RUN=1;SAF=14;SAP=3.79203;SAR=11;SRF=579;SRP=6.05471;SRR=620;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.7382:12:12:447:0:0:0,-3.61236,-10 0/0:39.6867:7:7:264:0:0:0,-2.10721,-10 0/0:63.7691:15:15:563:0:0:0,-4.51545,-10 0/0:33.6661:5:5:188:0:0:0,-1.50515,-10 0/0:27.6455:3:3:109:0:0:0,-0.90309,-10 0/0:36.6764:6:6:206:0:0:0,-1.80618,-10 0/0:81.8308:21:21:749:0:0:0,-6.32163,-10 0/0:54.7382:12:12:431:0:0:0,-3.61236,-10 0/0:51.7279:11:11:415:0:0:0,-3.31133,-10 0/0:24.6352:2:2:76:0:0:0,-0.60206,-7.22 0/0:30.6558:4:4:135:0:0:0,-1.20412,-10 0/0:36.6764:6:6:215:0:0:0,-1.80618,-10 0/0:78.8206:20:20:735:0:0:0,-6.0206,-10 0/0:99:30:30:1134:0:0:0,-9.0309,-10 0/0:87.8516:23:23:835:0:0:0,-6.92369,-10 0/0:69.7897:17:17:612:0:0:0,-5.11751,-10 0/0:63.7691:15:15:543:0:0:0,-4.51545,-10 0/0:42.697:8:8:304:0:0:0,-2.40824,-10 0/0:51.7279:11:11:418:0:0:0,-3.31133,-10 0/0:81.8308:21:21:771:0:0:0,-6.32163,-10 0/0:45.7073:9:9:336:0:0:0,-2.70927,-10 0/0:84.8411:22:22:835:0:0:0,-6.62266,-10 0/0:30.6558:4:4:147:0:0:0,-1.20412,-10 0/0:63.7691:15:15:549:0:0:0,-4.51545,-10 0/0:42.697:8:8:303:0:0:0,-2.40824,-10 0/0:78.8206:20:20:683:0:0:0,-6.0206,-10 0/0:30.6558:4:4:152:0:0:0,-1.20412,-10 0/0:54.7382:12:12:453:0:0:0,-3.61236,-10 0/0:57.7485:13:13:449:0:0:0,-3.91339,-10 0/0:69.7897:17:17:623:0:0:0,-5.11751,-10 0/0:27.6455:3:3:114:0:0:0,-0.90309,-10 0/0:39.6867:7:7:261:0:0:0,-2.10721,-10 0/0:63.7691:15:15:561:0:0:0,-4.51545,-10 0/0:42.697:8:8:304:0:0:0,-2.40824,-10 0/0:81.8308:21:21:758:0:0:0,-6.32163,-10 0/0:45.7073:9:9:341:0:0:0,-2.70927,-10 0/0:36.6764:6:6:228:0:0:0,-1.80618,-10 0/0:84.8411:22:22:806:0:0:0,-6.62266,-10 0/0:66.7794:16:16:595:0:0:0,-4.81648,-10 0/1:99:18:8:278:10:370:-10,0,-10 0/0:57.7485:13:13:489:0:0:0,-3.91339,-10 0/0:54.7382:12:12:423:0:0:0,-3.61236,-10 0/0:63.7691:15:15:566:0:0:0,-4.51545,-10 0/1:99:18:10:377:8:279:-10,0,-10 0/0:69.7897:17:17:616:0:0:0,-5.11751,-10 0/0:54.7382:12:12:453:0:0:0,-3.61236,-10 0/0:99:29:29:1059:0:0:0,-8.72987,-10 0/0:72.8:18:18:659:0:0:0,-5.41854,-10 0/0:45.7073:9:9:342:0:0:0,-2.70927,-10 0/0:84.8411:22:22:833:0:0:0,-6.62266,-10 0/0:54.7382:12:12:427:0:0:0,-3.61236,-10 0/0:96.8805:26:26:951:0:0:0,-7.82678,-10 0/0:45.7073:9:9:337:0:0:0,-2.70927,-10 0/0:33.6661:5:5:190:0:0:0,-1.50515,-10 0/0:99:33:33:1163:0:0:0,-9.93399,-10 0/0:45.7073:9:9:320:0:0:0,-2.70927,-10 0/0:57.7485:13:13:490:0:0:0,-3.91339,-10 0/1:83.3947:8:1:38:7:255:-10,0,-2.29485 0/0:39.6867:7:7:242:0:0:0,-2.10721,-10 0/0:69.7897:17:17:644:0:0:0,-5.11751,-10 0/0:69.7897:17:17:626:0:0:0,-5.11751,-10 0/0:57.7485:13:13:491:0:0:0,-3.91339,-10 0/0:90.8619:24:24:910:0:0:0,-7.22472,-10 0/0:57.7485:13:13:493:0:0:0,-3.91339,-10 0/0:48.7176:10:10:377:0:0:0,-3.0103,-10 0/0:66.7794:16:16:606:0:0:0,-4.81648,-10 0/0:63.7691:15:15:524:0:0:0,-4.51545,-10 0/0:39.6867:7:7:242:0:0:0,-2.10721,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:48.7176:10:10:358:0:0:0,-3.0103,-10 0/0:57.7485:13:13:490:0:0:0,-3.91339,-10 0/0:84.8411:22:22:821:0:0:0,-6.62266,-10 0/0:57.7485:13:13:494:0:0:0,-3.91339,-10 0/0:57.7485:13:13:478:0:0:0,-3.91339,-10 0/0:66.7794:16:16:608:0:0:0,-4.81648,-10 0/0:33.6661:5:5:190:0:0:0,-1.50515,-10 0/0:36.6764:6:6:228:0:0:0,-1.80618,-10 0/0:51.7279:11:11:412:0:0:0,-3.31133,-10 0/0:27.6455:3:3:114:0:0:0,-0.90309,-10 0/0:48.7176:10:10:376:0:0:0,-3.0103,-10 0/0:78.8206:20:20:760:0:0:0,-6.0206,-10 0/0:66.7794:16:16:565:0:0:0,-4.81648,-10 0/0:51.7279:11:11:418:0:0:0,-3.31133,-10 0/0:75.8103:19:19:706:0:0:0,-5.71957,-10 0/0:57.7485:13:13:494:0:0:0,-3.91339,-10 0/0:39.6867:7:7:244:0:0:0,-2.10721,-10 0/0:54.7382:12:12:404:0:0:0,-3.61236,-10 0/0:57.7485:13:13:476:0:0:0,-3.91339,-10 0/0:36.6764:6:6:220:0:0:0,-1.80618,-10 0/0:54.7382:12:12:434:0:0:0,-3.61236,-10 0/0:60.7588:14:14:532:0:0:0,-4.21442,-10 0/0:45.7073:9:9:329:0:0:0,-2.70927,-10 scaffold_6 8078776 . C T 724.583 . AB=0.604167;ABP=7.5342;AC=3;AF=0.0163043;AN=184;AO=29;CIGAR=1X;DP=1226;DPB=1226;DPRA=1.20883;EPP=4.88226;EPPR=3.01211;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9733;NS=92;NUMALT=1;ODDS=4.30214;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1080;QR=43951;RO=1197;RPP=57.5966;RPPR=2431.45;RUN=1;SAF=11;SAP=6.67934;SAR=18;SRF=579;SRP=5.76954;SRR=618;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.8795:12:12:437:0:0:0,-3.61236,-10 0/0:34.828:7:7:266:0:0:0,-2.10721,-10 0/0:58.9104:15:15:556:0:0:0,-4.51545,-10 0/0:28.8074:5:5:188:0:0:0,-1.50515,-10 0/0:22.7868:3:3:113:0:0:0,-0.90309,-10 0/0:31.8177:6:6:205:0:0:0,-1.80618,-10 0/0:76.9722:21:21:760:0:0:0,-6.32163,-10 0/0:49.8795:12:12:425:0:0:0,-3.61236,-10 0/0:46.8692:11:11:416:0:0:0,-3.31133,-10 0/0:19.7765:2:2:76:0:0:0,-0.60206,-7.22 0/0:25.7971:4:4:141:0:0:0,-1.20412,-10 0/0:31.8177:6:6:227:0:0:0,-1.80618,-10 0/0:73.9619:20:20:758:0:0:0,-6.0206,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:82.9927:23:23:850:0:0:0,-6.92369,-10 0/0:64.931:17:17:600:0:0:0,-5.11751,-10 0/0:58.9104:15:15:557:0:0:0,-4.51545,-10 0/0:37.8383:8:8:299:0:0:0,-2.40824,-10 0/0:46.8692:11:11:372:0:0:0,-3.31133,-10 0/0:76.9722:21:21:795:0:0:0,-6.32163,-10 0/0:40.8486:9:9:340:0:0:0,-2.70927,-10 0/0:79.9824:22:22:832:0:0:0,-6.62266,-10 0/0:25.7971:4:4:129:0:0:0,-1.20412,-10 0/0:58.9104:15:15:557:0:0:0,-4.51545,-10 0/0:37.8383:8:8:304:0:0:0,-2.40824,-10 0/0:73.9619:20:20:704:0:0:0,-6.0206,-10 0/0:28.8074:5:5:189:0:0:0,-1.50515,-10 0/0:49.8795:12:12:429:0:0:0,-3.61236,-10 0/0:52.8898:13:13:483:0:0:0,-3.91339,-10 0/0:64.931:17:17:637:0:0:0,-5.11751,-10 0/0:22.7868:3:3:114:0:0:0,-0.90309,-10 0/0:34.828:7:7:221:0:0:0,-2.10721,-10 0/0:58.9104:15:15:538:0:0:0,-4.51545,-10 0/0:37.8383:8:8:290:0:0:0,-2.40824,-10 0/0:79.9824:22:22:792:0:0:0,-6.62266,-10 0/0:40.8486:9:9:317:0:0:0,-2.70927,-10 0/0:31.8177:6:6:228:0:0:0,-1.80618,-10 0/0:76.9722:21:21:773:0:0:0,-6.32163,-10 0/0:61.9207:16:16:593:0:0:0,-4.81648,-10 0/0:67.9413:18:18:630:0:0:0,-5.41854,-10 0/0:52.8898:13:13:492:0:0:0,-3.91339,-10 0/0:49.8795:12:12:387:0:0:0,-3.61236,-10 0/0:58.9104:15:15:569:0:0:0,-4.51545,-10 0/0:67.9413:18:18:675:0:0:0,-5.41854,-10 0/0:64.931:17:17:632:0:0:0,-5.11751,-10 0/0:49.8795:12:12:454:0:0:0,-3.61236,-10 0/0:98.0452:28:28:1025:0:0:0,-8.42884,-10 0/0:67.9413:18:18:647:0:0:0,-5.41854,-10 0/0:40.8486:9:9:341:0:0:0,-2.70927,-10 0/0:79.9824:22:22:831:0:0:0,-6.62266,-10 0/0:46.8692:11:11:409:0:0:0,-3.31133,-10 0/0:92.0231:26:26:954:0:0:0,-7.82678,-10 0/0:40.8486:9:9:317:0:0:0,-2.70927,-10 0/0:28.8074:5:5:181:0:0:0,-1.50515,-10 0/0:99:33:33:1195:0:0:0,-9.93399,-10 0/0:40.8486:9:9:335:0:0:0,-2.70927,-10 0/0:52.8898:13:13:475:0:0:0,-3.91339,-10 0/0:37.8383:8:8:280:0:0:0,-2.40824,-10 0/0:34.828:7:7:255:0:0:0,-2.10721,-10 0/0:64.931:17:17:639:0:0:0,-5.11751,-10 0/0:64.931:17:17:606:0:0:0,-5.11751,-10 0/0:52.8898:13:13:489:0:0:0,-3.91339,-10 0/0:86.0029:24:24:905:0:0:0,-7.22472,-10 0/0:52.8898:13:13:494:0:0:0,-3.91339,-10 0/0:49.8795:12:12:452:0:0:0,-3.61236,-10 0/0:61.9207:16:16:601:0:0:0,-4.81648,-10 0/0:58.9104:15:15:518:0:0:0,-4.51545,-10 0/0:34.828:7:7:253:0:0:0,-2.10721,-10 0/0:99:33:33:1156:0:0:0,-9.93399,-10 0/0:43.8589:10:10:373:0:0:0,-3.0103,-10 0/1:0.0558643:13:0:0:13:484:-10,-3.91339,0 0/1:99:22:12:450:10:368:-10,0,-10 0/1:99:13:7:264:6:228:-10,0,-10 0/0:52.8898:13:13:472:0:0:0,-3.91339,-10 0/0:61.9207:16:16:607:0:0:0,-4.81648,-10 0/0:28.8074:5:5:183:0:0:0,-1.50515,-10 0/0:31.8177:6:6:227:0:0:0,-1.80618,-10 0/0:46.8692:11:11:412:0:0:0,-3.31133,-10 0/0:22.7868:3:3:114:0:0:0,-0.90309,-10 0/0:43.8589:10:10:376:0:0:0,-3.0103,-10 0/0:73.9619:20:20:757:0:0:0,-6.0206,-10 0/0:61.9207:16:16:568:0:0:0,-4.81648,-10 0/0:46.8692:11:11:418:0:0:0,-3.31133,-10 0/0:73.9619:20:20:737:0:0:0,-6.0206,-10 0/0:52.8898:13:13:490:0:0:0,-3.91339,-10 0/0:34.828:7:7:257:0:0:0,-2.10721,-10 0/0:49.8795:12:12:453:0:0:0,-3.61236,-10 0/0:52.8898:13:13:479:0:0:0,-3.91339,-10 0/0:31.8177:6:6:203:0:0:0,-1.80618,-10 0/0:49.8795:12:12:453:0:0:0,-3.61236,-10 0/0:55.9001:14:14:521:0:0:0,-4.21442,-10 0/0:40.8486:9:9:341:0:0:0,-2.70927,-10 scaffold_6 8168977 . G A 168.988 . AB=0.347826;ABP=7.63648;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1685;DPB=1685;DPRA=0.926711;EPP=5.18177;EPPR=3.19687;GTI=0;LEN=1;MEANALT=1;MQM=58.2222;MQMR=59.9439;NS=92;NUMALT=1;ODDS=11.626;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=312;QR=61450;RO=1676;RPP=22.5536;RPPR=3599.1;RUN=1;SAF=3;SAP=5.18177;SAR=6;SRF=827;SRP=3.63738;SRR=849;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:20:20:733:0:0:0,-6.0206,-10 0/0:56.5117:5:5:190:0:0:0,-1.50515,-10 0/0:83.6044:14:14:508:0:0:0,-4.21442,-10 0/0:77.5838:12:12:420:0:0:0,-3.61236,-10 0/0:89.6249:16:16:601:0:0:0,-4.81648,-10 0/0:50.583:11:10:379:1:16:0,-0.669937,-10 0/0:99:31:31:1120:0:0:0,-9.33193,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:74.5735:11:11:405:0:0:0,-3.31133,-10 0/0:53.5014:4:4:144:0:0:0,-1.20412,-10 0/0:59.522:6:6:225:0:0:0,-1.80618,-10 0/0:62.5323:7:7:264:0:0:0,-2.10721,-10 0/0:99:30:30:1122:0:0:0,-9.0309,-10 0/0:99:36:36:1274:0:0:0,-10,-10 0/0:99:25:25:891:0:0:0,-7.52575,-10 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:99:21:21:767:0:0:0,-6.32163,-10 0/0:71.5632:10:10:380:0:0:0,-3.0103,-10 0/0:99:24:24:885:0:0:0,-7.22472,-10 0/0:99:26:26:908:0:0:0,-7.82678,-10 0/0:98.6478:19:19:711:0:0:0,-5.71957,-10 0/0:98.6478:19:19:717:0:0:0,-5.71957,-10 0/0:62.5323:7:7:264:0:0:0,-2.10721,-10 0/1:99:23:15:565:8:296:-10,0,-10 0/0:99:23:23:871:0:0:0,-6.92369,-10 0/0:99:26:26:945:0:0:0,-7.82678,-10 0/0:86.6142:15:15:564:0:0:0,-4.51545,-10 0/0:80.594:13:13:477:0:0:0,-3.91339,-10 0/0:98.6478:19:19:708:0:0:0,-5.71957,-10 0/0:99:34:34:1239:0:0:0,-10,-10 0/0:53.5014:4:4:143:0:0:0,-1.20412,-10 0/0:50.4911:3:3:114:0:0:0,-0.90309,-10 0/0:92.6333:17:17:629:0:0:0,-5.11751,-10 0/0:68.5529:9:9:338:0:0:0,-2.70927,-10 0/0:99:24:24:885:0:0:0,-7.22472,-10 0/0:62.5323:7:7:252:0:0:0,-2.10721,-10 0/0:77.5838:12:12:453:0:0:0,-3.61236,-10 0/0:99:35:35:1262:0:0:0,-10,-10 0/0:95.6452:18:18:650:0:0:0,-5.41854,-10 0/0:56.5117:5:5:190:0:0:0,-1.50515,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:99:22:22:810:0:0:0,-6.62266,-10 0/0:99:22:22:776:0:0:0,-6.62266,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:99:23:23:856:0:0:0,-6.92369,-10 0/0:65.5426:8:8:297:0:0:0,-2.40824,-10 0/0:99:44:44:1627:0:0:0,-10,-10 0/0:99:27:27:978:0:0:0,-8.12781,-10 0/0:77.5838:12:12:446:0:0:0,-3.61236,-10 0/0:99:33:33:1151:0:0:0,-9.93399,-10 0/0:59.522:6:6:226:0:0:0,-1.80618,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:65.5426:8:8:298:0:0:0,-2.40824,-10 0/0:68.5529:9:9:331:0:0:0,-2.70927,-10 0/0:99:43:43:1560:0:0:0,-10,-10 0/0:98.6478:19:19:709:0:0:0,-5.71957,-10 0/0:99:22:22:806:0:0:0,-6.62266,-10 0/0:62.5323:7:7:264:0:0:0,-2.10721,-10 0/0:86.6142:15:15:561:0:0:0,-4.51545,-10 0/0:80.594:13:13:478:0:0:0,-3.91339,-10 0/0:98.6478:19:19:721:0:0:0,-5.71957,-10 0/0:99:22:22:821:0:0:0,-6.62266,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:65.5426:8:8:292:0:0:0,-2.40824,-10 0/0:92.6333:17:17:646:0:0:0,-5.11751,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:99:25:25:902:0:0:0,-7.52575,-10 0/0:68.5529:9:9:334:0:0:0,-2.70927,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:80.594:13:13:462:0:0:0,-3.91339,-10 0/0:92.6333:17:17:582:0:0:0,-5.11751,-10 0/0:99:32:32:1134:0:0:0,-9.63296,-10 0/0:99:22:22:831:0:0:0,-6.62266,-10 0/0:98.6478:19:19:719:0:0:0,-5.71957,-10 0/0:99:32:32:1167:0:0:0,-9.63296,-10 0/0:68.5529:9:9:292:0:0:0,-2.70927,-10 0/0:65.5426:8:8:279:0:0:0,-2.40824,-10 0/0:71.5632:10:10:369:0:0:0,-3.0103,-10 0/0:53.5014:4:4:152:0:0:0,-1.20412,-10 0/0:71.5632:10:10:378:0:0:0,-3.0103,-10 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:99:20:20:745:0:0:0,-6.0206,-10 0/0:98.6478:19:19:664:0:0:0,-5.71957,-10 0/0:99:31:31:1136:0:0:0,-9.33193,-10 0/0:50.4911:3:3:107:0:0:0,-0.90309,-9.98667 0/0:92.6333:17:17:644:0:0:0,-5.11751,-10 0/0:77.5838:12:12:441:0:0:0,-3.61236,-10 0/0:74.5735:11:11:396:0:0:0,-3.31133,-10 0/0:95.6452:18:18:679:0:0:0,-5.41854,-10 0/0:74.5735:11:11:414:0:0:0,-3.31133,-10 0/0:77.5838:12:12:452:0:0:0,-3.61236,-10 scaffold_6 8215744 . T A 63313.4 . AB=0.410811;ABP=15.7926;AC=170;AF=0.923913;AN=184;AO=2170;CIGAR=1X;DP=2360;DPB=2360;DPRA=1.38485;EPP=3.0143;EPPR=4.17776;GTI=1;LEN=1;MEANALT=1.04545;MQM=59.7576;MQMR=59.8978;NS=92;NUMALT=1;ODDS=2.90594;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=77827;QR=6809;RO=186;RPP=4689.08;RPPR=398.265;RUN=1;SAF=1087;SAP=3.02631;SAR=1083;SRF=99;SRP=4.69144;SRR=87;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:56.641:16:0:0:16:560:-10,-4.81648,0 0/0:13.2523:16:16:582:0:0:0,-4.81648,-10 0/1:99:27:16:608:11:402:-10,0,-10 1/1:80.7234:24:0:0:24:831:-10,-7.22472,0 1/1:59.6513:17:0:0:17:624:-10,-5.11751,0 1/1:29.5483:7:0:0:7:238:-10,-2.10721,0 1/1:99:52:0:0:52:1829:-10,-10,0 1/1:92.7636:28:0:0:28:999:-10,-8.42884,0 1/1:56.641:16:0:0:16:578:-10,-4.81648,0 1/1:17.5071:3:0:0:3:111:-10,-0.90309,0 1/1:32.5586:8:0:0:8:276:-10,-2.40824,0 1/1:38.5792:10:0:0:10:350:-10,-3.0103,0 1/1:99:37:0:0:37:1338:-10,-10,0 1/1:99:36:0:0:36:1291:-10,-10,0 1/1:99:35:0:0:35:1300:-10,-10,0 1/1:89.7538:27:0:0:27:949:-10,-8.12781,0 1/1:99:35:0:0:35:1244:-10,-10,0 1/1:29.5483:7:0:0:7:233:-10,-2.10721,0 1/1:83.7336:25:0:0:25:890:-10,-7.52575,0 1/1:99:46:0:0:46:1683:-10,-10,0 1/1:89.7538:27:0:0:27:964:-10,-8.12781,0 1/1:99:39:0:0:39:1342:-10,-10,0 1/1:35.5689:9:0:0:9:340:-10,-2.70927,0 1/1:86.7438:27:0:0:26:961:-10,-7.82678,0 1/1:83.7336:25:0:0:25:896:-10,-7.52575,0 1/1:71.6925:21:0:0:21:751:-10,-6.32163,0 1/1:71.6925:21:0:0:21:772:-10,-6.32163,0 1/1:50.6204:14:0:0:14:475:-10,-4.21442,0 1/1:62.6616:18:0:0:18:656:-10,-5.41854,0 1/1:99:52:0:0:52:1913:-10,-10,0 1/1:29.5483:7:0:0:7:266:-10,-2.10721,0 1/1:47.6101:13:0:0:13:449:-10,-3.91339,0 1/1:41.5895:11:0:0:11:408:-10,-3.31133,0 1/1:47.6101:13:0:0:13:493:-10,-3.91339,0 1/1:89.7538:27:0:0:27:977:-10,-8.12781,0 1/1:32.5586:8:0:0:8:292:-10,-2.40824,0 1/1:41.5895:11:0:0:11:389:-10,-3.31133,0 1/1:99:32:0:0:32:1140:-10,-9.63296,0 1/1:65.6719:19:0:0:19:694:-10,-5.71957,0 1/1:80.7234:24:0:0:24:856:-10,-7.22472,0 1/1:99:39:0:0:39:1422:-10,-10,0 1/1:99:31:0:0:31:1102:-10,-9.33193,0 1/1:58.4873:33:1:38:31:1152:-10,-4.67281,0 1/1:99:46:0:0:46:1690:-10,-10,0 1/1:99:35:0:0:35:1192:-10,-10,0 1/1:62.6616:18:0:0:18:615:-10,-5.41854,0 1/1:99:70:0:0:70:2515:-10,-10,0 1/1:99:37:0:0:37:1294:-10,-10,0 1/1:68.6822:20:0:0:20:758:-10,-6.0206,0 1/1:99:57:0:0:57:2078:-10,-10,0 1/1:59.6513:17:0:0:17:570:-10,-5.11751,0 1/1:99:51:0:0:51:1822:-10,-10,0 1/1:62.6616:19:0:0:18:625:-10,-5.41854,0 1/1:47.6101:13:0:0:13:460:-10,-3.91339,0 1/1:99:51:0:0:51:1788:-10,-10,0 1/1:80.7234:24:0:0:24:874:-10,-7.22472,0 1/1:98.7813:30:0:0:30:1093:-10,-9.0309,0 1/1:38.5792:10:0:0:10:331:-10,-3.0103,0 1/1:99:34:0:0:34:1226:-10,-10,0 1/1:32.5586:8:0:0:8:304:-10,-2.40824,0 1/1:99:42:0:0:42:1474:-10,-10,0 1/1:99:31:0:0:31:1082:-10,-9.33193,0 0/1:99:57:29:1041:28:1037:-10,0,-10 1/1:50.6204:14:0:0:14:494:-10,-4.21442,0 1/1:59.6513:17:0:0:17:630:-10,-5.11751,0 1/1:89.7538:27:0:0:27:973:-10,-8.12781,0 1/1:83.7336:25:0:0:25:915:-10,-7.52575,0 1/1:41.5895:11:0:0:11:389:-10,-3.31133,0 1/1:99:51:0:0:51:1801:-10,-10,0 1/1:47.6101:13:0:0:13:446:-10,-3.91339,0 1/1:71.6925:21:0:0:21:783:-10,-6.32163,0 1/1:89.7538:28:0:0:27:982:-10,-8.12781,0 1/1:99:34:0:0:34:1245:-10,-10,0 1/1:65.6719:19:0:0:19:678:-10,-5.71957,0 1/1:99:44:0:0:44:1622:-10,-10,0 1/1:98.7813:30:0:0:30:1047:-10,-9.0309,0 1/1:65.6719:19:0:0:19:702:-10,-5.71957,0 0/1:0.0465527:24:23:821:1:37:0,-2.14451,-10 0/0:13.2523:16:16:599:0:0:0,-4.81648,-10 1/1:50.6204:14:0:0:14:471:-10,-4.21442,0 0/1:99:48:27:1009:21:742:-10,0,-10 1/1:99:46:0:0:46:1669:-10,-10,0 1/1:83.7336:25:0:0:25:862:-10,-7.52575,0 0/1:99:21:10:358:11:412:-10,0,-10 1/1:99:37:0:0:37:1365:-10,-10,0 1/1:41.5895:11:0:0:11:404:-10,-3.31133,0 1/1:41.5895:11:0:0:11:394:-10,-3.31133,0 1/1:53.6307:15:0:0:15:516:-10,-4.51545,0 0/1:98.1126:8:4:129:4:151:-10,0,-10 0/0:22.2832:19:19:716:0:0:0,-5.71957,-10 1/1:35.0373:25:1:38:24:833:-10,-2.32781,0 0/0:37.3347:24:24:870:0:0:0,-7.22472,-10 scaffold_6 8215758 . C T 139.117 . AB=0.285714;ABP=14.1779;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=2358;DPB=2358;DPRA=1.3781;EPP=3.20771;EPPR=3.3102;GTI=0;LEN=1;MEANALT=1.25;MQM=58;MQMR=59.7766;NS=92;NUMALT=1;ODDS=15.2972;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=348;QR=85008;RO=2346;RPP=26.8965;RPPR=5097.28;RUN=1;SAF=6;SAP=3.20771;SAR=5;SRF=1182;SRP=3.3102;SRR=1164;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:16:16:594:0:0:0,-4.81648,-10 0/0:99:16:16:578:0:0:0,-4.81648,-10 0/0:99:27:27:1013:0:0:0,-8.12781,-10 0/0:99:24:24:859:0:0:0,-7.22472,-10 0/0:99:17:17:610:0:0:0,-5.11751,-10 0/0:78.4761:7:7:262:0:0:0,-2.10721,-10 0/0:99:52:52:1909:0:0:0,-10,-10 0/0:99:28:28:1003:0:0:0,-8.42884,-10 0/0:99:16:16:606:0:0:0,-4.81648,-10 0/0:66.4349:3:3:111:0:0:0,-0.90309,-10 0/0:81.4863:8:8:298:0:0:0,-2.40824,-10 0/0:87.5064:10:10:342:0:0:0,-3.0103,-10 0/0:99:37:37:1330:0:0:0,-10,-10 0/0:99:36:36:1290:0:0:0,-10,-10 0/0:99:35:35:1262:0:0:0,-10,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:99:35:34:1247:1:16:0,-7.39198,-10 0/0:78.4761:7:7:231:0:0:0,-2.10721,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:99:46:46:1619:0:0:0,-10,-10 0/0:99:27:27:975:0:0:0,-8.12781,-10 0/0:99:39:39:1418:0:0:0,-10,-10 0/0:84.4967:9:9:335:0:0:0,-2.70927,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:78.1298:25:24:850:1:38:0,-2.32781,-10 0/0:99:21:21:789:0:0:0,-6.32163,-10 0/0:99:21:21:755:0:0:0,-6.32163,-10 0/0:99:14:14:468:0:0:0,-4.21442,-10 0/0:99:18:18:669:0:0:0,-5.41854,-10 0/0:99:52:52:1890:0:0:0,-10,-10 0/0:78.4761:7:7:266:0:0:0,-2.10721,-10 0/0:96.5332:13:13:443:0:0:0,-3.91339,-10 0/0:90.5161:11:11:394:0:0:0,-3.31133,-10 0/0:96.5332:13:13:494:0:0:0,-3.91339,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/0:81.4863:8:8:300:0:0:0,-2.40824,-10 0/0:90.5161:11:11:379:0:0:0,-3.31133,-10 0/0:99:32:32:1172:0:0:0,-9.63296,-10 0/0:99:19:19:708:0:0:0,-5.71957,-10 0/0:99:24:24:850:0:0:0,-7.22472,-10 0/0:99:39:39:1425:0:0:0,-10,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:99:46:46:1691:0:0:0,-10,-10 0/0:99:35:35:1303:0:0:0,-10,-10 0/0:99:18:18:632:0:0:0,-5.41854,-10 0/0:99:70:70:2550:0:0:0,-10,-10 0/0:99:37:37:1311:0:0:0,-10,-10 0/0:99:20:20:739:0:0:0,-6.0206,-10 0/0:99:57:57:2049:0:0:0,-10,-10 0/0:99:17:17:613:0:0:0,-5.11751,-10 0/0:99:51:50:1761:1:16:0,-10,-10 0/0:99:19:19:672:0:0:0,-5.71957,-10 0/0:96.5332:13:13:481:0:0:0,-3.91339,-10 0/0:99:51:51:1809:0:0:0,-10,-10 0/0:99:24:24:831:0:0:0,-7.22472,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:87.5064:10:10:370:0:0:0,-3.0103,-10 0/0:99:34:34:1283:0:0:0,-10,-10 0/0:81.4863:8:8:297:0:0:0,-2.40824,-10 0/0:99:42:42:1505:0:0:0,-10,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/0:99:56:56:2041:0:0:0,-10,-10 0/0:99:14:14:528:0:0:0,-4.21442,-10 0/0:99:17:17:630:0:0:0,-5.11751,-10 0/0:99:27:27:954:0:0:0,-8.12781,-10 0/0:99:25:25:923:0:0:0,-7.52575,-10 0/0:90.5161:11:11:394:0:0:0,-3.31133,-10 0/0:99:51:51:1827:0:0:0,-10,-10 0/0:96.5332:13:13:441:0:0:0,-3.91339,-10 0/0:99:21:21:790:0:0:0,-6.32163,-10 0/1:99:28:19:722:8:278:-10,0,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:99:19:19:676:0:0:0,-5.71957,-10 0/0:99:43:43:1549:0:0:0,-10,-10 0/0:99:30:30:1048:0:0:0,-9.0309,-10 0/0:99:19:19:703:0:0:0,-5.71957,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:99:16:16:596:0:0:0,-4.81648,-10 0/0:99:14:14:477:0:0:0,-4.21442,-10 0/0:99:48:48:1790:0:0:0,-10,-10 0/0:99:46:46:1676:0:0:0,-10,-10 0/0:99:25:25:877:0:0:0,-7.52575,-10 0/0:99:21:21:740:0:0:0,-6.32163,-10 0/0:99:37:37:1316:0:0:0,-10,-10 0/0:90.5161:11:11:417:0:0:0,-3.31133,-10 0/0:90.5161:11:11:413:0:0:0,-3.31133,-10 0/0:99:15:15:493:0:0:0,-4.51545,-10 0/0:81.4863:8:8:293:0:0:0,-2.40824,-10 0/0:99:19:19:691:0:0:0,-5.71957,-10 0/0:99:25:25:894:0:0:0,-7.52575,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 scaffold_6 8245701 . A G 3373.73 . AB=0.589041;ABP=13.0645;AC=19;AF=0.103261;AN=184;AO=131;CIGAR=1X;DP=1145;DPB=1145;DPRA=0.999207;EPP=3.82253;EPPR=7.36831;GTI=3;LEN=1;MEANALT=1.0625;MQM=60;MQMR=59.9752;NS=92;NUMALT=1;ODDS=0.734294;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4783;QR=35762;RO=1009;RPP=287.473;RPPR=2194.03;RUN=1;SAF=62;SAP=3.82253;SAR=69;SRF=527;SRP=7.36831;SRR=482;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.9902:10:10:359:0:0:0,-3.0103,-10 0/0:29.949:6:6:225:0:0:0,-1.80618,-10 0/0:75.1035:21:21:753:0:0:0,-6.32163,-10 0/0:32.9593:7:7:250:0:0:0,-2.10721,-10 0/1:82.4349:11:8:299:3:114:-9.54615,0,-10 0/0:41.9902:10:10:369:0:0:0,-3.0103,-10 0/0:81.1241:23:23:809:0:0:0,-6.92369,-10 0/0:66.0726:18:18:679:0:0:0,-5.41854,-10 0/0:38.9799:9:9:317:0:0:0,-2.70927,-10 0/0:23.9284:4:4:150:0:0:0,-1.20412,-10 0/0:23.9284:4:4:152:0:0:0,-1.20412,-10 0/0:23.9284:4:4:145:0:0:0,-1.20412,-10 0/1:99:23:10:324:13:461:-10,0,-10 0/0:51.0211:13:13:457:0:0:0,-3.91339,-10 0/1:99:13:5:126:8:297:-10,0,-10 0/0:54.0314:14:14:487:0:0:0,-4.21442,-10 0/0:93.1651:28:27:947:0:0:0,-8.12781,-10 0/1:0.0455763:4:0:0:4:149:-10,-1.20412,0 0/1:99:14:7:264:7:266:-10,0,-10 0/1:99:15:5:134:10:356:-10,0,-10 0/0:45.0005:11:11:317:0:0:0,-3.31133,-10 0/1:99:21:9:298:12:455:-10,0,-10 0/0:23.9284:4:4:152:0:0:0,-1.20412,-10 0/0:51.0211:13:13:459:0:0:0,-3.91339,-10 0/0:35.9696:8:8:296:0:0:0,-2.40824,-10 0/0:54.0314:14:14:518:0:0:0,-4.21442,-10 1/1:30.2362:16:0:0:16:601:-10,-4.81648,0 0/1:0.185247:6:0:0:6:227:-10,-1.80618,0 0/0:63.0623:17:17:607:0:0:0,-5.11751,-10 0/0:90.1549:26:26:871:0:0:0,-7.82678,-10 1/1:9.16412:9:0:0:9:324:-10,-2.70927,0 0/1:0.793714:8:0:0:8:302:-10,-2.40824,0 0/0:38.9799:9:9:328:0:0:0,-2.70927,-10 1/1:9.16412:9:0:0:9:338:-10,-2.70927,0 0/0:35.9696:8:8:296:0:0:0,-2.40824,-10 0/0:26.9387:5:5:186:0:0:0,-1.50515,-10 0/0:60.052:17:16:598:0:0:0,-4.81648,-10 0/1:97.3048:11:3:91:8:281:-10,0,-7.39949 0/0:45.0005:11:11:416:0:0:0,-3.31133,-10 0/0:38.9799:9:9:308:0:0:0,-2.70927,-10 0/1:99:20:13:490:7:253:-10,0,-10 0/0:54.0314:14:14:520:0:0:0,-4.21442,-10 0/0:35.9696:8:8:304:0:0:0,-2.40824,-10 0/0:54.0314:14:14:516:0:0:0,-4.21442,-10 0/0:32.9593:7:7:218:0:0:0,-2.10721,-10 0/0:51.0211:13:13:471:0:0:0,-3.91339,-10 0/0:99:29:29:1029:0:0:0,-8.72987,-10 0/0:57.0417:15:15:524:0:0:0,-4.51545,-10 0/0:26.9387:6:5:180:0:0:0,-1.50515,-10 0/0:93.1651:27:27:971:0:0:0,-8.12781,-10 0/0:41.9902:10:10:361:0:0:0,-3.0103,-10 0/0:81.1241:24:23:805:0:0:0,-6.92369,-10 1/1:12.1744:10:0:0:10:344:-10,-3.0103,0 0/0:20.9181:3:3:113:0:0:0,-0.90309,-10 0/0:93.1651:27:27:978:0:0:0,-8.12781,-10 0/0:29.949:6:6:228:0:0:0,-1.80618,-10 0/0:60.052:16:16:565:0:0:0,-4.81648,-10 0/0:51.0211:13:13:488:0:0:0,-3.91339,-10 0/0:41.9902:10:10:380:0:0:0,-3.0103,-10 0/0:17.9078:2:2:67:0:0:0,-0.60206,-6.365 0/0:99:39:39:1410:0:0:0,-10,-10 0/0:32.9593:7:7:243:0:0:0,-2.10721,-10 0/0:72.0932:20:20:729:0:0:0,-6.0206,-10 0/0:38.9799:9:9:311:0:0:0,-2.70927,-10 0/0:38.9799:9:9:336:0:0:0,-2.70927,-10 0/0:78.1138:22:22:791:0:0:0,-6.62266,-10 0/0:45.0005:11:11:394:0:0:0,-3.31133,-10 0/0:23.9284:4:4:129:0:0:0,-1.20412,-10 0/0:69.0829:19:19:652:0:0:0,-5.71957,-10 0/0:35.9696:8:8:245:0:0:0,-2.40824,-10 0/0:23.9284:4:4:152:0:0:0,-1.20412,-10 0/0:38.9799:9:9:315:0:0:0,-2.70927,-10 0/0:60.052:16:16:571:0:0:0,-4.81648,-10 0/0:35.9696:8:8:296:0:0:0,-2.40824,-10 0/0:93.1651:27:27:948:0:0:0,-8.12781,-10 0/0:16.1636:9:7:261:1:15:0,-0.15015,-10 0/0:54.0314:14:14:505:0:0:0,-4.21442,-10 0/0:41.9902:10:10:360:0:0:0,-3.0103,-10 0/0:26.9387:5:5:167:0:0:0,-1.50515,-10 0/0:26.9387:5:5:179:0:0:0,-1.50515,-10 0/0:51.0211:13:13:492:0:0:0,-3.91339,-10 0/0:78.1138:22:22:716:0:0:0,-6.62266,-10 0/0:69.0829:19:19:556:0:0:0,-5.71957,-10 0/0:38.9799:9:9:309:0:0:0,-2.70927,-10 0/0:38.9799:9:9:337:0:0:0,-2.70927,-10 0/0:20.9181:3:3:107:0:0:0,-0.90309,-9.98667 0/0:51.0211:13:13:456:0:0:0,-3.91339,-10 0/0:29.949:6:6:214:0:0:0,-1.80618,-10 0/0:14.8975:1:1:36:0:0:0,-0.30103,-3.6 0/0:51.0211:13:13:446:0:0:0,-3.91339,-10 0/0:51.0211:13:13:449:0:0:0,-3.91339,-10 0/0:48.0108:12:12:455:0:0:0,-3.61236,-10 scaffold_6 8245722 . C T 1435.05 . AB=0.528302;ABP=3.74778;AC=7;AF=0.0380435;AN=184;AO=58;CIGAR=1X;DP=1148;DPB=1148;DPRA=1.18792;EPP=6.75422;EPPR=3.34729;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9743;NS=92;NUMALT=1;ODDS=0.288421;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2109;QR=39650;RO=1089;RPP=128.956;RPPR=2307.33;RUN=1;SAF=34;SAP=6.75422;SAR=24;SRF=558;SRP=4.46393;SRR=531;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.4276:10:10:379:0:0:0,-3.0103,-10 0/0:32.3864:6:6:228:0:0:0,-1.80618,-10 0/0:77.5409:21:21:779:0:0:0,-6.32163,-10 0/0:35.3967:7:7:249:0:0:0,-2.10721,-10 0/0:47.4379:11:11:418:0:0:0,-3.31133,-10 0/0:47.4379:11:11:400:0:0:0,-3.31133,-10 0/1:99:22:12:442:10:379:-10,0,-10 0/0:68.51:18:18:643:0:0:0,-5.41854,-10 0/0:41.4173:9:9:316:0:0:0,-2.70927,-10 0/0:26.3658:4:4:149:0:0:0,-1.20412,-10 0/0:26.3658:4:4:149:0:0:0,-1.20412,-10 0/0:26.3658:4:4:152:0:0:0,-1.20412,-10 0/0:83.5614:23:23:802:0:0:0,-6.92369,-10 0/0:53.4585:13:13:468:0:0:0,-3.91339,-10 0/0:53.4585:13:13:462:0:0:0,-3.91339,-10 0/0:56.4688:14:14:470:0:0:0,-4.21442,-10 0/0:98.6117:28:28:1019:0:0:0,-8.42884,-10 0/0:26.3658:4:4:151:0:0:0,-1.20412,-10 0/0:56.4688:14:14:529:0:0:0,-4.21442,-10 0/1:99:15:9:340:6:226:-10,0,-10 0/0:2.27787:11:10:332:1:38:-1.53006,0,-10 0/1:99:21:12:456:9:311:-10,0,-10 0/0:26.3658:4:4:144:0:0:0,-1.20412,-10 0/0:53.4585:13:13:481:0:0:0,-3.91339,-10 0/0:38.407:8:8:298:0:0:0,-2.40824,-10 0/0:56.4688:14:14:528:0:0:0,-4.21442,-10 0/0:62.4894:16:16:603:0:0:0,-4.81648,-10 0/0:32.3864:6:6:226:0:0:0,-1.80618,-10 0/0:65.4997:17:17:609:0:0:0,-5.11751,-10 0/0:92.592:26:26:911:0:0:0,-7.82678,-10 0/0:41.4173:9:9:315:0:0:0,-2.70927,-10 0/0:38.407:8:8:300:0:0:0,-2.40824,-10 0/0:41.4173:9:9:322:0:0:0,-2.70927,-10 0/0:41.4173:9:9:286:0:0:0,-2.70927,-10 0/0:38.407:8:8:283:0:0:0,-2.40824,-10 0/0:29.3761:5:5:167:0:0:0,-1.50515,-10 0/0:65.4997:17:17:618:0:0:0,-5.11751,-10 0/0:47.4379:11:11:398:0:0:0,-3.31133,-10 0/0:47.4379:11:11:414:0:0:0,-3.31133,-10 0/0:41.4173:9:9:331:0:0:0,-2.70927,-10 0/0:77.5409:21:21:783:0:0:0,-6.32163,-10 0/0:35.8754:14:13:490:1:14:0,-1.66829,-10 0/0:38.407:8:8:280:0:0:0,-2.40824,-10 0/1:99:14:7:266:7:261:-10,0,-10 0/0:35.3967:7:7:256:0:0:0,-2.10721,-10 0/0:53.4585:13:13:457:0:0:0,-3.91339,-10 0/0:99:29:29:1085:0:0:0,-8.72987,-10 0/0:59.4791:15:15:526:0:0:0,-4.51545,-10 0/0:32.3864:6:6:206:0:0:0,-1.80618,-10 0/0:95.602:27:27:989:0:0:0,-8.12781,-10 0/0:44.4276:10:10:356:0:0:0,-3.0103,-10 0/0:89.5819:25:25:900:0:0:0,-7.52575,-10 0/0:44.4276:10:10:370:0:0:0,-3.0103,-10 0/0:23.3555:3:3:114:0:0:0,-0.90309,-10 0/0:95.602:27:27:959:0:0:0,-8.12781,-10 0/0:32.3864:6:6:206:0:0:0,-1.80618,-10 0/0:62.4894:16:16:564:0:0:0,-4.81648,-10 0/0:53.4585:13:13:480:0:0:0,-3.91339,-10 0/0:44.4276:10:10:370:0:0:0,-3.0103,-10 0/0:20.3452:2:2:72:0:0:0,-0.60206,-6.84 0/0:99:39:39:1436:0:0:0,-10,-10 0/0:35.3967:7:7:236:0:0:0,-2.10721,-10 0/0:74.5306:20:20:740:0:0:0,-6.0206,-10 0/0:41.4173:9:9:334:0:0:0,-2.70927,-10 0/0:41.4173:9:9:337:0:0:0,-2.70927,-10 0/0:80.5512:22:22:801:0:0:0,-6.62266,-10 0/0:47.4379:11:11:369:0:0:0,-3.31133,-10 0/0:26.3658:4:4:130:0:0:0,-1.20412,-10 0/0:71.5203:19:19:695:0:0:0,-5.71957,-10 0/0:38.407:8:8:300:0:0:0,-2.40824,-10 0/0:26.3658:4:4:152:0:0:0,-1.20412,-10 0/0:41.4173:9:9:320:0:0:0,-2.70927,-10 0/0:62.4894:16:16:600:0:0:0,-4.81648,-10 0/0:38.407:8:8:301:0:0:0,-2.40824,-10 0/0:95.602:27:27:1010:0:0:0,-8.12781,-10 0/0:41.4173:9:9:316:0:0:0,-2.70927,-10 0/0:56.4688:14:14:520:0:0:0,-4.21442,-10 0/0:44.4276:10:10:376:0:0:0,-3.0103,-10 0/0:29.3761:5:5:190:0:0:0,-1.50515,-10 0/0:29.3761:5:5:190:0:0:0,-1.50515,-10 0/0:53.4585:13:13:467:0:0:0,-3.91339,-10 0/0:77.5409:22:21:794:0:0:0,-6.32163,-10 0/1:99:19:4:128:15:540:-10,0,-9.70881 0/0:41.4173:9:9:327:0:0:0,-2.70927,-10 0/0:41.4173:9:9:328:0:0:0,-2.70927,-10 0/0:23.3555:3:3:114:0:0:0,-0.90309,-10 0/0:53.4585:13:13:455:0:0:0,-3.91339,-10 0/0:32.3864:6:6:217:0:0:0,-1.80618,-10 0/1:7.64629e-05:1:0:0:1:36:-3.6,-0.30103,0 0/0:53.4585:13:13:493:0:0:0,-3.91339,-10 0/1:99:14:6:223:8:304:-10,0,-10 0/0:50.4482:12:12:455:0:0:0,-3.61236,-10 scaffold_6 8245725 . C A 177.018 . AB=0.727273;ABP=7.94546;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1149;DPB=1149;DPRA=0.675795;EPP=5.18177;EPPR=3.44001;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9754;NS=92;NUMALT=1;ODDS=6.44983;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=319;QR=41308;RO=1137;RPP=22.5536;RPPR=2377.35;RUN=1;SAF=3;SAP=5.18177;SAR=6;SRF=587;SRP=5.62485;SRR=550;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.7536:10:10:370:0:0:0,-3.0103,-10 0/0:46.7124:6:6:227:0:0:0,-1.80618,-10 0/0:91.8664:21:21:760:0:0:0,-6.32163,-10 0/0:49.7227:7:7:244:0:0:0,-2.10721,-10 0/1:99:11:3:114:8:304:-10,0,-9.54615 0/0:61.7639:11:11:414:0:0:0,-3.31133,-10 0/0:97.8857:23:23:842:0:0:0,-6.92369,-10 0/0:82.8359:18:18:628:0:0:0,-5.41854,-10 0/0:55.7433:9:9:320:0:0:0,-2.70927,-10 0/0:40.6918:4:4:152:0:0:0,-1.20412,-10 0/0:40.6918:4:4:151:0:0:0,-1.20412,-10 0/0:40.6918:4:4:152:0:0:0,-1.20412,-10 0/0:97.8857:23:23:834:0:0:0,-6.92369,-10 0/0:67.7845:13:13:471:0:0:0,-3.91339,-10 0/0:64.7742:12:12:429:0:0:0,-3.61236,-10 0/0:70.7948:14:14:496:0:0:0,-4.21442,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:40.6918:4:4:152:0:0:0,-1.20412,-10 0/0:70.7948:14:14:531:0:0:0,-4.21442,-10 0/0:73.8051:15:15:546:0:0:0,-4.51545,-10 0/0:61.7639:11:11:334:0:0:0,-3.31133,-10 0/0:91.8664:21:21:735:0:0:0,-6.32163,-10 0/0:40.6918:4:4:143:0:0:0,-1.20412,-10 0/0:67.7845:13:13:483:0:0:0,-3.91339,-10 0/0:52.733:8:8:299:0:0:0,-2.40824,-10 0/0:70.7948:14:14:525:0:0:0,-4.21442,-10 0/0:76.8153:16:16:604:0:0:0,-4.81648,-10 0/0:0.00684366:6:5:188:1:15:-0.471971,0,-10 0/0:79.8256:17:17:602:0:0:0,-5.11751,-10 0/0:99:26:26:898:0:0:0,-7.82678,-10 0/0:55.7433:9:9:320:0:0:0,-2.70927,-10 0/0:52.733:8:8:304:0:0:0,-2.40824,-10 0/0:55.7433:9:9:327:0:0:0,-2.70927,-10 0/0:55.7433:9:9:289:0:0:0,-2.70927,-10 0/0:52.733:8:8:291:0:0:0,-2.40824,-10 0/0:43.7021:5:5:177:0:0:0,-1.50515,-10 0/0:79.8256:17:17:633:0:0:0,-5.11751,-10 0/0:61.7639:11:11:392:0:0:0,-3.31133,-10 0/0:61.7639:11:11:414:0:0:0,-3.31133,-10 0/0:55.7433:9:9:340:0:0:0,-2.70927,-10 0/0:91.8664:21:21:797:0:0:0,-6.32163,-10 0/0:70.7948:14:14:483:0:0:0,-4.21442,-10 0/0:52.733:8:8:281:0:0:0,-2.40824,-10 0/0:70.7948:14:14:531:0:0:0,-4.21442,-10 0/0:49.7227:7:7:222:0:0:0,-2.10721,-10 0/0:64.7742:13:12:411:0:0:0,-3.61236,-10 0/0:99:30:30:1085:0:0:0,-9.0309,-10 0/0:73.8051:15:15:542:0:0:0,-4.51545,-10 0/0:46.7124:6:6:206:0:0:0,-1.80618,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:58.7536:10:10:377:0:0:0,-3.0103,-10 0/0:99:25:25:903:0:0:0,-7.52575,-10 0/0:58.7536:10:10:355:0:0:0,-3.0103,-10 0/0:37.6815:3:3:114:0:0:0,-0.90309,-10 0/0:99:27:27:1001:0:0:0,-8.12781,-10 0/0:46.7124:6:6:224:0:0:0,-1.80618,-10 0/0:76.8153:16:16:579:0:0:0,-4.81648,-10 0/0:67.7845:13:13:447:0:0:0,-3.91339,-10 0/0:58.7536:10:10:379:0:0:0,-3.0103,-10 0/0:34.6712:2:2:74:0:0:0,-0.60206,-7.03 0/0:99:39:39:1430:0:0:0,-10,-10 0/0:49.7227:7:7:265:0:0:0,-2.10721,-10 0/0:88.8563:20:20:727:0:0:0,-6.0206,-10 0/0:55.7433:9:9:337:0:0:0,-2.70927,-10 0/0:55.7433:9:9:339:0:0:0,-2.70927,-10 0/0:94.8763:22:22:822:0:0:0,-6.62266,-10 0/0:61.7639:11:11:400:0:0:0,-3.31133,-10 0/0:37.6815:4:3:114:0:0:0,-0.90309,-10 0/0:85.8463:19:19:701:0:0:0,-5.71957,-10 0/0:52.733:8:8:304:0:0:0,-2.40824,-10 0/0:40.6918:4:4:152:0:0:0,-1.20412,-10 0/0:55.7433:9:9:313:0:0:0,-2.70927,-10 0/0:76.8153:16:16:608:0:0:0,-4.81648,-10 0/0:52.733:8:8:303:0:0:0,-2.40824,-10 0/0:99:27:27:963:0:0:0,-8.12781,-10 0/0:55.7433:9:9:317:0:0:0,-2.70927,-10 0/0:70.7948:14:14:497:0:0:0,-4.21442,-10 0/0:58.7536:10:10:355:0:0:0,-3.0103,-10 0/0:43.7021:5:5:168:0:0:0,-1.50515,-10 0/0:43.7021:5:5:181:0:0:0,-1.50515,-10 0/0:67.7845:13:13:471:0:0:0,-3.91339,-10 0/0:91.8664:22:21:766:0:0:0,-6.32163,-10 0/0:85.8463:19:19:666:0:0:0,-5.71957,-10 0/0:55.7433:9:9:315:0:0:0,-2.70927,-10 0/0:55.7433:9:9:330:0:0:0,-2.70927,-10 0/0:37.6815:3:3:92:0:0:0,-0.90309,-8.58667 0/0:67.7845:13:13:461:0:0:0,-3.91339,-10 0/0:46.7124:6:6:220:0:0:0,-1.80618,-10 0/0:31.6609:1:1:38:0:0:0,-0.30103,-3.8 0/0:67.7845:13:13:470:0:0:0,-3.91339,-10 0/0:70.7948:14:14:528:0:0:0,-4.21442,-10 0/0:64.7742:12:12:456:0:0:0,-3.61236,-10 scaffold_6 8245744 . T G 1438.46 . AB=0.537037;ABP=4.2971;AC=7;AF=0.0380435;AN=184;AO=60;CIGAR=1X;DP=1155;DPB=1155;DPRA=1.23084;EPP=133.299;EPPR=2369.92;GTI=2;LEN=1;MEANALT=1;MQM=59.7667;MQMR=59.9872;NS=92;NUMALT=1;ODDS=0.759592;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2121;QR=40598;RO=1094;RPP=5.32654;RPPR=3.80426;RUN=1;SAF=34;SAP=5.32654;SAR=26;SRF=556;SRP=3.65341;SRR=538;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.7244:11:11:415:0:0:0,-3.31133,-10 0/0:30.6729:6:6:228:0:0:0,-1.80618,-10 0/0:75.8274:21:21:783:0:0:0,-6.32163,-10 0/0:30.6729:6:6:228:0:0:0,-1.80618,-10 0/0:45.7244:11:11:418:0:0:0,-3.31133,-10 0/0:45.7244:11:11:396:0:0:0,-3.31133,-10 0/1:99:24:12:455:12:444:-10,0,-10 0/0:69.8068:19:19:706:0:0:0,-5.71957,-10 0/0:39.7038:9:9:340:0:0:0,-2.70927,-10 0/0:24.6523:4:4:152:0:0:0,-1.20412,-10 0/0:24.6523:4:4:151:0:0:0,-1.20412,-10 0/0:24.6523:4:4:152:0:0:0,-1.20412,-10 0/0:81.8479:23:23:868:0:0:0,-6.92369,-10 0/0:51.745:13:13:487:0:0:0,-3.91339,-10 0/0:48.7347:12:12:448:0:0:0,-3.61236,-10 0/0:51.745:14:13:487:0:0:0,-3.91339,-10 0/0:96.898:28:28:1033:0:0:0,-8.42884,-10 0/0:24.6523:4:4:151:0:0:0,-1.20412,-10 0/0:54.7553:14:14:532:0:0:0,-4.21442,-10 0/1:99:15:9:342:6:214:-10,0,-10 0/0:1.53512:11:10:355:1:35:-1.23006,0,-10 0/1:99:21:12:428:9:284:-10,0,-10 0/0:27.6626:5:5:189:0:0:0,-1.50515,-10 0/0:51.745:13:13:486:0:0:0,-3.91339,-10 0/0:33.6832:7:7:260:0:0:0,-2.10721,-10 0/0:54.7553:14:14:527:0:0:0,-4.21442,-10 0/0:60.7759:16:16:607:0:0:0,-4.81648,-10 0/0:30.6729:6:6:209:0:0:0,-1.80618,-10 0/0:39.1025:17:16:605:1:15:0,-2.38706,-10 0/0:90.8785:26:26:942:0:0:0,-7.82678,-10 0/0:39.7038:9:9:332:0:0:0,-2.70927,-10 0/0:36.6935:8:8:303:0:0:0,-2.40824,-10 0/0:39.7038:9:9:331:0:0:0,-2.70927,-10 0/0:39.7038:9:9:320:0:0:0,-2.70927,-10 0/0:36.6935:8:8:273:0:0:0,-2.40824,-10 0/0:27.6626:5:5:190:0:0:0,-1.50515,-10 0/0:63.7862:17:17:643:0:0:0,-5.11751,-10 0/0:45.7244:11:11:381:0:0:0,-3.31133,-10 0/0:45.7244:11:11:417:0:0:0,-3.31133,-10 0/0:39.7038:9:9:338:0:0:0,-2.70927,-10 0/0:75.8274:21:21:798:0:0:0,-6.32163,-10 0/0:57.7656:15:15:553:0:0:0,-4.51545,-10 0/0:36.6935:8:8:296:0:0:0,-2.40824,-10 0/1:99:14:7:265:7:266:-10,0,-10 0/0:33.6832:7:7:258:0:0:0,-2.10721,-10 0/0:51.745:13:13:460:0:0:0,-3.91339,-10 0/0:99:30:30:1133:0:0:0,-9.0309,-10 0/0:57.7656:15:15:554:0:0:0,-4.51545,-10 0/0:30.6729:6:6:224:0:0:0,-1.80618,-10 0/0:93.8884:27:27:992:0:0:0,-8.12781,-10 0/0:42.7141:10:10:380:0:0:0,-3.0103,-10 0/0:87.8684:25:25:928:0:0:0,-7.52575,-10 0/0:42.7141:10:10:375:0:0:0,-3.0103,-10 0/0:21.642:3:3:114:0:0:0,-0.90309,-10 0/0:96.898:28:28:1026:0:0:0,-8.42884,-10 0/0:30.6729:6:6:206:0:0:0,-1.80618,-10 0/0:60.7759:16:16:585:0:0:0,-4.81648,-10 0/0:51.745:13:13:488:0:0:0,-3.91339,-10 0/0:42.7141:10:10:380:0:0:0,-3.0103,-10 0/0:18.6317:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:39:39:1418:0:0:0,-10,-10 0/0:33.6832:7:7:266:0:0:0,-2.10721,-10 0/0:72.8171:20:20:742:0:0:0,-6.0206,-10 0/0:39.7038:9:9:331:0:0:0,-2.70927,-10 0/0:39.7038:9:9:342:0:0:0,-2.70927,-10 0/0:78.8376:22:22:822:0:0:0,-6.62266,-10 0/0:45.7244:11:11:395:0:0:0,-3.31133,-10 0/0:24.6523:4:4:145:0:0:0,-1.20412,-10 0/0:69.8068:19:19:710:0:0:0,-5.71957,-10 0/0:39.7038:9:9:333:0:0:0,-2.70927,-10 0/0:24.6523:4:4:152:0:0:0,-1.20412,-10 0/0:39.7038:9:9:335:0:0:0,-2.70927,-10 0/0:60.7759:16:16:608:0:0:0,-4.81648,-10 0/0:36.6935:8:8:296:0:0:0,-2.40824,-10 0/0:93.8884:27:27:1016:0:0:0,-8.12781,-10 0/0:39.7038:9:9:306:0:0:0,-2.70927,-10 0/0:57.7656:15:15:570:0:0:0,-4.51545,-10 0/0:42.7141:10:10:365:0:0:0,-3.0103,-10 0/0:27.6626:5:5:190:0:0:0,-1.50515,-10 0/0:27.6626:5:5:189:0:0:0,-1.50515,-10 0/0:51.745:13:13:492:0:0:0,-3.91339,-10 0/0:78.8376:22:22:786:0:0:0,-6.62266,-10 0/1:99:19:4:141:15:544:-10,0,-10 0/0:39.7038:9:9:337:0:0:0,-2.70927,-10 0/0:39.7038:9:9:342:0:0:0,-2.70927,-10 0/0:21.642:3:3:114:0:0:0,-0.90309,-10 0/0:51.745:13:13:463:0:0:0,-3.91339,-10 0/0:30.6729:6:6:215:0:0:0,-1.80618,-10 0/1:0.00011345:1:0:0:1:38:-3.8,-0.30103,0 0/0:51.745:13:13:494:0:0:0,-3.91339,-10 0/1:99:14:6:228:8:281:-10,0,-10 0/0:48.7347:12:12:456:0:0:0,-3.61236,-10 scaffold_6 8245771 . T C 33093.2 . AB=0.357143;ABP=7.97367;AC=183;AF=0.994565;AN=184;AO=11;CIGAR=2X;DP=1142;DPB=1142;DPRA=1.80328;EPP=3.20771;EPPR=5.8675;GTI=1;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.2632;NS=92;NUMALT=2;ODDS=3.3539;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=681;RO=19;RPP=26.8965;RPPR=44.2683;RUN=1;SAF=6;SAP=3.20771;SAR=5;SRF=12;SRP=5.8675;SRR=7;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1|1:42.2541:10:0:0:10,0:369,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:30.2129:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:75.3673:21:0:0:21,0:782,0:-10,-6.32163,0,-10,-6.32163,-10 1|1:30.2129:6:0:0:6,0:191,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:45.2644:11:0:0:11,0:418,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:45.2644:11:0:0:11,0:382,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:84.3982:24:0:0:24,0:893,0:-10,-7.22472,0,-10,-7.22472,-10 1|1:66.3365:18:0:0:18,0:659,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:39.2438:9:0:0:9,0:331,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:24.1923:4:0:0:4,0:152,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:24.1923:4:0:0:4,0:136,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:24.1923:4:0:0:4,0:151,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:81.3879:23:0:0:23,0:756,0:-10,-6.92369,0,-10,-6.92369,-10 1|1:48.2747:13:0:0:12,0:427,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:45.2644:11:0:0:11,0:383,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:54.2953:14:0:0:14,0:484,0:-10,-4.21442,0,-10,-4.21442,-10 0|1:99:28:18:660:0,10:0,347:-10,-10,-10,0,-10,-10 1|1:24.1923:4:0:0:4,0:143,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:54.2953:14:0:0:14,0:525,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:57.3056:15:0:0:15,0:539,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:45.2644:11:0:0:11,0:337,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:75.3673:21:0:0:21,0:756,0:-10,-6.32163,0,-10,-6.32163,-10 1|1:27.2026:5:0:0:5,0:182,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:51.285:13:0:0:13,0:469,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:33.2232:7:0:0:7,0:263,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:54.2953:14:0:0:14,0:523,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:60.3159:16:0:0:16,0:600,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:30.2129:6:0:0:6,0:218,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:60.3159:17:0:0:16,0:605,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:90.4187:26:0:0:26,0:884,0:-10,-7.82678,0,-10,-7.82678,-10 1|1:39.2438:9:0:0:9,0:320,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:36.2335:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:39.2438:9:0:0:9,0:312,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:39.2438:9:0:0:9,0:330,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:36.2335:8:0:0:8,0:282,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:24.1923:4:0:0:4,0:152,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:63.3262:17:0:0:17,0:590,0:-10,-5.11751,0,-10,-5.11751,-10 1|1:45.2644:11:0:0:11,0:394,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:45.2644:11:0:0:11,0:391,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:39.2438:9:0:0:9,0:334,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:75.3673:21:0:0:21,0:776,0:-10,-6.32163,0,-10,-6.32163,-10 1|1:57.3056:15:0:0:15,0:519,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:36.2335:8:0:0:8,0:291,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:54.2953:14:0:0:14,0:499,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:33.2232:7:0:0:7,0:265,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:51.285:13:0:0:13,0:420,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:99:30:0:0:30,0:1087,0:-10,-9.0309,0,-10,-9.0309,-10 1|1:57.3056:15:0:0:15,0:566,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:30.2129:6:0:0:6,0:217,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:93.4288:27:0:0:27,0:975,0:-10,-8.12781,0,-10,-8.12781,-10 1|1:42.2541:10:0:0:10,0:369,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:87.4085:25:0:0:25,0:887,0:-10,-7.52575,0,-10,-7.52575,-10 1|1:39.2438:9:0:0:9,0:338,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:21.182:3:0:0:3,0:114,0:-10,-0.90309,0,-10,-0.90309,-10 1|1:90.4187:26:0:0:26,0:950,0:-10,-7.82678,0,-10,-7.82678,-10 1|1:30.2129:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:54.6575:16:0:0:15,1:562,16:-10,-4.51545,0,-10,-2.01236,-10 1|1:51.285:13:0:0:13,0:494,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:42.2541:10:0:0:10,0:380,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:18.1717:2:0:0:2,0:67,0:-6.365,-0.60206,0,-6.365,-0.60206,-6.365 1|1:99:38:0:0:38,0:1400,0:-10,-10,0,-10,-10,-10 1|1:30.2129:6:0:0:6,0:225,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:72.3571:20:0:0:20,0:744,0:-10,-6.0206,0,-10,-6.0206,-10 1|1:39.2438:9:0:0:9,0:318,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:36.2335:8:0:0:8,0:291,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:78.3776:22:0:0:22,0:780,0:-10,-6.62266,0,-10,-6.62266,-10 1|1:45.2644:11:0:0:11,0:374,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:24.1923:4:0:0:4,0:150,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:66.3365:18:0:0:18,0:659,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:39.2438:9:0:0:9,0:332,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:24.1923:4:0:0:4,0:152,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:39.2438:9:0:0:9,0:327,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:60.3159:16:0:0:16,0:588,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:36.2335:8:0:0:8,0:297,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:93.4288:27:0:0:27,0:914,0:-10,-8.12781,0,-10,-8.12781,-10 1|1:0.120787:9:1:21:8,0:299,0:-10,0,-0.344973,-10,-2.75321,-10 1|1:57.3056:15:0:0:15,0:522,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:42.2541:10:0:0:10,0:375,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:27.2026:5:0:0:5,0:167,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:27.2026:5:0:0:5,0:190,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:51.285:13:0:0:13,0:475,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:75.3673:21:0:0:21,0:762,0:-10,-6.32163,0,-10,-6.32163,-10 1|1:69.3468:19:0:0:19,0:699,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:39.2438:9:0:0:9,0:326,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:36.2335:8:0:0:8,0:289,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:21.182:3:0:0:3,0:89,0:-8.30667,-0.90309,0,-8.30667,-0.90309,-8.30667 1|1:51.285:13:0:0:13,0:434,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:30.2129:6:0:0:6,0:204,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:15.1614:1:0:0:1,0:38,0:-3.8,-0.30103,0,-3.8,-0.30103,-3.8 1|1:51.285:13:0:0:13,0:489,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:54.2953:14:0:0:14,0:532,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:48.2747:12:0:0:12,0:453,0:-10,-3.61236,0,-10,-3.61236,-10 scaffold_6 8245772 . G A 33093.2 . AB=0.357143;ABP=7.97367;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=2X;DP=1142;DPB=1142;DPRA=1.80328;EPP=3.20771;EPPR=5.8675;GTI=1;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.2632;NS=92;NUMALT=2;ODDS=3.3539;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=363;QR=681;RO=19;RPP=26.8965;RPPR=44.2683;RUN=1;SAF=6;SAP=3.20771;SAR=5;SRF=12;SRP=5.8675;SRR=7;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:42.2541:10:0:0:10,0:369,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:30.2129:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:75.3673:21:0:0:21,0:782,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:30.2129:6:0:0:6,0:191,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:45.2644:11:0:0:11,0:418,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:45.2644:11:0:0:11,0:382,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:84.3982:24:0:0:24,0:893,0:-10,-7.22472,0,-10,-7.22472,-10 0|0:66.3365:18:0:0:18,0:659,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:39.2438:9:0:0:9,0:331,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:24.1923:4:0:0:4,0:152,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:24.1923:4:0:0:4,0:136,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:24.1923:4:0:0:4,0:151,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:81.3879:23:0:0:23,0:756,0:-10,-6.92369,0,-10,-6.92369,-10 0|0:48.2747:13:0:0:12,0:427,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:45.2644:11:0:0:11,0:383,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:54.2953:14:0:0:14,0:484,0:-10,-4.21442,0,-10,-4.21442,-10 0|1:99:28:18:660:0,10:0,347:-10,-10,-10,0,-10,-10 0|0:24.1923:4:0:0:4,0:143,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:54.2953:14:0:0:14,0:525,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:57.3056:15:0:0:15,0:539,0:-10,-4.51545,0,-10,-4.51545,-10 0|0:45.2644:11:0:0:11,0:337,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:75.3673:21:0:0:21,0:756,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:27.2026:5:0:0:5,0:182,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:51.285:13:0:0:13,0:469,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:33.2232:7:0:0:7,0:263,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:54.2953:14:0:0:14,0:523,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:60.3159:16:0:0:16,0:600,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:30.2129:6:0:0:6,0:218,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:60.3159:17:0:0:16,0:605,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:90.4187:26:0:0:26,0:884,0:-10,-7.82678,0,-10,-7.82678,-10 0|0:39.2438:9:0:0:9,0:320,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:36.2335:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:39.2438:9:0:0:9,0:312,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:39.2438:9:0:0:9,0:330,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:36.2335:8:0:0:8,0:282,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:24.1923:4:0:0:4,0:152,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:63.3262:17:0:0:17,0:590,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:45.2644:11:0:0:11,0:394,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:45.2644:11:0:0:11,0:391,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:39.2438:9:0:0:9,0:334,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:75.3673:21:0:0:21,0:776,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:57.3056:15:0:0:15,0:519,0:-10,-4.51545,0,-10,-4.51545,-10 0|0:36.2335:8:0:0:8,0:291,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:54.2953:14:0:0:14,0:499,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:33.2232:7:0:0:7,0:265,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:51.285:13:0:0:13,0:420,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:99:30:0:0:30,0:1087,0:-10,-9.0309,0,-10,-9.0309,-10 0|0:57.3056:15:0:0:15,0:566,0:-10,-4.51545,0,-10,-4.51545,-10 0|0:30.2129:6:0:0:6,0:217,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:93.4288:27:0:0:27,0:975,0:-10,-8.12781,0,-10,-8.12781,-10 0|0:42.2541:10:0:0:10,0:369,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:87.4085:25:0:0:25,0:887,0:-10,-7.52575,0,-10,-7.52575,-10 0|0:39.2438:9:0:0:9,0:338,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:21.182:3:0:0:3,0:114,0:-10,-0.90309,0,-10,-0.90309,-10 0|0:90.4187:26:0:0:26,0:950,0:-10,-7.82678,0,-10,-7.82678,-10 0|0:30.2129:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:54.6575:16:0:0:15,1:562,16:-10,-4.51545,0,-10,-2.01236,-10 0|0:51.285:13:0:0:13,0:494,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:42.2541:10:0:0:10,0:380,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:18.1717:2:0:0:2,0:67,0:-6.365,-0.60206,0,-6.365,-0.60206,-6.365 0|0:99:38:0:0:38,0:1400,0:-10,-10,0,-10,-10,-10 0|0:30.2129:6:0:0:6,0:225,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:72.3571:20:0:0:20,0:744,0:-10,-6.0206,0,-10,-6.0206,-10 0|0:39.2438:9:0:0:9,0:318,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:36.2335:8:0:0:8,0:291,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:78.3776:22:0:0:22,0:780,0:-10,-6.62266,0,-10,-6.62266,-10 0|0:45.2644:11:0:0:11,0:374,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:24.1923:4:0:0:4,0:150,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:66.3365:18:0:0:18,0:659,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:39.2438:9:0:0:9,0:332,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:24.1923:4:0:0:4,0:152,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:39.2438:9:0:0:9,0:327,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:60.3159:16:0:0:16,0:588,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:36.2335:8:0:0:8,0:297,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:93.4288:27:0:0:27,0:914,0:-10,-8.12781,0,-10,-8.12781,-10 0|0:0.120787:9:1:21:8,0:299,0:-10,0,-0.344973,-10,-2.75321,-10 0|0:57.3056:15:0:0:15,0:522,0:-10,-4.51545,0,-10,-4.51545,-10 0|0:42.2541:10:0:0:10,0:375,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:27.2026:5:0:0:5,0:167,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:27.2026:5:0:0:5,0:190,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:51.285:13:0:0:13,0:475,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:75.3673:21:0:0:21,0:762,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:69.3468:19:0:0:19,0:699,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:39.2438:9:0:0:9,0:326,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:36.2335:8:0:0:8,0:289,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:21.182:3:0:0:3,0:89,0:-8.30667,-0.90309,0,-8.30667,-0.90309,-8.30667 0|0:51.285:13:0:0:13,0:434,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:30.2129:6:0:0:6,0:204,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:15.1614:1:0:0:1,0:38,0:-3.8,-0.30103,0,-3.8,-0.30103,-3.8 0|0:51.285:13:0:0:13,0:489,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:54.2953:14:0:0:14,0:532,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:48.2747:12:0:0:12,0:453,0:-10,-3.61236,0,-10,-3.61236,-10 scaffold_6 8300367 . C T 1449.27 . AB=0.522727;ABP=3.20771;AC=4;AF=0.0217391;AN=184;AO=58;CIGAR=1X;DP=2090;DPB=2090;DPRA=1.11629;EPP=5.40641;EPPR=4.32003;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9498;NS=92;NUMALT=1;ODDS=5.5853;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2078;QR=74228;RO=2031;RPP=128.956;RPPR=4326.84;RUN=1;SAF=33;SAP=5.40641;SAR=25;SRF=1000;SRP=4.03777;SRR=1031;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.0343:10:10:352:0:0:0,-3.0103,-10 0/0:47.0549:12:12:434:0:0:0,-3.61236,-10 0/0:59.0961:16:16:603:0:0:0,-4.81648,-10 0/0:71.1373:20:20:734:0:0:0,-6.0206,-10 0/0:44.0446:11:11:407:0:0:0,-3.31133,-10 0/0:32.0034:7:7:265:0:0:0,-2.10721,-10 0/0:99:39:39:1429:0:0:0,-10,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:68.127:19:19:685:0:0:0,-5.71957,-10 0/0:32.0034:7:7:255:0:0:0,-2.10721,-10 0/0:38.024:9:9:318:0:0:0,-2.70927,-10 0/0:47.0549:12:12:428:0:0:0,-3.61236,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/0:99:40:40:1494:0:0:0,-10,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:92.2084:27:27:992:0:0:0,-8.12781,-10 0/0:44.0446:11:11:418:0:0:0,-3.31133,-10 0/0:41.0343:10:10:365:0:0:0,-3.0103,-10 0/0:65.1167:18:18:672:0:0:0,-5.41854,-10 0/0:99:56:56:1995:0:0:0,-10,-10 0/0:62.1064:17:17:640:0:0:0,-5.11751,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:62.1064:17:17:638:0:0:0,-5.11751,-10 0/0:80.1681:23:23:862:0:0:0,-6.92369,-10 0/0:89.1986:26:26:940:0:0:0,-7.82678,-10 0/0:83.1783:24:24:855:0:0:0,-7.22472,-10 0/0:71.1373:20:20:744:0:0:0,-6.0206,-10 0/0:62.1064:17:17:604:0:0:0,-5.11751,-10 0/0:86.1885:25:25:929:0:0:0,-7.52575,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:24.2994:12:11:417:1:16:0,-0.933179,-10 0/0:44.0446:11:11:406:0:0:0,-3.31133,-10 0/0:77.1578:22:22:750:0:0:0,-6.62266,-10 0/0:38.024:9:9:327:0:0:0,-2.70927,-10 0/0:99:36:36:1338:0:0:0,-10,-10 0/0:47.0549:12:12:444:0:0:0,-3.61236,-10 0/0:44.0446:11:11:378:0:0:0,-3.31133,-10 0/0:95.2177:28:28:1006:0:0:0,-8.42884,-10 0/0:59.0961:16:16:581:0:0:0,-4.81648,-10 0/0:56.0858:15:15:562:0:0:0,-4.51545,-10 0/0:99:45:45:1617:0:0:0,-10,-10 0/0:71.1373:20:20:741:0:0:0,-6.0206,-10 0/0:71.1373:20:20:742:0:0:0,-6.0206,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:92.2084:27:27:943:0:0:0,-8.12781,-10 0/0:95.2177:28:28:998:0:0:0,-8.42884,-10 0/0:99:50:50:1807:0:0:0,-10,-10 0/0:92.2084:27:27:942:0:0:0,-8.12781,-10 0/0:68.127:19:19:682:0:0:0,-5.71957,-10 0/0:99:45:45:1681:0:0:0,-10,-10 0/0:86.1885:25:25:893:0:0:0,-7.52575,-10 0/0:99:39:39:1428:0:0:0,-10,-10 0/0:50.0652:13:13:457:0:0:0,-3.91339,-10 0/0:41.0343:10:10:374:0:0:0,-3.0103,-10 0/0:99:57:57:2053:0:0:0,-10,-10 0/0:68.127:19:19:719:0:0:0,-5.71957,-10 0/0:98.226:29:29:1066:0:0:0,-8.72987,-10 0/0:53.0755:14:14:516:0:0:0,-4.21442,-10 0/0:74.1475:21:21:776:0:0:0,-6.32163,-10 0/0:62.1064:17:17:580:0:0:0,-5.11751,-10 0/0:99:39:39:1436:0:0:0,-10,-10 0/0:92.2084:27:27:1022:0:0:0,-8.12781,-10 0/0:99:38:38:1383:0:0:0,-10,-10 0/0:71.1373:20:20:749:0:0:0,-6.0206,-10 0/0:62.1064:17:17:618:0:0:0,-5.11751,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:68.127:19:19:714:0:0:0,-5.71957,-10 0/0:47.0549:12:12:452:0:0:0,-3.61236,-10 0/0:99:40:40:1471:0:0:0,-10,-10 0/0:68.127:19:19:719:0:0:0,-5.71957,-10 0/0:50.0652:13:13:455:0:0:0,-3.91339,-10 0/0:99:33:33:1202:0:0:0,-9.93399,-10 0/0:86.1885:25:25:900:0:0:0,-7.52575,-10 0/0:71.1373:20:20:748:0:0:0,-6.0206,-10 0/0:92.2084:27:27:1017:0:0:0,-8.12781,-10 0/0:65.1167:18:18:639:0:0:0,-5.41854,-10 0/0:41.0343:10:10:380:0:0:0,-3.0103,-10 0/0:47.0549:12:12:433:0:0:0,-3.61236,-10 0/0:41.0343:10:10:348:0:0:0,-3.0103,-10 0/0:47.0549:12:12:425:0:0:0,-3.61236,-10 0/0:69.7754:36:35:1275:1:38:0,-5.48078,-10 1/1:55.2316:34:0:0:33:1215:-10,-9.93399,0 0/1:99:28:13:485:15:509:-10,0,-10 0/1:99:16:8:302:8:300:-10,0,-10 0/0:99:33:33:1175:0:0:0,-9.93399,-10 0/0:25.9828:5:5:190:0:0:0,-1.50515,-10 0/0:92.2084:27:27:987:0:0:0,-8.12781,-10 0/0:77.1578:22:22:820:0:0:0,-6.62266,-10 0/0:28.9931:6:6:227:0:0:0,-1.80618,-10 0/0:62.1064:17:17:634:0:0:0,-5.11751,-10 0/0:80.1681:23:23:870:0:0:0,-6.92369,-10 0/0:59.0961:16:16:576:0:0:0,-4.81648,-10 scaffold_6 8425805 . T C 498.589 . AB=0.8;ABP=22.5536;AC=2;AF=0.0108696;AN=184;AO=22;CIGAR=1X;DP=1578;DPB=1578;DPRA=1.0978;EPP=9.32731;EPPR=19.8964;GTI=1;LEN=1;MEANALT=1;MQM=59.5909;MQMR=59.9126;NS=92;NUMALT=1;ODDS=6.37747;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=822;QR=56902;RO=1556;RPP=34.9902;RPPR=2652.99;RUN=1;SAF=13;SAP=4.58955;SAR=9;SRF=764;SRP=4.10441;SRR=792;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.8574:15:15:569:0:0:0,-4.51545,-10 0/0:42.7647:6:6:223:0:0:0,-1.80618,-10 0/0:78.8883:18:18:653:0:0:0,-5.41854,-10 0/0:69.8574:15:15:532:0:0:0,-4.51545,-10 0/0:48.7853:8:8:300:0:0:0,-2.40824,-10 0/0:42.7647:6:6:228:0:0:0,-1.80618,-10 0/0:99:35:35:1260:0:0:0,-10,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/0:51.7956:9:9:342:0:0:0,-2.70927,-10 0/0:33.7338:3:3:106:0:0:0,-0.90309,-9.89333 0/0:39.7544:5:5:190:0:0:0,-1.50515,-10 0/1:0.00013715:10:0:0:10:367:-10,-3.0103,0 0/0:99:30:30:1133:0:0:0,-9.0309,-10 0/0:99:34:34:1268:0:0:0,-10,-10 0/0:99:39:39:1386:0:0:0,-10,-10 0/0:90.9291:22:22:777:0:0:0,-6.62266,-10 0/0:75.878:17:17:617:0:0:0,-5.11751,-10 0/0:51.7956:9:9:334:0:0:0,-2.70927,-10 0/0:57.8162:11:11:407:0:0:0,-3.31133,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:66.8471:14:14:527:0:0:0,-4.21442,-10 0/0:87.919:21:21:791:0:0:0,-6.32163,-10 0/0:66.8471:14:14:511:0:0:0,-4.21442,-10 0/0:75.878:17:17:598:0:0:0,-5.11751,-10 0/0:60.8265:12:12:450:0:0:0,-3.61236,-10 0/0:78.8883:18:18:661:0:0:0,-5.41854,-10 0/0:87.919:21:21:755:0:0:0,-6.32163,-10 0/0:72.8677:16:16:591:0:0:0,-4.81648,-10 0/0:84.9088:20:20:735:0:0:0,-6.0206,-10 0/0:96.9484:24:24:872:0:0:0,-7.22472,-10 0/0:54.8059:10:10:370:0:0:0,-3.0103,-10 0/0:45.775:7:7:264:0:0:0,-2.10721,-10 0/0:72.8677:16:16:605:0:0:0,-4.81648,-10 0/0:99:25:25:933:0:0:0,-7.52575,-10 0/0:63.8368:13:13:479:0:0:0,-3.91339,-10 0/0:33.7338:3:3:114:0:0:0,-0.90309,-10 0/0:81.8986:19:19:711:0:0:0,-5.71957,-10 0/0:65.3747:31:30:1104:1:37:0,-4.14057,-10 0/0:54.8059:10:10:369:0:0:0,-3.0103,-10 0/0:69.8574:15:15:556:0:0:0,-4.51545,-10 0/0:99:26:26:956:0:0:0,-7.82678,-10 0/0:42.7647:6:6:225:0:0:0,-1.80618,-10 0/0:81.8986:19:19:643:0:0:0,-5.71957,-10 0/0:99:37:37:1384:0:0:0,-10,-10 0/0:48.7853:8:8:295:0:0:0,-2.40824,-10 0/0:54.8059:10:10:335:0:0:0,-3.0103,-10 0/0:99:31:31:1157:0:0:0,-9.33193,-10 0/0:99:26:26:940:0:0:0,-7.82678,-10 0/0:54.8059:10:10:371:0:0:0,-3.0103,-10 0/0:99:43:43:1556:0:0:0,-10,-10 0/0:54.8059:10:10:380:0:0:0,-3.0103,-10 0/0:99:36:36:1311:0:0:0,-10,-10 0/0:75.878:17:17:612:0:0:0,-5.11751,-10 0/0:39.7544:5:5:178:0:0:0,-1.50515,-10 0/0:99:43:43:1555:0:0:0,-10,-10 0/0:60.8265:12:12:416:0:0:0,-3.61236,-10 0/0:75.878:17:17:604:0:0:0,-5.11751,-10 0/0:42.7647:6:6:222:0:0:0,-1.80618,-10 0/0:81.8986:19:19:682:0:0:0,-5.71957,-10 0/0:45.775:7:7:262:0:0:0,-2.10721,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:63.8368:13:13:483:0:0:0,-3.91339,-10 0/0:99:34:34:1275:0:0:0,-10,-10 0/1:99:15:5:186:10:380:-10,0,-10 0/0:35.2841:19:18:679:1:38:0,-0.640816,-10 0/0:90.9291:22:22:744:0:0:0,-6.62266,-10 0/0:63.8368:13:13:491:0:0:0,-3.91339,-10 0/0:48.7853:8:8:279:0:0:0,-2.40824,-10 0/0:78.8883:18:18:676:0:0:0,-5.41854,-10 0/0:69.8574:15:15:556:0:0:0,-4.51545,-10 0/0:72.8677:16:16:590:0:0:0,-4.81648,-10 0/0:87.919:21:21:791:0:0:0,-6.32163,-10 0/0:99:25:25:883:0:0:0,-7.52575,-10 0/0:63.8368:13:13:470:0:0:0,-3.91339,-10 0/0:99:32:32:1183:0:0:0,-9.63296,-10 0/0:51.7956:9:9:336:0:0:0,-2.70927,-10 0/0:39.7544:5:5:190:0:0:0,-1.50515,-10 0/0:51.7956:9:9:313:0:0:0,-2.70927,-10 0/0:27.7132:1:1:38:0:0:0,-0.30103,-3.8 0/0:42.7647:6:6:225:0:0:0,-1.80618,-10 0/0:99:30:30:1071:0:0:0,-9.0309,-10 0/0:99:36:36:1307:0:0:0,-10,-10 0/0:54.8059:10:10:310:0:0:0,-3.0103,-10 0/0:72.8677:16:16:586:0:0:0,-4.81648,-10 0/0:78.8883:18:18:656:0:0:0,-5.41854,-10 0/0:39.7544:5:5:187:0:0:0,-1.50515,-10 0/0:57.8162:11:11:416:0:0:0,-3.31133,-10 0/0:54.8059:10:10:364:0:0:0,-3.0103,-10 0/0:45.775:7:7:235:0:0:0,-2.10721,-10 0/0:72.8677:16:16:604:0:0:0,-4.81648,-10 0/0:54.8059:10:10:353:0:0:0,-3.0103,-10 0/0:66.8471:14:14:519:0:0:0,-4.21442,-10 scaffold_6 8430837 . C T 1390.12 . AB=0.276995;ABP=95.0175;AC=5;AF=0.0271739;AN=184;AO=63;CIGAR=1X;DP=3604;DPB=3604;DPRA=1.08665;EPP=3.872;EPPR=4.14418;GTI=0;LEN=1;MEANALT=1;MQM=59.7778;MQMR=59.9627;NS=92;NUMALT=1;ODDS=4.51336;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2295;QR=128976;RO=3541;RPP=139.813;RPPR=7614.22;RUN=1;SAF=29;SAP=3.872;SAR=34;SRF=1752;SRP=3.84982;SRR=1789;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:30:30:1085:0:0:0,-9.0309,-10 0/0:82.3369:8:8:277:0:0:0,-2.40824,-10 0/0:99:42:42:1505:0:0:0,-10,-10 0/0:99:29:29:1006:0:0:0,-8.72987,-10 0/0:99:17:17:618:0:0:0,-5.11751,-10 0/0:85.3468:9:9:318:0:0:0,-2.70927,-10 0/0:99:92:92:3346:0:0:0,-10,-10 0/0:99:59:59:2166:0:0:0,-10,-10 0/0:99:38:38:1388:0:0:0,-10,-10 0/0:79.3269:7:7:249:0:0:0,-2.10721,-10 0/0:91.368:11:11:414:0:0:0,-3.31133,-10 0/0:99:14:14:512:0:0:0,-4.21442,-10 0/0:99:53:53:1936:0:0:0,-10,-10 0/0:99:84:84:3016:0:0:0,-10,-10 0/0:99:45:45:1644:0:0:0,-10,-10 0/0:99:47:47:1746:0:0:0,-10,-10 0/0:99:33:33:1207:0:0:0,-9.93399,-10 0/0:99:20:20:714:0:0:0,-6.0206,-10 0/0:99:41:41:1475:0:0:0,-10,-10 0/1:99:69:47:1751:22:831:-10,0,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/1:99:53:42:1584:11:390:-10,0,-10 0/0:99:22:22:821:0:0:0,-6.62266,-10 0/0:99:34:34:1232:0:0:0,-10,-10 0/0:99:43:43:1616:0:0:0,-10,-10 0/0:99:47:47:1718:0:0:0,-10,-10 0/0:99:37:37:1312:0:0:0,-10,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:99:40:39:1449:1:38:0,-6.63914,-10 0/0:99:87:87:3157:0:0:0,-10,-10 0/0:91.368:11:11:401:0:0:0,-3.31133,-10 0/0:99:17:17:629:0:0:0,-5.11751,-10 0/0:99:35:35:1239:0:0:0,-10,-10 0/0:99:19:19:690:0:0:0,-5.71957,-10 0/0:99:44:43:1477:1:38:0,-7.80187,-10 0/0:99:16:16:597:0:0:0,-4.81648,-10 0/0:99:21:21:744:0:0:0,-6.32163,-10 0/1:19.6486:53:48:1761:5:187:-7.70724,0,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:99:33:33:1182:0:0:0,-9.93399,-10 0/0:99:64:64:2366:0:0:0,-10,-10 0/0:99:41:39:1438:2:54:0,-4.29842,-10 0/0:99:52:52:1869:0:0:0,-10,-10 0/0:99:70:70:2552:0:0:0,-10,-10 0/0:99:40:40:1473:0:0:0,-10,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:99:102:102:3682:0:0:0,-10,-10 0/0:99:49:49:1812:0:0:0,-10,-10 0/0:99:27:27:1003:0:0:0,-8.12781,-10 0/0:99:79:79:2848:0:0:0,-10,-10 0/1:99:16:7:260:9:317:-10,0,-10 0/0:99:89:89:3188:0:0:0,-10,-10 0/0:99:31:31:1109:0:0:0,-9.33193,-10 0/0:94.3728:12:12:425:0:0:0,-3.61236,-10 0/0:99:88:88:3168:0:0:0,-10,-10 0/0:99:31:31:1150:0:0:0,-9.33193,-10 0/0:99:40:40:1478:0:0:0,-10,-10 0/0:94.3728:12:12:426:0:0:0,-3.61236,-10 0/0:99:36:36:1304:0:0:0,-10,-10 0/1:99:22:10:333:12:440:-10,0,-10 0/0:99:54:54:1994:0:0:0,-10,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:99:77:77:2794:0:0:0,-10,-10 0/0:99:43:43:1580:0:0:0,-10,-10 0/0:99:26:26:964:0:0:0,-7.82678,-10 0/0:99:49:49:1791:0:0:0,-10,-10 0/0:99:38:38:1415:0:0:0,-10,-10 0/0:99:17:17:604:0:0:0,-5.11751,-10 0/0:99:93:93:3356:0:0:0,-10,-10 0/0:99:24:24:898:0:0:0,-7.22472,-10 0/0:99:36:36:1292:0:0:0,-10,-10 0/0:99:64:64:2344:0:0:0,-10,-10 0/0:99:41:41:1545:0:0:0,-10,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:99:66:66:2350:0:0:0,-10,-10 0/0:99:24:24:887:0:0:0,-7.22472,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:99:24:24:857:0:0:0,-7.22472,-10 0/0:76.3165:6:6:224:0:0:0,-1.80618,-10 0/0:99:17:17:618:0:0:0,-5.11751,-10 0/0:99:65:65:2346:0:0:0,-10,-10 0/0:99:56:56:2034:0:0:0,-10,-10 0/0:99:50:50:1863:0:0:0,-10,-10 0/0:99:47:47:1754:0:0:0,-10,-10 0/0:99:45:45:1653:0:0:0,-10,-10 0/0:76.3165:6:6:228:0:0:0,-1.80618,-10 0/0:99:43:43:1584:0:0:0,-10,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:99:18:18:655:0:0:0,-5.41854,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:99:27:27:977:0:0:0,-8.12781,-10 0/0:99:26:26:897:0:0:0,-7.82678,-10 scaffold_6 8430862 . G A 358.649 . AB=0.233766;ABP=50.4161;AC=2;AF=0.0108696;AN=184;AO=22;CIGAR=1X;DP=3598;DPB=3598;DPRA=1.24713;EPP=3.0103;EPPR=19.5469;GTI=0;LEN=1;MEANALT=1;MQM=58.6364;MQMR=59.9676;NS=92;NUMALT=1;ODDS=1.03519;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=766;QR=129296;RO=3575;RPP=50.7827;RPPR=6872.62;RUN=1;SAF=11;SAP=3.0103;SAR=11;SRF=1764;SRP=4.35206;SRR=1811;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:30:30:1039:0:0:0,-9.0309,-10 0/0:99:8:8:269:0:0:0,-2.40824,-10 0/0:99:42:42:1554:0:0:0,-10,-10 0/0:99:29:29:1029:0:0:0,-8.72987,-10 0/0:99:17:17:641:0:0:0,-5.11751,-10 0/0:99:9:9:294:0:0:0,-2.70927,-10 0/0:99:91:91:3298:0:0:0,-10,-10 0/0:99:59:59:2175:0:0:0,-10,-10 0/0:99:38:38:1404:0:0:0,-10,-10 0/1:5.81568:7:5:189:2:75:-6.34001,0,-10 0/0:99:11:11:418:0:0:0,-3.31133,-10 0/0:99:14:14:525:0:0:0,-4.21442,-10 0/0:99:53:53:1877:0:0:0,-10,-10 0/0:99:84:84:2974:0:0:0,-10,-10 0/0:99:45:45:1668:0:0:0,-10,-10 0/0:99:47:47:1680:0:0:0,-10,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:99:20:20:732:0:0:0,-6.0206,-10 0/0:99:41:41:1464:0:0:0,-10,-10 0/0:99:69:69:2488:0:0:0,-10,-10 0/0:99:30:30:1053:0:0:0,-9.0309,-10 0/0:99:52:52:1888:0:0:0,-10,-10 0/0:99:21:21:779:0:0:0,-6.32163,-10 0/0:99:34:34:1252:0:0:0,-10,-10 0/0:99:43:43:1544:0:0:0,-10,-10 0/0:99:47:46:1642:1:38:0,-8.67631,-10 0/0:99:37:37:1262:0:0:0,-10,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:99:40:40:1471:0:0:0,-10,-10 0/0:99:87:86:3042:0:0:0,-10,-10 0/0:99:11:11:385:0:0:0,-3.31133,-10 0/0:99:17:17:635:0:0:0,-5.11751,-10 0/0:99:35:35:1266:0:0:0,-10,-10 0/0:83.6398:19:18:658:1:38:0,-0.640816,-10 0/0:99:44:44:1580:0:0:0,-10,-10 0/0:99:16:16:586:0:0:0,-4.81648,-10 0/0:99:21:21:787:0:0:0,-6.32163,-10 0/0:99:53:53:1890:0:0:0,-10,-10 0/0:99:27:27:1004:0:0:0,-8.12781,-10 0/0:99:33:33:1156:0:0:0,-9.93399,-10 0/0:99:64:64:2345:0:0:0,-10,-10 0/0:99:41:41:1478:0:0:0,-10,-10 0/0:99:52:52:1877:0:0:0,-10,-10 0/1:99:70:54:1934:16:585:-10,0,-10 0/0:99:40:40:1468:0:0:0,-10,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:99:102:102:3629:0:0:0,-10,-10 0/0:99:48:48:1785:0:0:0,-10,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/0:99:79:78:2819:1:15:0,-10,-10 0/0:99:16:16:568:0:0:0,-4.81648,-10 0/0:99:89:89:3163:0:0:0,-10,-10 0/0:99:31:31:1099:0:0:0,-9.33193,-10 0/0:99:12:12:451:0:0:0,-3.61236,-10 0/0:99:88:88:3233:0:0:0,-10,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:99:40:40:1459:0:0:0,-10,-10 0/0:99:12:12:398:0:0:0,-3.61236,-10 0/0:99:35:35:1276:0:0:0,-10,-10 0/0:99:22:22:789:0:0:0,-6.62266,-10 0/0:99:54:54:1956:0:0:0,-10,-10 0/0:99:32:32:1127:0:0:0,-9.63296,-10 0/0:99:77:77:2711:0:0:0,-10,-10 0/0:99:43:43:1554:0:0:0,-10,-10 0/0:99:26:26:925:0:0:0,-7.82678,-10 0/0:99:49:49:1779:0:0:0,-10,-10 0/0:99:38:38:1397:0:0:0,-10,-10 0/0:99:17:17:588:0:0:0,-5.11751,-10 0/0:99:93:93:3350:0:0:0,-10,-10 0/0:99:24:24:868:0:0:0,-7.22472,-10 0/0:99:36:36:1347:0:0:0,-10,-10 0/0:99:64:64:2283:0:0:0,-10,-10 0/0:99:41:41:1450:0:0:0,-10,-10 0/0:99:31:31:1165:0:0:0,-9.33193,-10 0/0:99:66:65:2356:1:15:0,-10,-10 0/0:99:24:24:890:0:0:0,-7.22472,-10 0/0:99:24:24:904:0:0:0,-7.22472,-10 0/0:99:24:24:866:0:0:0,-7.22472,-10 0/0:95.8919:6:6:228:0:0:0,-1.80618,-10 0/0:99:17:17:588:0:0:0,-5.11751,-10 0/0:99:64:64:2320:0:0:0,-10,-10 0/0:99:56:56:2038:0:0:0,-10,-10 0/0:99:50:50:1863:0:0:0,-10,-10 0/0:99:47:47:1748:0:0:0,-10,-10 0/0:99:45:45:1637:0:0:0,-10,-10 0/0:95.8919:6:6:215:0:0:0,-1.80618,-10 0/0:99:43:43:1559:0:0:0,-10,-10 0/0:99:29:29:1027:0:0:0,-8.72987,-10 0/0:99:18:18:679:0:0:0,-5.41854,-10 0/0:99:32:32:1201:0:0:0,-9.63296,-10 0/0:99:27:27:1016:0:0:0,-8.12781,-10 0/0:99:26:26:874:0:0:0,-7.82678,-10 scaffold_6 8439592 . A G 6549.46 . AB=0.568889;ABP=12.2849;AC=20;AF=0.108696;AN=184;AO=240;CIGAR=1X;DP=1858;DPB=1858;DPRA=1.13737;EPP=4.78367;EPPR=5.27332;GTI=1;LEN=1;MEANALT=1;MQM=59.7625;MQMR=59.9746;NS=92;NUMALT=1;ODDS=0.582154;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8686;QR=57872;RO=1613;RPP=524.164;RPPR=3505.6;RUN=1;SAF=127;SAP=4.78367;SAR=113;SRF=827;SRP=5.27332;SRR=786;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.9979:16:16:545:0:0:0,-4.81648,-10 0/0:26.9155:8:8:285:0:0:0,-2.40824,-10 0/1:99:19:7:261:12:423:-10,0,-10 0/0:44.9773:14:14:491:0:0:0,-4.21442,-10 0/0:26.9155:8:8:272:0:0:0,-2.40824,-10 0/0:41.967:13:13:493:0:0:0,-3.91339,-10 0/0:99:37:37:1293:0:0:0,-10,-10 1/1:77.9208:31:0:0:31:1052:-10,-9.33193,0 0/0:41.967:13:13:455:0:0:0,-3.91339,-10 0/0:5.84343:1:1:38:0:0:0,-0.30103,-3.8 0/0:17.8846:5:5:165:0:0:0,-1.50515,-10 0/0:26.9155:8:8:298:0:0:0,-2.40824,-10 0/0:78.0906:25:25:879:0:0:0,-7.52575,-10 0/0:99:32:32:1109:0:0:0,-9.63296,-10 0/0:84.1112:27:27:989:0:0:0,-8.12781,-10 0/0:38.9567:12:12:443:0:0:0,-3.61236,-10 0/0:60.0288:19:19:641:0:0:0,-5.71957,-10 0/0:26.9155:8:8:298:0:0:0,-2.40824,-10 0/0:90.1315:29:29:1033:0:0:0,-8.72987,-10 0/0:99:35:35:1235:0:0:0,-10,-10 0/0:32.9361:10:10:354:0:0:0,-3.0103,-10 0/0:78.0906:25:25:933:0:0:0,-7.52575,-10 0/0:47.9876:15:15:512:0:0:0,-4.51545,-10 0/1:99:21:8:282:13:482:-10,0,-10 0/0:69.0597:22:22:753:0:0:0,-6.62266,-10 0/1:99:34:16:590:18:647:-10,0,-10 0/0:57.0185:18:18:662:0:0:0,-5.41854,-10 0/0:57.0185:18:18:646:0:0:0,-5.41854,-10 0/0:69.0597:22:22:808:0:0:0,-6.62266,-10 0/0:99:42:42:1476:0:0:0,-10,-10 0/0:11.864:3:3:112:0:0:0,-0.90309,-10 0/0:26.9155:8:8:264:0:0:0,-2.40824,-10 1/1:53.8385:23:0:0:23:841:-10,-6.92369,0 0/0:20.8949:6:6:204:0:0:0,-1.80618,-10 0/0:54.0082:17:17:620:0:0:0,-5.11751,-10 0/0:32.9361:10:10:361:0:0:0,-3.0103,-10 0/0:20.8949:6:6:198:0:0:0,-1.80618,-10 0/0:75.0803:24:24:887:0:0:0,-7.22472,-10 0/0:75.0803:24:24:864:0:0:0,-7.22472,-10 0/1:99:19:9:330:10:366:-10,0,-10 0/1:99:31:12:451:19:707:-10,0,-10 0/0:66.0494:21:21:741:0:0:0,-6.32163,-10 0/0:69.0597:22:22:782:0:0:0,-6.62266,-10 0/0:99:45:44:1630:0:0:0,-10,-10 0/0:54.0082:17:17:616:0:0:0,-5.11751,-10 0/0:41.967:13:13:453:0:0:0,-3.91339,-10 0/0:99:57:57:2069:0:0:0,-10,-10 0/0:87.1209:28:28:1028:0:0:0,-8.42884,-10 0/0:44.9773:14:14:498:0:0:0,-4.21442,-10 0/0:99:45:44:1619:0:0:0,-10,-10 1/1:44.8076:20:0:0:20:723:-10,-6.0206,0 0/1:99:34:14:493:20:744:-10,0,-10 0/0:47.9876:15:15:546:0:0:0,-4.51545,-10 0/0:32.9361:10:10:378:0:0:0,-3.0103,-10 0/0:99:51:50:1767:0:0:0,-10,-10 0/0:72.07:23:23:818:0:0:0,-6.92369,-10 0/1:99:19:11:349:8:279:-10,0,-10 0/0:26.9155:9:8:267:0:0:0,-2.40824,-10 0/0:69.0597:22:22:762:0:0:0,-6.62266,-10 0/0:47.9876:15:15:519:0:0:0,-4.51545,-10 0/0:87.1209:28:28:1062:0:0:0,-8.42884,-10 0/0:54.0082:17:17:636:0:0:0,-5.11751,-10 0/0:99:40:40:1476:0:0:0,-10,-10 0/0:63.0391:20:20:703:0:0:0,-6.0206,-10 0/0:60.0288:19:19:698:0:0:0,-5.71957,-10 0/1:99:21:8:278:13:471:-10,0,-10 0/1:99:23:12:444:11:391:-10,0,-10 0/0:50.9979:16:16:563:0:0:0,-4.81648,-10 0/0:99:37:37:1314:0:0:0,-10,-10 0/0:35.9464:11:11:396:0:0:0,-3.31133,-10 0/0:72.07:23:23:841:0:0:0,-6.92369,-10 0/0:90.1315:30:29:1085:0:0:0,-8.72987,-10 0/0:57.0185:18:18:655:0:0:0,-5.41854,-10 0/0:54.0082:17:17:589:0:0:0,-5.11751,-10 0/0:96.1511:31:31:1082:0:0:0,-9.33193,-10 0/0:54.0082:17:17:590:0:0:0,-5.11751,-10 0/0:41.967:13:13:463:0:0:0,-3.91339,-10 1/1:11.6943:9:0:0:9:329:-10,-2.70927,0 0/1:0.123869:4:0:0:4:147:-10,-1.20412,0 0/0:44.9773:14:14:507:0:0:0,-4.21442,-10 1/1:71.9003:29:0:0:29:1084:-10,-8.72987,0 0/0:81.1009:26:26:961:0:0:0,-7.82678,-10 0/0:72.07:23:23:818:0:0:0,-6.92369,-10 0/0:63.0391:20:20:736:0:0:0,-6.0206,-10 0/0:60.0288:19:19:715:0:0:0,-5.71957,-10 0/0:14.8743:4:4:148:0:0:0,-1.20412,-10 0/0:35.9464:11:11:383:0:0:0,-3.31133,-10 0/0:72.07:23:23:833:0:0:0,-6.92369,-10 0/0:14.8743:4:4:141:0:0:0,-1.20412,-10 0/0:41.967:13:13:423:0:0:0,-3.91339,-10 0/0:57.0185:18:18:673:0:0:0,-5.41854,-10 0/0:69.0597:22:22:794:0:0:0,-6.62266,-10 scaffold_6 8562361 . G A 8897.16 . AB=0.479592;ABP=4.4284;AC=34;AF=0.184783;AN=184;AO=343;CIGAR=1X;DP=1773;DPB=1773;DPRA=1.13772;EPP=3.5231;EPPR=5.32157;GTI=2;LEN=1;MEANALT=1.03704;MQM=54.5714;MQMR=59.6165;NS=92;NUMALT=1;ODDS=2.43908;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11894;QR=52125;RO=1429;RPP=747.825;RPPR=3097.36;RUN=1;SAF=167;SAP=3.5231;SAR=176;SRF=735;SRP=5.56471;SRR=694;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:18.0887:19:1:16:18:657:-10,-2.84082,0 0/0:38.8009:11:11:364:0:0:0,-3.31133,-10 0/0:38.8009:11:11:400:0:0:0,-3.31133,-10 0/0:53.8524:16:16:584:0:0:0,-4.81648,-10 0/1:99:13:5:189:8:290:-10,0,-10 0/0:29.77:8:8:304:0:0:0,-2.40824,-10 1/1:99:42:0:0:42:1428:-10,-10,0 0/1:99:22:10:368:12:431:-10,0,-10 1/1:34.6717:16:0:0:16:587:-10,-4.81648,0 0/0:26.7597:7:7:259:0:0:0,-2.10721,-10 0/0:26.7597:7:7:260:0:0:0,-2.10721,-10 0/0:38.8009:11:11:367:0:0:0,-3.31133,-10 0/1:99:26:16:607:10:295:-10,0,-10 0/1:99:21:14:523:7:235:-10,0,-10 0/0:74.9245:23:23:850:0:0:0,-6.92369,-10 0/0:80.945:25:25:944:0:0:0,-7.52575,-10 0/1:99:29:16:566:13:423:-10,0,-10 0/0:29.77:8:8:276:0:0:0,-2.40824,-10 0/0:77.9348:24:24:894:0:0:0,-7.22472,-10 0/1:99:31:17:630:14:474:-10,0,-10 0/1:99:12:4:152:8:290:-10,0,-10 0/1:99:30:17:618:13:422:-10,0,-10 0/0:41.8112:12:12:453:0:0:0,-3.61236,-10 0/0:65.8936:20:20:751:0:0:0,-6.0206,-10 0/0:68.9039:21:21:777:0:0:0,-6.32163,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:50.8421:15:15:534:0:0:0,-4.51545,-10 0/0:68.9039:21:21:759:0:0:0,-6.32163,-10 0/0:89.9753:28:28:993:0:0:0,-8.42884,-10 0/0:99:51:51:1873:0:0:0,-10,-10 0/0:11.7082:2:2:74:0:0:0,-0.60206,-7.03 0/0:26.7597:7:7:227:0:0:0,-2.10721,-10 0/0:65.8936:20:20:747:0:0:0,-6.0206,-10 0/0:32.7803:9:9:317:0:0:0,-2.70927,-10 0/0:62.8833:19:19:699:0:0:0,-5.71957,-10 0/0:23.7494:6:6:224:0:0:0,-1.80618,-10 0/0:53.8524:16:16:590:0:0:0,-4.81648,-10 0/0:92.9849:29:29:1051:0:0:0,-8.72987,-10 0/0:80.945:25:25:906:0:0:0,-7.52575,-10 0/0:47.8318:14:14:523:0:0:0,-4.21442,-10 0/0:99:36:36:1324:0:0:0,-10,-10 0/0:65.8936:20:20:732:0:0:0,-6.0206,-10 1/1:22.6305:12:0:0:12:435:-10,-3.61236,0 0/0:89.9753:28:28:1026:0:0:0,-8.42884,-10 0/1:99:21:10:369:11:363:-10,0,-10 0/1:99:17:9:342:8:278:-10,0,-10 0/1:99:41:21:790:20:654:-10,0,-10 0/0:92.9849:29:29:1030:0:0:0,-8.72987,-10 0/0:41.8112:12:12:445:0:0:0,-3.61236,-10 0/0:99:45:45:1592:0:0:0,-10,-10 1/1:19.6202:12:0:0:11:355:-10,-3.31133,0 0/0:95.9938:30:30:1076:0:0:0,-9.0309,-10 0/0:26.7597:7:7:266:0:0:0,-2.10721,-10 0/0:23.7494:6:6:226:0:0:0,-1.80618,-10 0/1:99:41:27:988:14:484:-10,0,-10 0/0:38.8009:11:11:408:0:0:0,-3.31133,-10 0/0:29.9953:21:20:713:1:29:0,-2.09941,-10 0/0:20.7391:5:5:164:0:0:0,-1.50515,-10 0/0:56.8627:17:17:632:0:0:0,-5.11751,-10 0/0:38.8009:11:11:401:0:0:0,-3.31133,-10 0/1:99:24:8:290:16:570:-10,0,-10 0/0:68.9039:21:21:752:0:0:0,-6.32163,-10 0/0:99:38:38:1358:0:0:0,-10,-10 0/1:99:11:7:265:4:151:-10,0,-10 0/0:41.8112:12:12:452:0:0:0,-3.61236,-10 0/1:99:37:22:797:15:527:-10,0,-10 0/0:44.8215:13:13:490:0:0:0,-3.91339,-10 0/0:50.8421:15:15:561:0:0:0,-4.51545,-10 0/0:99:43:43:1602:0:0:0,-10,-10 0/0:35.7906:10:10:373:0:0:0,-3.0103,-10 1/1:25.6408:13:0:0:13:482:-10,-3.91339,0 0/0:99:34:34:1212:0:0:0,-10,-10 0/0:56.8627:17:17:617:0:0:0,-5.11751,-10 0/0:47.8318:14:14:513:0:0:0,-4.21442,-10 0/0:89.9753:28:28:978:0:0:0,-8.42884,-10 0/0:53.8524:16:16:596:0:0:0,-4.81648,-10 1/1:43.7026:19:0:0:19:682:-10,-5.71957,0 0/1:25.6814:13:1:38:12:401:-10,0,-1.00055 0/1:0.113335:1:0:0:1:31:-3.1,-0.30103,0 0/0:65.8936:20:20:725:0:0:0,-6.0206,-10 1/1:55.7438:23:0:0:23:844:-10,-6.92369,0 0/0:92.9849:29:29:1064:0:0:0,-8.72987,-10 0/0:53.8524:16:16:558:0:0:0,-4.81648,-10 0/0:74.9245:23:23:860:0:0:0,-6.92369,-10 0/0:71.9142:22:22:790:0:0:0,-6.62266,-10 0/1:0.229707:2:0:0:2:76:-7.22,-0.60206,0 0/0:41.8112:12:12:425:0:0:0,-3.61236,-10 0/0:50.8421:15:15:559:0:0:0,-4.51545,-10 0/0:20.7391:5:5:190:0:0:0,-1.50515,-10 0/0:65.8936:20:20:741:0:0:0,-6.0206,-10 0/0:47.8318:14:14:493:0:0:0,-4.21442,-10 0/0:38.8009:11:11:403:0:0:0,-3.31133,-10 scaffold_6 8570913 . C T 1194 . AB=0.576271;ABP=5.99147;AC=4;AF=0.0217391;AN=184;AO=51;CIGAR=1X;DP=1301;DPB=1301;DPRA=1.94821;EPP=4.07475;EPPR=5.78978;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.96;NS=92;NUMALT=1;ODDS=0.411348;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1791;QR=45695;RO=1250;RPP=105.24;RPPR=2529.62;RUN=1;SAF=24;SAP=3.3935;SAR=27;SRF=627;SRP=3.03809;SRR=623;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:21.5557:6:6:228:0:0:0,-1.80618,-10 0/0:18.5454:5:5:190:0:0:0,-1.50515,-10 0/0:36.6072:11:11:414:0:0:0,-3.31133,-10 0/0:27.5763:8:8:280:0:0:0,-2.40824,-10 0/0:33.5969:10:10:379:0:0:0,-3.0103,-10 0/0:30.5866:9:9:311:0:0:0,-2.70927,-10 0/0:66.8265:30:29:1020:1:16:0,-5.95378,-10 0/0:75.7411:24:24:904:0:0:0,-7.22472,-10 0/0:24.566:7:7:265:0:0:0,-2.10721,-10 0/0:9.51447:2:2:76:0:0:0,-0.60206,-7.22 0/0:27.5763:8:8:282:0:0:0,-2.40824,-10 0/0:18.5454:5:5:183:0:0:0,-1.50515,-10 0/1:99:28:12:367:16:587:-10,0,-10 0/0:87.7821:28:28:1022:0:0:0,-8.42884,-10 0/0:81.7616:26:26:987:0:0:0,-7.82678,-10 0/0:48.6484:15:15:557:0:0:0,-4.51545,-10 0/0:39.6175:12:12:453:0:0:0,-3.61236,-10 0/0:24.566:7:7:264:0:0:0,-2.10721,-10 0/0:33.5969:10:10:322:0:0:0,-3.0103,-10 0/0:90.7927:29:29:1084:0:0:0,-8.72987,-10 0/0:36.6072:11:11:391:0:0:0,-3.31133,-10 0/0:63.6999:20:20:759:0:0:0,-6.0206,-10 0/0:33.5969:10:10:372:0:0:0,-3.0103,-10 0/0:45.6381:14:14:523:0:0:0,-4.21442,-10 0/0:36.6072:11:11:393:0:0:0,-3.31133,-10 0/0:45.6381:14:14:532:0:0:0,-4.21442,-10 0/0:45.6381:14:14:493:0:0:0,-4.21442,-10 0/0:24.566:7:7:255:0:0:0,-2.10721,-10 0/0:51.6587:16:16:608:0:0:0,-4.81648,-10 0/0:66.7102:21:21:763:0:0:0,-6.32163,-10 0/0:18.5454:5:5:181:0:0:0,-1.50515,-10 0/0:21.5557:6:6:218:0:0:0,-1.80618,-10 0/0:33.5969:10:10:357:0:0:0,-3.0103,-10 0/0:27.5763:8:8:291:0:0:0,-2.40824,-10 0/0:63.6999:20:20:752:0:0:0,-6.0206,-10 0/0:18.5454:5:5:177:0:0:0,-1.50515,-10 0/0:27.5763:8:8:288:0:0:0,-2.40824,-10 0/0:69.7205:22:22:833:0:0:0,-6.62266,-10 0/0:51.6587:16:16:605:0:0:0,-4.81648,-10 0/0:39.6175:12:12:449:0:0:0,-3.61236,-10 0/0:84.7719:27:27:1012:0:0:0,-8.12781,-10 0/0:45.6381:14:14:526:0:0:0,-4.21442,-10 1/1:15.7669:15:0:0:15:514:-10,-4.51545,0 0/0:63.6999:20:20:757:0:0:0,-6.0206,-10 0/0:39.6175:12:12:449:0:0:0,-3.61236,-10 0/0:33.5969:10:10:373:0:0:0,-3.0103,-10 0/0:99:38:38:1369:0:0:0,-10,-10 0/0:63.6999:20:20:757:0:0:0,-6.0206,-10 0/0:21.5557:6:6:220:0:0:0,-1.80618,-10 0/0:60.6896:19:19:707:0:0:0,-5.71957,-10 0/0:15.5351:4:4:152:0:0:0,-1.20412,-10 0/0:84.7719:27:27:969:0:0:0,-8.12781,-10 0/0:45.6381:14:14:500:0:0:0,-4.21442,-10 0/0:18.5454:5:5:190:0:0:0,-1.50515,-10 0/0:84.7719:27:27:1021:0:0:0,-8.12781,-10 0/0:30.5866:9:9:317:0:0:0,-2.70927,-10 0/0:54.669:17:17:577:0:0:0,-5.11751,-10 0/0:21.5557:6:6:226:0:0:0,-1.80618,-10 0/0:63.6999:20:20:733:0:0:0,-6.0206,-10 0/0:27.5763:8:8:303:0:0:0,-2.40824,-10 0/0:57.6793:18:18:669:0:0:0,-5.41854,-10 0/0:27.5763:8:8:299:0:0:0,-2.40824,-10 0/0:87.7821:28:28:1003:0:0:0,-8.42884,-10 0/0:57.6793:18:18:653:0:0:0,-5.41854,-10 0/0:30.5866:9:9:319:0:0:0,-2.70927,-10 0/1:99:31:13:471:18:636:-10,0,-10 0/0:51.6587:16:16:552:0:0:0,-4.81648,-10 0/0:30.5866:9:9:342:0:0:0,-2.70927,-10 0/0:78.7513:25:25:893:0:0:0,-7.52575,-10 0/0:39.6175:12:12:438:0:0:0,-3.61236,-10 0/0:57.6793:18:18:645:0:0:0,-5.41854,-10 0/0:81.7616:26:26:946:0:0:0,-7.82678,-10 0/0:78.7513:25:25:899:0:0:0,-7.52575,-10 0/0:42.6278:13:13:492:0:0:0,-3.91339,-10 0/0:51.6587:16:16:564:0:0:0,-4.81648,-10 0/0:33.5969:10:10:367:0:0:0,-3.0103,-10 0/0:33.5969:10:10:379:0:0:0,-3.0103,-10 0/0:24.566:7:7:234:0:0:0,-2.10721,-10 0/0:9.51447:2:2:74:0:0:0,-0.60206,-7.03 0/0:18.5454:5:5:168:0:0:0,-1.50515,-10 0/0:20.1177:27:26:930:1:38:0,-2.89645,-10 0/0:48.6484:15:15:521:0:0:0,-4.51545,-10 0/0:57.6793:18:18:681:0:0:0,-5.41854,-10 0/0:36.6072:11:11:411:0:0:0,-3.31133,-10 0/0:42.6278:13:13:448:0:0:0,-3.91339,-10 0/0:6.50417:1:1:38:0:0:0,-0.30103,-3.8 0/0:30.5866:9:9:311:0:0:0,-2.70927,-10 0/0:36.6072:11:11:416:0:0:0,-3.31133,-10 0/0:24.566:7:7:259:0:0:0,-2.10721,-10 0/0:51.6587:16:16:600:0:0:0,-4.81648,-10 0/0:36.6072:11:11:392:0:0:0,-3.31133,-10 0/0:27.5763:8:8:295:0:0:0,-2.40824,-10 scaffold_6 8570926 . A C 1086.72 . AB=0.518072;ABP=3.24576;AC=5;AF=0.0271739;AN=184;AO=44;CIGAR=1X;DP=1301;DPB=1301;DPRA=1.25836;EPP=3.79993;EPPR=3.63393;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9602;NS=92;NUMALT=1;ODDS=4.21751;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1602;QR=46408;RO=1257;RPP=98.5551;RPPR=2603.82;RUN=1;SAF=24;SAP=3.79993;SAR=20;SRF=623;SRP=3.21933;SRR=634;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:33.5375:6:6:221:0:0:0,-1.80618,-10 0/0:30.5272:5:5:190:0:0:0,-1.50515,-10 0/0:48.589:11:11:414:0:0:0,-3.31133,-10 0/0:39.5581:8:8:284:0:0:0,-2.40824,-10 0/0:45.5787:10:10:380:0:0:0,-3.0103,-10 0/0:42.5684:9:9:342:0:0:0,-2.70927,-10 0/1:99:30:14:454:16:569:-10,0,-10 0/1:99:24:15:559:9:339:-10,0,-10 0/0:36.5478:7:7:264:0:0:0,-2.10721,-10 0/0:21.4963:2:2:76:0:0:0,-0.60206,-7.22 0/0:39.5581:8:8:304:0:0:0,-2.40824,-10 0/0:30.5272:5:5:180:0:0:0,-1.50515,-10 0/0:99:28:28:996:0:0:0,-8.42884,-10 0/0:99:28:28:1033:0:0:0,-8.42884,-10 0/0:93.7436:26:26:983:0:0:0,-7.82678,-10 0/0:60.6302:15:15:556:0:0:0,-4.51545,-10 0/0:51.5993:12:12:455:0:0:0,-3.61236,-10 0/1:0.00232062:7:0:0:7:266:-10,-2.10721,0 0/0:45.5787:10:10:372:0:0:0,-3.0103,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:48.589:11:11:412:0:0:0,-3.31133,-10 0/0:78.692:21:21:797:0:0:0,-6.32163,-10 0/0:45.5787:10:10:375:0:0:0,-3.0103,-10 0/0:57.6199:14:14:528:0:0:0,-4.21442,-10 0/0:48.589:11:11:395:0:0:0,-3.31133,-10 0/0:57.6199:14:14:515:0:0:0,-4.21442,-10 0/0:51.5993:12:12:452:0:0:0,-3.61236,-10 0/0:36.5478:7:7:265:0:0:0,-2.10721,-10 0/0:63.6405:16:16:606:0:0:0,-4.81648,-10 0/0:54.6189:22:21:775:1:16:0,-3.68024,-10 0/0:30.5272:5:5:167:0:0:0,-1.50515,-10 0/0:33.5375:6:6:206:0:0:0,-1.80618,-10 0/0:45.5787:10:10:375:0:0:0,-3.0103,-10 0/0:39.5581:8:8:291:0:0:0,-2.40824,-10 0/0:75.6817:20:20:746:0:0:0,-6.0206,-10 0/0:30.5272:5:5:190:0:0:0,-1.50515,-10 0/0:39.5581:8:8:304:0:0:0,-2.40824,-10 0/0:78.692:21:21:793:0:0:0,-6.32163,-10 0/0:63.6405:16:16:605:0:0:0,-4.81648,-10 0/0:51.5993:12:12:452:0:0:0,-3.61236,-10 0/0:96.7516:27:27:1018:0:0:0,-8.12781,-10 0/0:60.6302:15:15:554:0:0:0,-4.51545,-10 0/0:60.6302:15:15:524:0:0:0,-4.51545,-10 0/0:75.6817:20:20:753:0:0:0,-6.0206,-10 0/0:51.5993:12:12:429:0:0:0,-3.61236,-10 0/0:45.5787:10:10:363:0:0:0,-3.0103,-10 0/0:99:38:38:1404:0:0:0,-10,-10 0/0:75.6817:20:20:745:0:0:0,-6.0206,-10 0/0:33.5375:6:6:221:0:0:0,-1.80618,-10 0/0:69.6611:18:18:662:0:0:0,-5.41854,-10 0/1:0.00029001:4:0:0:4:152:-10,-1.20412,0 0/0:96.7516:27:27:1004:0:0:0,-8.12781,-10 0/0:57.6199:14:14:494:0:0:0,-4.21442,-10 0/0:30.5272:5:5:181:0:0:0,-1.50515,-10 0/0:96.7516:27:27:997:0:0:0,-8.12781,-10 0/0:42.5684:9:9:328:0:0:0,-2.70927,-10 0/0:66.6508:17:17:628:0:0:0,-5.11751,-10 0/0:33.5375:6:6:201:0:0:0,-1.80618,-10 0/0:75.6817:20:20:734:0:0:0,-6.0206,-10 0/0:39.5581:8:8:298:0:0:0,-2.40824,-10 0/1:99:18:11:410:7:260:-10,0,-10 0/0:39.5581:8:8:293:0:0:0,-2.40824,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:69.6611:18:18:678:0:0:0,-5.41854,-10 0/0:42.5684:9:9:329:0:0:0,-2.70927,-10 0/0:99:31:31:1102:0:0:0,-9.33193,-10 0/0:63.6405:16:16:567:0:0:0,-4.81648,-10 0/0:42.5684:9:9:336:0:0:0,-2.70927,-10 0/0:90.7332:25:25:922:0:0:0,-7.52575,-10 0/0:51.5993:12:12:445:0:0:0,-3.61236,-10 0/0:69.6611:18:18:680:0:0:0,-5.41854,-10 0/0:96.7516:27:27:971:0:0:0,-8.12781,-10 0/0:90.7332:25:25:940:0:0:0,-7.52575,-10 0/0:54.6096:13:13:494:0:0:0,-3.91339,-10 0/0:63.6405:16:16:591:0:0:0,-4.81648,-10 0/0:45.5787:10:10:380:0:0:0,-3.0103,-10 0/0:45.5787:10:10:379:0:0:0,-3.0103,-10 0/0:36.5478:7:7:242:0:0:0,-2.10721,-10 0/0:21.4963:2:2:76:0:0:0,-0.60206,-7.22 0/0:30.5272:5:5:190:0:0:0,-1.50515,-10 0/0:96.7516:27:27:985:0:0:0,-8.12781,-10 0/0:60.6302:15:15:556:0:0:0,-4.51545,-10 0/0:69.6611:18:18:684:0:0:0,-5.41854,-10 0/0:48.589:11:11:418:0:0:0,-3.31133,-10 0/0:54.6096:13:13:466:0:0:0,-3.91339,-10 0/0:18.486:1:1:38:0:0:0,-0.30103,-3.8 0/0:42.5684:9:9:320:0:0:0,-2.70927,-10 0/0:48.589:11:11:418:0:0:0,-3.31133,-10 0/0:36.5478:7:7:266:0:0:0,-2.10721,-10 0/0:63.6405:16:16:606:0:0:0,-4.81648,-10 0/0:48.589:11:11:399:0:0:0,-3.31133,-10 0/0:39.5581:8:8:290:0:0:0,-2.40824,-10 scaffold_6 8631721 . G A 911.096 . AB=0.606557;ABP=9.02635;AC=4;AF=0.021978;AN=182;AO=37;CIGAR=1X;DP=1219;DPB=1219;DPRA=1.14573;EPP=83.3548;EPPR=2541.53;GTI=0;LEN=1;MEANALT=1;MQM=59.9189;MQMR=59.7053;NS=91;NUMALT=1;ODDS=3.61883;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1333;QR=43018;RO=1181;RPP=5.88603;RPPR=3.01214;RUN=1;SAF=22;SAP=5.88603;SAR=15;SRF=588;SRP=3.05627;SRR=593;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:34.1195:7:7:229:0:0:0,-2.10721,-10 0/0:31.1092:6:6:215:0:0:0,-1.80618,-10 0/0:76.2637:21:21:750:0:0:0,-6.32163,-10 0/0:46.1607:11:11:418:0:0:0,-3.31133,-10 0/0:40.1401:9:9:320:0:0:0,-2.70927,-10 0/0:25.0886:4:4:150:0:0:0,-1.20412,-10 0/0:88.3049:25:25:897:0:0:0,-7.52575,-10 0/1:99:23:8:280:15:539:-10,0,-10 0/0:52.1813:13:13:491:0:0:0,-3.91339,-10 .:.:.:.:.:.:.:. 0/0:22.0783:3:3:113:0:0:0,-0.90309,-10 0/0:34.1195:7:7:231:0:0:0,-2.10721,-10 0/0:88.3049:25:25:915:0:0:0,-7.52575,-10 0/0:91.3153:26:26:942:0:0:0,-7.82678,-10 0/1:99:9:3:114:6:225:-10,0,-9.85501 0/0:52.1813:13:13:471:0:0:0,-3.91339,-10 0/0:52.1813:13:13:493:0:0:0,-3.91339,-10 0/0:25.0886:4:4:152:0:0:0,-1.20412,-10 0/0:61.2122:16:16:569:0:0:0,-4.81648,-10 0/0:97.3332:28:28:1013:0:0:0,-8.42884,-10 0/0:37.1298:8:8:298:0:0:0,-2.40824,-10 0/0:85.2945:24:24:818:0:0:0,-7.22472,-10 0/0:28.0989:5:5:184:0:0:0,-1.50515,-10 0/0:70.2431:19:19:690:0:0:0,-5.71957,-10 0/0:55.1916:14:14:503:0:0:0,-4.21442,-10 0/1:88.5395:10:6:224:4:130:-10,0,-10 0/0:31.1092:6:6:225:0:0:0,-1.80618,-10 0/0:58.2019:15:15:564:0:0:0,-4.51545,-10 0/0:64.2225:17:17:612:0:0:0,-5.11751,-10 0/0:88.3049:25:25:913:0:0:0,-7.52575,-10 0/0:22.0783:3:3:110:0:0:0,-0.90309,-10 0/0:37.1298:8:8:303:0:0:0,-2.40824,-10 0/0:46.1607:11:11:409:0:0:0,-3.31133,-10 0/0:34.1195:7:7:263:0:0:0,-2.10721,-10 0/0:34.1195:7:7:265:0:0:0,-2.10721,-10 0/0:22.0783:3:3:91:0:0:0,-0.90309,-8.49333 0/0:40.1401:9:9:335:0:0:0,-2.70927,-10 0/0:52.1813:13:13:490:0:0:0,-3.91339,-10 0/0:52.1813:13:13:466:0:0:0,-3.91339,-10 0/0:43.1504:10:10:369:0:0:0,-3.0103,-10 0/0:67.2328:18:18:627:0:0:0,-5.41854,-10 0/0:61.2122:16:16:569:0:0:0,-4.81648,-10 0/0:40.1401:9:9:342:0:0:0,-2.70927,-10 0/0:61.2122:16:16:595:0:0:0,-4.81648,-10 0/1:99:19:7:266:12:439:-10,0,-10 0/0:46.1607:11:11:407:0:0:0,-3.31133,-10 0/0:99:35:35:1246:0:0:0,-10,-10 0/0:67.2328:18:18:677:0:0:0,-5.41854,-10 0/0:40.1401:9:9:342:0:0:0,-2.70927,-10 0/0:99:29:29:1048:0:0:0,-8.72987,-10 0/0:28.0989:5:5:190:0:0:0,-1.50515,-10 0/0:94.3256:27:27:951:0:0:0,-8.12781,-10 0/0:55.1916:14:14:505:0:0:0,-4.21442,-10 0/0:34.1195:7:7:252:0:0:0,-2.10721,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:37.1298:8:8:287:0:0:0,-2.40824,-10 0/0:64.2225:17:17:618:0:0:0,-5.11751,-10 0/0:28.0989:5:5:168:0:0:0,-1.50515,-10 0/0:49.171:12:12:438:0:0:0,-3.61236,-10 0/0:37.1298:8:8:281:0:0:0,-2.40824,-10 0/0:79.274:22:22:800:0:0:0,-6.62266,-10 0/0:58.2019:15:15:543:0:0:0,-4.51545,-10 0/0:82.2843:23:23:844:0:0:0,-6.92369,-10 0/0:49.171:12:12:451:0:0:0,-3.61236,-10 0/0:34.1195:7:7:266:0:0:0,-2.10721,-10 0/0:52.1813:13:13:480:0:0:0,-3.91339,-10 0/0:58.2019:15:15:540:0:0:0,-4.51545,-10 0/0:43.1504:10:10:354:0:0:0,-3.0103,-10 0/0:70.2431:19:19:690:0:0:0,-5.71957,-10 0/0:43.1504:10:10:371:0:0:0,-3.0103,-10 0/0:61.2122:16:16:605:0:0:0,-4.81648,-10 0/0:91.3153:26:26:945:0:0:0,-7.82678,-10 0/0:70.2431:19:19:692:0:0:0,-5.71957,-10 0/0:52.1813:13:13:491:0:0:0,-3.91339,-10 0/0:52.1813:13:13:430:0:0:0,-3.91339,-10 0/0:46.1607:11:11:413:0:0:0,-3.31133,-10 0/0:34.1195:8:7:266:0:0:0,-2.10721,-10 0/0:52.1813:13:13:484:0:0:0,-3.91339,-10 0/0:16.0577:1:1:37:0:0:0,-0.30103,-3.7 0/0:49.171:12:12:454:0:0:0,-3.61236,-10 0/0:73.2534:20:20:748:0:0:0,-6.0206,-10 0/0:79.274:22:22:800:0:0:0,-6.62266,-10 0/0:55.1916:14:14:519:0:0:0,-4.21442,-10 0/0:43.1504:10:10:360:0:0:0,-3.0103,-10 0/0:64.2225:17:17:627:0:0:0,-5.11751,-10 0/0:22.0783:3:3:114:0:0:0,-0.90309,-10 0/0:25.0886:4:4:150:0:0:0,-1.20412,-10 0/0:61.2122:16:16:604:0:0:0,-4.81648,-10 0/0:25.0886:4:4:149:0:0:0,-1.20412,-10 0/0:43.1504:10:10:345:0:0:0,-3.0103,-10 0/0:25.0886:4:4:152:0:0:0,-1.20412,-10 0/0:55.1916:14:14:479:0:0:0,-4.21442,-10 scaffold_6 8676209 . A G 1777.45 . AB=0;ABP=0;AC=10;AF=0.0543478;AN=184;AO=73;CIGAR=1X;DP=1244;DPB=1244;DPRA=1.08471;EPP=3.04005;EPPR=3.99294;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9589;NS=92;NUMALT=1;ODDS=5.77997;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2628;QR=42672;RO=1169;RPP=161.528;RPPR=2532.78;RUN=1;SAF=36;SAP=3.04005;SAR=37;SRF=574;SRP=3.82948;SRR=595;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:87.1651:7:7:248:0:0:0,-2.10721,-10 0/0:78.1343:4:4:128:0:0:0,-1.20412,-10 0/0:96.1968:10:10:377:0:0:0,-3.0103,-10 0/0:81.1446:5:5:189:0:0:0,-1.50515,-10 0/0:81.1446:5:5:168:0:0:0,-1.50515,-10 0/0:78.1343:4:4:152:0:0:0,-1.20412,-10 0/0:99:32:32:1195:0:0:0,-9.63296,-10 0/0:99:11:11:414:0:0:0,-3.31133,-10 0/0:99:15:15:555:0:0:0,-4.51545,-10 0/0:72.1136:2:2:76:0:0:0,-0.60206,-7.22 0/0:75.1241:4:3:113:0:0:0,-0.90309,-10 0/0:81.1446:5:5:188:0:0:0,-1.50515,-10 0/0:99:22:22:769:0:0:0,-6.62266,-10 0/0:99:30:30:1072:0:0:0,-9.0309,-10 0/0:99:16:16:597:0:0:0,-4.81648,-10 0/0:93.1852:9:9:337:0:0:0,-2.70927,-10 0/0:99:17:17:566:0:0:0,-5.11751,-10 0/0:87.1651:7:7:257:0:0:0,-2.10721,-10 0/0:99:13:13:494:0:0:0,-3.91339,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/0:99:15:15:493:0:0:0,-4.51545,-10 0/0:99:16:16:599:0:0:0,-4.81648,-10 0/0:68.9638:1:1:38:0:0:0,-0.30103,-3.8 0/0:90.1752:8:8:295:0:0:0,-2.40824,-10 0/0:99:15:15:534:0:0:0,-4.51545,-10 0/0:99:16:16:594:0:0:0,-4.81648,-10 0/0:99:12:12:420:0:0:0,-3.61236,-10 0/0:99:12:12:453:0:0:0,-3.61236,-10 0/0:99:14:14:509:0:0:0,-4.21442,-10 0/0:99:16:16:599:0:0:0,-4.81648,-10 0/0:81.1446:5:5:186:0:0:0,-1.50515,-10 0/0:81.1446:5:5:190:0:0:0,-1.50515,-10 0/0:99:16:16:580:0:0:0,-4.81648,-10 0/0:93.1852:9:9:337:0:0:0,-2.70927,-10 0/0:99:14:14:501:0:0:0,-4.21442,-10 0/0:96.1968:10:10:373:0:0:0,-3.0103,-10 0/0:96.1968:10:10:378:0:0:0,-3.0103,-10 0/0:99:22:22:824:0:0:0,-6.62266,-10 0/0:99:22:22:811:0:0:0,-6.62266,-10 0/0:96.1968:10:10:369:0:0:0,-3.0103,-10 0/0:99:20:20:723:0:0:0,-6.0206,-10 0/0:99:21:21:746:0:0:0,-6.32163,-10 0/0:87.1651:7:7:257:0:0:0,-2.10721,-10 0/0:99:21:21:770:0:0:0,-6.32163,-10 0/0:99:15:15:515:0:0:0,-4.51545,-10 0/0:96.1968:10:10:375:0:0:0,-3.0103,-10 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:99:19:19:700:0:0:0,-5.71957,-10 0/0:96.1968:10:10:300:0:0:0,-3.0103,-10 0/0:99:27:27:986:0:0:0,-8.12781,-10 0/0:96.1968:10:10:369:0:0:0,-3.0103,-10 0/0:99:23:23:850:0:0:0,-6.92369,-10 0/0:99:11:11:414:0:0:0,-3.31133,-10 0/0:81.1446:5:5:168:0:0:0,-1.50515,-10 0/0:99:28:28:1008:0:0:0,-8.42884,-10 0/0:90.1752:8:8:289:0:0:0,-2.40824,-10 0/0:99:14:14:507:0:0:0,-4.21442,-10 0/0:96.1968:10:10:380:0:0:0,-3.0103,-10 0/0:99:19:19:717:0:0:0,-5.71957,-10 0/0:84.1549:6:6:228:0:0:0,-1.80618,-10 0/0:99:20:20:733:0:0:0,-6.0206,-10 0/0:99:13:13:482:0:0:0,-3.91339,-10 0/0:99:29:29:1013:0:0:0,-8.72987,-10 0/0:99:18:18:655:0:0:0,-5.41854,-10 0/0:84.1549:6:6:227:0:0:0,-1.80618,-10 0/0:99:21:21:773:0:0:0,-6.32163,-10 0/0:99:13:13:477:0:0:0,-3.91339,-10 0/0:78.1343:4:4:151:0:0:0,-1.20412,-10 0/0:99:24:24:873:0:0:0,-7.22472,-10 0/0:87.1651:7:7:242:0:0:0,-2.10721,-10 1/1:67.2598:19:0:0:19:687:-10,-5.71957,0 1/1:70.2701:20:0:0:20:746:-10,-6.0206,0 1/1:49.198:13:0:0:13:475:-10,-3.91339,0 1/1:25.1156:5:0:0:5:176:-10,-1.50515,0 1/1:58.2289:16:0:0:16:544:-10,-4.81648,0 0/0:96.1968:10:10:362:0:0:0,-3.0103,-10 0/0:99:13:13:490:0:0:0,-3.91339,-10 0/0:78.1343:4:4:152:0:0:0,-1.20412,-10 0/0:75.1241:3:3:114:0:0:0,-0.90309,-10 0/0:84.1549:6:6:220:0:0:0,-1.80618,-10 0/0:99:29:29:1033:0:0:0,-8.72987,-10 0/0:99:21:21:795:0:0:0,-6.32163,-10 0/0:99:16:16:603:0:0:0,-4.81648,-10 0/0:99:23:22:823:0:0:0,-6.62266,-10 0/0:99:18:18:659:0:0:0,-5.41854,-10 0/0:61.4665:1:1:16:0:0:0,-0.30103,-1.6 0/0:93.1852:9:9:340:0:0:0,-2.70927,-10 0/0:78.1343:4:4:152:0:0:0,-1.20412,-10 0/0:90.1752:8:8:298:0:0:0,-2.40824,-10 0/0:99:11:11:392:0:0:0,-3.31133,-10 0/0:99:14:14:527:0:0:0,-4.21442,-10 0/0:99:11:11:415:0:0:0,-3.31133,-10 scaffold_6 8780064 . C A 262.754 . AB=0.478261;ABP=3.10471;AC=1;AF=0.00543478;AN=184;AO=12;CIGAR=1X;DP=1800;DPB=1800;DPRA=0.996593;EPP=5.9056;EPPR=4.76596;GTI=0;LEN=1;MEANALT=1;MQM=29.5833;MQMR=47.4541;NS=92;NUMALT=1;ODDS=8.76297;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=424;QR=65015;RO=1786;RPP=29.068;RPPR=3881.26;RUN=1;SAF=4;SAP=5.9056;SAR=8;SRF=912;SRP=4.76596;SRR=874;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.1821:13:13:484:0:0:0,-3.91339,-10 0/0:68.1615:11:11:394:0:0:0,-3.31133,-10 0/0:89.2332:18:18:679:0:0:0,-5.41854,-10 0/0:68.1615:11:11:412:0:0:0,-3.31133,-10 0/0:47.0894:4:4:152:0:0:0,-1.20412,-10 0/0:53.11:6:6:228:0:0:0,-1.80618,-10 0/0:99:33:33:1232:0:0:0,-9.93399,-10 0/0:99:35:35:1247:0:0:0,-10,-10 0/0:99:23:23:787:0:0:0,-6.92369,-10 0/0:47.0894:4:4:152:0:0:0,-1.20412,-10 0/0:47.0894:4:4:129:0:0:0,-1.20412,-10 0/0:74.1821:13:13:444:0:0:0,-3.91339,-10 0/0:99:40:40:1396:0:0:0,-10,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:99:22:22:800:0:0:0,-6.62266,-10 0/0:99:26:26:945:0:0:0,-7.82678,-10 0/0:71.1718:12:12:440:0:0:0,-3.61236,-10 0/0:65.1512:10:10:371:0:0:0,-3.0103,-10 0/0:99:22:22:830:0:0:0,-6.62266,-10 0/0:99:43:43:1581:0:0:0,-10,-10 0/0:77.1924:14:14:493:0:0:0,-4.21442,-10 0/0:99:41:41:1509:0:0:0,-10,-10 0/0:53.11:6:6:213:0:0:0,-1.80618,-10 0/0:74.1821:13:13:468:0:0:0,-3.91339,-10 0/0:99:22:22:788:0:0:0,-6.62266,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:80.2026:15:15:559:0:0:0,-4.51545,-10 0/0:86.2231:17:17:587:0:0:0,-5.11751,-10 0/0:99:29:29:1017:0:0:0,-8.72987,-10 0/0:38.0585:1:1:38:0:0:0,-0.30103,-3.8 0/0:53.11:6:6:218:0:0:0,-1.80618,-10 0/0:86.2231:17:17:618:0:0:0,-5.11751,-10 0/0:83.2129:16:16:601:0:0:0,-4.81648,-10 0/0:86.2231:17:17:616:0:0:0,-5.11751,-10 0/0:44.0791:3:3:114:0:0:0,-0.90309,-10 0/0:53.11:6:6:216:0:0:0,-1.80618,-10 0/0:99:25:25:926:0:0:0,-7.52575,-10 0/0:89.2332:18:18:657:0:0:0,-5.41854,-10 0/0:80.2026:15:15:518:0:0:0,-4.51545,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:89.2332:18:18:639:0:0:0,-5.41854,-10 0/0:86.2231:18:17:637:0:0:0,-5.11751,-10 0/0:99:42:42:1521:0:0:0,-10,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:83.2129:16:16:596:0:0:0,-4.81648,-10 0/0:99:48:48:1742:0:0:0,-10,-10 0/0:95.2526:20:20:755:0:0:0,-6.0206,-10 0/0:83.2129:16:16:561:0:0:0,-4.81648,-10 0/0:99:48:48:1733:0:0:0,-10,-10 0/0:59.1306:8:8:304:0:0:0,-2.40824,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:59.5627:16:15:553:1:15:0,-2.11236,-10 0/0:47.0894:4:4:152:0:0:0,-1.20412,-10 0/0:99:39:39:1416:0:0:0,-10,-10 0/0:71.1718:12:12:449:0:0:0,-3.61236,-10 0/0:99:22:22:815:0:0:0,-6.62266,-10 0/0:50.0997:5:5:166:0:0:0,-1.50515,-10 0/0:83.2129:16:16:554:0:0:0,-4.81648,-10 0/0:74.1821:13:13:448:0:0:0,-3.91339,-10 0/0:99:45:45:1597:0:0:0,-10,-10 0/0:98.2612:21:21:792:0:0:0,-6.32163,-10 0/0:99:54:54:1964:0:0:0,-10,-10 0/0:86.2231:17:17:618:0:0:0,-5.11751,-10 0/0:86.2231:17:17:637:0:0:0,-5.11751,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:80.2026:15:15:570:0:0:0,-4.51545,-10 0/0:74.1821:13:13:487:0:0:0,-3.91339,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:59.1306:8:8:278:0:0:0,-2.40824,-10 0/0:98.2612:21:21:720:0:0:0,-6.32163,-10 0/1:99:23:12:451:11:409:-10,0,-10 0/0:80.2026:15:15:562:0:0:0,-4.51545,-10 0/0:98.2612:21:21:773:0:0:0,-6.32163,-10 0/0:99:31:31:1168:0:0:0,-9.33193,-10 0/0:68.1615:11:11:395:0:0:0,-3.31133,-10 0/0:74.1821:13:13:470:0:0:0,-3.91339,-10 0/0:53.11:6:6:227:0:0:0,-1.80618,-10 0/0:62.1409:9:9:334:0:0:0,-2.70927,-10 0/0:65.1512:10:10:355:0:0:0,-3.0103,-10 0/0:95.2526:20:20:682:0:0:0,-6.0206,-10 0/0:99:26:26:921:0:0:0,-7.82678,-10 0/0:92.2431:19:19:689:0:0:0,-5.71957,-10 0/0:99:25:24:905:0:0:0,-7.22472,-10 0/0:99:28:28:1016:0:0:0,-8.42884,-10 0/0:65.1512:10:10:348:0:0:0,-3.0103,-10 0/0:77.1924:14:14:495:0:0:0,-4.21442,-10 0/0:71.1718:12:12:440:0:0:0,-3.61236,-10 0/0:50.0997:5:5:190:0:0:0,-1.50515,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:86.2231:17:17:642:0:0:0,-5.11751,-10 0/0:95.2526:20:20:736:0:0:0,-6.0206,-10 scaffold_6 8843028 . T C 300.789 . AB=0.5;ABP=3.0103;AC=1;AF=0.00549451;AN=182;AO=12;CIGAR=1X;DP=1735;DPB=1735;DPRA=1.26242;EPP=3.73412;EPPR=5.91568;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9506;NS=91;NUMALT=1;ODDS=9.19905;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=454;QR=61683;RO=1722;RPP=29.068;RPPR=3647.35;RUN=1;SAF=5;SAP=3.73412;SAR=7;SRF=832;SRP=7.25236;SRR=890;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:67.0449:12:12:425:0:0:0,-3.61236,-10 0/0:45.9728:5:5:187:0:0:0,-1.50515,-10 0/0:76.0757:15:15:557:0:0:0,-4.51545,-10 0/0:76.0757:15:15:518:0:0:0,-4.51545,-10 0/0:61.0243:10:10:355:0:0:0,-3.0103,-10 0/0:79.086:16:16:556:0:0:0,-4.81648,-10 0/0:99:37:37:1305:0:0:0,-10,-10 0/0:91.1267:20:20:729:0:0:0,-6.0206,-10 0/0:55.0037:8:8:283:0:0:0,-2.40824,-10 0/0:51.9934:7:7:244:0:0:0,-2.10721,-10 0/0:58.014:9:9:342:0:0:0,-2.70927,-10 0/0:55.0037:8:8:292:0:0:0,-2.40824,-10 0/0:99:24:24:837:0:0:0,-7.22472,-10 0/0:99:38:38:1371:0:0:0,-10,-10 0/0:99:35:35:1320:0:0:0,-10,-10 0/0:99:26:26:935:0:0:0,-7.82678,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:55.0037:8:8:294:0:0:0,-2.40824,-10 0/0:85.1065:18:18:646:0:0:0,-5.41854,-10 0/0:99:33:33:1140:0:0:0,-9.93399,-10 0/0:58.014:9:9:328:0:0:0,-2.70927,-10 0/0:99:24:24:891:0:0:0,-7.22472,-10 0/0:61.0243:10:10:348:0:0:0,-3.0103,-10 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:76.0757:15:15:534:0:0:0,-4.51545,-10 0/0:99:23:23:852:0:0:0,-6.92369,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 0/0:64.0346:11:11:393:0:0:0,-3.31133,-10 0/0:99:27:27:938:0:0:0,-8.12781,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:45.9728:5:5:167:0:0:0,-1.50515,-10 0/0:76.0757:15:15:551:0:0:0,-4.51545,-10 0/0:85.1065:18:18:649:0:0:0,-5.41854,-10 0/0:88.1167:19:19:647:0:0:0,-5.71957,-10 0/0:73.0654:14:14:504:0:0:0,-4.21442,-10 0/0:55.0037:8:8:304:0:0:0,-2.40824,-10 0/0:64.0346:11:11:375:0:0:0,-3.31133,-10 0/0:99:23:23:810:0:0:0,-6.92369,-10 0/0:64.0346:12:11:413:0:0:0,-3.31133,-10 0/0:73.0654:14:14:514:0:0:0,-4.21442,-10 0/0:99:43:43:1477:0:0:0,-10,-10 0/0:88.1167:19:19:692:0:0:0,-5.71957,-10 0/0:76.0757:15:15:544:0:0:0,-4.51545,-10 0/0:99:29:29:1022:0:0:0,-8.72987,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:64.0346:11:11:417:0:0:0,-3.31133,-10 0/0:99:57:57:2036:0:0:0,-10,-10 0/0:88.1167:19:19:681:0:0:0,-5.71957,-10 0/0:70.0552:13:13:485:0:0:0,-3.91339,-10 0/0:99:27:27:932:0:0:0,-8.12781,-10 0/0:73.0654:14:14:471:0:0:0,-4.21442,-10 0/0:99:40:40:1391:0:0:0,-10,-10 0/0:73.0654:14:14:508:0:0:0,-4.21442,-10 0/0:51.9934:7:7:263:0:0:0,-2.10721,-10 0/0:99:31:31:1120:0:0:0,-9.33193,-10 0/0:82.0963:17:17:605:0:0:0,-5.11751,-10 0/0:88.1167:19:19:664:0:0:0,-5.71957,-10 0/0:45.9728:5:5:180:0:0:0,-1.50515,-10 0/0:79.086:16:16:578:0:0:0,-4.81648,-10 0/0:61.0243:10:10:368:0:0:0,-3.0103,-10 0/1:99:24:12:456:12:454:-10,0,-10 0/0:79.086:16:16:597:0:0:0,-4.81648,-10 0/0:99:34:34:1198:0:0:0,-10,-10 0/0:99:25:25:916:0:0:0,-7.52575,-10 0/0:76.0757:15:15:540:0:0:0,-4.51545,-10 0/0:99:26:26:911:0:0:0,-7.82678,-10 0/0:88.1167:19:19:632:0:0:0,-5.71957,-10 0/0:64.0346:11:11:345:0:0:0,-3.31133,-10 0/0:99:24:24:839:0:0:0,-7.22472,-10 0/0:67.0449:12:12:455:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0/0:99:27:27:943:0:0:0,-8.12781,-10 0/0:99:23:23:855:0:0:0,-6.92369,-10 0/0:91.1267:20:20:746:0:0:0,-6.0206,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 0/0:94.1365:21:21:707:0:0:0,-6.32163,-10 0/0:70.0552:13:13:482:0:0:0,-3.91339,-10 0/0:79.086:16:16:574:0:0:0,-4.81648,-10 0/0:45.9728:5:5:189:0:0:0,-1.50515,-10 0/0:45.9728:5:5:187:0:0:0,-1.50515,-10 0/0:99:25:25:898:0:0:0,-7.52575,-10 0/0:99:24:24:856:0:0:0,-7.22472,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:99:26:26:911:0:0:0,-7.82678,-10 0/0:99:29:29:1071:0:0:0,-8.72987,-10 0/0:48.9831:6:6:212:0:0:0,-1.80618,-10 0/0:76.0757:15:15:543:0:0:0,-4.51545,-10 0/0:94.1365:21:21:764:0:0:0,-6.32163,-10 0/0:39.9522:3:3:105:0:0:0,-0.90309,-9.8 0/0:85.1065:18:18:637:0:0:0,-5.41854,-10 0/0:88.1167:19:19:653:0:0:0,-5.71957,-10 0/0:73.0654:14:14:486:0:0:0,-4.21442,-10 scaffold_6 8891422 . T C 2241.39 . AB=0.469565;ABP=3.93554;AC=5;AF=0.0271739;AN=184;AO=81;CIGAR=1X;DP=2234;DPB=2234;DPRA=1.47887;EPP=3.03711;EPPR=3.54433;GTI=0;LEN=1;MEANALT=1;MQM=59.8395;MQMR=59.7341;NS=92;NUMALT=1;ODDS=2.64397;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2928;QR=79367;RO=2151;RPP=116.275;RPPR=2610.04;RUN=1;SAF=41;SAP=3.03711;SAR=40;SRF=1075;SRP=3.01131;SRR=1076;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:63.1877:19:19:689:0:0:0,-5.71957,-10 0/0:18.0332:4:4:142:0:0:0,-1.20412,-10 0/0:99:36:36:1343:0:0:0,-10,-10 0/0:54.1568:16:16:580:0:0:0,-4.81648,-10 0/0:51.1465:15:15:545:0:0:0,-4.51545,-10 0/0:45.1259:13:13:476:0:0:0,-3.91339,-10 0/0:99:39:39:1460:0:0:0,-10,-10 0/0:75.2289:23:23:824:0:0:0,-6.92369,-10 0/0:39.1053:11:11:416:0:0:0,-3.31133,-10 0/0:12.0126:3:2:63:0:0:0,-0.60206,-5.62667 0/0:33.0847:9:9:320:0:0:0,-2.70927,-10 0/0:27.0641:7:7:266:0:0:0,-2.10721,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:99:44:44:1605:0:0:0,-10,-10 0/0:99:47:47:1745:0:0:0,-10,-10 0/0:90.28:28:28:1027:0:0:0,-8.42884,-10 0/1:99:29:11:387:18:663:-10,0,-10 0/0:33.0847:9:9:342:0:0:0,-2.70927,-10 0/0:99:46:46:1712:0:0:0,-10,-10 0/0:99:43:43:1561:0:0:0,-10,-10 0/0:69.2082:21:21:745:0:0:0,-6.32163,-10 0/0:99:36:36:1339:0:0:0,-10,-10 0/0:51.1465:15:15:566:0:0:0,-4.51545,-10 0/0:60.1774:18:18:672:0:0:0,-5.41854,-10 0/0:75.2289:23:23:847:0:0:0,-6.92369,-10 0/0:87.2699:27:27:997:0:0:0,-8.12781,-10 0/0:66.198:20:20:732:0:0:0,-6.0206,-10 0/0:63.1877:19:19:669:0:0:0,-5.71957,-10 0/0:93.2899:29:29:1061:0:0:0,-8.72987,-10 0/0:99:46:46:1617:0:0:0,-10,-10 0/0:18.0332:4:4:150:0:0:0,-1.20412,-10 0/0:39.1053:11:11:418:0:0:0,-3.31133,-10 0/0:96.2995:30:30:1111:0:0:0,-9.0309,-10 0/0:48.1362:14:14:520:0:0:0,-4.21442,-10 0/0:81.2494:25:25:925:0:0:0,-7.52575,-10 0/0:30.0744:8:8:302:0:0:0,-2.40824,-10 0/0:69.2082:21:21:772:0:0:0,-6.32163,-10 0/0:81.2494:25:25:935:0:0:0,-7.52575,-10 0/0:99:38:38:1432:0:0:0,-10,-10 0/0:72.2185:22:22:814:0:0:0,-6.62266,-10 0/0:81.2494:25:25:946:0:0:0,-7.52575,-10 0/0:72.2185:22:22:803:0:0:0,-6.62266,-10 0/0:63.1877:19:19:682:0:0:0,-5.71957,-10 0/0:99:39:39:1455:0:0:0,-10,-10 0/0:99:47:47:1761:0:0:0,-10,-10 0/0:63.1877:19:19:700:0:0:0,-5.71957,-10 0/0:99:52:52:1913:0:0:0,-10,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:39.1053:11:11:410:0:0:0,-3.31133,-10 0/0:99:46:46:1712:0:0:0,-10,-10 0/0:42.1156:12:12:454:0:0:0,-3.61236,-10 0/1:99:47:31:1120:16:573:-10,0,-10 0/0:72.2185:22:22:808:0:0:0,-6.62266,-10 0/0:27.0641:7:7:266:0:0:0,-2.10721,-10 0/0:99:53:53:1993:0:0:0,-10,-10 0/0:66.198:20:20:727:0:0:0,-6.0206,-10 0/0:75.2289:23:23:835:0:0:0,-6.92369,-10 0/0:30.0744:8:8:292:0:0:0,-2.40824,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:69.2082:21:21:784:0:0:0,-6.32163,-10 0/0:75.2289:23:23:874:0:0:0,-6.92369,-10 0/0:69.2082:21:21:791:0:0:0,-6.32163,-10 0/0:99:50:50:1871:0:0:0,-10,-10 0/0:69.2082:21:21:743:0:0:0,-6.32163,-10 0/0:60.1774:18:18:681:0:0:0,-5.41854,-10 0/0:81.9427:34:33:1166:1:14:0,-7.30354,-10 0/0:69.2082:21:21:794:0:0:0,-6.32163,-10 0/0:48.1362:14:14:512:0:0:0,-4.21442,-10 0/0:99:52:52:1923:0:0:0,-10,-10 0/0:36.095:10:10:366:0:0:0,-3.0103,-10 0/0:87.2699:27:27:995:0:0:0,-8.12781,-10 0/0:96.2995:30:30:1106:0:0:0,-9.0309,-10 0/0:99:37:37:1357:0:0:0,-10,-10 1/1:43.9518:26:0:0:26:933:-10,-7.82678,0 0/1:99:39:19:707:20:745:-10,0,-10 0/0:60.1774:18:18:683:0:0:0,-5.41854,-10 0/0:57.1671:17:17:636:0:0:0,-5.11751,-10 0/0:45.1259:13:13:486:0:0:0,-3.91339,-10 0/0:30.0744:8:8:282:0:0:0,-2.40824,-10 0/0:63.1877:19:19:682:0:0:0,-5.71957,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:90.28:28:28:1035:0:0:0,-8.42884,-10 0/0:99:32:32:1179:0:0:0,-9.63296,-10 0/0:75.2289:23:23:863:0:0:0,-6.92369,-10 0/0:75.2289:23:23:858:0:0:0,-6.92369,-10 0/0:21.0435:5:5:189:0:0:0,-1.50515,-10 0/0:63.1877:20:19:676:0:0:0,-5.71957,-10 0/0:66.198:20:20:753:0:0:0,-6.0206,-10 0/0:24.0538:6:6:228:0:0:0,-1.80618,-10 0/0:69.2082:21:21:787:0:0:0,-6.32163,-10 0/0:57.1671:17:17:619:0:0:0,-5.11751,-10 0/0:66.198:20:20:752:0:0:0,-6.0206,-10 scaffold_6 8891632 . T C 2648.79 . AB=0.569231;ABP=5.71629;AC=6;AF=0.0326087;AN=184;AO=99;CIGAR=1X;DP=2625;DPB=2625;DPRA=1.11849;EPP=4.08507;EPPR=6.53701;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=3.2897;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3589;QR=92516;RO=2522;RPP=217.986;RPPR=5453.44;RUN=1;SAF=53;SAP=4.08507;SAR=46;SRF=1290;SRP=5.90674;SRR=1232;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.5991:16:16:595:0:0:0,-4.81648,-10 0/0:41.5579:12:12:436:0:0:0,-3.61236,-10 0/0:99:38:38:1348:0:0:0,-10,-10 0/0:56.6094:17:17:619:0:0:0,-5.11751,-10 0/0:59.6197:18:18:667:0:0:0,-5.41854,-10 0/0:47.5785:14:14:514:0:0:0,-4.21442,-10 0/0:99:43:43:1609:0:0:0,-10,-10 0/0:98.7519:31:31:1135:0:0:0,-9.33193,-10 0/0:59.6197:18:18:649:0:0:0,-5.41854,-10 0/0:14.4652:3:3:114:0:0:0,-0.90309,-10 0/0:50.5888:15:15:558:0:0:0,-4.51545,-10 0/0:41.5579:12:12:434:0:0:0,-3.61236,-10 0/0:99:50:50:1859:0:0:0,-10,-10 0/0:99:50:50:1835:0:0:0,-10,-10 0/0:99:49:49:1763:0:0:0,-10,-10 0/0:99:34:34:1226:0:0:0,-10,-10 0/0:99:36:36:1235:0:0:0,-10,-10 0/0:53.5991:16:16:608:0:0:0,-4.81648,-10 0/0:92.7326:29:29:1074:0:0:0,-8.72987,-10 0/0:99:50:50:1791:0:0:0,-10,-10 0/0:59.6197:18:18:673:0:0:0,-5.41854,-10 0/0:99:38:38:1430:0:0:0,-10,-10 0/0:44.5682:14:13:468:0:0:0,-3.91339,-10 0/0:80.6918:25:25:925:0:0:0,-7.52575,-10 0/0:68.6506:21:21:770:0:0:0,-6.32163,-10 0/0:99:36:36:1350:0:0:0,-10,-10 0/0:95.7424:30:30:1085:0:0:0,-9.0309,-10 0/0:59.6197:18:18:615:0:0:0,-5.41854,-10 0/0:98.7519:31:31:1149:0:0:0,-9.33193,-10 0/0:99:44:44:1538:0:0:0,-10,-10 0/0:32.527:9:9:337:0:0:0,-2.70927,-10 0/0:32.527:9:9:330:0:0:0,-2.70927,-10 0/0:74.6712:23:23:865:0:0:0,-6.92369,-10 0/0:56.6094:17:17:645:0:0:0,-5.11751,-10 0/0:98.7519:32:31:1068:0:0:0,-9.33193,-10 0/0:29.5167:8:8:299:0:0:0,-2.40824,-10 0/0:50.5888:15:15:547:0:0:0,-4.51545,-10 0/0:99:48:48:1734:0:0:0,-10,-10 0/0:86.7123:27:27:972:0:0:0,-8.12781,-10 0/0:92.7326:29:29:1089:0:0:0,-8.72987,-10 0/0:99:46:46:1708:0:0:0,-10,-10 0/0:74.6712:23:23:824:0:0:0,-6.92369,-10 0/0:77.6815:24:24:877:0:0:0,-7.22472,-10 0/0:99:37:37:1376:0:0:0,-10,-10 0/0:98.7519:31:31:1164:0:0:0,-9.33193,-10 0/0:68.6506:21:21:789:0:0:0,-6.32163,-10 0/0:99:58:58:2107:0:0:0,-10,-10 0/0:99:38:38:1439:0:0:0,-10,-10 0/0:89.7225:28:28:1028:0:0:0,-8.42884,-10 0/0:99:58:58:2114:0:0:0,-10,-10 0/0:86.7123:27:27:1012:0:0:0,-8.12781,-10 0/0:99:55:55:1982:0:0:0,-10,-10 0/0:86.7123:27:27:935:0:0:0,-8.12781,-10 0/0:32.527:9:9:326:0:0:0,-2.70927,-10 0/0:99:58:58:2123:0:0:0,-10,-10 0/0:71.6609:22:22:801:0:0:0,-6.62266,-10 0/0:74.6712:23:23:828:0:0:0,-6.92369,-10 0/0:59.6197:18:18:663:0:0:0,-5.41854,-10 0/0:98.7519:31:31:1119:0:0:0,-9.33193,-10 0/0:80.6918:25:25:906:0:0:0,-7.52575,-10 0/0:99:46:46:1703:0:0:0,-10,-10 0/0:77.6815:24:24:906:0:0:0,-7.22472,-10 0/0:99:62:62:2269:0:0:0,-10,-10 0/0:83.7021:26:26:968:0:0:0,-7.82678,-10 0/0:59.6197:18:18:682:0:0:0,-5.41854,-10 0/0:99:42:42:1567:0:0:0,-10,-10 0/0:99:37:37:1374:0:0:0,-10,-10 0/0:41.5579:12:12:444:0:0:0,-3.61236,-10 0/0:99:57:57:2113:0:0:0,-10,-10 0/0:74.6712:23:23:849:0:0:0,-6.92369,-10 0/0:65.6403:20:20:732:0:0:0,-6.0206,-10 0/0:98.7519:31:31:1161:0:0:0,-9.33193,-10 0/0:99:34:34:1229:0:0:0,-10,-10 0/0:62.63:19:19:687:0:0:0,-5.71957,-10 0/0:99:39:39:1441:0:0:0,-10,-10 0/0:59.6197:18:18:654:0:0:0,-5.41854,-10 1/1:37.9914:26:0:0:26:918:-10,-7.82678,0 0/0:68.6506:21:21:783:0:0:0,-6.32163,-10 0/0:44.5682:14:13:468:0:0:0,-3.91339,-10 0/0:71.6609:22:22:820:0:0:0,-6.62266,-10 0/0:99:52:51:1889:0:0:0,-10,-10 1/1:68.0944:36:0:0:36:1299:-10,-10,0 0/1:99:31:10:378:21:787:-10,0,-10 0/1:99:34:18:661:16:585:-10,0,-10 0/0:95.7424:30:30:1099:0:0:0,-9.0309,-10 0/0:44.5682:13:13:493:0:0:0,-3.91339,-10 0/0:77.6815:24:24:884:0:0:0,-7.22472,-10 0/0:65.6403:20:20:755:0:0:0,-6.0206,-10 0/0:29.5167:8:8:304:0:0:0,-2.40824,-10 0/0:83.7021:26:26:981:0:0:0,-7.82678,-10 0/0:99:36:36:1352:0:0:0,-10,-10 0/0:71.6609:22:22:791:0:0:0,-6.62266,-10 scaffold_6 8891634 . G A 3059.7 . AB=0.43617;ABP=9.66332;AC=8;AF=0.0434783;AN=184;AO=118;CIGAR=1X;DP=2625;DPB=2625;DPRA=1.19396;EPP=4.18805;EPPR=6.67276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=2.75503;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4156;QR=90672;RO=2505;RPP=259.244;RPPR=5416.52;RUN=1;SAF=63;SAP=4.18805;SAR=55;SRF=1282;SRP=6.02782;SRR=1223;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.5764:16:16:557:0:0:0,-4.81648,-10 0/0:46.5352:12:12:404:0:0:0,-3.61236,-10 0/0:99:38:38:1330:0:0:0,-10,-10 1/1:12.4455:17:0:0:17:624:-10,-5.11751,0 0/0:64.597:18:18:631:0:0:0,-5.41854,-10 0/0:52.5558:14:14:484:0:0:0,-4.21442,-10 0/0:99:43:43:1594:0:0:0,-10,-10 0/1:99:31:19:709:12:425:-10,0,-10 0/0:64.597:18:18:674:0:0:0,-5.41854,-10 0/0:19.4425:3:3:105:0:0:0,-0.90309,-9.8 0/0:55.5661:15:15:524:0:0:0,-4.51545,-10 0/0:21.7805:12:11:388:1:16:0,-0.933179,-10 0/0:99:50:50:1772:0:0:0,-10,-10 0/0:99:50:49:1767:0:0:0,-10,-10 0/0:99:49:49:1797:0:0:0,-10,-10 0/0:99:34:34:1270:0:0:0,-10,-10 0/0:99:36:36:1228:0:0:0,-10,-10 0/0:58.5764:16:16:599:0:0:0,-4.81648,-10 0/0:97.7065:29:29:1065:0:0:0,-8.72987,-10 0/0:99:50:50:1804:0:0:0,-10,-10 0/0:64.597:18:18:656:0:0:0,-5.41854,-10 0/0:99:38:38:1432:0:0:0,-10,-10 0/0:52.5558:14:14:510:0:0:0,-4.21442,-10 0/0:85.6689:25:25:939:0:0:0,-7.52575,-10 0/0:73.6279:21:21:742:0:0:0,-6.32163,-10 0/0:99:36:36:1314:0:0:0,-10,-10 0/0:99:30:30:1072:0:0:0,-9.0309,-10 1/1:15.4558:18:0:0:18:656:-10,-5.41854,0 0/0:99:31:31:1125:0:0:0,-9.33193,-10 0/0:99:44:44:1574:0:0:0,-10,-10 0/0:37.5043:9:9:312:0:0:0,-2.70927,-10 0/0:37.5043:9:9:326:0:0:0,-2.70927,-10 0/0:79.6484:23:23:833:0:0:0,-6.92369,-10 0/0:61.5867:17:17:617:0:0:0,-5.11751,-10 0/0:99:32:32:1097:0:0:0,-9.63296,-10 0/0:34.494:8:8:272:0:0:0,-2.40824,-10 0/0:55.5661:15:15:533:0:0:0,-4.51545,-10 0/0:99:48:48:1747:0:0:0,-10,-10 0/0:91.6887:27:27:993:0:0:0,-8.12781,-10 0/0:97.7065:29:29:1055:0:0:0,-8.72987,-10 0/0:99:46:46:1724:0:0:0,-10,-10 0/0:79.6484:23:23:786:0:0:0,-6.92369,-10 0/0:82.6587:24:24:863:0:0:0,-7.22472,-10 0/1:99:37:19:674:18:643:-10,0,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:73.6279:21:21:741:0:0:0,-6.32163,-10 0/0:99:58:58:2128:0:0:0,-10,-10 0/0:99:38:38:1433:0:0:0,-10,-10 0/0:94.6981:28:28:1016:0:0:0,-8.42884,-10 0/1:99:58:33:1188:25:841:-10,0,-10 0/0:91.6887:27:27:979:0:0:0,-8.12781,-10 0/0:99:55:55:1999:0:0:0,-10,-10 0/0:91.6887:27:27:962:0:0:0,-8.12781,-10 0/0:37.5043:9:9:297:0:0:0,-2.70927,-10 0/0:99:58:58:2108:0:0:0,-10,-10 0/0:76.6382:22:22:763:0:0:0,-6.62266,-10 0/0:79.6484:23:23:833:0:0:0,-6.92369,-10 0/0:64.597:18:18:631:0:0:0,-5.41854,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:85.6689:25:25:917:0:0:0,-7.52575,-10 0/0:99:46:46:1684:0:0:0,-10,-10 0/0:82.6587:24:24:883:0:0:0,-7.22472,-10 0/1:99:62:35:1259:27:951:-10,0,-10 0/0:88.6789:26:26:958:0:0:0,-7.82678,-10 0/0:64.597:18:18:652:0:0:0,-5.41854,-10 0/0:99:42:42:1497:0:0:0,-10,-10 0/0:99:37:37:1372:0:0:0,-10,-10 0/0:46.5352:12:12:446:0:0:0,-3.61236,-10 0/0:99:57:57:2021:0:0:0,-10,-10 0/0:79.6484:23:23:847:0:0:0,-6.92369,-10 0/0:70.6176:20:20:706:0:0:0,-6.0206,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:99:34:34:1203:0:0:0,-10,-10 0/0:67.6073:19:19:694:0:0:0,-5.71957,-10 0/0:99:39:39:1386:0:0:0,-10,-10 0/0:64.597:18:18:675:0:0:0,-5.41854,-10 0/0:88.6789:26:26:960:0:0:0,-7.82678,-10 0/0:73.6279:21:21:760:0:0:0,-6.32163,-10 0/0:52.5558:14:14:491:0:0:0,-4.21442,-10 0/0:76.6382:22:22:764:0:0:0,-6.62266,-10 0/0:99:52:52:1898:0:0:0,-10,-10 0/0:99:36:36:1322:0:0:0,-10,-10 0/0:99:31:31:1126:0:0:0,-9.33193,-10 0/0:99:34:33:1237:0:0:0,-9.93399,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:49.5455:13:13:492:0:0:0,-3.91339,-10 0/0:82.6587:24:24:875:0:0:0,-7.22472,-10 0/0:70.6176:20:20:748:0:0:0,-6.0206,-10 0/0:34.494:8:8:304:0:0:0,-2.40824,-10 0/0:88.6789:26:26:941:0:0:0,-7.82678,-10 0/0:99:36:36:1313:0:0:0,-10,-10 0/0:76.6382:22:22:749:0:0:0,-6.62266,-10 scaffold_6 8949071 . C A 664.353 . AB=0.574468;ABP=5.27418;AC=2;AF=0.0108696;AN=184;AO=28;CIGAR=1X;DP=1953;DPB=1953;DPRA=0.875769;EPP=3.32051;EPPR=3.41795;GTI=1;LEN=1;MEANALT=1;MQM=59.3929;MQMR=59.9095;NS=92;NUMALT=1;ODDS=5.92863;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=998;QR=70122;RO=1923;RPP=63.8115;RPPR=4178.75;RUN=1;SAF=15;SAP=3.32051;SAR=13;SRF=971;SRP=3.41795;SRR=952;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.2649:9:9:329:0:0:0,-2.70927,-10 0/0:72.3473:17:17:633:0:0:0,-5.11751,-10 0/0:78.3678:19:19:669:0:0:0,-5.71957,-10 0/0:51.2752:10:10:365:0:0:0,-3.0103,-10 0/0:54.2855:11:11:405:0:0:0,-3.31133,-10 0/0:45.2546:8:8:301:0:0:0,-2.40824,-10 0/0:99:37:37:1386:0:0:0,-10,-10 0/0:99:32:32:1108:0:0:0,-9.63296,-10 0/0:75.3576:18:18:663:0:0:0,-5.41854,-10 0/0:27.1928:2:2:76:0:0:0,-0.60206,-7.22 0/0:51.2752:10:10:377:0:0:0,-3.0103,-10 0/0:54.2855:11:11:411:0:0:0,-3.31133,-10 0/0:99:43:43:1564:0:0:0,-10,-10 0/0:99:45:45:1666:0:0:0,-10,-10 0/0:99:27:27:1007:0:0:0,-8.12781,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:39.234:6:6:228:0:0:0,-1.80618,-10 0/0:99:26:26:936:0:0:0,-7.82678,-10 0/0:99:37:37:1271:0:0:0,-10,-10 0/0:96.43:25:25:875:0:0:0,-7.52575,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:54.2855:11:11:411:0:0:0,-3.31133,-10 0/0:57.2958:12:12:456:0:0:0,-3.61236,-10 0/0:93.4173:24:24:888:0:0:0,-7.22472,-10 0/0:96.43:25:25:912:0:0:0,-7.52575,-10 0/0:99:30:30:1132:0:0:0,-9.0309,-10 0/1:0.00123705:12:0:0:12:455:-10,-3.61236,0 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:99:37:37:1331:0:0:0,-10,-10 0/0:36.2237:5:5:190:0:0:0,-1.50515,-10 0/0:72.3473:17:17:622:0:0:0,-5.11751,-10 0/0:90.4091:23:23:826:0:0:0,-6.92369,-10 0/0:63.3164:14:14:515:0:0:0,-4.21442,-10 0/0:66.3267:15:15:567:0:0:0,-4.51545,-10 0/0:30.2031:3:3:112:0:0:0,-0.90309,-10 0/0:78.3678:19:19:690:0:0:0,-5.71957,-10 0/0:72.3473:17:17:644:0:0:0,-5.11751,-10 0/0:54.2855:11:11:410:0:0:0,-3.31133,-10 0/0:84.3885:21:21:756:0:0:0,-6.32163,-10 0/0:99:42:42:1552:0:0:0,-10,-10 0/0:90.4091:23:23:868:0:0:0,-6.92369,-10 0/0:87.3982:22:22:828:0:0:0,-6.62266,-10 0/0:99:43:43:1547:0:0:0,-10,-10 0/0:93.4173:25:24:867:0:0:0,-7.22472,-10 0/0:78.3678:19:19:674:0:0:0,-5.71957,-10 0/0:99:42:42:1584:0:0:0,-10,-10 0/0:78.3678:19:19:699:0:0:0,-5.71957,-10 0/0:48.2649:9:9:338:0:0:0,-2.70927,-10 0/1:99:35:20:716:15:527:-10,0,-10 0/0:42.2443:7:7:258:0:0:0,-2.10721,-10 0/0:99:34:34:1262:0:0:0,-10,-10 0/0:60.3061:13:13:491:0:0:0,-3.91339,-10 0/0:42.2443:7:7:227:0:0:0,-2.10721,-10 0/0:99:32:32:1123:0:0:0,-9.63296,-10 0/0:57.2958:12:12:432:0:0:0,-3.61236,-10 0/0:84.3885:21:21:749:0:0:0,-6.32163,-10 0/0:39.234:6:6:219:0:0:0,-1.80618,-10 0/0:54.2855:11:11:412:0:0:0,-3.31133,-10 0/0:69.3369:16:16:556:0:0:0,-4.81648,-10 0/0:99:36:36:1325:0:0:0,-10,-10 0/0:96.43:25:25:880:0:0:0,-7.52575,-10 0/0:99:49:49:1800:0:0:0,-10,-10 0/0:99:26:26:900:0:0:0,-7.82678,-10 0/0:45.2546:8:8:282:0:0:0,-2.40824,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:96.43:25:25:915:0:0:0,-7.52575,-10 0/0:57.2958:12:12:456:0:0:0,-3.61236,-10 0/0:99:35:35:1240:0:0:0,-10,-10 0/0:78.3678:19:19:659:0:0:0,-5.71957,-10 0/0:93.4173:24:24:842:0:0:0,-7.22472,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:69.3369:16:16:597:0:0:0,-4.81648,-10 0/0:99:29:29:1028:0:0:0,-8.72987,-10 0/0:87.3982:22:22:836:0:0:0,-6.62266,-10 0/0:25.778:9:8:303:1:16:0,-0.155027,-10 0/0:39.234:6:6:223:0:0:0,-1.80618,-10 0/0:36.2237:5:5:157:0:0:0,-1.50515,-10 0/0:63.3164:14:14:529:0:0:0,-4.21442,-10 0/0:99:41:41:1492:0:0:0,-10,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:99:27:26:965:0:0:0,-7.82678,-10 0/0:99:30:30:1092:0:0:0,-9.0309,-10 0/0:81.3782:20:20:753:0:0:0,-6.0206,-10 0/0:45.2546:8:8:260:0:0:0,-2.40824,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:78.3678:19:19:676:0:0:0,-5.71957,-10 0/0:45.2546:8:8:304:0:0:0,-2.40824,-10 0/0:66.3267:15:15:503:0:0:0,-4.51545,-10 0/0:63.3164:14:14:469:0:0:0,-4.21442,-10 0/0:66.3267:15:15:567:0:0:0,-4.51545,-10 scaffold_6 8981881 . C T 871.759 . AB=0.520548;ABP=3.27802;AC=5;AF=0.0271739;AN=184;AO=39;CIGAR=1X;DP=1382;DPB=1382;DPRA=1.20288;EPP=12.42;EPPR=4.18901;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9724;NS=92;NUMALT=1;ODDS=6.1165;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1434;QR=49112;RO=1343;RPP=87.6977;RPPR=2919.3;RUN=1;SAF=26;SAP=12.42;SAR=13;SRF=685;SRP=4.18901;SRR=658;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:51.506:10:10:375:0:0:0,-3.0103,-10 0/0:51.506:10:10:378:0:0:0,-3.0103,-10 0/0:63.5472:14:14:527:0:0:0,-4.21442,-10 0/0:51.506:10:10:354:0:0:0,-3.0103,-10 0/0:57.5266:12:12:456:0:0:0,-3.61236,-10 0/0:60.5369:13:13:449:0:0:0,-3.91339,-10 0/0:93.6502:24:24:852:0:0:0,-7.22472,-10 0/0:72.5781:17:17:645:0:0:0,-5.11751,-10 0/0:54.5163:11:11:409:0:0:0,-3.31133,-10 0/0:33.4442:4:4:152:0:0:0,-1.20412,-10 0/0:30.4339:3:3:114:0:0:0,-0.90309,-10 0/0:39.4648:6:6:224:0:0:0,-1.80618,-10 0/0:69.5678:16:16:572:0:0:0,-4.81648,-10 0/0:99:32:32:1186:0:0:0,-9.63296,-10 0/0:84.6193:21:21:747:0:0:0,-6.32163,-10 0/0:66.5575:15:15:556:0:0:0,-4.51545,-10 0/0:90.6388:23:23:851:0:0:0,-6.92369,-10 0/0:39.4648:6:6:226:0:0:0,-1.80618,-10 0/0:78.5987:19:19:689:0:0:0,-5.71957,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:78.5987:19:19:687:0:0:0,-5.71957,-10 0/0:69.5678:16:16:608:0:0:0,-4.81648,-10 0/0:54.5163:11:11:411:0:0:0,-3.31133,-10 0/0:75.5884:18:18:676:0:0:0,-5.41854,-10 0/0:57.5266:12:12:449:0:0:0,-3.61236,-10 0/0:60.5369:13:13:492:0:0:0,-3.91339,-10 0/0:51.506:10:10:365:0:0:0,-3.0103,-10 0/0:48.4957:9:9:306:0:0:0,-2.70927,-10 0/0:84.6193:21:21:772:0:0:0,-6.32163,-10 0/0:99:33:33:1186:0:0:0,-9.93399,-10 0/0:39.4648:6:6:216:0:0:0,-1.80618,-10 0/0:39.4648:6:6:204:0:0:0,-1.80618,-10 0/0:78.5987:19:19:700:0:0:0,-5.71957,-10 0/0:63.5472:14:14:486:0:0:0,-4.21442,-10 0/0:78.5987:19:19:709:0:0:0,-5.71957,-10 0/0:45.4854:8:8:282:0:0:0,-2.40824,-10 0/0:57.5266:12:12:451:0:0:0,-3.61236,-10 0/0:69.5678:16:16:602:0:0:0,-4.81648,-10 0/0:57.5266:12:12:452:0:0:0,-3.61236,-10 0/0:72.5781:17:17:624:0:0:0,-5.11751,-10 0/0:87.6296:22:22:769:0:0:0,-6.62266,-10 0/0:66.5575:15:15:563:0:0:0,-4.51545,-10 0/0:69.5678:16:16:596:0:0:0,-4.81648,-10 0/0:99:28:28:1010:0:0:0,-8.42884,-10 0/0:84.6193:21:21:794:0:0:0,-6.32163,-10 0/0:51.506:10:10:354:0:0:0,-3.0103,-10 0/0:99:39:39:1428:0:0:0,-10,-10 0/0:57.5266:12:12:419:0:0:0,-3.61236,-10 0/0:36.4545:5:5:167:0:0:0,-1.50515,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:42.4751:7:7:240:0:0:0,-2.10721,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:60.5369:13:13:465:0:0:0,-3.91339,-10 0/0:48.4957:9:9:320:0:0:0,-2.70927,-10 0/0:99:29:29:1045:0:0:0,-8.72987,-10 0/0:78.5987:19:19:667:0:0:0,-5.71957,-10 0/0:66.5575:15:15:567:0:0:0,-4.51545,-10 0/0:45.4854:8:8:302:0:0:0,-2.40824,-10 0/0:60.5369:13:13:471:0:0:0,-3.91339,-10 0/0:57.5266:12:12:401:0:0:0,-3.61236,-10 0/0:57.5266:12:12:455:0:0:0,-3.61236,-10 0/0:60.5369:13:13:477:0:0:0,-3.91339,-10 0/0:97.3144:34:33:1214:1:16:0,-7.10354,-10 0/0:51.506:10:10:379:0:0:0,-3.0103,-10 0/0:48.4957:9:9:295:0:0:0,-2.70927,-10 0/0:75.5884:18:18:665:0:0:0,-5.41854,-10 0/0:51.506:10:10:379:0:0:0,-3.0103,-10 0/0:51.506:10:10:380:0:0:0,-3.0103,-10 0/1:99:27:20:752:7:244:-10,0,-10 0/1:0.00949189:11:0:0:11:418:-10,-3.31133,0 0/0:42.4751:7:7:264:0:0:0,-2.10721,-10 0/0:78.5987:19:19:697:0:0:0,-5.71957,-10 0/1:51.4844:18:15:547:3:113:-8.03982,0,-10 0/0:72.5781:17:17:587:0:0:0,-5.11751,-10 0/0:78.5987:19:19:716:0:0:0,-5.71957,-10 0/1:0.000296308:6:0:0:6:228:-10,-1.80618,0 0/0:57.5266:12:12:445:0:0:0,-3.61236,-10 0/0:60.5369:13:13:490:0:0:0,-3.91339,-10 0/0:33.4442:4:4:152:0:0:0,-1.20412,-10 0/0:36.4545:5:5:190:0:0:0,-1.50515,-10 0/0:99:40:40:1458:0:0:0,-10,-10 0/0:87.6296:22:22:790:0:0:0,-6.62266,-10 0/0:60.5369:13:13:492:0:0:0,-3.91339,-10 0/0:63.5472:14:14:512:0:0:0,-4.21442,-10 0/1:0.00949189:11:0:0:11:415:-10,-3.31133,0 0/0:27.4236:2:2:52:0:0:0,-0.60206,-4.94 0/0:54.5163:11:11:406:0:0:0,-3.31133,-10 0/0:60.5369:13:13:461:0:0:0,-3.91339,-10 0/0:30.4339:3:3:105:0:0:0,-0.90309,-9.8 0/0:54.5163:11:11:418:0:0:0,-3.31133,-10 0/0:36.4545:5:5:150:0:0:0,-1.50515,-10 0/0:54.5163:11:11:409:0:0:0,-3.31133,-10 scaffold_6 8981888 . C T 14087.7 . AB=0.496988;ABP=3.03646;AC=61;AF=0.331522;AN=184;AO=497;CIGAR=1X;DP=1386;DPB=1386;DPRA=1.28805;EPP=4.58757;EPPR=3.30585;GTI=3;LEN=1;MEANALT=1;MQM=59.9336;MQMR=59.9955;NS=92;NUMALT=1;ODDS=0.0582553;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=18364;QR=32636;RO=889;RPP=1082.23;RPPR=1907.48;RUN=1;SAF=258;SAP=4.58757;SAR=239;SRF=453;SRP=3.71621;SRR=436;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:29.6291:10:10:371:0:0:0,-3.0103,-10 0/0:29.6291:10:10:349:0:0:0,-3.0103,-10 0/0:41.6703:14:14:522:0:0:0,-4.21442,-10 1/1:24.7838:10:0:0:10:377:-10,-3.0103,0 0/0:35.6497:12:12:449:0:0:0,-3.61236,-10 0/0:38.66:13:13:460:0:0:0,-3.91339,-10 1/1:66.928:24:0:0:24:881:-10,-7.22472,0 1/1:45.8559:17:0:0:17:634:-10,-5.11751,0 0/0:32.6394:11:11:418:0:0:0,-3.31133,-10 0/0:11.5673:4:4:152:0:0:0,-1.20412,-10 0/1:0.537066:3:3:114:0:0:0,-0.90309,-10 0/0:17.5879:6:6:224:0:0:0,-1.80618,-10 0/1:99:16:6:205:10:376:-10,0,-10 0/1:99:32:12:456:20:747:-10,0,-10 0/0:62.7424:21:21:767:0:0:0,-6.32163,-10 0/1:99:15:8:301:7:244:-10,0,-10 0/0:68.763:23:23:844:0:0:0,-6.92369,-10 0/0:17.5879:6:6:227:0:0:0,-1.80618,-10 0/1:99:19:8:301:11:387:-10,0,-10 1/1:99:35:0:0:35:1273:-10,-10,0 0/1:99:19:9:336:10:338:-10,0,-10 1/1:42.8456:16:0:0:16:605:-10,-4.81648,0 0/0:32.6394:11:11:412:0:0:0,-3.31133,-10 1/1:48.8662:18:0:0:18:669:-10,-5.41854,0 0/0:35.6497:12:12:443:0:0:0,-3.61236,-10 0/1:99:13:8:302:5:190:-10,0,-10 1/1:24.7838:10:0:0:10:372:-10,-3.0103,0 1/1:21.7735:9:0:0:9:340:-10,-2.70927,0 0/0:62.7424:21:21:778:0:0:0,-6.32163,-10 0/1:99:33:18:657:15:561:-10,0,-10 1/1:12.7426:6:0:0:6:221:-10,-1.80618,0 1/1:12.7426:6:0:0:6:220:-10,-1.80618,0 1/1:54.8868:20:0:0:20:759:-10,-6.0206,0 0/0:41.6703:14:14:528:0:0:0,-4.21442,-10 0/0:56.7218:19:19:698:0:0:0,-5.71957,-10 0/0:23.6085:8:8:292:0:0:0,-2.40824,-10 0/0:35.6497:12:12:453:0:0:0,-3.61236,-10 1/1:42.8456:16:0:0:16:596:-10,-4.81648,0 0/0:35.6497:12:12:437:0:0:0,-3.61236,-10 0/1:91.3393:17:14:509:3:114:-8.355,0,-10 0/1:99:22:10:339:12:454:-10,0,-10 1/1:39.8353:15:0:0:15:551:-10,-4.51545,0 0/0:47.6909:16:16:602:0:0:0,-4.81648,-10 0/1:99:28:19:681:9:342:-10,0,-10 0/0:62.7424:21:21:765:0:0:0,-6.32163,-10 0/1:99:10:5:168:5:190:-10,0,-10 0/1:99:40:23:852:17:635:-10,0,-10 1/1:30.8044:12:0:0:12:405:-10,-3.61236,0 0/1:0.66075:5:0:0:5:188:-10,-1.50515,0 0/1:99:32:13:468:19:697:-10,0,-10 1/1:15.7529:7:0:0:7:264:-10,-2.10721,0 1/1:99:35:0:0:35:1302:-10,-10,0 1/1:33.8147:13:0:0:13:485:-10,-3.91339,0 1/1:21.7735:9:0:0:9:339:-10,-2.70927,0 0/1:99:29:14:502:15:550:-10,0,-10 1/1:51.8765:19:0:0:19:715:-10,-5.71957,0 1/1:39.8353:15:0:0:15:567:-10,-4.51545,0 0/0:23.6085:8:8:303:0:0:0,-2.40824,-10 0/0:38.66:13:13:491:0:0:0,-3.91339,-10 0/0:35.6497:12:12:441:0:0:0,-3.61236,-10 0/0:35.6497:12:12:446:0:0:0,-3.61236,-10 0/0:38.66:13:13:470:0:0:0,-3.91339,-10 0/0:99:34:34:1217:0:0:0,-10,-10 0/0:29.6291:10:10:369:0:0:0,-3.0103,-10 1/1:21.7735:9:0:0:9:296:-10,-2.70927,0 0/0:53.7115:18:18:678:0:0:0,-5.41854,-10 0/0:29.6291:10:10:376:0:0:0,-3.0103,-10 0/0:29.6291:10:10:380:0:0:0,-3.0103,-10 0/0:83.8143:28:28:1010:0:0:0,-8.42884,-10 0/0:32.6394:11:11:416:0:0:0,-3.31133,-10 0/0:20.5982:7:7:244:0:0:0,-2.10721,-10 0/0:56.7218:19:19:680:0:0:0,-5.71957,-10 0/0:53.7115:18:18:657:0:0:0,-5.41854,-10 0/0:50.7012:17:17:590:0:0:0,-5.11751,-10 0/0:56.7218:19:19:722:0:0:0,-5.71957,-10 0/0:17.5879:6:6:228:0:0:0,-1.80618,-10 0/0:35.6497:12:12:428:0:0:0,-3.61236,-10 0/0:38.66:13:13:489:0:0:0,-3.91339,-10 0/0:11.5673:4:4:152:0:0:0,-1.20412,-10 0/0:14.5776:5:5:188:0:0:0,-1.50515,-10 0/0:99:40:40:1513:0:0:0,-10,-10 0/0:65.7527:22:22:777:0:0:0,-6.62266,-10 0/0:38.66:13:13:493:0:0:0,-3.91339,-10 0/0:41.6703:14:14:472:0:0:0,-4.21442,-10 0/0:32.6394:11:11:418:0:0:0,-3.31133,-10 0/1:0.0773015:2:0:0:2:71:-6.745,-0.60206,0 1/1:27.7941:11:0:0:11:409:-10,-3.31133,0 0/0:38.66:13:13:485:0:0:0,-3.91339,-10 0/0:8.55699:3:3:114:0:0:0,-0.90309,-10 0/0:32.6394:11:11:413:0:0:0,-3.31133,-10 0/0:17.5879:6:6:204:0:0:0,-1.80618,-10 0/0:32.6394:11:11:390:0:0:0,-3.31133,-10 scaffold_6 8983047 . G A 236.495 . AB=0.625;ABP=5.18177;AC=1;AF=0.00549451;AN=182;AO=10;CIGAR=1X;DP=1664;DPB=1664;DPRA=0.873786;EPP=3.87889;EPPR=3.34639;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8585;NS=91;NUMALT=1;ODDS=10.2086;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=375;QR=60320;RO=1654;RPP=24.725;RPPR=3594.63;RUN=1;SAF=4;SAP=3.87889;SAR=6;SRF=819;SRP=3.34639;SRR=835;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.4081:10:10:374:0:0:0,-3.0103,-10 0/0:74.439:13:13:491:0:0:0,-3.91339,-10 0/0:95.5086:20:20:728:0:0:0,-6.0206,-10 0/0:77.4493:14:14:527:0:0:0,-4.21442,-10 0/0:77.4493:14:14:528:0:0:0,-4.21442,-10 0/0:47.3463:4:4:148:0:0:0,-1.20412,-10 0/0:99:43:43:1507:0:0:0,-10,-10 0/0:95.5086:20:20:751:0:0:0,-6.0206,-10 0/0:47.3463:4:4:150:0:0:0,-1.20412,-10 .:.:.:.:.:.:.:. 0/0:65.4081:10:10:377:0:0:0,-3.0103,-10 0/0:68.4184:11:11:399:0:0:0,-3.31133,-10 0/0:99:24:24:874:0:0:0,-7.22472,-10 0/0:99:31:31:1104:0:0:0,-9.33193,-10 0/0:98.5163:21:21:768:0:0:0,-6.32163,-10 0/0:95.5086:20:20:755:0:0:0,-6.0206,-10 0/0:86.4803:17:17:610:0:0:0,-5.11751,-10 0/0:47.3463:4:4:152:0:0:0,-1.20412,-10 0/0:99:23:23:792:0:0:0,-6.92369,-10 0/0:99:37:37:1354:0:0:0,-10,-10 0/0:77.4493:14:14:521:0:0:0,-4.21442,-10 0/0:86.4803:17:17:617:0:0:0,-5.11751,-10 0/0:56.3772:7:7:242:0:0:0,-2.10721,-10 0/0:99:23:23:821:0:0:0,-6.92369,-10 0/0:77.4493:14:14:509:0:0:0,-4.21442,-10 0/0:99:25:25:896:0:0:0,-7.52575,-10 0/0:95.5086:20:20:730:0:0:0,-6.0206,-10 0/0:77.4493:14:14:523:0:0:0,-4.21442,-10 0/0:80.4596:15:15:551:0:0:0,-4.51545,-10 0/0:99:45:45:1614:0:0:0,-10,-10 0/0:59.3875:8:8:303:0:0:0,-2.40824,-10 0/0:62.3978:9:9:341:0:0:0,-2.70927,-10 0/0:74.439:13:13:485:0:0:0,-3.91339,-10 0/0:71.4287:12:12:447:0:0:0,-3.61236,-10 0/0:86.4803:17:17:616:0:0:0,-5.11751,-10 0/0:53.3669:6:6:219:0:0:0,-1.80618,-10 0/0:98.5163:21:21:777:0:0:0,-6.32163,-10 0/0:99:22:22:820:0:0:0,-6.62266,-10 0/0:89.4899:18:18:659:0:0:0,-5.41854,-10 0/0:65.4081:10:10:339:0:0:0,-3.0103,-10 0/0:99:46:46:1710:0:0:0,-10,-10 0/0:74.439:13:13:463:0:0:0,-3.91339,-10 0/0:77.4493:14:14:500:0:0:0,-4.21442,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:98.5163:21:21:748:0:0:0,-6.32163,-10 0/0:71.4287:12:12:444:0:0:0,-3.61236,-10 0/0:99:35:35:1292:0:0:0,-10,-10 0/0:95.5086:20:20:720:0:0:0,-6.0206,-10 0/0:59.3875:8:8:282:0:0:0,-2.40824,-10 0/0:99:33:33:1166:0:0:0,-9.93399,-10 0/0:74.439:13:13:491:0:0:0,-3.91339,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:59.3875:8:8:303:0:0:0,-2.40824,-10 0/0:53.3669:6:6:227:0:0:0,-1.80618,-10 0/0:99:40:40:1471:0:0:0,-10,-10 0/0:74.439:13:13:473:0:0:0,-3.91339,-10 0/0:95.5086:20:20:755:0:0:0,-6.0206,-10 0/0:68.4184:11:11:397:0:0:0,-3.31133,-10 0/0:86.4803:17:17:642:0:0:0,-5.11751,-10 0/0:86.4803:17:17:623:0:0:0,-5.11751,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:77.4493:14:14:508:0:0:0,-4.21442,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:77.4493:14:14:510:0:0:0,-4.21442,-10 0/0:59.3875:8:8:278:0:0:0,-2.40824,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:99:23:23:856:0:0:0,-6.92369,-10 0/0:65.4081:10:10:350:0:0:0,-3.0103,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:92.4995:19:19:682:0:0:0,-5.71957,-10 0/0:74.439:13:13:483:0:0:0,-3.91339,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:99:25:25:924:0:0:0,-7.52575,-10 0/0:99:22:22:762:0:0:0,-6.62266,-10 0/0:98.5163:21:21:775:0:0:0,-6.32163,-10 0/0:74.439:13:13:426:0:0:0,-3.91339,-10 0/0:74.439:13:13:442:0:0:0,-3.91339,-10 0/0:86.4803:17:17:640:0:0:0,-5.11751,-10 0/0:56.3772:7:7:242:0:0:0,-2.10721,-10 0/0:65.4081:10:10:371:0:0:0,-3.0103,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:99:24:24:856:0:0:0,-7.22472,-10 0/0:92.4995:19:19:689:0:0:0,-5.71957,-10 0/0:99:22:22:828:0:0:0,-6.62266,-10 0/0:92.4995:19:19:685:0:0:0,-5.71957,-10 0/0:47.3463:4:4:130:0:0:0,-1.20412,-10 0/0:71.4287:12:12:433:0:0:0,-3.61236,-10 0/0:65.4081:10:10:365:0:0:0,-3.0103,-10 0/0:44.336:3:3:111:0:0:0,-0.90309,-10 0/1:99:16:6:220:10:375:-10,0,-10 0/0:68.4184:11:11:392:0:0:0,-3.31133,-10 0/0:83.47:16:16:599:0:0:0,-4.81648,-10 scaffold_6 9036949 . G A 19028.9 . AB=0.52187;ABP=5.76476;AC=41;AF=0.222826;AN=184;AO=673;CIGAR=1X;DP=2734;DPB=2734;DPRA=1.23515;EPP=4.17509;EPPR=3.11571;GTI=0;LEN=1;MEANALT=1;MQM=59.9138;MQMR=59.9665;NS=92;NUMALT=1;ODDS=0.0841682;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=24363;QR=74567;RO=2060;RPP=1464.41;RPPR=4467.56;RUN=1;SAF=327;SAP=4.17509;SAR=346;SRF=1024;SRP=3.16209;SRR=1036;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:66.6898:23:23:843:0:0:0,-6.92369,-10 0/0:54.6487:19:19:701:0:0:0,-5.71957,-10 0/1:99:29:12:424:17:600:-10,0,-10 0/0:45.6178:16:16:576:0:0:0,-4.81648,-10 0/0:57.659:20:20:713:0:0:0,-6.0206,-10 0/0:54.6487:19:19:682:0:0:0,-5.71957,-10 0/0:99:57:57:2057:0:0:0,-10,-10 0/0:99:43:43:1523:0:0:0,-10,-10 0/0:72.7104:25:25:892:0:0:0,-7.52575,-10 0/0:15.5148:6:6:217:0:0:0,-1.80618,-10 0/1:30.1572:6:1:27:5:190:-10,0,-1.67197 0/0:27.556:10:10:370:0:0:0,-3.0103,-10 0/0:99:43:43:1541:0:0:0,-10,-10 0/1:99:46:17:626:29:1036:-10,0,-10 0/0:99:38:38:1401:0:0:0,-10,-10 0/1:99:48:29:1035:19:674:-10,0,-10 0/0:99:43:43:1572:0:0:0,-10,-10 0/0:39.5972:14:14:499:0:0:0,-4.21442,-10 0/0:90.7707:31:31:1122:0:0:0,-9.33193,-10 0/0:99:64:64:2363:0:0:0,-10,-10 0/1:99:27:11:398:16:569:-10,0,-10 0/0:99:34:34:1238:0:0:0,-10,-10 0/0:39.5972:14:14:518:0:0:0,-4.21442,-10 1/1:92.6747:33:0:0:33:1208:-10,-9.93399,0 0/0:99:37:37:1359:0:0:0,-10,-10 0/0:99:38:38:1381:0:0:0,-10,-10 0/0:42.6075:15:15:564:0:0:0,-4.51545,-10 1/1:65.5844:24:0:0:24:800:-10,-7.22472,0 0/0:45.6178:16:16:565:0:0:0,-4.81648,-10 0/1:99:49:20:694:29:1057:-10,0,-10 0/0:18.5251:7:7:255:0:0:0,-2.10721,-10 0/0:3.47355:2:2:76:0:0:0,-0.60206,-7.22 0/0:69.7001:24:24:832:0:0:0,-7.22472,-10 0/0:54.6487:19:19:685:0:0:0,-5.71957,-10 0/0:84.7513:29:29:1037:0:0:0,-8.72987,-10 0/0:36.5869:13:13:489:0:0:0,-3.91339,-10 0/0:45.6178:16:16:586:0:0:0,-4.81648,-10 0/1:99:34:18:666:16:603:-10,0,-10 0/0:99:39:39:1430:0:0:0,-10,-10 0/0:60.6693:21:21:735:0:0:0,-6.32163,-10 0/0:99:48:48:1731:0:0:0,-10,-10 1/1:74.6153:27:0:0:27:997:-10,-8.12781,0 0/0:75.7207:26:26:915:0:0:0,-7.82678,-10 0/1:99:60:27:1012:33:1194:-10,0,-10 0/0:99:35:35:1300:0:0:0,-10,-10 0/1:99:25:17:617:8:281:-10,0,-10 0/1:99:70:36:1324:34:1261:-10,0,-10 1/1:99:49:0:0:49:1774:-10,-10,0 1/1:44.5123:17:0:0:17:614:-10,-5.11751,0 0/1:99:45:21:702:24:842:-10,0,-10 1/1:62.5741:23:0:0:23:834:-10,-6.92369,0 0/1:99:60:27:971:33:1177:-10,0,-10 0/0:63.6795:22:22:790:0:0:0,-6.62266,-10 1/1:20.4299:9:0:0:9:317:-10,-2.70927,0 0/1:99:60:30:1067:30:1091:-10,0,-10 1/1:68.5947:25:0:0:25:937:-10,-7.52575,0 1/1:56.8221:38:1:38:37:1367:-10,-6.05936,0 0/0:42.6075:15:15:537:0:0:0,-4.51545,-10 1/1:99:38:0:0:38:1349:-10,-10,0 0/0:54.6487:19:19:681:0:0:0,-5.71957,-10 0/0:99:43:43:1565:0:0:0,-10,-10 0/0:72.7104:25:25:898:0:0:0,-7.52575,-10 0/0:99:56:56:2066:0:0:0,-10,-10 0/0:81.7412:28:28:1024:0:0:0,-8.42884,-10 1/1:53.5432:20:0:0:20:751:-10,-6.0206,0 0/0:99:46:46:1640:0:0:0,-10,-10 0/1:99:30:14:523:16:569:-10,0,-10 0/0:42.6075:15:15:539:0:0:0,-4.51545,-10 0/0:99:54:53:1927:0:0:0,-10,-10 0/0:27.556:10:10:351:0:0:0,-3.0103,-10 0/0:81.7412:28:28:1021:0:0:0,-8.42884,-10 0/0:99:45:45:1674:0:0:0,-10,-10 0/0:99:37:37:1330:0:0:0,-10,-10 0/0:84.7513:29:29:1070:0:0:0,-8.72987,-10 0/0:99:44:44:1602:0:0:0,-10,-10 0/0:69.7001:24:24:809:0:0:0,-7.22472,-10 0/0:54.6487:19:19:714:0:0:0,-5.71957,-10 0/0:90.7707:31:31:1115:0:0:0,-9.33193,-10 0/0:27.556:10:10:373:0:0:0,-3.0103,-10 0/0:45.6178:16:16:601:0:0:0,-4.81648,-10 0/0:99:50:50:1748:0:0:0,-10,-10 0/1:99:39:15:535:24:873:-10,0,-10 0/0:87.7612:30:30:1089:0:0:0,-9.0309,-10 0/0:87.7612:30:30:1061:0:0:0,-9.0309,-10 0/0:99:34:34:1231:0:0:0,-10,-10 0/0:24.5457:9:9:316:0:0:0,-2.70927,-10 1/1:68.5947:25:0:0:25:912:-10,-7.52575,0 0/0:69.7001:24:24:818:0:0:0,-7.22472,-10 0/1:99:7:3:113:4:147:-10,0,-9.98352 0/0:78.731:27:27:1011:0:0:0,-8.12781,-10 0/1:99:28:19:713:9:339:-10,0,-10 0/0:54.6487:19:19:713:0:0:0,-5.71957,-10 scaffold_6 9036958 . G A 25718.4 . AB=0.496955;ABP=3.07642;AC=60;AF=0.326087;AN=184;AO=902;CIGAR=1X;DP=2734;DPB=2734;DPRA=1.23483;EPP=6.48658;EPPR=7.27739;GTI=1;LEN=1;MEANALT=1;MQM=59.908;MQMR=59.976;NS=92;NUMALT=1;ODDS=1.78813;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=32798;QR=66473;RO=1832;RPP=1961.68;RPPR=3903.36;RUN=1;SAF=470;SAP=6.48658;SAR=432;SRF=881;SRP=8.81828;SRR=951;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:68.0988:23:23:820:0:0:0,-6.92369,-10 0/0:56.0576:19:19:693:0:0:0,-5.71957,-10 0/0:86.1601:29:29:1036:0:0:0,-8.72987,-10 0/0:47.0267:16:16:597:0:0:0,-4.81648,-10 1/1:48.4791:20:0:0:20:710:-10,-6.0206,0 1/1:45.4688:19:0:0:19:708:-10,-5.71957,0 0/1:99:57:30:1113:27:958:-10,0,-10 0/1:99:43:21:699:22:804:-10,0,-10 1/1:63.5306:25:0:0:25:888:-10,-7.52575,0 0/0:16.9237:6:6:224:0:0:0,-1.80618,-10 0/0:16.9237:6:6:227:0:0:0,-1.80618,-10 0/0:28.9649:10:10:367:0:0:0,-3.0103,-10 1/1:99:43:0:0:43:1575:-10,-10,0 0/1:99:46:28:1028:18:661:-10,0,-10 0/1:99:38:27:962:11:372:-10,0,-10 0/0:99:48:48:1753:0:0:0,-10,-10 0/0:99:43:43:1584:0:0:0,-10,-10 1/1:30.4173:14:0:0:14:509:-10,-4.21442,0 0/1:99:31:18:647:13:480:-10,0,-10 0/1:99:64:33:1188:31:1175:-10,0,-10 0/0:80.1399:27:27:978:0:0:0,-8.12781,-10 0/1:99:34:15:545:19:677:-10,0,-10 0/0:41.0061:14:14:499:0:0:0,-4.21442,-10 0/0:98.193:33:33:1181:0:0:0,-9.93399,-10 0/0:99:37:37:1362:0:0:0,-10,-10 0/1:99:38:16:587:22:793:-10,0,-10 1/1:33.4276:15:0:0:15:561:-10,-4.51545,0 0/0:71.1091:24:24:834:0:0:0,-7.22472,-10 0/0:47.0267:16:16:581:0:0:0,-4.81648,-10 0/1:99:49:29:986:20:721:-10,0,-10 1/1:9.34518:7:0:0:7:252:-10,-2.10721,0 0/1:0.333615:2:0:0:2:65:-6.175,-0.60206,0 1/1:60.5203:24:0:0:24:896:-10,-7.22472,0 0/0:56.0576:19:19:720:0:0:0,-5.71957,-10 0/0:86.1601:29:29:1011:0:0:0,-8.72987,-10 0/0:37.9958:13:13:480:0:0:0,-3.91339,-10 0/0:47.0267:16:16:587:0:0:0,-4.81648,-10 0/1:99:34:16:579:18:642:-10,0,-10 0/0:64.9578:39:38:1420:1:38:0,-6.34911,-10 0/1:99:21:8:294:13:437:-10,0,-10 0/1:99:48:20:749:28:1001:-10,0,-10 0/0:80.1399:27:27:966:0:0:0,-8.12781,-10 0/0:77.1297:26:26:929:0:0:0,-7.82678,-10 0/0:99:60:60:2174:0:0:0,-10,-10 0/0:99:35:35:1285:0:0:0,-10,-10 0/1:99:25:8:291:17:624:-10,0,-10 0/1:99:70:34:1275:36:1315:-10,0,-10 0/0:99:49:49:1775:0:0:0,-10,-10 0/0:50.037:17:17:595:0:0:0,-5.11751,-10 0/0:99:45:45:1560:0:0:0,-10,-10 0/0:68.0988:23:23:837:0:0:0,-6.92369,-10 0/1:99:60:33:1242:27:988:-10,0,-10 1/1:54.4997:22:0:0:22:808:-10,-6.62266,0 0/0:25.9546:9:9:278:0:0:0,-2.70927,-10 0/1:99:60:30:1081:30:1038:-10,0,-10 0/0:74.1194:25:25:930:0:0:0,-7.52575,-10 0/0:62.0603:38:37:1319:1:38:0,-6.05936,-10 0/0:44.0164:15:15:556:0:0:0,-4.51545,-10 0/0:99:38:38:1334:0:0:0,-10,-10 0/0:56.0576:19:19:700:0:0:0,-5.71957,-10 1/1:99:43:0:0:43:1587:-10,-10,0 1/1:63.5306:25:0:0:25:926:-10,-7.52575,0 1/1:99:56:1:38:55:1999:-10,-10,0 0/1:99:28:16:590:12:456:-10,0,-10 0/0:59.0679:20:20:734:0:0:0,-6.0206,-10 0/1:99:46:17:613:29:1037:-10,0,-10 0/0:89.1698:30:30:1114:0:0:0,-9.0309,-10 1/1:33.4276:15:0:0:15:533:-10,-4.51545,0 1/1:99:54:0:0:54:1993:-10,-10,0 1/1:18.3761:10:0:0:10:379:-10,-3.0103,0 0/0:83.15:28:28:999:0:0:0,-8.42884,-10 0/0:99:45:45:1653:0:0:0,-10,-10 0/0:99:37:37:1375:0:0:0,-10,-10 0/0:86.1601:29:29:1049:0:0:0,-8.72987,-10 0/0:99:44:44:1606:0:0:0,-10,-10 1/1:18.9482:24:1:31:23:841:-10,-2.74451,0 0/0:56.0576:19:19:686:0:0:0,-5.71957,-10 0/0:92.179:31:31:1116:0:0:0,-9.33193,-10 0/0:28.9649:10:10:380:0:0:0,-3.0103,-10 1/1:36.4379:16:0:0:16:573:-10,-4.81648,0 0/0:99:50:50:1831:0:0:0,-10,-10 0/0:99:39:39:1456:0:0:0,-10,-10 0/0:89.1698:30:30:1073:0:0:0,-9.0309,-10 0/0:89.1698:30:30:1094:0:0:0,-9.0309,-10 1/1:90.6217:34:0:0:34:1250:-10,-10,0 1/1:15.3658:9:0:0:9:328:-10,-2.70927,0 0/0:74.1194:25:25:892:0:0:0,-7.52575,-10 0/0:71.1091:24:24:878:0:0:0,-7.22472,-10 0/0:19.934:7:7:260:0:0:0,-2.10721,-10 0/1:99:27:14:524:13:450:-10,0,-10 0/0:83.15:28:28:1023:0:0:0,-8.42884,-10 1/1:45.4688:19:0:0:19:712:-10,-5.71957,0 scaffold_6 9084681 . T C 299.19 . AB=0.448276;ABP=3.68421;AC=2;AF=0.0108696;AN=184;AO=14;CIGAR=1X;DP=1361;DPB=1361;DPRA=1.24936;EPP=3.63072;EPPR=4.01785;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9607;NS=92;NUMALT=1;ODDS=8.0642;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=527;QR=49478;RO=1347;RPP=33.4109;RPPR=2876.1;RUN=1;SAF=6;SAP=3.63072;SAR=8;SRF=692;SRP=5.21724;SRR=655;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.1079:9:9:319:0:0:0,-2.70927,-10 0/0:47.0667:5:5:186:0:0:0,-1.50515,-10 0/0:92.2203:20:20:713:0:0:0,-6.0206,-10 0/0:68.1388:12:12:449:0:0:0,-3.61236,-10 0/0:59.1079:9:9:340:0:0:0,-2.70927,-10 0/0:62.1182:10:10:328:0:0:0,-3.0103,-10 0/0:92.2203:20:20:744:0:0:0,-6.0206,-10 0/1:99:17:11:393:6:227:-10,0,-10 0/0:53.0873:7:7:264:0:0:0,-2.10721,-10 0/0:35.0255:1:1:38:0:0:0,-0.30103,-3.8 0/0:53.0873:7:7:261:0:0:0,-2.10721,-10 0/0:41.0461:3:3:113:0:0:0,-0.90309,-10 0/0:99:25:25:902:0:0:0,-7.52575,-10 0/0:99:27:27:959:0:0:0,-8.12781,-10 0/0:77.1697:15:15:564:0:0:0,-4.51545,-10 0/0:80.18:16:16:602:0:0:0,-4.81648,-10 0/0:59.1079:9:9:331:0:0:0,-2.70927,-10 0/0:65.1285:11:11:408:0:0:0,-3.31133,-10 0/0:83.1903:17:17:624:0:0:0,-5.11751,-10 0/0:92.2203:20:20:708:0:0:0,-6.0206,-10 0/0:65.1285:11:11:398:0:0:0,-3.31133,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:74.1594:14:14:519:0:0:0,-4.21442,-10 0/0:77.1697:15:15:564:0:0:0,-4.51545,-10 0/0:71.1491:13:13:491:0:0:0,-3.91339,-10 0/0:86.2004:18:18:652:0:0:0,-5.41854,-10 0/0:65.1285:11:11:411:0:0:0,-3.31133,-10 0/0:62.1182:10:10:353:0:0:0,-3.0103,-10 0/0:77.1697:15:15:542:0:0:0,-4.51545,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:53.0873:7:7:266:0:0:0,-2.10721,-10 0/0:53.0873:7:7:253:0:0:0,-2.10721,-10 0/0:74.1594:14:14:498:0:0:0,-4.21442,-10 0/0:59.1079:9:9:319:0:0:0,-2.70927,-10 0/0:77.1697:15:15:544:0:0:0,-4.51545,-10 0/0:56.0976:8:8:277:0:0:0,-2.40824,-10 0/0:53.0873:7:7:265:0:0:0,-2.10721,-10 0/0:99:26:26:960:0:0:0,-7.82678,-10 0/0:65.1285:11:11:394:0:0:0,-3.31133,-10 0/0:92.2203:20:20:743:0:0:0,-6.0206,-10 0/0:68.1388:12:12:455:0:0:0,-3.61236,-10 0/0:77.1697:15:15:521:0:0:0,-4.51545,-10 0/0:50.077:6:6:219:0:0:0,-1.80618,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/1:99:12:5:167:7:262:-10,0,-10 0/0:65.1285:11:11:411:0:0:0,-3.31133,-10 0/0:99:28:28:1041:0:0:0,-8.42884,-10 0/0:99:24:24:892:0:0:0,-7.22472,-10 0/0:53.0873:7:7:259:0:0:0,-2.10721,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:47.0667:5:5:190:0:0:0,-1.50515,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:65.1285:11:11:401:0:0:0,-3.31133,-10 0/0:50.077:6:6:225:0:0:0,-1.80618,-10 0/0:99:28:28:1041:0:0:0,-8.42884,-10 0/0:68.1388:12:12:455:0:0:0,-3.61236,-10 0/0:92.2203:20:20:732:0:0:0,-6.0206,-10 0/0:56.0976:8:8:303:0:0:0,-2.40824,-10 0/0:98.2416:22:22:823:0:0:0,-6.62266,-10 0/0:71.1491:13:13:490:0:0:0,-3.91339,-10 0/0:99:23:23:833:0:0:0,-6.92369,-10 0/0:92.2203:20:20:693:0:0:0,-6.0206,-10 0/0:95.2297:21:21:750:0:0:0,-6.32163,-10 0/0:83.1903:17:17:629:0:0:0,-5.11751,-10 0/0:62.1182:10:10:367:0:0:0,-3.0103,-10 0/0:99:27:27:952:0:0:0,-8.12781,-10 0/0:71.1491:13:13:471:0:0:0,-3.91339,-10 0/0:68.1388:12:12:431:0:0:0,-3.61236,-10 0/0:99:28:28:1054:0:0:0,-8.42884,-10 0/0:50.077:6:6:225:0:0:0,-1.80618,-10 0/0:77.1697:15:15:562:0:0:0,-4.51545,-10 0/0:99:27:27:1016:0:0:0,-8.12781,-10 0/0:74.1594:14:14:519:0:0:0,-4.21442,-10 0/0:83.1903:17:17:632:0:0:0,-5.11751,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/0:68.1388:12:12:450:0:0:0,-3.61236,-10 0/0:80.18:16:16:604:0:0:0,-4.81648,-10 0/0:65.1285:11:11:415:0:0:0,-3.31133,-10 0/0:41.0461:3:3:110:0:0:0,-0.90309,-10 0/0:59.1079:9:9:337:0:0:0,-2.70927,-10 0/0:60.3031:26:25:926:1:38:0,-2.61181,-10 0/0:86.2004:18:18:682:0:0:0,-5.41854,-10 0/0:95.2297:21:21:797:0:0:0,-6.32163,-10 0/0:77.1697:15:15:556:0:0:0,-4.51545,-10 0/0:77.1697:15:15:549:0:0:0,-4.51545,-10 0/0:44.0564:4:4:146:0:0:0,-1.20412,-10 0/0:71.1491:13:13:494:0:0:0,-3.91339,-10 0/0:62.1182:10:10:371:0:0:0,-3.0103,-10 0/0:41.0461:3:3:114:0:0:0,-0.90309,-10 0/0:77.1697:15:15:548:0:0:0,-4.51545,-10 0/0:56.0976:8:8:300:0:0:0,-2.40824,-10 0/0:50.077:6:6:206:0:0:0,-1.80618,-10 scaffold_6 9193565 . G T 507.123 . AB=0.527778;ABP=3.25157;AC=1;AF=0.00543478;AN=184;AO=22;CIGAR=1X;DP=2346;DPB=2346;DPRA=0.837168;EPP=3.40511;EPPR=9.92089;GTI=1;LEN=1;MEANALT=1;MQM=58.6364;MQMR=59.938;NS=92;NUMALT=1;ODDS=5.70525;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=763;QR=84329;RO=2324;RPP=50.7827;RPPR=5040.83;RUN=1;SAF=12;SAP=3.40511;SAR=10;SRF=1206;SRP=10.246;SRR=1118;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:93.0212:23:23:823:0:0:0,-6.92369,-10 0/0:53.8878:10:10:363:0:0:0,-3.0103,-10 0/0:99:27:27:968:0:0:0,-8.12781,-10 0/0:90.0111:22:22:812:0:0:0,-6.62266,-10 0/0:80.9803:19:19:696:0:0:0,-5.71957,-10 0/0:59.9084:12:12:455:0:0:0,-3.61236,-10 0/0:99:62:62:2250:0:0:0,-10,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:68.9393:15:15:555:0:0:0,-4.51545,-10 0/0:56.8981:11:11:381:0:0:0,-3.31133,-10 0/0:38.8363:5:5:181:0:0:0,-1.50515,-10 0/0:41.8466:6:6:205:0:0:0,-1.80618,-10 0/0:99:47:47:1668:0:0:0,-10,-10 0/0:99:38:38:1389:0:0:0,-10,-10 0/0:99:37:37:1318:0:0:0,-10,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:53.8878:10:10:376:0:0:0,-3.0103,-10 0/0:99:38:38:1394:0:0:0,-10,-10 0/0:99:36:36:1258:0:0:0,-10,-10 0/0:90.0111:22:22:801:0:0:0,-6.62266,-10 0/0:99:35:35:1312:0:0:0,-10,-10 0/0:74.9599:17:17:571:0:0:0,-5.11751,-10 0/0:80.9803:19:19:714:0:0:0,-5.71957,-10 0/0:50.8775:9:9:339:0:0:0,-2.70927,-10 0/0:99:28:28:973:0:0:0,-8.42884,-10 0/0:99:33:33:1147:0:0:0,-9.93399,-10 0/0:45.8673:16:15:540:1:16:0,-2.01236,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:99:54:54:2019:0:0:0,-10,-10 0/0:38.8363:5:5:167:0:0:0,-1.50515,-10 0/0:0.0144207:8:7:263:1:16:-0.09485,0,-10 0/0:87.0005:21:21:736:0:0:0,-6.32163,-10 0/0:73.8617:26:25:932:1:16:0,-4.81181,-10 0/0:99:43:43:1570:0:0:0,-10,-10 0/0:50.8775:9:9:318:0:0:0,-2.70927,-10 0/0:44.8569:7:7:243:0:0:0,-2.10721,-10 0/0:90.0111:22:22:801:0:0:0,-6.62266,-10 0/0:93.0212:23:23:852:0:0:0,-6.92369,-10 0/0:87.0005:21:21:782:0:0:0,-6.32163,-10 0/0:99:50:50:1848:0:0:0,-10,-10 0/0:93.0212:23:23:828:0:0:0,-6.92369,-10 0/0:99:25:25:925:0:0:0,-7.52575,-10 0/0:99:38:38:1370:0:0:0,-10,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:90.0111:22:22:831:0:0:0,-6.62266,-10 0/0:99:50:50:1828:0:0:0,-10,-10 0/0:99:38:38:1425:0:0:0,-10,-10 0/0:83.9905:20:20:733:0:0:0,-6.0206,-10 0/0:99:43:43:1522:0:0:0,-10,-10 0/0:56.8981:11:11:395:0:0:0,-3.31133,-10 0/0:99:41:41:1505:0:0:0,-10,-10 0/0:80.9803:19:19:660:0:0:0,-5.71957,-10 0/0:35.826:4:4:145:0:0:0,-1.20412,-10 0/0:99:53:53:1954:0:0:0,-10,-10 0/0:71.9496:16:16:608:0:0:0,-4.81648,-10 0/0:99:28:28:970:0:0:0,-8.42884,-10 0/0:59.9084:12:12:430:0:0:0,-3.61236,-10 0/0:62.9187:13:13:488:0:0:0,-3.91339,-10 0/0:62.9187:13:13:480:0:0:0,-3.91339,-10 0/0:99:36:36:1253:0:0:0,-10,-10 0/0:99:28:28:1043:0:0:0,-8.42884,-10 0/0:99:49:49:1776:0:0:0,-10,-10 0/0:93.0212:23:23:825:0:0:0,-6.92369,-10 0/0:90.0111:22:22:791:0:0:0,-6.62266,-10 0/0:99:41:41:1451:0:0:0,-10,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:68.9393:15:15:501:0:0:0,-4.51545,-10 0/0:99:46:46:1696:0:0:0,-10,-10 0/0:59.9084:12:12:452:0:0:0,-3.61236,-10 0/0:99:28:28:1004:0:0:0,-8.42884,-10 0/0:99:36:36:1311:0:0:0,-10,-10 0/0:99:36:36:1283:0:0:0,-10,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:99:40:40:1441:0:0:0,-10,-10 0/0:71.9496:16:16:585:0:0:0,-4.81648,-10 0/0:68.9393:15:15:547:0:0:0,-4.51545,-10 0/0:62.9187:13:13:466:0:0:0,-3.91339,-10 0/0:53.8878:10:10:375:0:0:0,-3.0103,-10 0/0:71.9496:16:16:549:0:0:0,-4.81648,-10 0/0:99:47:47:1687:0:0:0,-10,-10 0/0:99:31:31:1105:0:0:0,-9.33193,-10 0/1:99:36:17:618:19:715:-10,0,-10 0/0:99:29:29:1034:0:0:0,-8.72987,-10 0/0:99:32:32:1200:0:0:0,-9.63296,-10 0/0:44.8569:7:7:266:0:0:0,-2.10721,-10 0/0:87.0005:21:21:788:0:0:0,-6.32163,-10 0/0:68.9393:15:15:564:0:0:0,-4.51545,-10 0/0:47.8672:8:8:290:0:0:0,-2.40824,-10 0/0:77.9702:18:18:610:0:0:0,-5.41854,-10 0/0:99:33:33:1192:0:0:0,-9.93399,-10 0/0:99:29:29:1021:0:0:0,-8.72987,-10 scaffold_6 9459938 . A G 516.044 . AB=0.724138;ABP=15.6647;AC=1;AF=0.00543478;AN=184;AO=21;CIGAR=1X;DP=1527;DPB=1527;DPRA=1.76168;EPP=3.1137;EPPR=5.43571;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9608;NS=92;NUMALT=1;ODDS=3.06435;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=771;QR=55409;RO=1505;RPP=48.6112;RPPR=3271.08;RUN=1;SAF=10;SAP=3.1137;SAR=11;SRF=732;SRP=5.43571;SRR=773;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.5387:14:14:529:0:0:0,-4.21442,-10 0/0:29.4975:10:10:352:0:0:0,-3.0103,-10 0/0:71.6417:24:24:897:0:0:0,-7.22472,-10 0/0:41.5387:14:14:496:0:0:0,-4.21442,-10 0/0:44.549:15:15:541:0:0:0,-4.51545,-10 0/0:41.5387:14:14:519:0:0:0,-4.21442,-10 0/0:92.7133:31:31:1120:0:0:0,-9.33193,-10 0/0:86.6931:29:29:1093:0:0:0,-8.72987,-10 0/0:32.5078:11:11:415:0:0:0,-3.31133,-10 0/0:14.446:5:5:190:0:0:0,-1.50515,-10 0/0:26.4872:9:9:342:0:0:0,-2.70927,-10 0/0:26.4872:9:9:341:0:0:0,-2.70927,-10 0/0:86.6931:29:29:1053:0:0:0,-8.72987,-10 0/0:59.6005:21:20:751:0:0:0,-6.0206,-10 0/0:83.6828:28:28:1045:0:0:0,-8.42884,-10 0/0:77.6623:26:26:969:0:0:0,-7.82678,-10 0/0:53.5799:18:18:653:0:0:0,-5.41854,-10 0/0:47.5593:16:16:567:0:0:0,-4.81648,-10 0/0:62.6108:21:21:740:0:0:0,-6.32163,-10 0/1:99:29:8:297:21:771:-10,0,-10 0/0:62.6108:21:21:772:0:0:0,-6.32163,-10 0/0:59.6005:20:20:756:0:0:0,-6.0206,-10 0/0:20.4666:7:7:264:0:0:0,-2.10721,-10 0/0:47.5593:16:16:603:0:0:0,-4.81648,-10 0/0:35.5181:12:12:451:0:0:0,-3.61236,-10 0/0:62.6108:21:21:762:0:0:0,-6.32163,-10 0/0:47.5593:16:16:601:0:0:0,-4.81648,-10 0/0:29.4975:10:10:377:0:0:0,-3.0103,-10 0/0:38.5284:13:13:478:0:0:0,-3.91339,-10 0/0:92.7133:31:31:1152:0:0:0,-9.33193,-10 0/0:32.5078:11:11:417:0:0:0,-3.31133,-10 0/0:17.4563:6:6:228:0:0:0,-1.80618,-10 0/0:50.5696:17:17:623:0:0:0,-5.11751,-10 0/0:14.446:5:5:190:0:0:0,-1.50515,-10 0/0:74.652:25:25:905:0:0:0,-7.52575,-10 0/0:20.4666:7:7:254:0:0:0,-2.10721,-10 0/0:17.4563:6:6:227:0:0:0,-1.80618,-10 0/0:86.6931:29:29:1097:0:0:0,-8.72987,-10 0/0:29.4975:10:10:376:0:0:0,-3.0103,-10 0/0:38.5284:13:13:467:0:0:0,-3.91339,-10 0/0:62.6108:21:21:761:0:0:0,-6.32163,-10 0/0:23.4769:8:8:303:0:0:0,-2.40824,-10 0/0:41.5387:14:14:527:0:0:0,-4.21442,-10 0/0:74.652:25:25:923:0:0:0,-7.52575,-10 0/0:26.4872:9:9:342:0:0:0,-2.70927,-10 0/0:41.5387:14:14:527:0:0:0,-4.21442,-10 0/0:83.6828:28:28:1039:0:0:0,-8.42884,-10 0/0:59.6005:20:20:752:0:0:0,-6.0206,-10 0/0:32.5078:11:11:409:0:0:0,-3.31133,-10 0/0:83.6828:28:28:1022:0:0:0,-8.42884,-10 0/0:29.4975:10:10:377:0:0:0,-3.0103,-10 0/0:65.6211:22:22:814:0:0:0,-6.62266,-10 0/0:38.5284:13:13:492:0:0:0,-3.91339,-10 0/0:26.4872:9:9:325:0:0:0,-2.70927,-10 0/0:77.6623:26:26:932:0:0:0,-7.82678,-10 0/0:26.4872:9:9:340:0:0:0,-2.70927,-10 0/0:26.4872:9:9:319:0:0:0,-2.70927,-10 0/0:35.5181:12:12:430:0:0:0,-3.61236,-10 0/0:26.4872:9:9:328:0:0:0,-2.70927,-10 0/0:23.4769:8:8:276:0:0:0,-2.40824,-10 0/0:92.7133:31:31:1154:0:0:0,-9.33193,-10 0/0:47.5593:16:16:584:0:0:0,-4.81648,-10 0/0:68.6314:23:23:872:0:0:0,-6.92369,-10 0/0:41.5387:14:14:520:0:0:0,-4.21442,-10 0/0:53.5799:18:18:634:0:0:0,-5.41854,-10 0/0:77.6623:26:26:944:0:0:0,-7.82678,-10 0/0:53.5799:18:18:647:0:0:0,-5.41854,-10 0/0:29.4975:10:10:350:0:0:0,-3.0103,-10 0/0:89.7032:30:30:1113:0:0:0,-9.0309,-10 0/0:14.446:5:5:163:0:0:0,-1.50515,-10 0/0:44.549:15:15:544:0:0:0,-4.51545,-10 0/0:59.6005:20:20:728:0:0:0,-6.0206,-10 0/0:74.652:25:25:937:0:0:0,-7.52575,-10 0/0:59.6005:20:20:753:0:0:0,-6.0206,-10 0/0:83.6828:28:28:1030:0:0:0,-8.42884,-10 0/0:44.549:15:15:570:0:0:0,-4.51545,-10 0/0:50.5696:17:17:621:0:0:0,-5.11751,-10 0/0:29.4975:10:10:379:0:0:0,-3.0103,-10 0/0:20.4666:7:7:251:0:0:0,-2.10721,-10 0/0:29.4975:10:10:355:0:0:0,-3.0103,-10 0/0:77.6623:26:26:946:0:0:0,-7.82678,-10 0/0:59.6005:20:20:721:0:0:0,-6.0206,-10 0/0:29.4975:10:10:346:0:0:0,-3.0103,-10 0/0:65.6211:22:22:832:0:0:0,-6.62266,-10 0/0:47.5593:16:16:593:0:0:0,-4.81648,-10 0/0:17.4563:6:6:203:0:0:0,-1.80618,-10 0/0:56.5902:19:19:700:0:0:0,-5.71957,-10 0/0:35.5181:12:12:446:0:0:0,-3.61236,-10 0/0:23.4769:8:8:282:0:0:0,-2.40824,-10 0/0:71.6417:24:24:883:0:0:0,-7.22472,-10 0/0:53.5799:18:18:673:0:0:0,-5.41854,-10 0/0:41.5387:14:14:487:0:0:0,-4.21442,-10 scaffold_6 9512346 . G C 286.285 . AB=0.722222;ABP=10.7311;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1806;DPB=1806;DPRA=0.916107;EPP=7.18621;EPPR=3.01515;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=9.47803;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=458;QR=64403;RO=1790;RPP=31.2394;RPPR=3889.95;RUN=1;SAF=9;SAP=7.18621;SAR=4;SRF=894;SRP=3.01515;SRR=896;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:28:28:956:0:0:0,-8.42884,-10 0/0:86.3178:19:19:713:0:0:0,-5.71957,-10 0/0:89.3278:20:20:737:0:0:0,-6.0206,-10 0/0:71.2666:14:14:508:0:0:0,-4.21442,-10 0/0:71.2666:14:14:512:0:0:0,-4.21442,-10 0/0:62.2357:11:11:363:0:0:0,-3.31133,-10 0/0:99:40:40:1397:0:0:0,-10,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:71.2666:14:14:503:0:0:0,-4.21442,-10 0/0:53.2048:8:8:296:0:0:0,-2.40824,-10 0/0:53.2048:8:8:268:0:0:0,-2.40824,-10 0/0:62.2357:11:11:410:0:0:0,-3.31133,-10 0/0:99:39:39:1448:0:0:0,-10,-10 0/0:99:25:25:908:0:0:0,-7.52575,-10 0/0:99:25:24:855:0:0:0,-7.22472,-10 0/0:99:27:27:968:0:0:0,-8.12781,-10 0/0:86.3178:19:19:674:0:0:0,-5.71957,-10 0/0:56.2151:9:9:325:0:0:0,-2.70927,-10 0/0:83.3076:18:18:636:0:0:0,-5.41854,-10 0/0:99:47:47:1696:0:0:0,-10,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:99:25:25:895:0:0:0,-7.52575,-10 0/0:53.2048:8:8:300:0:0:0,-2.40824,-10 0/0:99:29:29:1044:0:0:0,-8.72987,-10 0/0:89.3278:20:20:708:0:0:0,-6.0206,-10 0/0:95.3466:22:22:764:0:0:0,-6.62266,-10 0/0:99:24:24:871:0:0:0,-7.22472,-10 0/0:95.3466:22:22:793:0:0:0,-6.62266,-10 0/0:62.2357:11:11:416:0:0:0,-3.31133,-10 0/0:99:34:34:1245:0:0:0,-10,-10 0/0:47.1842:6:6:218:0:0:0,-1.80618,-10 0/0:41.1636:4:4:143:0:0:0,-1.20412,-10 0/0:56.2151:9:9:292:0:0:0,-2.70927,-10 0/0:65.246:12:12:398:0:0:0,-3.61236,-10 0/0:98.3545:23:23:857:0:0:0,-6.92369,-10 0/0:56.2151:9:9:342:0:0:0,-2.70927,-10 0/0:50.1945:7:7:258:0:0:0,-2.10721,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:99:27:27:964:0:0:0,-8.12781,-10 0/0:53.2048:8:8:278:0:0:0,-2.40824,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:74.2769:15:15:517:0:0:0,-4.51545,-10 0/0:71.2666:14:14:503:0:0:0,-4.21442,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:99:24:24:902:0:0:0,-7.22472,-10 0/0:71.2666:14:14:516:0:0:0,-4.21442,-10 0/0:99:39:39:1372:0:0:0,-10,-10 0/0:89.3278:20:20:725:0:0:0,-6.0206,-10 0/0:50.1945:7:7:244:0:0:0,-2.10721,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:65.246:12:12:430:0:0:0,-3.61236,-10 0/0:98.3545:23:23:804:0:0:0,-6.92369,-10 0/0:62.2357:11:11:408:0:0:0,-3.31133,-10 0/0:71.2666:14:14:514:0:0:0,-4.21442,-10 0/0:99:31:31:1120:0:0:0,-9.33193,-10 0/0:62.2357:11:11:415:0:0:0,-3.31133,-10 0/0:99:25:25:899:0:0:0,-7.52575,-10 0/0:68.2563:13:13:486:0:0:0,-3.91339,-10 0/0:77.2871:16:16:589:0:0:0,-4.81648,-10 0/0:56.2151:9:9:341:0:0:0,-2.70927,-10 0/0:99:29:29:1043:0:0:0,-8.72987,-10 0/0:62.2357:11:11:386:0:0:0,-3.31133,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:77.2871:16:16:571:0:0:0,-4.81648,-10 0/0:89.3278:20:20:729:0:0:0,-6.0206,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:99:26:26:889:0:0:0,-7.82678,-10 0/0:65.246:12:12:450:0:0:0,-3.61236,-10 0/0:99:38:37:1305:0:0:0,-10,-10 0/0:62.2357:11:11:392:0:0:0,-3.31133,-10 0/0:74.2769:15:15:560:0:0:0,-4.51545,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/1:99:18:5:170:13:458:-10,0,-10 0/0:77.2871:16:16:568:0:0:0,-4.81648,-10 0/0:98.3545:23:23:826:0:0:0,-6.92369,-10 0/0:77.2871:16:16:584:0:0:0,-4.81648,-10 0/0:71.2666:14:14:523:0:0:0,-4.21442,-10 0/0:71.2666:14:14:488:0:0:0,-4.21442,-10 0/0:41.1636:4:4:152:0:0:0,-1.20412,-10 0/0:65.246:12:12:446:0:0:0,-3.61236,-10 0/0:99:41:41:1494:0:0:0,-10,-10 0/0:99:29:29:1028:0:0:0,-8.72987,-10 0/0:95.3466:22:22:783:0:0:0,-6.62266,-10 0/0:80.2975:17:17:631:0:0:0,-5.11751,-10 0/0:77.2871:16:16:520:0:0:0,-4.81648,-10 0/0:80.2975:17:17:637:0:0:0,-5.11751,-10 0/0:80.2975:17:17:633:0:0:0,-5.11751,-10 0/0:53.2048:8:8:245:0:0:0,-2.40824,-10 0/0:71.2666:14:14:504:0:0:0,-4.21442,-10 0/0:99:25:25:857:0:0:0,-7.52575,-10 0/0:99:25:25:927:0:0:0,-7.52575,-10 0/0:99:26:25:798:0:0:0,-7.52575,-10 scaffold_6 9759925 . G A 75.398 . AB=0.384615;ABP=4.51363;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1968;DPB=1968;DPRA=1.47939;EPP=9.04217;EPPR=3.22789;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9453;NS=92;NUMALT=1;ODDS=15.2397;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=274;QR=70474;RO=1956;RPP=22.5536;RPPR=4172.6;RUN=1;SAF=2;SAP=9.04217;SAR=7;SRF=986;SRP=3.2945;SRR=970;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:96.2853:13:13:459:0:0:0,-3.91339,-10 0/0:93.2763:12:12:420:0:0:0,-3.61236,-10 0/0:99:26:25:870:0:0:0,-7.52575,-10 0/0:96.2853:13:13:489:0:0:0,-3.91339,-10 0/0:99:19:19:690:0:0:0,-5.71957,-10 0/0:93.2763:12:12:448:0:0:0,-3.61236,-10 0/0:99:40:40:1419:0:0:0,-10,-10 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:99:17:17:626:0:0:0,-5.11751,-10 0/0:81.2364:8:8:280:0:0:0,-2.40824,-10 0/0:93.2763:12:12:452:0:0:0,-3.61236,-10 0/0:72.2056:5:5:184:0:0:0,-1.50515,-10 0/0:99:35:35:1231:0:0:0,-10,-10 0/0:99:38:37:1350:1:16:0,-8.25936,-10 0/0:99:47:47:1700:0:0:0,-10,-10 0/0:93.2763:12:12:441:0:0:0,-3.61236,-10 0/0:99:25:25:904:0:0:0,-7.52575,-10 0/0:93.2763:12:12:416:0:0:0,-3.61236,-10 0/0:99:15:15:561:0:0:0,-4.51545,-10 0/0:99:50:50:1829:0:0:0,-10,-10 0/0:99:18:18:674:0:0:0,-5.41854,-10 0/0:99:41:41:1473:0:0:0,-10,-10 0/0:96.2853:13:13:478:0:0:0,-3.91339,-10 0/0:99:31:31:1160:0:0:0,-9.33193,-10 0/0:99:15:15:479:0:0:0,-4.51545,-10 0/0:99:20:20:728:0:0:0,-6.0206,-10 0/0:99:16:16:604:0:0:0,-4.81648,-10 0/0:87.2573:10:10:370:0:0:0,-3.0103,-10 0/0:99:18:18:673:0:0:0,-5.41854,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/0:66.185:3:3:112:0:0:0,-0.90309,-10 0/0:99:16:16:600:0:0:0,-4.81648,-10 0/0:99:19:19:673:0:0:0,-5.71957,-10 0/0:96.2853:13:13:488:0:0:0,-3.91339,-10 0/0:99:26:26:956:0:0:0,-7.82678,-10 0/0:81.2364:8:8:303:0:0:0,-2.40824,-10 0/0:99:19:18:642:0:0:0,-5.41854,-10 0/0:99:30:30:1041:0:0:0,-9.0309,-10 0/0:99:21:21:753:0:0:0,-6.32163,-10 0/0:99:14:14:486:0:0:0,-4.21442,-10 0/0:84.6944:26:24:887:2:32:0,-2.2749,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:99:20:20:677:0:0:0,-6.0206,-10 0/0:99:30:30:1094:0:0:0,-9.0309,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:99:20:20:727:0:0:0,-6.0206,-10 0/0:99:47:46:1652:1:38:0,-8.67631,-10 0/0:99:36:36:1261:0:0:0,-10,-10 0/0:99:20:20:738:0:0:0,-6.0206,-10 0/0:99:41:41:1442:0:0:0,-10,-10 0/0:93.2763:12:12:415:0:0:0,-3.61236,-10 0/0:99:40:40:1426:0:0:0,-10,-10 0/0:99:22:22:780:0:0:0,-6.62266,-10 0/0:93.2763:12:12:437:0:0:0,-3.61236,-10 0/0:99:53:53:1956:0:0:0,-10,-10 0/0:99:15:15:524:0:0:0,-4.51545,-10 0/0:99:32:32:1155:0:0:0,-9.63296,-10 0/0:75.2159:6:6:224:0:0:0,-1.80618,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:99:15:15:558:0:0:0,-4.51545,-10 0/0:99:32:31:1154:0:0:0,-9.33193,-10 0/0:99:14:14:514:0:0:0,-4.21442,-10 0/0:99:29:29:1095:0:0:0,-8.72987,-10 0/1:75.398:13:8:304:5:188:-10,0,-10 0/0:78.2261:7:7:233:0:0:0,-2.10721,-10 0/0:99:28:28:992:0:0:0,-8.42884,-10 0/0:99:21:21:751:0:0:0,-6.32163,-10 0/0:81.2364:8:8:303:0:0:0,-2.40824,-10 0/0:99:38:38:1297:0:0:0,-10,-10 0/0:96.2853:13:13:459:0:0:0,-3.91339,-10 0/0:99:25:25:927:0:0:0,-7.52575,-10 0/0:99:21:21:743:0:0:0,-6.32163,-10 0/0:99:23:23:781:0:0:0,-6.92369,-10 0/0:99:16:16:587:0:0:0,-4.81648,-10 0/0:99:34:34:1232:0:0:0,-10,-10 0/0:81.2364:8:8:298:0:0:0,-2.40824,-10 0/0:99:17:17:565:0:0:0,-5.11751,-10 0/0:99:15:15:548:0:0:0,-4.51545,-10 0/0:69.1953:4:4:152:0:0:0,-1.20412,-10 0/0:81.2364:8:8:275:0:0:0,-2.40824,-10 0/0:99:34:34:1195:0:0:0,-10,-10 0/0:99:35:35:1169:0:0:0,-10,-10 0/0:99:21:21:767:0:0:0,-6.32163,-10 0/0:99:29:29:993:0:0:0,-8.72987,-10 0/0:99:28:28:1021:0:0:0,-8.42884,-10 0/0:72.2056:5:5:188:0:0:0,-1.50515,-10 0/0:99:15:15:560:0:0:0,-4.51545,-10 0/0:99:17:17:616:0:0:0,-5.11751,-10 0/0:69.1953:4:4:152:0:0:0,-1.20412,-10 0/0:99:16:16:572:0:0:0,-4.81648,-10 0/0:99:21:21:755:0:0:0,-6.32163,-10 0/0:99:16:16:554:0:0:0,-4.81648,-10 scaffold_6 9859908 . G A 581.492 . AB=0.581395;ABP=5.48477;AC=2;AF=0.0108696;AN=184;AO=25;CIGAR=1X;DP=1736;DPB=1736;DPRA=1.14294;EPP=3.79203;EPPR=6.57944;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9549;NS=92;NUMALT=1;ODDS=2.93659;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=920;QR=61803;RO=1709;RPP=57.2971;RPPR=3714.06;RUN=1;SAF=14;SAP=3.79203;SAR=11;SRF=828;SRP=6.57944;SRR=881;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:67.9468:16:16:599:0:0:0,-4.81648,-10 0/0:37.8438:6:6:216:0:0:0,-1.80618,-10 0/0:99:32:32:1153:0:0:0,-9.63296,-10 0/0:58.9159:13:13:484:0:0:0,-3.91339,-10 0/0:49.885:10:10:364:0:0:0,-3.0103,-10 0/0:49.885:10:10:360:0:0:0,-3.0103,-10 0/0:99:37:37:1308:0:0:0,-10,-10 0/0:99:28:28:1047:0:0:0,-8.42884,-10 0/0:73.9674:18:18:584:0:0:0,-5.41854,-10 0/0:31.8232:4:4:148:0:0:0,-1.20412,-10 0/0:37.8438:6:6:216:0:0:0,-1.80618,-10 0/0:31.8232:4:4:134:0:0:0,-1.20412,-10 0/0:99:31:31:1075:0:0:0,-9.33193,-10 0/0:99:29:29:1022:0:0:0,-8.72987,-10 0/0:98.0455:26:26:981:0:0:0,-7.82678,-10 0/0:92.0282:24:24:833:0:0:0,-7.22472,-10 0/0:73.9674:18:18:622:0:0:0,-5.41854,-10 0/0:43.8644:8:8:297:0:0:0,-2.40824,-10 0/0:86.0084:22:22:820:0:0:0,-6.62266,-10 0/0:99:32:31:1165:0:0:0,-9.33193,-10 0/0:89.0184:23:23:832:0:0:0,-6.92369,-10 0/0:99:29:29:1046:0:0:0,-8.72987,-10 0/0:43.8644:8:8:291:0:0:0,-2.40824,-10 0/0:89.0184:23:23:852:0:0:0,-6.92369,-10 0/0:73.9674:18:18:635:0:0:0,-5.41854,-10 0/0:76.9777:19:19:706:0:0:0,-5.71957,-10 0/0:67.9468:16:16:569:0:0:0,-4.81648,-10 0/0:61.9262:14:14:505:0:0:0,-4.21442,-10 0/0:76.9777:19:19:700:0:0:0,-5.71957,-10 0/0:99:27:27:958:0:0:0,-8.12781,-10 0/0:43.8644:8:8:268:0:0:0,-2.40824,-10 0/0:46.8747:9:9:333:0:0:0,-2.70927,-10 0/0:64.9365:15:15:539:0:0:0,-4.51545,-10 0/0:40.8541:7:7:266:0:0:0,-2.10721,-10 0/0:64.9365:15:15:558:0:0:0,-4.51545,-10 0/0:34.8335:5:5:190:0:0:0,-1.50515,-10 0/0:49.885:10:10:342:0:0:0,-3.0103,-10 0/0:99:30:30:1063:0:0:0,-9.0309,-10 0/0:64.9365:15:15:565:0:0:0,-4.51545,-10 0/0:67.9468:16:16:599:0:0:0,-4.81648,-10 0/0:70.9571:17:17:552:0:0:0,-5.11751,-10 0/0:61.9262:14:14:522:0:0:0,-4.21442,-10 0/0:76.9777:19:19:715:0:0:0,-5.71957,-10 0/0:99:32:32:1117:0:0:0,-9.63296,-10 0/0:79.988:20:20:733:0:0:0,-6.0206,-10 0/0:76.9777:19:19:715:0:0:0,-5.71957,-10 0/0:99:39:39:1394:0:0:0,-10,-10 0/0:98.0455:26:26:913:0:0:0,-7.82678,-10 0/0:43.8644:8:8:301:0:0:0,-2.40824,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:46.8747:9:9:331:0:0:0,-2.70927,-10 0/0:99:32:32:1163:0:0:0,-9.63296,-10 0/0:43.8644:8:8:275:0:0:0,-2.40824,-10 0/0:37.8438:6:6:224:0:0:0,-1.80618,-10 0/0:99:46:46:1667:0:0:0,-10,-10 0/0:92.0282:24:24:901:0:0:0,-7.22472,-10 0/0:89.0184:23:23:870:0:0:0,-6.92369,-10 0/0:52.8953:11:11:414:0:0:0,-3.31133,-10 0/0:70.9571:17:17:637:0:0:0,-5.11751,-10 0/0:67.9468:16:16:572:0:0:0,-4.81648,-10 0/0:99:34:34:1260:0:0:0,-10,-10 0/0:98.0455:26:26:948:0:0:0,-7.82678,-10 0/0:99:38:38:1369:0:0:0,-10,-10 0/0:64.9365:15:15:561:0:0:0,-4.51545,-10 0/0:52.8953:11:11:405:0:0:0,-3.31133,-10 0/0:99:45:45:1637:0:0:0,-10,-10 0/0:86.0084:22:22:759:0:0:0,-6.62266,-10 0/0:49.885:10:10:364:0:0:0,-3.0103,-10 0/0:95.0374:25:25:858:0:0:0,-7.52575,-10 0/0:43.8644:8:8:291:0:0:0,-2.40824,-10 0/0:82.9984:21:21:762:0:0:0,-6.32163,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:86.0084:22:22:806:0:0:0,-6.62266,-10 0/1:0.22371:19:0:0:19:692:-10,-5.71957,0 0/1:99:24:18:651:6:228:-10,0,-10 0/0:64.9365:15:15:542:0:0:0,-4.51545,-10 0/0:67.9468:16:16:571:0:0:0,-4.81648,-10 0/0:55.9056:12:12:424:0:0:0,-3.61236,-10 0/0:34.8335:5:5:136:0:0:0,-1.50515,-10 0/0:49.885:10:10:342:0:0:0,-3.0103,-10 0/0:99:29:29:1044:0:0:0,-8.72987,-10 0/0:61.9262:14:14:528:0:0:0,-4.21442,-10 0/0:86.0084:23:22:790:0:0:0,-6.62266,-10 0/0:98.0455:26:26:917:0:0:0,-7.82678,-10 0/0:79.988:20:20:748:0:0:0,-6.0206,-10 0/0:40.8541:7:7:244:0:0:0,-2.10721,-10 0/0:79.988:20:20:703:0:0:0,-6.0206,-10 0/0:79.988:20:20:726:0:0:0,-6.0206,-10 0/0:34.8335:5:5:186:0:0:0,-1.50515,-10 0/0:70.9571:17:17:615:0:0:0,-5.11751,-10 0/0:79.988:20:20:747:0:0:0,-6.0206,-10 0/0:52.8953:11:11:417:0:0:0,-3.31133,-10 scaffold_6 9900764 . C G 760.841 . AB=0.484848;ABP=3.1419;AC=3;AF=0.0163043;AN=184;AO=33;CIGAR=1X;DP=1321;DPB=1321;DPRA=1.36174;EPP=3.0761;EPPR=3.1182;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9899;NS=92;NUMALT=1;ODDS=3.44399;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1142;QR=47085;RO=1288;RPP=74.6689;RPPR=2799.87;RUN=1;SAF=16;SAP=3.0761;SAR=17;SRF=640;SRP=3.1182;SRR=648;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.3765:12:12:418:0:0:0,-3.61236,-10 0/0:33.325:7:7:266:0:0:0,-2.10721,-10 0/0:66.4383:18:18:680:0:0:0,-5.41854,-10 0/0:36.3353:8:8:280:0:0:0,-2.40824,-10 0/0:39.3456:9:9:341:0:0:0,-2.70927,-10 0/0:33.325:7:7:262:0:0:0,-2.10721,-10 0/0:63.428:17:17:646:0:0:0,-5.11751,-10 0/0:60.4177:16:16:546:0:0:0,-4.81648,-10 0/0:51.3868:13:13:483:0:0:0,-3.91339,-10 0/0:21.2838:3:3:113:0:0:0,-0.90309,-10 0/0:30.3147:6:6:216:0:0:0,-1.80618,-10 0/0:18.2735:2:2:76:0:0:0,-0.60206,-7.22 0/0:84.4999:24:24:896:0:0:0,-7.22472,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:72.4589:20:20:639:0:0:0,-6.0206,-10 0/0:63.428:17:17:600:0:0:0,-5.11751,-10 0/0:54.3971:14:14:531:0:0:0,-4.21442,-10 0/0:36.3353:8:8:300:0:0:0,-2.40824,-10 0/0:69.4486:19:19:687:0:0:0,-5.71957,-10 0/0:87.5104:25:25:945:0:0:0,-7.52575,-10 0/0:57.4074:15:15:467:0:0:0,-4.51545,-10 0/0:66.4383:18:18:650:0:0:0,-5.41854,-10 0/0:42.3559:10:10:335:0:0:0,-3.0103,-10 0/0:48.3765:12:12:430:0:0:0,-3.61236,-10 0/0:48.3765:12:12:452:0:0:0,-3.61236,-10 0/0:72.4589:20:20:750:0:0:0,-6.0206,-10 0/0:51.3868:13:13:475:0:0:0,-3.91339,-10 0/0:39.3456:9:9:342:0:0:0,-2.70927,-10 0/0:45.3662:11:11:401:0:0:0,-3.31133,-10 0/0:72.4589:20:20:758:0:0:0,-6.0206,-10 0/0:39.3456:9:9:342:0:0:0,-2.70927,-10 0/0:33.325:7:7:265:0:0:0,-2.10721,-10 0/0:66.4383:18:18:674:0:0:0,-5.41854,-10 0/0:42.3559:10:10:344:0:0:0,-3.0103,-10 0/0:81.4897:23:23:857:0:0:0,-6.92369,-10 0/0:30.3147:6:6:201:0:0:0,-1.80618,-10 0/0:60.4177:16:16:584:0:0:0,-4.81648,-10 0/0:63.428:17:17:628:0:0:0,-5.11751,-10 0/0:42.3559:10:10:380:0:0:0,-3.0103,-10 0/0:33.325:7:7:262:0:0:0,-2.10721,-10 0/0:87.5104:25:25:885:0:0:0,-7.52575,-10 0/0:48.3765:12:12:427:0:0:0,-3.61236,-10 0/0:42.3559:10:10:371:0:0:0,-3.0103,-10 0/0:63.428:17:17:646:0:0:0,-5.11751,-10 0/0:72.4589:20:20:745:0:0:0,-6.0206,-10 0/1:92.0878:8:4:152:4:128:-10,0,-10 0/1:99:27:9:334:18:635:-10,0,-10 0/0:66.4383:18:18:678:0:0:0,-5.41854,-10 0/0:36.3353:8:8:303:0:0:0,-2.40824,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:60.4177:16:16:603:0:0:0,-4.81648,-10 0/0:96.5412:28:28:1014:0:0:0,-8.42884,-10 0/0:36.3353:8:8:289:0:0:0,-2.40824,-10 0/0:27.3044:5:5:190:0:0:0,-1.50515,-10 0/1:99:31:21:754:10:363:-10,0,-10 0/0:60.4177:16:16:595:0:0:0,-4.81648,-10 0/0:69.4486:19:19:688:0:0:0,-5.71957,-10 0/0:36.3353:8:8:279:0:0:0,-2.40824,-10 0/0:63.428:17:17:630:0:0:0,-5.11751,-10 0/0:48.3765:12:12:453:0:0:0,-3.61236,-10 0/0:99:33:33:1250:0:0:0,-9.93399,-10 0/0:48.3765:12:12:395:0:0:0,-3.61236,-10 0/0:69.4486:19:19:704:0:0:0,-5.71957,-10 0/0:63.428:17:17:636:0:0:0,-5.11751,-10 0/0:33.325:7:7:260:0:0:0,-2.10721,-10 0/0:78.4795:22:22:772:0:0:0,-6.62266,-10 0/0:69.4486:19:19:713:0:0:0,-5.71957,-10 0/0:36.3353:8:8:256:0:0:0,-2.40824,-10 0/0:63.428:17:17:622:0:0:0,-5.11751,-10 0/0:22.299:11:10:357:1:16:0,-0.669937,-10 0/0:33.325:7:7:266:0:0:0,-2.10721,-10 0/0:78.4795:22:22:795:0:0:0,-6.62266,-10 0/0:57.4074:15:15:566:0:0:0,-4.51545,-10 0/0:48.3765:12:12:445:0:0:0,-3.61236,-10 0/0:93.5298:27:27:991:0:0:0,-8.12781,-10 0/0:48.3765:12:12:452:0:0:0,-3.61236,-10 0/0:42.3559:10:10:380:0:0:0,-3.0103,-10 0/0:39.3456:9:9:320:0:0:0,-2.70927,-10 0/0:15.2632:1:1:38:0:0:0,-0.30103,-3.8 0/0:39.3456:9:9:332:0:0:0,-2.70927,-10 0/0:72.4589:20:20:701:0:0:0,-6.0206,-10 0/0:84.4999:24:24:885:0:0:0,-7.22472,-10 0/0:60.4177:16:16:589:0:0:0,-4.81648,-10 0/0:45.3662:11:11:408:0:0:0,-3.31133,-10 0/0:51.3868:13:13:435:0:0:0,-3.91339,-10 0/0:36.3353:8:8:304:0:0:0,-2.40824,-10 0/0:45.3662:11:11:418:0:0:0,-3.31133,-10 0/0:36.3353:8:8:290:0:0:0,-2.40824,-10 0/0:33.325:7:7:244:0:0:0,-2.10721,-10 0/0:60.4177:16:16:594:0:0:0,-4.81648,-10 0/0:48.3765:12:12:415:0:0:0,-3.61236,-10 0/0:39.3456:9:9:317:0:0:0,-2.70927,-10 scaffold_6 9900811 . G A 600.721 . AB=0.684211;ABP=14.2105;AC=3;AF=0.0163043;AN=184;AO=26;CIGAR=1X;DP=1334;DPB=1334;DPRA=0.869856;EPP=3.0103;EPPR=3.0103;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.99;NS=92;NUMALT=1;ODDS=5.26981;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=923;QR=47916;RO=1306;RPP=59.4686;RPPR=2676.32;RUN=1;SAF=13;SAP=3.0103;SAR=13;SRF=634;SRP=5.41122;SRR=672;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.0475:12:12:372:0:0:0,-3.61236,-10 0/0:40.996:7:7:265:0:0:0,-2.10721,-10 0/0:74.1093:18:18:674:0:0:0,-5.41854,-10 0/0:44.0063:8:8:302:0:0:0,-2.40824,-10 0/0:47.0166:9:9:340:0:0:0,-2.70927,-10 0/0:40.996:7:7:266:0:0:0,-2.10721,-10 0/0:71.099:17:17:642:0:0:0,-5.11751,-10 0/0:68.0887:16:16:551:0:0:0,-4.81648,-10 0/0:59.0578:13:13:490:0:0:0,-3.91339,-10 0/0:28.9548:3:3:111:0:0:0,-0.90309,-10 0/0:37.9857:6:6:225:0:0:0,-1.80618,-10 0/0:25.9445:2:2:76:0:0:0,-0.60206,-7.22 0/0:92.1704:24:24:897:0:0:0,-7.22472,-10 0/0:99:33:33:1231:0:0:0,-9.93399,-10 0/0:80.1299:20:20:725:0:0:0,-6.0206,-10 0/1:99:17:7:253:10:333:-10,0,-10 0/0:62.0681:14:14:528:0:0:0,-4.21442,-10 0/0:44.0063:8:8:300:0:0:0,-2.40824,-10 0/0:77.1196:19:19:706:0:0:0,-5.71957,-10 0/0:98.1921:26:26:983:0:0:0,-7.82678,-10 0/0:65.0784:15:15:516:0:0:0,-4.51545,-10 0/0:74.1093:18:18:679:0:0:0,-5.41854,-10 0/0:50.0269:10:10:378:0:0:0,-3.0103,-10 0/1:99:12:5:167:7:256:-10,0,-10 0/0:56.0475:12:12:441:0:0:0,-3.61236,-10 0/0:80.1299:20:20:721:0:0:0,-6.0206,-10 0/0:59.0578:13:13:471:0:0:0,-3.91339,-10 0/0:47.0166:9:9:341:0:0:0,-2.70927,-10 0/0:56.0475:12:12:456:0:0:0,-3.61236,-10 0/0:80.1299:20:20:686:0:0:0,-6.0206,-10 0/0:47.0166:9:9:328:0:0:0,-2.70927,-10 0/0:40.996:7:7:266:0:0:0,-2.10721,-10 0/0:74.1093:18:18:661:0:0:0,-5.41854,-10 0/0:50.0269:10:10:366:0:0:0,-3.0103,-10 0/0:92.1704:24:24:873:0:0:0,-7.22472,-10 0/0:37.9857:6:6:228:0:0:0,-1.80618,-10 0/0:68.0887:16:16:582:0:0:0,-4.81648,-10 0/0:71.099:17:17:615:0:0:0,-5.11751,-10 0/1:0.000838415:9:0:0:9:334:-10,-2.70927,0 0/0:37.9857:7:6:228:0:0:0,-1.80618,-10 0/0:95.1816:25:25:890:0:0:0,-7.52575,-10 0/0:56.0475:12:12:422:0:0:0,-3.61236,-10 0/0:50.0269:10:10:377:0:0:0,-3.0103,-10 0/0:71.099:17:17:630:0:0:0,-5.11751,-10 0/0:80.1299:20:20:752:0:0:0,-6.0206,-10 0/0:44.0063:8:8:281:0:0:0,-2.40824,-10 0/0:99:29:28:988:0:0:0,-8.42884,-10 0/0:74.1093:18:18:647:0:0:0,-5.41854,-10 0/0:44.0063:8:8:302:0:0:0,-2.40824,-10 0/0:99:31:31:1119:0:0:0,-9.33193,-10 0/0:68.0887:16:16:601:0:0:0,-4.81648,-10 0/0:99:29:29:1082:0:0:0,-8.72987,-10 0/0:44.0063:8:8:303:0:0:0,-2.40824,-10 0/0:34.9754:5:5:185:0:0:0,-1.50515,-10 0/0:99:32:32:1161:0:0:0,-9.63296,-10 0/0:68.0887:16:16:596:0:0:0,-4.81648,-10 0/0:77.1196:19:19:691:0:0:0,-5.71957,-10 0/0:44.0063:8:8:293:0:0:0,-2.40824,-10 0/0:71.099:17:17:639:0:0:0,-5.11751,-10 0/0:56.0475:12:12:450:0:0:0,-3.61236,-10 0/0:99:35:35:1304:0:0:0,-10,-10 0/0:56.0475:12:12:417:0:0:0,-3.61236,-10 0/0:77.1196:19:19:704:0:0:0,-5.71957,-10 0/0:71.099:17:17:645:0:0:0,-5.11751,-10 0/0:40.996:7:7:231:0:0:0,-2.10721,-10 0/0:89.1605:23:23:809:0:0:0,-6.92369,-10 0/0:77.1196:19:19:697:0:0:0,-5.71957,-10 0/0:44.0063:8:8:297:0:0:0,-2.40824,-10 0/0:74.1093:18:18:673:0:0:0,-5.41854,-10 0/0:53.0372:11:11:381:0:0:0,-3.31133,-10 0/0:40.996:7:7:263:0:0:0,-2.10721,-10 0/0:89.1605:23:23:831:0:0:0,-6.92369,-10 0/0:68.0887:16:16:596:0:0:0,-4.81648,-10 0/0:56.0475:12:12:452:0:0:0,-3.61236,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:56.0475:12:12:456:0:0:0,-3.61236,-10 0/0:50.0269:10:10:375:0:0:0,-3.0103,-10 0/0:47.0166:9:9:319:0:0:0,-2.70927,-10 0/0:22.9342:1:1:38:0:0:0,-0.30103,-3.8 0/0:47.0166:9:9:337:0:0:0,-2.70927,-10 0/0:83.1401:21:21:794:0:0:0,-6.32163,-10 0/0:95.1816:25:25:899:0:0:0,-7.52575,-10 0/0:68.0887:16:16:597:0:0:0,-4.81648,-10 0/0:53.0372:11:11:410:0:0:0,-3.31133,-10 0/0:59.0578:13:13:460:0:0:0,-3.91339,-10 0/0:44.0063:8:8:297:0:0:0,-2.40824,-10 0/0:50.0269:10:10:379:0:0:0,-3.0103,-10 0/0:44.0063:8:8:278:0:0:0,-2.40824,-10 0/0:40.996:7:7:263:0:0:0,-2.10721,-10 0/0:68.0887:16:16:603:0:0:0,-4.81648,-10 0/0:56.0475:12:12:439:0:0:0,-3.61236,-10 0/0:47.0166:9:9:341:0:0:0,-2.70927,-10 scaffold_6 9900828 . C A 1602.13 . AB=0.503937;ABP=3.0274;AC=8;AF=0.0434783;AN=184;AO=64;CIGAR=1X;DP=1324;DPB=1324;DPRA=1.11404;EPP=3.55317;EPPR=5.3715;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=2.49827;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2318;QR=45892;RO=1259;RPP=141.985;RPPR=2676.43;RUN=1;SAF=34;SAP=3.55317;SAR=30;SRF=604;SRP=7.4964;SRR=655;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.752:12:12:362:0:0:0,-3.61236,-10 0/0:32.7005:7:7:262:0:0:0,-2.10721,-10 0/0:65.8138:18:18:664:0:0:0,-5.41854,-10 0/0:35.7108:8:8:296:0:0:0,-2.40824,-10 0/1:35.3141:9:7:266:2:69:-5.40203,0,-10 0/0:32.7005:7:7:265:0:0:0,-2.10721,-10 0/0:62.8035:17:17:645:0:0:0,-5.11751,-10 0/1:99:16:8:270:8:299:-10,0,-10 0/0:50.7623:13:13:483:0:0:0,-3.91339,-10 0/0:20.6593:3:3:69:0:0:0,-0.90309,-6.44 0/0:29.6902:6:6:226:0:0:0,-1.80618,-10 0/0:17.649:2:2:76:0:0:0,-0.60206,-7.22 0/1:99:24:13:461:11:404:-10,0,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:71.8344:20:20:692:0:0:0,-6.0206,-10 0/0:62.8035:17:17:615:0:0:0,-5.11751,-10 0/0:53.7726:14:14:532:0:0:0,-4.21442,-10 0/0:35.7108:8:8:302:0:0:0,-2.40824,-10 0/0:68.8241:19:19:697:0:0:0,-5.71957,-10 0/0:89.8962:26:26:939:0:0:0,-7.82678,-10 0/0:56.7829:15:15:479:0:0:0,-4.51545,-10 0/0:62.8035:17:17:641:0:0:0,-5.11751,-10 0/0:41.7314:10:10:378:0:0:0,-3.0103,-10 0/0:47.752:12:12:442:0:0:0,-3.61236,-10 0/0:47.752:12:12:453:0:0:0,-3.61236,-10 0/0:71.8344:20:20:745:0:0:0,-6.0206,-10 0/0:50.7623:13:13:467:0:0:0,-3.91339,-10 0/0:38.7211:9:9:320:0:0:0,-2.70927,-10 0/0:47.752:12:12:433:0:0:0,-3.61236,-10 0/0:71.8344:20:20:747:0:0:0,-6.0206,-10 0/0:38.7211:9:9:326:0:0:0,-2.70927,-10 0/0:32.7005:7:7:266:0:0:0,-2.10721,-10 0/0:65.8138:18:18:639:0:0:0,-5.41854,-10 0/0:41.7314:10:10:373:0:0:0,-3.0103,-10 0/0:83.8755:24:24:903:0:0:0,-7.22472,-10 0/0:29.6902:6:6:205:0:0:0,-1.80618,-10 0/0:56.7829:15:15:568:0:0:0,-4.51545,-10 0/0:59.7932:17:16:601:0:0:0,-4.81648,-10 0/0:38.7211:9:9:338:0:0:0,-2.70927,-10 0/0:32.7005:7:7:260:0:0:0,-2.10721,-10 0/0:86.8859:25:25:903:0:0:0,-7.52575,-10 0/0:47.752:12:12:391:0:0:0,-3.61236,-10 0/0:41.7314:10:10:378:0:0:0,-3.0103,-10 0/0:62.8035:17:17:617:0:0:0,-5.11751,-10 0/0:71.8344:20:20:747:0:0:0,-6.0206,-10 0/0:35.7108:8:8:298:0:0:0,-2.40824,-10 0/0:95.9148:28:28:1050:0:0:0,-8.42884,-10 0/0:65.8138:18:18:660:0:0:0,-5.41854,-10 0/0:35.7108:8:8:302:0:0:0,-2.40824,-10 0/0:99:31:31:1147:0:0:0,-9.33193,-10 0/0:59.7932:16:16:580:0:0:0,-4.81648,-10 0/0:98.923:29:29:1050:0:0:0,-8.72987,-10 0/0:35.7108:8:8:298:0:0:0,-2.40824,-10 0/0:26.6799:5:5:183:0:0:0,-1.50515,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/0:56.7829:15:15:563:0:0:0,-4.51545,-10 0/0:68.8241:19:19:686:0:0:0,-5.71957,-10 0/0:35.7108:8:8:286:0:0:0,-2.40824,-10 0/0:62.8035:17:17:608:0:0:0,-5.11751,-10 0/0:47.752:12:12:453:0:0:0,-3.61236,-10 0/0:99:35:35:1280:0:0:0,-10,-10 0/0:47.752:12:12:416:0:0:0,-3.61236,-10 0/1:99:18:11:418:7:261:-10,0,-10 0/0:62.8035:17:17:632:0:0:0,-5.11751,-10 0/0:32.7005:7:7:239:0:0:0,-2.10721,-10 0/0:80.8653:23:23:826:0:0:0,-6.92369,-10 0/0:68.8241:19:19:694:0:0:0,-5.71957,-10 0/0:32.7005:7:7:264:0:0:0,-2.10721,-10 0/0:65.8138:18:18:656:0:0:0,-5.41854,-10 0/0:44.7417:11:11:378:0:0:0,-3.31133,-10 0/0:32.7005:7:7:264:0:0:0,-2.10721,-10 0/0:74.8447:21:21:776:0:0:0,-6.32163,-10 0/0:59.7932:16:16:597:0:0:0,-4.81648,-10 0/0:47.752:12:12:439:0:0:0,-3.61236,-10 0/0:89.8962:26:26:939:0:0:0,-7.82678,-10 0/0:47.752:12:12:443:0:0:0,-3.61236,-10 0/0:41.7314:10:10:364:0:0:0,-3.0103,-10 0/0:38.7211:9:9:335:0:0:0,-2.70927,-10 0/0:14.6387:1:1:38:0:0:0,-0.30103,-3.8 0/0:38.7211:9:9:338:0:0:0,-2.70927,-10 0/0:74.8447:21:21:729:0:0:0,-6.32163,-10 0/1:99:25:15:557:10:367:-10,0,-10 0/0:59.7932:16:16:578:0:0:0,-4.81648,-10 0/0:44.7417:11:11:383:0:0:0,-3.31133,-10 0/0:50.7623:13:13:468:0:0:0,-3.91339,-10 0/0:35.7108:8:8:275:0:0:0,-2.40824,-10 0/0:41.7314:10:10:380:0:0:0,-3.0103,-10 0/0:35.7108:8:8:296:0:0:0,-2.40824,-10 0/1:73.8636:7:4:142:3:110:-9.70352,0,-10 0/1:99:16:5:188:11:416:-10,0,-10 0/1:0.317534:12:0:0:12:392:-10,-3.61236,0 0/0:38.7211:9:9:335:0:0:0,-2.70927,-10 scaffold_6 9900838 . T C 78.4602 . AB=0.3;ABP=9.95901;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1X;DP=1324;DPB=1324;DPRA=1.39571;EPP=8.80089;EPPR=6.05894;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9901;NS=92;NUMALT=1;ODDS=9.65883;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=199;QR=47531;RO=1317;RPP=16.0391;RPPR=2862.84;RUN=1;SAF=1;SAP=8.80089;SAR=5;SRF=637;SRP=6.05894;SRR=680;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:75.0616:12:12:445:0:0:0,-3.61236,-10 0/0:60.0102:7:7:232:0:0:0,-2.10721,-10 0/0:93.1235:18:18:623:0:0:0,-5.41854,-10 0/0:63.0205:8:8:282:0:0:0,-2.40824,-10 0/0:66.0308:9:9:335:0:0:0,-2.70927,-10 0/0:60.0102:7:7:264:0:0:0,-2.10721,-10 0/0:90.1132:17:17:622:0:0:0,-5.11751,-10 0/0:87.1029:16:16:531:0:0:0,-4.81648,-10 0/0:78.072:13:13:489:0:0:0,-3.91339,-10 0/0:47.969:3:3:84:0:0:0,-0.90309,-7.84 0/0:56.9999:6:6:224:0:0:0,-1.80618,-10 0/0:44.9587:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:24:23:853:0:0:0,-6.92369,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:99:20:20:726:0:0:0,-6.0206,-10 0/0:90.1132:17:17:614:0:0:0,-5.11751,-10 0/0:81.0823:14:14:532:0:0:0,-4.21442,-10 0/0:63.0205:8:8:292:0:0:0,-2.40824,-10 0/0:96.1319:19:19:686:0:0:0,-5.71957,-10 0/0:99:26:26:953:0:0:0,-7.82678,-10 0/0:84.0924:15:15:531:0:0:0,-4.51545,-10 0/0:90.1132:17:17:615:0:0:0,-5.11751,-10 0/0:69.0411:10:10:373:0:0:0,-3.0103,-10 0/0:75.0616:12:12:426:0:0:0,-3.61236,-10 0/0:75.0616:12:12:454:0:0:0,-3.61236,-10 0/0:99:20:20:699:0:0:0,-6.0206,-10 0/0:78.072:13:13:445:0:0:0,-3.91339,-10 0/0:66.0308:9:9:293:0:0:0,-2.70927,-10 0/0:75.0616:12:12:423:0:0:0,-3.61236,-10 0/1:78.4602:20:14:530:6:199:-10,0,-10 0/0:66.0308:9:9:296:0:0:0,-2.70927,-10 0/0:60.0102:7:7:265:0:0:0,-2.10721,-10 0/0:93.1235:18:18:635:0:0:0,-5.41854,-10 0/0:69.0411:10:10:364:0:0:0,-3.0103,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/0:56.9999:6:6:227:0:0:0,-1.80618,-10 0/0:84.0924:15:15:547:0:0:0,-4.51545,-10 0/0:90.1132:17:17:628:0:0:0,-5.11751,-10 0/0:66.0308:9:9:338:0:0:0,-2.70927,-10 0/0:60.0102:7:7:226:0:0:0,-2.10721,-10 0/0:99:25:25:865:0:0:0,-7.52575,-10 0/0:75.0616:12:12:410:0:0:0,-3.61236,-10 0/0:69.0411:10:10:380:0:0:0,-3.0103,-10 0/0:90.1132:17:17:594:0:0:0,-5.11751,-10 0/0:99:20:20:723:0:0:0,-6.0206,-10 0/0:63.0205:8:8:269:0:0:0,-2.40824,-10 0/0:99:28:28:988:0:0:0,-8.42884,-10 0/0:93.1235:18:18:625:0:0:0,-5.41854,-10 0/0:63.0205:8:8:302:0:0:0,-2.40824,-10 0/0:99:31:31:1160:0:0:0,-9.33193,-10 0/0:87.1029:16:16:569:0:0:0,-4.81648,-10 0/0:99:29:29:1089:0:0:0,-8.72987,-10 0/0:63.0205:8:8:281:0:0:0,-2.40824,-10 0/0:53.9896:5:5:188:0:0:0,-1.50515,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/0:84.0924:15:15:496:0:0:0,-4.51545,-10 0/0:96.1319:19:19:694:0:0:0,-5.71957,-10 0/0:63.0205:8:8:298:0:0:0,-2.40824,-10 0/0:90.1132:17:17:624:0:0:0,-5.11751,-10 0/0:75.0616:12:12:435:0:0:0,-3.61236,-10 0/0:99:35:35:1292:0:0:0,-10,-10 0/0:75.0616:12:12:424:0:0:0,-3.61236,-10 0/0:93.1235:18:18:653:0:0:0,-5.41854,-10 0/0:90.1132:17:17:609:0:0:0,-5.11751,-10 0/0:60.0102:7:7:230:0:0:0,-2.10721,-10 0/0:99:23:23:800:0:0:0,-6.92369,-10 0/0:96.1319:19:19:670:0:0:0,-5.71957,-10 0/0:60.0102:7:7:265:0:0:0,-2.10721,-10 0/0:93.1235:18:18:677:0:0:0,-5.41854,-10 0/0:72.0514:11:11:380:0:0:0,-3.31133,-10 0/0:60.0102:7:7:266:0:0:0,-2.10721,-10 0/0:99:21:21:748:0:0:0,-6.32163,-10 0/0:87.1029:16:16:549:0:0:0,-4.81648,-10 0/0:75.0616:12:12:452:0:0:0,-3.61236,-10 0/0:99:26:26:953:0:0:0,-7.82678,-10 0/0:75.0616:12:12:445:0:0:0,-3.61236,-10 0/0:69.0411:10:10:375:0:0:0,-3.0103,-10 0/0:66.0308:9:9:340:0:0:0,-2.70927,-10 0/0:41.9484:1:1:38:0:0:0,-0.30103,-3.8 0/0:66.0308:9:9:336:0:0:0,-2.70927,-10 0/0:99:21:21:765:0:0:0,-6.32163,-10 0/0:99:25:25:872:0:0:0,-7.52575,-10 0/0:87.1029:16:16:596:0:0:0,-4.81648,-10 0/0:72.0514:11:11:411:0:0:0,-3.31133,-10 0/0:78.072:13:13:455:0:0:0,-3.91339,-10 0/0:63.0205:8:8:280:0:0:0,-2.40824,-10 0/0:69.0411:10:10:380:0:0:0,-3.0103,-10 0/0:63.0205:8:8:294:0:0:0,-2.40824,-10 0/0:60.0102:7:7:262:0:0:0,-2.10721,-10 0/0:87.1029:16:16:606:0:0:0,-4.81648,-10 0/0:75.0616:12:12:401:0:0:0,-3.61236,-10 0/0:66.0308:9:9:342:0:0:0,-2.70927,-10 scaffold_6 10039279 . A C 122.493 . AB=0.411765;ABP=4.1599;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1651;DPB=1651;DPRA=1.015;EPP=7.94546;EPPR=5.57683;GTI=0;LEN=1;MEANALT=1;MQM=54;MQMR=57.9579;NS=92;NUMALT=1;ODDS=11.5481;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=298;QR=59017;RO=1638;RPP=26.8965;RPPR=3559.88;RUN=1;SAF=8;SAP=7.94546;SAR=3;SRF=797;SRP=5.57683;SRR=841;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:88.7202:15:15:542:0:0:0,-4.51545,-10 0/0:99:23:23:821:0:0:0,-6.92369,-10 0/0:82.6999:13:13:490:0:0:0,-3.91339,-10 0/0:76.6794:11:11:409:0:0:0,-3.31133,-10 0/0:61.6279:6:6:228:0:0:0,-1.80618,-10 0/0:99:33:33:1175:0:0:0,-9.93399,-10 0/0:99:37:37:1329:0:0:0,-10,-10 0/0:91.7301:16:16:603:0:0:0,-4.81648,-10 0/0:73.6691:10:10:348:0:0:0,-3.0103,-10 0/0:70.6588:9:9:332:0:0:0,-2.70927,-10 0/0:55.6073:4:4:145:0:0:0,-1.20412,-10 0/0:99:30:30:1076:0:0:0,-9.0309,-10 0/0:99:22:22:798:0:0:0,-6.62266,-10 0/0:91.7301:16:16:541:0:0:0,-4.81648,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:99:19:19:712:0:0:0,-5.71957,-10 0/0:64.6382:7:7:253:0:0:0,-2.10721,-10 0/0:82.5967:21:20:696:1:14:0,-3.59941,-10 0/0:99:49:49:1797:0:0:0,-10,-10 0/0:91.7301:16:16:606:0:0:0,-4.81648,-10 0/0:99:23:23:828:0:0:0,-6.92369,-10 0/0:73.6691:10:10:369:0:0:0,-3.0103,-10 0/0:97.7484:18:18:643:0:0:0,-5.41854,-10 0/0:68.7263:16:15:557:1:14:0,-2.21236,-10 0/0:99:21:21:734:0:0:0,-6.32163,-10 0/0:67.6485:8:8:272:0:0:0,-2.40824,-10 0/0:82.6999:13:13:486:0:0:0,-3.91339,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:99:23:23:851:0:0:0,-6.92369,-10 0/0:64.6382:7:7:246:0:0:0,-2.10721,-10 0/0:58.6176:5:5:167:0:0:0,-1.50515,-10 0/0:94.7396:17:17:621:0:0:0,-5.11751,-10 0/0:82.6999:13:13:490:0:0:0,-3.91339,-10 0/0:99:19:19:663:0:0:0,-5.71957,-10 0/0:82.6999:13:13:480:0:0:0,-3.91339,-10 0/0:79.6897:12:12:455:0:0:0,-3.61236,-10 0/0:99:22:22:803:0:0:0,-6.62266,-10 0/0:73.6691:10:10:333:0:0:0,-3.0103,-10 0/0:85.7101:14:14:515:0:0:0,-4.21442,-10 0/0:99:26:26:913:0:0:0,-7.82678,-10 0/0:88.7202:15:15:535:0:0:0,-4.51545,-10 0/0:94.7396:18:17:612:0:0:0,-5.11751,-10 0/0:94.7396:17:17:615:0:0:0,-5.11751,-10 0/0:97.7484:18:18:680:0:0:0,-5.41854,-10 0/0:67.6485:9:8:267:0:0:0,-2.40824,-10 0/0:99:37:37:1319:0:0:0,-10,-10 0/0:99:20:20:708:0:0:0,-6.0206,-10 0/0:79.6897:12:12:434:0:0:0,-3.61236,-10 0/0:99:25:25:899:0:0:0,-7.52575,-10 0/0:76.6794:11:11:392:0:0:0,-3.31133,-10 0/0:99:26:26:971:0:0:0,-7.82678,-10 0/0:85.7101:14:14:507:0:0:0,-4.21442,-10 0/0:82.6999:13:13:479:0:0:0,-3.91339,-10 0/0:99:40:40:1426:0:0:0,-10,-10 0/0:61.6279:6:6:224:0:0:0,-1.80618,-10 0/0:91.7301:16:16:521:0:0:0,-4.81648,-10 0/0:76.6794:11:11:402:0:0:0,-3.31133,-10 0/0:82.6999:13:13:487:0:0:0,-3.91339,-10 0/0:50.153:9:8:277:1:14:0,-0.355027,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:99:24:24:866:0:0:0,-7.22472,-10 0/0:99:34:34:1225:0:0:0,-10,-10 0/0:88.7202:15:15:528:0:0:0,-4.51545,-10 0/0:88.7202:15:15:524:0:0:0,-4.51545,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:99:25:25:915:0:0:0,-7.52575,-10 0/0:79.6897:12:12:443:0:0:0,-3.61236,-10 0/0:99:36:36:1282:0:0:0,-10,-10 0/0:64.6382:7:7:261:0:0:0,-2.10721,-10 0/0:76.6794:11:11:398:0:0:0,-3.31133,-10 0/0:94.3975:28:27:976:1:16:0,-5.38168,-10 0/1:99:17:10:318:7:240:-10,0,-10 0/0:64.6382:7:7:244:0:0:0,-2.10721,-10 0/0:88.7202:15:15:540:0:0:0,-4.51545,-10 0/0:79.6897:12:12:433:0:0:0,-3.61236,-10 0/0:79.6897:12:12:415:0:0:0,-3.61236,-10 0/0:91.7301:16:16:560:0:0:0,-4.81648,-10 0/0:58.6176:5:5:164:0:0:0,-1.50515,-10 0/0:99:19:19:700:0:0:0,-5.71957,-10 0/0:99:43:43:1558:0:0:0,-10,-10 0/0:85.7101:14:14:506:0:0:0,-4.21442,-10 0/0:91.7301:16:16:550:0:0:0,-4.81648,-10 0/0:99:19:19:683:0:0:0,-5.71957,-10 0/0:99:20:20:716:0:0:0,-6.0206,-10 0/0:97.7484:18:18:643:0:0:0,-5.41854,-10 0/0:94.7396:17:17:606:0:0:0,-5.11751,-10 0/0:85.7101:14:14:469:0:0:0,-4.21442,-10 0/0:91.7301:16:16:582:0:0:0,-4.81648,-10 0/0:99:26:26:924:0:0:0,-7.82678,-10 0/0:99:22:22:808:0:0:0,-6.62266,-10 0/0:79.6897:12:12:430:0:0:0,-3.61236,-10 scaffold_46 451932 . T C 7541.02 . AB=0.466019;ABP=5.07636;AC=26;AF=0.144444;AN=180;AO=277;CIGAR=1X;DP=1711;DPB=1711;DPRA=1.16257;EPP=3.95885;EPPR=4.20081;GTI=1;LEN=1;MEANALT=1;MQM=59.9061;MQMR=59.9336;NS=90;NUMALT=1;ODDS=1.42039;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10031;QR=52697;RO=1430;RPP=587.262;RPPR=2911.65;RUN=1;SAF=146;SAP=4.77413;SAR=131;SRF=724;SRP=3.5023;SRR=706;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.2738:15:15:557:0:0:0,-4.51545,-10 0/0:46.2738:16:15:569:0:0:0,-4.51545,-10 0/0:52.2944:17:17:595:0:0:0,-5.11751,-10 0/0:34.2326:11:11:398:0:0:0,-3.31133,-10 0/0:46.2738:15:15:555:0:0:0,-4.51545,-10 0/0:13.1605:4:4:152:0:0:0,-1.20412,-10 0/0:99:38:38:1437:0:0:0,-10,-10 0/0:76.3768:25:25:909:0:0:0,-7.52575,-10 1/1:21.9461:14:0:0:14:485:-10,-4.21442,0 0/0:10.1502:3:3:114:0:0:0,-0.90309,-10 0/0:19.1811:6:6:225:0:0:0,-1.80618,-10 0/0:22.1914:7:7:248:0:0:0,-2.10721,-10 0/0:99:35:35:1253:0:0:0,-10,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:94.4383:31:31:1158:0:0:0,-9.33193,-10 0/0:79.3871:26:26:976:0:0:0,-7.82678,-10 0/1:99:27:15:544:12:433:-10,0,-10 0/0:40.2532:13:13:491:0:0:0,-3.91339,-10 0/0:70.3562:23:23:851:0:0:0,-6.92369,-10 0/0:73.3665:24:24:893:0:0:0,-7.22472,-10 0/1:99:10:6:227:4:152:-10,0,-10 0/1:99:32:18:677:14:514:-10,0,-10 0/0:16.1708:5:5:180:0:0:0,-1.50515,-10 0/0:55.3047:18:18:676:0:0:0,-5.41854,-10 0/0:67.3459:22:22:775:0:0:0,-6.62266,-10 0/0:76.3768:25:25:914:0:0:0,-7.52575,-10 0/0:49.2841:16:16:588:0:0:0,-4.81648,-10 0/0:52.2944:17:17:592:0:0:0,-5.11751,-10 1/1:55.0594:25:0:0:25:885:-10,-7.52575,0 0/0:52.2944:17:17:628:0:0:0,-5.11751,-10 0/0:28.212:9:9:328:0:0:0,-2.70927,-10 0/0:37.2429:12:12:455:0:0:0,-3.61236,-10 0/0:55.3047:18:18:679:0:0:0,-5.41854,-10 0/0:31.2223:10:10:332:0:0:0,-3.0103,-10 1/1:46.0285:22:0:0:22:811:-10,-6.62266,0 0/0:34.2326:11:11:418:0:0:0,-3.31133,-10 0/0:28.212:9:9:339:0:0:0,-2.70927,-10 0/1:99:27:16:600:11:418:-10,0,-10 0/0:73.3665:24:24:891:0:0:0,-7.22472,-10 0/1:99:16:3:114:13:488:-10,0,-8.57171 0/0:73.3665:24:24:908:0:0:0,-7.22472,-10 1/1:61.08:27:0:0:27:953:-10,-8.12781,0 0/0:55.3047:18:18:673:0:0:0,-5.41854,-10 1/1:82.1521:34:0:0:34:1274:-10,-10,0 0/0:52.2944:18:17:621:0:0:0,-5.11751,-10 0/0:31.2223:10:10:378:0:0:0,-3.0103,-10 0/0:99:47:47:1690:0:0:0,-10,-10 0/0:70.3562:23:23:853:0:0:0,-6.92369,-10 0/0:55.3047:18:18:683:0:0:0,-5.41854,-10 0/0:97.4428:32:32:1189:0:0:0,-9.63296,-10 0/0:28.212:9:9:327:0:0:0,-2.70927,-10 0/0:99:45:45:1666:0:0:0,-10,-10 0/0:46.2738:15:15:570:0:0:0,-4.51545,-10 0/0:28.212:9:9:318:0:0:0,-2.70927,-10 0/0:99:43:43:1597:0:0:0,-10,-10 0/0:58.315:19:19:711:0:0:0,-5.71957,-10 0/0:46.2738:15:15:559:0:0:0,-4.51545,-10 0/0:37.2429:12:12:427:0:0:0,-3.61236,-10 0/0:43.2635:14:14:514:0:0:0,-4.21442,-10 0/0:34.2326:11:11:404:0:0:0,-3.31133,-10 0/0:99:41:41:1519:0:0:0,-10,-10 0/0:46.2738:15:15:567:0:0:0,-4.51545,-10 0/1:99:37:23:829:14:496:-10,0,-10 0/0:14.0335:20:19:709:1:38:0,-0.91957,-10 0/0:25.2017:8:8:299:0:0:0,-2.40824,-10 0/0:99:42:41:1514:0:0:0,-10,-10 0/0:49.2841:16:16:572:0:0:0,-4.81648,-10 0/0:28.212:9:9:314:0:0:0,-2.70927,-10 0/0:99:34:34:1211:0:0:0,-10,-10 0/0:55.3047:18:18:660:0:0:0,-5.41854,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:43.2635:14:14:532:0:0:0,-4.21442,-10 0/0:52.2944:17:17:626:0:0:0,-5.11751,-10 0/0:37.2429:12:12:442:0:0:0,-3.61236,-10 0/0:25.2017:8:8:285:0:0:0,-2.40824,-10 1/1:27.9667:16:0:0:16:572:-10,-4.81648,0 1/1:15.9255:12:0:0:12:449:-10,-3.61236,0 0/0:25.2017:8:8:303:0:0:0,-2.40824,-10 0/1:0.559956:7:0:0:7:243:-10,-2.10721,0 0/0:91.4282:30:30:1127:0:0:0,-9.0309,-10 0/1:99:22:14:508:8:280:-10,0,-10 1/1:70.1109:30:0:0:30:1090:-10,-9.0309,0 0/1:98.5717:16:12:437:4:130:-10,0,-10 0/0:58.315:19:19:673:0:0:0,-5.71957,-10 0/0:10.1502:3:3:113:0:0:0,-0.90309,-10 0/0:64.3356:22:21:779:0:0:0,-6.32163,-10 0/0:37.2429:12:12:414:0:0:0,-3.61236,-10 0/0:31.2223:10:10:362:0:0:0,-3.0103,-10 0/0:34.2326:11:11:416:0:0:0,-3.31133,-10 0/1:99:12:3:114:9:320:-10,0,-9.37006 0/0:52.2944:17:17:645:0:0:0,-5.11751,-10 scaffold_46 625281 . A G 4208.57 . AB=0.618182;ABP=23.0273;AC=18;AF=0.0978261;AN=184;AO=154;CIGAR=1X;DP=1430;DPB=1430;DPRA=0.996702;EPP=7.57885;EPPR=21.7871;GTI=2;LEN=1;MEANALT=1;MQM=59.987;MQMR=59.9529;NS=92;NUMALT=1;ODDS=0.0699074;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5681;QR=46684;RO=1275;RPP=295.398;RPPR=2370.41;RUN=1;SAF=73;SAP=3.91273;SAR=81;SRF=633;SRP=3.14825;SRR=642;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.4243:11:11:414:0:0:0,-3.31133,-10 0/0:41.414:10:10:370:0:0:0,-3.0103,-10 0/0:47.4346:12:12:454:0:0:0,-3.61236,-10 0/0:65.4964:18:18:647:0:0:0,-5.41854,-10 0/1:99:16:10:371:6:228:-10,0,-10 0/0:32.3831:7:7:244:0:0:0,-2.10721,-10 1/1:50.1407:23:0:0:23:856:-10,-6.92369,0 0/1:99:20:4:129:16:596:-10,0,-9.59719 0/0:38.4037:9:9:281:0:0:0,-2.70927,-10 0/0:17.3316:2:2:76:0:0:0,-0.60206,-7.22 0/0:29.3728:6:6:228:0:0:0,-1.80618,-10 0/1:0.487528:8:0:0:8:274:-10,-2.40824,0 0/0:86.5684:25:25:916:0:0:0,-7.52575,-10 0/1:99:15:5:186:10:358:-10,0,-10 0/0:89.5786:26:26:927:0:0:0,-7.82678,-10 0/0:71.517:20:20:754:0:0:0,-6.0206,-10 0/1:99:21:10:375:11:416:-10,0,-10 0/0:32.3831:7:7:266:0:0:0,-2.10721,-10 0/0:47.4346:12:12:430:0:0:0,-3.61236,-10 0/0:92.5886:27:27:1010:0:0:0,-8.12781,-10 0/0:59.4758:16:16:604:0:0:0,-4.81648,-10 0/1:99:25:11:407:14:520:-10,0,-10 0/0:38.4037:9:9:342:0:0:0,-2.70927,-10 0/0:56.4655:15:15:545:0:0:0,-4.51545,-10 0/0:53.4552:14:14:525:0:0:0,-4.21442,-10 0/0:59.4758:16:16:604:0:0:0,-4.81648,-10 0/0:56.4655:15:15:566:0:0:0,-4.51545,-10 0/0:41.414:11:10:379:0:0:0,-3.0103,-10 1/1:14.0171:11:0:0:11:391:-10,-3.31133,0 0/0:80.5478:23:23:822:0:0:0,-6.92369,-10 0/0:38.4037:9:9:311:0:0:0,-2.70927,-10 0/0:44.4243:11:11:417:0:0:0,-3.31133,-10 0/0:47.4346:12:12:452:0:0:0,-3.61236,-10 0/0:20.3419:3:3:114:0:0:0,-0.90309,-10 0/0:44.4243:11:11:405:0:0:0,-3.31133,-10 0/0:29.3728:6:6:227:0:0:0,-1.80618,-10 0/0:29.3728:6:6:179:0:0:0,-1.80618,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:29.3728:6:6:218:0:0:0,-1.80618,-10 0/0:44.4243:11:11:417:0:0:0,-3.31133,-10 0/0:99:37:37:1382:0:0:0,-10,-10 0/1:34.0046:7:1:16:6:228:-10,0,-0.337888 0/0:41.414:10:10:380:0:0:0,-3.0103,-10 0/0:71.517:20:20:714:0:0:0,-6.0206,-10 0/0:50.4449:13:13:456:0:0:0,-3.91339,-10 0/0:68.5067:19:19:632:0:0:0,-5.71957,-10 0/0:86.5684:25:25:938:0:0:0,-7.52575,-10 0/0:86.5684:25:25:908:0:0:0,-7.52575,-10 0/0:41.414:10:10:372:0:0:0,-3.0103,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:50.4449:13:13:481:0:0:0,-3.91339,-10 0/0:99:37:37:1405:0:0:0,-10,-10 0/0:50.4449:13:13:457:0:0:0,-3.91339,-10 0/0:17.3316:2:2:71:0:0:0,-0.60206,-6.745 0/0:92.5886:27:27:1003:0:0:0,-8.12781,-10 0/0:59.4758:16:16:583:0:0:0,-4.81648,-10 0/0:59.4758:16:16:584:0:0:0,-4.81648,-10 1/1:4.98624:8:0:0:8:272:-10,-2.40824,0 0/0:74.5273:21:21:759:0:0:0,-6.32163,-10 1/1:11.0068:10:0:0:10:372:-10,-3.0103,0 0/0:71.517:20:20:724:0:0:0,-6.0206,-10 0/0:62.4861:17:17:638:0:0:0,-5.11751,-10 0/1:99:23:10:369:13:492:-10,0,-10 0/0:47.4346:12:12:455:0:0:0,-3.61236,-10 0/1:0.236926:7:0:0:7:264:-10,-2.10721,0 0/1:99:23:12:433:11:414:-10,0,-10 0/0:68.5067:19:19:716:0:0:0,-5.71957,-10 0/0:29.3728:6:6:225:0:0:0,-1.80618,-10 0/0:68.5067:19:19:666:0:0:0,-5.71957,-10 0/0:41.414:10:10:357:0:0:0,-3.0103,-10 0/0:53.4552:14:14:487:0:0:0,-4.21442,-10 0/0:44.4243:11:11:395:0:0:0,-3.31133,-10 0/0:68.5067:19:19:708:0:0:0,-5.71957,-10 0/0:47.4346:12:12:439:0:0:0,-3.61236,-10 0/0:99:30:30:1080:0:0:0,-9.0309,-10 0/0:56.4655:15:15:565:0:0:0,-4.51545,-10 0/0:53.4552:14:14:508:0:0:0,-4.21442,-10 0/0:53.4552:14:14:515:0:0:0,-4.21442,-10 0/0:35.3934:8:8:290:0:0:0,-2.40824,-10 0/0:56.4655:15:15:544:0:0:0,-4.51545,-10 0/0:80.5478:23:23:853:0:0:0,-6.92369,-10 0/0:83.5581:24:24:882:0:0:0,-7.22472,-10 0/0:95.5985:28:28:1042:0:0:0,-8.42884,-10 0/0:62.4861:17:17:630:0:0:0,-5.11751,-10 0/0:65.4964:18:18:681:0:0:0,-5.41854,-10 0/0:20.3419:3:3:91:0:0:0,-0.90309,-8.49333 0/0:44.4243:11:11:405:0:0:0,-3.31133,-10 0/0:59.4758:16:16:605:0:0:0,-4.81648,-10 0/0:41.414:10:10:371:0:0:0,-3.0103,-10 0/0:71.517:20:20:707:0:0:0,-6.0206,-10 0/0:65.4964:18:18:605:0:0:0,-5.41854,-10 0/0:53.4552:14:14:519:0:0:0,-4.21442,-10 scaffold_46 691294 . T C 4872.45 . AB=0.528571;ABP=4.49931;AC=15;AF=0.0815217;AN=184;AO=182;CIGAR=1X;DP=2011;DPB=2011;DPRA=1.19648;EPP=3.05802;EPPR=4.82006;GTI=1;LEN=1;MEANALT=1.16667;MQM=59.9341;MQMR=59.9786;NS=92;NUMALT=1;ODDS=1.65069;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6597;QR=67621;RO=1825;RPP=398.218;RPPR=3965.95;RUN=1;SAF=92;SAP=3.05802;SAR=90;SRF=893;SRP=4.82006;SRR=932;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.4798:14:14:532:0:0:0,-4.21442,-10 0/0:27.4077:7:7:266:0:0:0,-2.10721,-10 0/0:90.6233:28:28:1031:0:0:0,-8.42884,-10 0/0:66.5416:20:20:740:0:0:0,-6.0206,-10 0/1:84.4172:12:9:342:3:114:-9.37006,0,-10 0/0:33.4283:9:9:342:0:0:0,-2.70927,-10 1/1:63.3508:30:0:0:30:1108:-10,-9.0309,0 0/1:99:25:11:418:14:525:-10,0,-10 0/0:45.4695:13:13:457:0:0:0,-3.91339,-10 0/0:27.4077:7:7:262:0:0:0,-2.10721,-10 0/0:27.4077:7:7:262:0:0:0,-2.10721,-10 0/1:0.355885:9:0:0:9:313:-10,-2.70927,0 0/0:99:34:34:1275:0:0:0,-10,-10 0/1:99:42:23:846:19:654:-10,0,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:84.6032:26:26:958:0:0:0,-7.82678,-10 0/1:99:31:15:545:15:543:-10,0,-10 0/0:39.4489:11:11:393:0:0:0,-3.31133,-10 0/0:69.5519:21:21:767:0:0:0,-6.32163,-10 0/0:99:47:47:1721:0:0:0,-10,-10 0/0:57.5107:17:17:624:0:0:0,-5.11751,-10 0/0:90.6233:28:28:1010:0:0:0,-8.42884,-10 0/0:27.4077:7:7:239:0:0:0,-2.10721,-10 0/0:81.593:25:25:946:0:0:0,-7.52575,-10 0/0:78.5827:24:24:880:0:0:0,-7.22472,-10 0/0:57.5107:17:17:621:0:0:0,-5.11751,-10 0/0:32.7102:25:24:858:1:38:0,-2.32781,-10 0/0:30.418:8:8:302:0:0:0,-2.40824,-10 0/0:72.5622:22:22:770:0:0:0,-6.62266,-10 0/0:99:43:43:1601:0:0:0,-10,-10 0/0:30.418:8:8:304:0:0:0,-2.40824,-10 0/0:12.3562:2:2:76:0:0:0,-0.60206,-7.22 0/0:63.5313:19:19:702:0:0:0,-5.71957,-10 0/0:33.4283:9:9:330:0:0:0,-2.70927,-10 0/0:45.4695:13:13:493:0:0:0,-3.91339,-10 0/0:36.4386:10:10:377:0:0:0,-3.0103,-10 0/0:45.4695:13:13:486:0:0:0,-3.91339,-10 0/0:99:40:40:1456:0:0:0,-10,-10 0/0:39.4489:11:11:418:0:0:0,-3.31133,-10 0/0:60.521:18:18:681:0:0:0,-5.41854,-10 0/0:99:37:37:1378:0:0:0,-10,-10 0/0:84.6032:26:26:975:0:0:0,-7.82678,-10 0/0:48.4798:14:14:510:0:0:0,-4.21442,-10 0/0:99:38:38:1409:0:0:0,-10,-10 0/0:63.5313:19:19:718:0:0:0,-5.71957,-10 0/0:48.4798:14:14:522:0:0:0,-4.21442,-10 0/0:99:46:46:1678:0:0:0,-10,-10 0/0:63.5313:19:19:708:0:0:0,-5.71957,-10 0/0:69.5519:21:21:776:0:0:0,-6.32163,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:51.4901:15:15:569:0:0:0,-4.51545,-10 0/0:96.6421:31:30:1123:0:0:0,-9.0309,-10 0/0:84.6032:26:26:972:0:0:0,-7.82678,-10 0/0:42.4592:12:12:446:0:0:0,-3.61236,-10 0/0:99:59:59:2193:0:0:0,-10,-10 0/0:63.5313:19:19:722:0:0:0,-5.71957,-10 0/0:75.5724:23:23:847:0:0:0,-6.92369,-10 1/1:12.1757:13:0:0:13:494:-10,-3.91339,0 0/0:66.5416:20:20:751:0:0:0,-6.0206,-10 1/1:9.16541:12:0:0:12:420:-10,-3.61236,0 0/0:99:35:35:1287:0:0:0,-10,-10 0/0:63.5313:19:19:720:0:0:0,-5.71957,-10 0/1:99:51:27:1009:24:858:-10,0,-10 0/0:99:34:34:1222:0:0:0,-10,-10 1/1:18.1963:16:0:0:15:566:-10,-4.51545,0 0/1:99:40:13:482:27:964:-10,0,-10 0/0:57.5107:17:17:643:0:0:0,-5.11751,-10 0/0:60.521:18:18:683:0:0:0,-5.41854,-10 0/0:90.6233:28:28:1039:0:0:0,-8.42884,-10 0/0:30.418:8:8:300:0:0:0,-2.40824,-10 0/0:69.5519:21:21:797:0:0:0,-6.32163,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:63.5313:19:19:718:0:0:0,-5.71957,-10 0/0:75.5724:23:23:868:0:0:0,-6.92369,-10 0/0:75.5724:23:23:864:0:0:0,-6.92369,-10 0/0:69.5519:21:21:762:0:0:0,-6.32163,-10 0/0:63.5313:19:19:695:0:0:0,-5.71957,-10 0/0:75.5724:23:23:867:0:0:0,-6.92369,-10 0/0:30.418:8:8:302:0:0:0,-2.40824,-10 0/0:81.593:25:25:907:0:0:0,-7.52575,-10 0/0:99:47:46:1731:0:0:0,-10,-10 0/0:93.633:29:29:1084:0:0:0,-8.72987,-10 0/0:78.5827:24:24:910:0:0:0,-7.22472,-10 0/0:72.5622:22:22:813:0:0:0,-6.62266,-10 0/0:93.633:29:29:1098:0:0:0,-8.72987,-10 0/0:24.3974:6:6:228:0:0:0,-1.80618,-10 0/0:66.5416:20:20:758:0:0:0,-6.0206,-10 0/0:24.3974:6:6:224:0:0:0,-1.80618,-10 0/0:18.3768:4:4:130:0:0:0,-1.20412,-10 0/0:90.6233:28:28:1047:0:0:0,-8.42884,-10 0/0:69.5519:21:21:750:0:0:0,-6.32163,-10 0/0:51.4901:15:15:529:0:0:0,-4.51545,-10 scaffold_46 1199644 . C T 4343.08 . AB=0;ABP=0;AC=10;AF=0.0543478;AN=184;AO=162;CIGAR=1X;DP=2612;DPB=2612;DPRA=1.37105;EPP=3.06392;EPPR=5.89347;GTI=0;LEN=1;MEANALT=1.14286;MQM=59.6049;MQMR=59.9604;NS=92;NUMALT=1;ODDS=11.7871;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5854;QR=87981;RO=2447;RPP=354.789;RPPR=5290.58;RUN=1;SAF=82;SAP=3.06392;SAR=80;SRF=1251;SRP=5.69469;SRR=1196;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:27:27:981:0:0:0,-8.12781,-10 0/0:99:16:16:599:0:0:0,-4.81648,-10 0/0:99:34:34:1176:0:0:0,-10,-10 0/0:99:24:24:852:0:0:0,-7.22472,-10 0/0:99:16:16:601:0:0:0,-4.81648,-10 0/0:99:18:18:659:0:0:0,-5.41854,-10 0/0:99:53:53:1921:0:0:0,-10,-10 0/0:99:51:51:1828:0:0:0,-10,-10 0/0:99:26:26:950:0:0:0,-7.82678,-10 0/0:77.0847:5:5:143:0:0:0,-1.50515,-10 0/0:86.1152:8:8:257:0:0:0,-2.40824,-10 0/0:86.1152:8:8:291:0:0:0,-2.40824,-10 0/0:99:53:53:1891:0:0:0,-10,-10 0/0:99:52:52:1897:0:0:0,-10,-10 0/0:99:43:43:1436:0:0:0,-10,-10 0/0:99:41:40:1408:1:16:0,-9.12945,-10 0/0:99:34:34:1277:0:0:0,-10,-10 0/0:99:14:14:475:0:0:0,-4.21442,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:99:51:51:1891:0:0:0,-10,-10 0/0:99:24:24:899:0:0:0,-7.22472,-10 0/0:99:49:49:1771:0:0:0,-10,-10 0/0:99:18:18:636:0:0:0,-5.41854,-10 0/0:99:32:32:1131:0:0:0,-9.63296,-10 0/0:99:37:37:1366:0:0:0,-10,-10 0/0:99:40:40:1443:0:0:0,-10,-10 0/0:99:16:16:589:0:0:0,-4.81648,-10 0/0:99:18:18:649:0:0:0,-5.41854,-10 0/0:99:26:26:901:0:0:0,-7.82678,-10 0/0:99:59:59:2109:0:0:0,-10,-10 0/0:99:16:16:571:0:0:0,-4.81648,-10 0/0:89.1259:9:9:334:0:0:0,-2.70927,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:99:20:20:724:0:0:0,-6.0206,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:89.1259:9:9:304:0:0:0,-2.70927,-10 0/0:99:21:21:761:0:0:0,-6.32163,-10 0/0:99:38:38:1359:0:0:0,-10,-10 0/0:99:21:21:727:0:0:0,-6.32163,-10 0/0:99:26:26:867:0:0:0,-7.82678,-10 0/0:99:49:49:1774:0:0:0,-10,-10 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:99:26:26:909:0:0:0,-7.82678,-10 0/0:99:47:47:1642:0:0:0,-10,-10 0/0:99:34:34:1218:0:0:0,-10,-10 0/0:99:24:24:828:0:0:0,-7.22472,-10 0/0:99:50:50:1813:0:0:0,-10,-10 0/0:99:45:45:1668:0:0:0,-10,-10 0/0:98.1496:12:12:422:0:0:0,-3.61236,-10 0/0:99:46:46:1723:0:0:0,-10,-10 0/0:99:16:16:603:0:0:0,-4.81648,-10 0/0:99:41:41:1456:0:0:0,-10,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:80.095:6:6:204:0:0:0,-1.80618,-10 0/0:99:62:61:2193:1:16:0,-10,-10 0/0:99:14:14:519:0:0:0,-4.21442,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:99:20:20:693:0:0:0,-6.0206,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:99:14:13:465:0:0:0,-3.91339,-10 0/0:99:30:30:1063:0:0:0,-9.0309,-10 0/0:99:28:28:983:0:0:0,-8.42884,-10 0/0:99:42:42:1517:0:0:0,-10,-10 0/0:99:22:22:804:0:0:0,-6.62266,-10 0/0:99:19:19:709:0:0:0,-5.71957,-10 0/0:99:48:48:1668:0:0:0,-10,-10 0/0:99:19:19:699:0:0:0,-5.71957,-10 0/0:99:20:20:715:0:0:0,-6.0206,-10 0/0:99:51:51:1816:0:0:0,-10,-10 0/0:92.1345:10:10:363:0:0:0,-3.0103,-10 1/1:51.191:11:0:0:11:390:-10,-3.31133,0 1/1:99:40:0:0:40:1479:-10,-10,0 1/1:85.3153:39:1:37:38:1366:-10,-6.44911,0 1/1:99:28:0:0:27:986:-10,-8.12781,0 1/1:99:44:0:0:44:1601:-10,-10,0 0/0:99:26:26:890:0:0:0,-7.82678,-10 0/0:99:22:22:768:0:0:0,-6.62266,-10 0/0:99:19:19:687:0:0:0,-5.71957,-10 0/0:86.1152:8:8:302:0:0:0,-2.40824,-10 0/0:99:16:16:579:0:0:0,-4.81648,-10 0/0:99:47:47:1699:0:0:0,-10,-10 0/0:99:35:35:1268:0:0:0,-10,-10 0/0:99:31:31:1103:0:0:0,-9.33193,-10 0/0:99:40:40:1439:0:0:0,-10,-10 0/0:99:23:23:808:0:0:0,-6.92369,-10 0/0:92.1345:10:10:366:0:0:0,-3.0103,-10 0/0:99:29:29:1027:0:0:0,-8.72987,-10 0/0:99:17:16:594:0:0:0,-4.81648,-10 0/0:86.1152:8:8:293:0:0:0,-2.40824,-10 0/0:99:26:26:926:0:0:0,-7.82678,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:99:18:18:630:0:0:0,-5.41854,-10 scaffold_46 1572487 . C T 1171.05 . AB=0.605263;ABP=10.3247;AC=2;AF=0.0108696;AN=184;AO=47;CIGAR=1X;DP=2371;DPB=2371;DPRA=1.17054;EPP=6.75262;EPPR=6.84077;GTI=0;LEN=1;MEANALT=1;MQM=59.617;MQMR=60;NS=92;NUMALT=1;ODDS=2.13521;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1688;QR=84775;RO=2322;RPP=105.07;RPPR=5036.49;RUN=1;SAF=19;SAP=6.75262;SAR=28;SRF=1128;SRP=7.08391;SRR=1194;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.2419:17:16:583:0:0:0,-4.81648,-10 0/0:58.2831:20:20:735:0:0:0,-6.0206,-10 0/0:99:36:36:1316:0:0:0,-10,-10 0/0:58.2831:20:20:746:0:0:0,-6.0206,-10 0/0:73.3346:25:25:916:0:0:0,-7.52575,-10 0/0:19.1492:7:7:238:0:0:0,-2.10721,-10 0/0:99:51:51:1867:0:0:0,-10,-10 0/0:82.3656:28:28:1052:0:0:0,-8.42884,-10 0/0:43.2316:15:15:547:0:0:0,-4.51545,-10 0/0:25.1698:9:9:311:0:0:0,-2.70927,-10 0/0:28.1801:10:10:373:0:0:0,-3.0103,-10 0/0:31.1904:11:11:412:0:0:0,-3.31133,-10 0/0:99:40:40:1475:0:0:0,-10,-10 0/0:99:46:46:1702:0:0:0,-10,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:99:36:36:1298:0:0:0,-10,-10 0/0:99:37:37:1386:0:0:0,-10,-10 0/0:40.2213:14:14:524:0:0:0,-4.21442,-10 0/0:94.4048:32:32:1172:0:0:0,-9.63296,-10 0/0:99:47:47:1750:0:0:0,-10,-10 0/0:67.314:23:23:817:0:0:0,-6.92369,-10 0/1:99:49:28:1040:21:765:-10,0,-10 0/0:52.2625:18:18:658:0:0:0,-5.41854,-10 0/0:58.2831:20:20:755:0:0:0,-6.0206,-10 0/0:88.3856:30:30:1030:0:0:0,-9.0309,-10 0/0:97.4131:34:33:1186:0:0:0,-9.93399,-10 0/0:52.2625:18:18:675:0:0:0,-5.41854,-10 0/0:31.1904:11:11:382:0:0:0,-3.31133,-10 0/0:82.3656:28:28:1013:0:0:0,-8.42884,-10 0/0:91.3954:31:31:1162:0:0:0,-9.33193,-10 0/0:28.1801:10:10:356:0:0:0,-3.0103,-10 0/0:10.1183:4:4:150:0:0:0,-1.20412,-10 0/0:73.3346:25:25:891:0:0:0,-7.52575,-10 0/0:37.211:13:13:454:0:0:0,-3.91339,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:28.1801:10:10:371:0:0:0,-3.0103,-10 0/0:40.2213:14:14:516:0:0:0,-4.21442,-10 0/0:94.4048:32:32:1181:0:0:0,-9.63296,-10 0/0:67.314:23:23:871:0:0:0,-6.92369,-10 0/0:64.3037:22:22:819:0:0:0,-6.62266,-10 0/0:82.3656:28:28:1037:0:0:0,-8.42884,-10 0/1:59.3661:27:2:76:25:908:-10,0,-1.6375 0/0:85.3759:29:29:1016:0:0:0,-8.72987,-10 0/0:99:42:42:1480:0:0:0,-10,-10 0/0:61.2934:21:21:729:0:0:0,-6.32163,-10 0/0:55.2728:19:19:720:0:0:0,-5.71957,-10 0/0:99:38:38:1345:0:0:0,-10,-10 0/0:88.3856:30:30:1090:0:0:0,-9.0309,-10 0/0:52.2625:18:18:667:0:0:0,-5.41854,-10 0/0:99:37:37:1364:0:0:0,-10,-10 0/0:73.3346:25:25:918:0:0:0,-7.52575,-10 0/0:99:50:50:1872:0:0:0,-10,-10 0/0:76.3449:26:26:965:0:0:0,-7.82678,-10 0/0:25.1698:9:9:329:0:0:0,-2.70927,-10 0/0:99:41:41:1414:0:0:0,-10,-10 0/0:37.211:13:13:466:0:0:0,-3.91339,-10 0/0:43.2316:15:15:537:0:0:0,-4.51545,-10 0/0:25.1698:9:9:342:0:0:0,-2.70927,-10 0/0:55.2728:19:19:669:0:0:0,-5.71957,-10 0/0:76.3449:26:26:907:0:0:0,-7.82678,-10 0/0:99:56:56:2069:0:0:0,-10,-10 0/0:97.4131:33:33:1229:0:0:0,-9.93399,-10 0/0:99:45:45:1631:0:0:0,-10,-10 0/0:67.314:23:23:847:0:0:0,-6.92369,-10 0/0:40.2213:14:14:526:0:0:0,-4.21442,-10 0/0:99:42:42:1547:0:0:0,-10,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:49.2522:17:17:629:0:0:0,-5.11751,-10 0/0:99:49:49:1789:0:0:0,-10,-10 0/0:15.7763:14:13:476:1:15:0,-1.56829,-10 0/0:85.3759:29:29:1065:0:0:0,-8.72987,-10 0/0:97.4131:33:33:1218:0:0:0,-9.93399,-10 0/0:88.3856:30:30:1068:0:0:0,-9.0309,-10 0/0:43.2316:15:15:563:0:0:0,-4.51545,-10 0/0:99:34:34:1283:0:0:0,-10,-10 0/0:61.2934:21:21:771:0:0:0,-6.32163,-10 0/0:64.3037:22:22:800:0:0:0,-6.62266,-10 0/0:49.2522:17:17:596:0:0:0,-5.11751,-10 0/0:16.1389:6:6:228:0:0:0,-1.80618,-10 0/0:46.2419:16:16:582:0:0:0,-4.81648,-10 0/0:99:36:36:1335:0:0:0,-10,-10 0/0:97.4131:33:33:1202:0:0:0,-9.93399,-10 0/0:73.3346:25:25:920:0:0:0,-7.52575,-10 0/0:97.4131:33:33:1161:0:0:0,-9.93399,-10 0/0:79.3552:27:27:997:0:0:0,-8.12781,-10 0/0:40.2213:14:14:488:0:0:0,-4.21442,-10 0/0:55.2728:19:19:703:0:0:0,-5.71957,-10 0/0:55.2728:19:19:711:0:0:0,-5.71957,-10 0/0:34.2007:12:12:428:0:0:0,-3.61236,-10 0/0:64.3037:22:22:810:0:0:0,-6.62266,-10 0/0:99:38:38:1326:0:0:0,-10,-10 0/0:88.3856:30:30:1102:0:0:0,-9.0309,-10 scaffold_46 1572564 . A G 20786.1 . AB=0.460396;ABP=5.76226;AC=135;AF=0.733696;AN=184;AO=729;CIGAR=1X;DP=1049;DPB=1049;DPRA=0.841103;EPP=1586.01;EPPR=636.243;GTI=3;LEN=1;MEANALT=1.01316;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.0928606;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=26304;QR=11567;RO=319;RPP=9.04217;RPPR=3.56168;RUN=1;SAF=342;SAP=9.04217;SAR=387;SRF=148;SRP=6.61127;SRR=171;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:20.3135:8:8:256:0:0:0,-2.40824,-10 0/0:11.2826:5:5:166:0:0:0,-1.50515,-10 0/1:99:14:6:228:8:256:-10,0,-10 1/1:25.7523:7:0:0:7:260:-10,-2.10721,0 0/1:99:9:4:130:5:165:-10,0,-10 0/1:0.348609:2:0:0:2:76:-7.22,-0.60206,0 0/0:53.4268:19:19:716:0:0:0,-5.71957,-10 0/1:99:21:11:406:10:375:-10,0,-10 1/1:40.8038:12:0:0:12:446:-10,-3.61236,0 0/1:0.348609:2:0:0:2:39:-3.705,-0.60206,0 1/1:19.7317:5:0:0:5:179:-10,-1.50515,0 0/0:14.2929:6:6:228:0:0:0,-1.80618,-10 1/1:58.8656:18:0:0:18:676:-10,-5.41854,0 1/1:55.8553:17:0:0:17:609:-10,-5.11751,0 1/1:43.8141:13:0:0:13:457:-10,-3.91339,0 1/1:55.8553:17:0:0:17:639:-10,-5.11751,0 0/0:44.3959:16:16:585:0:0:0,-4.81648,-10 1/1:19.7317:5:0:0:5:190:-10,-1.50515,0 1/1:37.7935:11:0:0:11:415:-10,-3.31133,0 0/1:99:14:8:280:6:228:-10,0,-10 0/1:99:11:4:143:7:260:-10,0,-10 0/0:50.4165:18:18:660:0:0:0,-5.41854,-10 1/1:19.7317:5:0:0:5:184:-10,-1.50515,0 1/1:31.7729:9:0:0:9:309:-10,-2.70927,0 1/1:37.7935:11:0:0:11:418:-10,-3.31133,0 1/1:46.8244:14:0:0:14:510:-10,-4.21442,0 1/1:25.7523:7:0:0:7:264:-10,-2.10721,0 1/1:25.7523:7:0:0:7:266:-10,-2.10721,0 1/1:49.8347:15:0:0:15:528:-10,-4.51545,0 1/1:64.8862:20:0:0:20:760:-10,-6.0206,0 1/1:13.7111:3:0:0:3:114:-10,-0.90309,0 1/1:31.7729:9:0:0:9:316:-10,-2.70927,0 1/1:28.7626:8:0:0:8:304:-10,-2.40824,0 1/1:22.742:6:0:0:6:205:-10,-1.80618,0 0/0:38.3753:14:14:509:0:0:0,-4.21442,-10 0/1:0.348609:2:0:0:2:53:-5.035,-0.60206,0 1/1:19.7317:5:0:0:5:181:-10,-1.50515,0 0/0:35.365:13:13:482:0:0:0,-3.91339,-10 1/1:22.742:6:0:0:6:227:-10,-1.80618,0 1/1:10.7008:2:0:0:2:76:-7.22,-0.60206,0 1/1:52.845:16:0:0:16:578:-10,-4.81648,0 0/0:20.3135:8:8:271:0:0:0,-2.40824,-10 1/1:49.8347:15:0:0:15:471:-10,-4.51545,0 0/1:99:23:14:510:9:318:-10,0,-10 1/1:49.8347:15:0:0:15:567:-10,-4.51545,0 1/1:37.7935:11:0:0:11:380:-10,-3.31133,0 1/1:99:32:0:0:32:1174:-10,-9.63296,0 1/1:64.8862:20:0:0:20:696:-10,-6.0206,0 1/1:16.7214:4:0:0:4:136:-10,-1.20412,0 1/1:61.8759:19:0:0:19:682:-10,-5.71957,0 1/1:25.7523:7:0:0:7:265:-10,-2.10721,0 1/1:52.845:16:0:0:16:590:-10,-4.81648,0 1/1:19.7317:6:0:0:5:190:-10,-1.50515,0 1/1:16.7214:4:0:0:4:128:-10,-1.20412,0 1/1:76.9275:24:0:0:24:802:-10,-7.22472,0 1/1:37.7935:11:0:0:11:403:-10,-3.31133,0 1/1:46.8244:14:0:0:14:492:-10,-4.21442,0 0/1:49.2894:7:6:225:1:38:-2.53789,0,-10 0/0:29.3444:11:11:387:0:0:0,-3.31133,-10 1/1:25.7523:7:0:0:7:243:-10,-2.10721,0 1/1:43.8141:13:0:0:13:485:-10,-3.91339,0 1/1:22.742:6:0:0:6:215:-10,-1.80618,0 0/1:99:25:17:633:8:280:-10,0,-10 1/1:31.7729:9:0:0:9:335:-10,-2.70927,0 0/0:14.2929:6:6:228:0:0:0,-1.80618,-10 0/1:99:14:7:266:7:266:-10,0,-10 1/1:34.7832:10:0:0:10:380:-10,-3.0103,0 1/1:16.7214:4:0:0:4:152:-10,-1.20412,0 1/1:85.9582:27:0:0:27:999:-10,-8.12781,0 1/1:34.7832:10:0:0:10:375:-10,-3.0103,0 0/0:32.3547:12:12:439:0:0:0,-3.61236,-10 0/0:59.4474:21:21:759:0:0:0,-6.32163,-10 0/0:62.4577:22:22:819:0:0:0,-6.62266,-10 0/0:44.3959:16:16:589:0:0:0,-4.81648,-10 0/0:41.3856:15:15:524:0:0:0,-4.51545,-10 1/1:37.7935:11:0:0:11:411:-10,-3.31133,0 1/1:43.8141:13:0:0:13:475:-10,-3.91339,0 1/1:22.742:6:0:0:6:214:-10,-1.80618,0 1/1:10.7008:2:0:0:2:76:-7.22,-0.60206,0 1/1:22.742:6:0:0:6:221:-10,-1.80618,0 1/1:76.9275:24:0:0:24:800:-10,-7.22472,0 0/1:99:14:7:221:7:265:-10,0,-10 0/1:99:9:5:190:4:149:-10,0,-10 0/1:99:15:10:350:5:183:-10,0,-10 0/1:99:9:4:152:5:186:-10,0,-10 1/1:10.7008:2:0:0:2:52:-4.94,-0.60206,0 1/1:37.7935:11:0:0:11:404:-10,-3.31133,0 1/1:28.7626:8:0:0:8:303:-10,-2.40824,0 1/1:13.7111:3:0:0:3:105:-9.8,-0.90309,0 1/1:28.7626:8:0:0:8:297:-10,-2.40824,0 0/1:99:11:6:215:5:167:-10,0,-10 1/1:37.7935:11:0:0:11:371:-10,-3.31133,0 scaffold_46 1572577 . T C 147.588 . AB=0.533333;ABP=3.15506;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1039;DPB=1039;DPRA=0.973451;EPP=14.8328;EPPR=7.6719;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=6.84113;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=303;QR=37385;RO=1029;RPP=22.5536;RPPR=2100.64;RUN=1;SAF=1;SAP=14.8328;SAR=8;SRF=475;SRP=16.1805;SRR=554;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.175:8:8:290:0:0:0,-2.40824,-10 0/0:41.1441:5:5:133:0:0:0,-1.50515,-10 0/0:68.2368:14:14:522:0:0:0,-4.21442,-10 0/0:47.1647:7:7:266:0:0:0,-2.10721,-10 0/0:53.1853:9:9:322:0:0:0,-2.70927,-10 0/0:32.1132:2:2:75:0:0:0,-0.60206,-7.125 0/0:83.2882:19:19:692:0:0:0,-5.71957,-10 0/0:89.3085:21:21:760:0:0:0,-6.32163,-10 0/0:62.2162:12:12:426:0:0:0,-3.61236,-10 0/0:32.1132:2:2:31:0:0:0,-0.60206,-2.945 0/0:41.1441:5:5:187:0:0:0,-1.50515,-10 0/0:44.1544:6:6:206:0:0:0,-1.80618,-10 0/0:77.2677:17:17:609:0:0:0,-5.11751,-10 0/0:77.2677:17:17:593:0:0:0,-5.11751,-10 0/0:62.2162:13:12:451:0:0:0,-3.61236,-10 0/0:77.2677:17:17:631:0:0:0,-5.11751,-10 0/0:71.2471:15:15:517:0:0:0,-4.51545,-10 0/0:41.1441:5:5:183:0:0:0,-1.50515,-10 0/0:62.2162:12:12:435:0:0:0,-3.61236,-10 0/0:71.2471:15:15:558:0:0:0,-4.51545,-10 0/0:62.2162:12:12:431:0:0:0,-3.61236,-10 0/0:80.2779:18:18:652:0:0:0,-5.41854,-10 0/0:41.1441:5:5:190:0:0:0,-1.50515,-10 0/0:53.1853:9:9:342:0:0:0,-2.70927,-10 0/0:59.2059:11:11:409:0:0:0,-3.31133,-10 0/0:71.2471:15:15:554:0:0:0,-4.51545,-10 0/0:47.1647:7:7:258:0:0:0,-2.10721,-10 0/0:47.1647:7:7:266:0:0:0,-2.10721,-10 0/0:71.2471:15:15:539:0:0:0,-4.51545,-10 0/0:89.3085:21:21:787:0:0:0,-6.32163,-10 0/0:35.1235:3:3:113:0:0:0,-0.90309,-10 0/0:53.1853:9:9:326:0:0:0,-2.70927,-10 0/0:50.175:8:8:304:0:0:0,-2.40824,-10 0/0:44.1544:6:6:228:0:0:0,-1.80618,-10 0/0:68.2368:14:14:497:0:0:0,-4.21442,-10 0/0:32.1132:2:2:60:0:0:0,-0.60206,-5.7 0/0:41.1441:5:5:186:0:0:0,-1.50515,-10 0/0:65.2265:13:13:464:0:0:0,-3.91339,-10 0/0:44.1544:6:6:226:0:0:0,-1.80618,-10 0/0:32.1132:2:2:76:0:0:0,-0.60206,-7.22 0/0:74.2574:16:16:556:0:0:0,-4.81648,-10 0/0:50.175:8:8:269:0:0:0,-2.40824,-10 0/0:71.2471:15:15:513:0:0:0,-4.51545,-10 0/0:95.328:23:23:870:0:0:0,-6.92369,-10 0/0:71.2471:15:15:556:0:0:0,-4.51545,-10 0/0:59.2059:11:11:407:0:0:0,-3.31133,-10 0/0:99:32:32:1196:0:0:0,-9.63296,-10 0/0:86.2986:20:20:712:0:0:0,-6.0206,-10 0/0:38.1338:4:4:148:0:0:0,-1.20412,-10 0/0:83.2882:19:19:712:0:0:0,-5.71957,-10 0/0:47.1647:7:7:266:0:0:0,-2.10721,-10 0/0:71.2471:15:15:567:0:0:0,-4.51545,-10 0/0:44.1544:6:6:225:0:0:0,-1.80618,-10 0/0:38.1338:4:4:150:0:0:0,-1.20412,-10 0/0:95.328:23:23:829:0:0:0,-6.92369,-10 0/0:59.2059:11:11:384:0:0:0,-3.31133,-10 0/0:68.2368:14:14:498:0:0:0,-4.21442,-10 0/0:47.1647:7:7:261:0:0:0,-2.10721,-10 0/0:59.2059:11:11:406:0:0:0,-3.31133,-10 0/0:0.00461346:7:6:192:1:16:-0.337888,0,-10 0/0:65.2265:13:13:491:0:0:0,-3.91339,-10 0/0:44.1544:6:6:220:0:0:0,-1.80618,-10 0/0:99:25:25:879:0:0:0,-7.52575,-10 0/0:53.1853:9:9:332:0:0:0,-2.70927,-10 0/0:44.1544:6:6:227:0:0:0,-1.80618,-10 0/0:68.2368:14:14:507:0:0:0,-4.21442,-10 0/0:56.1956:10:10:380:0:0:0,-3.0103,-10 0/0:38.1338:4:4:152:0:0:0,-1.20412,-10 0/0:99:27:27:978:0:0:0,-8.12781,-10 0/0:56.1956:10:10:366:0:0:0,-3.0103,-10 0/0:62.2162:12:12:423:0:0:0,-3.61236,-10 0/0:89.3085:21:21:752:0:0:0,-6.32163,-10 0/1:99:15:7:258:8:287:-10,0,-10 0/0:71.2471:15:15:568:0:0:0,-4.51545,-10 0/0:65.2265:13:13:485:0:0:0,-3.91339,-10 0/0:59.2059:11:11:418:0:0:0,-3.31133,-10 0/0:65.2265:13:13:463:0:0:0,-3.91339,-10 0/0:44.1544:6:6:204:0:0:0,-1.80618,-10 0/0:32.1132:2:2:76:0:0:0,-0.60206,-7.22 0/0:44.1544:6:6:226:0:0:0,-1.80618,-10 0/0:98.3369:24:24:884:0:0:0,-7.22472,-10 0/0:68.2368:14:14:505:0:0:0,-4.21442,-10 0/0:53.1853:9:9:320:0:0:0,-2.70927,-10 0/0:68.2368:14:14:520:0:0:0,-4.21442,-10 0/0:53.1853:9:9:339:0:0:0,-2.70927,-10 0/0:32.1132:2:2:72:0:0:0,-0.60206,-6.84 0/0:59.2059:11:11:388:0:0:0,-3.31133,-10 0/0:50.175:8:8:295:0:0:0,-2.40824,-10 0/0:35.1235:3:3:110:0:0:0,-0.90309,-10 0/0:50.175:8:8:259:0:0:0,-2.40824,-10 0/0:59.2059:11:11:361:0:0:0,-3.31133,-10 0/0:59.2059:11:11:415:0:0:0,-3.31133,-10 scaffold_46 1933152 . G A 744.74 . AB=0.527273;ABP=3.36563;AC=2;AF=0.0108696;AN=184;AO=30;CIGAR=1X;DP=2160;DPB=2160;DPRA=1.03769;EPP=3.29983;EPPR=3.2103;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9201;NS=92;NUMALT=1;ODDS=7.2661;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1077;QR=77897;RO=2128;RPP=68.1545;RPPR=4580.58;RUN=1;SAF=14;SAP=3.29983;SAR=16;SRF=1052;SRP=3.59807;SRR=1076;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.6754:14:14:480:0:0:0,-4.21442,-10 0/0:64.6754:14:14:525:0:0:0,-4.21442,-10 0/0:97.7865:25:25:886:0:0:0,-7.52575,-10 0/0:73.7063:17:17:608:0:0:0,-5.11751,-10 0/0:73.7063:17:17:628:0:0:0,-5.11751,-10 0/0:67.6857:15:15:567:0:0:0,-4.51545,-10 0/0:99:49:49:1781:0:0:0,-10,-10 0/0:97.7865:25:25:881:0:0:0,-7.52575,-10 0/0:76.7166:18:18:628:0:0:0,-5.41854,-10 0/0:34.5724:4:4:152:0:0:0,-1.20412,-10 0/0:52.6342:10:10:376:0:0:0,-3.0103,-10 0/0:49.6239:9:9:312:0:0:0,-2.70927,-10 0/0:99:35:35:1322:0:0:0,-10,-10 0/0:99:38:38:1401:0:0:0,-10,-10 0/0:99:42:42:1543:0:0:0,-10,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:99:37:37:1344:0:0:0,-10,-10 0/0:49.6239:9:9:315:0:0:0,-2.70927,-10 0/0:82.7371:20:20:734:0:0:0,-6.0206,-10 0/0:99:45:45:1655:0:0:0,-10,-10 0/0:82.7371:20:20:748:0:0:0,-6.0206,-10 0/0:99:43:43:1589:0:0:0,-10,-10 0/0:58.6548:12:12:445:0:0:0,-3.61236,-10 0/0:99:28:28:1043:0:0:0,-8.42884,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:99:30:30:1077:0:0:0,-9.0309,-10 0/0:99:26:26:976:0:0:0,-7.82678,-10 0/0:64.6754:14:14:528:0:0:0,-4.21442,-10 0/0:76.7166:18:18:655:0:0:0,-5.41854,-10 0/0:94.7773:24:24:884:0:0:0,-7.22472,-10 0/0:31.5621:3:3:114:0:0:0,-0.90309,-10 0/0:55.6445:11:11:370:0:0:0,-3.31133,-10 0/0:73.7063:17:17:646:0:0:0,-5.11751,-10 0/0:58.6548:12:12:451:0:0:0,-3.61236,-10 0/0:82.7371:20:20:757:0:0:0,-6.0206,-10 0/0:70.696:16:16:603:0:0:0,-4.81648,-10 0/0:52.6342:10:10:378:0:0:0,-3.0103,-10 0/0:99:42:42:1516:0:0:0,-10,-10 0/0:91.7676:23:23:846:0:0:0,-6.92369,-10 0/0:67.6857:15:15:563:0:0:0,-4.51545,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/0:97.7865:25:25:914:0:0:0,-7.52575,-10 0/0:76.7166:18:18:669:0:0:0,-5.41854,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:82.7371:20:20:723:0:0:0,-6.0206,-10 0/0:99:56:56:2050:0:0:0,-10,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:55.6445:11:11:403:0:0:0,-3.31133,-10 0/0:99:40:39:1361:0:0:0,-10,-10 0/0:61.6651:13:13:450:0:0:0,-3.91339,-10 0/0:99:35:35:1266:0:0:0,-10,-10 0/0:85.7474:21:21:786:0:0:0,-6.32163,-10 0/0:61.6651:13:13:457:0:0:0,-3.91339,-10 0/0:99:48:48:1745:0:0:0,-10,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:99:28:28:1056:0:0:0,-8.42884,-10 0/0:51.0424:18:17:599:1:16:0,-2.56327,-10 0/0:97.7865:25:25:906:0:0:0,-7.52575,-10 0/0:73.7063:17:17:605:0:0:0,-5.11751,-10 0/0:99:49:49:1814:0:0:0,-10,-10 0/0:91.7676:23:23:824:0:0:0,-6.92369,-10 0/1:99:48:26:983:22:798:-10,0,-10 0/0:99:33:33:1216:0:0:0,-9.93399,-10 0/1:2.82665e-05:7:0:0:7:263:-10,-2.10721,0 0/0:99:28:28:1058:0:0:0,-8.42884,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:61.6651:13:13:479:0:0:0,-3.91339,-10 0/0:99:35:35:1251:0:0:0,-10,-10 0/0:52.6342:10:10:375:0:0:0,-3.0103,-10 0/0:99:30:30:1130:0:0:0,-9.0309,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:99:30:30:1073:0:0:0,-9.0309,-10 0/0:64.6754:14:14:521:0:0:0,-4.21442,-10 0/0:99:37:37:1326:0:0:0,-10,-10 0/0:52.6342:10:10:358:0:0:0,-3.0103,-10 0/0:55.6445:11:11:415:0:0:0,-3.31133,-10 0/0:76.7166:18:18:681:0:0:0,-5.41854,-10 0/0:37.5827:5:5:186:0:0:0,-1.50515,-10 0/0:52.6342:10:10:334:0:0:0,-3.0103,-10 0/0:99:42:42:1503:0:0:0,-10,-10 0/0:76.7166:18:18:628:0:0:0,-5.41854,-10 0/0:99:32:31:1132:0:0:0,-9.33193,-10 0/0:94.7773:24:24:882:0:0:0,-7.22472,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:43.6033:7:7:255:0:0:0,-2.10721,-10 0/0:85.7474:21:21:780:0:0:0,-6.32163,-10 0/0:58.6548:12:12:445:0:0:0,-3.61236,-10 0/0:58.6548:12:12:447:0:0:0,-3.61236,-10 0/0:85.7474:21:21:775:0:0:0,-6.32163,-10 0/0:85.7474:21:21:775:0:0:0,-6.32163,-10 0/0:88.7575:22:22:834:0:0:0,-6.62266,-10 scaffold_46 2046515 . C T 15491 . AB=0.471299;ABP=5.37858;AC=49;AF=0.266304;AN=184;AO=552;CIGAR=1X;DP=1914;DPB=1914;DPRA=1.28118;EPP=10.6262;EPPR=3.11249;GTI=2;LEN=1;MEANALT=1;MQM=59.9547;MQMR=60;NS=92;NUMALT=1;ODDS=0.619404;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=20130;QR=49789;RO=1360;RPP=1192.99;RPPR=2904.33;RUN=1;SAF=253;SAP=11.3343;SAR=299;SRF=678;SRP=3.03585;SRR=682;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:38.1205:14:14:512:0:0:0,-4.21442,-10 0/0:14.0381:6:6:228:0:0:0,-1.80618,-10 0/0:44.1411:16:16:607:0:0:0,-4.81648,-10 0/0:35.1102:13:13:493:0:0:0,-3.91339,-10 0/0:44.1411:16:16:584:0:0:0,-4.81648,-10 0/0:53.172:19:19:694:0:0:0,-5.71957,-10 0/0:98.3264:34:34:1246:0:0:0,-10,-10 0/0:77.2544:27:27:977:0:0:0,-8.12781,-10 0/0:41.1308:15:15:558:0:0:0,-4.51545,-10 0/0:26.0793:10:10:378:0:0:0,-3.0103,-10 0/0:17.0484:7:7:258:0:0:0,-2.10721,-10 0/0:26.0793:10:10:358:0:0:0,-3.0103,-10 0/0:50.401:35:34:1268:1:38:0,-5.19198,-10 0/0:99:47:47:1745:0:0:0,-10,-10 0/0:80.2647:28:28:1056:0:0:0,-8.42884,-10 0/0:59.1926:21:21:766:0:0:0,-6.32163,-10 0/0:68.2235:24:24:866:0:0:0,-7.22472,-10 0/0:38.1205:14:14:510:0:0:0,-4.21442,-10 0/1:99:29:16:585:13:444:-10,0,-10 1/1:44.4694:36:1:38:35:1282:-10,-5.48078,0 0/1:99:13:6:228:7:266:-10,0,-10 0/1:99:30:16:575:14:490:-10,0,-10 1/1:25.9794:13:0:0:13:487:-10,-3.91339,0 0/1:99:24:13:488:11:387:-10,0,-10 0/0:62.2029:22:22:793:0:0:0,-6.62266,-10 1/1:53.0721:22:0:0:22:806:-10,-6.62266,0 0/0:53.172:19:19:702:0:0:0,-5.71957,-10 0/0:38.1205:14:14:531:0:0:0,-4.21442,-10 1/1:53.0721:22:0:0:22:805:-10,-6.62266,0 0/1:99:19:12:454:7:262:-10,0,-10 1/1:7.91762:7:0:0:7:265:-10,-2.10721,0 0/0:41.1308:15:15:530:0:0:0,-4.51545,-10 1/1:28.9897:14:0:0:14:517:-10,-4.21442,0 0/0:17.0484:7:7:266:0:0:0,-2.10721,-10 0/0:59.1926:21:21:759:0:0:0,-6.32163,-10 0/1:0.739028:6:0:0:6:228:-10,-1.80618,0 1/1:32:15:0:0:15:524:-10,-4.51545,0 0/1:99:33:16:568:17:560:-10,0,-10 0/0:32.0999:12:12:455:0:0:0,-3.61236,-10 0/1:99:25:12:451:13:487:-10,0,-10 0/1:99:36:21:789:15:569:-10,0,-10 0/0:65.2132:23:23:817:0:0:0,-6.92369,-10 0/0:71.2338:25:25:939:0:0:0,-7.52575,-10 0/1:99:41:25:916:16:595:-10,0,-10 1/1:41.0309:18:0:0:18:635:-10,-5.41854,0 1/1:32:15:0:0:15:559:-10,-4.51545,0 1/1:99:47:0:0:47:1738:-10,-10,0 1/1:74.1442:29:0:0:29:1051:-10,-8.72987,0 1/1:25.9794:13:0:0:13:468:-10,-3.91339,0 0/1:99:35:20:711:15:568:-10,0,-10 1/1:25.9794:13:0:0:13:483:-10,-3.91339,0 0/1:99:35:18:625:17:642:-10,0,-10 0/0:35.1102:13:13:476:0:0:0,-3.91339,-10 0/1:0.353813:5:0:0:5:189:-10,-1.50515,0 1/1:99:44:0:0:44:1515:-10,-10,0 1/1:41.0309:18:0:0:18:681:-10,-5.41854,0 1/1:56.0824:23:0:0:23:858:-10,-6.92369,0 0/0:17.0484:7:7:244:0:0:0,-2.10721,-10 0/0:41.1308:15:15:555:0:0:0,-4.51545,-10 0/0:17.0484:8:7:266:0:0:0,-2.10721,-10 0/0:99:35:35:1309:0:0:0,-10,-10 0/0:41.1308:15:15:552:0:0:0,-4.51545,-10 0/0:92.3042:32:32:1161:0:0:0,-9.63296,-10 0/0:65.2132:23:23:859:0:0:0,-6.92369,-10 0/0:29.0896:11:11:405:0:0:0,-3.31133,-10 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:71.2338:25:25:923:0:0:0,-7.52575,-10 0/0:29.0896:11:11:409:0:0:0,-3.31133,-10 0/0:95.3128:33:33:1234:0:0:0,-9.93399,-10 0/0:65.2132:23:23:823:0:0:0,-6.92369,-10 0/0:50.1617:18:18:660:0:0:0,-5.41854,-10 0/0:99:35:35:1227:0:0:0,-10,-10 0/0:71.2338:25:25:897:0:0:0,-7.52575,-10 0/0:53.172:19:19:703:0:0:0,-5.71957,-10 0/0:62.2029:22:22:745:0:0:0,-6.62266,-10 0/0:44.1411:16:16:587:0:0:0,-4.81648,-10 0/0:53.172:19:19:705:0:0:0,-5.71957,-10 0/0:62.2029:22:22:796:0:0:0,-6.62266,-10 0/0:26.0793:10:10:374:0:0:0,-3.0103,-10 0/0:26.0793:10:10:377:0:0:0,-3.0103,-10 0/0:72.0748:38:37:1376:1:25:0,-7.35936,-10 0/0:71.2338:25:25:894:0:0:0,-7.52575,-10 0/0:47.1514:18:17:619:0:0:0,-5.11751,-10 0/0:68.2235:24:24:873:0:0:0,-7.22472,-10 0/0:44.1411:16:16:543:0:0:0,-4.81648,-10 0/0:8.01755:4:4:151:0:0:0,-1.20412,-10 1/1:68.1236:27:0:0:27:1010:-10,-8.12781,0 1/1:44.0412:19:0:0:19:696:-10,-5.71957,0 0/0:26.0793:10:10:363:0:0:0,-3.0103,-10 0/0:44.1411:16:16:566:0:0:0,-4.81648,-10 0/0:56.1823:20:20:751:0:0:0,-6.0206,-10 0/0:44.1411:16:16:581:0:0:0,-4.81648,-10 scaffold_46 2157644 . C T 417.144 . AB=0.59375;ABP=5.45321;AC=1;AF=0.00537634;AN=186;AO=20;CIGAR=1X;DP=1780;DPB=1780;DPRA=1.66948;EPP=6.91895;EPPR=3.32615;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9858;NS=93;NUMALT=1;ODDS=2.98159;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=664;QR=64695;RO=1760;RPP=46.4397;RPPR=3807.45;RUN=1;SAF=7;SAP=6.91895;SAR=13;SRF=886;SRP=3.18797;SRR=874;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:43.3396:11:11:415:0:0:0,-3.31133,-10 0/0:55.3808:15:15:562:0:0:0,-4.51545,-10 0/0:67.422:19:19:680:0:0:0,-5.71957,-10 0/0:40.3293:10:10:378:0:0:0,-3.0103,-10 0/0:49.3602:13:13:494:0:0:0,-3.91339,-10 0/0:34.3087:8:8:300:0:0:0,-2.40824,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:82.4734:24:24:899:0:0:0,-7.22472,-10 0/0:52.3705:14:14:525:0:0:0,-4.21442,-10 0/0:31.2984:7:7:266:0:0:0,-2.10721,-10 0/0:28.2881:6:6:226:0:0:0,-1.80618,-10 0/0:31.2984:7:7:263:0:0:0,-2.10721,-10 0/0:99:34:34:1242:0:0:0,-10,-10 0/0:54.7352:31:30:1079:1:34:0,-4.44057,-10 0/0:99:38:38:1418:0:0:0,-10,-10 0/0:97.5204:29:29:1088:0:0:0,-8.72987,-10 0/0:76.4529:22:22:831:0:0:0,-6.62266,-10 0/0:55.3808:15:15:554:0:0:0,-4.51545,-10 0/0:82.4734:24:24:851:0:0:0,-7.22472,-10 0/0:99:37:37:1356:0:0:0,-10,-10 0/0:73.4426:21:21:761:0:0:0,-6.32163,-10 0/0:99:32:32:1145:0:0:0,-9.63296,-10 0/0:28.2881:6:6:228:0:0:0,-1.80618,-10 0/0:88.4942:26:26:942:0:0:0,-7.82678,-10 0/0:64.4117:18:18:654:0:0:0,-5.41854,-10 0/0:82.4734:24:24:882:0:0:0,-7.22472,-10 0/0:82.4734:24:24:899:0:0:0,-7.22472,-10 0/0:49.3602:13:13:489:0:0:0,-3.91339,-10 0/0:64.4117:18:18:647:0:0:0,-5.41854,-10 0/0:99:35:35:1290:0:0:0,-10,-10 0/0:40.3293:10:10:375:0:0:0,-3.0103,-10 0/0:25.2778:5:5:183:0:0:0,-1.50515,-10 0/0:46.3499:12:12:451:0:0:0,-3.61236,-10 0/0:28.2881:6:6:228:0:0:0,-1.80618,-10 0/0:52.3705:14:14:532:0:0:0,-4.21442,-10 0/0:40.3293:10:10:380:0:0:0,-3.0103,-10 0/0:49.3602:13:13:492:0:0:0,-3.91339,-10 0/0:99:39:39:1428:0:0:0,-10,-10 0/0:64.4117:18:18:678:0:0:0,-5.41854,-10 0/0:58.3911:16:16:583:0:0:0,-4.81648,-10 0/0:88.4942:26:26:907:0:0:0,-7.82678,-10 0/0:49.3602:13:13:462:0:0:0,-3.91339,-10 0/0:46.3499:12:12:448:0:0:0,-3.61236,-10 0/1:99:32:13:488:19:630:-10,0,-10 0/0:82.4734:24:24:855:0:0:0,-7.22472,-10 0/0:49.3602:13:13:483:0:0:0,-3.91339,-10 0/0:99:42:42:1533:0:0:0,-10,-10 0/0:99:40:40:1420:0:0:0,-10,-10 0/0:73.4426:21:21:768:0:0:0,-6.32163,-10 0/0:97.5204:29:29:1040:0:0:0,-8.72987,-10 0/0:25.2778:5:5:190:0:0:0,-1.50515,-10 0/0:99:32:32:1172:0:0:0,-9.63296,-10 0/0:40.3293:10:10:366:0:0:0,-3.0103,-10 0/0:40.3293:10:10:375:0:0:0,-3.0103,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:52.3705:14:14:521:0:0:0,-4.21442,-10 0/0:64.4117:18:18:644:0:0:0,-5.41854,-10 0/0:40.3293:10:10:378:0:0:0,-3.0103,-10 0/0:64.4117:18:18:626:0:0:0,-5.41854,-10 0/0:55.3808:15:15:546:0:0:0,-4.51545,-10 0/0:99:47:47:1744:0:0:0,-10,-10 0/0:43.3396:11:11:412:0:0:0,-3.31133,-10 0/0:99:49:49:1821:0:0:0,-10,-10 0/0:55.3808:15:15:533:0:0:0,-4.51545,-10 0/0:52.3705:14:14:532:0:0:0,-4.21442,-10 0/0:79.4631:23:23:860:0:0:0,-6.92369,-10 0/0:58.3911:16:16:608:0:0:0,-4.81648,-10 0/0:37.319:9:9:333:0:0:0,-2.70927,-10 0/0:88.4942:26:26:948:0:0:0,-7.82678,-10 0/0:40.3293:10:10:380:0:0:0,-3.0103,-10 0/0:61.4014:17:17:639:0:0:0,-5.11751,-10 0/0:76.4529:22:22:797:0:0:0,-6.62266,-10 0/0:76.4529:22:22:821:0:0:0,-6.62266,-10 0/0:61.4014:17:17:617:0:0:0,-5.11751,-10 0/0:64.4117:18:18:646:0:0:0,-5.41854,-10 0/0:40.3293:10:10:327:0:0:0,-3.0103,-10 0/0:61.4014:17:17:635:0:0:0,-5.11751,-10 0/0:49.3602:13:13:489:0:0:0,-3.91339,-10 0/0:43.3396:11:11:410:0:0:0,-3.31133,-10 0/0:37.319:9:9:330:0:0:0,-2.70927,-10 0/0:99:34:34:1212:0:0:0,-10,-10 0/0:76.4529:22:22:823:0:0:0,-6.62266,-10 0/0:58.3911:16:16:592:0:0:0,-4.81648,-10 0/0:82.4734:24:24:904:0:0:0,-7.22472,-10 0/0:70.4323:20:20:746:0:0:0,-6.0206,-10 0/0:28.2881:6:6:227:0:0:0,-1.80618,-10 0/0:55.3808:15:15:559:0:0:0,-4.51545,-10 0/0:46.3499:12:12:450:0:0:0,-3.61236,-10 0/0:28.2881:6:6:214:0:0:0,-1.80618,-10 0/0:67.422:19:19:718:0:0:0,-5.71957,-10 0/0:67.422:19:19:719:0:0:0,-5.71957,-10 0/0:99:30:30:1051:0:0:0,-9.0309,-10 scaffold_46 2192235 . C G 6463.99 . AB=0.522267;ABP=4.07406;AC=29;AF=0.157609;AN=184;AO=236;CIGAR=1X;DP=1477;DPB=1477;DPRA=1.06577;EPP=3.59917;EPPR=8.11676;GTI=2;LEN=1;MEANALT=1;MQM=59.8008;MQMR=59.9548;NS=92;NUMALT=1;ODDS=0.079224;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8692;QR=45328;RO=1240;RPP=506.829;RPPR=2609.48;RUN=1;SAF=121;SAP=3.34154;SAR=115;SRF=637;SRP=5.03467;SRR=603;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:43.4718:11:11:410:0:0:0,-3.31133,-10 0/0:55.513:15:15:559:0:0:0,-4.51545,-10 0/0:55.513:15:15:562:0:0:0,-4.51545,-10 0/0:43.4718:11:11:382:0:0:0,-3.31133,-10 0/0:46.4821:12:12:441:0:0:0,-3.61236,-10 0/1:0.635651:8:0:0:8:304:-10,-2.40824,0 0/0:99:33:33:1193:0:0:0,-9.93399,-10 0/0:67.5542:19:19:711:0:0:0,-5.71957,-10 0/0:49.4924:13:13:487:0:0:0,-3.91339,-10 0/0:19.3894:3:3:75:0:0:0,-0.90309,-7 0/0:31.4306:7:7:257:0:0:0,-2.10721,-10 0/0:37.4512:9:9:303:0:0:0,-2.70927,-10 1/1:51.2645:23:0:0:23:845:-10,-6.92369,0 0/0:82.6056:24:24:911:0:0:0,-7.22472,-10 0/0:88.626:26:26:960:0:0:0,-7.82678,-10 0/1:99:22:10:377:12:432:-10,0,-10 0/0:61.5336:17:17:641:0:0:0,-5.11751,-10 0/0:28.4203:6:6:215:0:0:0,-1.80618,-10 0/1:99:14:6:228:8:300:-10,0,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:46.4821:12:12:451:0:0:0,-3.61236,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:34.4409:8:8:300:0:0:0,-2.40824,-10 0/1:99:12:6:224:6:216:-10,0,-10 1/1:30.1924:16:0:0:16:590:-10,-4.81648,0 0/0:58.5233:16:16:596:0:0:0,-4.81648,-10 1/1:18.1512:12:0:0:12:451:-10,-3.61236,0 0/1:0.635651:8:0:0:8:301:-10,-2.40824,0 0/0:58.5233:16:16:599:0:0:0,-4.81648,-10 0/1:99:34:15:570:19:696:-10,0,-10 0/0:19.3894:3:3:87:0:0:0,-0.90309,-8.12 1/1:21.1615:13:0:0:13:484:-10,-3.91339,0 0/0:76.5851:22:22:797:0:0:0,-6.62266,-10 0/0:52.5027:14:14:526:0:0:0,-4.21442,-10 0/0:37.4512:9:9:308:0:0:0,-2.70927,-10 0/0:31.4306:7:7:266:0:0:0,-2.10721,-10 0/0:40.4615:10:10:380:0:0:0,-3.0103,-10 0/0:99:30:30:1060:0:0:0,-9.0309,-10 0/0:46.4821:12:12:449:0:0:0,-3.61236,-10 0/0:37.4512:9:9:341:0:0:0,-2.70927,-10 0/1:99:25:14:524:11:407:-10,0,-10 0/0:49.4924:14:13:478:0:0:0,-3.91339,-10 0/0:64.5439:18:18:663:0:0:0,-5.41854,-10 0/0:70.5645:20:20:705:0:0:0,-6.0206,-10 0/0:46.4821:12:12:450:0:0:0,-3.61236,-10 0/0:52.5027:14:14:497:0:0:0,-4.21442,-10 0/0:91.636:27:27:1001:0:0:0,-8.12781,-10 0/0:85.6159:25:25:909:0:0:0,-7.52575,-10 0/0:31.4306:7:7:227:0:0:0,-2.10721,-10 0/1:99:33:18:662:15:565:-10,0,-10 0/0:37.4512:9:9:329:0:0:0,-2.70927,-10 0/1:99:27:16:608:11:407:-10,0,-10 1/1:24.1718:14:0:0:14:532:-10,-4.21442,0 0/0:28.4203:6:6:226:0:0:0,-1.80618,-10 0/0:99:31:31:1153:0:0:0,-9.33193,-10 0/0:46.4821:12:12:408:0:0:0,-3.61236,-10 0/0:58.5233:16:16:594:0:0:0,-4.81648,-10 0/0:58.5233:16:16:577:0:0:0,-4.81648,-10 0/0:40.4615:10:10:375:0:0:0,-3.0103,-10 0/0:40.4615:10:10:327:0:0:0,-3.0103,-10 0/0:82.6056:24:24:860:0:0:0,-7.22472,-10 0/0:64.5439:18:18:626:0:0:0,-5.41854,-10 0/0:91.636:27:27:973:0:0:0,-8.12781,-10 0/1:99:20:7:237:13:483:-10,0,-10 0/0:28.4203:6:6:228:0:0:0,-1.80618,-10 0/0:99:30:30:1071:0:0:0,-9.0309,-10 0/1:99:10:6:223:4:139:-10,0,-10 1/1:9.12032:9:0:0:9:282:-10,-2.70927,0 0/1:99:18:9:338:9:334:-10,0,-10 1/1:18.1512:12:0:0:12:454:-10,-3.61236,0 0/0:61.5336:17:17:619:0:0:0,-5.11751,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:67.5542:19:19:711:0:0:0,-5.71957,-10 0/0:37.4512:9:9:328:0:0:0,-2.70927,-10 0/0:73.5748:21:21:738:0:0:0,-6.32163,-10 1/1:6.11002:8:0:0:8:280:-10,-2.40824,0 0/0:49.4924:13:13:472:0:0:0,-3.91339,-10 0/0:52.5027:14:14:493:0:0:0,-4.21442,-10 0/0:22.3997:4:4:136:0:0:0,-1.20412,-10 0/0:25.41:5:5:182:0:0:0,-1.50515,-10 0/0:97.6546:29:29:1079:0:0:0,-8.72987,-10 0/0:94.6456:28:28:1036:0:0:0,-8.42884,-10 0/0:79.5954:23:23:843:0:0:0,-6.92369,-10 0/0:52.5027:14:14:530:0:0:0,-4.21442,-10 0/1:99:16:11:406:5:190:-10,0,-10 0/0:31.4306:7:7:261:0:0:0,-2.10721,-10 0/0:52.5027:14:14:484:0:0:0,-4.21442,-10 0/0:55.513:15:15:567:0:0:0,-4.51545,-10 0/0:19.3894:3:3:110:0:0:0,-0.90309,-10 0/0:67.5542:19:19:717:0:0:0,-5.71957,-10 0/0:76.5851:22:22:794:0:0:0,-6.62266,-10 0/0:49.4924:13:13:458:0:0:0,-3.91339,-10 scaffold_46 2192272 . T C 1179.24 . AB=0.519231;ABP=3.17734;AC=5;AF=0.0271739;AN=184;AO=48;CIGAR=1X;DP=1465;DPB=1465;DPRA=1.08513;EPP=3.0103;EPPR=3.82096;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9555;NS=92;NUMALT=1;ODDS=0.0838913;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1786;QR=51480;RO=1417;RPP=107.241;RPPR=3079.99;RUN=1;SAF=24;SAP=3.0103;SAR=24;SRF=720;SRP=3.82096;SRR=697;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.1435:11:11:409:0:0:0,-3.31133,-10 0/0:62.1847:15:15:536:0:0:0,-4.51545,-10 0/0:62.1847:15:15:537:0:0:0,-4.51545,-10 0/0:50.1435:11:11:393:0:0:0,-3.31133,-10 0/0:53.1538:12:12:429:0:0:0,-3.61236,-10 0/0:41.1126:8:8:302:0:0:0,-2.40824,-10 0/0:99:33:33:1206:0:0:0,-9.93399,-10 0/0:74.2259:19:19:672:0:0:0,-5.71957,-10 0/0:56.1641:13:13:489:0:0:0,-3.91339,-10 0/0:26.0611:3:3:100:0:0:0,-0.90309,-9.33333 0/0:38.1023:7:7:262:0:0:0,-2.10721,-10 0/0:44.1229:9:9:300:0:0:0,-2.70927,-10 0/0:80.2464:21:21:765:0:0:0,-6.32163,-10 0/0:89.2766:24:24:911:0:0:0,-7.22472,-10 0/0:95.2979:26:26:974:0:0:0,-7.82678,-10 0/0:80.2464:21:21:784:0:0:0,-6.32163,-10 0/0:68.2053:17:17:618:0:0:0,-5.11751,-10 0/0:35.092:6:6:227:0:0:0,-1.80618,-10 0/0:59.1744:14:14:517:0:0:0,-4.21442,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:53.1538:12:12:439:0:0:0,-3.61236,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:41.1126:8:8:278:0:0:0,-2.40824,-10 0/0:53.1538:12:12:441:0:0:0,-3.61236,-10 0/0:65.195:16:16:594:0:0:0,-4.81648,-10 0/0:65.195:16:16:582:0:0:0,-4.81648,-10 0/0:53.1538:12:12:455:0:0:0,-3.61236,-10 0/0:41.1126:8:8:281:0:0:0,-2.40824,-10 0/0:65.195:16:16:583:0:0:0,-4.81648,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:26.0611:3:3:91:0:0:0,-0.90309,-8.49333 0/0:56.1641:13:13:478:0:0:0,-3.91339,-10 0/0:83.2568:22:22:814:0:0:0,-6.62266,-10 0/0:59.1744:14:14:523:0:0:0,-4.21442,-10 0/0:44.1229:9:9:311:0:0:0,-2.70927,-10 0/0:38.1023:7:7:261:0:0:0,-2.10721,-10 0/0:47.1332:10:10:371:0:0:0,-3.0103,-10 0/0:99:30:30:1057:0:0:0,-9.0309,-10 0/0:53.1538:12:12:453:0:0:0,-3.61236,-10 0/0:44.1229:9:9:340:0:0:0,-2.70927,-10 0/0:92.286:25:25:917:0:0:0,-7.52575,-10 0/0:59.1744:14:14:490:0:0:0,-4.21442,-10 0/0:71.2156:18:18:660:0:0:0,-5.41854,-10 0/0:77.2362:20:20:690:0:0:0,-6.0206,-10 0/0:50.1435:11:11:391:0:0:0,-3.31133,-10 0/0:0.237233:14:13:414:1:38:-0.731708,0,-10 0/0:98.3014:27:27:1004:0:0:0,-8.12781,-10 0/0:92.286:25:25:900:0:0:0,-7.52575,-10 0/0:38.1023:7:7:261:0:0:0,-2.10721,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:44.1229:9:9:329:0:0:0,-2.70927,-10 0/0:98.3014:27:27:1013:0:0:0,-8.12781,-10 0/0:56.1641:13:13:488:0:0:0,-3.91339,-10 0/0:35.092:6:6:205:0:0:0,-1.80618,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:53.1538:12:12:452:0:0:0,-3.61236,-10 0/0:68.2053:17:17:588:0:0:0,-5.11751,-10 0/0:65.195:16:16:605:0:0:0,-4.81648,-10 0/0:47.1332:10:10:376:0:0:0,-3.0103,-10 0/0:47.1332:10:10:364:0:0:0,-3.0103,-10 0/0:89.2766:24:24:897:0:0:0,-7.22472,-10 0/0:71.2156:18:18:622:0:0:0,-5.41854,-10 0/0:98.3014:27:27:966:0:0:0,-8.12781,-10 0/0:77.2362:20:20:679:0:0:0,-6.0206,-10 0/0:35.092:6:6:228:0:0:0,-1.80618,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:47.1332:10:10:362:0:0:0,-3.0103,-10 0/0:41.1126:8:8:257:0:0:0,-2.40824,-10 0/0:65.195:16:16:583:0:0:0,-4.81648,-10 0/0:53.1538:12:12:456:0:0:0,-3.61236,-10 0/0:68.2053:17:17:595:0:0:0,-5.11751,-10 0/1:99:30:13:482:17:627:-10,0,-10 0/0:71.2156:18:18:616:0:0:0,-5.41854,-10 0/1:0.00349261:9:0:0:9:333:-10,-2.70927,0 1/1:14.4355:20:0:0:20:750:-10,-6.0206,0 0/0:41.1126:8:8:268:0:0:0,-2.40824,-10 0/0:56.1641:13:13:492:0:0:0,-3.91339,-10 0/0:59.1744:14:14:431:0:0:0,-4.21442,-10 0/0:29.0714:4:4:140:0:0:0,-1.20412,-10 0/0:32.0817:5:5:168:0:0:0,-1.50515,-10 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:98.3014:27:27:985:0:0:0,-8.12781,-10 0/0:86.2667:23:23:865:0:0:0,-6.92369,-10 0/0:59.1744:14:14:529:0:0:0,-4.21442,-10 0/0:65.195:16:16:580:0:0:0,-4.81648,-10 0/0:38.1023:7:7:259:0:0:0,-2.10721,-10 0/0:59.1744:14:14:487:0:0:0,-4.21442,-10 0/0:62.1847:15:15:567:0:0:0,-4.51545,-10 0/0:26.0611:3:3:114:0:0:0,-0.90309,-10 0/0:74.2259:19:19:676:0:0:0,-5.71957,-10 0/0:83.2568:22:22:807:0:0:0,-6.62266,-10 0/1:3.66118:13:12:434:1:38:-1.00055,0,-10 scaffold_46 2363826 . A G 615.489 . AB=0.75;ABP=22.5536;AC=3;AF=0.0163043;AN=184;AO=27;CIGAR=1X;DP=1142;DPB=1142;DPRA=0.965642;EPP=5.02092;EPPR=3.86915;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.93;NS=92;NUMALT=1;ODDS=3.92395;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=974;QR=40778;RO=1115;RPP=61.6401;RPPR=2424.2;RUN=1;SAF=11;SAP=5.02092;SAR=16;SRF=568;SRP=3.86915;SRR=547;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:29.4615:5:5:169:0:0:0,-1.50515,-10 0/0:38.4924:8:8:302:0:0:0,-2.40824,-10 0/0:47.5233:11:11:390:0:0:0,-3.31133,-10 0/0:59.5645:15:15:537:0:0:0,-4.51545,-10 0/0:62.5748:16:16:608:0:0:0,-4.81648,-10 0/0:23.4409:3:3:114:0:0:0,-0.90309,-10 0/0:98.6993:28:28:1017:0:0:0,-8.42884,-10 0/0:65.5851:17:17:637:0:0:0,-5.11751,-10 0/0:44.513:10:10:380:0:0:0,-3.0103,-10 0/0:17.4203:1:1:38:0:0:0,-0.30103,-3.8 0/0:29.4615:5:5:180:0:0:0,-1.50515,-10 0/0:20.4306:2:2:76:0:0:0,-0.60206,-7.22 0/0:80.6366:22:22:809:0:0:0,-6.62266,-10 0/0:56.5542:14:14:506:0:0:0,-4.21442,-10 0/0:77.6263:21:21:793:0:0:0,-6.32163,-10 0/0:71.6057:19:19:721:0:0:0,-5.71957,-10 0/0:59.5645:15:15:521:0:0:0,-4.51545,-10 0/0:35.4821:7:7:244:0:0:0,-2.10721,-10 0/0:44.513:10:10:368:0:0:0,-3.0103,-10 0/0:80.6366:22:22:814:0:0:0,-6.62266,-10 0/0:59.5645:15:15:536:0:0:0,-4.51545,-10 0/0:59.5645:15:15:543:0:0:0,-4.51545,-10 0/0:35.4821:7:7:244:0:0:0,-2.10721,-10 0/0:59.5645:15:15:563:0:0:0,-4.51545,-10 0/0:35.4821:7:7:262:0:0:0,-2.10721,-10 0/0:44.513:10:10:326:0:0:0,-3.0103,-10 0/0:38.4924:8:8:304:0:0:0,-2.40824,-10 0/0:32.4718:6:6:212:0:0:0,-1.80618,-10 0/0:35.4821:7:7:266:0:0:0,-2.10721,-10 0/0:83.6469:23:23:844:0:0:0,-6.92369,-10 0/0:23.4409:3:3:89:0:0:0,-0.90309,-8.30667 0/0:26.4512:4:4:148:0:0:0,-1.20412,-10 0/0:35.4821:7:7:266:0:0:0,-2.10721,-10 0/0:29.4615:5:5:179:0:0:0,-1.50515,-10 0/0:53.5439:13:13:472:0:0:0,-3.91339,-10 0/0:26.4512:4:4:146:0:0:0,-1.20412,-10 0/0:35.4821:7:7:237:0:0:0,-2.10721,-10 0/0:77.6263:21:21:768:0:0:0,-6.32163,-10 0/0:77.6263:21:21:752:0:0:0,-6.32163,-10 0/0:62.5748:16:16:602:0:0:0,-4.81648,-10 0/0:92.678:26:26:959:0:0:0,-7.82678,-10 0/0:59.5645:15:15:564:0:0:0,-4.51545,-10 0/0:47.5233:11:11:407:0:0:0,-3.31133,-10 0/0:53.5439:13:13:467:0:0:0,-3.91339,-10 0/0:50.5336:12:12:391:0:0:0,-3.61236,-10 0/0:32.4718:6:6:228:0:0:0,-1.80618,-10 0/0:92.678:26:26:957:0:0:0,-7.82678,-10 0/0:62.5748:16:16:559:0:0:0,-4.81648,-10 0/0:47.5233:11:11:398:0:0:0,-3.31133,-10 0/0:92.678:26:26:970:0:0:0,-7.82678,-10 0/0:32.4718:6:6:221:0:0:0,-1.80618,-10 0/0:77.6263:21:21:762:0:0:0,-6.32163,-10 0/0:35.4821:7:7:266:0:0:0,-2.10721,-10 0/0:26.4512:4:4:148:0:0:0,-1.20412,-10 0/0:92.678:26:26:956:0:0:0,-7.82678,-10 0/0:26.4512:4:4:152:0:0:0,-1.20412,-10 0/0:50.5336:12:12:426:0:0:0,-3.61236,-10 0/1:0.0239385:12:0:0:12:411:-10,-3.61236,0 0/0:50.5336:12:12:430:0:0:0,-3.61236,-10 0/0:41.5027:9:9:340:0:0:0,-2.70927,-10 0/0:71.6057:19:19:710:0:0:0,-5.71957,-10 0/0:44.513:10:10:352:0:0:0,-3.0103,-10 0/1:99:18:9:332:9:339:-10,0,-10 0/0:62.5748:16:16:570:0:0:0,-4.81648,-10 0/1:0.000373026:6:0:0:6:224:-10,-1.80618,0 0/0:59.5645:15:15:566:0:0:0,-4.51545,-10 0/0:77.6263:21:21:781:0:0:0,-6.32163,-10 0/0:44.513:10:10:375:0:0:0,-3.0103,-10 0/0:62.5748:16:16:596:0:0:0,-4.81648,-10 0/0:44.513:10:10:367:0:0:0,-3.0103,-10 0/0:29.4615:5:5:190:0:0:0,-1.50515,-10 0/0:65.5851:17:17:607:0:0:0,-5.11751,-10 0/0:68.5954:18:18:651:0:0:0,-5.41854,-10 0/0:41.5027:9:9:309:0:0:0,-2.70927,-10 0/0:65.5851:17:17:601:0:0:0,-5.11751,-10 0/0:38.4924:8:8:288:0:0:0,-2.40824,-10 0/0:50.5336:12:12:452:0:0:0,-3.61236,-10 0/0:56.5542:14:14:490:0:0:0,-4.21442,-10 0/0:26.4512:4:4:152:0:0:0,-1.20412,-10 0/0:32.4718:6:6:224:0:0:0,-1.80618,-10 0/0:89.6676:25:25:938:0:0:0,-7.52575,-10 0/0:62.5748:16:16:592:0:0:0,-4.81648,-10 0/0:65.5851:17:17:638:0:0:0,-5.11751,-10 0/0:53.5439:13:13:449:0:0:0,-3.91339,-10 0/0:83.6469:23:23:865:0:0:0,-6.92369,-10 0/0:17.4203:1:1:38:0:0:0,-0.30103,-3.8 0/0:50.5336:12:12:452:0:0:0,-3.61236,-10 0/0:35.4821:7:7:241:0:0:0,-2.10721,-10 0/0:26.4512:4:4:152:0:0:0,-1.20412,-10 0/0:44.513:10:10:374:0:0:0,-3.0103,-10 0/0:50.5336:12:12:448:0:0:0,-3.61236,-10 0/0:47.5233:11:11:394:0:0:0,-3.31133,-10 scaffold_46 2363831 . T C 99.4473 . AB=0.375;ABP=5.18177;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1142;DPB=1142;DPRA=1.09191;EPP=3.25157;EPPR=3.63182;GTI=1;LEN=1;MEANALT=1;MQM=59.7778;MQMR=59.939;NS=92;NUMALT=1;ODDS=1.38392;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=293;QR=41663;RO=1132;RPP=22.5536;RPPR=2461.12;RUN=1;SAF=4;SAP=3.25157;SAR=5;SRF=575;SRP=3.63182;SRR=557;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.5607:5:5:179:0:0:0,-1.50515,-10 0/0:59.5916:8:8:282:0:0:0,-2.40824,-10 0/0:68.6225:11:11:345:0:0:0,-3.31133,-10 0/0:80.6637:15:15:531:0:0:0,-4.51545,-10 0/0:83.674:16:16:561:0:0:0,-4.81648,-10 0/0:44.5401:3:3:114:0:0:0,-0.90309,-10 0/0:99:28:27:987:0:0:0,-8.12781,-10 0/0:86.6843:17:17:644:0:0:0,-5.11751,-10 0/0:65.6122:10:10:377:0:0:0,-3.0103,-10 0/0:38.5195:1:1:38:0:0:0,-0.30103,-3.8 0/0:50.5607:5:5:168:0:0:0,-1.50515,-10 0/0:41.5298:2:2:72:0:0:0,-0.60206,-6.84 0/0:99:22:22:768:0:0:0,-6.62266,-10 0/0:77.6534:14:14:482:0:0:0,-4.21442,-10 0/0:98.7244:21:21:794:0:0:0,-6.32163,-10 0/0:92.7047:19:19:718:0:0:0,-5.71957,-10 0/0:52.0978:15:14:527:1:16:0,-1.73936,-10 0/0:56.5813:7:7:260:0:0:0,-2.10721,-10 0/0:65.6122:10:10:369:0:0:0,-3.0103,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:80.6637:15:15:561:0:0:0,-4.51545,-10 0/0:80.6637:15:15:547:0:0:0,-4.51545,-10 0/0:56.5813:7:7:258:0:0:0,-2.10721,-10 0/0:80.6637:15:15:557:0:0:0,-4.51545,-10 0/0:56.5813:7:7:257:0:0:0,-2.10721,-10 0/0:65.6122:10:10:368:0:0:0,-3.0103,-10 0/0:59.5916:8:8:304:0:0:0,-2.40824,-10 0/0:53.571:6:6:206:0:0:0,-1.80618,-10 0/0:56.5813:7:7:266:0:0:0,-2.10721,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:44.5401:3:3:113:0:0:0,-0.90309,-10 0/0:47.5504:4:4:145:0:0:0,-1.20412,-10 0/0:56.5813:7:7:266:0:0:0,-2.10721,-10 0/0:50.5607:5:5:189:0:0:0,-1.50515,-10 0/0:74.6431:13:13:466:0:0:0,-3.91339,-10 0/0:47.5504:4:4:129:0:0:0,-1.20412,-10 0/0:56.5813:7:7:233:0:0:0,-2.10721,-10 0/0:98.7244:21:21:781:0:0:0,-6.32163,-10 0/0:98.7244:21:21:793:0:0:0,-6.32163,-10 0/0:83.674:16:16:600:0:0:0,-4.81648,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:80.6637:15:15:558:0:0:0,-4.51545,-10 0/0:68.6225:11:11:416:0:0:0,-3.31133,-10 0/0:74.6431:13:13:485:0:0:0,-3.91339,-10 0/0:71.6328:12:12:408:0:0:0,-3.61236,-10 0/0:53.571:6:6:226:0:0:0,-1.80618,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:83.674:16:16:596:0:0:0,-4.81648,-10 0/0:68.6225:11:11:401:0:0:0,-3.31133,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:53.571:6:6:217:0:0:0,-1.80618,-10 0/0:98.7244:21:21:776:0:0:0,-6.32163,-10 0/0:56.5813:7:7:262:0:0:0,-2.10721,-10 0/0:47.5504:4:4:150:0:0:0,-1.20412,-10 0/0:99:26:26:985:0:0:0,-7.82678,-10 0/0:47.5504:4:4:152:0:0:0,-1.20412,-10 0/0:71.6328:12:12:455:0:0:0,-3.61236,-10 0/0:71.6328:12:12:448:0:0:0,-3.61236,-10 0/0:71.6328:12:12:425:0:0:0,-3.61236,-10 0/0:62.6019:9:9:335:0:0:0,-2.70927,-10 0/0:92.7047:19:19:705:0:0:0,-5.71957,-10 0/0:65.6122:10:10:374:0:0:0,-3.0103,-10 0/0:89.6945:18:18:669:0:0:0,-5.41854,-10 0/0:83.674:16:16:589:0:0:0,-4.81648,-10 0/0:0.9704:6:5:189:1:38:-2.77197,0,-10 0/0:80.6637:15:15:564:0:0:0,-4.51545,-10 0/0:98.7244:21:21:790:0:0:0,-6.32163,-10 0/0:65.6122:10:10:357:0:0:0,-3.0103,-10 0/0:83.674:16:16:578:0:0:0,-4.81648,-10 0/0:65.6122:10:10:365:0:0:0,-3.0103,-10 0/0:50.5607:5:5:190:0:0:0,-1.50515,-10 0/0:40.5748:17:16:604:1:33:0,-0.587061,-10 0/0:89.6945:18:18:629:0:0:0,-5.41854,-10 0/0:62.6019:9:9:326:0:0:0,-2.70927,-10 0/0:86.6843:17:17:620:0:0:0,-5.11751,-10 0/0:59.5916:8:8:300:0:0:0,-2.40824,-10 0/0:71.6328:12:12:451:0:0:0,-3.61236,-10 0/0:77.6534:14:14:518:0:0:0,-4.21442,-10 0/0:47.5504:4:4:145:0:0:0,-1.20412,-10 0/0:53.571:6:6:225:0:0:0,-1.80618,-10 0/0:99:25:25:916:0:0:0,-7.52575,-10 0/1:99:16:10:357:6:206:-10,0,-10 0/0:86.6843:17:17:635:0:0:0,-5.11751,-10 0/0:74.6431:13:13:458:0:0:0,-3.91339,-10 0/0:99:23:23:870:0:0:0,-6.92369,-10 0/0:38.5195:1:1:38:0:0:0,-0.30103,-3.8 0/0:71.6328:12:12:453:0:0:0,-3.61236,-10 0/0:56.5813:7:7:247:0:0:0,-2.10721,-10 0/0:47.5504:4:4:152:0:0:0,-1.20412,-10 0/0:65.6122:10:10:377:0:0:0,-3.0103,-10 0/0:71.6328:12:12:432:0:0:0,-3.61236,-10 0/0:68.6225:11:11:414:0:0:0,-3.31133,-10 scaffold_46 2390706 . C T 2041.65 . AB=0.630435;ABP=16.6056;AC=6;AF=0.0326087;AN=184;AO=80;CIGAR=1X;DP=2365;DPB=2365;DPRA=0.721193;EPP=3.0103;EPPR=5.11139;GTI=3;LEN=1;MEANALT=1;MQM=59.9625;MQMR=59.9982;NS=92;NUMALT=1;ODDS=1.2731;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2938;QR=82958;RO=2283;RPP=176.728;RPPR=4960.48;RUN=1;SAF=40;SAP=3.0103;SAR=40;SRF=1118;SRP=5.11139;SRR=1165;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:79.4262:19:19:695:0:0:0,-5.71957,-10 0/0:67.385:15:15:543:0:0:0,-4.51545,-10 0/0:82.4363:20:20:684:0:0:0,-6.0206,-10 0/0:40.2923:6:6:180:0:0:0,-1.80618,-10 0/0:70.3953:16:16:603:0:0:0,-4.81648,-10 0/0:67.385:15:15:539:0:0:0,-4.51545,-10 0/0:99:48:48:1794:0:0:0,-10,-10 0/0:99:31:31:1104:0:0:0,-9.33193,-10 0/0:38.2729:17:16:582:1:25:0,-1.38706,-10 0/0:37.282:5:5:183:0:0:0,-1.50515,-10 0/0:0.0344477:7:6:227:1:16:-0.337888,0,-10 0/0:67.385:15:15:548:0:0:0,-4.51545,-10 0/0:99:49:49:1760:0:0:0,-10,-10 0/0:99:55:55:1984:0:0:0,-10,-10 0/0:99:34:34:1252:0:0:0,-10,-10 0/0:99:36:36:1347:0:0:0,-10,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:73.4056:17:17:630:0:0:0,-5.11751,-10 0/0:88.4565:22:22:794:0:0:0,-6.62266,-10 0/0:99:53:53:1962:0:0:0,-10,-10 0/0:99:33:33:1180:0:0:0,-9.93399,-10 0/0:99:45:45:1646:0:0:0,-10,-10 0/0:58.3541:12:12:446:0:0:0,-3.61236,-10 0/0:79.4262:19:19:672:0:0:0,-5.71957,-10 0/0:99:37:37:1316:0:0:0,-10,-10 0/0:91.4662:23:23:828:0:0:0,-6.92369,-10 0/0:99:40:40:1508:0:0:0,-10,-10 0/0:70.3953:16:16:591:0:0:0,-4.81648,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:46.3129:8:8:301:0:0:0,-2.40824,-10 0/0:49.3232:9:9:342:0:0:0,-2.70927,-10 0/0:82.4363:20:20:707:0:0:0,-6.0206,-10 0/0:61.3644:13:13:477:0:0:0,-3.91339,-10 0/0:99:33:33:1173:0:0:0,-9.93399,-10 0/0:49.3232:9:9:330:0:0:0,-2.70927,-10 0/0:49.3232:9:9:304:0:0:0,-2.70927,-10 0/0:99:44:44:1590:0:0:0,-10,-10 0/0:85.4465:21:21:797:0:0:0,-6.32163,-10 0/0:76.4159:18:18:678:0:0:0,-5.41854,-10 0/0:99:46:46:1743:0:0:0,-10,-10 0/0:79.4262:19:19:701:0:0:0,-5.71957,-10 0/0:99:33:33:1181:0:0:0,-9.93399,-10 0/0:99:52:52:1783:0:0:0,-10,-10 0/0:82.4363:20:20:743:0:0:0,-6.0206,-10 0/0:88.4565:22:22:775:0:0:0,-6.62266,-10 0/0:99:56:56:1982:0:0:0,-10,-10 0/0:99:42:42:1560:0:0:0,-10,-10 0/0:73.4056:17:17:597:0:0:0,-5.11751,-10 0/0:99:51:50:1766:0:0:0,-10,-10 0/0:99:26:26:960:0:0:0,-7.82678,-10 0/0:99:56:56:2047:0:0:0,-10,-10 0/0:67.385:15:15:557:0:0:0,-4.51545,-10 0/0:58.3541:12:12:456:0:0:0,-3.61236,-10 0/0:99:58:58:2116:0:0:0,-10,-10 0/0:55.3438:11:11:405:0:0:0,-3.31133,-10 0/0:99:28:28:985:0:0:0,-8.42884,-10 0/0:55.3438:11:11:371:0:0:0,-3.31133,-10 0/0:91.4662:23:23:799:0:0:0,-6.92369,-10 0/0:52.3335:10:10:379:0:0:0,-3.0103,-10 0/0:99:38:38:1401:0:0:0,-10,-10 0/0:91.4662:23:23:804:0:0:0,-6.92369,-10 0/0:99:45:44:1587:0:0:0,-10,-10 0/0:99:27:27:919:0:0:0,-8.12781,-10 0/0:52.3335:10:10:372:0:0:0,-3.0103,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:99:31:31:1165:0:0:0,-9.33193,-10 0/1:0.0815796:13:0:0:13:483:-10,-3.91339,0 0/1:99:39:19:669:20:730:-10,0,-10 0/1:0.0815796:13:0:0:13:494:-10,-3.91339,0 0/0:91.4662:23:23:867:0:0:0,-6.92369,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:99:34:34:1193:0:0:0,-10,-10 0/0:73.4056:17:17:637:0:0:0,-5.11751,-10 0/0:99:29:29:1096:0:0:0,-8.72987,-10 1/1:6.81841:19:0:0:19:699:-10,-5.71957,0 0/0:61.3644:13:13:489:0:0:0,-3.91339,-10 0/0:25.2729:17:16:583:1:38:0,-0.087061,-10 0/0:40.2923:6:6:228:0:0:0,-1.80618,-10 0/0:55.3438:11:11:384:0:0:0,-3.31133,-10 0/0:99:33:33:1186:0:0:0,-9.93399,-10 0/0:99:42:42:1529:0:0:0,-10,-10 0/0:99:29:29:1045:0:0:0,-8.72987,-10 0/0:99:38:38:1423:0:0:0,-10,-10 0/1:99:27:15:560:12:453:-10,0,-10 0/0:40.2923:6:6:226:0:0:0,-1.80618,-10 0/0:73.4056:17:17:585:0:0:0,-5.11751,-10 0/0:70.3953:16:16:579:0:0:0,-4.81648,-10 0/0:43.3026:7:7:261:0:0:0,-2.10721,-10 0/0:99:29:29:1097:0:0:0,-8.72987,-10 0/0:94.4753:24:24:834:0:0:0,-7.22472,-10 0/0:99:34:34:1261:0:0:0,-10,-10 scaffold_46 2725737 . C T 3254.55 . AB=0.622951;ABP=11.0198;AC=15;AF=0.0815217;AN=184;AO=128;CIGAR=1X;DP=1603;DPB=1603;DPRA=0.765778;EPP=20.3821;EPPR=3.02355;GTI=4;LEN=1;MEANALT=1;MQM=60;MQMR=59.9912;NS=92;NUMALT=1;ODDS=1.44527;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4601;QR=52706;RO=1475;RPP=280.959;RPPR=3205.93;RUN=1;SAF=48;SAP=20.3821;SAR=80;SRF=739;SRP=3.02355;SRR=736;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:93.9521:11:2:76:9:318:-10,0,-5.64903 0/1:0.00152368:3:0:0:3:114:-10,-0.90309,0 1/1:13.906:16:0:0:16:529:-10,-4.81648,0 0/0:47.9056:12:12:439:0:0:0,-3.61236,-10 0/0:38.8747:9:9:288:0:0:0,-2.70927,-10 0/0:26.8335:5:5:185:0:0:0,-1.50515,-10 0/0:99:36:36:1266:0:0:0,-10,-10 0/0:81.0188:23:23:809:0:0:0,-6.92369,-10 0/0:56.9365:15:15:562:0:0:0,-4.51545,-10 0/0:14.7923:1:1:38:0:0:0,-0.30103,-3.8 0/0:26.8335:5:5:163:0:0:0,-1.50515,-10 0/0:35.8644:8:8:303:0:0:0,-2.40824,-10 0/0:84.029:24:24:865:0:0:0,-7.22472,-10 0/0:99:36:36:1301:0:0:0,-10,-10 0/0:99:32:32:1176:0:0:0,-9.63296,-10 0/0:81.0188:23:23:804:0:0:0,-6.92369,-10 0/0:78.0086:22:22:813:0:0:0,-6.62266,-10 0/0:50.9159:13:13:472:0:0:0,-3.91339,-10 0/0:56.9365:15:15:521:0:0:0,-4.51545,-10 0/0:99:37:37:1320:0:0:0,-10,-10 0/0:38.8747:9:9:335:0:0:0,-2.70927,-10 0/0:74.9983:21:21:777:0:0:0,-6.32163,-10 0/0:32.8541:7:7:262:0:0:0,-2.10721,-10 0/0:81.0188:23:23:850:0:0:0,-6.92369,-10 0/0:81.0188:23:23:817:0:0:0,-6.92369,-10 0/0:71.988:20:20:713:0:0:0,-6.0206,-10 0/0:47.9056:12:12:423:0:0:0,-3.61236,-10 0/0:44.8953:11:11:381:0:0:0,-3.31133,-10 0/0:44.8953:11:11:396:0:0:0,-3.31133,-10 0/0:71.988:20:20:737:0:0:0,-6.0206,-10 0/0:29.8438:6:6:215:0:0:0,-1.80618,-10 0/0:14.7921:1:1:14:0:0:0,-0.30103,-1.4 0/0:62.9571:17:17:597:0:0:0,-5.11751,-10 0/0:47.9056:12:12:450:0:0:0,-3.61236,-10 0/0:50.9159:13:13:451:0:0:0,-3.91339,-10 0/0:29.8438:6:6:210:0:0:0,-1.80618,-10 0/0:23.8232:4:4:143:0:0:0,-1.20412,-10 0/0:99:29:29:994:0:0:0,-8.72987,-10 0/0:71.988:20:20:677:0:0:0,-6.0206,-10 0/0:65.9674:18:18:638:0:0:0,-5.41854,-10 0/0:59.9468:16:16:607:0:0:0,-4.81648,-10 0/0:78.0086:22:22:755:0:0:0,-6.62266,-10 0/0:65.9674:18:18:667:0:0:0,-5.41854,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:50.9159:13:13:486:0:0:0,-3.91339,-10 0/0:53.9262:14:14:509:0:0:0,-4.21442,-10 0/0:99:45:45:1611:0:0:0,-10,-10 0/0:71.988:20:20:716:0:0:0,-6.0206,-10 0/0:41.885:10:10:348:0:0:0,-3.0103,-10 0/0:96.0716:28:28:947:0:0:0,-8.42884,-10 0/0:29.8438:6:6:203:0:0:0,-1.80618,-10 0/0:99:32:32:1148:0:0:0,-9.63296,-10 0/0:41.885:10:10:346:0:0:0,-3.0103,-10 0/0:38.8747:9:9:286:0:0:0,-2.70927,-10 0/0:99:40:40:1367:0:0:0,-10,-10 0/0:41.885:10:10:374:0:0:0,-3.0103,-10 0/0:68.9777:19:19:683:0:0:0,-5.71957,-10 0/0:23.8232:4:4:152:0:0:0,-1.20412,-10 0/0:65.9674:18:18:617:0:0:0,-5.41854,-10 0/0:56.9365:15:15:531:0:0:0,-4.51545,-10 0/0:99:33:33:1219:0:0:0,-9.93399,-10 0/0:59.9468:16:16:535:0:0:0,-4.81648,-10 0/0:99:54:54:1970:0:0:0,-10,-10 0/0:84.029:24:24:808:0:0:0,-7.22472,-10 0/0:35.8644:8:8:295:0:0:0,-2.40824,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:74.9983:21:21:791:0:0:0,-6.32163,-10 0/0:44.8953:11:11:403:0:0:0,-3.31133,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:35.8644:8:8:277:0:0:0,-2.40824,-10 0/0:90.0501:26:26:889:0:0:0,-7.82678,-10 0/0:59.9468:16:16:588:0:0:0,-4.81648,-10 0/0:78.0086:22:22:809:0:0:0,-6.62266,-10 0/0:32.8541:7:7:262:0:0:0,-2.10721,-10 0/0:99:33:33:1149:0:0:0,-9.93399,-10 0/0:65.9674:18:18:656:0:0:0,-5.41854,-10 0/0:47.9056:12:12:424:0:0:0,-3.61236,-10 0/0:56.9365:15:15:517:0:0:0,-4.51545,-10 0/1:0.000380869:1:0:0:1:36:-3.6,-0.30103,0 0/1:0.0244432:7:0:0:7:244:-10,-2.10721,0 1/1:92.1727:42:0:0:42:1527:-10,-10,0 1/1:7.88543:14:0:0:14:504:-10,-4.21442,0 0/0:81.0188:23:23:832:0:0:0,-6.92369,-10 0/1:99:12:8:303:4:151:-10,0,-10 0/0:65.9674:18:18:641:0:0:0,-5.41854,-10 0/0:32.8541:7:7:241:0:0:0,-2.10721,-10 0/0:50.9159:13:13:463:0:0:0,-3.91339,-10 0/0:38.8747:9:9:341:0:0:0,-2.70927,-10 0/1:0.0122044:6:0:0:6:219:-10,-1.80618,0 0/1:99:21:13:493:8:301:-10,0,-10 1/1:19.9266:18:0:0:18:658:-10,-5.41854,0 0/0:56.9365:15:15:511:0:0:0,-4.51545,-10 scaffold_46 2833198 . A C 5674.01 . AB=0.559322;ABP=4.81373;AC=18;AF=0.0978261;AN=184;AO=208;CIGAR=1X;DP=1900;DPB=1900;DPRA=1.03427;EPP=5.0565;EPPR=4.49564;GTI=2;LEN=1;MEANALT=1;MQM=59.5625;MQMR=59.955;NS=92;NUMALT=1;ODDS=0.0854783;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7650;QR=62357;RO=1690;RPP=454.677;RPPR=3672.8;RUN=1;SAF=111;SAP=5.0565;SAR=97;SRF=862;SRP=4.49564;SRR=828;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:23.4366:19:0:0:19:708:-10,-5.71957,0 1/1:14.4057:16:0:0:16:587:-10,-4.81648,0 1/1:32.4675:22:0:0:22:822:-10,-6.62266,0 0/0:59.2839:20:20:747:0:0:0,-6.0206,-10 0/0:50.253:17:17:623:0:0:0,-5.11751,-10 0/0:26.1706:9:9:338:0:0:0,-2.70927,-10 0/0:86.3763:29:29:1069:0:0:0,-8.72987,-10 0/0:99:36:36:1293:0:0:0,-10,-10 0/0:35.2015:12:12:441:0:0:0,-3.61236,-10 0/0:11.1191:4:4:152:0:0:0,-1.20412,-10 0/0:26.1706:9:9:342:0:0:0,-2.70927,-10 0/0:38.2118:13:13:466:0:0:0,-3.91339,-10 0/0:92.3962:31:31:1151:0:0:0,-9.33193,-10 0/0:71.3251:24:24:902:0:0:0,-7.22472,-10 0/0:86.3763:29:29:1085:0:0:0,-8.72987,-10 0/0:83.3662:28:28:1039:0:0:0,-8.42884,-10 0/0:65.3045:22:22:831:0:0:0,-6.62266,-10 0/0:26.1706:9:9:342:0:0:0,-2.70927,-10 0/0:59.2839:20:20:709:0:0:0,-6.0206,-10 0/0:99:36:35:1296:0:0:0,-10,-10 0/0:68.3148:23:23:822:0:0:0,-6.92369,-10 0/0:86.3763:29:29:1099:0:0:0,-8.72987,-10 0/0:11.1191:4:4:129:0:0:0,-1.20412,-10 0/0:68.3148:23:23:861:0:0:0,-6.92369,-10 0/0:59.2839:20:20:716:0:0:0,-6.0206,-10 0/0:92.3962:32:31:1113:0:0:0,-9.33193,-10 0/0:62.2942:21:21:788:0:0:0,-6.32163,-10 0/0:47.2427:16:16:561:0:0:0,-4.81648,-10 0/0:68.3148:23:23:872:0:0:0,-6.92369,-10 0/0:98.414:33:33:1226:0:0:0,-9.93399,-10 0/0:41.2221:14:14:494:0:0:0,-4.21442,-10 0/0:17.1397:6:6:228:0:0:0,-1.80618,-10 0/0:47.2427:16:16:596:0:0:0,-4.81648,-10 0/0:41.2221:14:14:514:0:0:0,-4.21442,-10 0/0:38.2118:13:13:486:0:0:0,-3.91339,-10 0/0:11.1191:4:4:152:0:0:0,-1.20412,-10 0/0:29.1809:10:10:377:0:0:0,-3.0103,-10 0/0:92.3962:31:31:1168:0:0:0,-9.33193,-10 0/0:41.2221:14:14:504:0:0:0,-4.21442,-10 0/0:29.1809:10:10:377:0:0:0,-3.0103,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:50.253:17:17:622:0:0:0,-5.11751,-10 0/0:56.2736:19:19:719:0:0:0,-5.71957,-10 0/0:99:42:42:1527:0:0:0,-10,-10 0/0:71.3251:24:24:900:0:0:0,-7.22472,-10 0/0:50.253:17:17:621:0:0:0,-5.11751,-10 0/0:99:44:44:1644:0:0:0,-10,-10 0/0:65.3045:22:22:828:0:0:0,-6.62266,-10 0/0:65.3045:22:22:821:0:0:0,-6.62266,-10 0/0:99:34:34:1235:0:0:0,-10,-10 0/0:50.253:17:17:646:0:0:0,-5.11751,-10 0/0:99:39:39:1452:0:0:0,-10,-10 0/0:32.1912:11:11:388:0:0:0,-3.31133,-10 0/0:20.15:7:7:256:0:0:0,-2.10721,-10 0/0:99:44:44:1582:0:0:0,-10,-10 0/0:50.253:17:17:641:0:0:0,-5.11751,-10 0/0:65.3045:22:22:827:0:0:0,-6.62266,-10 0/0:32.1912:11:11:405:0:0:0,-3.31133,-10 0/0:86.3763:29:29:1094:0:0:0,-8.72987,-10 0/0:44.2324:15:15:570:0:0:0,-4.51545,-10 0/0:59.2839:20:20:746:0:0:0,-6.0206,-10 0/0:53.2633:18:18:648:0:0:0,-5.41854,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:41.2221:14:14:530:0:0:0,-4.21442,-10 0/0:38.2118:13:13:472:0:0:0,-3.91339,-10 0/0:74.3354:25:25:923:0:0:0,-7.52575,-10 0/0:68.3148:23:23:866:0:0:0,-6.92369,-10 0/0:20.15:7:7:236:0:0:0,-2.10721,-10 0/0:95.4056:32:32:1165:0:0:0,-9.63296,-10 0/0:14.1294:5:5:189:0:0:0,-1.50515,-10 0/0:62.2942:21:21:767:0:0:0,-6.32163,-10 0/0:98.414:33:33:1192:0:0:0,-9.93399,-10 0/0:62.2942:21:21:788:0:0:0,-6.32163,-10 0/0:47.2427:16:16:603:0:0:0,-4.81648,-10 0/0:95.4056:32:32:1151:0:0:0,-9.63296,-10 0/0:41.2221:14:14:499:0:0:0,-4.21442,-10 0/0:68.3148:23:23:860:0:0:0,-6.92369,-10 0/0:23.1603:8:8:304:0:0:0,-2.40824,-10 0/1:0.0101169:8:0:0:8:301:-10,-2.40824,0 1/1:5.37475:13:0:0:13:494:-10,-3.91339,0 1/1:86.6526:40:0:0:40:1464:-10,-10,0 1/1:62.5704:32:0:0:32:1140:-10,-9.63296,0 0/0:89.3864:30:30:1071:0:0:0,-9.0309,-10 0/1:99:28:17:645:11:418:-10,0,-10 0/0:68.3148:23:23:824:0:0:0,-6.92369,-10 0/0:17.1397:6:6:224:0:0:0,-1.80618,-10 0/0:74.3354:25:25:918:0:0:0,-7.52575,-10 0/0:53.2633:18:18:670:0:0:0,-5.41854,-10 0/1:0.0202574:9:0:0:9:334:-10,-2.70927,0 0/1:99:14:9:342:5:142:-10,0,-10 1/1:65.5807:33:0:0:33:1240:-10,-9.93399,0 0/0:38.2118:13:13:467:0:0:0,-3.91339,-10 scaffold_46 2953983 . G A 134.284 . AB=0.32;ABP=10.0459;AC=1;AF=0.00555556;AN=180;AO=10;CIGAR=1X;DP=1537;DPB=1537;DPRA=0.954973;EPP=6.48466;EPPR=4.85449;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9201;NS=90;NUMALT=1;ODDS=6.3974;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=53715;RO=1526;RPP=24.725;RPPR=3316.68;RUN=1;SAF=7;SAP=6.48466;SAR=3;SRF=745;SRP=4.85449;SRR=781;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:80.7605:14:14:527:0:0:0,-4.21442,-10 0/0:59.6884:7:7:255:0:0:0,-2.10721,-10 0/0:95.8098:19:19:716:0:0:0,-5.71957,-10 0/0:56.6781:6:6:159:0:0:0,-1.80618,-10 0/0:68.7193:10:10:359:0:0:0,-3.0103,-10 0/0:59.6884:7:7:243:0:0:0,-2.10721,-10 0/0:99:31:31:1092:0:0:0,-9.33193,-10 0/0:83.7707:15:15:539:0:0:0,-4.51545,-10 0/0:71.7296:11:11:412:0:0:0,-3.31133,-10 0/0:59.6884:7:7:222:0:0:0,-2.10721,-10 0/0:65.709:9:9:319:0:0:0,-2.70927,-10 0/0:47.6472:3:3:114:0:0:0,-0.90309,-10 0/0:99:24:24:842:0:0:0,-7.22472,-10 0/0:99:24:24:847:0:0:0,-7.22472,-10 0/0:99:37:37:1268:0:0:0,-10,-10 0/0:74.7399:12:12:449:0:0:0,-3.61236,-10 0/1:99:25:17:612:8:267:-10,0,-10 0/0:59.6884:8:7:233:0:0:0,-2.10721,-10 0/0:86.7808:16:16:546:0:0:0,-4.81648,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:99:27:27:962:0:0:0,-8.12781,-10 0/0:99:22:22:807:0:0:0,-6.62266,-10 0/0:47.6472:3:3:109:0:0:0,-0.90309,-10 0/0:99:24:24:833:0:0:0,-7.22472,-10 0/0:71.7296:11:11:372:0:0:0,-3.31133,-10 0/0:99:26:26:896:0:0:0,-7.82678,-10 0/0:98.818:20:20:666:0:0:0,-6.0206,-10 0/0:89.7909:17:17:606:0:0:0,-5.11751,-10 0/0:77.7502:13:13:419:0:0:0,-3.91339,-10 0/0:99:23:23:836:0:0:0,-6.92369,-10 0/0:62.6987:8:8:244:0:0:0,-2.40824,-10 0/0:0.00722829:10:9:308:1:35:-1.4897,0,-10 0/0:92.8006:18:18:584:0:0:0,-5.41854,-10 0/0:65.709:9:9:315:0:0:0,-2.70927,-10 0/0:92.8006:18:18:660:0:0:0,-5.41854,-10 0/0:56.6781:6:6:204:0:0:0,-1.80618,-10 0/0:77.7502:13:13:448:0:0:0,-3.91339,-10 0/0:99:30:30:1112:0:0:0,-9.0309,-10 0/0:98.818:20:20:749:0:0:0,-6.0206,-10 0/0:77.7502:13:13:407:0:0:0,-3.91339,-10 0/0:99:25:25:866:0:0:0,-7.52575,-10 0/0:74.7399:12:12:391:0:0:0,-3.61236,-10 0/0:77.7502:13:13:461:0:0:0,-3.91339,-10 0/0:99:36:36:1263:0:0:0,-10,-10 0/0:99:26:26:894:0:0:0,-7.82678,-10 0/0:62.6987:8:8:281:0:0:0,-2.40824,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:71.7296:11:11:379:0:0:0,-3.31133,-10 0/0:86.7808:16:16:573:0:0:0,-4.81648,-10 0/0:99:38:38:1219:0:0:0,-10,-10 0/0:86.7808:16:16:592:0:0:0,-4.81648,-10 0/0:99:26:26:941:0:0:0,-7.82678,-10 0/0:99:21:21:732:0:0:0,-6.32163,-10 0/0:59.6884:7:7:253:0:0:0,-2.10721,-10 0/0:99:30:30:1016:0:0:0,-9.0309,-10 0/0:83.7707:15:15:519:0:0:0,-4.51545,-10 0/0:95.8098:19:19:712:0:0:0,-5.71957,-10 0/0:65.709:9:9:316:0:0:0,-2.70927,-10 0/0:71.7296:11:11:411:0:0:0,-3.31133,-10 0/0:68.7193:10:10:354:0:0:0,-3.0103,-10 0/0:99:24:24:885:0:0:0,-7.22472,-10 0/0:99:24:24:862:0:0:0,-7.22472,-10 0/0:99:33:33:1153:0:0:0,-9.93399,-10 0/0:89.7909:17:17:609:0:0:0,-5.11751,-10 0/0:74.7399:12:12:414:0:0:0,-3.61236,-10 0/0:99:36:36:1276:0:0:0,-10,-10 0/0:86.7808:16:16:586:0:0:0,-4.81648,-10 0/0:65.709:9:9:302:0:0:0,-2.70927,-10 0/0:99:35:35:1228:0:0:0,-10,-10 0/0:56.6781:6:6:219:0:0:0,-1.80618,-10 .:.:.:.:.:.:.:. 0/0:99:34:34:1149:0:0:0,-10,-10 0/0:95.8098:19:19:681:0:0:0,-5.71957,-10 .:.:.:.:.:.:.:. 0/0:80.7605:14:14:477:0:0:0,-4.21442,-10 0/0:71.7296:11:11:396:0:0:0,-3.31133,-10 0/0:68.7193:10:10:348:0:0:0,-3.0103,-10 0/0:68.7193:10:10:322:0:0:0,-3.0103,-10 0/0:56.6781:6:6:226:0:0:0,-1.80618,-10 0/0:68.7193:10:10:347:0:0:0,-3.0103,-10 0/0:99:25:25:861:0:0:0,-7.52575,-10 0/0:99:22:22:791:0:0:0,-6.62266,-10 0/0:99:22:22:803:0:0:0,-6.62266,-10 0/0:99:24:24:866:0:0:0,-7.22472,-10 0/0:51.0115:14:13:464:1:15:0,-1.56829,-10 0/0:50.6575:4:4:126:0:0:0,-1.20412,-10 0/0:83.7707:15:15:511:0:0:0,-4.51545,-10 0/0:53.6678:5:5:190:0:0:0,-1.50515,-10 0/0:80.7605:14:14:472:0:0:0,-4.21442,-10 0/0:68.7193:10:10:370:0:0:0,-3.0103,-10 0/0:95.8098:19:19:710:0:0:0,-5.71957,-10 0/0:80.7605:14:14:491:0:0:0,-4.21442,-10 scaffold_46 2973048 . A G 175.194 . AB=0.470588;ABP=3.13803;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1557;DPB=1557;DPRA=1.00455;EPP=4.09604;EPPR=31.7139;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9612;NS=92;NUMALT=1;ODDS=9.53282;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=56943;RO=1547;RPP=20.3821;RPPR=3173.91;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=724;SRP=16.7676;SRR=823;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.5146:12:12:441:0:0:0,-3.61236,-10 0/0:53.4425:5:5:177:0:0:0,-1.50515,-10 0/0:74.5146:12:12:428:0:0:0,-3.61236,-10 0/0:59.4631:7:7:266:0:0:0,-2.10721,-10 0/0:62.4734:8:8:297:0:0:0,-2.40824,-10 0/0:53.4425:5:5:190:0:0:0,-1.50515,-10 0/0:99:39:39:1448:0:0:0,-10,-10 0/0:92.5755:18:18:649:0:0:0,-5.41854,-10 0/0:65.4837:9:9:338:0:0:0,-2.70927,-10 0/0:53.4425:5:5:190:0:0:0,-1.50515,-10 0/0:56.4528:6:6:228:0:0:0,-1.80618,-10 0/0:41.4013:1:1:38:0:0:0,-0.30103,-3.8 0/0:77.5249:13:13:469:0:0:0,-3.91339,-10 0/0:99:35:35:1304:0:0:0,-10,-10 0/0:99:23:23:846:0:0:0,-6.92369,-10 0/0:95.585:19:19:703:0:0:0,-5.71957,-10 0/1:99:17:9:316:8:297:-10,0,-10 0/0:59.4631:7:7:266:0:0:0,-2.10721,-10 0/0:99:23:23:856:0:0:0,-6.92369,-10 0/0:99:33:33:1247:0:0:0,-9.93399,-10 0/0:80.5351:14:14:509:0:0:0,-4.21442,-10 0/0:99:29:29:1057:0:0:0,-8.72987,-10 0/0:68.494:10:10:334:0:0:0,-3.0103,-10 0/0:86.5558:16:16:544:0:0:0,-4.81648,-10 0/0:99:23:23:848:0:0:0,-6.92369,-10 0/0:99:25:25:894:0:0:0,-7.52575,-10 0/0:92.5755:18:18:641:0:0:0,-5.41854,-10 0/0:74.5146:12:12:453:0:0:0,-3.61236,-10 0/0:99:26:26:960:0:0:0,-7.82678,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:44.4116:2:2:76:0:0:0,-0.60206,-7.22 0/0:65.4837:9:9:334:0:0:0,-2.70927,-10 0/0:89.5657:17:17:619:0:0:0,-5.11751,-10 0/0:59.4631:7:7:265:0:0:0,-2.10721,-10 0/0:77.5249:13:13:470:0:0:0,-3.91339,-10 0/0:59.4631:7:7:256:0:0:0,-2.10721,-10 0/0:74.5146:12:12:421:0:0:0,-3.61236,-10 0/0:99:25:25:931:0:0:0,-7.52575,-10 0/0:80.5351:14:14:481:0:0:0,-4.21442,-10 0/0:99:21:21:780:0:0:0,-6.32163,-10 0/0:99:25:25:932:0:0:0,-7.52575,-10 0/0:74.5146:12:12:432:0:0:0,-3.61236,-10 0/0:89.5657:17:17:622:0:0:0,-5.11751,-10 0/0:99:40:40:1493:0:0:0,-10,-10 0/0:89.5657:17:17:644:0:0:0,-5.11751,-10 0/0:77.5249:13:13:488:0:0:0,-3.91339,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:99:22:22:833:0:0:0,-6.62266,-10 0/0:71.5043:11:11:418:0:0:0,-3.31133,-10 0/0:99:46:46:1731:0:0:0,-10,-10 0/0:59.4631:7:7:265:0:0:0,-2.10721,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:80.5351:14:14:532:0:0:0,-4.21442,-10 0/0:71.5043:11:11:416:0:0:0,-3.31133,-10 0/0:99:31:31:1169:0:0:0,-9.33193,-10 0/0:80.5351:14:14:527:0:0:0,-4.21442,-10 0/0:98.5936:20:20:737:0:0:0,-6.0206,-10 0/0:47.4219:3:3:114:0:0:0,-0.90309,-10 0/0:95.585:19:19:720:0:0:0,-5.71957,-10 0/0:71.5043:11:11:413:0:0:0,-3.31133,-10 0/0:92.5755:18:18:681:0:0:0,-5.41854,-10 0/0:77.5249:13:13:470:0:0:0,-3.91339,-10 0/0:99:41:41:1464:0:0:0,-10,-10 0/0:86.5558:16:16:572:0:0:0,-4.81648,-10 0/0:74.5146:12:12:408:0:0:0,-3.61236,-10 0/0:98.5936:20:20:733:0:0:0,-6.0206,-10 0/0:83.5454:15:15:543:0:0:0,-4.51545,-10 0/0:80.5351:14:14:529:0:0:0,-4.21442,-10 0/0:99:28:28:1050:0:0:0,-8.42884,-10 0/0:56.4528:6:6:202:0:0:0,-1.80618,-10 0/0:86.5558:17:16:605:0:0:0,-4.81648,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:99:27:27:960:0:0:0,-8.12781,-10 0/0:89.5657:18:17:618:0:0:0,-5.11751,-10 0/0:98.5936:20:20:718:0:0:0,-6.0206,-10 0/0:83.5454:15:15:541:0:0:0,-4.51545,-10 0/0:62.4734:8:8:299:0:0:0,-2.40824,-10 0/0:68.494:10:10:380:0:0:0,-3.0103,-10 0/0:53.4425:5:5:187:0:0:0,-1.50515,-10 0/0:59.4631:7:7:262:0:0:0,-2.10721,-10 0/0:99:27:27:1020:0:0:0,-8.12781,-10 0/0:98.5936:20:20:744:0:0:0,-6.0206,-10 0/0:65.4837:9:9:339:0:0:0,-2.70927,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:99:26:26:969:0:0:0,-7.82678,-10 0/0:50.4322:4:4:130:0:0:0,-1.20412,-10 0/0:89.5657:17:17:621:0:0:0,-5.11751,-10 0/0:71.5043:11:11:409:0:0:0,-3.31133,-10 0/0:47.4219:3:3:112:0:0:0,-0.90309,-10 0/0:71.5043:11:11:418:0:0:0,-3.31133,-10 0/0:86.5558:16:16:567:0:0:0,-4.81648,-10 0/0:74.5146:12:12:423:0:0:0,-3.61236,-10 scaffold_46 2973053 . G A 248.34 . AB=0.407407;ABP=5.02092;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1557;DPB=1557;DPRA=1.60588;EPP=12.6832;EPPR=30.5756;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9676;NS=92;NUMALT=1;ODDS=7.43694;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=414;QR=56694;RO=1544;RPP=26.8965;RPPR=2992.67;RUN=1;SAF=2;SAP=12.6832;SAR=9;SRF=727;SRP=14.4021;SRR=817;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.4181:12:12:434:0:0:0,-3.61236,-10 0/0:44.346:5:5:167:0:0:0,-1.50515,-10 0/0:65.4181:12:12:446:0:0:0,-3.61236,-10 0/0:50.3666:7:7:261:0:0:0,-2.10721,-10 0/0:53.3769:8:8:303:0:0:0,-2.40824,-10 0/0:44.346:5:5:189:0:0:0,-1.50515,-10 0/0:99:39:39:1436:0:0:0,-10,-10 0/0:83.4797:18:18:647:0:0:0,-5.41854,-10 0/0:56.3872:9:9:318:0:0:0,-2.70927,-10 0/0:44.346:5:5:190:0:0:0,-1.50515,-10 0/0:47.3563:6:6:228:0:0:0,-1.80618,-10 0/0:32.3048:1:1:38:0:0:0,-0.30103,-3.8 0/0:68.4284:13:13:482:0:0:0,-3.91339,-10 0/0:99:35:35:1284:0:0:0,-10,-10 0/0:98.5303:23:23:842:0:0:0,-6.92369,-10 0/0:86.4901:19:19:691:0:0:0,-5.71957,-10 0/0:80.4696:17:17:643:0:0:0,-5.11751,-10 0/0:50.3666:7:7:263:0:0:0,-2.10721,-10 0/0:98.5303:23:23:859:0:0:0,-6.92369,-10 0/0:99:33:33:1231:0:0:0,-9.93399,-10 0/0:71.4387:14:14:528:0:0:0,-4.21442,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:59.3975:10:10:364:0:0:0,-3.0103,-10 0/0:77.4593:16:16:564:0:0:0,-4.81648,-10 0/0:98.5303:23:23:812:0:0:0,-6.92369,-10 0/0:99:25:25:893:0:0:0,-7.52575,-10 0/0:83.4797:18:18:662:0:0:0,-5.41854,-10 0/0:65.4181:12:12:454:0:0:0,-3.61236,-10 0/0:99:26:26:947:0:0:0,-7.82678,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:35.3151:2:2:76:0:0:0,-0.60206,-7.22 0/0:56.3872:9:9:335:0:0:0,-2.70927,-10 0/0:80.4696:17:17:613:0:0:0,-5.11751,-10 0/0:50.3666:7:7:259:0:0:0,-2.10721,-10 0/0:68.4284:13:13:493:0:0:0,-3.91339,-10 0/0:50.3666:7:7:266:0:0:0,-2.10721,-10 0/0:65.4181:12:12:429:0:0:0,-3.61236,-10 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:71.4387:14:14:523:0:0:0,-4.21442,-10 0/0:92.5096:21:21:761:0:0:0,-6.32163,-10 0/0:99:25:25:941:0:0:0,-7.52575,-10 0/0:65.4181:12:12:419:0:0:0,-3.61236,-10 0/0:80.4696:17:17:627:0:0:0,-5.11751,-10 0/0:99:40:40:1481:0:0:0,-10,-10 0/0:80.4696:17:17:578:0:0:0,-5.11751,-10 0/0:68.4284:13:13:492:0:0:0,-3.91339,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:95.5188:22:22:825:0:0:0,-6.62266,-10 0/0:62.4078:11:11:410:0:0:0,-3.31133,-10 0/0:99:46:46:1727:0:0:0,-10,-10 0/0:50.3666:7:7:265:0:0:0,-2.10721,-10 0/0:99:39:39:1453:0:0:0,-10,-10 0/0:71.4387:14:14:521:0:0:0,-4.21442,-10 0/0:62.4078:11:11:399:0:0:0,-3.31133,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:71.4387:14:14:525:0:0:0,-4.21442,-10 0/0:89.5003:20:20:732:0:0:0,-6.0206,-10 0/0:38.3254:3:3:105:0:0:0,-0.90309,-9.8 0/0:86.4901:19:19:717:0:0:0,-5.71957,-10 0/0:62.4078:11:11:414:0:0:0,-3.31133,-10 0/0:83.4797:18:18:659:0:0:0,-5.41854,-10 0/0:68.4284:13:13:437:0:0:0,-3.91339,-10 0/0:99:41:40:1467:0:0:0,-10,-10 0/0:77.4593:16:16:525:0:0:0,-4.81648,-10 0/0:65.4181:12:12:432:0:0:0,-3.61236,-10 0/0:89.5003:20:20:714:0:0:0,-6.0206,-10 0/0:74.449:15:15:547:0:0:0,-4.51545,-10 0/0:71.4387:14:14:511:0:0:0,-4.21442,-10 0/0:99:28:28:1058:0:0:0,-8.42884,-10 0/0:47.3563:6:6:206:0:0:0,-1.80618,-10 0/0:80.4696:17:17:596:0:0:0,-5.11751,-10 0/0:99:26:26:974:0:0:0,-7.82678,-10 0/1:99:27:16:587:11:414:-10,0,-10 0/0:83.4797:18:18:604:0:0:0,-5.41854,-10 0/0:89.5003:20:20:730:0:0:0,-6.0206,-10 0/0:74.449:15:15:521:0:0:0,-4.51545,-10 0/0:53.3769:8:8:282:0:0:0,-2.40824,-10 0/0:59.3975:10:10:379:0:0:0,-3.0103,-10 0/0:44.346:5:5:187:0:0:0,-1.50515,-10 0/0:50.3666:7:7:265:0:0:0,-2.10721,-10 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:89.5003:20:20:743:0:0:0,-6.0206,-10 0/0:56.3872:9:9:333:0:0:0,-2.70927,-10 0/0:99:32:32:1155:0:0:0,-9.63296,-10 0/0:99:26:26:976:0:0:0,-7.82678,-10 0/0:41.3357:4:4:150:0:0:0,-1.20412,-10 0/0:80.4696:17:17:641:0:0:0,-5.11751,-10 0/0:62.4078:11:11:412:0:0:0,-3.31133,-10 0/0:38.3254:3:3:114:0:0:0,-0.90309,-10 0/0:62.4078:11:11:413:0:0:0,-3.31133,-10 0/0:74.449:16:15:567:0:0:0,-4.51545,-10 0/0:65.4181:12:12:452:0:0:0,-3.61236,-10 scaffold_46 3112662 . A G 628.45 . AB=0.557377;ABP=4.7546;AC=5;AF=0.0271739;AN=184;AO=35;CIGAR=1X;DP=2298;DPB=2298;DPRA=0.597764;EPP=70.5741;EPPR=12.7987;GTI=2;LEN=1;MEANALT=1;MQM=50;MQMR=29.5859;NS=92;NUMALT=1;ODDS=11.9999;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1271;QR=83566;RO=2263;RPP=62.6327;RPPR=4710.8;RUN=1;SAF=1;SAP=70.5741;SAR=34;SRF=1188;SRP=15.2629;SRR=1075;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:86.0426:13:13:457:0:0:0,-3.91339,-10 0/0:95.0732:16:16:597:0:0:0,-4.81648,-10 0/0:99:40:40:1489:0:0:0,-10,-10 0/0:92.5299:31:30:1115:1:38:0,-4.04057,-10 0/0:99:19:19:702:0:0:0,-5.71957,-10 0/0:83.0323:12:12:448:0:0:0,-3.61236,-10 0/0:99:61:61:2280:0:0:0,-10,-10 0/0:99:39:39:1476:0:0:0,-10,-10 0/0:99:18:18:681:0:0:0,-5.41854,-10 0/0:55.9396:3:3:114:0:0:0,-0.90309,-10 0/0:70.9911:8:8:302:0:0:0,-2.40824,-10 0/0:64.9705:6:6:205:0:0:0,-1.80618,-10 0/0:99:48:48:1742:0:0:0,-10,-10 0/0:99:39:39:1457:0:0:0,-10,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:99:47:47:1732:0:0:0,-10,-10 0/0:99:18:18:678:0:0:0,-5.41854,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:99:55:55:2044:0:0:0,-10,-10 0/1:99:16:9:319:7:265:-10,0,-10 0/0:99:45:45:1661:0:0:0,-10,-10 0/0:95.0732:16:16:602:0:0:0,-4.81648,-10 0/0:99:18:18:654:0:0:0,-5.41854,-10 0/0:99:28:28:1021:0:0:0,-8.42884,-10 0/0:99:36:36:1343:0:0:0,-10,-10 0/0:99:24:24:861:0:0:0,-7.22472,-10 0/0:99:20:20:704:0:0:0,-6.0206,-10 0/0:99:34:34:1261:0:0:0,-10,-10 0/0:99:51:51:1874:0:0:0,-10,-10 0/0:70.9911:8:8:290:0:0:0,-2.40824,-10 0/0:64.9705:6:6:212:0:0:0,-1.80618,-10 0/0:99:19:19:707:0:0:0,-5.71957,-10 0/0:77.0117:10:10:369:0:0:0,-3.0103,-10 0/1:2.66874e-05:11:0:0:11:383:-10,-3.31133,0 0/0:83.0323:12:12:449:0:0:0,-3.61236,-10 0/0:89.0528:14:14:473:0:0:0,-4.21442,-10 0/1:99:18:11:411:7:258:-10,0,-10 0/0:92.0631:15:15:548:0:0:0,-4.51545,-10 0/1:62.8332:11:7:262:4:150:-10,0,-10 0/0:99:36:36:1366:0:0:0,-10,-10 0/0:99:21:21:793:0:0:0,-6.32163,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 0/0:99:41:41:1541:0:0:0,-10,-10 0/0:99:27:27:1022:0:0:0,-8.12781,-10 0/0:89.0528:14:14:521:0:0:0,-4.21442,-10 0/0:99:49:49:1818:0:0:0,-10,-10 0/0:99:34:34:1261:0:0:0,-10,-10 0/0:89.0528:14:14:529:0:0:0,-4.21442,-10 0/0:99:62:62:2184:0:0:0,-10,-10 0/0:74.0014:9:9:342:0:0:0,-2.70927,-10 0/0:99:43:43:1616:0:0:0,-10,-10 0/0:74.0014:9:9:342:0:0:0,-2.70927,-10 0/0:80.022:11:11:409:0:0:0,-3.31133,-10 0/0:99:42:42:1569:0:0:0,-10,-10 0/1:4.1699e-07:5:0:0:5:177:-10,-1.50515,0 0/0:99:25:25:898:0:0:0,-7.52575,-10 0/0:92.0631:15:15:562:0:0:0,-4.51545,-10 0/0:86.0426:13:13:470:0:0:0,-3.91339,-10 0/0:92.0631:15:15:567:0:0:0,-4.51545,-10 0/0:99:45:45:1701:0:0:0,-10,-10 0/0:99:19:19:691:0:0:0,-5.71957,-10 0/0:99:52:52:1905:0:0:0,-10,-10 0/0:99:22:22:771:0:0:0,-6.62266,-10 0/0:99:22:22:828:0:0:0,-6.62266,-10 0/0:99:40:40:1459:0:0:0,-10,-10 0/0:99:25:25:891:0:0:0,-7.52575,-10 0/0:95.0732:16:16:602:0:0:0,-4.81648,-10 0/0:99:40:40:1451:0:0:0,-10,-10 0/0:92.0631:15:15:491:0:0:0,-4.51545,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:99:27:27:1014:0:0:0,-8.12781,-10 0/0:99:36:36:1332:0:0:0,-10,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:89.0528:14:14:520:0:0:0,-4.21442,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:95.0732:16:16:603:0:0:0,-4.81648,-10 0/0:61.9602:5:5:189:0:0:0,-1.50515,-10 0/0:92.0631:15:15:555:0:0:0,-4.51545,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:99:30:30:1128:0:0:0,-9.0309,-10 0/0:99:42:42:1529:0:0:0,-10,-10 0/0:99:22:22:826:0:0:0,-6.62266,-10 0/0:99:29:29:1082:0:0:0,-8.72987,-10 0/0:70.9911:8:8:304:0:0:0,-2.40824,-10 0/0:99:26:26:971:0:0:0,-7.82678,-10 0/0:80.022:11:11:415:0:0:0,-3.31133,-10 0/0:67.9808:7:7:265:0:0:0,-2.10721,-10 0/0:99:29:29:1061:0:0:0,-8.72987,-10 0/0:99:25:25:924:0:0:0,-7.52575,-10 0/0:99:22:22:799:0:0:0,-6.62266,-10 scaffold_46 4122444 . C T 681.517 . AB=0.45614;ABP=3.9627;AC=2;AF=0.010989;AN=182;AO=28;CIGAR=1X;DP=1689;DPB=1689;DPRA=1.67841;EPP=3.0103;EPPR=5.20792;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9994;NS=91;NUMALT=1;ODDS=6.00059;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1010;QR=59796;RO=1661;RPP=63.8115;RPPR=3387.53;RUN=1;SAF=14;SAP=3.0103;SAR=14;SRF=810;SRP=5.20792;SRR=851;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.1986:14:14:527:0:0:0,-4.21442,-10 0/0:56.1883:13:13:459:0:0:0,-3.91339,-10 0/0:86.291:23:23:848:0:0:0,-6.92369,-10 0/0:68.2295:17:17:620:0:0:0,-5.11751,-10 0/0:47.1574:10:10:366:0:0:0,-3.0103,-10 0/0:59.1986:14:14:514:0:0:0,-4.21442,-10 0/0:99:45:45:1599:0:0:0,-10,-10 0/0:77.2604:20:20:690:0:0:0,-6.0206,-10 0/0:53.178:12:12:431:0:0:0,-3.61236,-10 0/0:26.0853:3:3:111:0:0:0,-0.90309,-10 0/0:56.1883:13:13:453:0:0:0,-3.91339,-10 0/0:41.1368:8:8:277:0:0:0,-2.40824,-10 0/0:87.7606:33:32:1165:1:16:0,-6.81548,-10 0/0:99:32:32:1141:0:0:0,-9.63296,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:92.3122:25:25:917:0:0:0,-7.52575,-10 0/0:82.0119:31:30:1083:1:16:0,-6.24057,-10 0/0:74.2501:19:19:697:0:0:0,-5.71957,-10 0/0:53.178:12:12:446:0:0:0,-3.61236,-10 0/0:99:28:28:1008:0:0:0,-8.42884,-10 0/0:56.1883:13:13:444:0:0:0,-3.91339,-10 0/0:98.3336:27:27:877:0:0:0,-8.12781,-10 0/0:56.1883:13:13:491:0:0:0,-3.91339,-10 0/0:77.2604:20:20:712:0:0:0,-6.0206,-10 0/0:68.2295:17:17:593:0:0:0,-5.11751,-10 0/0:99:37:37:1296:0:0:0,-10,-10 0/0:68.2295:17:17:630:0:0:0,-5.11751,-10 0/0:50.1677:11:11:409:0:0:0,-3.31133,-10 0/0:62.2089:15:15:567:0:0:0,-4.51545,-10 0/0:99:32:32:1186:0:0:0,-9.63296,-10 0/0:35.1162:6:6:220:0:0:0,-1.80618,-10 0/0:38.1265:7:7:261:0:0:0,-2.10721,-10 0/0:80.2706:21:21:790:0:0:0,-6.32163,-10 0/0:38.1265:7:7:234:0:0:0,-2.10721,-10 0/0:80.2706:21:21:781:0:0:0,-6.32163,-10 0/0:38.1265:7:7:249:0:0:0,-2.10721,-10 0/0:56.1883:13:13:478:0:0:0,-3.91339,-10 0/0:99:28:28:986:0:0:0,-8.42884,-10 0/0:50.1677:11:11:383:0:0:0,-3.31133,-10 0/0:68.2295:17:17:646:0:0:0,-5.11751,-10 0/0:74.2501:19:19:651:0:0:0,-5.71957,-10 0/0:80.2706:21:21:754:0:0:0,-6.32163,-10 0/0:86.291:23:23:833:0:0:0,-6.92369,-10 0/0:83.2808:22:22:776:0:0:0,-6.62266,-10 0/0:68.2295:17:17:619:0:0:0,-5.11751,-10 0/0:50.1677:11:11:383:0:0:0,-3.31133,-10 0/0:99:43:43:1592:0:0:0,-10,-10 0/0:86.291:23:23:813:0:0:0,-6.92369,-10 0/0:44.1471:9:9:305:0:0:0,-2.70927,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:50.1677:11:11:416:0:0:0,-3.31133,-10 0/0:89.3009:24:24:895:0:0:0,-7.22472,-10 0/0:47.1574:10:10:329:0:0:0,-3.0103,-10 0/0:44.1471:9:9:304:0:0:0,-2.70927,-10 0/0:99:45:45:1611:0:0:0,-10,-10 0/0:59.1986:14:14:516:0:0:0,-4.21442,-10 0/0:74.2501:19:19:675:0:0:0,-5.71957,-10 0/0:56.1883:13:13:479:0:0:0,-3.91339,-10 0/0:53.178:12:12:409:0:0:0,-3.61236,-10 0/0:44.1471:9:9:326:0:0:0,-2.70927,-10 0/0:99:33:33:1179:0:0:0,-9.93399,-10 0/0:59.1986:14:14:524:0:0:0,-4.21442,-10 0/0:99:29:29:1035:0:0:0,-8.72987,-10 0/0:62.2089:15:15:516:0:0:0,-4.51545,-10 0/0:71.2398:18:18:620:0:0:0,-5.41854,-10 0/0:99:28:28:1034:0:0:0,-8.42884,-10 0/0:68.2295:17:17:633:0:0:0,-5.11751,-10 0/0:44.1471:9:9:310:0:0:0,-2.70927,-10 0/0:95.3194:26:26:915:0:0:0,-7.82678,-10 0/0:32.1059:5:5:190:0:0:0,-1.50515,-10 0/0:86.291:23:23:809:0:0:0,-6.92369,-10 0/1:99:28:19:668:9:341:-10,0,-10 0/0:74.2501:19:19:681:0:0:0,-5.71957,-10 0/0:71.2398:18:18:671:0:0:0,-5.41854,-10 0/1:99:29:12:425:17:637:-10,0,-10 0/0:50.1677:11:11:404:0:0:0,-3.31133,-10 0/0:50.1677:11:11:405:0:0:0,-3.31133,-10 0/0:59.1986:14:14:523:0:0:0,-4.21442,-10 .:.:.:.:.:.:.:. 0/0:53.178:12:12:425:0:0:0,-3.61236,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:95.3194:26:26:944:0:0:0,-7.82678,-10 0/0:65.2192:16:16:599:0:0:0,-4.81648,-10 0/0:62.2089:15:15:552:0:0:0,-4.51545,-10 0/0:62.2089:15:15:546:0:0:0,-4.51545,-10 0/0:35.1162:6:6:228:0:0:0,-1.80618,-10 0/0:80.2706:21:21:762:0:0:0,-6.32163,-10 0/0:83.2808:22:22:780:0:0:0,-6.62266,-10 0/0:29.0956:4:4:152:0:0:0,-1.20412,-10 0/0:53.178:12:12:423:0:0:0,-3.61236,-10 0/0:74.2501:19:19:630:0:0:0,-5.71957,-10 0/0:59.1986:14:14:490:0:0:0,-4.21442,-10 scaffold_46 4169117 . T C 5004.23 . AB=0.58;ABP=14.1282;AC=19;AF=0.103261;AN=184;AO=190;CIGAR=1X;DP=1549;DPB=1549;DPRA=1.32576;EPP=3.19316;EPPR=7.50526;GTI=3;LEN=1;MEANALT=1.0625;MQM=60;MQMR=59.9764;NS=92;NUMALT=1;ODDS=0.561667;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6864;QR=49759;RO=1357;RPP=415.59;RPPR=2949.7;RUN=1;SAF=97;SAP=3.19316;SAR=93;SRF=705;SRP=7.50526;SRR=652;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.9346:15:15:537:0:0:0,-4.51545,-10 0/0:23.8419:6:6:205:0:0:0,-1.80618,-10 0/0:62.9758:19:19:697:0:0:0,-5.71957,-10 0/0:38.8934:11:11:417:0:0:0,-3.31133,-10 0/1:99:9:4:145:5:174:-10,0,-10 0/0:29.8625:9:8:303:0:0:0,-2.40824,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:72.0067:22:22:819:0:0:0,-6.62266,-10 0/0:23.8419:6:6:228:0:0:0,-1.80618,-10 0/0:14.811:3:3:114:0:0:0,-0.90309,-10 0/0:20.8316:5:5:189:0:0:0,-1.50515,-10 0/0:35.8831:10:10:352:0:0:0,-3.0103,-10 0/1:99:33:14:464:19:668:-10,0,-10 0/0:99:31:31:1157:0:0:0,-9.33193,-10 0/0:65.9861:20:20:730:0:0:0,-6.0206,-10 0/0:68.9964:21:21:791:0:0:0,-6.32163,-10 0/0:65.9861:20:20:734:0:0:0,-6.0206,-10 1/1:8.53762:9:0:0:9:313:-10,-2.70927,0 1/1:26.5994:15:0:0:15:569:-10,-4.51545,0 0/0:99:32:32:1151:0:0:0,-9.63296,-10 0/0:65.9861:20:20:757:0:0:0,-6.0206,-10 0/0:87.0581:27:27:1019:0:0:0,-8.12781,-10 0/0:29.8625:8:8:278:0:0:0,-2.40824,-10 0/1:99:16:10:366:6:204:-10,0,-10 1/1:47.6715:23:0:0:22:831:-10,-6.62266,0 0/0:72.0067:22:22:792:0:0:0,-6.62266,-10 1/1:32.62:17:0:0:17:604:-10,-5.11751,0 0/1:0.269347:7:0:0:7:226:-10,-2.10721,0 0/0:56.9552:17:17:637:0:0:0,-5.11751,-10 0/1:99:34:14:476:20:726:-10,0,-10 0/0:29.8625:8:8:297:0:0:0,-2.40824,-10 0/1:0.0657868:5:0:0:5:168:-10,-1.50515,0 0/0:59.9655:18:18:664:0:0:0,-5.41854,-10 0/0:32.8728:9:9:337:0:0:0,-2.70927,-10 0/0:75.017:23:23:869:0:0:0,-6.92369,-10 0/0:17.8213:4:4:151:0:0:0,-1.20412,-10 0/0:32.8728:9:9:331:0:0:0,-2.70927,-10 0/0:81.0376:25:25:928:0:0:0,-7.52575,-10 0/0:20.8316:5:5:182:0:0:0,-1.50515,-10 0/0:47.9243:14:14:498:0:0:0,-4.21442,-10 0/1:99:26:11:417:15:557:-10,0,-10 0/0:0.920076:16:15:539:1:38:-0.18764,0,-10 0/0:56.9552:17:17:621:0:0:0,-5.11751,-10 0/0:78.0273:24:24:892:0:0:0,-7.22472,-10 0/0:38.8934:11:11:326:0:0:0,-3.31133,-10 0/0:38.8934:11:11:386:0:0:0,-3.31133,-10 0/0:99:49:48:1719:1:38:0,-9.26027,-10 0/0:56.9552:17:17:631:0:0:0,-5.11751,-10 0/0:47.9243:14:14:521:0:0:0,-4.21442,-10 0/1:99:40:16:589:24:872:-10,0,-10 0/0:32.8728:9:9:342:0:0:0,-2.70927,-10 0/1:99:30:15:539:15:559:-10,0,-10 1/1:8.53762:9:0:0:9:317:-10,-2.70927,0 0/0:32.8728:9:9:341:0:0:0,-2.70927,-10 0/0:99:46:46:1712:0:0:0,-10,-10 0/0:50.9346:15:15:567:0:0:0,-4.51545,-10 0/0:59.9655:18:18:647:0:0:0,-5.41854,-10 0/0:23.8419:6:6:228:0:0:0,-1.80618,-10 0/0:50.9346:15:15:512:0:0:0,-4.51545,-10 0/0:23.8419:6:6:217:0:0:0,-1.80618,-10 0/0:84.0479:26:26:954:0:0:0,-7.82678,-10 0/0:78.0273:24:24:873:0:0:0,-7.22472,-10 0/0:78.0273:24:24:884:0:0:0,-7.22472,-10 0/0:59.9655:18:18:683:0:0:0,-5.41854,-10 0/0:41.9037:12:12:440:0:0:0,-3.61236,-10 0/0:68.9964:21:21:798:0:0:0,-6.32163,-10 0/0:38.8934:11:11:411:0:0:0,-3.31133,-10 0/0:56.9552:17:17:636:0:0:0,-5.11751,-10 0/0:81.0376:25:25:924:0:0:0,-7.52575,-10 0/0:20.8316:5:5:166:0:0:0,-1.50515,-10 0/0:59.9655:18:18:679:0:0:0,-5.41854,-10 0/0:87.0581:27:27:974:0:0:0,-8.12781,-10 0/0:68.9964:21:21:794:0:0:0,-6.32163,-10 0/0:56.9552:17:17:613:0:0:0,-5.11751,-10 0/0:62.9758:19:19:702:0:0:0,-5.71957,-10 0/0:68.9964:21:21:770:0:0:0,-6.32163,-10 0/0:44.914:13:13:487:0:0:0,-3.91339,-10 0/0:38.8934:11:11:412:0:0:0,-3.31133,-10 0/0:29.8625:8:8:268:0:0:0,-2.40824,-10 0/0:38.8934:11:11:415:0:0:0,-3.31133,-10 0/0:93.0784:29:29:993:0:0:0,-8.72987,-10 0/0:84.0479:26:26:952:0:0:0,-7.82678,-10 0/0:50.9346:15:15:569:0:0:0,-4.51545,-10 0/0:84.0479:26:26:981:0:0:0,-7.82678,-10 0/0:38.8934:11:11:414:0:0:0,-3.31133,-10 0/0:32.8728:9:9:338:0:0:0,-2.70927,-10 0/0:35.8831:10:10:378:0:0:0,-3.0103,-10 0/0:41.9037:12:12:433:0:0:0,-3.61236,-10 0/0:17.8213:4:4:152:0:0:0,-1.20412,-10 0/0:35.8831:10:10:372:0:0:0,-3.0103,-10 0/0:41.9037:12:12:424:0:0:0,-3.61236,-10 0/0:35.8831:10:10:348:0:0:0,-3.0103,-10 scaffold_46 4178412 . G C 3515.57 . AB=0.681319;ABP=28.9964;AC=16;AF=0.0879121;AN=182;AO=134;CIGAR=1X;DP=1493;DPB=1493;DPRA=0.80683;EPP=7.15878;EPPR=5.70024;GTI=4;LEN=1;MEANALT=1;MQM=59.8582;MQMR=59.9587;NS=91;NUMALT=1;ODDS=1.59707;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4896;QR=49663;RO=1357;RPP=285.367;RPPR=2829.35;RUN=1;SAF=74;SAP=6.18648;SAR=60;SRF=685;SRP=3.28073;SRR=672;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:37.4372:9:9:341:0:0:0,-2.70927,-10 0/0:25.396:5:5:159:0:0:0,-1.50515,-10 0/0:64.5299:18:18:676:0:0:0,-5.41854,-10 0/0:40.4475:10:10:369:0:0:0,-3.0103,-10 0/0:49.4784:13:13:487:0:0:0,-3.91339,-10 0/0:34.4269:8:8:246:0:0:0,-2.40824,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:85.602:25:25:917:0:0:0,-7.52575,-10 0/1:0.158347:8:0:0:8:304:-10,-2.40824,0 0/0:16.3651:2:2:76:0:0:0,-0.60206,-7.22 0/0:37.4372:9:9:340:0:0:0,-2.70927,-10 0/0:40.4475:10:10:355:0:0:0,-3.0103,-10 0/0:82.5915:24:24:883:0:0:0,-7.22472,-10 0/0:99:35:35:1283:0:0:0,-10,-10 0/0:82.5915:24:24:882:0:0:0,-7.22472,-10 0/0:76.5711:22:22:823:0:0:0,-6.62266,-10 0/0:76.5711:22:22:831:0:0:0,-6.62266,-10 0/0:40.4475:10:10:368:0:0:0,-3.0103,-10 0/0:40.4475:10:10:372:0:0:0,-3.0103,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/1:99:15:7:243:8:298:-10,0,-10 0/0:88.6123:26:26:929:0:0:0,-7.82678,-10 0/0:46.4681:12:12:430:0:0:0,-3.61236,-10 0/0:55.499:15:15:512:0:0:0,-4.51545,-10 0/0:76.5711:22:22:829:0:0:0,-6.62266,-10 0/0:58.5093:16:16:589:0:0:0,-4.81648,-10 0/0:46.4681:12:12:443:0:0:0,-3.61236,-10 0/0:46.4681:12:12:441:0:0:0,-3.61236,-10 0/0:58.5093:17:16:605:0:0:0,-4.81648,-10 0/0:99:45:45:1677:0:0:0,-10,-10 .:.:.:.:.:.:.:. 0/0:22.3857:4:4:143:0:0:0,-1.20412,-10 0/0:46.4681:12:12:400:0:0:0,-3.61236,-10 0/1:0.0194805:5:0:0:5:187:-10,-1.50515,0 1/1:33.4402:21:0:0:21:775:-10,-6.32163,0 0/0:28.4063:6:6:225:0:0:0,-1.80618,-10 0/0:49.4784:13:13:489:0:0:0,-3.91339,-10 0/1:99:18:9:320:9:342:-10,0,-10 1/1:24.4093:18:0:0:18:658:-10,-5.41854,0 0/1:99:10:3:114:7:248:-10,0,-9.70888 0/0:73.5608:21:21:763:0:0:0,-6.32163,-10 0/1:0.671289:10:0:0:10:353:-10,-3.0103,0 1/1:15.3784:15:0:0:15:510:-10,-4.51545,0 0/1:99:19:10:352:9:339:-10,0,-10 0/0:67.5402:19:19:713:0:0:0,-5.71957,-10 0/0:58.5093:16:16:527:0:0:0,-4.81648,-10 0/0:99:41:41:1529:0:0:0,-10,-10 0/0:73.5608:21:21:760:0:0:0,-6.32163,-10 0/0:34.4269:8:8:304:0:0:0,-2.40824,-10 0/0:99:35:35:1285:0:0:0,-10,-10 0/0:52.4887:14:14:510:0:0:0,-4.21442,-10 0/0:99:30:30:1058:0:0:0,-9.0309,-10 0/0:37.4372:9:9:339:0:0:0,-2.70927,-10 0/0:40.4475:10:10:350:0:0:0,-3.0103,-10 0/0:94.6328:28:28:1022:0:0:0,-8.42884,-10 0/0:34.4269:8:8:304:0:0:0,-2.40824,-10 0/0:46.4681:12:12:452:0:0:0,-3.61236,-10 0/1:0.0390489:6:0:0:6:220:-10,-1.80618,0 1/1:24.4093:18:0:0:18:662:-10,-5.41854,0 0/0:37.4372:9:9:342:0:0:0,-2.70927,-10 0/0:79.5813:23:23:834:0:0:0,-6.92369,-10 0/0:52.4887:14:14:502:0:0:0,-4.21442,-10 0/0:97.6429:30:29:1048:0:0:0,-8.72987,-10 0/0:49.4784:13:13:491:0:0:0,-3.91339,-10 0/0:28.4063:6:6:228:0:0:0,-1.80618,-10 0/0:49.4784:13:13:479:0:0:0,-3.91339,-10 0/0:67.5402:19:19:672:0:0:0,-5.71957,-10 0/0:43.4578:11:11:417:0:0:0,-3.31133,-10 0/0:82.5915:24:24:853:0:0:0,-7.22472,-10 0/0:49.4784:13:13:491:0:0:0,-3.91339,-10 0/0:52.4887:14:14:529:0:0:0,-4.21442,-10 0/0:79.5813:23:23:843:0:0:0,-6.92369,-10 0/0:76.5711:22:22:812:0:0:0,-6.62266,-10 0/0:64.5299:18:18:652:0:0:0,-5.41854,-10 0/0:76.5711:22:22:830:0:0:0,-6.62266,-10 0/0:49.4784:13:13:457:0:0:0,-3.91339,-10 0/0:43.4578:11:11:413:0:0:0,-3.31133,-10 0/0:49.4784:13:13:490:0:0:0,-3.91339,-10 0/0:16.3651:2:2:76:0:0:0,-0.60206,-7.22 0/0:43.4578:11:11:380:0:0:0,-3.31133,-10 0/0:97.6429:29:29:1086:0:0:0,-8.72987,-10 0/0:94.6328:28:28:972:0:0:0,-8.42884,-10 0/0:34.4269:8:8:299:0:0:0,-2.40824,-10 0/0:55.499:15:15:539:0:0:0,-4.51545,-10 0/0:79.5813:23:23:860:0:0:0,-6.92369,-10 0/0:28.4063:6:6:223:0:0:0,-1.80618,-10 0/0:64.5299:18:18:663:0:0:0,-5.41854,-10 0/0:31.4166:7:7:266:0:0:0,-2.10721,-10 0/0:31.4166:7:7:266:0:0:0,-2.10721,-10 0/0:82.5915:24:24:889:0:0:0,-7.22472,-10 0/0:70.5505:20:20:718:0:0:0,-6.0206,-10 0/0:61.5196:17:17:637:0:0:0,-5.11751,-10 scaffold_46 4212869 . A G 1770.11 . AB=0.488889;ABP=3.15506;AC=5;AF=0.0277778;AN=180;AO=70;CIGAR=1X;DP=1823;DPB=1823;DPRA=1.28652;EPP=9.09042;EPPR=9.62652;GTI=2;LEN=1;MEANALT=1;MQM=59.0286;MQMR=59.9748;NS=90;NUMALT=1;ODDS=1.70432;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2558;QR=64609;RO=1749;RPP=155.013;RPPR=3748.98;RUN=1;SAF=42;SAP=9.09042;SAR=28;SRF=836;SRP=10.3715;SRR=913;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.521:18:18:629:0:0:0,-5.41854,-10 0/0:59.5004:16:16:592:0:0:0,-4.81648,-10 0/0:83.5827:25:24:897:0:0:0,-7.22472,-10 0/0:50.4695:13:13:480:0:0:0,-3.91339,-10 0/0:56.4901:15:15:566:0:0:0,-4.51545,-10 0/0:38.4283:9:9:337:0:0:0,-2.70927,-10 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:83.5827:24:24:904:0:0:0,-7.22472,-10 0/0:32.9095:22:21:793:1:36:0,-1.68024,-10 .:.:.:.:.:.:.:. 0/0:17.3562:2:2:75:0:0:0,-0.60206,-7.125 0/0:32.4077:7:7:261:0:0:0,-2.10721,-10 0/0:99:32:32:1111:0:0:0,-9.63296,-10 0/0:99:33:33:1232:0:0:0,-9.93399,-10 0/0:92.6128:27:27:982:0:0:0,-8.12781,-10 0/0:98.6308:29:29:1096:0:0:0,-8.72987,-10 0/0:95.6223:28:28:1057:0:0:0,-8.42884,-10 0/0:41.4386:10:10:376:0:0:0,-3.0103,-10 0/0:80.5724:23:23:828:0:0:0,-6.92369,-10 0/1:99:33:17:643:16:597:-10,0,-10 0/0:62.5107:17:17:643:0:0:0,-5.11751,-10 0/1:99:28:16:603:12:454:-10,0,-10 0/1:0.433134:13:0:0:13:488:-10,-3.91339,0 0/0:92.6128:27:27:995:0:0:0,-8.12781,-10 0/0:59.5004:16:16:595:0:0:0,-4.81648,-10 0/0:84.2617:33:32:1175:1:16:0,-6.81548,-10 0/0:77.5622:22:22:798:0:0:0,-6.62266,-10 0/0:32.4077:7:7:262:0:0:0,-2.10721,-10 0/0:74.5519:21:21:791:0:0:0,-6.32163,-10 0/0:95.6223:28:28:1035:0:0:0,-8.42884,-10 0/0:23.3768:4:4:148:0:0:0,-1.20412,-10 0/0:23.3768:4:4:152:0:0:0,-1.20412,-10 0/0:74.5519:21:21:760:0:0:0,-6.32163,-10 0/0:32.4077:7:7:262:0:0:0,-2.10721,-10 0/0:83.5827:24:24:866:0:0:0,-7.22472,-10 0/0:29.3974:6:6:228:0:0:0,-1.80618,-10 0/0:56.4901:15:15:566:0:0:0,-4.51545,-10 0/1:99:37:22:810:15:537:-10,0,-10 0/0:74.5519:21:21:795:0:0:0,-6.32163,-10 0/0:32.4077:7:7:266:0:0:0,-2.10721,-10 0/1:99:24:14:528:10:377:-10,0,-10 0/0:65.521:18:18:679:0:0:0,-5.41854,-10 0/0:71.5416:20:20:703:0:0:0,-6.0206,-10 0/0:95.6223:28:28:1002:0:0:0,-8.42884,-10 0/0:92.6128:27:27:945:0:0:0,-8.12781,-10 0/0:65.521:18:18:673:0:0:0,-5.41854,-10 0/0:99:34:34:1234:0:0:0,-10,-10 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:53.4798:15:14:529:0:0:0,-4.21442,-10 0/0:83.5827:24:24:899:0:0:0,-7.22472,-10 0/0:53.4798:14:14:528:0:0:0,-4.21442,-10 0/0:99:42:42:1525:0:0:0,-10,-10 0/0:62.5107:17:17:643:0:0:0,-5.11751,-10 0/0:29.3974:6:6:219:0:0:0,-1.80618,-10 0/0:99:43:43:1615:0:0:0,-10,-10 0/0:47.4592:12:12:447:0:0:0,-3.61236,-10 0/0:92.6128:27:27:1010:0:0:0,-8.12781,-10 0/0:32.4077:7:7:262:0:0:0,-2.10721,-10 0/0:41.4386:10:10:380:0:0:0,-3.0103,-10 0/0:56.4901:15:15:551:0:0:0,-4.51545,-10 0/0:92.6128:27:27:983:0:0:0,-8.12781,-10 0/0:83.5827:25:24:879:0:0:0,-7.22472,-10 0/0:99:35:35:1238:0:0:0,-10,-10 0/0:47.4592:12:12:434:0:0:0,-3.61236,-10 0/0:38.4283:9:9:339:0:0:0,-2.70927,-10 0/0:99:38:38:1409:0:0:0,-10,-10 0/0:86.5929:25:25:895:0:0:0,-7.52575,-10 0/0:50.4695:13:13:494:0:0:0,-3.91339,-10 0/0:99:44:44:1666:0:0:0,-10,-10 0/0:62.5107:17:17:610:0:0:0,-5.11751,-10 0/0:83.5827:24:24:907:0:0:0,-7.22472,-10 0/0:74.5519:21:21:755:0:0:0,-6.32163,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:68.5313:19:19:702:0:0:0,-5.71957,-10 0/0:68.5313:19:19:708:0:0:0,-5.71957,-10 0/0:26.3871:5:5:190:0:0:0,-1.50515,-10 0/0:68.5313:19:19:691:0:0:0,-5.71957,-10 0/0:0.615451:14:13:481:1:38:-0.731708,0,-10 0/0:32.4077:7:7:266:0:0:0,-2.10721,-10 0/0:32.4077:7:7:264:0:0:0,-2.10721,-10 0/0:68.5313:19:19:683:0:0:0,-5.71957,-10 0/0:99:40:40:1467:0:0:0,-10,-10 0/0:71.5416:20:20:740:0:0:0,-6.0206,-10 0/0:99:34:33:1230:0:0:0,-9.93399,-10 0/0:59.5522:24:23:869:1:15:0,-4.34451,-10 0/0:20.3665:3:3:114:0:0:0,-0.90309,-10 0/0:59.5004:16:16:599:0:0:0,-4.81648,-10 0/0:62.5107:17:17:636:0:0:0,-5.11751,-10 .:.:.:.:.:.:.:. 0/0:62.5107:17:17:622:0:0:0,-5.11751,-10 0/0:38.4283:9:9:342:0:0:0,-2.70927,-10 0/0:74.5519:21:21:791:0:0:0,-6.32163,-10 scaffold_46 4287188 . C T 78.3668 . AB=0.3;ABP=9.95901;AC=2;AF=0.010989;AN=182;AO=8;CIGAR=1X;DP=1062;DPB=1062;DPRA=1.00714;EPP=4.09604;EPPR=6.64453;GTI=1;LEN=1;MEANALT=1;MQM=57.25;MQMR=59.7808;NS=91;NUMALT=1;ODDS=3.7178;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=282;QR=38189;RO=1054;RPP=20.3821;RPPR=2291.74;RUN=1;SAF=3;SAP=4.09604;SAR=5;SRF=506;SRP=6.64453;SRR=548;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.7942:12:12:417:0:0:0,-3.61236,-10 0/0:64.7633:9:9:335:0:0:0,-2.70927,-10 0/0:79.8148:14:14:515:0:0:0,-4.21442,-10 0/0:58.7427:7:7:256:0:0:0,-2.10721,-10 0/0:52.7221:5:5:187:0:0:0,-1.50515,-10 0/0:52.7221:5:5:168:0:0:0,-1.50515,-10 0/0:88.8453:17:17:640:0:0:0,-5.11751,-10 0/0:79.8148:14:14:503:0:0:0,-4.21442,-10 0/0:46.7015:3:3:109:0:0:0,-0.90309,-10 0/0:40.6809:1:1:38:0:0:0,-0.30103,-3.8 0/0:55.7324:6:6:205:0:0:0,-1.80618,-10 0/0:49.7118:4:4:128:0:0:0,-1.20412,-10 0/0:99:24:24:902:0:0:0,-7.22472,-10 0/0:99:21:21:792:0:0:0,-6.32163,-10 0/0:85.8352:16:16:603:0:0:0,-4.81648,-10 0/0:82.825:15:15:523:0:0:0,-4.51545,-10 0/0:76.8045:13:13:474:0:0:0,-3.91339,-10 0/0:55.7324:6:6:219:0:0:0,-1.80618,-10 0/0:79.8148:14:14:521:0:0:0,-4.21442,-10 0/0:99:25:25:943:0:0:0,-7.52575,-10 0/0:82.825:15:15:557:0:0:0,-4.51545,-10 0/0:99:21:21:788:0:0:0,-6.32163,-10 0/0:43.6912:2:2:74:0:0:0,-0.60206,-7.03 0/0:79.8148:14:14:501:0:0:0,-4.21442,-10 0/0:73.7942:12:12:388:0:0:0,-3.61236,-10 0/0:79.8148:14:14:527:0:0:0,-4.21442,-10 0/0:64.7633:9:9:332:0:0:0,-2.70927,-10 0/0:85.8352:16:16:589:0:0:0,-4.81648,-10 0/0:58.7427:7:7:234:0:0:0,-2.10721,-10 0/0:94.8661:19:19:669:0:0:0,-5.71957,-10 0/0:49.7118:4:4:151:0:0:0,-1.20412,-10 0/0:43.6912:2:2:74:0:0:0,-0.60206,-7.03 0/0:79.8148:14:14:460:0:0:0,-4.21442,-10 0/0:49.7118:4:4:147:0:0:0,-1.20412,-10 0/0:76.8045:13:13:468:0:0:0,-3.91339,-10 0/0:43.6912:2:2:67:0:0:0,-0.60206,-6.365 0/0:61.753:8:8:271:0:0:0,-2.40824,-10 0/0:85.8352:16:16:582:0:0:0,-4.81648,-10 0/0:58.7427:7:7:266:0:0:0,-2.10721,-10 0/0:88.8453:17:17:590:0:0:0,-5.11751,-10 0/0:88.8453:17:17:638:0:0:0,-5.11751,-10 0/0:64.7633:9:9:330:0:0:0,-2.70927,-10 0/0:70.7839:11:11:415:0:0:0,-3.31133,-10 0/0:99:23:23:842:0:0:0,-6.92369,-10 0/0:88.8453:17:17:632:0:0:0,-5.11751,-10 0/0:76.8045:13:13:423:0:0:0,-3.91339,-10 0/0:97.8731:20:20:729:0:0:0,-6.0206,-10 0/0:70.7839:11:11:387:0:0:0,-3.31133,-10 0/0:70.7839:11:11:379:0:0:0,-3.31133,-10 0/0:99:30:30:1057:0:0:0,-9.0309,-10 0/0:55.7324:6:6:206:0:0:0,-1.80618,-10 0/0:88.8453:17:17:610:0:0:0,-5.11751,-10 0/0:70.7839:11:11:409:0:0:0,-3.31133,-10 0/0:58.7427:7:7:264:0:0:0,-2.10721,-10 0/0:97.8731:20:20:730:0:0:0,-6.0206,-10 0/0:61.753:8:8:280:0:0:0,-2.40824,-10 0/0:88.8453:17:17:614:0:0:0,-5.11751,-10 0/0:43.6912:2:2:75:0:0:0,-0.60206,-7.125 0/0:73.7942:12:12:453:0:0:0,-3.61236,-10 0/0:49.7118:4:4:142:0:0:0,-1.20412,-10 0/0:97.8731:20:20:741:0:0:0,-6.0206,-10 0/0:82.825:15:15:570:0:0:0,-4.51545,-10 0/0:82.825:15:15:541:0:0:0,-4.51545,-10 0/0:73.7942:12:12:426:0:0:0,-3.61236,-10 0/0:70.7839:11:11:408:0:0:0,-3.31133,-10 0/1:78.2307:10:6:221:4:152:-10,0,-10 0/0:73.7942:12:12:434:0:0:0,-3.61236,-10 0/0:55.7324:6:6:224:0:0:0,-1.80618,-10 0/0:88.8453:17:17:616:0:0:0,-5.11751,-10 0/0:64.7633:9:9:302:0:0:0,-2.70927,-10 0/0:47.3598:13:12:431:1:16:0,-1.19945,-10 0/0:91.8551:18:18:650:0:0:0,-5.41854,-10 0/0:76.8045:13:13:478:0:0:0,-3.91339,-10 0/0:49.7118:4:4:147:0:0:0,-1.20412,-10 0/0:76.8045:13:13:444:0:0:0,-3.91339,-10 0/0:0.00245124:14:13:488:1:38:-0.731708,0,-10 0/0:64.7633:9:9:320:0:0:0,-2.70927,-10 0/0:64.7633:9:9:319:0:0:0,-2.70927,-10 0/0:40.6809:1:1:38:0:0:0,-0.30103,-3.8 0/0:40.6809:1:1:38:0:0:0,-0.30103,-3.8 0/0:99:24:24:866:0:0:0,-7.22472,-10 0/0:94.8661:19:19:695:0:0:0,-5.71957,-10 0/1:16.2554:10:8:273:2:76:-5.86291,0,-10 0/0:82.825:15:15:560:0:0:0,-4.51545,-10 0/0:73.7942:12:12:396:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0/0:67.7736:10:10:371:0:0:0,-3.0103,-10 0/0:55.7324:6:6:228:0:0:0,-1.80618,-10 0/0:43.6912:2:2:54:0:0:0,-0.60206,-5.13 0/0:64.7633:9:9:334:0:0:0,-2.70927,-10 0/0:67.7736:10:10:379:0:0:0,-3.0103,-10 0/0:67.7736:10:10:369:0:0:0,-3.0103,-10 scaffold_46 4560538 . A G 472.61 . AB=0.633333;ABP=7.64277;AC=1;AF=0.00549451;AN=182;AO=19;CIGAR=1X;DP=2182;DPB=2182;DPRA=1.25465;EPP=4.03889;EPPR=3.02637;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9574;NS=91;NUMALT=1;ODDS=5.39841;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=685;QR=79544;RO=2162;RPP=44.2683;RPPR=4663.05;RUN=1;SAF=11;SAP=4.03889;SAR=8;SRF=1087;SRP=3.15493;SRR=1075;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:89.701:23:23:853:0:0:0,-6.92369,-10 0/0:47.5568:9:9:312:0:0:0,-2.70927,-10 0/0:92.7113:24:24:870:0:0:0,-7.22472,-10 0/0:47.5568:9:9:309:0:0:0,-2.70927,-10 0/0:38.5259:6:6:228:0:0:0,-1.80618,-10 0/0:56.5877:12:12:455:0:0:0,-3.61236,-10 0/0:99:38:38:1393:0:0:0,-10,-10 0/0:68.6289:16:16:603:0:0:0,-4.81648,-10 0/0:71.6392:17:17:636:0:0:0,-5.11751,-10 0/0:38.5259:6:6:228:0:0:0,-1.80618,-10 0/0:23.4744:1:1:37:0:0:0,-0.30103,-3.7 0/0:50.5671:10:10:378:0:0:0,-3.0103,-10 0/0:99:32:32:1187:0:0:0,-9.63296,-10 0/0:99:45:45:1618:0:0:0,-10,-10 0/0:99:37:37:1362:0:0:0,-10,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:89.701:23:23:838:0:0:0,-6.92369,-10 0/0:99:34:34:1268:0:0:0,-10,-10 0/0:99:42:42:1510:0:0:0,-10,-10 0/0:99:27:27:976:0:0:0,-8.12781,-10 0/0:99:46:46:1704:0:0:0,-10,-10 0/0:59.598:13:13:487:0:0:0,-3.91339,-10 0/0:71.6392:17:17:642:0:0:0,-5.11751,-10 0/0:92.7113:24:24:885:0:0:0,-7.22472,-10 0/0:99:52:52:1956:0:0:0,-10,-10 0/0:71.6392:17:17:632:0:0:0,-5.11751,-10 0/0:80.67:20:20:749:0:0:0,-6.0206,-10 0/0:98.7318:26:26:929:0:0:0,-7.82678,-10 0/0:99:47:47:1717:0:0:0,-10,-10 0/0:29.495:3:3:114:0:0:0,-0.90309,-10 0/0:44.5465:8:8:295:0:0:0,-2.40824,-10 0/0:99:28:28:1033:0:0:0,-8.42884,-10 0/0:74.6495:18:18:668:0:0:0,-5.41854,-10 0/0:80.67:20:20:738:0:0:0,-6.0206,-10 0/0:56.5877:12:12:447:0:0:0,-3.61236,-10 0/0:77.6597:19:19:668:0:0:0,-5.71957,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:89.701:23:23:856:0:0:0,-6.92369,-10 0/0:83.6802:21:21:792:0:0:0,-6.32163,-10 0/0:99:40:40:1475:0:0:0,-10,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:80.67:20:20:731:0:0:0,-6.0206,-10 0/0:99:37:37:1376:0:0:0,-10,-10 0/0:99:37:37:1358:0:0:0,-10,-10 0/0:68.6289:16:16:593:0:0:0,-4.81648,-10 0/0:99:50:50:1844:0:0:0,-10,-10 0/0:98.7318:26:26:937:0:0:0,-7.82678,-10 0/0:68.6289:16:16:600:0:0:0,-4.81648,-10 0/0:99:43:43:1541:0:0:0,-10,-10 0/0:62.6083:14:14:505:0:0:0,-4.21442,-10 0/0:99:49:49:1835:0:0:0,-10,-10 0/0:65.6186:15:15:563:0:0:0,-4.51545,-10 0/0:44.5465:8:8:304:0:0:0,-2.40824,-10 0/0:99:62:62:2237:0:0:0,-10,-10 0/0:62.6083:14:14:531:0:0:0,-4.21442,-10 0/0:83.6802:21:21:791:0:0:0,-6.32163,-10 0/0:50.5671:10:10:351:0:0:0,-3.0103,-10 0/0:59.598:13:13:471:0:0:0,-3.91339,-10 0/0:74.6495:18:18:663:0:0:0,-5.41854,-10 0/0:99:46:45:1636:0:0:0,-10,-10 0/0:74.6495:18:18:653:0:0:0,-5.41854,-10 0/0:99:49:49:1793:0:0:0,-10,-10 0/0:74.6495:18:18:650:0:0:0,-5.41854,-10 0/0:71.6392:17:17:609:0:0:0,-5.11751,-10 0/0:99:40:40:1483:0:0:0,-10,-10 0/1:99:30:11:417:19:685:-10,0,-10 0/0:62.6083:14:14:531:0:0:0,-4.21442,-10 0/0:99:35:35:1303:0:0:0,-10,-10 0/0:74.6495:18:18:677:0:0:0,-5.41854,-10 0/0:89.701:23:23:820:0:0:0,-6.92369,-10 0/0:99:42:42:1552:0:0:0,-10,-10 0/0:77.6597:19:19:702:0:0:0,-5.71957,-10 .:.:.:.:.:.:.:. 0/0:74.6495:18:18:684:0:0:0,-5.41854,-10 0/0:62.6083:14:14:492:0:0:0,-4.21442,-10 0/0:89.701:23:23:864:0:0:0,-6.92369,-10 0/0:74.6495:18:18:665:0:0:0,-5.41854,-10 0/0:35.5156:5:5:190:0:0:0,-1.50515,-10 0/0:47.5568:9:9:317:0:0:0,-2.70927,-10 0/0:99:34:34:1242:0:0:0,-10,-10 0/0:95.7215:25:25:915:0:0:0,-7.52575,-10 0/0:99:27:27:1022:0:0:0,-8.12781,-10 0/0:99:31:31:1138:0:0:0,-9.33193,-10 0/0:99:28:28:1010:0:0:0,-8.42884,-10 0/0:38.5259:6:6:219:0:0:0,-1.80618,-10 0/0:86.6902:22:22:790:0:0:0,-6.62266,-10 0/0:77.6597:19:19:694:0:0:0,-5.71957,-10 0/0:35.5156:5:5:186:0:0:0,-1.50515,-10 0/0:95.7215:25:25:936:0:0:0,-7.52575,-10 0/0:89.701:23:23:864:0:0:0,-6.92369,-10 0/0:83.6802:21:21:755:0:0:0,-6.32163,-10 scaffold_46 4740025 . C A 2637.96 . AB=0.534884;ABP=4.37378;AC=11;AF=0.0597826;AN=184;AO=101;CIGAR=1X;DP=1374;DPB=1374;DPRA=1.22405;EPP=4.75178;EPPR=7.63366;GTI=1;LEN=1;MEANALT=1.11111;MQM=59.9208;MQMR=59.9528;NS=92;NUMALT=1;ODDS=0.548726;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3694;QR=46462;RO=1270;RPP=222.329;RPPR=2760.78;RUN=1;SAF=46;SAP=4.75178;SAR=55;SRF=609;SRP=7.63366;SRR=661;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:42.8299:11:11:416:0:0:0,-3.31133,-10 0/0:30.7887:7:7:243:0:0:0,-2.10721,-10 0/0:51.8608:14:14:502:0:0:0,-4.21442,-10 0/0:42.8299:11:11:413:0:0:0,-3.31133,-10 0/0:45.8402:12:12:454:0:0:0,-3.61236,-10 0/0:21.7578:4:4:152:0:0:0,-1.20412,-10 0/0:87.9839:26:26:933:0:0:0,-7.82678,-10 0/0:78.9534:23:23:866:0:0:0,-6.92369,-10 0/0:39.8196:10:10:357:0:0:0,-3.0103,-10 0/0:24.7681:5:5:186:0:0:0,-1.50515,-10 0/0:27.7784:6:6:228:0:0:0,-1.80618,-10 0/0:24.7681:5:5:166:0:0:0,-1.50515,-10 0/1:99:20:13:481:7:264:-10,0,-10 0/0:99:30:30:1129:0:0:0,-9.0309,-10 0/0:72.9329:21:21:767:0:0:0,-6.32163,-10 0/0:81.9636:24:24:872:0:0:0,-7.22472,-10 0/1:99:22:13:494:9:320:-10,0,-10 0/0:42.8299:11:11:416:0:0:0,-3.31133,-10 0/0:42.8299:11:11:417:0:0:0,-3.31133,-10 0/0:90.9949:27:27:1019:0:0:0,-8.12781,-10 0/0:63.902:18:18:651:0:0:0,-5.41854,-10 0/0:54.8711:15:15:531:0:0:0,-4.51545,-10 0/0:54.8711:15:15:550:0:0:0,-4.51545,-10 0/0:57.8814:16:16:599:0:0:0,-4.81648,-10 0/0:57.8814:16:16:587:0:0:0,-4.81648,-10 0/0:60.8917:17:17:618:0:0:0,-5.11751,-10 0/0:39.8196:10:10:380:0:0:0,-3.0103,-10 0/0:39.8196:10:10:354:0:0:0,-3.0103,-10 0/0:48.8505:13:13:447:0:0:0,-3.91339,-10 0/0:84.9738:25:25:918:0:0:0,-7.52575,-10 0/0:27.7784:6:6:228:0:0:0,-1.80618,-10 0/0:42.8299:11:11:418:0:0:0,-3.31133,-10 0/0:39.8196:10:10:358:0:0:0,-3.0103,-10 0/0:30.7887:7:7:243:0:0:0,-2.10721,-10 0/0:51.8608:15:14:530:0:0:0,-4.21442,-10 0/0:33.799:8:8:265:0:0:0,-2.40824,-10 0/0:51.8608:14:14:528:0:0:0,-4.21442,-10 0/0:57.8814:16:16:596:0:0:0,-4.81648,-10 0/0:51.8608:14:14:479:0:0:0,-4.21442,-10 0/0:48.8505:13:13:447:0:0:0,-3.91339,-10 0/0:87.9839:26:26:959:0:0:0,-7.82678,-10 0/0:48.8505:13:13:490:0:0:0,-3.91339,-10 0/0:60.8917:17:17:626:0:0:0,-5.11751,-10 0/0:66.9123:19:19:697:0:0:0,-5.71957,-10 0/0:45.8402:12:12:456:0:0:0,-3.61236,-10 0/0:36.8093:9:9:341:0:0:0,-2.70927,-10 0/0:99:36:36:1350:0:0:0,-10,-10 0/0:66.9123:19:19:688:0:0:0,-5.71957,-10 0/0:36.8093:9:9:307:0:0:0,-2.70927,-10 0/0:99:31:31:1122:0:0:0,-9.33193,-10 0/0:45.8402:12:12:434:0:0:0,-3.61236,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/0:39.8196:10:10:368:0:0:0,-3.0103,-10 0/0:27.7784:6:6:228:0:0:0,-1.80618,-10 0/0:99:35:35:1224:0:0:0,-10,-10 0/0:33.799:8:8:304:0:0:0,-2.40824,-10 0/0:42.8299:11:11:416:0:0:0,-3.31133,-10 0/0:21.7578:4:4:152:0:0:0,-1.20412,-10 0/0:51.8608:14:14:525:0:0:0,-4.21442,-10 0/0:30.7887:7:7:266:0:0:0,-2.10721,-10 0/0:81.9636:24:24:879:0:0:0,-7.22472,-10 1/1:45.631:22:0:0:22:815:-10,-6.62266,0 0/1:99:26:10:364:15:560:-10,0,-10 0/0:51.8608:14:14:500:0:0:0,-4.21442,-10 0/1:1.61685:10:0:0:10:336:-10,-3.0103,0 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/1:99:16:7:265:9:340:-10,0,-10 0/0:30.7887:7:7:242:0:0:0,-2.10721,-10 0/1:99:23:10:369:13:474:-10,0,-10 0/0:36.8093:9:9:341:0:0:0,-2.70927,-10 0/0:69.9226:20:20:703:0:0:0,-6.0206,-10 0/0:57.8814:16:16:559:0:0:0,-4.81648,-10 0/0:54.8711:15:15:555:0:0:0,-4.51545,-10 0/0:42.8299:11:11:360:0:0:0,-3.31133,-10 0/0:75.9431:22:22:826:0:0:0,-6.62266,-10 0/0:30.7887:7:7:243:0:0:0,-2.10721,-10 1/1:9.50743:10:0:0:10:357:-10,-3.0103,0 0/0:33.799:8:8:298:0:0:0,-2.40824,-10 0/0:24.7681:5:5:189:0:0:0,-1.50515,-10 0/0:30.7887:7:7:261:0:0:0,-2.10721,-10 0/0:81.9636:24:24:897:0:0:0,-7.22472,-10 0/0:60.8917:17:17:631:0:0:0,-5.11751,-10 0/0:75.9431:22:22:766:0:0:0,-6.62266,-10 0/1:99:12:6:228:6:228:-10,0,-10 0/0:75.9431:23:22:772:0:0:0,-6.62266,-10 0/0:30.7887:7:7:261:0:0:0,-2.10721,-10 0/0:42.8299:11:11:386:0:0:0,-3.31133,-10 0/0:39.8196:10:10:371:0:0:0,-3.0103,-10 0/0:27.7784:6:6:228:0:0:0,-1.80618,-10 0/0:60.8917:17:17:637:0:0:0,-5.11751,-10 0/0:48.8505:13:13:486:0:0:0,-3.91339,-10 0/0:42.8299:11:11:409:0:0:0,-3.31133,-10 scaffold_46 4822508 . C T 1355.16 . AB=0.5;ABP=3.0103;AC=3;AF=0.0163043;AN=184;AO=52;CIGAR=1X;DP=1865;DPB=1865;DPRA=1.78094;EPP=5.68288;EPPR=5.88603;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9857;NS=92;NUMALT=1;ODDS=0.582139;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1906;QR=66256;RO=1813;RPP=115.927;RPPR=3931.21;RUN=1;SAF=22;SAP=5.68288;SAR=30;SRF=930;SRP=5.65607;SRR=883;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.8307:17:17:617:0:0:0,-5.11751,-10 0/0:42.8101:15:15:565:0:0:0,-4.51545,-10 0/0:69.9028:24:24:886:0:0:0,-7.22472,-10 0/0:21.738:8:8:303:0:0:0,-2.40824,-10 0/0:66.8925:23:23:869:0:0:0,-6.92369,-10 0/0:27.7586:10:10:376:0:0:0,-3.0103,-10 1/1:78.6051:33:0:0:33:1223:-10,-9.93399,0 0/0:63.8822:22:22:812:0:0:0,-6.62266,-10 0/0:39.7998:14:14:488:0:0:0,-4.21442,-10 0/0:6.68651:3:3:114:0:0:0,-0.90309,-10 0/0:24.7483:9:9:340:0:0:0,-2.70927,-10 0/0:18.7277:7:7:266:0:0:0,-2.10721,-10 0/0:78.9337:27:27:994:0:0:0,-8.12781,-10 0/0:72.9131:25:25:907:0:0:0,-7.52575,-10 0/0:81.944:28:28:1024:0:0:0,-8.42884,-10 0/0:81.944:28:28:1011:0:0:0,-8.42884,-10 0/1:99:38:19:694:19:683:-10,0,-10 0/0:27.7586:10:10:378:0:0:0,-3.0103,-10 0/0:87.9641:30:30:1095:0:0:0,-9.0309,-10 0/0:99:39:39:1451:0:0:0,-10,-10 0/0:63.8822:22:22:825:0:0:0,-6.62266,-10 0/0:75.9234:26:26:923:0:0:0,-7.82678,-10 0/0:18.7277:7:7:266:0:0:0,-2.10721,-10 0/0:87.9641:30:30:1102:0:0:0,-9.0309,-10 0/0:60.8719:21:21:767:0:0:0,-6.32163,-10 0/0:57.8616:20:20:757:0:0:0,-6.0206,-10 0/0:48.8307:17:17:559:0:0:0,-5.11751,-10 0/0:21.738:8:8:304:0:0:0,-2.40824,-10 0/0:60.8719:21:21:775:0:0:0,-6.32163,-10 0/0:99:44:44:1595:0:0:0,-10,-10 0/0:12.7071:5:5:168:0:0:0,-1.50515,-10 0/0:30.7689:11:11:394:0:0:0,-3.31133,-10 0/0:60.8719:21:21:782:0:0:0,-6.32163,-10 0/0:39.7998:14:14:527:0:0:0,-4.21442,-10 0/0:78.9337:27:27:982:0:0:0,-8.12781,-10 0/0:33.7792:12:12:448:0:0:0,-3.61236,-10 0/0:36.7895:13:13:414:0:0:0,-3.91339,-10 0/0:96.9914:33:33:1181:0:0:0,-9.93399,-10 0/0:69.9028:24:24:910:0:0:0,-7.22472,-10 0/0:33.7792:12:12:452:0:0:0,-3.61236,-10 0/0:99:36:36:1293:0:0:0,-10,-10 0/0:90.9751:31:31:1135:0:0:0,-9.33193,-10 0/0:36.7895:13:13:467:0:0:0,-3.91339,-10 0/0:75.9234:26:26:914:0:0:0,-7.82678,-10 0/0:48.8307:17:17:619:0:0:0,-5.11751,-10 0/0:54.8513:19:19:689:0:0:0,-5.71957,-10 0/0:99:35:35:1298:0:0:0,-10,-10 0/0:78.9337:27:27:998:0:0:0,-8.12781,-10 0/0:54.8513:19:19:712:0:0:0,-5.71957,-10 0/0:99:42:42:1514:0:0:0,-10,-10 0/0:33.7792:12:12:417:0:0:0,-3.61236,-10 0/0:93.9856:32:32:1208:0:0:0,-9.63296,-10 0/0:30.7689:11:11:365:0:0:0,-3.31133,-10 0/0:15.7174:6:6:228:0:0:0,-1.80618,-10 0/0:99:35:35:1290:0:0:0,-10,-10 0/0:27.7586:10:10:362:0:0:0,-3.0103,-10 0/0:75.9234:26:26:889:0:0:0,-7.82678,-10 0/0:24.7483:9:9:323:0:0:0,-2.70927,-10 0/0:54.8513:19:19:708:0:0:0,-5.71957,-10 0/0:36.7895:13:13:446:0:0:0,-3.91339,-10 0/0:81.944:28:28:1032:0:0:0,-8.42884,-10 0/0:60.8719:21:21:776:0:0:0,-6.32163,-10 0/0:90.9751:31:31:1104:0:0:0,-9.33193,-10 0/0:60.8719:21:21:762:0:0:0,-6.32163,-10 0/0:30.7689:11:11:412:0:0:0,-3.31133,-10 0/0:78.9337:27:27:1016:0:0:0,-8.12781,-10 0/0:81.944:28:28:999:0:0:0,-8.42884,-10 0/0:18.7277:7:7:251:0:0:0,-2.10721,-10 0/0:99:34:34:1267:0:0:0,-10,-10 0/0:30.7689:11:11:413:0:0:0,-3.31133,-10 0/0:51.841:18:18:658:0:0:0,-5.41854,-10 0/0:78.9337:27:27:963:0:0:0,-8.12781,-10 0/0:99:41:41:1457:0:0:0,-10,-10 0/0:30.7689:11:11:413:0:0:0,-3.31133,-10 0/0:60.8719:21:21:777:0:0:0,-6.32163,-10 0/0:45.8204:16:16:605:0:0:0,-4.81648,-10 0/0:45.8204:16:16:571:0:0:0,-4.81648,-10 0/0:42.8101:15:15:559:0:0:0,-4.51545,-10 0/0:6.68651:3:3:110:0:0:0,-0.90309,-10 0/0:30.7689:11:11:405:0:0:0,-3.31133,-10 0/0:99:38:38:1376:0:0:0,-10,-10 0/0:87.9641:30:30:1102:0:0:0,-9.0309,-10 0/0:57.8616:20:20:719:0:0:0,-6.0206,-10 0/0:63.8822:22:22:830:0:0:0,-6.62266,-10 0/0:75.9234:26:26:972:0:0:0,-7.82678,-10 0/0:15.7174:6:6:214:0:0:0,-1.80618,-10 0/0:42.8101:15:15:557:0:0:0,-4.51545,-10 0/0:45.8204:16:16:596:0:0:0,-4.81648,-10 0/0:21.738:8:8:303:0:0:0,-2.40824,-10 0/0:69.9028:24:24:893:0:0:0,-7.22472,-10 0/0:39.7998:14:14:521:0:0:0,-4.21442,-10 0/0:33.7792:12:12:427:0:0:0,-3.61236,-10 scaffold_46 5087584 . A G 423.781 . AB=0.594595;ABP=5.88603;AC=2;AF=0.0108696;AN=184;AO=25;CIGAR=1X;DP=2071;DPB=2071;DPRA=1.08917;EPP=3.09716;EPPR=3.02728;GTI=1;LEN=1;MEANALT=1;MQM=59.96;MQMR=59.8915;NS=92;NUMALT=1;ODDS=9.65256;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=786;QR=74694;RO=2046;RPP=57.2971;RPPR=4445.84;RUN=1;SAF=13;SAP=3.09716;SAR=12;SRF=1021;SRP=3.02728;SRR=1025;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:25:25:909:0:0:0,-7.52575,-10 0/0:69.0141:12:12:411:0:0:0,-3.61236,-10 0/1:99:24:15:568:9:289:-10,0,-10 0/1:0.000166546:13:0:0:13:410:-10,-3.91339,0 0/0:78.0449:15:15:569:0:0:0,-4.51545,-10 0/0:69.0141:12:12:456:0:0:0,-3.61236,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:60.1294:25:24:821:1:35:0,-2.62781,-10 0/0:69.0141:12:12:440:0:0:0,-3.61236,-10 0/0:53.9626:7:7:243:0:0:0,-2.10721,-10 0/0:69.0141:12:12:446:0:0:0,-3.61236,-10 0/0:69.0141:12:12:455:0:0:0,-3.61236,-10 0/0:99:31:31:1087:0:0:0,-9.33193,-10 0/0:99:22:22:822:0:0:0,-6.62266,-10 0/0:99:39:39:1430:0:0:0,-10,-10 0/0:99:35:35:1254:0:0:0,-10,-10 0/0:99:32:32:1153:0:0:0,-9.63296,-10 0/0:78.0449:15:15:562:0:0:0,-4.51545,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:99:42:42:1514:0:0:0,-10,-10 0/0:69.0141:12:12:434:0:0:0,-3.61236,-10 0/0:99:25:25:850:0:0:0,-7.52575,-10 0/0:93.0969:20:20:751:0:0:0,-6.0206,-10 0/0:93.0969:20:20:747:0:0:0,-6.0206,-10 0/0:99:26:26:965:0:0:0,-7.82678,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:96.1076:21:21:782:0:0:0,-6.32163,-10 0/0:78.0449:15:15:547:0:0:0,-4.51545,-10 0/0:84.0654:17:17:610:0:0:0,-5.11751,-10 0/0:99:40:40:1439:0:0:0,-10,-10 0/0:41.9214:3:3:104:0:0:0,-0.90309,-9.70667 0/0:50.9523:6:6:227:0:0:0,-1.80618,-10 0/0:96.1076:21:21:715:0:0:0,-6.32163,-10 0/0:78.0449:15:15:528:0:0:0,-4.51545,-10 0/0:96.1076:21:21:792:0:0:0,-6.32163,-10 0/0:78.0449:15:15:561:0:0:0,-4.51545,-10 0/0:62.9935:10:10:350:0:0:0,-3.0103,-10 0/0:99:36:36:1291:0:0:0,-10,-10 0/0:81.0552:16:16:597:0:0:0,-4.81648,-10 0/0:78.0449:15:15:544:0:0:0,-4.51545,-10 0/0:99:47:47:1746:0:0:0,-10,-10 0/0:83.9694:26:25:945:1:14:0,-5.01181,-10 0/0:99:22:22:805:0:0:0,-6.62266,-10 0/0:99:36:36:1280:0:0:0,-10,-10 0/0:93.0969:20:20:745:0:0:0,-6.0206,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 0/0:99:58:58:2148:0:0:0,-10,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/0:53.9626:7:7:239:0:0:0,-2.10721,-10 0/0:99:36:36:1298:0:0:0,-10,-10 0/0:96.1076:21:21:735:0:0:0,-6.32163,-10 0/0:99:32:32:1208:0:0:0,-9.63296,-10 0/0:84.0654:17:17:600:0:0:0,-5.11751,-10 0/0:62.9935:10:10:363:0:0:0,-3.0103,-10 0/0:99:54:54:1995:0:0:0,-10,-10 0/0:96.1076:21:21:771:0:0:0,-6.32163,-10 0/0:99:27:27:1000:0:0:0,-8.12781,-10 0/0:72.0244:13:13:483:0:0:0,-3.91339,-10 0/0:96.1076:21:21:728:0:0:0,-6.32163,-10 0/0:72.0244:13:13:462:0:0:0,-3.91339,-10 0/0:99:26:26:953:0:0:0,-7.82678,-10 0/0:62.9935:10:10:357:0:0:0,-3.0103,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:99:29:29:1091:0:0:0,-8.72987,-10 0/0:87.0755:18:18:671:0:0:0,-5.41854,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:99:26:26:956:0:0:0,-7.82678,-10 0/0:62.9935:10:10:376:0:0:0,-3.0103,-10 0/0:99:39:39:1467:0:0:0,-10,-10 0/0:90.0854:19:19:707:0:0:0,-5.71957,-10 0/0:99:25:25:944:0:0:0,-7.52575,-10 0/0:99:38:38:1360:0:0:0,-10,-10 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:84.0654:17:17:644:0:0:0,-5.11751,-10 0/0:99:27:27:891:0:0:0,-8.12781,-10 0/0:96.1076:21:21:793:0:0:0,-6.32163,-10 0/0:72.0244:13:13:487:0:0:0,-3.91339,-10 0/0:78.0449:15:15:533:0:0:0,-4.51545,-10 0/0:41.9214:3:3:92:0:0:0,-0.90309,-8.58667 0/0:84.0654:17:17:634:0:0:0,-5.11751,-10 0/0:82.8866:34:33:1209:1:38:0,-4.90354,-10 0/0:99:43:43:1532:0:0:0,-10,-10 0/0:99:24:24:883:0:0:0,-7.22472,-10 0/0:99:27:27:978:0:0:0,-8.12781,-10 0/0:93.0969:20:20:746:0:0:0,-6.0206,-10 0/0:56.9729:8:8:292:0:0:0,-2.40824,-10 0/0:96.1076:21:21:779:0:0:0,-6.32163,-10 0/0:99:22:22:772:0:0:0,-6.62266,-10 0/0:62.9935:10:10:351:0:0:0,-3.0103,-10 0/0:87.0755:18:18:678:0:0:0,-5.41854,-10 0/0:99:25:25:900:0:0:0,-7.52575,-10 0/0:87.0755:18:18:669:0:0:0,-5.41854,-10 scaffold_56 1447 . A G 5418.2 . AB=0.48954;ABP=3.23744;AC=15;AF=0.0815217;AN=184;AO=195;CIGAR=1X;DP=2130;DPB=2130;DPRA=1.34236;EPP=3.9123;EPPR=4.80676;GTI=1;LEN=1;MEANALT=1;MQM=43.9744;MQMR=59.5414;NS=92;NUMALT=1;ODDS=1.90453;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7212;QR=70639;RO=1934;RPP=426.447;RPPR=4202.64;RUN=1;SAF=93;SAP=3.9123;SAR=102;SRF=947;SRP=4.80676;SRR=987;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:38.2993:11:11:402:0:0:0,-3.31133,-10 0/0:38.2993:11:11:387:0:0:0,-3.31133,-10 0/0:83.4537:26:26:933:0:0:0,-7.82678,-10 0/0:38.2993:11:11:413:0:0:0,-3.31133,-10 0/0:56.3611:17:17:635:0:0:0,-5.11751,-10 1/1:9.95257:12:0:0:12:455:-10,-3.61236,0 0/0:99:50:50:1868:0:0:0,-10,-10 0/0:95.4933:30:30:1121:0:0:0,-9.0309,-10 0/0:44.3199:13:13:480:0:0:0,-3.91339,-10 0/1:0.00347985:2:0:0:2:76:-7.22,-0.60206,0 0/0:35.289:10:10:350:0:0:0,-3.0103,-10 0/0:29.2684:8:8:300:0:0:0,-2.40824,-10 0/0:89.474:28:28:1007:0:0:0,-8.42884,-10 0/1:99:29:17:633:12:454:-10,0,-10 0/0:47.3302:14:14:511:0:0:0,-4.21442,-10 0/0:77.4331:24:24:872:0:0:0,-7.22472,-10 0/0:62.3817:19:19:710:0:0:0,-5.71957,-10 0/0:29.2684:8:8:304:0:0:0,-2.40824,-10 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:99:34:34:1243:0:0:0,-10,-10 0/1:99:29:15:562:14:505:-10,0,-10 0/0:86.4639:27:27:996:0:0:0,-8.12781,-10 0/0:41.3096:12:12:412:0:0:0,-3.61236,-10 0/0:77.4331:24:24:888:0:0:0,-7.22472,-10 0/0:83.4537:26:26:975:0:0:0,-7.82678,-10 0/0:77.3058:41:40:1453:1:38:0,-6.92945,-10 0/0:83.4537:26:26:968:0:0:0,-7.82678,-10 0/0:50.3405:15:15:547:0:0:0,-4.51545,-10 1/1:76.1791:34:0:0:34:1253:-10,-10,0 0/1:99:48:22:827:26:956:-10,0,-10 0/0:14.2169:3:3:109:0:0:0,-0.90309,-10 0/0:23.2478:6:6:228:0:0:0,-1.80618,-10 0/0:68.4023:21:21:766:0:0:0,-6.32163,-10 0/0:65.392:20:20:748:0:0:0,-6.0206,-10 0/0:47.3302:14:14:517:0:0:0,-4.21442,-10 0/0:35.289:10:10:379:0:0:0,-3.0103,-10 0/0:38.2993:11:11:403:0:0:0,-3.31133,-10 0/0:89.474:28:28:1013:0:0:0,-8.42884,-10 0/0:35.289:10:10:356:0:0:0,-3.0103,-10 0/0:71.4126:22:22:785:0:0:0,-6.62266,-10 0/0:99:37:37:1314:0:0:0,-10,-10 0/0:65.392:20:20:678:0:0:0,-6.0206,-10 0/0:71.4126:22:22:787:0:0:0,-6.62266,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:89.474:29:28:987:0:0:0,-8.42884,-10 0/1:99:17:10:374:7:264:-10,0,-10 0/1:99:53:24:835:29:1073:-10,0,-10 0/0:99:36:36:1295:0:0:0,-10,-10 0/0:74.4229:23:23:867:0:0:0,-6.92369,-10 0/0:99:60:60:2102:0:0:0,-10,-10 0/0:71.4126:22:22:820:0:0:0,-6.62266,-10 0/0:99:57:57:2033:0:0:0,-10,-10 0/0:44.3199:13:13:474:0:0:0,-3.91339,-10 0/0:41.3096:12:12:438:0:0:0,-3.61236,-10 0/1:99:61:34:1258:27:989:-10,0,-10 1/1:28.0144:18:0:0:18:663:-10,-5.41854,0 0/0:62.3817:19:19:718:0:0:0,-5.71957,-10 0/0:14.2169:3:3:114:0:0:0,-0.90309,-10 0/0:95.4933:30:30:1121:0:0:0,-9.0309,-10 0/0:56.3611:17:17:640:0:0:0,-5.11751,-10 0/0:99:36:36:1363:0:0:0,-10,-10 0/0:89.474:28:28:1035:0:0:0,-8.42884,-10 0/0:99:45:45:1629:0:0:0,-10,-10 0/0:71.4126:22:22:830:0:0:0,-6.62266,-10 0/0:38.2993:11:11:391:0:0:0,-3.31133,-10 0/0:86.4639:27:27:977:0:0:0,-8.12781,-10 0/0:35.289:10:10:370:0:0:0,-3.0103,-10 0/0:50.3405:15:15:543:0:0:0,-4.51545,-10 0/0:99:39:39:1434:0:0:0,-10,-10 0/0:29.2684:8:8:302:0:0:0,-2.40824,-10 0/0:99:33:33:1187:0:0:0,-9.93399,-10 0/0:99:50:50:1819:0:0:0,-10,-10 0/0:92.4838:29:29:1062:0:0:0,-8.72987,-10 0/0:53.3508:16:16:573:0:0:0,-4.81648,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:59.3714:18:18:670:0:0:0,-5.41854,-10 0/0:86.4639:27:27:1002:0:0:0,-8.12781,-10 0/0:41.3096:12:12:450:0:0:0,-3.61236,-10 0/0:14.2169:3:3:114:0:0:0,-0.90309,-10 0/0:50.3405:15:15:547:0:0:0,-4.51545,-10 0/0:99:51:51:1834:0:0:0,-10,-10 0/0:99:48:48:1737:0:0:0,-10,-10 0/0:77.4331:24:24:871:0:0:0,-7.22472,-10 0/0:77.4331:24:24:881:0:0:0,-7.22472,-10 0/0:83.4537:26:26:938:0:0:0,-7.82678,-10 0/0:14.2169:3:3:114:0:0:0,-0.90309,-10 0/0:62.3817:19:19:689:0:0:0,-5.71957,-10 1/1:12.9629:13:0:0:13:486:-10,-3.91339,0 0/0:38.2993:11:11:382:0:0:0,-3.31133,-10 0/0:23.2478:6:6:221:0:0:0,-1.80618,-10 0/0:53.3508:16:16:593:0:0:0,-4.81648,-10 0/0:47.3302:14:14:493:0:0:0,-4.21442,-10 scaffold_56 1468 . G C 3838.17 . AB=0.5;ABP=3.0103;AC=12;AF=0.0652174;AN=184;AO=148;CIGAR=1X;DP=2130;DPB=2130;DPRA=1.18297;EPP=3.94932;EPPR=5.86715;GTI=1;LEN=1;MEANALT=1;MQM=59.5541;MQMR=58.0126;NS=92;NUMALT=1;ODDS=1.26065;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5313;QR=72088;RO=1977;RPP=324.388;RPPR=4296.01;RUN=1;SAF=78;SAP=3.94932;SAR=70;SRF=963;SRP=5.86715;SRR=1014;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.851:11:11:408:0:0:0,-3.31133,-10 0/0:48.851:11:11:371:0:0:0,-3.31133,-10 0/0:94.0048:26:26:940:0:0:0,-7.82678,-10 0/0:48.851:11:11:408:0:0:0,-3.31133,-10 0/0:66.9128:17:17:630:0:0:0,-5.11751,-10 0/0:51.8613:12:12:430:0:0:0,-3.61236,-10 0/1:99:50:31:1118:19:722:-10,0,-10 0/1:99:30:17:643:13:446:-10,0,-10 0/1:0.509202:13:0:0:13:486:-10,-3.91339,0 0/0:21.7583:2:2:76:0:0:0,-0.60206,-7.22 0/0:45.8407:10:10:379:0:0:0,-3.0103,-10 0/0:39.8201:8:8:303:0:0:0,-2.40824,-10 0/0:99:28:28:1040:0:0:0,-8.42884,-10 0/0:99:29:29:1038:0:0:0,-8.72987,-10 0/0:57.8819:14:14:508:0:0:0,-4.21442,-10 0/0:87.9847:24:24:855:0:0:0,-7.22472,-10 0/0:72.9334:19:19:686:0:0:0,-5.71957,-10 0/0:39.8201:8:8:282:0:0:0,-2.40824,-10 0/1:99:32:13:493:19:715:-10,0,-10 0/0:99:34:34:1253:0:0:0,-10,-10 0/0:76.6553:29:28:1044:1:15:0,-5.76747,-10 0/0:97.0144:27:27:993:0:0:0,-8.12781,-10 0/0:51.8613:12:12:444:0:0:0,-3.61236,-10 0/0:87.9847:24:24:870:0:0:0,-7.22472,-10 0/0:90.9949:26:25:937:0:0:0,-7.52575,-10 0/0:99:41:40:1408:1:15:0,-9.22945,-10 0/0:94.0048:26:26:900:0:0:0,-7.82678,-10 0/0:60.8922:15:15:558:0:0:0,-4.51545,-10 0/0:99:34:34:1238:0:0:0,-10,-10 0/0:99:48:48:1797:0:0:0,-10,-10 0/0:24.7686:3:3:111:0:0:0,-0.90309,-10 0/0:33.7995:6:6:222:0:0:0,-1.80618,-10 0/0:39.9747:21:20:735:1:29:0,-2.09941,-10 0/0:75.9437:20:20:735:0:0:0,-6.0206,-10 0/0:57.8819:14:14:496:0:0:0,-4.21442,-10 0/0:45.8407:10:10:356:0:0:0,-3.0103,-10 0/0:48.851:11:11:363:0:0:0,-3.31133,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:42.8304:10:9:320:0:0:0,-2.70927,-10 0/0:81.9643:22:22:823:0:0:0,-6.62266,-10 0/0:99:37:36:1330:0:0:0,-10,-10 0/0:75.9437:20:20:663:0:0:0,-6.0206,-10 0/0:81.9643:22:22:806:0:0:0,-6.62266,-10 0/0:99:33:33:1183:0:0:0,-9.93399,-10 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:66.9128:17:17:611:0:0:0,-5.11751,-10 0/0:99:53:53:1937:0:0:0,-10,-10 0/0:99:36:36:1351:0:0:0,-10,-10 0/0:84.9745:23:23:849:0:0:0,-6.92369,-10 0/0:99:60:60:2160:0:0:0,-10,-10 0/0:81.9643:22:22:781:0:0:0,-6.62266,-10 0/0:99:57:56:2085:0:0:0,-10,-10 1/1:7.32625:13:0:0:13:475:-10,-3.91339,0 0/0:51.8613:12:12:428:0:0:0,-3.61236,-10 0/0:99:61:61:2225:0:0:0,-10,-10 0/0:69.9231:18:18:638:0:0:0,-5.41854,-10 0/0:72.9334:19:19:720:0:0:0,-5.71957,-10 0/0:24.7686:3:3:114:0:0:0,-0.90309,-10 1/1:58.5014:30:0:0:30:1115:-10,-9.0309,0 1/1:19.3675:17:0:0:17:630:-10,-5.11751,0 0/0:99:36:36:1342:0:0:0,-10,-10 0/0:99:28:28:1034:0:0:0,-8.42884,-10 0/0:99:45:45:1612:0:0:0,-10,-10 0/0:81.9643:22:22:833:0:0:0,-6.62266,-10 0/0:48.851:11:11:411:0:0:0,-3.31133,-10 0/1:99:27:8:298:19:602:-10,0,-10 0/0:45.8407:10:10:375:0:0:0,-3.0103,-10 0/0:60.8922:15:15:550:0:0:0,-4.51545,-10 0/0:99:39:39:1395:0:0:0,-10,-10 0/0:39.8201:8:8:296:0:0:0,-2.40824,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:99:50:50:1813:0:0:0,-10,-10 0/0:99:29:28:1044:0:0:0,-8.42884,-10 0/0:63.9025:16:16:581:0:0:0,-4.81648,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/1:17.383:18:16:576:2:63:-2.75115,0,-10 0/0:97.0144:27:27:1012:0:0:0,-8.12781,-10 0/0:51.8613:12:12:449:0:0:0,-3.61236,-10 0/0:24.7686:3:3:112:0:0:0,-0.90309,-10 0/0:60.8922:15:15:537:0:0:0,-4.51545,-10 0/0:99:51:51:1891:0:0:0,-10,-10 0/0:99:48:48:1709:0:0:0,-10,-10 0/0:87.9847:24:24:886:0:0:0,-7.22472,-10 0/0:87.9847:24:24:894:0:0:0,-7.22472,-10 0/0:94.0048:26:26:952:0:0:0,-7.82678,-10 0/0:24.7686:3:3:114:0:0:0,-0.90309,-10 0/0:72.9334:19:19:669:0:0:0,-5.71957,-10 0/0:54.8716:13:13:472:0:0:0,-3.91339,-10 0/0:48.851:11:11:375:0:0:0,-3.31133,-10 0/0:33.7995:6:6:206:0:0:0,-1.80618,-10 0/0:63.9025:16:16:578:0:0:0,-4.81648,-10 0/0:57.8819:14:14:520:0:0:0,-4.21442,-10 scaffold_56 21280 . G A 1409.37 . AB=0.662651;ABP=22.0826;AC=3;AF=0.0163043;AN=184;AO=56;CIGAR=1X;DP=2269;DPB=2269;DPRA=1.06747;EPP=4.40625;EPPR=3.32836;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9887;NS=92;NUMALT=1;ODDS=1.05939;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2007;QR=80644;RO=2212;RPP=124.613;RPPR=4806.31;RUN=1;SAF=31;SAP=4.40625;SAR=25;SRF=1115;SRP=3.32836;SRR=1097;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.0879:11:11:394:0:0:0,-3.31133,-10 0/0:34.0673:9:9:334:0:0:0,-2.70927,-10 0/0:64.1703:19:19:647:0:0:0,-5.71957,-10 0/0:70.1909:21:21:756:0:0:0,-6.32163,-10 0/0:67.1806:20:20:750:0:0:0,-6.0206,-10 0/0:43.0982:12:12:448:0:0:0,-3.61236,-10 0/0:99:48:48:1765:0:0:0,-10,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:91.2618:28:28:1038:0:0:0,-8.42884,-10 0/0:16.0055:3:3:111:0:0:0,-0.90309,-10 0/0:34.0673:9:9:340:0:0:0,-2.70927,-10 0/0:22.0261:5:5:182:0:0:0,-1.50515,-10 0/0:99:35:35:1238:0:0:0,-10,-10 0/0:99:32:32:1187:0:0:0,-9.63296,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:73.2012:22:22:787:0:0:0,-6.62266,-10 0/0:49.1188:14:14:528:0:0:0,-4.21442,-10 0/0:94.2708:29:29:1060:0:0:0,-8.72987,-10 0/0:99:52:52:1940:0:0:0,-10,-10 0/1:99:26:9:328:17:592:-10,0,-10 0/0:99:39:39:1442:0:0:0,-10,-10 0/0:46.1085:13:13:472:0:0:0,-3.91339,-10 0/0:70.1909:21:21:793:0:0:0,-6.32163,-10 0/0:82.232:25:25:937:0:0:0,-7.52575,-10 0/0:99:49:49:1819:0:0:0,-10,-10 0/0:97.2786:30:30:1126:0:0:0,-9.0309,-10 0/0:76.2115:23:23:842:0:0:0,-6.92369,-10 0/0:76.2115:23:23:811:0:0:0,-6.92369,-10 0/0:99:35:35:1286:0:0:0,-10,-10 0/0:22.0261:5:5:171:0:0:0,-1.50515,-10 0/0:22.0261:5:5:181:0:0:0,-1.50515,-10 0/0:88.2521:27:27:986:0:0:0,-8.12781,-10 0/0:37.0776:10:10:333:0:0:0,-3.0103,-10 0/0:61.16:18:18:651:0:0:0,-5.41854,-10 0/0:37.0776:10:10:380:0:0:0,-3.0103,-10 0/0:31.057:8:8:282:0:0:0,-2.40824,-10 0/0:76.2115:23:23:845:0:0:0,-6.92369,-10 0/1:1.21269:15:0:0:15:544:-10,-4.51545,0 0/0:61.16:18:18:675:0:0:0,-5.41854,-10 0/0:99:41:41:1530:0:0:0,-10,-10 0/0:70.1909:21:21:748:0:0:0,-6.32163,-10 0/0:85.2425:26:26:969:0:0:0,-7.82678,-10 0/1:99:42:19:674:23:836:-10,0,-10 0/0:94.2708:29:29:1054:0:0:0,-8.72987,-10 0/0:27.356:22:21:763:1:35:0,-1.78024,-10 0/0:99:66:66:2460:0:0:0,-10,-10 0/0:99:31:31:1105:0:0:0,-9.33193,-10 0/0:52.1291:15:15:560:0:0:0,-4.51545,-10 0/0:99:45:45:1632:0:0:0,-10,-10 0/0:31.057:8:8:304:0:0:0,-2.40824,-10 0/0:99:67:67:2460:0:0:0,-10,-10 0/0:43.0982:12:12:422:0:0:0,-3.61236,-10 0/0:37.0776:10:10:352:0:0:0,-3.0103,-10 0/0:99:60:60:2135:0:0:0,-10,-10 0/0:82.232:25:25:884:0:0:0,-7.52575,-10 0/0:88.2521:27:27:991:0:0:0,-8.12781,-10 0/0:31.057:8:8:280:0:0:0,-2.40824,-10 0/0:88.2521:27:27:906:0:0:0,-8.12781,-10 0/0:61.16:18:18:632:0:0:0,-5.41854,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:97.2786:30:30:1109:0:0:0,-9.0309,-10 0/0:99:50:50:1848:0:0:0,-10,-10 0/0:61.16:18:18:662:0:0:0,-5.41854,-10 0/0:49.1188:14:14:516:0:0:0,-4.21442,-10 0/0:99:38:38:1386:0:0:0,-10,-10 0/0:79.2219:24:24:875:0:0:0,-7.22472,-10 0/0:49.1188:14:14:510:0:0:0,-4.21442,-10 0/0:99:55:55:1947:0:0:0,-10,-10 0/0:46.1085:13:13:473:0:0:0,-3.91339,-10 0/0:88.2521:27:27:1012:0:0:0,-8.12781,-10 0/0:99:44:44:1617:0:0:0,-10,-10 0/0:99:42:42:1474:0:0:0,-10,-10 0/0:67.1806:20:20:730:0:0:0,-6.0206,-10 0/0:99:50:50:1814:0:0:0,-10,-10 0/0:31.057:9:8:293:0:0:0,-2.40824,-10 0/0:49.1188:14:14:531:0:0:0,-4.21442,-10 0/0:58.1497:17:17:616:0:0:0,-5.11751,-10 0/0:31.057:8:8:278:0:0:0,-2.40824,-10 0/0:34.0673:9:9:335:0:0:0,-2.70927,-10 0/0:99:40:40:1487:0:0:0,-10,-10 0/0:99:39:39:1420:0:0:0,-10,-10 0/0:64.1703:19:19:717:0:0:0,-5.71957,-10 0/0:94.2708:29:29:1072:0:0:0,-8.72987,-10 0/0:76.2115:23:23:823:0:0:0,-6.92369,-10 0/0:28.0467:7:7:232:0:0:0,-2.10721,-10 0/0:64.1703:19:19:690:0:0:0,-5.71957,-10 0/0:43.0982:12:12:433:0:0:0,-3.61236,-10 0/0:49.1188:14:14:496:0:0:0,-4.21442,-10 0/0:73.2012:22:22:796:0:0:0,-6.62266,-10 0/0:49.1188:14:14:513:0:0:0,-4.21442,-10 0/0:37.0776:10:10:353:0:0:0,-3.0103,-10 scaffold_56 143855 . G A 392.485 . AB=0.692308;ABP=11.3621;AC=3;AF=0.0163043;AN=184;AO=19;CIGAR=1X;DP=1272;DPB=1272;DPRA=0.695864;EPP=3.12459;EPPR=3.09535;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9448;NS=92;NUMALT=1;ODDS=7.9597;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=682;QR=45403;RO=1251;RPP=44.2683;RPPR=2693.53;RUN=1;SAF=10;SAP=3.12459;SAR=9;SRF=625;SRP=3.01204;SRR=626;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.6771:12:12:429:0:0:0,-3.61236,-10 0/0:43.605:5:5:168:0:0:0,-1.50515,-10 0/0:64.6771:12:12:449:0:0:0,-3.61236,-10 0/0:67.6874:13:13:482:0:0:0,-3.91339,-10 0/0:52.6359:8:8:293:0:0:0,-2.40824,-10 0/0:40.5947:4:4:152:0:0:0,-1.20412,-10 0/0:91.7688:21:21:736:0:0:0,-6.32163,-10 0/0:70.6977:14:14:507:0:0:0,-4.21442,-10 0/0:61.6668:11:11:412:0:0:0,-3.31133,-10 0/0:37.5844:3:3:90:0:0:0,-0.90309,-8.4 0/0:34.5741:2:2:53:0:0:0,-0.60206,-5.035 0/0:46.6153:6:6:196:0:0:0,-1.80618,-10 0/0:99:31:31:1068:0:0:0,-9.33193,-10 0/0:99:26:26:913:0:0:0,-7.82678,-10 0/0:88.7594:20:20:687:0:0:0,-6.0206,-10 0/0:70.6977:14:14:501:0:0:0,-4.21442,-10 0/0:70.6977:14:14:500:0:0:0,-4.21442,-10 0/0:55.6462:9:9:341:0:0:0,-2.70927,-10 0/0:73.708:15:15:545:0:0:0,-4.51545,-10 0/0:99:30:29:1032:0:0:0,-8.72987,-10 0/0:58.6565:10:10:339:0:0:0,-3.0103,-10 0/1:99:13:8:304:5:181:-10,0,-10 0/0:46.6153:6:6:225:0:0:0,-1.80618,-10 0/0:73.708:15:15:544:0:0:0,-4.51545,-10 0/0:67.6874:13:13:481:0:0:0,-3.91339,-10 0/0:42.3808:13:12:448:1:16:0,-1.19945,-10 0/0:70.6977:14:14:473:0:0:0,-4.21442,-10 0/0:49.6256:7:7:261:0:0:0,-2.10721,-10 0/0:76.7183:16:16:579:0:0:0,-4.81648,-10 0/0:99:26:26:957:0:0:0,-7.82678,-10 0/0:46.6153:6:6:228:0:0:0,-1.80618,-10 0/0:40.5947:4:4:152:0:0:0,-1.20412,-10 0/0:55.6462:9:9:332:0:0:0,-2.70927,-10 0/0:52.6359:8:8:295:0:0:0,-2.40824,-10 0/0:70.6977:14:14:532:0:0:0,-4.21442,-10 0/1:1.43673e-05:6:0:0:6:228:-10,-1.80618,0 0/0:73.708:15:15:547:0:0:0,-4.51545,-10 0/0:91.7688:21:21:690:0:0:0,-6.32163,-10 0/0:64.6771:12:12:443:0:0:0,-3.61236,-10 0/0:61.6668:11:11:418:0:0:0,-3.31133,-10 0/0:82.7388:18:18:669:0:0:0,-5.41854,-10 0/0:91.7688:21:21:751:0:0:0,-6.32163,-10 0/0:52.6359:8:8:301:0:0:0,-2.40824,-10 0/0:94.7781:22:22:751:0:0:0,-6.62266,-10 0/0:76.7183:16:16:580:0:0:0,-4.81648,-10 0/0:58.6565:10:10:373:0:0:0,-3.0103,-10 0/0:99:30:30:1035:0:0:0,-9.0309,-10 0/0:82.7388:18:18:678:0:0:0,-5.41854,-10 0/0:67.6874:13:13:482:0:0:0,-3.91339,-10 0/0:99:32:31:1097:0:0:0,-9.33193,-10 0/0:52.6359:8:8:300:0:0:0,-2.40824,-10 0/0:99:24:24:849:0:0:0,-7.22472,-10 0/0:52.6359:8:8:301:0:0:0,-2.40824,-10 0/0:46.6153:6:6:214:0:0:0,-1.80618,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:61.6668:11:11:399:0:0:0,-3.31133,-10 0/0:85.7491:19:19:669:0:0:0,-5.71957,-10 0/0:43.605:5:5:185:0:0:0,-1.50515,-10 0/0:67.6874:13:13:488:0:0:0,-3.91339,-10 0/1:2.87346e-05:7:0:0:7:257:-10,-2.10721,0 0/0:99:25:25:937:0:0:0,-7.52575,-10 0/0:70.6977:14:14:498:0:0:0,-4.21442,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:52.6359:8:8:277:0:0:0,-2.40824,-10 0/0:58.6565:10:10:377:0:0:0,-3.0103,-10 0/0:88.7594:20:20:748:0:0:0,-6.0206,-10 0/0:58.6565:10:10:380:0:0:0,-3.0103,-10 0/0:40.5947:4:4:129:0:0:0,-1.20412,-10 0/0:88.7594:20:20:714:0:0:0,-6.0206,-10 0/0:49.6256:7:7:266:0:0:0,-2.10721,-10 0/0:58.6565:10:10:379:0:0:0,-3.0103,-10 0/0:97.7865:23:23:841:0:0:0,-6.92369,-10 0/0:61.6668:11:11:409:0:0:0,-3.31133,-10 0/0:82.7388:18:18:659:0:0:0,-5.41854,-10 0/0:91.7688:21:21:774:0:0:0,-6.32163,-10 0/0:46.6153:6:6:228:0:0:0,-1.80618,-10 0/0:55.6462:9:9:338:0:0:0,-2.70927,-10 0/0:67.6874:13:13:469:0:0:0,-3.91339,-10 0/0:40.5947:4:4:152:0:0:0,-1.20412,-10 0/0:64.6771:12:12:455:0:0:0,-3.61236,-10 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:94.7781:22:22:806:0:0:0,-6.62266,-10 0/0:82.7388:18:18:666:0:0:0,-5.41854,-10 0/0:85.7491:19:19:721:0:0:0,-5.71957,-10 0/0:64.6771:12:12:441:0:0:0,-3.61236,-10 0/0:49.6256:7:7:254:0:0:0,-2.10721,-10 0/0:67.6874:13:13:494:0:0:0,-3.91339,-10 0/0:52.6359:8:8:304:0:0:0,-2.40824,-10 0/0:46.6153:6:6:218:0:0:0,-1.80618,-10 0/0:61.6668:11:11:357:0:0:0,-3.31133,-10 0/0:73.708:15:15:567:0:0:0,-4.51545,-10 0/0:46.6153:6:6:227:0:0:0,-1.80618,-10 scaffold_56 221420 . C T 360.673 . AB=0.454545;ABP=3.60252;AC=1;AF=0.00549451;AN=182;AO=16;CIGAR=1X;DP=1279;DPB=1279;DPRA=1.81041;EPP=3.0103;EPPR=4.26367;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9707;NS=91;NUMALT=1;ODDS=3.19037;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=550;QR=45669;RO=1263;RPP=29.6108;RPPR=2599.91;RUN=1;SAF=9;SAP=3.55317;SAR=7;SRF=635;SRP=3.09455;SRR=628;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:32.4952:7:7:265:0:0:0,-2.10721,-10 0/0:17.4437:2:2:71:0:0:0,-0.60206,-6.745 0/0:44.5364:11:11:410:0:0:0,-3.31133,-10 0/0:32.4952:7:7:257:0:0:0,-2.10721,-10 0/0:56.5776:15:15:549:0:0:0,-4.51545,-10 0/0:32.4952:7:7:261:0:0:0,-2.10721,-10 0/0:56.5776:15:15:569:0:0:0,-4.51545,-10 0/0:38.0982:17:16:550:1:16:0,-2.28706,-10 0/0:29.4849:6:6:219:0:0:0,-1.80618,-10 .:.:.:.:.:.:.:. 0/0:23.4643:4:4:139:0:0:0,-1.20412,-10 0/0:32.4952:7:7:251:0:0:0,-2.10721,-10 0/0:99:33:33:1163:0:0:0,-9.93399,-10 0/0:99:35:35:1232:0:0:0,-10,-10 0/0:53.5673:14:14:482:0:0:0,-4.21442,-10 0/0:53.5673:14:14:507:0:0:0,-4.21442,-10 0/0:86.6806:25:25:912:0:0:0,-7.52575,-10 0/0:23.4643:4:4:140:0:0:0,-1.20412,-10 0/0:62.5982:17:17:637:0:0:0,-5.11751,-10 0/0:80.66:23:23:857:0:0:0,-6.92369,-10 0/0:41.5261:10:10:377:0:0:0,-3.0103,-10 0/0:89.6908:26:26:977:0:0:0,-7.82678,-10 0/0:23.4643:4:4:150:0:0:0,-1.20412,-10 0/0:56.5776:15:15:543:0:0:0,-4.51545,-10 0/0:74.6394:21:21:733:0:0:0,-6.32163,-10 0/0:65.6085:18:18:626:0:0:0,-5.41854,-10 0/0:38.5158:9:9:292:0:0:0,-2.70927,-10 0/0:56.5776:15:15:544:0:0:0,-4.51545,-10 0/0:44.5364:11:11:413:0:0:0,-3.31133,-10 0/0:99:33:33:1194:0:0:0,-9.93399,-10 0/0:17.4437:2:2:76:0:0:0,-0.60206,-7.22 0/0:59.5879:16:16:545:0:0:0,-4.81648,-10 0/0:50.557:13:13:473:0:0:0,-3.91339,-10 0/0:35.5055:8:8:281:0:0:0,-2.40824,-10 0/0:59.5879:16:16:607:0:0:0,-4.81648,-10 0/0:17.4437:2:2:76:0:0:0,-0.60206,-7.22 0/0:62.5982:17:17:628:0:0:0,-5.11751,-10 0/0:68.6188:19:19:690:0:0:0,-5.71957,-10 0/0:38.5158:9:9:337:0:0:0,-2.70927,-10 0/0:50.557:13:13:442:0:0:0,-3.91339,-10 0/0:95.7093:28:28:1042:0:0:0,-8.42884,-10 0/0:38.5158:9:9:338:0:0:0,-2.70927,-10 0/0:47.5467:12:12:442:0:0:0,-3.61236,-10 0/0:99:36:36:1305:0:0:0,-10,-10 0/0:53.5673:14:14:524:0:0:0,-4.21442,-10 0/0:41.5261:10:10:351:0:0:0,-3.0103,-10 0/0:83.6703:24:24:857:0:0:0,-7.22472,-10 0/0:77.6497:22:22:813:0:0:0,-6.62266,-10 0/0:32.4952:7:7:261:0:0:0,-2.10721,-10 0/1:99:33:18:631:15:534:-10,0,-10 0/0:29.4849:6:6:216:0:0:0,-1.80618,-10 0/0:92.7011:27:27:986:0:0:0,-8.12781,-10 0/0:41.5261:10:10:380:0:0:0,-3.0103,-10 0/0:32.4952:7:7:242:0:0:0,-2.10721,-10 0/0:89.6908:26:26:951:0:0:0,-7.82678,-10 0/0:47.5467:12:12:448:0:0:0,-3.61236,-10 0/0:47.5467:12:12:444:0:0:0,-3.61236,-10 0/0:23.4643:4:4:149:0:0:0,-1.20412,-10 0/0:35.5055:8:8:279:0:0:0,-2.40824,-10 0/0:38.5158:9:9:319:0:0:0,-2.70927,-10 0/0:77.6497:22:22:819:0:0:0,-6.62266,-10 0/0:56.5776:15:15:531:0:0:0,-4.51545,-10 0/0:68.6188:19:19:654:0:0:0,-5.71957,-10 0/0:71.6291:20:20:707:0:0:0,-6.0206,-10 0/0:29.4849:6:6:227:0:0:0,-1.80618,-10 0/0:77.6497:22:22:814:0:0:0,-6.62266,-10 0/0:35.5055:8:8:271:0:0:0,-2.40824,-10 0/0:35.5055:8:8:299:0:0:0,-2.40824,-10 0/0:92.7011:27:27:953:0:0:0,-8.12781,-10 0/0:38.5158:9:9:321:0:0:0,-2.70927,-10 0/0:44.5364:11:11:416:0:0:0,-3.31133,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:50.557:13:13:480:0:0:0,-3.91339,-10 0/0:59.5879:16:16:577:0:0:0,-4.81648,-10 0/0:71.6291:20:20:730:0:0:0,-6.0206,-10 0/0:50.557:13:13:462:0:0:0,-3.91339,-10 0/0:44.5364:11:11:416:0:0:0,-3.31133,-10 0/0:47.5467:12:12:448:0:0:0,-3.61236,-10 0/0:32.4952:7:7:266:0:0:0,-2.10721,-10 0/0:38.5158:9:9:333:0:0:0,-2.70927,-10 0/0:50.557:13:13:469:0:0:0,-3.91339,-10 0/0:86.6806:25:25:925:0:0:0,-7.52575,-10 0/0:41.5261:10:10:331:0:0:0,-3.0103,-10 0/0:56.5776:15:15:546:0:0:0,-4.51545,-10 0/0:38.5158:9:9:298:0:0:0,-2.70927,-10 0/0:14.4334:1:1:38:0:0:0,-0.30103,-3.8 0/0:53.5673:14:14:498:0:0:0,-4.21442,-10 0/0:29.4849:6:6:202:0:0:0,-1.80618,-10 0/0:23.4643:4:4:127:0:0:0,-1.20412,-10 0/0:38.5158:9:9:292:0:0:0,-2.70927,-10 0/0:35.5055:8:8:288:0:0:0,-2.40824,-10 0/0:35.5055:8:8:289:0:0:0,-2.40824,-10 scaffold_56 229363 . T G 301.034 . AB=0.619048;ABP=5.59539;AC=2;AF=0.0108696;AN=184;AO=15;CIGAR=1X;DP=1422;DPB=1422;DPRA=0.801749;EPP=3.15506;EPPR=3.01184;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9908;NS=92;NUMALT=1;ODDS=9.78108;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=523;QR=51172;RO=1407;RPP=35.5824;RPPR=3023.63;RUN=1;SAF=7;SAP=3.15506;SAR=8;SRF=707;SRP=3.08592;SRR=700;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:51.5105:6:6:228:0:0:0,-1.80618,-10 0/0:60.5414:9:9:322:0:0:0,-2.70927,-10 0/1:99:12:3:114:9:342:-10,0,-9.37006 0/0:60.5414:9:9:325:0:0:0,-2.70927,-10 0/0:60.5414:9:9:317:0:0:0,-2.70927,-10 0/0:54.5208:7:7:221:0:0:0,-2.10721,-10 0/0:93.6545:20:20:727:0:0:0,-6.0206,-10 0/0:69.5723:12:12:456:0:0:0,-3.61236,-10 0/0:60.5414:9:9:339:0:0:0,-2.70927,-10 0/0:54.5208:7:7:239:0:0:0,-2.10721,-10 0/0:45.4899:4:4:152:0:0:0,-1.20412,-10 0/0:51.5105:6:6:226:0:0:0,-1.80618,-10 0/0:99:28:28:999:0:0:0,-8.42884,-10 0/0:52.6649:15:14:531:1:15:0,-1.83936,-10 0/0:99:22:22:775:0:0:0,-6.62266,-10 0/0:84.6238:17:17:630:0:0:0,-5.11751,-10 0/0:99:27:27:969:0:0:0,-8.12781,-10 0/0:54.5208:7:7:264:0:0:0,-2.10721,-10 0/0:99:27:27:1016:0:0:0,-8.12781,-10 0/0:99:25:25:903:0:0:0,-7.52575,-10 0/0:99:26:26:954:0:0:0,-7.82678,-10 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:57.5311:8:8:272:0:0:0,-2.40824,-10 0/0:87.634:18:18:672:0:0:0,-5.41854,-10 0/0:57.5311:8:8:302:0:0:0,-2.40824,-10 0/0:87.634:18:18:627:0:0:0,-5.41854,-10 0/0:54.5208:7:7:231:0:0:0,-2.10721,-10 0/0:72.5826:13:13:492:0:0:0,-3.91339,-10 0/0:69.5723:12:12:429:0:0:0,-3.61236,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:63.5517:10:10:331:0:0:0,-3.0103,-10 0/0:54.5208:7:7:247:0:0:0,-2.10721,-10 0/0:78.6031:15:15:546:0:0:0,-4.51545,-10 0/0:54.5208:7:7:241:0:0:0,-2.10721,-10 0/0:57.5311:8:8:304:0:0:0,-2.40824,-10 0/0:48.5002:5:5:190:0:0:0,-1.50515,-10 0/0:81.6135:16:16:588:0:0:0,-4.81648,-10 0/0:99:35:35:1233:0:0:0,-10,-10 0/0:66.562:11:11:391:0:0:0,-3.31133,-10 0/0:54.5208:7:7:266:0:0:0,-2.10721,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/0:69.5723:12:12:430:0:0:0,-3.61236,-10 0/0:66.562:11:11:389:0:0:0,-3.31133,-10 0/0:96.6647:21:21:734:0:0:0,-6.32163,-10 0/0:75.5929:14:14:531:0:0:0,-4.21442,-10 0/0:63.5517:10:10:357:0:0:0,-3.0103,-10 0/0:99:35:35:1239:0:0:0,-10,-10 0/0:87.634:18:18:646:0:0:0,-5.41854,-10 0/0:63.5517:10:10:380:0:0:0,-3.0103,-10 0/0:99:28:28:1044:0:0:0,-8.42884,-10 0/0:84.6238:17:17:645:0:0:0,-5.11751,-10 0/0:99:24:24:875:0:0:0,-7.22472,-10 0/0:60.5414:9:9:342:0:0:0,-2.70927,-10 0/0:42.4796:3:3:67:0:0:0,-0.90309,-6.25333 0/0:99:27:27:986:0:0:0,-8.12781,-10 0/0:51.5105:6:6:217:0:0:0,-1.80618,-10 0/0:75.5929:14:14:501:0:0:0,-4.21442,-10 0/0:54.5208:7:7:260:0:0:0,-2.10721,-10 0/0:81.6135:16:16:583:0:0:0,-4.81648,-10 0/0:51.5105:6:6:228:0:0:0,-1.80618,-10 0/0:78.6031:15:15:564:0:0:0,-4.51545,-10 0/0:72.5826:13:13:469:0:0:0,-3.91339,-10 0/0:99:35:35:1262:0:0:0,-10,-10 0/0:54.5208:7:7:265:0:0:0,-2.10721,-10 0/0:72.5826:13:13:470:0:0:0,-3.91339,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:66.562:11:11:404:0:0:0,-3.31133,-10 0/0:66.562:11:11:406:0:0:0,-3.31133,-10 0/0:90.6437:19:19:661:0:0:0,-5.71957,-10 0/0:57.5311:8:8:300:0:0:0,-2.40824,-10 0/0:84.6238:17:17:623:0:0:0,-5.11751,-10 0/0:99:30:30:1047:0:0:0,-9.0309,-10 0/0:99:24:24:872:0:0:0,-7.22472,-10 0/0:90.6437:19:19:718:0:0:0,-5.71957,-10 0/0:99:24:24:902:0:0:0,-7.22472,-10 0/0:87.634:18:18:642:0:0:0,-5.41854,-10 0/0:49.9542:14:13:467:1:15:0,-1.56829,-10 0/0:81.6135:16:16:556:0:0:0,-4.81648,-10 0/0:48.5002:5:5:178:0:0:0,-1.50515,-10 0/0:66.562:11:11:417:0:0:0,-3.31133,-10 0/0:99:37:37:1380:0:0:0,-10,-10 0/0:99:26:26:969:0:0:0,-7.82678,-10 0/0:99:24:24:862:0:0:0,-7.22472,-10 0/0:90.6437:19:19:709:0:0:0,-5.71957,-10 0/0:69.5723:12:12:429:0:0:0,-3.61236,-10 0/0:54.5208:7:7:258:0:0:0,-2.10721,-10 0/0:90.6437:19:19:698:0:0:0,-5.71957,-10 0/0:69.5723:12:12:431:0:0:0,-3.61236,-10 0/1:93.2743:9:5:166:4:151:-10,0,-10 0/0:69.5723:12:12:424:0:0:0,-3.61236,-10 0/0:87.634:18:18:664:0:0:0,-5.41854,-10 0/0:84.6238:17:17:631:0:0:0,-5.11751,-10 scaffold_56 248796 . C T 8623.87 . AB=0.4925;ABP=3.20573;AC=23;AF=0.125;AN=184;AO=306;CIGAR=1X;DP=2237;DPB=2237;DPRA=1.23756;EPP=3.71993;EPPR=3.17248;GTI=1;LEN=1;MEANALT=1.05263;MQM=59.7876;MQMR=59.9544;NS=92;NUMALT=1;ODDS=0.203096;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11266;QR=69601;RO=1928;RPP=658.823;RPPR=4051.79;RUN=1;SAF=149;SAP=3.46446;SAR=157;SRF=970;SRP=3.17248;SRR=958;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.2628:21:21:751:0:0:0,-6.32163,-10 0/0:58.2216:17:17:639:0:0:0,-5.11751,-10 0/0:97.3545:30:30:1105:0:0:0,-9.0309,-10 0/0:49.1907:14:14:505:0:0:0,-4.21442,-10 0/0:46.1804:13:13:477:0:0:0,-3.91339,-10 0/0:34.1392:9:9:329:0:0:0,-2.70927,-10 0/0:99:42:42:1513:0:0:0,-10,-10 0/0:61.2319:18:18:679:0:0:0,-5.41854,-10 0/0:58.2216:17:17:625:0:0:0,-5.11751,-10 0/1:2.48006:7:0:0:7:253:-10,-2.10721,0 0/0:25.1083:6:6:228:0:0:0,-1.80618,-10 0/0:22.098:5:5:166:0:0:0,-1.50515,-10 0/0:99:31:31:1132:0:0:0,-9.33193,-10 0/1:99:40:22:800:18:684:-10,0,-10 0/0:91.3333:28:28:1035:0:0:0,-8.42884,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:91.3333:28:28:995:0:0:0,-8.42884,-10 0/0:40.1598:11:11:389:0:0:0,-3.31133,-10 0/1:99:27:15:538:12:449:-10,0,-10 0/1:99:52:28:1009:24:848:-10,0,-10 0/0:67.2525:21:20:715:0:0:0,-6.0206,-10 0/0:99:44:44:1551:0:0:0,-10,-10 0/0:28.1186:7:7:262:0:0:0,-2.10721,-10 0/1:99:20:7:249:13:488:-10,0,-10 0/0:73.2731:22:22:805:0:0:0,-6.62266,-10 0/1:99:32:21:753:11:411:-10,0,-10 0/0:91.3333:28:28:991:0:0:0,-8.42884,-10 0/0:64.2422:19:19:668:0:0:0,-5.71957,-10 0/0:52.201:15:15:550:0:0:0,-4.51545,-10 0/0:99:44:44:1558:0:0:0,-10,-10 0/0:31.1289:8:8:242:0:0:0,-2.40824,-10 0/0:31.1289:8:8:273:0:0:0,-2.40824,-10 0/0:76.2834:23:23:833:0:0:0,-6.92369,-10 0/0:31.1289:8:8:298:0:0:0,-2.40824,-10 0/0:64.2422:19:19:677:0:0:0,-5.71957,-10 0/0:34.1392:9:9:338:0:0:0,-2.70927,-10 0/0:34.1392:9:9:309:0:0:0,-2.70927,-10 0/1:99:30:10:371:20:729:-10,0,-10 0/0:67.2525:20:20:699:0:0:0,-6.0206,-10 0/0:61.2319:18:18:649:0:0:0,-5.41854,-10 0/0:99:34:34:1221:0:0:0,-10,-10 0/0:85.3143:26:26:932:0:0:0,-7.82678,-10 1/1:70.3817:28:0:0:28:1057:-10,-8.42884,0 0/0:99:44:44:1575:0:0:0,-10,-10 1/1:73.392:29:0:0:29:1044:-10,-8.72987,0 0/0:76.2834:23:23:861:0:0:0,-6.92369,-10 0/0:99:66:66:2353:0:0:0,-10,-10 0/1:99:33:20:713:12:452:-10,0,-10 1/1:40.2787:18:0:0:18:675:-10,-5.41854,0 0/0:99:43:43:1578:0:0:0,-10,-10 0/0:34.1392:9:9:342:0:0:0,-2.70927,-10 0/0:99:73:73:2634:0:0:0,-10,-10 1/1:34.2581:16:0:0:16:608:-10,-4.81648,0 0/0:31.1289:8:8:300:0:0:0,-2.40824,-10 0/0:99:60:60:2208:0:0:0,-10,-10 0/0:82.304:25:25:940:0:0:0,-7.52575,-10 0/1:99:27:10:374:17:623:-10,0,-10 0/0:25.1083:6:6:227:0:0:0,-1.80618,-10 0/0:99:34:34:1214:0:0:0,-10,-10 0/0:52.201:15:15:533:0:0:0,-4.51545,-10 0/1:99:34:18:656:16:572:-10,0,-10 0/0:82.304:25:25:916:0:0:0,-7.52575,-10 0/1:99:39:21:768:18:655:-10,0,-10 0/1:99:26:11:380:15:543:-10,0,-10 1/1:37.2684:17:0:0:17:646:-10,-5.11751,0 0/0:99:31:31:1033:0:0:0,-9.33193,-10 0/0:76.2834:23:23:820:0:0:0,-6.92369,-10 0/0:46.1804:13:13:463:0:0:0,-3.91339,-10 0/0:99:50:50:1784:0:0:0,-10,-10 0/0:58.2216:17:17:601:0:0:0,-5.11751,-10 0/0:91.3333:28:28:1005:0:0:0,-8.42884,-10 0/0:99:32:31:1142:0:0:0,-9.33193,-10 0/0:82.304:25:25:927:0:0:0,-7.52575,-10 0/0:67.2525:20:20:727:0:0:0,-6.0206,-10 0/0:91.6945:37:36:1231:1:14:0,-8.16991,-10 0/0:67.2525:20:20:730:0:0:0,-6.0206,-10 0/0:58.2216:17:17:637:0:0:0,-5.11751,-10 0/0:40.1598:11:11:404:0:0:0,-3.31133,-10 0/0:25.1083:6:6:206:0:0:0,-1.80618,-10 0/0:40.1598:11:11:381:0:0:0,-3.31133,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/1:99:33:19:690:14:515:-10,0,-10 0/0:99:43:43:1598:0:0:0,-10,-10 0/0:76.2834:23:23:834:0:0:0,-6.92369,-10 0/0:99:46:46:1685:0:0:0,-10,-10 0/0:25.1083:6:6:223:0:0:0,-1.80618,-10 0/0:67.2525:20:20:702:0:0:0,-6.0206,-10 0/0:67.2525:20:20:683:0:0:0,-6.0206,-10 0/0:22.098:5:5:189:0:0:0,-1.50515,-10 0/0:70.2628:21:21:771:0:0:0,-6.32163,-10 0/0:64.2422:19:19:668:0:0:0,-5.71957,-10 0/0:49.1907:14:14:523:0:0:0,-4.21442,-10 scaffold_56 267443 . A G 323.575 . AB=0.464286;ABP=3.32051;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1575;DPB=1575;DPRA=1.64706;EPP=4.51363;EPPR=5.12613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9584;NS=92;NUMALT=1;ODDS=6.14379;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=489;QR=56783;RO=1561;RPP=31.2394;RPPR=3349.39;RUN=1;SAF=8;SAP=4.51363;SAR=5;SRF=805;SRP=6.35028;SRR=756;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.7868:9:9:338:0:0:0,-2.70927,-10 0/0:44.7662:7:7:235:0:0:0,-2.10721,-10 0/0:65.8383:14:14:528:0:0:0,-4.21442,-10 0/0:59.8177:12:12:419:0:0:0,-3.61236,-10 0/0:62.828:14:13:455:0:0:0,-3.91339,-10 0/0:41.7559:6:6:220:0:0:0,-1.80618,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:95.9412:24:24:853:0:0:0,-7.22472,-10 0/0:68.8486:15:15:560:0:0:0,-4.51545,-10 0/0:29.7147:2:2:76:0:0:0,-0.60206,-7.22 0/0:38.7456:5:5:190:0:0:0,-1.50515,-10 0/0:35.7353:4:4:148:0:0:0,-1.20412,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/0:92.9309:23:23:871:0:0:0,-6.92369,-10 0/0:71.8589:16:16:600:0:0:0,-4.81648,-10 0/0:80.8898:19:19:664:0:0:0,-5.71957,-10 0/0:68.8486:15:15:532:0:0:0,-4.51545,-10 0/0:35.7353:4:4:142:0:0:0,-1.20412,-10 0/0:74.8692:17:17:589:0:0:0,-5.11751,-10 0/0:99:29:29:1045:0:0:0,-8.72987,-10 0/0:80.8898:19:19:701:0:0:0,-5.71957,-10 0/0:99:32:32:1143:0:0:0,-9.63296,-10 0/0:50.7868:9:9:325:0:0:0,-2.70927,-10 0/0:71.8589:16:16:596:0:0:0,-4.81648,-10 0/0:80.8898:19:19:678:0:0:0,-5.71957,-10 0/0:86.9099:21:21:781:0:0:0,-6.32163,-10 0/0:77.8795:18:18:650:0:0:0,-5.41854,-10 0/0:71.8589:16:16:596:0:0:0,-4.81648,-10 0/0:77.8795:18:18:663:0:0:0,-5.41854,-10 0/0:92.9309:23:23:819:0:0:0,-6.92369,-10 0/0:32.725:3:3:114:0:0:0,-0.90309,-10 0/0:50.7868:9:9:340:0:0:0,-2.70927,-10 0/0:65.8383:14:14:520:0:0:0,-4.21442,-10 0/0:80.8898:19:19:718:0:0:0,-5.71957,-10 0/0:59.8177:12:12:449:0:0:0,-3.61236,-10 0/0:38.7456:5:5:181:0:0:0,-1.50515,-10 0/0:47.7765:8:8:290:0:0:0,-2.40824,-10 0/0:92.9309:23:23:854:0:0:0,-6.92369,-10 0/0:74.8692:17:17:635:0:0:0,-5.11751,-10 0/0:74.8692:17:17:630:0:0:0,-5.11751,-10 0/0:99:35:35:1235:0:0:0,-10,-10 0/0:83.9001:20:20:714:0:0:0,-6.0206,-10 0/0:80.8898:19:19:709:0:0:0,-5.71957,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:95.9412:24:24:888:0:0:0,-7.22472,-10 0/0:59.8177:12:12:452:0:0:0,-3.61236,-10 0/0:99:53:53:1943:0:0:0,-10,-10 0/0:83.9001:20:20:725:0:0:0,-6.0206,-10 0/0:50.7868:9:9:317:0:0:0,-2.70927,-10 0/0:99:35:35:1270:0:0:0,-10,-10 0/0:74.8692:17:17:609:0:0:0,-5.11751,-10 0/0:99:36:36:1345:0:0:0,-10,-10 0/0:59.8177:12:12:452:0:0:0,-3.61236,-10 0/0:47.7765:8:8:300:0:0:0,-2.40824,-10 0/0:99:29:29:1068:0:0:0,-8.72987,-10 0/0:59.8177:12:12:455:0:0:0,-3.61236,-10 0/0:71.8589:16:16:589:0:0:0,-4.81648,-10 0/0:35.7353:4:4:152:0:0:0,-1.20412,-10 0/0:59.8177:12:12:451:0:0:0,-3.61236,-10 0/0:59.8177:12:12:429:0:0:0,-3.61236,-10 0/0:99:26:26:933:0:0:0,-7.82678,-10 0/0:80.8898:19:19:713:0:0:0,-5.71957,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:62.828:13:13:461:0:0:0,-3.91339,-10 0/0:50.7868:9:9:322:0:0:0,-2.70927,-10 0/0:80.8898:19:19:673:0:0:0,-5.71957,-10 0/0:59.8177:12:12:428:0:0:0,-3.61236,-10 0/0:59.8177:12:12:450:0:0:0,-3.61236,-10 0/1:99:28:15:547:13:489:-10,0,-10 0/0:68.8486:15:15:533:0:0:0,-4.51545,-10 0/0:77.8795:18:18:637:0:0:0,-5.41854,-10 0/0:98.9514:25:25:893:0:0:0,-7.52575,-10 0/0:99:26:26:902:0:0:0,-7.82678,-10 0/0:59.8177:12:12:420:0:0:0,-3.61236,-10 0/0:99:36:36:1301:0:0:0,-10,-10 0/0:50.7868:9:9:334:0:0:0,-2.70927,-10 0/0:44.7662:7:7:264:0:0:0,-2.10721,-10 0/0:59.8177:12:12:390:0:0:0,-3.61236,-10 0/0:44.7662:7:7:260:0:0:0,-2.10721,-10 0/0:59.8177:12:12:451:0:0:0,-3.61236,-10 0/0:99:26:26:963:0:0:0,-7.82678,-10 0/0:99:27:27:942:0:0:0,-8.12781,-10 0/0:92.9309:23:23:775:0:0:0,-6.92369,-10 0/0:74.8692:17:17:621:0:0:0,-5.11751,-10 0/0:99:26:26:933:0:0:0,-7.82678,-10 0/0:26.7044:1:1:38:0:0:0,-0.30103,-3.8 0/0:53.7971:10:10:371:0:0:0,-3.0103,-10 0/0:56.8074:11:11:406:0:0:0,-3.31133,-10 0/0:50.7868:9:9:324:0:0:0,-2.70927,-10 0/0:47.7765:8:8:303:0:0:0,-2.40824,-10 0/0:74.8692:17:17:615:0:0:0,-5.11751,-10 0/0:68.8486:15:15:547:0:0:0,-4.51545,-10 scaffold_56 283466 . G A 1079.25 . AB=0.549296;ABP=4.50892;AC=2;AF=0.010989;AN=182;AO=40;CIGAR=1X;DP=2102;DPB=2102;DPRA=1.79169;EPP=3.0103;EPPR=3.35183;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9869;NS=91;NUMALT=1;ODDS=2.95239;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1511;QR=75934;RO=2060;RPP=89.8692;RPPR=4441.57;RUN=1;SAF=20;SAP=3.0103;SAR=20;SRF=1025;SRP=3.11571;SRR=1035;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.7301:17:17:594:0:0:0,-5.11751,-10 0/0:49.7095:15:15:560:0:0:0,-4.51545,-10 0/0:73.7919:23:23:802:0:0:0,-6.92369,-10 0/0:58.7404:18:18:652:0:0:0,-5.41854,-10 0/0:79.8125:25:25:892:0:0:0,-7.52575,-10 .:.:.:.:.:.:.:. 0/0:99:33:33:1246:0:0:0,-9.93399,-10 0/0:85.8327:27:27:996:0:0:0,-8.12781,-10 0/0:46.6992:14:14:501:0:0:0,-4.21442,-10 0/0:13.5859:3:3:114:0:0:0,-0.90309,-10 0/0:43.6889:13:13:469:0:0:0,-3.91339,-10 0/0:34.658:10:10:354:0:0:0,-3.0103,-10 0/0:91.8519:29:29:1089:0:0:0,-8.72987,-10 0/0:99:40:40:1487:0:0:0,-10,-10 0/0:79.8125:26:25:941:0:0:0,-7.52575,-10 0/0:76.8022:24:24:896:0:0:0,-7.22472,-10 0/0:61.7507:19:19:671:0:0:0,-5.71957,-10 0/0:25.6271:7:7:259:0:0:0,-2.10721,-10 0/0:99:37:37:1393:0:0:0,-10,-10 0/0:99:45:45:1649:0:0:0,-10,-10 0/0:58.7404:18:18:673:0:0:0,-5.41854,-10 0/0:99:37:37:1361:0:0:0,-10,-10 0/0:43.6889:13:13:472:0:0:0,-3.91339,-10 0/0:64.761:20:20:747:0:0:0,-6.0206,-10 0/0:99:40:40:1496:0:0:0,-10,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:58.7404:18:18:670:0:0:0,-5.41854,-10 0/0:46.6992:14:14:531:0:0:0,-4.21442,-10 0/0:79.8125:25:25:936:0:0:0,-7.52575,-10 0/0:99:43:43:1613:0:0:0,-10,-10 0/0:31.6477:9:9:338:0:0:0,-2.70927,-10 0/0:19.6065:5:5:188:0:0:0,-1.50515,-10 0/0:70.7816:22:22:819:0:0:0,-6.62266,-10 0/0:46.6992:14:14:523:0:0:0,-4.21442,-10 0/0:70.7816:22:22:833:0:0:0,-6.62266,-10 0/0:28.6374:8:8:297:0:0:0,-2.40824,-10 0/0:64.761:20:20:736:0:0:0,-6.0206,-10 0/0:99:33:33:1214:0:0:0,-9.93399,-10 0/0:94.8603:30:30:1086:0:0:0,-9.0309,-10 0/0:61.7507:19:19:696:0:0:0,-5.71957,-10 0/0:99:40:40:1509:0:0:0,-10,-10 0/0:67.7713:21:21:798:0:0:0,-6.32163,-10 0/0:76.8022:24:24:854:0:0:0,-7.22472,-10 0/1:99:37:16:607:21:793:-10,0,-10 0/0:99:35:35:1308:0:0:0,-10,-10 0/0:58.7404:18:18:658:0:0:0,-5.41854,-10 0/0:99:37:37:1380:0:0:0,-10,-10 0/0:99:43:43:1620:0:0:0,-10,-10 0/0:40.6786:12:12:456:0:0:0,-3.61236,-10 0/0:99:37:37:1330:0:0:0,-10,-10 0/0:55.7301:17:17:631:0:0:0,-5.11751,-10 0/0:99:52:52:1882:0:0:0,-10,-10 0/0:55.7301:17:17:638:0:0:0,-5.11751,-10 0/0:16.5962:4:4:151:0:0:0,-1.20412,-10 0/0:99:48:48:1705:0:0:0,-10,-10 0/0:82.8226:26:26:978:0:0:0,-7.82678,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:13.5859:4:3:114:0:0:0,-0.90309,-10 0/0:67.7713:21:21:782:0:0:0,-6.32163,-10 0/0:22.6168:6:6:221:0:0:0,-1.80618,-10 0/0:99:35:35:1326:0:0:0,-10,-10 0/0:79.8125:25:25:920:0:0:0,-7.52575,-10 0/0:99:43:43:1586:0:0:0,-10,-10 0/0:64.761:20:20:758:0:0:0,-6.0206,-10 0/0:37.6683:11:11:409:0:0:0,-3.31133,-10 0/0:99:37:37:1369:0:0:0,-10,-10 0/0:22.6168:6:6:206:0:0:0,-1.80618,-10 0/0:58.7404:18:18:565:0:0:0,-5.41854,-10 0/0:99:50:49:1794:1:38:0,-9.55253,-10 0/0:37.6683:11:11:379:0:0:0,-3.31133,-10 0/0:82.8226:26:26:955:0:0:0,-7.82678,-10 0/1:99:34:16:607:18:680:-10,0,-10 0/0:31.6477:9:9:338:0:0:0,-2.70927,-10 0/0:82.8226:26:26:960:0:0:0,-7.82678,-10 0/0:88.8425:28:28:995:0:0:0,-8.42884,-10 0/0:58.7404:18:18:675:0:0:0,-5.41854,-10 0/0:58.7404:18:18:662:0:0:0,-5.41854,-10 0/0:46.6992:14:14:531:0:0:0,-4.21442,-10 0/0:40.6786:12:12:430:0:0:0,-3.61236,-10 0/0:52.7198:16:16:606:0:0:0,-4.81648,-10 0/0:99:39:39:1444:0:0:0,-10,-10 0/0:67.7713:21:21:777:0:0:0,-6.32163,-10 0/0:99:32:32:1144:0:0:0,-9.63296,-10 0/0:85.8327:27:27:1018:0:0:0,-8.12781,-10 0/0:73.7919:23:23:844:0:0:0,-6.92369,-10 0/0:28.6374:8:8:281:0:0:0,-2.40824,-10 0/0:73.7919:23:23:839:0:0:0,-6.92369,-10 0/0:46.6992:14:14:528:0:0:0,-4.21442,-10 0/0:16.5962:4:4:152:0:0:0,-1.20412,-10 0/0:76.8022:24:24:881:0:0:0,-7.22472,-10 0/0:61.7507:19:19:712:0:0:0,-5.71957,-10 0/0:40.6786:12:12:425:0:0:0,-3.61236,-10 scaffold_56 295992 . G T 5436.67 . AB=0.53617;ABP=5.68075;AC=18;AF=0.0978261;AN=184;AO=196;CIGAR=1X;DP=1879;DPB=1879;DPRA=1.0796;EPP=5.84651;EPPR=3.05678;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9536;NS=92;NUMALT=1;ODDS=0.719256;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7237;QR=61803;RO=1682;RPP=419.977;RPPR=3577.67;RUN=1;SAF=89;SAP=6.59988;SAR=107;SRF=835;SRP=3.1962;SRR=847;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.013:14:14:514:0:0:0,-4.21442,-10 0/0:64.0542:18:18:679:0:0:0,-5.41854,-10 0/0:73.0851:21:21:797:0:0:0,-6.32163,-10 0/0:52.013:14:14:530:0:0:0,-4.21442,-10 0/0:49.0027:13:13:481:0:0:0,-3.91339,-10 0/0:45.9924:12:12:446:0:0:0,-3.61236,-10 0/0:99:30:30:1120:0:0:0,-9.0309,-10 0/1:99:31:14:509:17:610:-10,0,-10 0/0:55.0233:15:15:567:0:0:0,-4.51545,-10 0/0:27.9306:6:6:228:0:0:0,-1.80618,-10 0/1:0.0811004:5:0:0:5:190:-10,-1.50515,0 0/0:36.9615:9:9:342:0:0:0,-2.70927,-10 1/1:74.7829:32:0:0:32:1157:-10,-9.63296,0 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:76.0954:22:22:790:0:0:0,-6.62266,-10 0/0:76.0954:22:22:824:0:0:0,-6.62266,-10 0/0:49.0027:13:13:475:0:0:0,-3.91339,-10 0/1:99:19:8:297:11:415:-10,0,-10 0/0:99:34:34:1280:0:0:0,-10,-10 0/0:70.0748:20:20:730:0:0:0,-6.0206,-10 0/0:99:33:33:1220:0:0:0,-9.93399,-10 0/0:49.0027:13:13:467:0:0:0,-3.91339,-10 0/1:99:18:7:255:11:416:-10,0,-10 0/0:49.0027:13:13:484:0:0:0,-3.91339,-10 0/0:67.0645:19:19:719:0:0:0,-5.71957,-10 0/0:88.1361:26:26:919:0:0:0,-7.82678,-10 0/0:36.9615:9:9:341:0:0:0,-2.70927,-10 0/0:67.0645:19:19:708:0:0:0,-5.71957,-10 0/0:79.1057:23:23:846:0:0:0,-6.92369,-10 0/0:24.9203:5:5:167:0:0:0,-1.50515,-10 0/0:45.9924:12:12:422:0:0:0,-3.61236,-10 0/0:82.1159:24:24:848:0:0:0,-7.22472,-10 0/0:45.9924:13:12:416:0:0:0,-3.61236,-10 0/0:88.1361:26:26:954:0:0:0,-7.82678,-10 0/0:33.9512:8:8:299:0:0:0,-2.40824,-10 0/0:39.9718:10:10:377:0:0:0,-3.0103,-10 0/0:99:33:33:1241:0:0:0,-9.93399,-10 0/0:55.0233:15:15:555:0:0:0,-4.51545,-10 0/0:70.0748:20:20:733:0:0:0,-6.0206,-10 0/0:85.126:25:25:942:0:0:0,-7.52575,-10 0/0:73.0851:21:21:780:0:0:0,-6.32163,-10 0/0:58.0336:16:16:584:0:0:0,-4.81648,-10 0/0:85.126:25:25:930:0:0:0,-7.52575,-10 0/0:94.1575:28:28:1019:0:0:0,-8.42884,-10 0/0:88.1361:26:26:927:0:0:0,-7.82678,-10 0/0:99:40:40:1498:0:0:0,-10,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:58.0336:16:16:607:0:0:0,-4.81648,-10 0/0:99:40:40:1469:0:0:0,-10,-10 0/0:36.9615:9:9:342:0:0:0,-2.70927,-10 0/0:99:37:37:1327:0:0:0,-10,-10 0/1:0.333905:7:0:0:7:242:-10,-2.10721,0 0/0:24.9203:5:5:190:0:0:0,-1.50515,-10 0/0:99:61:61:2215:0:0:0,-10,-10 1/1:29.6284:17:0:0:17:628:-10,-5.11751,0 0/1:99:21:12:446:9:337:-10,0,-10 0/0:55.0233:15:15:565:0:0:0,-4.51545,-10 0/0:73.0851:21:21:788:0:0:0,-6.32163,-10 0/0:58.0336:16:16:604:0:0:0,-4.81648,-10 0/0:99:41:41:1462:0:0:0,-10,-10 1/1:14.5769:12:0:0:12:449:-10,-3.61236,0 0/1:99:36:15:554:21:779:-10,0,-10 0/0:45.9924:12:12:456:0:0:0,-3.61236,-10 0/0:36.9615:9:9:342:0:0:0,-2.70927,-10 0/0:99:30:30:1124:0:0:0,-9.0309,-10 0/0:45.9924:12:12:430:0:0:0,-3.61236,-10 0/0:45.9924:12:12:447:0:0:0,-3.61236,-10 0/1:99:39:21:771:18:668:-10,0,-10 1/1:5.54599:9:0:0:9:341:-10,-2.70927,0 0/0:58.0336:16:16:563:0:0:0,-4.81648,-10 0/0:99:35:35:1282:0:0:0,-10,-10 0/0:55.0233:15:15:541:0:0:0,-4.51545,-10 0/0:67.0645:19:19:713:0:0:0,-5.71957,-10 0/0:67.0645:19:19:712:0:0:0,-5.71957,-10 0/0:70.0748:20:20:745:0:0:0,-6.0206,-10 0/0:55.0233:15:15:556:0:0:0,-4.51545,-10 0/0:52.013:14:14:484:0:0:0,-4.21442,-10 0/0:24.9203:5:5:190:0:0:0,-1.50515,-10 0/0:30.9409:7:7:234:0:0:0,-2.10721,-10 0/0:99:37:37:1308:0:0:0,-10,-10 0/0:85.126:25:25:926:0:0:0,-7.52575,-10 0/0:85.126:25:25:919:0:0:0,-7.52575,-10 0/1:99:28:17:643:11:414:-10,0,-10 0/1:99:31:15:493:16:591:-10,0,-10 0/0:21.91:4:4:129:0:0:0,-1.20412,-10 0/0:88.1361:26:26:968:0:0:0,-7.82678,-10 0/0:52.013:14:14:493:0:0:0,-4.21442,-10 0/0:39.9718:10:10:368:0:0:0,-3.0103,-10 0/0:99:30:30:1116:0:0:0,-9.0309,-10 0/0:73.0851:21:21:769:0:0:0,-6.32163,-10 0/0:52.013:14:14:490:0:0:0,-4.21442,-10 scaffold_56 296015 . C G 1753.12 . AB=0.544;ABP=5.11229;AC=4;AF=0.0217391;AN=184;AO=68;CIGAR=2M1X;DP=1864;DPB=1864.67;DPRA=2.11335;EPP=3.0103;EPPR=5.36943;GTI=1;LEN=1;MEANALT=1.33333;MQM=59.9412;MQMR=59.9663;NS=92;NUMALT=1;ODDS=2.06561;PAIRED=0;PAIREDR=0;PAO=1;PQA=38;PQR=38;PRO=1;QA=2415;QR=64498;RO=1782;RPP=150.67;RPPR=3872.57;RUN=1;SAF=34;SAP=3.0103;SAR=34;SRF=869;SRP=5.36943;SRR=913;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:37.952:14:13:475:0:0:0,-3.91339,-10 0|0:53.0035:18:18:658:0:0:0,-5.41854,-10 0|0:62.0344:21:21:754:0:0:0,-6.32163,-10 0|0:37.952:13:13:487:0:0:0,-3.91339,-10 0|0:37.952:13:13:409:0:0:0,-3.91339,-10 0|0:34.9417:12:12:405:0:0:0,-3.61236,-10 0|0:86.1167:30:29:1009:0:0:0,-8.72987,-10 0|0:92.1369:31:31:1082:0:0:0,-9.33193,-10 0|0:43.9726:15:15:535:0:0:0,-4.51545,-10 0|0:16.8799:6:6:223:0:0:0,-1.80618,-10 0|1:0.360099:4:4:151:0:0:0,-1.20412,-10 0|0:25.9108:9:9:330:0:0:0,-2.70927,-10 0|0:95.1467:32:32:1170:0:0:0,-9.63296,-10 0|0:99:34:34:1256:0:0:0,-10,-10 0|0:99:36:36:1317:0:0:0,-10,-10 0|0:65.0447:22:22:808:0:0:0,-6.62266,-10 0|0:65.0447:22:22:775:0:0:0,-6.62266,-10 0|0:37.952:13:13:472:0:0:0,-3.91339,-10 0|0:53.0035:19:18:640:0:0:0,-5.41854,-10 0|0:99:34:34:1276:0:0:0,-10,-10 0|0:56.0138:19:19:650:0:0:0,-5.71957,-10 0|0:98.1496:33:33:1216:0:0:0,-9.93399,-10 0|0:37.952:13:13:450:0:0:0,-3.91339,-10 0|0:53.0035:18:18:675:0:0:0,-5.41854,-10 0|0:34.9417:12:12:452:0:0:0,-3.61236,-10 0|0:56.0138:19:19:702:0:0:0,-5.71957,-10 0|0:74.0756:26:25:882:0:0:0,-7.52575,-10 0|0:22.9005:9:8:290:0:0:0,-2.40824,-10 0|0:56.0138:19:19:706:0:0:0,-5.71957,-10 0|0:68.055:23:23:816:0:0:0,-6.92369,-10 0|0:13.8696:5:5:188:0:0:0,-1.50515,-10 0|0:34.9417:12:12:438:0:0:0,-3.61236,-10 0|0:71.0653:24:24:842:0:0:0,-7.22472,-10 0|0:37.952:13:13:458:0:0:0,-3.91339,-10 0|0:77.0859:26:26:962:0:0:0,-7.82678,-10 0|0:22.9005:8:8:301:0:0:0,-2.40824,-10 0|0:28.9211:10:10:355:0:0:0,-3.0103,-10 0|0:95.1467:33:32:1165:0:0:0,-9.63296,-10 0|0:40.9623:14:14:489:0:0:0,-4.21442,-10 0|0:59.0241:20:20:748:0:0:0,-6.0206,-10 0|0:74.0756:25:25:930:0:0:0,-7.52575,-10 0|0:59.0241:21:20:716:0:0:0,-6.0206,-10 0|0:46.9829:16:16:556:0:0:0,-4.81648,-10 0|0:71.0653:25:24:896:0:0:0,-7.22472,-10 0|0:83.1064:28:28:1019:0:0:0,-8.42884,-10 0|1:99:24:8:257:16:542:-10,0,-10 0|1:99:40:21:768:19:684:-10,0,-10 0|0:89.126:30:30:1062:0:0:0,-9.0309,-10 0|0:46.9829:16:16:595:0:0:0,-4.81648,-10 0|0:99:40:40:1433:0:0:0,-10,-10 0|0:25.9108:9:9:329:0:0:0,-2.70927,-10 0|0:99:37:37:1345:0:0:0,-10,-10 0|0:19.8902:7:7:257:0:0:0,-2.10721,-10 0|0:13.8696:5:5:188:0:0:0,-1.50515,-10 0|1:99:61:27:988:33:1189:-10,0,-10 0|0:49.9932:17:17:629:0:0:0,-5.11751,-10 0|0:62.0344:21:21:785:0:0:0,-6.32163,-10 0|0:43.9726:15:15:531:0:0:0,-4.51545,-10 0|0:59.0241:21:20:742:0:0:0,-6.0206,-10 0|0:46.9829:16:16:597:0:0:0,-4.81648,-10 0|0:99:40:40:1431:0:0:0,-10,-10 0|0:34.9417:12:12:437:0:0:0,-3.61236,-10 0|0:99:36:36:1311:0:0:0,-10,-10 0|0:34.9417:12:12:446:0:0:0,-3.61236,-10 0|0:25.9108:9:9:336:0:0:0,-2.70927,-10 0|0:89.126:30:30:1108:0:0:0,-9.0309,-10 0|0:34.9417:12:12:416:0:0:0,-3.61236,-10 0|0:34.9417:12:12:434:0:0:0,-3.61236,-10 0|0:99:39:39:1391:0:0:0,-10,-10 0|0:25.9108:9:9:332:0:0:0,-2.70927,-10 0|0:43.9726:15:15:498:0:0:0,-4.51545,-10 0|0:98.1496:33:33:1207:0:0:0,-9.93399,-10 0|0:43.9726:15:15:529:0:0:0,-4.51545,-10 0|0:56.0138:19:19:700:0:0:0,-5.71957,-10 0|0:56.0138:19:19:714:0:0:0,-5.71957,-10 0|0:59.0241:20:20:721:0:0:0,-6.0206,-10 0|0:43.9726:15:15:563:0:0:0,-4.51545,-10 0|0:40.9623:14:14:492:0:0:0,-4.21442,-10 0|0:13.8696:5:5:187:0:0:0,-1.50515,-10 0|0:19.8902:7:7:241:0:0:0,-2.10721,-10 0|0:98.1496:37:33:1171:0:0:0,-9.93399,-10 0|0:74.0756:25:25:924:0:0:0,-7.52575,-10 0|0:74.0756:25:25:916:0:0:0,-7.52575,-10 0|0:83.1064:28:28:1042:0:0:0,-8.42884,-10 0|0:86.1167:29:29:1025:0:0:0,-8.72987,-10 0|0:10.8593:4:4:136:0:0:0,-1.20412,-10 0|0:77.0859:26:26:968:0:0:0,-7.82678,-10 0|0:40.9623:14:14:499:0:0:0,-4.21442,-10 0|0:28.9211:10:10:346:0:0:0,-3.0103,-10 0|0:89.126:30:30:1101:0:0:0,-9.0309,-10 0|0:62.0344:21:21:754:0:0:0,-6.32163,-10 0|0:40.9623:14:14:482:0:0:0,-4.21442,-10 scaffold_56 317224 . G A 53288.8 . AB=0.453488;ABP=6.24226;AC=174;AF=0.945652;AN=184;AO=1779;CIGAR=1X;DP=1908;DPB=1908;DPRA=1.05449;EPP=3.54859;EPPR=3.28604;GTI=2;LEN=1;MEANALT=1.03371;MQM=59.2872;MQMR=59.873;NS=92;NUMALT=1;ODDS=0.463131;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65269;QR=4646;RO=126;RPP=3866.06;RPPR=276.616;RUN=1;SAF=900;SAP=3.54859;SAR=879;SRF=65;SRP=3.28604;SRR=61;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:62.8185:17:0:0:17:627:-10,-5.11751,0 1/1:35.7258:8:0:0:8:304:-10,-2.40824,0 1/1:71.8494:20:0:0:20:756:-10,-6.0206,0 1/1:26.6949:5:0:0:5:173:-10,-1.50515,0 1/1:41.7464:10:0:0:10:377:-10,-3.0103,0 1/1:35.7258:8:0:0:8:299:-10,-2.40824,0 1/1:99:44:0:0:44:1623:-10,-10,0 1/1:62.8185:17:0:0:17:632:-10,-5.11751,0 1/1:59.8082:16:0:0:16:582:-10,-4.81648,0 1/1:20.6743:3:0:0:3:111:-10,-0.90309,0 1/1:23.6846:4:0:0:4:135:-10,-1.20412,0 1/1:14.6537:1:0:0:1:38:-3.8,-0.30103,0 0/1:99:35:19:719:16:608:-10,0,-10 1/1:99:34:0:0:34:1227:-10,-10,0 1/1:80.8801:23:0:0:23:818:-10,-6.92369,0 1/1:77.87:22:0:0:22:823:-10,-6.62266,0 1/1:99:33:0:0:33:1202:-10,-9.93399,0 0/1:1.92259:8:8:299:0:0:0,-2.40824,-10 1/1:65.8288:18:0:0:18:671:-10,-5.41854,0 1/1:99:41:0:0:40:1467:-10,-10,0 1/1:56.7979:15:0:0:15:527:-10,-4.51545,0 1/1:99:33:0:0:33:1221:-10,-9.93399,0 1/1:41.7464:10:0:0:10:357:-10,-3.0103,0 0/1:99:25:10:342:15:533:-10,0,-10 1/1:68.8391:19:0:0:19:698:-10,-5.71957,0 1/1:71.8494:20:0:0:20:731:-10,-6.0206,0 1/1:50.7773:13:0:0:13:473:-10,-3.91339,0 1/1:50.7773:13:0:0:13:452:-10,-3.91339,0 1/1:92.9211:27:0:0:27:993:-10,-8.12781,0 1/1:99:49:0:0:49:1828:-10,-10,0 1/1:32.7155:7:0:0:7:265:-10,-2.10721,0 1/1:29.7052:6:0:0:6:215:-10,-1.80618,0 1/1:56.7979:15:0:0:15:537:-10,-4.51545,0 1/1:47.767:12:0:0:12:454:-10,-3.61236,0 1/1:38.7361:9:0:0:9:338:-10,-2.70927,0 1/1:29.7052:6:0:0:6:228:-10,-1.80618,0 1/1:63.4822:26:1:16:25:912:-10,-4.81181,0 1/1:89.911:26:0:0:26:959:-10,-7.82678,0 1/1:71.8494:20:0:0:20:728:-10,-6.0206,0 1/1:71.8494:20:0:0:20:749:-10,-6.0206,0 1/1:99:39:0:0:39:1441:-10,-10,0 1/1:74.8597:21:0:0:21:794:-10,-6.32163,0 1/1:80.8801:23:0:0:23:844:-10,-6.92369,0 1/1:99:36:0:0:36:1326:-10,-10,0 1/1:68.8391:19:0:0:19:703:-10,-5.71957,0 1/1:74.8597:21:0:0:21:784:-10,-6.32163,0 1/1:99:51:0:0:51:1831:-10,-10,0 0/1:99:29:20:731:9:342:-10,0,-10 0/0:23.0595:20:20:744:0:0:0,-6.0206,-10 1/1:99:52:0:0:52:1822:-10,-10,0 1/1:44.7567:12:0:0:11:413:-10,-3.31133,0 1/1:99:46:0:0:46:1667:-10,-10,0 1/1:65.8288:18:0:0:18:639:-10,-5.41854,0 1/1:32.7155:7:0:0:7:266:-10,-2.10721,0 1/1:99:36:0:0:36:1326:-10,-10,0 1/1:50.7773:13:0:0:13:461:-10,-3.91339,0 0/1:99:29:17:628:12:455:-10,0,-10 1/1:29.7052:6:0:0:6:224:-10,-1.80618,0 1/1:59.8082:16:0:0:16:600:-10,-4.81648,0 1/1:62.8185:17:0:0:17:625:-10,-5.11751,0 0/1:99:37:18:678:19:686:-10,0,-10 1/1:80.8801:23:0:0:23:851:-10,-6.92369,0 1/1:99:39:0:0:39:1391:-10,-10,0 0/1:99:17:10:377:7:264:-10,0,-10 1/1:53.7876:14:0:0:14:532:-10,-4.21442,0 1/1:95.9271:28:0:0:28:1049:-10,-8.42884,0 1/1:44.7567:11:0:0:11:415:-10,-3.31133,0 1/1:50.7773:13:0:0:13:451:-10,-3.91339,0 1/1:99:44:0:0:44:1614:-10,-10,0 1/1:47.767:12:0:0:12:446:-10,-3.61236,0 1/1:89.911:26:0:0:26:943:-10,-7.82678,0 1/1:77.87:22:0:0:22:822:-10,-6.62266,0 1/1:99:32:0:0:31:1114:-10,-9.33193,0 1/1:56.7979:15:0:0:15:570:-10,-4.51545,0 1/1:99:31:0:0:31:1161:-10,-9.33193,0 1/1:56.7979:15:0:0:15:566:-10,-4.51545,0 1/1:59.8082:16:0:0:16:580:-10,-4.81648,0 1/1:50.7773:13:0:0:13:463:-10,-3.91339,0 1/1:29.7052:6:0:0:6:193:-10,-1.80618,0 1/1:65.8288:18:0:0:18:670:-10,-5.41854,0 1/1:99:31:0:0:31:1141:-10,-9.33193,0 1/1:99:35:0:0:35:1285:-10,-10,0 1/1:80.8801:23:0:0:23:839:-10,-6.92369,0 1/1:77.87:22:0:0:22:832:-10,-6.62266,0 1/1:83.8905:24:0:0:24:853:-10,-7.22472,0 0/1:0.0488187:3:3:112:0:0:0,-0.90309,-10 1/1:99:30:0:0:30:1112:-10,-9.0309,0 1/1:44.7567:11:0:0:11:411:-10,-3.31133,0 1/1:26.6949:5:0:0:5:187:-10,-1.50515,0 1/1:56.7979:15:0:0:15:558:-10,-4.51545,0 1/1:41.7464:10:0:0:10:372:-10,-3.0103,0 1/1:65.8288:18:0:0:18:664:-10,-5.41854,0 scaffold_56 319541 . A G 779.973 . AB=0.641509;ABP=12.2288;AC=2;AF=0.0108696;AN=184;AO=37;CIGAR=1X;DP=2289;DPB=2289;DPRA=0.861623;EPP=4.47751;EPPR=5.92843;GTI=2;LEN=1;MEANALT=1;MQM=46.1892;MQMR=59.2772;NS=92;NUMALT=1;ODDS=0.887343;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1285;QR=83082;RO=2251;RPP=83.3548;RPPR=4890.99;RUN=1;SAF=16;SAP=4.47751;SAR=21;SRF=1153;SRP=5.92843;SRR=1098;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.462:20:20:728:0:0:0,-6.0206,-10 0/0:69.4311:17:17:639:0:0:0,-5.11751,-10 0/0:84.4824:22:22:836:0:0:0,-6.62266,-10 0/0:69.4311:17:17:619:0:0:0,-5.11751,-10 0/0:78.462:20:20:751:0:0:0,-6.0206,-10 0/0:36.9554:22:21:754:1:38:0,-1.48024,-10 0/0:99:43:43:1629:0:0:0,-10,-10 0/0:99:41:41:1522:0:0:0,-10,-10 0/0:90.5032:24:24:910:0:0:0,-7.22472,-10 0/0:33.3076:5:5:177:0:0:0,-1.50515,-10 0/0:33.3076:5:5:190:0:0:0,-1.50515,-10 0/0:51.3694:11:11:415:0:0:0,-3.31133,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:99:50:50:1863:0:0:0,-10,-10 0/0:99:33:33:1225:0:0:0,-9.93399,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:96.5194:26:26:962:0:0:0,-7.82678,-10 0/0:63.4106:15:15:568:0:0:0,-4.51545,-10 0/0:81.4724:21:21:774:0:0:0,-6.32163,-10 0/0:99:43:43:1542:0:0:0,-10,-10 0/0:99:29:29:1089:0:0:0,-8.72987,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:51.3694:11:11:417:0:0:0,-3.31133,-10 0/0:90.5032:24:24:900:0:0:0,-7.22472,-10 0/0:69.4311:17:17:639:0:0:0,-5.11751,-10 0/1:99:32:19:718:13:439:-10,0,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:69.4311:17:17:619:0:0:0,-5.11751,-10 0/0:84.4824:22:22:831:0:0:0,-6.62266,-10 0/0:99:54:54:2030:0:0:0,-10,-10 0/0:39.3282:7:7:259:0:0:0,-2.10721,-10 0/0:48.3591:10:10:348:0:0:0,-3.0103,-10 0/0:99:30:30:1098:0:0:0,-9.0309,-10 0/0:33.3076:6:5:189:0:0:0,-1.50515,-10 0/0:96.5194:26:26:961:0:0:0,-7.82678,-10 0/0:42.3385:8:8:295:0:0:0,-2.40824,-10 0/0:69.4311:17:17:629:0:0:0,-5.11751,-10 0/0:99:38:38:1342:0:0:0,-10,-10 0/0:78.462:20:20:758:0:0:0,-6.0206,-10 0/0:93.5113:25:25:918:0:0:0,-7.52575,-10 0/0:99:41:41:1500:0:0:0,-10,-10 0/0:99:30:30:1110:0:0:0,-9.0309,-10 0/0:93.5113:25:25:930:0:0:0,-7.52575,-10 0/0:99:35:35:1309:0:0:0,-10,-10 0/1:1.45924:21:0:0:21:732:-10,-6.32163,0 0/0:75.4518:19:19:695:0:0:0,-5.71957,-10 0/0:99:56:56:2096:0:0:0,-10,-10 0/0:99:36:36:1317:0:0:0,-10,-10 0/0:57.39:13:13:484:0:0:0,-3.91339,-10 0/0:99:39:39:1434:0:0:0,-10,-10 0/0:63.4106:15:15:570:0:0:0,-4.51545,-10 0/0:99:52:52:1933:0:0:0,-10,-10 0/0:23.0237:17:16:582:1:38:0,-0.087061,-10 0/0:51.3694:11:11:415:0:0:0,-3.31133,-10 0/0:99:48:48:1730:0:0:0,-10,-10 0/0:0.0641416:16:15:533:1:38:-0.18764,0,-10 0/0:99:34:34:1220:0:0:0,-10,-10 0/0:51.3694:11:11:405:0:0:0,-3.31133,-10 0/0:72.4414:18:18:653:0:0:0,-5.41854,-10 0/0:60.4003:14:14:527:0:0:0,-4.21442,-10 0/0:99:39:39:1443:0:0:0,-10,-10 0/0:84.4824:22:22:833:0:0:0,-6.62266,-10 0/0:99:45:45:1662:0:0:0,-10,-10 0/0:81.4724:21:21:789:0:0:0,-6.32163,-10 0/0:57.39:13:13:481:0:0:0,-3.91339,-10 0/0:99:46:46:1692:0:0:0,-10,-10 0/0:81.4724:21:21:756:0:0:0,-6.32163,-10 0/0:51.3694:11:11:404:0:0:0,-3.31133,-10 0/0:99:48:48:1707:0:0:0,-10,-10 0/0:51.3694:11:11:418:0:0:0,-3.31133,-10 0/0:84.4824:22:22:811:0:0:0,-6.62266,-10 0/0:99:39:39:1416:0:0:0,-10,-10 0/0:96.5194:26:26:935:0:0:0,-7.82678,-10 0/0:84.4824:22:22:826:0:0:0,-6.62266,-10 0/0:99:31:31:1158:0:0:0,-9.33193,-10 0/0:57.39:13:13:488:0:0:0,-3.91339,-10 0/0:72.4414:18:18:667:0:0:0,-5.41854,-10 0/0:78.462:20:20:715:0:0:0,-6.0206,-10 0/0:54.3797:12:12:432:0:0:0,-3.61236,-10 0/0:75.4518:19:19:709:0:0:0,-5.71957,-10 0/0:99:38:38:1371:0:0:0,-10,-10 0/0:90.5032:24:24:908:0:0:0,-7.22472,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:99:27:27:963:0:0:0,-8.12781,-10 0/0:84.4824:22:22:805:0:0:0,-6.62266,-10 0/0:51.3694:11:11:416:0:0:0,-3.31133,-10 0/0:87.4929:23:23:835:0:0:0,-6.92369,-10 0/0:66.4208:16:16:603:0:0:0,-4.81648,-10 0/0:45.3488:9:9:342:0:0:0,-2.70927,-10 0/0:99:28:28:1049:0:0:0,-8.42884,-10 0/0:99:39:39:1435:0:0:0,-10,-10 0/0:72.4414:18:18:681:0:0:0,-5.41854,-10 scaffold_56 370133 . AC A 1264.86 . AB=0.504673;ABP=3.03059;AC=5;AF=0.0271739;AN=184;AO=56;CIGAR=1M1D6M;DP=1441;DPB=1435.62;DPRA=1.37944;EPP=5.49198;EPPR=7.65254;GTI=1;LEN=1;MEANALT=1.14286;MQM=60;MQMR=59.9978;NS=92;NUMALT=1;ODDS=2.62386;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=11.5;PQR=44.5;PRO=1.5;QA=1883;QR=48660;RO=1364;RPP=116.082;RPPR=2710.05;RUN=1;SAF=25;SAP=4.40625;SAR=31;SRF=677;SRP=3.1695;SRR=687;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:34.0259:8:8:282:0:0:0,-2.40824,-10 0|0:24.995:5:5:172:0:0:0,-1.50515,-10 0|0:52.0877:14:14:500:0:0:0,-4.21442,-10 0|0:34.0259:8:8:298:0:0:0,-2.40824,-10 0|0:40.0465:11:10:365:0:0:0,-3.0103,-10 0|0:21.9847:4:4:148:0:0:0,-1.20412,-10 0|0:52.3409:30:29:1034:1:38:0,-3.75378,-10 0|0:55.098:16:15:536:0:0:0,-4.51545,-10 0|0:28.0053:6:6:219:0:0:0,-1.80618,-10 0|0:18.9744:3:3:103:0:0:0,-0.90309,-9.61333 0|0:21.9847:4:4:149:0:0:0,-1.20412,-10 0|0:18.9744:3:3:104:0:0:0,-0.90309,-9.70667 0|0:70.1495:20:20:706:0:0:0,-6.0206,-10 0|0:70.1495:21:20:713:0:0:0,-6.0206,-10 0|0:67.1392:19:19:655:0:0:0,-5.71957,-10 0|0:64.1289:18:18:655:0:0:0,-5.41854,-10 0|0:61.1186:18:17:589:0:0:0,-5.11751,-10 0|0:24.995:5:5:171:0:0:0,-1.50515,-10 0|0:58.1083:16:16:568:0:0:0,-4.81648,-10 0|0:79.1804:24:23:819:0:0:0,-6.92369,-10 0|0:46.0671:12:12:433:0:0:0,-3.61236,-10 0|0:82.1907:24:24:872:0:0:0,-7.22472,-10 0|0:43.0568:11:11:390:0:0:0,-3.31133,-10 0|0:76.1701:22:22:767:0:0:0,-6.62266,-10 0|0:58.1083:16:16:558:0:0:0,-4.81648,-10 0|0:67.1392:19:19:680:0:0:0,-5.71957,-10 0|0:73.1598:21:21:752:0:0:0,-6.32163,-10 0|0:37.0362:9:9:326:0:0:0,-2.70927,-10 0|0:55.098:15:15:502:0:0:0,-4.51545,-10 0|0:99:37:37:1307:0:0:0,-10,-10 0|0:21.9847:4:4:148:0:0:0,-1.20412,-10 0|0:40.0465:10:10:351:0:0:0,-3.0103,-10 0|0:55.098:16:15:550:0:0:0,-4.51545,-10 0|0:46.0671:12:12:419:0:0:0,-3.61236,-10 0|0:52.0877:14:14:517:0:0:0,-4.21442,-10 0|0:34.0259:8:8:296:0:0:0,-2.40824,-10 0|0:31.0156:7:7:264:0:0:0,-2.10721,-10 0|0:76.1701:23:22:772:0:0:0,-6.62266,-10 0|0:46.0671:12:12:410:0:0:0,-3.61236,-10 0|0:79.1804:24:23:860:0:0:0,-6.92369,-10 0|0:85.201:25:25:885:0:0:0,-7.52575,-10 0|0:73.1598:21:21:776:0:0:0,-6.32163,-10 0|0:76.1701:22:22:762:0:0:0,-6.62266,-10 0|0:79.1804:23:23:816:0:0:0,-6.92369,-10 0|0:85.201:26:25:872:0:0:0,-7.52575,-10 0|1:99:12:5:167:7:255:-10,0,-10 0|1:99:39:21:762:18:619:-10,0,-10 0|0:70.1495:22:20:697:0:0:0,-6.0206,-10 0|0:34.0259:8:8:294:0:0:0,-2.40824,-10 0|0:40.0465:11:10:363:0:0:0,-3.0103,-10 0|0:40.0465:10:10:353:0:0:0,-3.0103,-10 0|0:99:32:32:1162:0:0:0,-9.63296,-10 0|0:58.1083:16:16:572:0:0:0,-4.81648,-10 0|0:28.0053:6:6:206:0:0:0,-1.80618,-10 0|1:99:37:23:816:13:394:-10,0,-10 0|0:40.0465:11:10:360:0:0:0,-3.0103,-10 0|0:58.1083:16:16:581:0:0:0,-4.81648,-10 0|0:24.995:5:5:179:0:0:0,-1.50515,-10 0|0:37.0362:10:9:324:0:0:0,-2.70927,-10 0|0:49.0774:13:13:440:0:0:0,-3.91339,-10 0|0:52.0877:14:14:511:0:0:0,-4.21442,-10 0|0:43.0568:11:11:368:0:0:0,-3.31133,-10 0|0:99:30:30:1037:0:0:0,-9.0309,-10 0|0:52.0877:14:14:493:0:0:0,-4.21442,-10 0|0:43.0568:11:11:406:0:0:0,-3.31133,-10 0|0:82.1907:24:24:869:0:0:0,-7.22472,-10 0|0:70.1495:21:20:696:0:0:0,-6.0206,-10 0|0:40.0465:10:10:366:0:0:0,-3.0103,-10 0|0:97.2413:30:29:1062:0:0:0,-8.72987,-10 0|0:34.0259:8:8:292:0:0:0,-2.40824,-10 0|0:43.0568:11:11:387:0:0:0,-3.31133,-10 0|0:88.2112:26:26:939:0:0:0,-7.82678,-10 0|0:58.1083:16:16:587:0:0:0,-4.81648,-10 0|0:55.098:15:15:549:0:0:0,-4.51545,-10 0|0:91.2214:27:27:955:0:0:0,-8.12781,-10 0|0:40.0465:10:10:370:0:0:0,-3.0103,-10 0|0:61.1186:18:17:606:0:0:0,-5.11751,-10 0|0:24.995:5:5:177:0:0:0,-1.50515,-10 0|0:17.7225:10:9:320:1:15:0,-0.5103,-10 0|0:46.0671:13:12:428:0:0:0,-3.61236,-10 0|0:99:36:36:1256:0:0:0,-10,-10 0|0:73.1598:21:21:749:0:0:0,-6.32163,-10 0|0:49.0774:13:13:474:0:0:0,-3.91339,-10 0|0:85.201:26:25:896:0:0:0,-7.52575,-10 0|0:76.1701:22:22:789:0:0:0,-6.62266,-10 0|0:18.9744:3:3:113:0:0:0,-0.90309,-10 0|0:61.1186:17:17:606:0:0:0,-5.11751,-10 0|0:31.0156:7:7:244:0:0:0,-2.10721,-10 0|0:28.0053:6:6:223:0:0:0,-1.80618,-10 0|1:91.0101:7:3:112:4:129:-10,0,-9.89019 0|0:46.0671:13:12:433:0:0:0,-3.61236,-10 0|1:0.273826:12:0:0:12:433:-10,-3.61236,0 scaffold_56 370151 . C T 175.161 . AB=0.380952;ABP=5.59539;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1438;DPB=1438;DPRA=1.34862;EPP=4.09604;EPPR=3.50368;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9495;NS=92;NUMALT=1;ODDS=10.2561;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=300;QR=51991;RO=1426;RPP=20.3821;RPPR=3064.88;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=700;SRP=4.03969;SRR=726;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.5941:8:8:290:0:0:0,-2.40824,-10 0/0:50.5632:5:5:187:0:0:0,-1.50515,-10 0/0:77.6559:14:14:520:0:0:0,-4.21442,-10 0/0:59.5941:8:8:300:0:0:0,-2.40824,-10 0/0:68.625:11:11:391:0:0:0,-3.31133,-10 0/0:47.5529:4:4:151:0:0:0,-1.20412,-10 0/0:99:30:30:1134:0:0:0,-9.0309,-10 0/0:83.6765:16:16:604:0:0:0,-4.81648,-10 0/0:53.5735:6:6:227:0:0:0,-1.80618,-10 0/0:44.5426:3:3:112:0:0:0,-0.90309,-10 0/0:47.5529:4:4:147:0:0:0,-1.20412,-10 0/0:44.5426:3:3:96:0:0:0,-0.90309,-8.96 0/0:95.717:20:20:734:0:0:0,-6.0206,-10 0/0:98.7266:21:21:763:0:0:0,-6.32163,-10 0/0:92.7071:19:19:651:0:0:0,-5.71957,-10 0/0:89.6969:18:18:679:0:0:0,-5.41854,-10 0/0:89.6969:18:18:662:0:0:0,-5.41854,-10 0/0:50.5632:5:5:182:0:0:0,-1.50515,-10 0/0:83.6765:16:16:556:0:0:0,-4.81648,-10 0/0:99:24:24:851:0:0:0,-7.22472,-10 0/0:71.6353:12:12:417:0:0:0,-3.61236,-10 0/0:99:24:24:904:0:0:0,-7.22472,-10 0/0:68.625:11:11:411:0:0:0,-3.31133,-10 0/0:98.7266:21:21:762:0:0:0,-6.32163,-10 0/0:83.6765:16:16:577:0:0:0,-4.81648,-10 0/0:92.7071:19:19:706:0:0:0,-5.71957,-10 0/0:98.7266:21:21:790:0:0:0,-6.32163,-10 0/0:62.6044:9:9:292:0:0:0,-2.70927,-10 0/0:80.6662:15:15:555:0:0:0,-4.51545,-10 0/0:99:37:37:1307:0:0:0,-10,-10 0/0:47.5529:4:4:150:0:0:0,-1.20412,-10 0/0:65.6147:10:10:325:0:0:0,-3.0103,-10 0/0:83.6765:16:16:573:0:0:0,-4.81648,-10 0/0:71.6353:12:12:433:0:0:0,-3.61236,-10 0/0:77.6559:14:14:526:0:0:0,-4.21442,-10 0/0:59.5941:8:8:303:0:0:0,-2.40824,-10 0/0:56.5838:7:7:266:0:0:0,-2.10721,-10 0/0:99:22:22:777:0:0:0,-6.62266,-10 0/0:71.6353:12:12:451:0:0:0,-3.61236,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:99:25:24:872:0:0:0,-7.22472,-10 0/0:98.7266:21:21:767:0:0:0,-6.32163,-10 0/0:99:22:22:810:0:0:0,-6.62266,-10 0/0:99:23:23:830:0:0:0,-6.92369,-10 0/0:99:26:25:906:0:0:0,-7.52575,-10 0/0:71.6353:12:12:454:0:0:0,-3.61236,-10 0/0:99:39:39:1441:0:0:0,-10,-10 0/0:99:22:22:781:0:0:0,-6.62266,-10 0/0:59.5941:8:8:301:0:0:0,-2.40824,-10 0/0:68.625:11:11:415:0:0:0,-3.31133,-10 0/0:65.6147:10:10:363:0:0:0,-3.0103,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:83.6765:16:16:598:0:0:0,-4.81648,-10 0/0:53.5735:6:6:226:0:0:0,-1.80618,-10 0/0:99:37:37:1358:0:0:0,-10,-10 0/0:65.6147:11:10:370:0:0:0,-3.0103,-10 0/0:83.6765:16:16:594:0:0:0,-4.81648,-10 0/0:50.5632:5:5:170:0:0:0,-1.50515,-10 0/0:65.6147:10:10:372:0:0:0,-3.0103,-10 0/0:74.6456:13:13:440:0:0:0,-3.91339,-10 0/0:77.6559:14:14:523:0:0:0,-4.21442,-10 0/0:68.625:11:11:366:0:0:0,-3.31133,-10 0/0:99:29:29:1033:0:0:0,-8.72987,-10 0/0:77.6559:14:14:501:0:0:0,-4.21442,-10 0/0:68.625:11:11:409:0:0:0,-3.31133,-10 0/0:99:24:23:872:0:0:0,-6.92369,-10 0/1:99:21:13:448:8:300:-10,0,-10 0/0:65.6147:10:10:376:0:0:0,-3.0103,-10 0/0:99:30:30:1081:0:0:0,-9.0309,-10 0/0:59.5941:8:8:301:0:0:0,-2.40824,-10 0/0:68.625:11:11:399:0:0:0,-3.31133,-10 0/0:99:26:26:942:0:0:0,-7.82678,-10 0/0:83.6765:16:16:593:0:0:0,-4.81648,-10 0/0:80.6662:15:15:567:0:0:0,-4.51545,-10 0/0:99:27:27:954:0:0:0,-8.12781,-10 0/0:65.6147:10:10:370:0:0:0,-3.0103,-10 0/0:89.6969:18:18:664:0:0:0,-5.41854,-10 0/0:50.5632:5:5:184:0:0:0,-1.50515,-10 0/0:65.6147:10:10:377:0:0:0,-3.0103,-10 0/0:74.6456:13:13:490:0:0:0,-3.91339,-10 0/0:99:36:36:1205:0:0:0,-10,-10 0/0:98.7266:21:21:784:0:0:0,-6.32163,-10 0/0:74.6456:13:13:485:0:0:0,-3.91339,-10 0/0:99:26:26:936:0:0:0,-7.82678,-10 0/0:99:22:22:794:0:0:0,-6.62266,-10 0/0:44.5426:3:3:114:0:0:0,-0.90309,-10 0/0:86.6867:17:17:642:0:0:0,-5.11751,-10 0/0:56.5838:7:7:251:0:0:0,-2.10721,-10 0/0:53.5735:6:6:219:0:0:0,-1.80618,-10 0/0:56.5838:7:7:266:0:0:0,-2.10721,-10 0/0:74.6456:13:13:490:0:0:0,-3.91339,-10 0/0:71.6353:12:12:454:0:0:0,-3.61236,-10 scaffold_56 370153 . C T 209.943 . AB=0.692308;ABP=7.18621;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=1437;DPB=1437;DPRA=1.18929;EPP=3.87889;EPPR=3.88742;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9495;NS=92;NUMALT=1;ODDS=9.56295;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=357;QR=51729;RO=1426;RPP=24.725;RPPR=3082.18;RUN=1;SAF=6;SAP=3.87889;SAR=4;SRF=699;SRP=4.20415;SRR=727;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.5849:8:8:293:0:0:0,-2.40824,-10 0/0:44.5437:4:4:151:0:0:0,-1.20412,-10 0/0:74.6467:14:14:501:0:0:0,-4.21442,-10 0/0:56.5849:8:8:276:0:0:0,-2.40824,-10 0/0:65.6158:11:11:389:0:0:0,-3.31133,-10 0/0:44.5437:4:4:152:0:0:0,-1.20412,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/0:80.6672:16:16:593:0:0:0,-4.81648,-10 0/0:50.5643:6:6:228:0:0:0,-1.80618,-10 0/0:41.5334:3:3:112:0:0:0,-0.90309,-10 0/0:44.5437:4:4:151:0:0:0,-1.20412,-10 0/0:41.5334:3:3:91:0:0:0,-0.90309,-8.49333 0/0:92.708:20:20:746:0:0:0,-6.0206,-10 0/0:95.7178:21:21:759:0:0:0,-6.32163,-10 0/0:89.6979:19:19:674:0:0:0,-5.71957,-10 0/0:86.6877:18:18:673:0:0:0,-5.41854,-10 0/0:86.6877:18:18:662:0:0:0,-5.41854,-10 0/0:47.554:5:5:187:0:0:0,-1.50515,-10 0/0:80.6672:16:16:576:0:0:0,-4.81648,-10 0/0:78.6078:24:23:853:1:15:0,-4.34451,-10 0/0:68.6261:12:12:418:0:0:0,-3.61236,-10 0/0:99:24:24:884:0:0:0,-7.22472,-10 0/0:65.6158:11:11:408:0:0:0,-3.31133,-10 0/0:98.7271:22:22:805:0:0:0,-6.62266,-10 0/0:80.6672:16:16:579:0:0:0,-4.81648,-10 0/0:86.6877:18:18:656:0:0:0,-5.41854,-10 0/0:95.7178:21:21:764:0:0:0,-6.32163,-10 0/0:59.5952:9:9:342:0:0:0,-2.70927,-10 0/0:77.6569:15:15:534:0:0:0,-4.51545,-10 0/0:99:37:37:1326:0:0:0,-10,-10 0/0:44.5437:4:4:141:0:0:0,-1.20412,-10 0/0:62.6055:10:10:348:0:0:0,-3.0103,-10 0/0:80.6672:16:16:566:0:0:0,-4.81648,-10 0/0:68.6261:12:12:432:0:0:0,-3.61236,-10 0/0:74.6467:14:14:518:0:0:0,-4.21442,-10 0/0:56.5849:8:8:281:0:0:0,-2.40824,-10 0/0:53.5746:7:7:264:0:0:0,-2.10721,-10 0/0:98.7271:22:22:733:0:0:0,-6.62266,-10 0/0:68.6261:12:12:446:0:0:0,-3.61236,-10 0/0:99:24:24:887:0:0:0,-7.22472,-10 0/0:99:25:25:900:0:0:0,-7.52575,-10 0/0:95.7178:21:21:760:0:0:0,-6.32163,-10 0/0:98.7271:22:22:802:0:0:0,-6.62266,-10 0/0:99:23:23:827:0:0:0,-6.92369,-10 0/0:99:26:26:921:0:0:0,-7.82678,-10 0/0:68.6261:12:12:444:0:0:0,-3.61236,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:98.7271:22:22:767:0:0:0,-6.62266,-10 0/0:56.5849:8:8:290:0:0:0,-2.40824,-10 0/0:65.6158:11:11:394:0:0:0,-3.31133,-10 0/0:62.6055:10:10:342:0:0:0,-3.0103,-10 0/0:99:32:32:1163:0:0:0,-9.63296,-10 0/0:80.6672:16:16:605:0:0:0,-4.81648,-10 0/0:50.5643:6:6:192:0:0:0,-1.80618,-10 0/0:99:37:37:1227:0:0:0,-10,-10 0/0:65.6158:11:11:401:0:0:0,-3.31133,-10 0/0:80.6672:16:16:569:0:0:0,-4.81648,-10 0/0:47.554:5:5:168:0:0:0,-1.50515,-10 0/0:62.6055:10:10:372:0:0:0,-3.0103,-10 0/0:71.6364:13:13:453:0:0:0,-3.91339,-10 0/0:74.6467:14:14:523:0:0:0,-4.21442,-10 0/0:65.6158:11:11:387:0:0:0,-3.31133,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:74.6467:14:14:514:0:0:0,-4.21442,-10 0/0:65.6158:11:11:412:0:0:0,-3.31133,-10 0/0:99:24:24:889:0:0:0,-7.22472,-10 0/0:92.708:21:20:694:0:0:0,-6.0206,-10 0/0:62.6055:10:10:371:0:0:0,-3.0103,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:56.5849:8:8:302:0:0:0,-2.40824,-10 0/0:65.6158:11:11:410:0:0:0,-3.31133,-10 0/0:99:26:26:975:0:0:0,-7.82678,-10 0/0:80.6672:16:16:605:0:0:0,-4.81648,-10 0/0:77.6569:15:15:557:0:0:0,-4.51545,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:62.6055:10:10:373:0:0:0,-3.0103,-10 0/0:86.6877:18:18:665:0:0:0,-5.41854,-10 0/0:47.554:5:5:190:0:0:0,-1.50515,-10 0/0:62.6055:10:10:363:0:0:0,-3.0103,-10 0/0:71.6364:13:13:460:0:0:0,-3.91339,-10 0/0:99:36:36:1249:0:0:0,-10,-10 0/0:95.7178:21:21:781:0:0:0,-6.32163,-10 0/0:71.6364:13:13:489:0:0:0,-3.91339,-10 0/0:99:26:26:928:0:0:0,-7.82678,-10 0/0:98.7271:22:22:802:0:0:0,-6.62266,-10 0/0:41.5334:3:3:113:0:0:0,-0.90309,-10 0/0:83.6775:17:17:634:0:0:0,-5.11751,-10 0/0:53.5746:7:7:259:0:0:0,-2.10721,-10 0/0:50.5643:6:6:228:0:0:0,-1.80618,-10 0/0:53.5746:7:7:261:0:0:0,-2.10721,-10 0/1:99:13:4:152:9:342:-10,0,-10 0/0:68.6261:12:12:453:0:0:0,-3.61236,-10 scaffold_56 404972 . AAGCCCTGG A 327.773 . AB=0.535714;ABP=3.32051;AC=1;AF=0.00543478;AN=184;AO=15;CIGAR=1M8D1M;DP=1467;DPB=1465.2;DPRA=1.77067;EPP=4.31318;EPPR=3.45069;GTI=0;LEN=8;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=5.39859;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=424;PRO=12;QA=509;QR=51376;RO=1425;RPP=35.5824;RPPR=2959.94;RUN=1;SAF=6;SAP=4.31318;SAR=9;SRF=720;SRP=3.35316;SRR=705;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:47.6395:11:11:382:0:0:0,-3.31133,-10 0|0:41.6189:9:9:322:0:0:0,-2.70927,-10 0|0:68.7116:19:18:667:0:0:0,-5.41854,-10 0|0:62.691:16:16:588:0:0:0,-4.81648,-10 0|0:50.6498:13:12:418:0:0:0,-3.61236,-10 0|0:26.5674:4:4:134:0:0:0,-1.20412,-10 0|0:71.7219:20:19:684:0:0:0,-5.71957,-10 0|0:71.7219:19:19:703:0:0:0,-5.71957,-10 0|0:47.6395:11:11:412:0:0:0,-3.31133,-10 0|0:29.5777:5:5:187:0:0:0,-1.50515,-10 0|0:23.5571:3:3:110:0:0:0,-0.90309,-10 0|0:26.5674:4:4:149:0:0:0,-1.20412,-10 0|0:92.7922:27:26:955:0:0:0,-7.82678,-10 0|0:99:32:32:1145:0:0:0,-9.63296,-10 0|0:77.7425:21:21:754:0:0:0,-6.32163,-10 0|0:62.691:16:16:579:0:0:0,-4.81648,-10 0|0:47.6395:13:11:402:0:0:0,-3.31133,-10 0|0:53.6601:13:13:477:0:0:0,-3.91339,-10 0|0:86.773:24:24:842:0:0:0,-7.22472,-10 0|0:80.7528:22:22:770:0:0:0,-6.62266,-10 0|0:71.7219:19:19:682:0:0:0,-5.71957,-10 0|0:99:29:29:1059:0:0:0,-8.72987,-10 0|0:35.5983:7:7:253:0:0:0,-2.10721,-10 0|0:41.6189:9:9:337:0:0:0,-2.70927,-10 0|0:56.6704:15:14:497:0:0:0,-4.21442,-10 0|0:95.8045:27:27:971:0:0:0,-8.12781,-10 0|0:59.6807:15:15:540:0:0:0,-4.51545,-10 0|0:32.588:6:6:222:0:0:0,-1.80618,-10 0|0:74.7322:20:20:714:0:0:0,-6.0206,-10 0|0:95.8045:27:27:943:0:0:0,-8.12781,-10 0|0:41.6189:9:9:299:0:0:0,-2.70927,-10 0|0:41.6189:9:9:339:0:0:0,-2.70927,-10 0|0:47.6395:11:11:409:0:0:0,-3.31133,-10 0|0:35.5983:7:7:258:0:0:0,-2.10721,-10 0|0:77.7425:21:21:764:0:0:0,-6.32163,-10 0|0:38.6086:8:8:287:0:0:0,-2.40824,-10 0|0:32.588:6:6:214:0:0:0,-1.80618,-10 0|0:86.773:24:24:863:0:0:0,-7.22472,-10 0|0:56.6704:15:14:506:0:0:0,-4.21442,-10 0|0:59.6807:15:15:542:0:0:0,-4.51545,-10 0|0:92.7922:27:26:949:0:0:0,-7.82678,-10 0|0:86.773:25:24:847:0:0:0,-7.22472,-10 0|0:50.6498:12:12:439:0:0:0,-3.61236,-10 0|0:99:35:35:1291:0:0:0,-10,-10 0|0:65.7013:17:17:609:0:0:0,-5.11751,-10 0|0:35.5983:8:7:233:0:0:0,-2.10721,-10 0|0:99:39:39:1385:0:0:0,-10,-10 0|0:99:29:29:1037:0:0:0,-8.72987,-10 0|0:35.5983:7:7:259:0:0:0,-2.10721,-10 0|0:99:37:36:1268:0:0:0,-10,-10 0|0:29.5777:5:5:187:0:0:0,-1.50515,-10 0|0:99:33:32:1173:0:0:0,-9.63296,-10 0|0:41.6189:9:9:330:0:0:0,-2.70927,-10 0|0:65.7013:17:17:596:0:0:0,-5.11751,-10 0|0:99:40:37:1343:0:0:0,-10,-10 0|0:26.5674:4:4:148:0:0:0,-1.20412,-10 0|0:44.6292:10:10:359:0:0:0,-3.0103,-10 0|0:29.5777:5:5:188:0:0:0,-1.50515,-10 0|0:53.6601:13:13:481:0:0:0,-3.91339,-10 0|0:47.6395:11:11:395:0:0:0,-3.31133,-10 0|0:98.815:29:28:1010:0:0:0,-8.42884,-10 0|0:53.6601:13:13:472:0:0:0,-3.91339,-10 0|0:99:31:31:1105:0:0:0,-9.33193,-10 0|0:50.6498:12:12:420:0:0:0,-3.61236,-10 0|0:44.6292:10:10:362:0:0:0,-3.0103,-10 0|0:65.7013:17:17:638:0:0:0,-5.11751,-10 0|0:47.6395:11:11:402:0:0:0,-3.31133,-10 0|0:38.6086:9:8:287:0:0:0,-2.40824,-10 0|0:95.8045:28:27:980:0:0:0,-8.12781,-10 0|0:38.6086:9:8:291:0:0:0,-2.40824,-10 0|0:83.7629:23:23:840:0:0:0,-6.92369,-10 0|1:99:28:13:485:15:509:-10,0,-10 0|0:74.7322:21:20:736:0:0:0,-6.0206,-10 0|0:47.6395:11:11:391:0:0:0,-3.31133,-10 0|0:65.7013:17:17:628:0:0:0,-5.11751,-10 0|0:32.588:6:6:201:0:0:0,-1.80618,-10 0|0:35.5983:7:7:259:0:0:0,-2.10721,-10 0|0:35.5983:7:7:256:0:0:0,-2.10721,-10 0|0:29.5777:5:5:145:0:0:0,-1.50515,-10 0|0:44.6292:11:10:369:0:0:0,-3.0103,-10 0|0:86.773:24:24:849:0:0:0,-7.22472,-10 0|0:77.7425:23:21:761:0:0:0,-6.32163,-10 0|0:77.7425:22:21:756:0:0:0,-6.32163,-10 0|0:53.6601:13:13:483:0:0:0,-3.91339,-10 0|0:71.7219:19:19:666:0:0:0,-5.71957,-10 0|0:29.5777:5:5:181:0:0:0,-1.50515,-10 0|0:74.7322:20:20:731:0:0:0,-6.0206,-10 0|0:26.5674:5:4:150:0:0:0,-1.20412,-10 0|0:26.5674:4:4:132:0:0:0,-1.20412,-10 0|0:71.7219:19:19:674:0:0:0,-5.71957,-10 0|0:53.6601:13:13:469:0:0:0,-3.91339,-10 0|0:44.6292:11:10:351:0:0:0,-3.0103,-10 scaffold_56 405000 . C T 298.176 . AB=0.583333;ABP=4.45795;AC=2;AF=0.0108696;AN=184;AO=14;CIGAR=1X;DP=1472;DPB=1472;DPRA=0.745856;EPP=5.49198;EPPR=4.09678;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9801;NS=92;NUMALT=1;ODDS=9.6511;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=503;QR=52456;RO=1457;RPP=33.4109;RPPR=3029.4;RUN=1;SAF=9;SAP=5.49198;SAR=5;SRF=726;SRP=3.04756;SRR=731;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.998:11:11:411:0:0:0,-3.31133,-10 0/0:59.9774:9:9:323:0:0:0,-2.70927,-10 0/0:90.0804:19:19:690:0:0:0,-5.71957,-10 0/0:81.0494:16:16:598:0:0:0,-4.81648,-10 0/0:72.0186:13:13:476:0:0:0,-3.91339,-10 0/0:44.9259:4:4:128:0:0:0,-1.20412,-10 0/0:93.0898:20:20:726:0:0:0,-6.0206,-10 0/1:99:19:10:380:9:339:-10,0,-10 0/0:65.998:11:11:413:0:0:0,-3.31133,-10 0/0:47.9362:5:5:189:0:0:0,-1.50515,-10 0/0:41.9156:3:3:114:0:0:0,-0.90309,-10 0/0:44.9259:4:4:152:0:0:0,-1.20412,-10 0/0:99:27:27:967:0:0:0,-8.12781,-10 0/0:99:34:34:1209:0:0:0,-10,-10 0/0:99:22:22:816:0:0:0,-6.62266,-10 0/0:81.0494:16:16:604:0:0:0,-4.81648,-10 0/0:75.0289:14:14:499:0:0:0,-4.21442,-10 0/0:72.0186:13:13:458:0:0:0,-3.91339,-10 0/0:99:24:24:819:0:0:0,-7.22472,-10 0/0:99:22:22:763:0:0:0,-6.62266,-10 0/0:90.0804:19:19:668:0:0:0,-5.71957,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:53.9568:7:7:233:0:0:0,-2.10721,-10 0/0:62.9877:10:10:377:0:0:0,-3.0103,-10 0/0:78.0392:15:15:516:0:0:0,-4.51545,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:81.0494:16:16:593:0:0:0,-4.81648,-10 0/0:50.9465:6:6:228:0:0:0,-1.80618,-10 0/0:93.0898:20:20:713:0:0:0,-6.0206,-10 0/0:99:27:27:945:0:0:0,-8.12781,-10 0/0:59.9774:9:9:321:0:0:0,-2.70927,-10 0/0:59.9774:9:9:337:0:0:0,-2.70927,-10 0/0:65.998:11:11:417:0:0:0,-3.31133,-10 0/0:53.9568:7:7:266:0:0:0,-2.10721,-10 0/0:96.1012:21:21:778:0:0:0,-6.32163,-10 0/0:56.9671:8:8:283:0:0:0,-2.40824,-10 0/0:50.9465:6:6:206:0:0:0,-1.80618,-10 0/0:99:24:24:842:0:0:0,-7.22472,-10 0/0:78.0392:15:15:485:0:0:0,-4.51545,-10 0/0:78.0392:15:15:528:0:0:0,-4.51545,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:99:25:25:892:0:0:0,-7.52575,-10 0/0:69.0083:12:12:449:0:0:0,-3.61236,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:84.0597:17:17:619:0:0:0,-5.11751,-10 0/0:56.9671:8:8:284:0:0:0,-2.40824,-10 0/0:99:39:39:1399:0:0:0,-10,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:53.9568:7:7:263:0:0:0,-2.10721,-10 0/0:99:37:37:1265:0:0:0,-10,-10 0/0:50.9465:6:6:228:0:0:0,-1.80618,-10 0/0:99:33:33:1187:0:0:0,-9.93399,-10 0/0:59.9774:9:9:330:0:0:0,-2.70927,-10 0/0:84.0597:17:17:617:0:0:0,-5.11751,-10 0/0:99:41:41:1458:0:0:0,-10,-10 0/0:44.9259:4:4:149:0:0:0,-1.20412,-10 0/0:62.9877:10:10:354:0:0:0,-3.0103,-10 0/0:47.9362:5:5:190:0:0:0,-1.50515,-10 0/0:72.0186:13:13:479:0:0:0,-3.91339,-10 0/0:65.998:11:11:371:0:0:0,-3.31133,-10 0/0:99:29:29:1035:0:0:0,-8.72987,-10 0/0:72.0186:13:13:473:0:0:0,-3.91339,-10 0/0:99:30:30:1048:0:0:0,-9.0309,-10 0/0:69.0083:12:12:413:0:0:0,-3.61236,-10 0/0:62.9877:10:10:377:0:0:0,-3.0103,-10 0/0:84.0597:17:17:630:0:0:0,-5.11751,-10 0/0:65.998:11:11:397:0:0:0,-3.31133,-10 0/0:59.9774:9:9:316:0:0:0,-2.70927,-10 0/0:99:28:28:996:0:0:0,-8.42884,-10 0/0:59.9774:9:9:310:0:0:0,-2.70927,-10 0/0:99:23:23:837:0:0:0,-6.92369,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:96.1012:21:21:786:0:0:0,-6.32163,-10 0/0:65.998:11:11:396:0:0:0,-3.31133,-10 0/0:84.0597:17:17:638:0:0:0,-5.11751,-10 0/0:50.9465:6:6:180:0:0:0,-1.80618,-10 0/0:56.9671:8:8:299:0:0:0,-2.40824,-10 0/0:53.9568:7:7:258:0:0:0,-2.10721,-10 0/0:47.9362:5:5:166:0:0:0,-1.50515,-10 0/0:65.998:11:11:414:0:0:0,-3.31133,-10 0/0:99:24:24:860:0:0:0,-7.22472,-10 0/0:99:23:22:757:0:0:0,-6.62266,-10 0/0:99:22:22:789:0:0:0,-6.62266,-10 0/0:69.0083:12:12:455:0:0:0,-3.61236,-10 0/0:90.0804:19:19:688:0:0:0,-5.71957,-10 0/1:6.51425e-07:5:0:0:5:164:-10,-1.50515,0 0/0:93.0898:20:20:746:0:0:0,-6.0206,-10 0/0:47.9362:5:5:162:0:0:0,-1.50515,-10 0/0:44.9259:4:4:127:0:0:0,-1.20412,-10 0/0:90.0804:19:19:658:0:0:0,-5.71957,-10 0/0:72.0186:13:13:478:0:0:0,-3.91339,-10 0/0:62.9877:10:10:368:0:0:0,-3.0103,-10 scaffold_56 405014 . T C 797.478 . AB=0.68;ABP=17.0814;AC=4;AF=0.0217391;AN=184;AO=36;CIGAR=1X;DP=1456;DPB=1456;DPRA=0.97799;EPP=3.25157;EPPR=3.45255;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9796;NS=92;NUMALT=1;ODDS=5.19926;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1247;QR=51332;RO=1419;RPP=81.1833;RPPR=3084.33;RUN=1;SAF=19;SAP=3.25157;SAR=17;SRF=701;SRP=3.45255;SRR=718;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.2547:11:11:370:0:0:0,-3.31133,-10 0/0:48.2341:9:9:324:0:0:0,-2.70927,-10 0/0:78.3371:19:19:711:0:0:0,-5.71957,-10 0/0:69.3062:16:16:597:0:0:0,-4.81648,-10 0/0:60.2753:13:13:414:0:0:0,-3.91339,-10 0/0:33.1826:4:4:129:0:0:0,-1.20412,-10 0/0:81.3474:20:20:745:0:0:0,-6.0206,-10 0/1:99:19:10:377:9:342:-10,0,-10 0/0:54.2547:11:11:417:0:0:0,-3.31133,-10 0/0:36.1929:5:5:190:0:0:0,-1.50515,-10 0/0:30.1723:3:3:113:0:0:0,-0.90309,-10 0/0:33.1826:4:4:152:0:0:0,-1.20412,-10 0/0:99:27:27:975:0:0:0,-8.12781,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:87.3678:22:22:787:0:0:0,-6.62266,-10 0/0:69.3062:16:16:574:0:0:0,-4.81648,-10 0/0:63.2856:14:14:489:0:0:0,-4.21442,-10 0/1:0.0237932:13:0:0:13:462:-10,-3.91339,0 0/0:67.315:24:23:822:1:15:0,-4.34451,-10 0/0:84.3576:21:21:766:0:0:0,-6.32163,-10 0/0:78.3371:19:19:650:0:0:0,-5.71957,-10 0/0:99:29:29:1079:0:0:0,-8.72987,-10 0/0:42.2135:7:7:242:0:0:0,-2.10721,-10 0/0:51.2444:10:10:377:0:0:0,-3.0103,-10 0/0:66.2959:15:15:534:0:0:0,-4.51545,-10 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:69.3062:16:16:598:0:0:0,-4.81648,-10 0/0:39.2032:6:6:219:0:0:0,-1.80618,-10 0/0:81.3474:20:20:697:0:0:0,-6.0206,-10 0/0:99:27:27:954:0:0:0,-8.12781,-10 0/0:48.2341:9:9:306:0:0:0,-2.70927,-10 0/0:48.2341:9:9:342:0:0:0,-2.70927,-10 0/0:51.2444:10:10:380:0:0:0,-3.0103,-10 0/0:42.2135:7:7:261:0:0:0,-2.10721,-10 0/0:84.3576:21:21:728:0:0:0,-6.32163,-10 0/0:45.2238:8:8:303:0:0:0,-2.40824,-10 0/0:39.2032:6:6:218:0:0:0,-1.80618,-10 0/0:93.3876:24:24:851:0:0:0,-7.22472,-10 0/0:66.2959:15:15:539:0:0:0,-4.51545,-10 0/0:66.2959:15:15:515:0:0:0,-4.51545,-10 0/0:99:27:27:969:0:0:0,-8.12781,-10 0/0:96.3968:25:25:881:0:0:0,-7.52575,-10 0/0:57.265:12:12:445:0:0:0,-3.61236,-10 0/0:99:35:35:1287:0:0:0,-10,-10 0/0:72.3165:17:17:609:0:0:0,-5.11751,-10 0/0:45.2238:8:8:259:0:0:0,-2.40824,-10 0/0:99:38:38:1393:0:0:0,-10,-10 0/0:99:27:27:972:0:0:0,-8.12781,-10 0/0:42.2135:7:7:264:0:0:0,-2.10721,-10 0/0:99:36:36:1315:0:0:0,-10,-10 0/0:39.2032:6:6:221:0:0:0,-1.80618,-10 0/0:99:33:33:1216:0:0:0,-9.93399,-10 0/0:48.2341:9:9:338:0:0:0,-2.70927,-10 0/0:72.3165:17:17:590:0:0:0,-5.11751,-10 0/0:99:39:39:1386:0:0:0,-10,-10 0/0:33.1826:4:4:150:0:0:0,-1.20412,-10 0/0:48.2341:9:9:341:0:0:0,-2.70927,-10 0/0:36.1929:5:5:190:0:0:0,-1.50515,-10 0/0:60.2753:13:13:470:0:0:0,-3.91339,-10 0/0:54.2547:11:11:375:0:0:0,-3.31133,-10 0/0:99:29:29:1035:0:0:0,-8.72987,-10 0/0:60.2753:13:13:463:0:0:0,-3.91339,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/0:57.265:12:12:417:0:0:0,-3.61236,-10 0/0:51.2444:10:10:353:0:0:0,-3.0103,-10 0/0:72.3165:17:17:644:0:0:0,-5.11751,-10 0/0:54.2547:11:11:397:0:0:0,-3.31133,-10 0/0:45.2238:8:8:291:0:0:0,-2.40824,-10 0/0:99:27:27:960:0:0:0,-8.12781,-10 0/0:48.2341:9:9:311:0:0:0,-2.70927,-10 0/0:90.3778:23:23:846:0:0:0,-6.92369,-10 0/0:99:27:27:976:0:0:0,-8.12781,-10 0/0:84.3576:21:21:783:0:0:0,-6.32163,-10 0/0:54.2547:11:11:412:0:0:0,-3.31133,-10 0/0:72.3165:17:17:622:0:0:0,-5.11751,-10 0/0:39.2032:6:6:204:0:0:0,-1.80618,-10 0/0:45.2238:8:8:304:0:0:0,-2.40824,-10 0/0:42.2135:7:7:262:0:0:0,-2.10721,-10 0/0:36.1929:5:5:178:0:0:0,-1.50515,-10 0/0:54.2547:11:11:410:0:0:0,-3.31133,-10 0/0:93.3876:24:24:859:0:0:0,-7.22472,-10 0/0:90.3778:23:23:850:0:0:0,-6.92369,-10 0/0:81.3474:21:20:720:0:0:0,-6.0206,-10 0/0:57.265:12:12:452:0:0:0,-3.61236,-10 0/0:78.3371:19:19:655:0:0:0,-5.71957,-10 0/1:9.26892e-05:5:0:0:5:172:-10,-1.50515,0 0/0:78.3371:19:19:674:0:0:0,-5.71957,-10 0/0:36.1929:5:5:190:0:0:0,-1.50515,-10 0/0:33.1826:4:4:128:0:0:0,-1.20412,-10 0/0:53.2781:19:18:669:1:15:0,-2.94082,-10 0/1:99:13:6:227:7:241:-10,0,-10 0/0:51.2444:10:10:380:0:0:0,-3.0103,-10 scaffold_56 464213 . A G 565.165 . AB=0.727273;ABP=17.8158;AC=2;AF=0.0108696;AN=184;AO=26;CIGAR=1X;DP=1556;DPB=1556;DPRA=0.989926;EPP=3.0103;EPPR=26.6747;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9398;NS=92;NUMALT=1;ODDS=3.72559;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=910;QR=54508;RO=1527;RPP=59.4686;RPPR=3318.85;RUN=1;SAF=13;SAP=3.0103;SAR=13;SRF=699;SRP=26.6747;SRR=828;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.2438:13:13:454:0:0:0,-3.91339,-10 0/0:32.1614:5:5:188:0:0:0,-1.50515,-10 0/0:68.285:17:17:602:0:0:0,-5.11751,-10 0/0:59.2541:14:14:521:0:0:0,-4.21442,-10 0/0:59.2541:14:14:527:0:0:0,-4.21442,-10 0/0:50.2232:11:11:387:0:0:0,-3.31133,-10 0/0:99:41:41:1474:0:0:0,-10,-10 0/0:71.2953:18:18:647:0:0:0,-5.41854,-10 0/0:53.2335:12:12:442:0:0:0,-3.61236,-10 0/0:35.1717:6:6:226:0:0:0,-1.80618,-10 0/0:38.182:7:7:246:0:0:0,-2.10721,-10 0/0:44.2026:9:9:341:0:0:0,-2.70927,-10 0/0:99:32:32:1113:0:0:0,-9.63296,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/0:56.2438:13:13:442:0:0:0,-3.91339,-10 0/0:48.1212:19:18:611:1:16:0,-2.84082,-10 0/0:56.2438:13:13:455:0:0:0,-3.91339,-10 0/0:41.1923:8:8:299:0:0:0,-2.40824,-10 0/0:71.2953:18:18:650:0:0:0,-5.41854,-10 0/0:99:32:32:1089:0:0:0,-9.63296,-10 0/0:56.2438:13:13:483:0:0:0,-3.91339,-10 0/0:89.3568:24:24:875:0:0:0,-7.22472,-10 0/0:38.182:7:7:257:0:0:0,-2.10721,-10 0/0:59.2541:14:14:476:0:0:0,-4.21442,-10 0/0:92.3669:26:25:924:0:0:0,-7.52575,-10 0/0:89.3568:24:24:821:0:0:0,-7.22472,-10 0/0:68.285:17:17:618:0:0:0,-5.11751,-10 0/0:59.2541:14:14:529:0:0:0,-4.21442,-10 0/0:62.2644:15:15:509:0:0:0,-4.51545,-10 0/0:92.3669:25:25:937:0:0:0,-7.52575,-10 0/0:32.1614:5:5:176:0:0:0,-1.50515,-10 0/0:35.1717:6:6:205:0:0:0,-1.80618,-10 0/0:56.2438:13:13:471:0:0:0,-3.91339,-10 0/0:44.2026:9:9:325:0:0:0,-2.70927,-10 0/0:41.1923:8:8:253:0:0:0,-2.40824,-10 0/0:32.1614:5:5:190:0:0:0,-1.50515,-10 0/0:38.182:7:7:249:0:0:0,-2.10721,-10 0/0:86.3467:23:23:821:0:0:0,-6.92369,-10 0/1:0.102046:17:0:0:17:614:-10,-5.11751,0 0/1:99:16:9:324:7:264:-10,0,-10 0/0:92.3669:25:25:908:0:0:0,-7.52575,-10 0/0:95.3767:26:26:956:0:0:0,-7.82678,-10 0/0:50.2232:11:11:362:0:0:0,-3.31133,-10 0/0:86.3467:23:23:827:0:0:0,-6.92369,-10 0/0:50.2232:12:11:416:0:0:0,-3.31133,-10 0/0:53.2335:12:12:452:0:0:0,-3.61236,-10 0/0:99:38:38:1295:0:0:0,-10,-10 0/0:92.3669:25:25:879:0:0:0,-7.52575,-10 0/0:74.3055:19:19:711:0:0:0,-5.71957,-10 0/0:99:32:32:1114:0:0:0,-9.63296,-10 0/0:56.2438:13:13:476:0:0:0,-3.91339,-10 0/0:99:41:41:1504:0:0:0,-10,-10 0/0:44.2026:9:9:298:0:0:0,-2.70927,-10 0/0:41.1923:8:8:259:0:0:0,-2.40824,-10 0/0:99:38:38:1325:0:0:0,-10,-10 0/0:68.285:17:17:585:0:0:0,-5.11751,-10 0/0:62.2644:15:15:526:0:0:0,-4.51545,-10 0/0:26.1408:3:3:114:0:0:0,-0.90309,-10 0/0:56.2438:13:13:482:0:0:0,-3.91339,-10 0/0:59.2541:14:14:529:0:0:0,-4.21442,-10 0/0:99:31:31:1039:0:0:0,-9.33193,-10 0/0:65.2747:16:16:598:0:0:0,-4.81648,-10 0/0:99:42:42:1498:0:0:0,-10,-10 0/0:50.2232:11:11:411:0:0:0,-3.31133,-10 0/0:29.1511:4:4:150:0:0:0,-1.20412,-10 0/0:59.2541:14:14:490:0:0:0,-4.21442,-10 0/0:62.2644:15:15:522:0:0:0,-4.51545,-10 0/0:37.1066:15:14:475:1:16:0,-1.73936,-10 0/0:99:30:30:1058:0:0:0,-9.0309,-10 0/0:35.1717:6:6:225:0:0:0,-1.80618,-10 0/0:62.2644:15:15:554:0:0:0,-4.51545,-10 0/0:92.3669:25:25:903:0:0:0,-7.52575,-10 0/0:80.3262:21:21:785:0:0:0,-6.32163,-10 0/0:65.2747:16:16:547:0:0:0,-4.81648,-10 0/0:99:29:29:1009:0:0:0,-8.72987,-10 0/0:44.2026:9:9:330:0:0:0,-2.70927,-10 0/0:68.285:17:17:621:0:0:0,-5.11751,-10 0/0:35.1717:6:6:228:0:0:0,-1.80618,-10 0/0:23.1305:2:2:67:0:0:0,-0.60206,-6.365 0/0:35.1717:6:6:169:0:0:0,-1.80618,-10 0/0:99:29:28:992:0:0:0,-8.42884,-10 0/0:99:29:29:1008:0:0:0,-8.72987,-10 0/0:86.3467:23:23:863:0:0:0,-6.92369,-10 0/0:56.2438:13:13:477:0:0:0,-3.91339,-10 0/0:86.3467:23:23:815:0:0:0,-6.92369,-10 0/0:44.2026:9:9:293:0:0:0,-2.70927,-10 0/0:95.3767:26:26:933:0:0:0,-7.82678,-10 0/0:41.1923:8:8:290:0:0:0,-2.40824,-10 0/0:47.2129:10:10:353:0:0:0,-3.0103,-10 0/0:59.2541:14:14:531:0:0:0,-4.21442,-10 0/0:62.2644:15:15:543:0:0:0,-4.51545,-10 0/0:53.2335:12:12:449:0:0:0,-3.61236,-10 scaffold_56 464214 . G A 202.723 . AB=0.642857;ABP=5.49198;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=1557;DPB=1557;DPRA=1.33929;EPP=6.48466;EPPR=24.9426;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9405;NS=92;NUMALT=1;ODDS=9.53282;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=372;QR=56302;RO=1547;RPP=24.725;RPPR=3362.28;RUN=1;SAF=3;SAP=6.48466;SAR=7;SRF=711;SRP=24.9426;SRR=836;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.5146:13:13:473:0:0:0,-3.91339,-10 0/0:50.4322:5:5:190:0:0:0,-1.50515,-10 0/0:86.5555:17:17:611:0:0:0,-5.11751,-10 0/0:77.5249:14:14:531:0:0:0,-4.21442,-10 0/1:99:14:5:186:9:336:-10,0,-10 0/0:68.494:11:11:390:0:0:0,-3.31133,-10 0/0:99:41:41:1503:0:0:0,-10,-10 0/0:89.5655:18:18:644:0:0:0,-5.41854,-10 0/0:71.5043:12:12:445:0:0:0,-3.61236,-10 0/0:53.4425:6:6:228:0:0:0,-1.80618,-10 0/0:56.4528:7:7:225:0:0:0,-2.10721,-10 0/0:62.4734:9:9:339:0:0:0,-2.70927,-10 0/0:99:33:33:1216:0:0:0,-9.93399,-10 0/0:81.4342:31:30:1116:1:36:0,-4.24057,-10 0/0:74.5146:13:13:482:0:0:0,-3.91339,-10 0/0:92.5752:19:19:691:0:0:0,-5.71957,-10 0/0:74.5146:13:13:476:0:0:0,-3.91339,-10 0/0:59.4631:8:8:300:0:0:0,-2.40824,-10 0/0:89.5655:18:18:662:0:0:0,-5.41854,-10 0/0:99:32:32:1145:0:0:0,-9.63296,-10 0/0:74.5146:13:13:476:0:0:0,-3.91339,-10 0/0:99:24:24:887:0:0:0,-7.22472,-10 0/0:56.4528:7:7:264:0:0:0,-2.10721,-10 0/0:77.5249:14:14:500:0:0:0,-4.21442,-10 0/0:99:26:26:925:0:0:0,-7.82678,-10 0/0:99:24:24:854:0:0:0,-7.22472,-10 0/0:86.5555:17:17:617:0:0:0,-5.11751,-10 0/0:77.5249:14:14:512:0:0:0,-4.21442,-10 0/0:80.5353:15:15:533:0:0:0,-4.51545,-10 0/0:99:25:25:945:0:0:0,-7.52575,-10 0/0:50.4322:5:5:181:0:0:0,-1.50515,-10 0/0:53.4425:6:6:201:0:0:0,-1.80618,-10 0/0:74.5146:13:13:478:0:0:0,-3.91339,-10 0/0:62.4734:9:9:328:0:0:0,-2.70927,-10 0/0:59.4631:8:8:292:0:0:0,-2.40824,-10 0/0:50.4322:5:5:190:0:0:0,-1.50515,-10 0/0:56.4528:7:7:264:0:0:0,-2.10721,-10 0/0:99:23:23:848:0:0:0,-6.92369,-10 0/0:86.5555:17:17:612:0:0:0,-5.11751,-10 0/0:83.5454:16:16:598:0:0:0,-4.81648,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:99:26:26:953:0:0:0,-7.82678,-10 0/0:68.494:11:11:385:0:0:0,-3.31133,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:71.5043:12:12:445:0:0:0,-3.61236,-10 0/0:71.5043:12:12:421:0:0:0,-3.61236,-10 0/0:99:38:38:1329:0:0:0,-10,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:92.5752:19:19:709:0:0:0,-5.71957,-10 0/0:99:32:32:1125:0:0:0,-9.63296,-10 0/0:74.5146:13:13:445:0:0:0,-3.91339,-10 0/0:99:41:41:1478:0:0:0,-10,-10 0/0:62.4734:9:9:307:0:0:0,-2.70927,-10 0/0:59.4631:8:8:279:0:0:0,-2.40824,-10 0/0:99:38:38:1383:0:0:0,-10,-10 0/0:86.5555:17:17:616:0:0:0,-5.11751,-10 0/0:80.5353:15:15:552:0:0:0,-4.51545,-10 0/0:44.4116:3:3:114:0:0:0,-0.90309,-10 0/0:74.5146:13:13:493:0:0:0,-3.91339,-10 0/0:77.5249:14:14:527:0:0:0,-4.21442,-10 0/0:99:31:31:1110:0:0:0,-9.33193,-10 0/0:83.5454:16:16:586:0:0:0,-4.81648,-10 0/0:99:42:42:1533:0:0:0,-10,-10 0/0:68.494:11:11:393:0:0:0,-3.31133,-10 0/0:47.4219:4:4:152:0:0:0,-1.20412,-10 0/0:77.5249:14:14:482:0:0:0,-4.21442,-10 0/0:80.5353:15:15:533:0:0:0,-4.51545,-10 0/0:80.5353:15:15:524:0:0:0,-4.51545,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:53.4425:6:6:228:0:0:0,-1.80618,-10 0/0:80.5353:15:15:562:0:0:0,-4.51545,-10 0/0:99:25:25:933:0:0:0,-7.52575,-10 0/0:98.5921:21:21:774:0:0:0,-6.32163,-10 0/0:83.5454:16:16:558:0:0:0,-4.81648,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:62.4734:9:9:319:0:0:0,-2.70927,-10 0/0:86.5555:17:17:630:0:0:0,-5.11751,-10 0/0:53.4425:6:6:226:0:0:0,-1.80618,-10 0/0:41.4013:2:2:75:0:0:0,-0.60206,-7.125 0/0:53.4425:6:6:213:0:0:0,-1.80618,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 0/0:99:29:29:1036:0:0:0,-8.72987,-10 0/0:99:23:23:864:0:0:0,-6.92369,-10 0/0:74.5146:13:13:466:0:0:0,-3.91339,-10 0/0:99:23:23:850:0:0:0,-6.92369,-10 0/0:62.4734:9:9:319:0:0:0,-2.70927,-10 0/0:99:26:26:952:0:0:0,-7.82678,-10 0/0:59.4631:8:8:293:0:0:0,-2.40824,-10 0/0:65.4837:10:10:370:0:0:0,-3.0103,-10 0/0:77.5249:14:14:532:0:0:0,-4.21442,-10 0/0:80.5353:15:15:551:0:0:0,-4.51545,-10 0/0:71.5043:12:12:439:0:0:0,-3.61236,-10 scaffold_56 464227 . T C 587.476 . AB=0.521739;ABP=3.19912;AC=2;AF=0.0108696;AN=184;AO=24;CIGAR=1X;DP=1564;DPB=1564;DPRA=1.36364;EPP=4.45795;EPPR=30.6472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9403;NS=92;NUMALT=1;ODDS=5.3606;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=865;QR=57046;RO=1540;RPP=55.1256;RPPR=3347.08;RUN=1;SAF=14;SAP=4.45795;SAR=10;SRF=700;SRP=30.6472;SRR=840;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.4479:13:13:492:0:0:0,-3.91339,-10 0/0:32.3655:5:5:190:0:0:0,-1.50515,-10 0/0:68.4891:17:17:625:0:0:0,-5.11751,-10 0/0:59.4582:14:14:509:0:0:0,-4.21442,-10 0/0:59.4582:14:14:514:0:0:0,-4.21442,-10 0/0:50.4273:11:11:413:0:0:0,-3.31133,-10 0/0:99:41:41:1530:0:0:0,-10,-10 0/0:74.5096:19:19:676:0:0:0,-5.71957,-10 0/0:53.4376:12:12:451:0:0:0,-3.61236,-10 0/0:35.3758:6:6:228:0:0:0,-1.80618,-10 0/0:38.3861:7:7:231:0:0:0,-2.10721,-10 0/0:44.4067:9:9:329:0:0:0,-2.70927,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:99:31:31:1170:0:0:0,-9.33193,-10 0/0:56.4479:13:13:486:0:0:0,-3.91339,-10 0/0:74.5096:19:19:697:0:0:0,-5.71957,-10 0/0:59.4582:14:14:496:0:0:0,-4.21442,-10 0/0:41.3964:8:8:304:0:0:0,-2.40824,-10 0/0:71.4993:18:18:680:0:0:0,-5.41854,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:56.4479:13:13:492:0:0:0,-3.91339,-10 0/0:89.5609:24:24:899:0:0:0,-7.22472,-10 0/0:38.3861:7:7:264:0:0:0,-2.10721,-10 0/0:59.4582:14:14:521:0:0:0,-4.21442,-10 0/0:95.5807:26:26:951:0:0:0,-7.82678,-10 0/0:89.5609:24:24:902:0:0:0,-7.22472,-10 0/0:68.4891:17:17:617:0:0:0,-5.11751,-10 0/0:62.4685:15:15:558:0:0:0,-4.51545,-10 0/0:62.4685:15:15:542:0:0:0,-4.51545,-10 0/0:95.5807:26:26:978:0:0:0,-7.82678,-10 0/0:32.3655:5:5:185:0:0:0,-1.50515,-10 0/0:35.3758:6:6:228:0:0:0,-1.80618,-10 0/0:56.4479:13:13:489:0:0:0,-3.91339,-10 0/0:44.4067:9:9:329:0:0:0,-2.70927,-10 0/0:41.3964:8:8:302:0:0:0,-2.40824,-10 0/0:32.3655:5:5:187:0:0:0,-1.50515,-10 0/0:38.3861:7:7:265:0:0:0,-2.10721,-10 0/0:86.5507:23:23:868:0:0:0,-6.92369,-10 0/0:68.4891:17:17:620:0:0:0,-5.11751,-10 0/0:65.4788:16:16:604:0:0:0,-4.81648,-10 0/0:92.5709:25:25:936:0:0:0,-7.52575,-10 0/0:95.5807:26:26:947:0:0:0,-7.82678,-10 0/0:53.4376:12:12:412:0:0:0,-3.61236,-10 0/0:86.5507:23:23:863:0:0:0,-6.92369,-10 0/0:53.4376:12:12:442:0:0:0,-3.61236,-10 0/0:53.4376:12:12:454:0:0:0,-3.61236,-10 0/0:99:38:38:1375:0:0:0,-10,-10 0/0:92.5709:25:25:920:0:0:0,-7.52575,-10 0/0:74.5096:19:19:720:0:0:0,-5.71957,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:56.4479:13:13:475:0:0:0,-3.91339,-10 0/0:99:41:41:1524:0:0:0,-10,-10 0/0:44.4067:9:9:319:0:0:0,-2.70927,-10 0/0:41.3964:8:8:296:0:0:0,-2.40824,-10 0/0:99:38:38:1392:0:0:0,-10,-10 0/0:68.4891:17:17:634:0:0:0,-5.11751,-10 0/0:62.4685:15:15:543:0:0:0,-4.51545,-10 0/0:26.3449:3:3:114:0:0:0,-0.90309,-10 0/0:56.4479:13:13:482:0:0:0,-3.91339,-10 0/0:59.4582:14:14:532:0:0:0,-4.21442,-10 0/0:99:31:31:1115:0:0:0,-9.33193,-10 0/0:65.4788:16:16:577:0:0:0,-4.81648,-10 0/0:99:42:42:1539:0:0:0,-10,-10 0/0:50.4273:11:11:391:0:0:0,-3.31133,-10 0/0:29.3552:4:4:151:0:0:0,-1.20412,-10 0/0:59.4582:14:14:532:0:0:0,-4.21442,-10 0/0:62.4685:15:15:568:0:0:0,-4.51545,-10 0/0:62.4685:15:15:560:0:0:0,-4.51545,-10 0/0:99:30:30:1129:0:0:0,-9.0309,-10 0/0:35.3758:6:6:226:0:0:0,-1.80618,-10 0/0:62.4685:15:15:568:0:0:0,-4.51545,-10 0/1:99:25:15:567:10:377:-10,0,-10 0/1:99:21:7:266:14:488:-10,0,-10 0/0:65.4788:16:16:574:0:0:0,-4.81648,-10 0/0:99:29:29:1093:0:0:0,-8.72987,-10 0/0:44.4067:9:9:314:0:0:0,-2.70927,-10 0/0:68.4891:17:17:644:0:0:0,-5.11751,-10 0/0:35.3758:6:6:227:0:0:0,-1.80618,-10 0/0:23.3346:2:2:76:0:0:0,-0.60206,-7.22 0/0:35.3758:6:6:225:0:0:0,-1.80618,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:86.5507:23:23:852:0:0:0,-6.92369,-10 0/0:56.4479:13:13:465:0:0:0,-3.91339,-10 0/0:86.5507:23:23:860:0:0:0,-6.92369,-10 0/0:44.4067:9:9:316:0:0:0,-2.70927,-10 0/0:95.5807:26:26:962:0:0:0,-7.82678,-10 0/0:41.3964:8:8:304:0:0:0,-2.40824,-10 0/0:47.417:10:10:367:0:0:0,-3.0103,-10 0/0:59.4582:14:14:529:0:0:0,-4.21442,-10 0/0:65.4788:16:16:599:0:0:0,-4.81648,-10 0/0:53.4376:12:12:430:0:0:0,-3.61236,-10 scaffold_56 464230 . T C 588.076 . AB=0.727273;ABP=17.8158;AC=2;AF=0.0108696;AN=184;AO=24;CIGAR=1X;DP=1564;DPB=1564;DPRA=0.969954;EPP=3.37221;EPPR=30.6472;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9403;NS=92;NUMALT=1;ODDS=3.79722;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=903;QR=56601;RO=1540;RPP=55.1256;RPPR=3321.07;RUN=1;SAF=11;SAP=3.37221;SAR=13;SRF=703;SRP=28.3291;SRR=837;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.543:13:13:494:0:0:0,-3.91339,-10 0/0:32.4606:5:5:190:0:0:0,-1.50515,-10 0/0:68.5842:17:17:613:0:0:0,-5.11751,-10 0/0:59.5533:14:14:517:0:0:0,-4.21442,-10 0/0:59.5533:14:14:521:0:0:0,-4.21442,-10 0/0:50.5224:11:11:387:0:0:0,-3.31133,-10 0/0:99:41:41:1498:0:0:0,-10,-10 0/0:74.6048:19:19:705:0:0:0,-5.71957,-10 0/0:53.5327:12:12:432:0:0:0,-3.61236,-10 0/0:35.4709:6:6:228:0:0:0,-1.80618,-10 0/0:38.4812:7:7:265:0:0:0,-2.10721,-10 0/0:44.5018:9:9:337:0:0:0,-2.70927,-10 0/0:99:33:33:1206:0:0:0,-9.93399,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:56.543:13:13:493:0:0:0,-3.91339,-10 0/0:74.6048:19:19:716:0:0:0,-5.71957,-10 0/0:59.5533:14:14:505:0:0:0,-4.21442,-10 0/0:41.4915:8:8:301:0:0:0,-2.40824,-10 0/0:71.5945:18:18:684:0:0:0,-5.41854,-10 0/0:99:32:32:1129:0:0:0,-9.63296,-10 0/0:56.543:13:13:484:0:0:0,-3.91339,-10 0/0:89.6555:24:24:882:0:0:0,-7.22472,-10 0/0:38.4812:7:7:257:0:0:0,-2.10721,-10 0/0:59.5533:14:14:519:0:0:0,-4.21442,-10 0/0:95.6738:26:26:959:0:0:0,-7.82678,-10 0/0:89.6555:24:24:862:0:0:0,-7.22472,-10 0/0:68.5842:17:17:604:0:0:0,-5.11751,-10 0/0:62.5636:15:15:543:0:0:0,-4.51545,-10 0/0:62.5636:15:15:531:0:0:0,-4.51545,-10 0/0:95.6738:26:26:951:0:0:0,-7.82678,-10 0/0:32.4606:5:5:179:0:0:0,-1.50515,-10 0/0:35.4709:6:6:220:0:0:0,-1.80618,-10 0/0:56.543:13:13:493:0:0:0,-3.91339,-10 0/0:44.5018:9:9:331:0:0:0,-2.70927,-10 0/0:41.4915:8:8:292:0:0:0,-2.40824,-10 0/0:32.4606:5:5:181:0:0:0,-1.50515,-10 0/0:38.4812:7:7:253:0:0:0,-2.10721,-10 0/0:86.6456:23:23:854:0:0:0,-6.92369,-10 0/1:0.0951764:17:0:0:17:637:-10,-5.11751,0 0/1:99:16:9:342:7:266:-10,0,-10 0/0:92.665:25:25:934:0:0:0,-7.52575,-10 0/0:95.6738:26:26:952:0:0:0,-7.82678,-10 0/0:53.5327:12:12:443:0:0:0,-3.61236,-10 0/0:86.6456:23:23:819:0:0:0,-6.92369,-10 0/0:53.5327:12:12:430:0:0:0,-3.61236,-10 0/0:53.5327:12:12:454:0:0:0,-3.61236,-10 0/0:99:38:38:1345:0:0:0,-10,-10 0/0:92.665:25:25:895:0:0:0,-7.52575,-10 0/0:74.6048:19:19:706:0:0:0,-5.71957,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/0:56.543:13:13:461:0:0:0,-3.91339,-10 0/0:99:41:41:1522:0:0:0,-10,-10 0/0:44.5018:9:9:309:0:0:0,-2.70927,-10 0/0:41.4915:8:8:301:0:0:0,-2.40824,-10 0/0:99:38:38:1394:0:0:0,-10,-10 0/0:68.5842:17:17:599:0:0:0,-5.11751,-10 0/0:62.5636:15:15:552:0:0:0,-4.51545,-10 0/0:26.44:3:3:113:0:0:0,-0.90309,-10 0/0:56.543:13:13:488:0:0:0,-3.91339,-10 0/0:59.5533:14:14:532:0:0:0,-4.21442,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:65.5739:16:16:559:0:0:0,-4.81648,-10 0/0:99:42:42:1553:0:0:0,-10,-10 0/0:50.5224:11:11:394:0:0:0,-3.31133,-10 0/0:29.4503:4:4:145:0:0:0,-1.20412,-10 0/0:59.5533:14:14:531:0:0:0,-4.21442,-10 0/0:62.5636:15:15:558:0:0:0,-4.51545,-10 0/0:62.5636:15:15:533:0:0:0,-4.51545,-10 0/0:99:30:30:1124:0:0:0,-9.0309,-10 0/0:35.4709:6:6:227:0:0:0,-1.80618,-10 0/0:62.5636:15:15:558:0:0:0,-4.51545,-10 0/0:92.665:25:25:934:0:0:0,-7.52575,-10 0/0:80.6254:21:21:787:0:0:0,-6.32163,-10 0/0:65.5739:16:16:536:0:0:0,-4.81648,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:44.5018:9:9:327:0:0:0,-2.70927,-10 0/0:68.5842:17:17:645:0:0:0,-5.11751,-10 0/0:35.4709:6:6:223:0:0:0,-1.80618,-10 0/0:23.4297:2:2:74:0:0:0,-0.60206,-7.03 0/0:35.4709:6:6:227:0:0:0,-1.80618,-10 0/0:99:30:30:1126:0:0:0,-9.0309,-10 0/0:99:29:29:1061:0:0:0,-8.72987,-10 0/0:86.6456:23:23:863:0:0:0,-6.92369,-10 0/0:56.543:13:13:460:0:0:0,-3.91339,-10 0/0:86.6456:23:23:860:0:0:0,-6.92369,-10 0/0:44.5018:9:9:332:0:0:0,-2.70927,-10 0/0:95.6738:26:26:971:0:0:0,-7.82678,-10 0/0:41.4915:8:8:304:0:0:0,-2.40824,-10 0/0:47.5121:10:10:378:0:0:0,-3.0103,-10 0/0:59.5533:14:14:525:0:0:0,-4.21442,-10 0/0:65.5739:16:16:592:0:0:0,-4.81648,-10 0/0:53.5327:12:12:449:0:0:0,-3.61236,-10 scaffold_56 464244 . A G 237.885 . AB=0.625;ABP=5.18177;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=1567;DPB=1567;DPRA=0.938749;EPP=3.87889;EPPR=23.8352;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9407;NS=92;NUMALT=1;ODDS=8.86707;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=377;QR=55628;RO=1552;RPP=24.725;RPPR=3286.84;RUN=1;SAF=4;SAP=3.87889;SAR=6;SRF=705;SRP=31.2227;SRR=847;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:71.6241:13:13:474:0:0:0,-3.91339,-10 0/0:47.5417:5:5:189:0:0:0,-1.50515,-10 0/0:83.6653:17:17:601:0:0:0,-5.11751,-10 0/0:74.6344:14:14:505:0:0:0,-4.21442,-10 0/0:74.6344:14:14:510:0:0:0,-4.21442,-10 0/0:65.6035:11:11:388:0:0:0,-3.31133,-10 0/0:99:41:41:1526:0:0:0,-10,-10 0/0:89.6859:19:19:671:0:0:0,-5.71957,-10 0/0:68.6138:12:12:429:0:0:0,-3.61236,-10 0/0:50.552:6:6:228:0:0:0,-1.80618,-10 0/0:53.5623:7:7:262:0:0:0,-2.10721,-10 0/0:59.5829:9:9:339:0:0:0,-2.70927,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:99:31:31:1113:0:0:0,-9.33193,-10 0/0:71.6241:13:13:476:0:0:0,-3.91339,-10 0/0:89.6859:19:19:652:0:0:0,-5.71957,-10 0/0:71.6241:14:13:476:0:0:0,-3.91339,-10 0/0:56.5726:8:8:256:0:0:0,-2.40824,-10 0/0:86.6756:18:18:673:0:0:0,-5.41854,-10 0/0:99:32:31:1080:0:0:0,-9.33193,-10 0/0:71.6241:13:13:482:0:0:0,-3.91339,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/0:53.5623:7:7:262:0:0:0,-2.10721,-10 0/0:74.6344:14:14:478:0:0:0,-4.21442,-10 0/0:99:26:26:887:0:0:0,-7.82678,-10 0/0:99:24:24:850:0:0:0,-7.22472,-10 0/0:83.6653:17:17:613:0:0:0,-5.11751,-10 0/0:77.6447:15:15:558:0:0:0,-4.51545,-10 0/0:77.6447:15:15:531:0:0:0,-4.51545,-10 0/0:99:26:26:902:0:0:0,-7.82678,-10 0/0:47.5417:5:5:177:0:0:0,-1.50515,-10 0/0:50.552:6:6:201:0:0:0,-1.80618,-10 0/0:71.6241:13:13:483:0:0:0,-3.91339,-10 0/0:59.5829:9:9:323:0:0:0,-2.70927,-10 0/0:56.5726:8:8:270:0:0:0,-2.40824,-10 0/0:47.5417:5:5:174:0:0:0,-1.50515,-10 0/0:53.5623:7:7:265:0:0:0,-2.10721,-10 0/0:99:23:23:811:0:0:0,-6.92369,-10 0/0:83.6653:17:17:635:0:0:0,-5.11751,-10 0/0:80.6549:16:16:569:0:0:0,-4.81648,-10 0/0:99:25:25:927:0:0:0,-7.52575,-10 0/0:99:26:26:945:0:0:0,-7.82678,-10 0/0:65.6035:12:11:377:0:0:0,-3.31133,-10 0/0:99:23:23:812:0:0:0,-6.92369,-10 0/0:68.6138:12:12:431:0:0:0,-3.61236,-10 0/0:68.6138:12:12:451:0:0:0,-3.61236,-10 0/0:99:39:38:1356:0:0:0,-10,-10 0/0:99:25:25:848:0:0:0,-7.52575,-10 0/0:89.6859:19:19:678:0:0:0,-5.71957,-10 0/0:99:32:32:1126:0:0:0,-9.63296,-10 0/0:71.6241:13:13:487:0:0:0,-3.91339,-10 0/0:99:42:42:1547:0:0:0,-10,-10 0/0:59.5829:9:9:310:0:0:0,-2.70927,-10 0/0:56.5726:8:8:263:0:0:0,-2.40824,-10 0/0:99:38:38:1390:0:0:0,-10,-10 0/0:83.6653:17:17:591:0:0:0,-5.11751,-10 0/0:77.6447:15:15:542:0:0:0,-4.51545,-10 0/0:41.5211:3:3:114:0:0:0,-0.90309,-10 0/0:71.6241:13:13:480:0:0:0,-3.91339,-10 0/0:74.6344:14:14:519:0:0:0,-4.21442,-10 0/0:99:31:31:1053:0:0:0,-9.33193,-10 0/0:80.6549:16:16:537:0:0:0,-4.81648,-10 0/0:99:42:42:1485:0:0:0,-10,-10 0/0:65.6035:11:11:369:0:0:0,-3.31133,-10 0/0:44.5314:4:4:152:0:0:0,-1.20412,-10 0/0:74.6344:14:14:474:0:0:0,-4.21442,-10 0/0:77.6447:15:15:530:0:0:0,-4.51545,-10 0/0:77.6447:15:15:531:0:0:0,-4.51545,-10 0/0:99:30:30:1039:0:0:0,-9.0309,-10 0/0:50.552:6:6:220:0:0:0,-1.80618,-10 0/0:77.6447:15:15:542:0:0:0,-4.51545,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:98.7168:22:22:816:0:0:0,-6.62266,-10 0/0:80.6549:16:16:579:0:0:0,-4.81648,-10 0/0:99:29:29:1026:0:0:0,-8.72987,-10 0/0:59.5829:9:9:328:0:0:0,-2.70927,-10 0/0:83.6653:17:17:622:0:0:0,-5.11751,-10 0/0:50.552:6:6:225:0:0:0,-1.80618,-10 0/0:38.5108:2:2:75:0:0:0,-0.60206,-7.125 0/0:50.552:6:6:212:0:0:0,-1.80618,-10 0/0:99:30:29:1002:0:0:0,-8.72987,-10 0/0:99:29:29:1012:0:0:0,-8.72987,-10 0/0:99:23:23:845:0:0:0,-6.92369,-10 0/0:71.6241:13:13:478:0:0:0,-3.91339,-10 0/0:99:23:23:811:0:0:0,-6.92369,-10 0/0:59.5829:9:9:337:0:0:0,-2.70927,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:56.5726:8:8:301:0:0:0,-2.40824,-10 0/0:62.5932:10:10:372:0:0:0,-3.0103,-10 0/0:74.6344:14:14:517:0:0:0,-4.21442,-10 0/1:99:16:6:228:10:377:-10,0,-10 0/0:68.6138:12:12:446:0:0:0,-3.61236,-10 scaffold_56 521352 . G A 330.919 . AB=0.571429;ABP=4.25114;AC=2;AF=0.0108696;AN=184;AO=16;CIGAR=1X;DP=1163;DPB=1163;DPRA=1.11013;EPP=37.7539;EPPR=2465.53;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9267;NS=92;NUMALT=1;ODDS=5.74037;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=551;QR=42360;RO=1146;RPP=3.55317;RPPR=7.37598;RUN=1;SAF=7;SAP=3.55317;SAR=9;SRF=546;SRP=8.53562;SRR=600;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.1025:13:13:470:0:0:0,-3.91339,-10 0/0:40.0304:6:6:218:0:0:0,-1.80618,-10 0/0:52.0716:10:10:352:0:0:0,-3.0103,-10 0/0:55.0819:11:11:390:0:0:0,-3.31133,-10 0/0:58.0922:12:12:432:0:0:0,-3.61236,-10 0/0:37.0201:5:5:185:0:0:0,-1.50515,-10 0/0:76.154:18:18:651:0:0:0,-5.41854,-10 0/0:76.154:18:18:684:0:0:0,-5.41854,-10 0/0:30.9995:3:3:114:0:0:0,-0.90309,-10 0/0:27.9892:2:2:71:0:0:0,-0.60206,-6.745 0/0:52.0716:10:10:356:0:0:0,-3.0103,-10 0/0:37.0201:5:5:190:0:0:0,-1.50515,-10 0/0:91.2051:23:23:860:0:0:0,-6.92369,-10 0/0:82.1746:20:20:727:0:0:0,-6.0206,-10 0/0:91.2051:23:23:840:0:0:0,-6.92369,-10 0/0:64.1128:14:14:520:0:0:0,-4.21442,-10 0/0:58.0922:12:12:446:0:0:0,-3.61236,-10 0/0:34.0098:4:4:151:0:0:0,-1.20412,-10 0/0:85.1848:21:21:791:0:0:0,-6.32163,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:58.0922:12:12:446:0:0:0,-3.61236,-10 0/0:79.1643:19:19:721:0:0:0,-5.71957,-10 0/0:52.0716:10:10:363:0:0:0,-3.0103,-10 0/0:64.1128:14:14:529:0:0:0,-4.21442,-10 0/0:85.1848:21:21:772:0:0:0,-6.32163,-10 0/0:79.1643:19:19:720:0:0:0,-5.71957,-10 0/0:49.0613:9:9:338:0:0:0,-2.70927,-10 0/0:67.1231:15:15:566:0:0:0,-4.51545,-10 0/0:46.051:8:8:303:0:0:0,-2.40824,-10 0/0:91.2051:23:23:858:0:0:0,-6.92369,-10 0/0:34.0098:4:4:148:0:0:0,-1.20412,-10 0/0:46.051:8:8:299:0:0:0,-2.40824,-10 0/0:61.1025:13:13:493:0:0:0,-3.91339,-10 0/0:55.0819:11:11:413:0:0:0,-3.31133,-10 0/0:55.0819:11:11:417:0:0:0,-3.31133,-10 0/0:37.0201:5:5:190:0:0:0,-1.50515,-10 0/0:55.0819:11:11:418:0:0:0,-3.31133,-10 0/1:56.4331:11:8:303:3:98:-8.05282,0,-10 0/0:43.0407:7:7:241:0:0:0,-2.10721,-10 0/0:55.0819:11:11:413:0:0:0,-3.31133,-10 0/0:85.1848:21:21:797:0:0:0,-6.32163,-10 0/0:67.1231:15:15:566:0:0:0,-4.51545,-10 0/0:52.0716:10:10:372:0:0:0,-3.0103,-10 0/1:99:17:4:152:13:453:-10,0,-10 0/0:73.1437:17:17:573:0:0:0,-5.11751,-10 0/0:70.1334:16:16:582:0:0:0,-4.81648,-10 0/0:94.2151:24:24:857:0:0:0,-7.22472,-10 0/0:70.1334:16:16:599:0:0:0,-4.81648,-10 0/0:61.1025:13:13:462:0:0:0,-3.91339,-10 0/0:82.1746:20:20:749:0:0:0,-6.0206,-10 0/0:30.9995:3:3:114:0:0:0,-0.90309,-10 0/0:64.1128:14:14:508:0:0:0,-4.21442,-10 0/0:55.0819:11:11:409:0:0:0,-3.31133,-10 0/0:24.9789:1:1:38:0:0:0,-0.30103,-3.8 0/0:99:35:35:1248:0:0:0,-10,-10 0/0:40.0304:6:6:228:0:0:0,-1.80618,-10 0/0:58.0922:12:12:444:0:0:0,-3.61236,-10 0/0:43.0407:7:7:242:0:0:0,-2.10721,-10 0/0:67.1231:15:15:563:0:0:0,-4.51545,-10 0/0:37.0201:5:5:186:0:0:0,-1.50515,-10 0/0:79.1643:19:19:719:0:0:0,-5.71957,-10 0/0:49.0613:9:9:342:0:0:0,-2.70927,-10 0/0:76.154:18:18:683:0:0:0,-5.41854,-10 0/0:64.1128:14:14:532:0:0:0,-4.21442,-10 0/0:61.1025:13:13:491:0:0:0,-3.91339,-10 0/0:79.1643:19:19:722:0:0:0,-5.71957,-10 0/0:52.0716:10:10:367:0:0:0,-3.0103,-10 0/0:27.9892:3:2:75:0:0:0,-0.60206,-6.90667 0/0:85.1848:21:21:765:0:0:0,-6.32163,-10 0/0:34.0098:4:4:152:0:0:0,-1.20412,-10 0/0:46.051:8:8:303:0:0:0,-2.40824,-10 0/0:79.1643:19:19:718:0:0:0,-5.71957,-10 0/0:61.1025:13:13:487:0:0:0,-3.91339,-10 0/0:37.0201:5:5:166:0:0:0,-1.50515,-10 0/0:85.1848:21:21:743:0:0:0,-6.32163,-10 0/0:52.0716:10:10:380:0:0:0,-3.0103,-10 0/0:46.051:8:8:304:0:0:0,-2.40824,-10 0/0:52.0716:10:10:376:0:0:0,-3.0103,-10 0/0:34.0098:4:4:152:0:0:0,-1.20412,-10 0/0:55.0819:11:11:403:0:0:0,-3.31133,-10 0/0:88.195:22:22:835:0:0:0,-6.62266,-10 0/0:67.1231:15:15:536:0:0:0,-4.51545,-10 0/0:67.1231:15:15:537:0:0:0,-4.51545,-10 0/0:58.0922:12:12:421:0:0:0,-3.61236,-10 0/0:49.0613:9:9:342:0:0:0,-2.70927,-10 0/0:49.0613:9:9:327:0:0:0,-2.70927,-10 0/0:67.1231:15:15:566:0:0:0,-4.51545,-10 0/0:49.0613:9:9:338:0:0:0,-2.70927,-10 0/0:40.0304:6:6:227:0:0:0,-1.80618,-10 0/0:58.0922:12:12:451:0:0:0,-3.61236,-10 0/0:58.0922:12:12:456:0:0:0,-3.61236,-10 0/0:52.0716:10:10:327:0:0:0,-3.0103,-10 scaffold_56 566423 . G A 300.114 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=16;CIGAR=1X;DP=1223;DPB=1223;DPRA=1.81062;EPP=3.0103;EPPR=4.52331;GTI=0;LEN=1;MEANALT=1;MQM=58.125;MQMR=59.9892;NS=92;NUMALT=1;ODDS=4.20406;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=517;QR=43823;RO=1207;RPP=37.7539;RPPR=2436.37;RUN=1;SAF=8;SAP=3.0103;SAR=8;SRF=611;SRP=3.41509;SRR=596;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.7274:15:15:510:0:0:0,-4.51545,-10 0/0:36.645:7:7:223:0:0:0,-2.10721,-10 0/0:57.7171:14:14:505:0:0:0,-4.21442,-10 0/0:51.6965:12:12:422:0:0:0,-3.61236,-10 0/0:48.6862:11:11:416:0:0:0,-3.31133,-10 0/0:36.645:7:7:266:0:0:0,-2.10721,-10 0/0:93.8398:26:26:899:0:0:0,-7.82678,-10 0/0:63.7377:16:16:579:0:0:0,-4.81648,-10 0/0:36.645:7:7:256:0:0:0,-2.10721,-10 0/0:18.5832:1:1:38:0:0:0,-0.30103,-3.8 0/0:27.6141:4:4:151:0:0:0,-1.20412,-10 0/0:39.6553:8:8:294:0:0:0,-2.40824,-10 0/0:51.4704:21:20:746:1:16:0,-3.39941,-10 0/0:60.7274:15:15:557:0:0:0,-4.51545,-10 0/0:39.6553:8:8:294:0:0:0,-2.40824,-10 0/0:51.6965:12:12:452:0:0:0,-3.61236,-10 0/0:39.6553:8:8:302:0:0:0,-2.40824,-10 0/0:33.6347:6:6:219:0:0:0,-1.80618,-10 0/0:75.7789:20:20:738:0:0:0,-6.0206,-10 0/0:99:40:40:1414:0:0:0,-10,-10 0/0:51.6965:12:12:448:0:0:0,-3.61236,-10 0/0:99:33:33:1154:0:0:0,-9.93399,-10 0/0:18.5832:1:1:38:0:0:0,-0.30103,-3.8 0/0:39.6553:8:8:293:0:0:0,-2.40824,-10 0/0:39.6553:8:8:253:0:0:0,-2.40824,-10 0/0:51.6965:12:12:384:0:0:0,-3.61236,-10 0/0:72.7686:19:19:676:0:0:0,-5.71957,-10 0/0:33.6347:6:6:217:0:0:0,-1.80618,-10 0/0:69.7583:18:18:684:0:0:0,-5.41854,-10 0/0:99:29:29:1050:0:0:0,-8.72987,-10 0/0:18.5832:1:1:38:0:0:0,-0.30103,-3.8 0/0:33.6347:6:6:223:0:0:0,-1.80618,-10 0/0:51.6965:12:12:416:0:0:0,-3.61236,-10 0/0:30.6244:5:5:174:0:0:0,-1.50515,-10 0/0:45.6759:10:10:372:0:0:0,-3.0103,-10 0/0:21.5935:2:2:76:0:0:0,-0.60206,-7.22 0/0:39.6553:8:8:295:0:0:0,-2.40824,-10 0/0:69.7583:18:18:634:0:0:0,-5.41854,-10 0/0:36.645:7:7:238:0:0:0,-2.10721,-10 0/0:57.7171:14:14:502:0:0:0,-4.21442,-10 0/0:66.748:17:17:623:0:0:0,-5.11751,-10 0/0:66.748:17:17:632:0:0:0,-5.11751,-10 0/0:54.7068:13:13:478:0:0:0,-3.91339,-10 0/0:90.8299:25:25:934:0:0:0,-7.52575,-10 0/0:81.7995:22:22:801:0:0:0,-6.62266,-10 0/0:54.7068:13:13:494:0:0:0,-3.91339,-10 0/0:99:36:36:1301:0:0:0,-10,-10 0/0:57.7171:14:14:517:0:0:0,-4.21442,-10 0/0:60.7274:15:15:559:0:0:0,-4.51545,-10 0/0:51.4704:21:20:712:1:16:0,-3.39941,-10 0/0:33.6347:6:6:223:0:0:0,-1.80618,-10 0/0:90.8299:25:25:898:0:0:0,-7.52575,-10 0/0:60.7274:15:15:560:0:0:0,-4.51545,-10 0/0:39.6553:8:8:304:0:0:0,-2.40824,-10 0/0:62.7544:25:24:894:1:16:0,-4.52781,-10 0/0:36.645:7:7:256:0:0:0,-2.10721,-10 0/0:57.7171:14:14:527:0:0:0,-4.21442,-10 0/0:21.5935:2:2:72:0:0:0,-0.60206,-6.84 0/0:39.6553:8:8:280:0:0:0,-2.40824,-10 0/0:45.6759:10:10:352:0:0:0,-3.0103,-10 0/0:63.7377:16:16:579:0:0:0,-4.81648,-10 0/0:63.7377:16:16:572:0:0:0,-4.81648,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:72.7686:19:19:706:0:0:0,-5.71957,-10 0/0:42.6656:9:9:336:0:0:0,-2.70927,-10 0/0:78.7892:21:21:786:0:0:0,-6.32163,-10 0/0:60.7274:15:15:540:0:0:0,-4.51545,-10 0/0:51.6965:12:12:443:0:0:0,-3.61236,-10 0/1:99:26:13:482:13:469:-10,0,-10 0/0:48.6862:11:11:413:0:0:0,-3.31133,-10 0/0:60.7274:15:15:565:0:0:0,-4.51545,-10 0/0:72.7686:19:19:660:0:0:0,-5.71957,-10 0/0:57.7171:14:14:526:0:0:0,-4.21442,-10 0/0:33.6347:6:6:206:0:0:0,-1.80618,-10 0/0:90.8299:25:25:875:0:0:0,-7.52575,-10 0/0:27.6141:4:4:151:0:0:0,-1.20412,-10 0/0:33.6347:6:6:225:0:0:0,-1.80618,-10 0/0:33.6347:6:6:210:0:0:0,-1.80618,-10 0/0:27.6141:4:4:151:0:0:0,-1.20412,-10 0/0:45.6759:10:10:362:0:0:0,-3.0103,-10 0/0:63.7377:16:16:600:0:0:0,-4.81648,-10 0/0:66.748:17:17:573:0:0:0,-5.11751,-10 0/0:75.7789:20:20:730:0:0:0,-6.0206,-10 0/0:57.7171:14:14:512:0:0:0,-4.21442,-10 0/0:66.748:17:17:643:0:0:0,-5.11751,-10 0/0:24.6038:3:3:114:0:0:0,-0.90309,-10 0/0:51.6965:12:12:453:0:0:0,-3.61236,-10 0/0:30.6244:5:5:190:0:0:0,-1.50515,-10 0/0:30.6244:5:5:186:0:0:0,-1.50515,-10 0/0:39.6553:8:8:275:0:0:0,-2.40824,-10 0/0:48.6862:11:11:382:0:0:0,-3.31133,-10 0/0:39.6553:8:8:303:0:0:0,-2.40824,-10 scaffold_56 571432 . G A 231.7 . AB=0.357143;ABP=7.97367;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1547;DPB=1547;DPRA=1.44096;EPP=4.78696;EPPR=12.2918;GTI=0;LEN=1;MEANALT=1;MQM=59.8182;MQMR=59.959;NS=92;NUMALT=1;ODDS=8.77392;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=396;QR=56309;RO=1535;RPP=26.8965;RPPR=3318.87;RUN=1;SAF=7;SAP=4.78696;SAR=4;SRF=810;SRP=13.2311;SRR=725;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:68.2086:12:12:408:0:0:0,-3.61236,-10 0/0:62.188:10:10:369:0:0:0,-3.0103,-10 0/0:61.6847:20:19:676:1:16:0,-3.11957,-10 0/0:56.1674:8:8:295:0:0:0,-2.40824,-10 0/0:74.2292:14:14:500:0:0:0,-4.21442,-10 0/0:68.2086:12:12:419:0:0:0,-3.61236,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:99:27:27:978:0:0:0,-8.12781,-10 0/0:65.1983:11:11:416:0:0:0,-3.31133,-10 0/0:38.1056:2:2:76:0:0:0,-0.60206,-7.22 0/0:65.1983:11:11:411:0:0:0,-3.31133,-10 0/0:53.1571:7:7:258:0:0:0,-2.10721,-10 0/0:99:38:38:1390:0:0:0,-10,-10 0/0:99:25:25:909:0:0:0,-7.52575,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/1:99:28:18:655:10:380:-10,0,-10 0/0:99:23:23:858:0:0:0,-6.92369,-10 0/0:56.1674:8:8:303:0:0:0,-2.40824,-10 0/0:71.2189:13:13:476:0:0:0,-3.91339,-10 0/0:99:32:31:1070:0:0:0,-9.33193,-10 0/0:59.1777:9:9:340:0:0:0,-2.70927,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:53.1571:7:7:266:0:0:0,-2.10721,-10 0/0:71.2189:13:13:465:0:0:0,-3.91339,-10 0/0:68.2086:12:12:453:0:0:0,-3.61236,-10 0/0:74.2292:14:14:530:0:0:0,-4.21442,-10 0/0:80.2497:16:16:599:0:0:0,-4.81648,-10 0/0:68.2086:12:12:443:0:0:0,-3.61236,-10 0/0:71.2189:13:13:494:0:0:0,-3.91339,-10 0/0:99:32:32:1134:0:0:0,-9.63296,-10 0/0:50.1468:6:6:228:0:0:0,-1.80618,-10 0/0:59.1777:9:9:310:0:0:0,-2.70927,-10 0/0:77.2395:15:15:552:0:0:0,-4.51545,-10 0/0:56.1674:8:8:300:0:0:0,-2.40824,-10 0/0:74.2292:14:14:530:0:0:0,-4.21442,-10 0/0:56.1674:8:8:303:0:0:0,-2.40824,-10 0/0:68.2086:12:12:442:0:0:0,-3.61236,-10 0/0:99:33:33:1202:0:0:0,-9.93399,-10 0/0:74.2292:14:14:531:0:0:0,-4.21442,-10 0/0:56.1674:8:8:301:0:0:0,-2.40824,-10 0/0:99:35:35:1309:0:0:0,-10,-10 0/0:99:25:25:923:0:0:0,-7.52575,-10 0/0:80.2497:16:16:602:0:0:0,-4.81648,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 0/0:77.2395:15:15:568:0:0:0,-4.51545,-10 0/0:99:23:23:841:0:0:0,-6.92369,-10 0/0:92.2899:20:20:746:0:0:0,-6.0206,-10 0/0:89.2802:19:19:686:0:0:0,-5.71957,-10 0/0:86.2701:18:18:663:0:0:0,-5.41854,-10 0/0:99:29:29:1094:0:0:0,-8.72987,-10 0/0:80.2497:16:16:600:0:0:0,-4.81648,-10 0/0:99:26:26:941:0:0:0,-7.82678,-10 0/0:59.1777:9:9:310:0:0:0,-2.70927,-10 0/0:56.1674:8:8:304:0:0:0,-2.40824,-10 0/0:99:37:37:1385:0:0:0,-10,-10 0/0:53.1571:7:7:261:0:0:0,-2.10721,-10 0/0:86.2701:18:18:643:0:0:0,-5.41854,-10 0/0:77.2395:15:15:545:0:0:0,-4.51545,-10 0/0:83.26:17:17:601:0:0:0,-5.11751,-10 0/0:68.2086:12:12:435:0:0:0,-3.61236,-10 0/0:99:26:26:986:0:0:0,-7.82678,-10 0/0:62.188:10:10:336:0:0:0,-3.0103,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:53.1571:7:7:261:0:0:0,-2.10721,-10 0/0:53.1571:7:7:266:0:0:0,-2.10721,-10 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:74.2292:14:14:519:0:0:0,-4.21442,-10 0/0:53.1571:7:7:260:0:0:0,-2.10721,-10 0/0:80.2497:16:16:581:0:0:0,-4.81648,-10 0/0:59.1777:9:9:342:0:0:0,-2.70927,-10 0/0:77.2395:15:15:542:0:0:0,-4.51545,-10 0/0:99:26:26:972:0:0:0,-7.82678,-10 0/0:83.26:17:17:617:0:0:0,-5.11751,-10 0/0:86.2701:18:18:665:0:0:0,-5.41854,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 0/0:65.1983:11:11:383:0:0:0,-3.31133,-10 0/0:74.2292:14:14:528:0:0:0,-4.21442,-10 0/0:68.2086:12:12:420:0:0:0,-3.61236,-10 0/0:53.1571:7:7:244:0:0:0,-2.10721,-10 0/0:77.2395:15:15:567:0:0:0,-4.51545,-10 0/0:99:23:23:842:0:0:0,-6.92369,-10 0/0:98.3073:22:22:805:0:0:0,-6.62266,-10 0/0:89.2802:19:19:713:0:0:0,-5.71957,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:74.2292:14:14:520:0:0:0,-4.21442,-10 0/0:68.2086:12:12:436:0:0:0,-3.61236,-10 0/0:68.2086:12:12:455:0:0:0,-3.61236,-10 0/0:62.188:10:10:369:0:0:0,-3.0103,-10 0/0:56.1674:8:8:275:0:0:0,-2.40824,-10 0/0:92.2899:20:20:746:0:0:0,-6.0206,-10 0/0:99:27:27:934:0:0:0,-8.12781,-10 0/0:83.26:17:17:619:0:0:0,-5.11751,-10 scaffold_56 571452 . A G 1515.49 . AB=0.589041;ABP=8.03741;AC=5;AF=0.0271739;AN=184;AO=61;CIGAR=1X;DP=1554;DPB=1554;DPRA=1.4956;EPP=4.7546;EPPR=21.6069;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9564;NS=92;NUMALT=1;ODDS=0.945586;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2195;QR=53644;RO=1491;RPP=135.47;RPPR=3103.19;RUN=1;SAF=27;SAP=4.7546;SAR=34;SRF=788;SRP=13.5327;SRR=703;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:43.2572:12:12:450:0:0:0,-3.61236,-10 0/0:37.2366:10:10:352:0:0:0,-3.0103,-10 0/0:67.3396:20:20:692:0:0:0,-6.0206,-10 0/0:31.216:8:8:293:0:0:0,-2.40824,-10 0/0:49.2778:14:14:503:0:0:0,-4.21442,-10 0/0:43.2572:12:12:411:0:0:0,-3.61236,-10 0/0:88.411:27:27:1000:0:0:0,-8.12781,-10 0/0:88.411:27:27:999:0:0:0,-8.12781,-10 0/0:40.2469:11:11:374:0:0:0,-3.31133,-10 0/0:13.1542:2:2:54:0:0:0,-0.60206,-5.13 0/0:40.2469:11:11:402:0:0:0,-3.31133,-10 0/0:28.2057:7:7:256:0:0:0,-2.10721,-10 0/0:99:38:38:1358:0:0:0,-10,-10 0/0:82.3909:25:25:881:0:0:0,-7.52575,-10 0/1:99:28:14:519:14:527:-10,0,-10 0/0:91.4207:28:28:1010:0:0:0,-8.42884,-10 0/0:76.3704:23:23:842:0:0:0,-6.92369,-10 0/0:31.216:8:8:302:0:0:0,-2.40824,-10 0/0:46.2675:13:13:466:0:0:0,-3.91339,-10 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/0:34.2263:9:9:319:0:0:0,-2.70927,-10 0/0:76.3704:23:23:851:0:0:0,-6.92369,-10 0/0:28.2057:7:7:237:0:0:0,-2.10721,-10 0/0:46.2675:13:13:469:0:0:0,-3.91339,-10 0/0:43.2572:12:12:454:0:0:0,-3.61236,-10 0/0:49.2778:14:14:529:0:0:0,-4.21442,-10 0/0:58.3087:17:17:642:0:0:0,-5.11751,-10 0/0:43.2572:12:12:397:0:0:0,-3.61236,-10 0/0:46.2675:13:13:489:0:0:0,-3.91339,-10 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/0:25.1954:6:6:192:0:0:0,-1.80618,-10 0/0:34.2263:9:9:282:0:0:0,-2.70927,-10 0/0:52.2881:15:15:555:0:0:0,-4.51545,-10 0/0:31.216:8:8:304:0:0:0,-2.40824,-10 0/0:49.2778:14:14:499:0:0:0,-4.21442,-10 0/0:31.216:8:8:290:0:0:0,-2.40824,-10 0/0:43.2572:12:12:455:0:0:0,-3.61236,-10 0/0:80.0509:33:32:1147:1:14:0,-7.01548,-10 0/1:1.2563:14:0:0:14:524:-10,-4.21442,0 0/0:31.216:8:8:303:0:0:0,-2.40824,-10 0/0:99:35:35:1232:0:0:0,-10,-10 0/0:82.3909:25:25:846:0:0:0,-7.52575,-10 0/0:55.2984:16:16:602:0:0:0,-4.81648,-10 0/0:82.3909:25:25:929:0:0:0,-7.52575,-10 0/0:52.2881:15:15:562:0:0:0,-4.51545,-10 0/0:76.3704:23:23:777:0:0:0,-6.92369,-10 0/0:67.3396:20:20:692:0:0:0,-6.0206,-10 0/0:64.3293:19:19:684:0:0:0,-5.71957,-10 0/0:64.3293:19:19:701:0:0:0,-5.71957,-10 0/0:99:31:31:1117:0:0:0,-9.33193,-10 0/0:55.2984:16:16:603:0:0:0,-4.81648,-10 0/0:85.4011:26:26:973:0:0:0,-7.82678,-10 0/0:34.2263:9:9:317:0:0:0,-2.70927,-10 0/0:31.216:8:8:301:0:0:0,-2.40824,-10 0/0:99:37:37:1379:0:0:0,-10,-10 0/0:34.2263:9:9:335:0:0:0,-2.70927,-10 0/0:61.319:18:18:656:0:0:0,-5.41854,-10 0/0:52.2881:15:15:520:0:0:0,-4.51545,-10 1/1:14.809:17:0:0:17:585:-10,-5.11751,0 0/0:43.2572:12:12:443:0:0:0,-3.61236,-10 0/0:85.4011:26:26:958:0:0:0,-7.82678,-10 0/0:37.2366:10:10:343:0:0:0,-3.0103,-10 0/1:99:31:16:552:15:545:-10,0,-10 0/0:28.2057:7:7:257:0:0:0,-2.10721,-10 0/0:28.2057:7:7:256:0:0:0,-2.10721,-10 0/0:85.4011:26:26:954:0:0:0,-7.82678,-10 0/0:49.2778:14:14:487:0:0:0,-4.21442,-10 0/0:28.2057:7:7:243:0:0:0,-2.10721,-10 0/0:55.2984:16:16:556:0:0:0,-4.81648,-10 0/0:34.2263:9:9:296:0:0:0,-2.70927,-10 0/0:52.2881:15:15:518:0:0:0,-4.51545,-10 0/0:85.4011:26:26:928:0:0:0,-7.82678,-10 0/0:58.3087:17:17:634:0:0:0,-5.11751,-10 0/0:61.319:18:18:619:0:0:0,-5.41854,-10 0/0:79.3807:24:24:845:0:0:0,-7.22472,-10 0/0:40.2469:11:11:395:0:0:0,-3.31133,-10 0/0:49.2778:14:14:528:0:0:0,-4.21442,-10 0/0:43.2572:12:12:399:0:0:0,-3.61236,-10 0/0:28.2057:7:7:248:0:0:0,-2.10721,-10 0/0:49.2778:15:14:524:0:0:0,-4.21442,-10 0/0:79.3807:24:24:812:0:0:0,-7.22472,-10 0/0:73.3602:22:22:791:0:0:0,-6.62266,-10 0/0:64.3293:19:19:695:0:0:0,-5.71957,-10 0/0:85.4011:26:26:958:0:0:0,-7.82678,-10 0/0:49.2778:14:14:518:0:0:0,-4.21442,-10 0/0:43.2572:12:12:422:0:0:0,-3.61236,-10 0/0:43.2572:12:12:431:0:0:0,-3.61236,-10 0/0:37.2366:10:10:349:0:0:0,-3.0103,-10 0/0:31.216:8:8:287:0:0:0,-2.40824,-10 0/0:67.3396:20:20:743:0:0:0,-6.0206,-10 0/0:88.411:28:27:957:0:0:0,-8.12781,-10 0/0:58.3087:17:17:602:0:0:0,-5.11751,-10 scaffold_56 623091 . C T 17063.7 . AB=0.460102;ABP=11.1542;AC=52;AF=0.285714;AN=182;AO=597;CIGAR=1X;DP=2328;DPB=2328;DPRA=1.01996;EPP=3.82869;EPPR=4.63702;GTI=1;LEN=1;MEANALT=1;MQM=59.8224;MQMR=59.9566;NS=91;NUMALT=1;ODDS=0.930982;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=22055;QR=63564;RO=1730;RPP=1290.71;RPPR=3733.65;RUN=1;SAF=305;SAP=3.625;SAR=292;SRF=880;SRP=4.13997;SRR=850;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.7444:25:24:877:1:36:0,-2.52781,-10 0/0:70.0466:19:19:691:0:0:0,-5.71957,-10 0/1:99:21:7:264:14:531:-10,0,-10 1/1:38.0367:19:0:0:19:721:-10,-5.71957,0 0/0:70.0466:19:19:720:0:0:0,-5.71957,-10 1/1:16.9646:12:0:0:12:443:-10,-3.61236,0 1/1:77.1706:32:0:0:32:1202:-10,-9.63296,0 1/1:59.1088:26:0:0:26:987:-10,-7.82678,0 1/1:25.9955:15:0:0:15:546:-10,-4.51545,0 0/0:18.8716:2:2:76:0:0:0,-0.60206,-7.22 0/0:58.0055:15:15:538:0:0:0,-4.51545,-10 0/0:42.954:10:10:364:0:0:0,-3.0103,-10 0/1:99:35:22:814:13:471:-10,0,-10 0/0:99:45:45:1615:0:0:0,-10,-10 0/1:99:43:21:784:22:832:-10,0,-10 0/0:83.1651:37:36:1316:1:28:0,-6.76991,-10 0/1:99:31:14:510:17:586:-10,0,-10 0/0:45.9643:11:11:408:0:0:0,-3.31133,-10 0/0:88.1084:25:25:878:0:0:0,-7.52575,-10 0/0:67.3861:35:34:1254:1:38:0,-5.19198,-10 0/0:91.1174:26:26:982:0:0:0,-7.82678,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 1/1:7.93367:9:0:0:9:341:-10,-2.70927,0 0/1:99:27:13:489:14:529:-10,0,-10 1/1:41.047:20:0:0:20:727:-10,-6.0206,0 0/0:99:41:41:1530:0:0:0,-10,-10 0/0:76.0672:21:21:772:0:0:0,-6.32163,-10 0/0:51.9849:14:13:469:0:0:0,-3.91339,-10 0/0:97.1389:28:28:1008:0:0:0,-8.42884,-10 0/0:99:52:52:1925:0:0:0,-10,-10 0/1:9.27109:11:10:358:1:38:-1.53006,0,-10 0/0:51.9849:13:13:486:0:0:0,-3.91339,-10 0/0:85.0978:24:24:902:0:0:0,-7.22472,-10 1/1:13.9543:11:0:0:11:411:-10,-3.31133,0 0/0:79.0775:22:22:808:0:0:0,-6.62266,-10 1/1:13.9543:11:0:0:11:409:-10,-3.31133,0 1/1:10.944:10:0:0:10:347:-10,-3.0103,0 0/0:99:37:37:1351:0:0:0,-10,-10 0/0:76.0672:21:21:766:0:0:0,-6.32163,-10 0/1:99:17:10:377:7:266:-10,0,-10 0/0:99:40:40:1498:0:0:0,-10,-10 0/0:99:37:37:1314:0:0:0,-10,-10 1/1:62.1191:27:0:0:27:957:-10,-8.12781,0 0/1:99:34:19:688:15:568:-10,0,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:85.0978:24:24:885:0:0:0,-7.22472,-10 0/0:99:54:54:1985:0:0:0,-10,-10 0/1:99:35:16:601:19:685:-10,0,-10 1/1:41.047:20:0:0:20:755:-10,-6.0206,0 0/1:99:58:36:1270:22:809:-10,0,-10 0/0:54.9952:14:14:507:0:0:0,-4.21442,-10 0/1:99:49:26:982:23:866:-10,0,-10 0/0:54.9952:14:14:521:0:0:0,-4.21442,-10 0/0:54.9952:14:14:517:0:0:0,-4.21442,-10 0/1:99:34:15:557:19:692:-10,0,-10 0/0:48.9746:12:12:444:0:0:0,-3.61236,-10 0/1:99:28:16:580:12:445:-10,0,-10 0/0:70.0466:19:19:704:0:0:0,-5.71957,-10 0/0:91.1174:26:26:975:0:0:0,-7.82678,-10 0/0:67.0364:18:18:649:0:0:0,-5.41854,-10 0/1:99:36:16:575:20:733:-10,0,-10 0/0:91.1174:26:26:933:0:0:0,-7.82678,-10 0/0:99:40:40:1499:0:0:0,-10,-10 0/1:99:25:19:705:6:227:-10,0,-10 0/0:51.9849:13:13:483:0:0:0,-3.91339,-10 0/0:99:42:42:1562:0:0:0,-10,-10 1/1:65.1294:28:0:0:28:1061:-10,-8.42884,0 0/0:61.0158:16:16:560:0:0:0,-4.81648,-10 0/0:99:40:40:1493:0:0:0,-10,-10 0/0:73.057:20:20:734:0:0:0,-6.0206,-10 .:.:.:.:.:.:.:. 0/0:99:35:35:1250:0:0:0,-10,-10 0/0:91.1174:26:26:943:0:0:0,-7.82678,-10 0/0:85.0978:24:24:900:0:0:0,-7.22472,-10 0/0:99:45:45:1648:0:0:0,-10,-10 0/0:76.0672:21:21:794:0:0:0,-6.32163,-10 0/0:82.0877:23:23:863:0:0:0,-6.92369,-10 0/0:76.0672:21:21:781:0:0:0,-6.32163,-10 0/1:0.339619:6:0:0:6:221:-10,-1.80618,0 0/0:58.0055:15:15:542:0:0:0,-4.51545,-10 1/1:99:50:0:0:50:1846:-10,-10,0 0/1:99:30:20:705:10:348:-10,0,-10 0/1:99:33:21:773:12:455:-10,0,-10 0/1:99:28:13:492:15:548:-10,0,-10 0/0:99:36:36:1310:0:0:0,-10,-10 1/1:13.9543:11:0:0:11:411:-10,-3.31133,0 0/0:76.0672:21:21:789:0:0:0,-6.32163,-10 1/1:47.0676:22:0:0:22:789:-10,-6.62266,0 0/1:99:8:4:152:4:150:-10,0,-10 0/0:79.0775:22:22:829:0:0:0,-6.62266,-10 0/0:99:34:34:1277:0:0:0,-10,-10 0/0:70.0466:19:19:654:0:0:0,-5.71957,-10 scaffold_56 627323 . C T 27061 . AB=0.474016;ABP=6.73429;AC=86;AF=0.467391;AN=184;AO=949;CIGAR=1X;DP=2025;DPB=2025;DPRA=1.2706;EPP=4.67838;EPPR=20.1233;GTI=2;LEN=1;MEANALT=1.03636;MQM=59.9768;MQMR=59.9283;NS=92;NUMALT=1;ODDS=0.0252865;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=34343;QR=38831;RO=1074;RPP=2020.54;RPPR=2198.27;RUN=1;SAF=466;SAP=3.67158;SAR=483;SRF=505;SRP=11.2918;SRR=569;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.477:14:14:508:0:0:0,-4.21442,-10 0/0:35.4564:12:12:440:0:0:0,-3.61236,-10 0/0:56.5285:19:19:697:0:0:0,-5.71957,-10 1/1:57.8979:20:0:0:20:730:-10,-6.0206,0 0/0:29.4358:10:10:380:0:0:0,-3.0103,-10 1/1:51.8773:18:0:0:18:668:-10,-5.41854,0 0/0:99:41:41:1465:0:0:0,-10,-10 1/1:72.9494:25:0:0:25:920:-10,-7.52575,0 0/0:56.5285:19:19:699:0:0:0,-5.71957,-10 1/1:6.72278:3:0:0:3:114:-10,-0.90309,0 0/0:38.4667:13:13:466:0:0:0,-3.91339,-10 0/0:23.4152:8:8:302:0:0:0,-2.40824,-10 0/1:99:32:18:684:14:516:-10,0,-10 0/1:99:38:21:774:16:586:-10,0,-10 0/1:99:19:6:228:13:472:-10,0,-10 0/0:86.6312:29:29:942:0:0:0,-8.72987,-10 0/1:99:23:15:567:8:278:-10,0,-10 0/0:38.4667:13:13:483:0:0:0,-3.91339,-10 0/1:99:27:15:526:12:443:-10,0,-10 0/0:98.6682:33:33:1229:0:0:0,-9.93399,-10 0/0:44.4873:15:15:539:0:0:0,-4.51545,-10 0/0:99:39:39:1438:0:0:0,-10,-10 1/1:21.7743:8:0:0:8:300:-10,-2.40824,0 0/1:99:32:12:455:20:632:-10,0,-10 1/1:66.9288:23:0:0:23:871:-10,-6.92369,0 1/1:99:45:0:0:45:1653:-10,-10,0 0/0:62.5491:21:21:757:0:0:0,-6.32163,-10 0/0:53.5182:18:18:680:0:0:0,-5.41854,-10 0/1:0.341222:18:1:38:17:594:-10,-0.363267,0 0/1:99:41:22:782:19:717:-10,0,-10 1/1:21.7743:8:0:0:8:300:-10,-2.40824,0 1/1:9.73308:4:0:0:4:152:-10,-1.20412,0 1/1:69.9391:24:0:0:24:871:-10,-7.22472,0 0/0:47.4976:16:16:592:0:0:0,-4.81648,-10 0/0:68.5697:23:23:828:0:0:0,-6.92369,-10 1/1:30.8052:11:0:0:11:395:-10,-3.31133,0 0/0:47.4976:16:16:554:0:0:0,-4.81648,-10 0/0:99:39:39:1395:0:0:0,-10,-10 0/1:0.380468:17:16:573:1:37:0,-0.187061,-10 1/1:33.8155:12:0:0:12:410:-10,-3.61236,0 1/1:99:44:0:0:44:1618:-10,-10,0 0/1:93.8268:31:27:960:4:151:-9.1334,0,-10 1/1:60.9082:21:0:0:21:706:-10,-6.32163,0 0/1:99:31:19:709:12:456:-10,0,-10 1/1:63.9185:22:0:0:22:816:-10,-6.62266,0 1/1:66.9288:23:0:0:23:868:-10,-6.92369,0 1/1:99:44:0:0:44:1604:-10,-10,0 0/1:99:31:15:563:16:584:-10,0,-10 0/0:29.4358:10:10:331:0:0:0,-3.0103,-10 0/1:99:47:20:633:27:908:-10,0,-10 0/0:23.4152:8:8:300:0:0:0,-2.40824,-10 1/1:61.7829:38:1:38:37:1345:-10,-6.05936,0 0/0:50.5079:17:17:584:0:0:0,-5.11751,-10 1/1:6.72278:3:0:0:3:85:-7.93333,-0.90309,0 1/1:97.0287:33:0:0:33:1176:-10,-9.93399,0 1/1:60.9082:21:0:0:21:752:-10,-6.32163,0 0/1:99:12:7:230:5:188:-10,0,-10 0/0:26.4255:9:9:314:0:0:0,-2.70927,-10 0/0:50.5079:17:17:617:0:0:0,-5.11751,-10 0/0:44.4873:15:15:515:0:0:0,-4.51545,-10 0/0:99:36:36:1306:0:0:0,-10,-10 1/1:88.0005:30:0:0:30:1038:-10,-9.0309,0 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:41.477:14:14:521:0:0:0,-4.21442,-10 0/0:32.4461:11:11:373:0:0:0,-3.31133,-10 0/0:93.3773:41:40:1454:1:16:0,-9.12945,-10 0/1:99:19:11:386:8:301:-10,0,-10 0/0:50.5079:17:17:638:0:0:0,-5.11751,-10 0/1:99:39:17:608:21:707:-10,0,-10 1/1:48.867:17:0:0:17:620:-10,-5.11751,0 1/1:51.8773:18:0:0:18:682:-10,-5.41854,0 1/1:69.9391:24:0:0:24:858:-10,-7.22472,0 1/1:48.867:17:0:0:17:641:-10,-5.11751,0 1/1:45.8567:16:0:0:16:600:-10,-4.81648,0 1/1:99:40:0:0:40:1461:-10,-10,0 0/0:47.4976:16:16:593:0:0:0,-4.81648,-10 0/0:38.4667:13:13:492:0:0:0,-3.91339,-10 1/1:24.7846:9:0:0:9:329:-10,-2.70927,0 1/1:12.7434:5:0:0:5:187:-10,-1.50515,0 0/0:35.4564:12:12:414:0:0:0,-3.61236,-10 0/1:99:50:27:953:23:838:-10,0,-10 0/1:99:37:14:532:23:817:-10,0,-10 0/1:99:31:18:659:13:490:-10,0,-10 0/1:99:26:15:568:11:387:-10,0,-10 0/1:99:26:13:468:13:492:-10,0,-10 1/1:24.7846:9:0:0:9:338:-10,-2.70927,0 0/0:71.58:24:24:893:0:0:0,-7.22472,-10 1/1:36.8258:13:0:0:13:457:-10,-3.91339,0 0/1:85.7392:8:3:92:5:168:-10,0,-7.92661 0/0:32.4461:11:11:408:0:0:0,-3.31133,-10 0/0:59.5388:20:20:720:0:0:0,-6.0206,-10 0/0:53.5182:18:18:644:0:0:0,-5.41854,-10 scaffold_56 630931 . G A 147.398 . AB=0.466667;ABP=3.15506;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1X;DP=1349;DPB=1349;DPRA=1.02324;EPP=3.32051;EPPR=3.05078;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.994;NS=92;NUMALT=1;ODDS=9.09719;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=260;QR=48784;RO=1341;RPP=18.2106;RPPR=2914.95;RUN=1;SAF=3;SAP=3.32051;SAR=4;SRF=668;SRP=3.05078;SRR=673;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.644:14:14:519:0:0:0,-4.21442,-10 0/0:84.6646:16:16:594:0:0:0,-4.81648,-10 0/0:69.6131:11:11:394:0:0:0,-3.31133,-10 0/0:57.5719:7:7:266:0:0:0,-2.10721,-10 0/0:57.5719:7:7:255:0:0:0,-2.10721,-10 0/0:42.5204:2:2:63:0:0:0,-0.60206,-5.985 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:96.7027:20:20:736:0:0:0,-6.0206,-10 0/0:54.5616:6:6:226:0:0:0,-1.80618,-10 0/0:39.5101:1:1:38:0:0:0,-0.30103,-3.8 0/0:48.541:4:4:127:0:0:0,-1.20412,-10 0/0:51.5513:5:5:190:0:0:0,-1.50515,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:81.6543:15:15:554:0:0:0,-4.51545,-10 0/0:93.694:19:19:670:0:0:0,-5.71957,-10 0/0:78.644:14:14:527:0:0:0,-4.21442,-10 0/0:63.5925:9:9:329:0:0:0,-2.70927,-10 0/0:78.644:14:14:507:0:0:0,-4.21442,-10 0/0:99:33:33:1182:0:0:0,-9.93399,-10 0/0:90.685:18:18:667:0:0:0,-5.41854,-10 0/0:99:26:26:969:0:0:0,-7.82678,-10 0/0:81.6543:15:15:546:0:0:0,-4.51545,-10 0/0:87.6748:17:17:636:0:0:0,-5.11751,-10 0/0:84.6646:16:16:585:0:0:0,-4.81648,-10 0/0:99:23:23:819:0:0:0,-6.92369,-10 0/0:66.6028:10:10:356:0:0:0,-3.0103,-10 0/0:60.5822:8:8:300:0:0:0,-2.40824,-10 0/0:72.6234:12:12:453:0:0:0,-3.61236,-10 0/0:99:25:25:870:0:0:0,-7.52575,-10 0/0:54.5616:6:6:212:0:0:0,-1.80618,-10 0/0:45.5307:3:3:113:0:0:0,-0.90309,-10 0/0:87.6748:17:17:610:0:0:0,-5.11751,-10 0/0:51.5513:5:5:190:0:0:0,-1.50515,-10 0/0:81.6543:15:15:528:0:0:0,-4.51545,-10 0/0:54.5616:6:6:214:0:0:0,-1.80618,-10 0/0:81.6543:15:15:522:0:0:0,-4.51545,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:72.6234:12:12:456:0:0:0,-3.61236,-10 0/0:69.6131:11:11:371:0:0:0,-3.31133,-10 0/0:99:22:22:814:0:0:0,-6.62266,-10 0/0:90.685:18:18:671:0:0:0,-5.41854,-10 0/0:87.6748:17:17:629:0:0:0,-5.11751,-10 0/0:99:36:36:1297:0:0:0,-10,-10 0/0:99:21:21:744:0:0:0,-6.32163,-10 0/0:72.6234:12:12:447:0:0:0,-3.61236,-10 0/0:99:30:30:1092:0:0:0,-9.0309,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:69.6131:11:11:395:0:0:0,-3.31133,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/0:60.5822:8:8:304:0:0:0,-2.40824,-10 0/0:87.6748:17:17:616:0:0:0,-5.11751,-10 0/0:66.6028:10:10:348:0:0:0,-3.0103,-10 0/0:54.5616:6:6:219:0:0:0,-1.80618,-10 0/0:99:28:28:1036:0:0:0,-8.42884,-10 0/0:54.5616:6:6:218:0:0:0,-1.80618,-10 0/0:72.6234:12:12:432:0:0:0,-3.61236,-10 0/0:51.5513:5:5:189:0:0:0,-1.50515,-10 0/0:69.6131:11:11:355:0:0:0,-3.31133,-10 0/0:54.5616:6:6:208:0:0:0,-1.80618,-10 0/0:99:22:22:776:0:0:0,-6.62266,-10 0/0:93.694:19:19:702:0:0:0,-5.71957,-10 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:90.685:18:18:650:0:0:0,-5.41854,-10 0/0:66.6028:10:10:341:0:0:0,-3.0103,-10 0/0:78.644:14:14:512:0:0:0,-4.21442,-10 0/0:66.6028:10:10:378:0:0:0,-3.0103,-10 0/0:78.644:14:14:459:0:0:0,-4.21442,-10 0/0:99:22:22:801:0:0:0,-6.62266,-10 0/0:63.5925:9:9:316:0:0:0,-2.70927,-10 0/0:87.6748:18:17:619:0:0:0,-5.11751,-10 0/1:99:15:8:274:7:260:-10,0,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:75.6337:13:13:485:0:0:0,-3.91339,-10 0/0:99:22:22:794:0:0:0,-6.62266,-10 0/0:72.6234:12:12:444:0:0:0,-3.61236,-10 0/0:54.5616:6:6:202:0:0:0,-1.80618,-10 0/0:57.5719:7:7:262:0:0:0,-2.10721,-10 0/0:45.5307:3:3:113:0:0:0,-0.90309,-10 0/0:69.6131:11:11:413:0:0:0,-3.31133,-10 0/0:99:23:23:808:0:0:0,-6.92369,-10 0/0:99:24:24:896:0:0:0,-7.22472,-10 0/0:99:21:21:795:0:0:0,-6.32163,-10 0/0:75.6337:13:13:489:0:0:0,-3.91339,-10 0/0:96.7027:20:20:738:0:0:0,-6.0206,-10 0/0:48.541:4:4:129:0:0:0,-1.20412,-10 0/0:69.6131:11:11:389:0:0:0,-3.31133,-10 0/0:45.5307:3:3:114:0:0:0,-0.90309,-10 0/0:48.541:4:4:152:0:0:0,-1.20412,-10 0/0:93.694:19:19:704:0:0:0,-5.71957,-10 0/0:87.6748:17:17:623:0:0:0,-5.11751,-10 0/0:57.5719:7:7:242:0:0:0,-2.10721,-10 scaffold_56 644857 . GTGTC G 218.17 . AB=0.52381;ABP=3.1137;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1M4D1M;DP=1430;DPB=1425.17;DPRA=1.35628;EPP=7.94546;EPPR=3.89989;GTI=0;LEN=4;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=7.37392;PAIRED=0;PAIREDR=0;PAO=1;PQA=0;PQR=182;PRO=6;QA=369;QR=51335;RO=1406;RPP=26.8965;RPPR=3038.75;RUN=1;SAF=8;SAP=7.94546;SAR=3;SRF=717;SRP=4.22114;SRR=689;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:71.1669:15:15:543:0:0:0,-4.51545,-10 0|0:56.1154:10:10:370:0:0:0,-3.0103,-10 0|0:59.1257:11:11:411:0:0:0,-3.31133,-10 0|0:32.033:2:2:76:0:0:0,-0.60206,-7.22 0|0:41.0639:5:5:165:0:0:0,-1.50515,-10 0|0:41.0639:5:5:189:0:0:0,-1.50515,-10 0|0:62.136:12:12:439:0:0:0,-3.61236,-10 0|0:59.1257:12:11:380:0:0:0,-3.31133,-10 0|0:62.136:13:12:437:0:0:0,-3.61236,-10 0|0:44.0742:6:6:214:0:0:0,-1.80618,-10 0|0:47.0845:7:7:241:0:0:0,-2.10721,-10 0|0:38.0536:4:4:150:0:0:0,-1.20412,-10 0|0:77.1875:17:17:627:0:0:0,-5.11751,-10 0|0:80.1977:18:18:677:0:0:0,-5.41854,-10 0|0:86.2183:20:20:719:0:0:0,-6.0206,-10 0|0:77.1875:17:17:627:0:0:0,-5.11751,-10 0|0:65.1463:13:13:478:0:0:0,-3.91339,-10 0|0:44.0742:6:6:210:0:0:0,-1.80618,-10 0|0:83.2078:19:19:704:0:0:0,-5.71957,-10 0|0:99:28:28:995:0:0:0,-8.42884,-10 0|0:62.136:12:12:441:0:0:0,-3.61236,-10 0|0:98.2571:24:24:881:0:0:0,-7.22472,-10 0|0:47.0845:7:7:259:0:0:0,-2.10721,-10 0|0:77.1875:17:17:635:0:0:0,-5.11751,-10 0|0:65.1463:13:13:452:0:0:0,-3.91339,-10 0|0:92.2384:22:22:799:0:0:0,-6.62266,-10 0|0:68.1566:14:14:516:0:0:0,-4.21442,-10 0|0:44.0742:6:6:201:0:0:0,-1.80618,-10 0|0:80.1977:18:18:666:0:0:0,-5.41854,-10 0|0:99:27:27:982:0:0:0,-8.12781,-10 0|0:53.1051:9:9:301:0:0:0,-2.70927,-10 0|0:44.0742:6:6:225:0:0:0,-1.80618,-10 0|0:56.1154:10:10:373:0:0:0,-3.0103,-10 0|0:56.1154:10:10:356:0:0:0,-3.0103,-10 0|0:65.1463:13:13:459:0:0:0,-3.91339,-10 0|0:41.0639:5:5:187:0:0:0,-1.50515,-10 0|0:53.1051:9:9:328:0:0:0,-2.70927,-10 0|0:99:28:27:972:0:0:0,-8.12781,-10 0|0:86.2183:20:20:734:0:0:0,-6.0206,-10 0|0:68.1566:14:14:527:0:0:0,-4.21442,-10 0|0:98.2571:24:24:896:0:0:0,-7.22472,-10 0|0:56.1154:10:10:359:0:0:0,-3.0103,-10 0|0:71.1669:15:15:555:0:0:0,-4.51545,-10 0|0:99:26:26:953:0:0:0,-7.82678,-10 0|0:99:30:30:1095:0:0:0,-9.0309,-10 0|0:53.1051:10:9:323:0:0:0,-2.70927,-10 0|0:99:39:39:1407:0:0:0,-10,-10 0|0:99:27:27:1006:0:0:0,-8.12781,-10 0|0:56.1154:10:10:378:0:0:0,-3.0103,-10 0|0:99:26:26:950:0:0:0,-7.82678,-10 0|0:59.1257:11:11:405:0:0:0,-3.31133,-10 0|0:99:27:27:1005:0:0:0,-8.12781,-10 0|0:56.1154:10:10:357:0:0:0,-3.0103,-10 0|0:56.1154:10:10:373:0:0:0,-3.0103,-10 0|0:99:44:44:1606:0:0:0,-10,-10 0|0:80.1977:19:18:664:0:0:0,-5.41854,-10 0|0:74.1772:16:16:592:0:0:0,-4.81648,-10 0|0:38.0536:4:4:150:0:0:0,-1.20412,-10 0|0:65.1463:13:13:479:0:0:0,-3.91339,-10 0|0:59.1257:13:11:395:0:0:0,-3.31133,-10 0|0:80.1977:18:18:656:0:0:0,-5.41854,-10 0|0:80.1977:18:18:672:0:0:0,-5.41854,-10 0|0:99:31:31:1129:0:0:0,-9.33193,-10 0|0:77.1875:17:17:614:0:0:0,-5.11751,-10 0|0:77.1875:17:17:629:0:0:0,-5.11751,-10 0|0:86.2183:20:20:731:0:0:0,-6.0206,-10 0|0:68.1566:14:14:504:0:0:0,-4.21442,-10 0|0:47.0845:7:7:250:0:0:0,-2.10721,-10 0|0:99:25:25:911:0:0:0,-7.52575,-10 0|0:83.2078:19:19:697:0:0:0,-5.71957,-10 0|0:89.2284:22:21:756:0:0:0,-6.32163,-10 0|0:98.2571:24:24:879:0:0:0,-7.22472,-10 0|0:83.2078:20:19:678:0:0:0,-5.71957,-10 0|0:95.2481:24:23:849:0:0:0,-6.92369,-10 0|1:99:21:10:364:11:369:-10,0,-10 0|0:68.1566:14:14:510:0:0:0,-4.21442,-10 0|0:56.1154:10:10:357:0:0:0,-3.0103,-10 0|0:62.136:12:12:444:0:0:0,-3.61236,-10 0|0:44.0742:6:6:219:0:0:0,-1.80618,-10 0|0:62.136:12:12:429:0:0:0,-3.61236,-10 0|0:68.1566:15:14:516:0:0:0,-4.21442,-10 0|0:86.2183:21:20:736:0:0:0,-6.0206,-10 0|0:98.2571:24:24:853:0:0:0,-7.22472,-10 0|0:89.2284:21:21:778:0:0:0,-6.32163,-10 0|0:92.2384:22:22:826:0:0:0,-6.62266,-10 0|0:35.0433:3:3:108:0:0:0,-0.90309,-10 0|0:53.1051:9:9:306:0:0:0,-2.70927,-10 0|0:68.1566:14:14:520:0:0:0,-4.21442,-10 0|0:38.0536:4:4:150:0:0:0,-1.20412,-10 0|0:50.0948:9:8:293:0:0:0,-2.40824,-10 0|0:59.1257:11:11:409:0:0:0,-3.31133,-10 0|0:80.1977:18:18:668:0:0:0,-5.41854,-10 scaffold_56 644892 . G A 5889.89 . AB=0.491736;ABP=3.15387;AC=21;AF=0.11413;AN=184;AO=213;CIGAR=1X;DP=1440;DPB=1440;DPRA=1.44565;EPP=3.10205;EPPR=5.99009;GTI=1;LEN=1;MEANALT=1.0625;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=2.74355;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7910;QR=44593;RO=1225;RPP=465.534;RPPR=2542.85;RUN=1;SAF=108;SAP=3.10205;SAR=105;SRF=623;SRP=3.79203;SRR=602;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.2468:17:17:605:0:0:0,-5.11751,-10 1/1:16.3904:10:0:0:10:366:-10,-3.0103,0 0/0:37.185:11:11:415:0:0:0,-3.31133,-10 0/1:0.0414492:2:0:0:2:75:-7.125,-0.60206,0 0/0:19.1232:5:5:183:0:0:0,-1.50515,-10 0/0:19.1232:5:5:188:0:0:0,-1.50515,-10 0/0:40.1953:12:12:454:0:0:0,-3.61236,-10 0/0:40.1953:12:12:369:0:0:0,-3.61236,-10 0/0:43.2056:13:13:454:0:0:0,-3.91339,-10 0/0:22.1335:6:6:220:0:0:0,-1.80618,-10 0/0:25.1438:7:7:261:0:0:0,-2.10721,-10 0/0:16.1129:4:4:152:0:0:0,-1.20412,-10 0/0:55.2468:17:17:619:0:0:0,-5.11751,-10 0/0:58.2571:18:18:669:0:0:0,-5.41854,-10 0/0:64.2777:20:20:737:0:0:0,-6.0206,-10 0/0:58.2571:18:18:636:0:0:0,-5.41854,-10 0/0:43.2056:13:13:470:0:0:0,-3.91339,-10 0/0:22.1335:6:6:218:0:0:0,-1.80618,-10 0/0:61.2674:19:19:717:0:0:0,-5.71957,-10 0/0:91.3708:29:29:1054:0:0:0,-8.72987,-10 0/0:40.1953:12:12:427:0:0:0,-3.61236,-10 0/0:79.3291:25:25:914:0:0:0,-7.52575,-10 0/0:25.1438:7:7:244:0:0:0,-2.10721,-10 0/1:99:17:9:330:8:303:-10,0,-10 0/0:43.2056:13:13:451:0:0:0,-3.91339,-10 0/1:99:22:12:453:10:378:-10,0,-10 0/0:46.2159:14:14:531:0:0:0,-4.21442,-10 0/0:22.1335:6:6:193:0:0:0,-1.80618,-10 1/1:40.4728:18:0:0:18:640:-10,-5.41854,0 0/0:79.3291:25:25:912:0:0:0,-7.52575,-10 0/0:28.1541:9:8:265:0:0:0,-2.40824,-10 0/0:22.1335:6:6:228:0:0:0,-1.80618,-10 0/0:34.1747:10:10:380:0:0:0,-3.0103,-10 0/0:34.1747:10:10:344:0:0:0,-3.0103,-10 0/0:43.2056:13:13:462:0:0:0,-3.91339,-10 0/0:19.1232:5:5:189:0:0:0,-1.50515,-10 0/0:31.1644:9:9:339:0:0:0,-2.70927,-10 0/0:88.3603:28:28:970:0:0:0,-8.42884,-10 0/0:64.2777:20:20:735:0:0:0,-6.0206,-10 0/0:46.2159:14:14:532:0:0:0,-4.21442,-10 0/1:99:24:12:442:12:450:-10,0,-10 0/0:34.1747:10:10:367:0:0:0,-3.0103,-10 0/0:49.2262:15:15:544:0:0:0,-4.51545,-10 0/0:82.3393:26:26:978:0:0:0,-7.82678,-10 1/1:73.5861:29:0:0:29:1058:-10,-8.72987,0 0/1:99:10:6:184:4:152:-10,0,-10 0/1:99:39:30:1061:9:342:-10,0,-10 0/0:85.3495:27:27:1017:0:0:0,-8.12781,-10 0/0:34.1747:10:10:379:0:0:0,-3.0103,-10 0/0:82.3393:26:26:932:0:0:0,-7.82678,-10 0/0:40.1953:12:12:420:0:0:0,-3.61236,-10 0/0:91.3708:29:29:1068:0:0:0,-8.72987,-10 0/0:34.1747:10:10:357:0:0:0,-3.0103,-10 0/0:34.1747:10:10:373:0:0:0,-3.0103,-10 0/1:99:44:22:818:22:821:-10,0,-10 0/0:61.2674:19:19:684:0:0:0,-5.71957,-10 0/1:99:16:7:236:9:321:-10,0,-10 0/0:16.1129:4:4:152:0:0:0,-1.20412,-10 0/0:43.2056:13:13:470:0:0:0,-3.91339,-10 0/0:46.2159:14:14:524:0:0:0,-4.21442,-10 0/0:55.2468:17:17:622:0:0:0,-5.11751,-10 1/1:40.4728:18:0:0:18:678:-10,-5.41854,0 0/0:97.3927:31:31:1141:0:0:0,-9.33193,-10 0/0:55.2468:17:17:635:0:0:0,-5.11751,-10 0/0:55.2468:17:17:642:0:0:0,-5.11751,-10 0/0:64.2777:20:20:723:0:0:0,-6.0206,-10 0/0:46.2159:14:14:520:0:0:0,-4.21442,-10 0/0:25.1438:7:7:244:0:0:0,-2.10721,-10 0/1:99:25:8:303:16:598:-10,0,-10 1/1:43.4831:19:0:0:19:720:-10,-5.71957,0 0/0:73.3086:23:23:825:0:0:0,-6.92369,-10 0/0:76.3188:24:24:896:0:0:0,-7.22472,-10 0/0:64.2777:20:20:718:0:0:0,-6.0206,-10 0/0:76.3188:24:24:863:0:0:0,-7.22472,-10 0/0:67.288:21:21:722:0:0:0,-6.32163,-10 0/0:46.2159:14:14:506:0:0:0,-4.21442,-10 0/0:37.185:11:11:396:0:0:0,-3.31133,-10 0/0:40.1953:12:12:448:0:0:0,-3.61236,-10 0/0:22.1335:6:6:226:0:0:0,-1.80618,-10 0/0:40.1953:12:12:422:0:0:0,-3.61236,-10 0/0:49.2262:15:15:559:0:0:0,-4.51545,-10 0/0:76.3188:24:24:874:0:0:0,-7.22472,-10 0/0:76.3188:24:24:850:0:0:0,-7.22472,-10 0/1:99:21:7:247:14:522:-10,0,-10 0/1:99:22:9:341:13:486:-10,0,-10 0/0:13.1026:3:3:114:0:0:0,-0.90309,-10 0/0:31.1644:9:9:336:0:0:0,-2.70927,-10 0/0:46.2159:14:14:530:0:0:0,-4.21442,-10 0/0:16.1129:4:4:152:0:0:0,-1.20412,-10 0/0:31.1644:9:9:315:0:0:0,-2.70927,-10 0/0:37.185:11:11:415:0:0:0,-3.31133,-10 0/0:58.2571:18:18:682:0:0:0,-5.41854,-10 scaffold_56 644905 . G A 25932 . AB=0.44665;ABP=12.9732;AC=123;AF=0.668478;AN=184;AO=890;CIGAR=1X;DP=1429;DPB=1429;DPRA=0.978376;EPP=3.48851;EPPR=6.41106;GTI=1;LEN=1;MEANALT=1.01389;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.145689;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=32668;QR=19326;RO=537;RPP=1926.94;RPPR=1169.09;RUN=1;SAF=437;SAP=3.6349;SAR=453;SRF=283;SRP=6.41106;SRR=254;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:49.5894:17:0:0:17:617:-10,-5.11751,0 1/1:25.507:9:0:0:9:318:-10,-2.70927,0 1/1:31.5276:11:0:0:11:415:-10,-3.31133,0 0/1:0.404735:2:0:0:2:76:-7.22,-0.60206,0 0/1:54.9294:5:3:110:2:53:-4.52985,0,-9.76152 1/1:13.4658:5:0:0:5:185:-10,-1.50515,0 1/1:34.5379:12:0:0:12:434:-10,-3.61236,0 1/1:34.5379:12:0:0:12:435:-10,-3.61236,0 1/1:37.5482:13:0:0:13:478:-10,-3.91339,0 0/0:17.997:6:6:227:0:0:0,-1.80618,-10 1/1:19.4864:7:0:0:7:243:-10,-2.10721,0 1/1:10.4555:4:0:0:4:152:-10,-1.20412,0 0/1:99:17:9:340:8:303:-10,0,-10 0/1:99:18:8:304:10:375:-10,0,-10 0/0:60.1412:20:20:734:0:0:0,-6.0206,-10 1/1:52.5997:18:0:0:18:667:-10,-5.41854,0 1/1:34.5379:12:0:0:12:443:-10,-3.61236,0 1/1:16.4761:6:0:0:6:222:-10,-1.80618,0 1/1:55.61:19:0:0:19:709:-10,-5.71957,0 0/1:99:29:14:478:14:525:-10,0,-10 0/1:99:12:8:303:4:152:-10,0,-10 0/0:75.1927:25:25:891:0:0:0,-7.52575,-10 1/1:19.4864:7:0:0:7:263:-10,-2.10721,0 0/1:99:17:9:311:8:295:-10,0,-10 1/1:37.5482:13:0:0:13:465:-10,-3.91339,0 0/1:99:22:12:437:10:352:-10,0,-10 0/0:42.0794:14:14:509:0:0:0,-4.21442,-10 0/0:17.997:6:6:214:0:0:0,-1.80618,-10 1/1:52.5997:18:0:0:18:679:-10,-5.41854,0 0/1:99:25:12:450:13:444:-10,0,-10 1/1:25.507:9:0:0:9:272:-10,-2.70927,0 1/1:16.4761:6:0:0:6:227:-10,-1.80618,0 1/1:28.5173:10:0:0:10:376:-10,-3.0103,0 1/1:28.5173:10:0:0:10:352:-10,-3.0103,0 1/1:37.5482:13:0:0:13:481:-10,-3.91339,0 1/1:13.4658:5:0:0:5:188:-10,-1.50515,0 1/1:25.507:9:0:0:9:342:-10,-2.70927,0 0/1:99:27:18:589:9:320:-10,0,-10 0/0:60.1412:20:20:701:0:0:0,-6.0206,-10 0/1:99:14:8:303:6:228:-10,0,-10 0/1:99:24:12:445:12:452:-10,0,-10 1/1:28.5173:10:0:0:10:357:-10,-3.0103,0 1/1:43.5688:15:0:0:15:567:-10,-4.51545,0 1/1:76.6821:26:0:0:26:967:-10,-7.82678,0 1/1:85.7128:29:0:0:29:1041:-10,-8.72987,0 1/1:28.5173:10:0:0:10:373:-10,-3.0103,0 1/1:99:39:0:0:39:1412:-10,-10,0 0/1:99:27:15:559:12:445:-10,0,-10 0/0:30.0382:10:10:374:0:0:0,-3.0103,-10 0/0:78.2029:26:26:934:0:0:0,-7.82678,-10 0/0:36.0588:12:12:452:0:0:0,-3.61236,-10 0/1:99:29:15:566:14:519:-10,0,-10 1/1:28.5173:10:0:0:10:375:-10,-3.0103,0 1/1:28.5173:10:0:0:10:375:-10,-3.0103,0 1/1:99:41:0:0:41:1538:-10,-10,0 1/1:55.61:19:0:0:19:717:-10,-5.71957,0 0/1:99:16:7:266:9:339:-10,0,-10 1/1:10.4555:4:0:0:4:152:-10,-1.20412,0 0/0:39.0691:13:13:440:0:0:0,-3.91339,-10 1/1:40.5585:14:0:0:14:495:-10,-4.21442,0 1/1:49.5894:17:0:0:17:629:-10,-5.11751,0 1/1:52.5997:18:0:0:18:634:-10,-5.41854,0 0/1:99:31:23:828:8:303:-10,0,-10 1/1:49.5894:17:0:0:17:615:-10,-5.11751,0 0/0:51.1103:17:17:638:0:0:0,-5.11751,-10 0/1:99:20:9:308:11:418:-10,0,-10 0/1:99:14:6:220:8:297:-10,0,-10 0/0:17.997:7:6:222:0:0:0,-1.80618,-10 1/1:70.6615:24:0:0:24:864:-10,-7.22472,0 1/1:49.5894:17:0:0:17:615:-10,-5.11751,0 0/0:69.1721:23:23:778:0:0:0,-6.92369,-10 0/0:72.1824:24:24:833:0:0:0,-7.22472,-10 0/0:60.1412:20:20:679:0:0:0,-6.0206,-10 0/0:69.1721:23:23:872:0:0:0,-6.92369,-10 0/1:99:21:11:403:10:378:-10,0,-10 1/1:40.5585:14:0:0:14:523:-10,-4.21442,0 0/0:33.0485:11:11:385:0:0:0,-3.31133,-10 1/1:34.5379:12:0:0:12:439:-10,-3.61236,0 1/1:16.4761:6:0:0:6:219:-10,-1.80618,0 0/0:36.0588:12:12:429:0:0:0,-3.61236,-10 1/1:43.5688:15:0:0:15:543:-10,-4.51545,0 1/1:67.6512:23:0:0:23:809:-10,-6.92369,0 0/1:99:24:17:604:7:240:-10,0,-10 1/1:61.6306:21:0:0:21:794:-10,-6.32163,0 1/1:64.6409:22:0:0:22:827:-10,-6.62266,0 1/1:7.44523:3:0:0:3:114:-10,-0.90309,0 0/0:27.0279:9:9:326:0:0:0,-2.70927,-10 1/1:40.5585:14:0:0:14:530:-10,-4.21442,0 1/1:10.4555:4:0:0:4:148:-10,-1.20412,0 0/1:99:9:6:203:3:111:-9.57501,0,-10 1/1:31.5276:11:0:0:11:408:-10,-3.31133,0 0/0:54.1206:18:18:661:0:0:0,-5.41854,-10 scaffold_56 644906 . A C 3563.17 . AB=0.547486;ABP=6.5162;AC=15;AF=0.0815217;AN=184;AO=135;CIGAR=1X;DP=1429;DPB=1429;DPRA=1.19362;EPP=3.79846;EPPR=3.75092;GTI=1;LEN=1;MEANALT=1.08333;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.37556;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4909;QR=47416;RO=1293;RPP=296.159;RPPR=2802.04;RUN=1;SAF=64;SAP=3.79846;SAR=71;SRF=656;SRP=3.61657;SRR=637;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.7075:17:17:638:0:0:0,-5.11751,-10 0/0:36.6251:9:9:339:0:0:0,-2.70927,-10 0/0:42.6457:11:11:416:0:0:0,-3.31133,-10 0/0:15.553:2:2:76:0:0:0,-0.60206,-7.22 0/1:77.6334:5:2:62:3:105:-9.29485,0,-5.38485 0/0:24.5839:5:5:186:0:0:0,-1.50515,-10 0/0:45.656:12:12:436:0:0:0,-3.61236,-10 0/0:45.656:12:12:408:0:0:0,-3.61236,-10 0/0:48.6663:13:13:480:0:0:0,-3.91339,-10 0/0:27.5942:6:6:223:0:0:0,-1.80618,-10 0/0:30.6045:7:7:257:0:0:0,-2.10721,-10 0/0:21.5736:4:4:150:0:0:0,-1.20412,-10 0/0:60.7075:17:17:628:0:0:0,-5.11751,-10 0/0:63.7178:18:18:684:0:0:0,-5.41854,-10 0/1:99:20:12:449:8:300:-10,0,-10 0/0:63.7178:18:18:647:0:0:0,-5.41854,-10 0/0:45.656:12:12:451:0:0:0,-3.61236,-10 0/0:27.5942:6:6:225:0:0:0,-1.80618,-10 0/0:66.7281:19:19:698:0:0:0,-5.71957,-10 0/1:99:29:14:508:15:509:-10,0,-10 0/0:45.656:12:12:446:0:0:0,-3.61236,-10 0/1:99:25:12:426:13:486:-10,0,-10 0/0:30.6045:7:7:260:0:0:0,-2.10721,-10 0/0:60.7075:17:17:608:0:0:0,-5.11751,-10 0/0:48.6663:13:13:475:0:0:0,-3.91339,-10 0/0:75.759:22:22:808:0:0:0,-6.62266,-10 0/0:51.6766:14:14:525:0:0:0,-4.21442,-10 0/1:0.175668:6:0:0:6:198:-10,-1.80618,0 0/0:63.7178:18:18:655:0:0:0,-5.41854,-10 0/0:84.7895:25:25:899:0:0:0,-7.52575,-10 0/0:36.6251:9:9:313:0:0:0,-2.70927,-10 0/0:27.5942:6:6:219:0:0:0,-1.80618,-10 0/0:39.6354:10:10:377:0:0:0,-3.0103,-10 0/0:39.6354:10:10:376:0:0:0,-3.0103,-10 0/0:48.6663:13:13:485:0:0:0,-3.91339,-10 0/0:24.5839:5:5:190:0:0:0,-1.50515,-10 0/0:36.6251:9:9:341:0:0:0,-2.70927,-10 0/1:99:27:9:337:18:616:-10,0,-10 0/0:69.7384:20:20:749:0:0:0,-6.0206,-10 0/1:99:14:6:205:8:304:-10,0,-10 0/1:99:24:12:453:12:456:-10,0,-10 0/0:39.6354:10:10:353:0:0:0,-3.0103,-10 0/0:54.6869:15:15:564:0:0:0,-4.51545,-10 0/0:87.8:26:26:948:0:0:0,-7.82678,-10 0/0:96.8297:29:29:1047:0:0:0,-8.72987,-10 0/0:39.6354:10:10:356:0:0:0,-3.0103,-10 0/0:99:39:39:1418:0:0:0,-10,-10 0/0:90.8102:27:27:1000:0:0:0,-8.12781,-10 0/0:39.6354:10:10:380:0:0:0,-3.0103,-10 0/0:87.8:26:26:965:0:0:0,-7.82678,-10 1/1:16.6152:12:0:0:12:443:-10,-3.61236,0 0/1:99:29:14:486:15:559:-10,0,-10 0/0:39.6354:10:10:370:0:0:0,-3.0103,-10 0/0:39.6354:10:10:367:0:0:0,-3.0103,-10 0/0:99:41:41:1532:0:0:0,-10,-10 0/0:66.7281:19:19:703:0:0:0,-5.71957,-10 0/0:57.6972:16:16:602:0:0:0,-4.81648,-10 0/0:21.5736:4:4:152:0:0:0,-1.20412,-10 0/0:48.6663:13:13:482:0:0:0,-3.91339,-10 0/0:51.6766:14:14:489:0:0:0,-4.21442,-10 0/0:60.7075:17:17:610:0:0:0,-5.11751,-10 0/0:63.7178:18:18:670:0:0:0,-5.41854,-10 0/0:99:31:31:1110:0:0:0,-9.33193,-10 0/0:60.7075:17:17:618:0:0:0,-5.11751,-10 1/1:31.6667:17:0:0:17:641:-10,-5.11751,0 0/0:69.7384:20:20:757:0:0:0,-6.0206,-10 0/0:51.6766:14:14:501:0:0:0,-4.21442,-10 0/0:30.6045:7:7:231:0:0:0,-2.10721,-10 0/0:81.7796:24:24:858:0:0:0,-7.22472,-10 0/0:60.7075:17:17:644:0:0:0,-5.11751,-10 0/0:78.7693:23:23:807:0:0:0,-6.92369,-10 0/0:81.7796:24:24:893:0:0:0,-7.22472,-10 0/0:69.7384:20:20:707:0:0:0,-6.0206,-10 0/0:78.7693:23:23:869:0:0:0,-6.92369,-10 0/0:72.7487:21:21:786:0:0:0,-6.32163,-10 0/0:51.6766:14:14:531:0:0:0,-4.21442,-10 0/0:42.6457:11:11:391:0:0:0,-3.31133,-10 0/0:45.656:12:12:433:0:0:0,-3.61236,-10 0/0:27.5942:6:6:227:0:0:0,-1.80618,-10 0/0:45.656:12:12:429:0:0:0,-3.61236,-10 0/0:54.6869:15:15:521:0:0:0,-4.51545,-10 0/0:78.7693:23:23:808:0:0:0,-6.92369,-10 0/0:81.7796:24:24:891:0:0:0,-7.22472,-10 0/0:72.7487:21:21:789:0:0:0,-6.32163,-10 0/0:75.759:22:22:825:0:0:0,-6.62266,-10 0/0:18.5633:3:3:114:0:0:0,-0.90309,-10 1/1:4.57397:9:0:0:8:292:-10,-2.40824,0 0/0:51.6766:14:14:531:0:0:0,-4.21442,-10 0/0:21.5736:4:4:151:0:0:0,-1.20412,-10 0/0:36.6251:9:9:318:0:0:0,-2.70927,-10 0/0:42.6457:11:11:413:0:0:0,-3.31133,-10 0/0:63.7178:18:18:661:0:0:0,-5.41854,-10 scaffold_56 646847 . C T 1599.48 . AB=0.59;ABP=10.0459;AC=4;AF=0.0217391;AN=184;AO=61;CIGAR=1X;DP=2363;DPB=2363;DPRA=0.950812;EPP=3.33068;EPPR=5.27614;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9205;NS=92;NUMALT=1;ODDS=3.90284;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2228;QR=83291;RO=2301;RPP=135.47;RPPR=4999.57;RUN=1;SAF=29;SAP=3.33068;SAR=32;SRF=1175;SRP=5.27614;SRR=1126;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:75.5532:19:19:711:0:0:0,-5.71957,-10 0/0:39.4296:7:7:261:0:0:0,-2.10721,-10 0/1:99:24:10:357:14:503:-10,0,-10 0/0:84.5841:22:22:763:0:0:0,-6.62266,-10 0/0:69.5326:17:17:615:0:0:0,-5.11751,-10 0/0:45.4502:9:9:297:0:0:0,-2.70927,-10 0/0:99:33:33:1242:0:0:0,-9.93399,-10 0/0:99:29:29:1071:0:0:0,-8.72987,-10 0/0:51.4708:11:11:381:0:0:0,-3.31133,-10 0/0:30.3987:4:4:117:0:0:0,-1.20412,-10 0/0:54.4811:12:12:456:0:0:0,-3.61236,-10 0/0:48.4605:10:10:365:0:0:0,-3.0103,-10 0/0:99:45:45:1640:0:0:0,-10,-10 0/0:99:49:49:1811:0:0:0,-10,-10 0/0:78.5635:20:20:752:0:0:0,-6.0206,-10 0/0:90.6045:24:24:840:0:0:0,-7.22472,-10 0/0:99:28:28:1028:0:0:0,-8.42884,-10 0/0:36.4193:6:6:226:0:0:0,-1.80618,-10 0/1:99:25:13:485:12:450:-10,0,-10 0/0:99:39:39:1436:0:0:0,-10,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:99:29:29:1031:0:0:0,-8.72987,-10 0/0:51.4708:11:11:416:0:0:0,-3.31133,-10 0/0:87.5943:23:23:844:0:0:0,-6.92369,-10 0/0:90.6045:24:24:899:0:0:0,-7.22472,-10 0/0:99:39:39:1421:0:0:0,-10,-10 0/0:69.5326:17:17:617:0:0:0,-5.11751,-10 0/0:81.5738:21:21:792:0:0:0,-6.32163,-10 0/0:99:28:28:1003:0:0:0,-8.42884,-10 0/0:99:48:48:1687:0:0:0,-10,-10 0/0:36.4193:6:6:216:0:0:0,-1.80618,-10 0/1:0.045281:13:0:0:13:490:-10,-3.91339,0 0/0:99:27:27:977:0:0:0,-8.12781,-10 0/0:75.5532:19:19:693:0:0:0,-5.71957,-10 0/0:63.512:15:15:533:0:0:0,-4.51545,-10 0/0:42.4399:8:8:273:0:0:0,-2.40824,-10 0/0:60.5017:14:14:492:0:0:0,-4.21442,-10 0/0:99:37:37:1333:0:0:0,-10,-10 0/0:99:30:30:1053:0:0:0,-9.0309,-10 0/0:90.6045:24:24:904:0:0:0,-7.22472,-10 0/0:99:49:49:1754:0:0:0,-10,-10 0/0:99:31:31:1095:0:0:0,-9.33193,-10 0/0:99:34:34:1221:0:0:0,-10,-10 0/0:99:44:44:1577:0:0:0,-10,-10 0/0:99:30:30:1061:0:0:0,-9.0309,-10 0/0:90.6045:24:24:868:0:0:0,-7.22472,-10 0/0:99:44:44:1610:0:0:0,-10,-10 0/0:99:43:43:1473:0:0:0,-10,-10 0/0:75.5532:19:19:692:0:0:0,-5.71957,-10 0/0:99:53:53:1896:0:0:0,-10,-10 0/0:78.5635:20:20:736:0:0:0,-6.0206,-10 0/0:99:62:62:2271:0:0:0,-10,-10 0/0:69.5326:17:17:593:0:0:0,-5.11751,-10 0/0:39.4296:7:7:221:0:0:0,-2.10721,-10 0/0:99:55:55:1964:0:0:0,-10,-10 0/0:84.5841:23:22:808:0:0:0,-6.62266,-10 0/0:99:35:35:1178:0:0:0,-10,-10 0/0:27.3884:3:3:107:0:0:0,-0.90309,-9.98667 0/0:99:27:27:988:0:0:0,-8.12781,-10 0/0:51.4708:11:11:391:0:0:0,-3.31133,-10 0/0:99:34:34:1270:0:0:0,-10,-10 0/0:96.6245:26:26:880:0:0:0,-7.82678,-10 0/0:99:56:56:2098:0:0:0,-10,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/0:66.5223:16:16:604:0:0:0,-4.81648,-10 0/0:99:40:39:1448:1:16:0,-8.83914,-10 0/0:66.5223:16:16:560:0:0:0,-4.81648,-10 0/0:66.5223:16:16:544:0:0:0,-4.81648,-10 0/1:99:38:18:601:20:753:-10,0,-10 0/0:63.512:15:15:567:0:0:0,-4.51545,-10 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:99:40:40:1463:0:0:0,-10,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:99:30:30:1094:0:0:0,-9.0309,-10 0/0:99:53:53:1920:0:0:0,-10,-10 0/0:69.5326:17:17:639:0:0:0,-5.11751,-10 0/0:87.5943:23:23:822:0:0:0,-6.92369,-10 0/0:81.5738:21:21:765:0:0:0,-6.32163,-10 0/0:45.4502:9:9:315:0:0:0,-2.70927,-10 0/0:45.4502:9:9:336:0:0:0,-2.70927,-10 0/0:99:55:55:2012:0:0:0,-10,-10 0/0:99:37:37:1346:0:0:0,-10,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:99:29:29:1048:0:0:0,-8.72987,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:0.0855423:7:6:227:1:16:-0.337888,0,-10 0/0:78.5635:20:20:739:0:0:0,-6.0206,-10 0/0:60.5017:14:14:494:0:0:0,-4.21442,-10 0/0:36.4193:6:6:224:0:0:0,-1.80618,-10 0/0:69.5326:17:17:622:0:0:0,-5.11751,-10 0/0:75.5532:19:19:693:0:0:0,-5.71957,-10 0/0:90.6045:24:24:877:0:0:0,-7.22472,-10 scaffold_56 657989 . G A 5168.75 . AB=0.57971;ABP=14.4341;AC=13;AF=0.0714286;AN=182;AO=189;CIGAR=1X;DP=2119;DPB=2119;DPRA=1.14097;EPP=10.1911;EPPR=8.68495;GTI=1;LEN=1;MEANALT=1;MQM=59.7196;MQMR=59.9072;NS=91;NUMALT=1;ODDS=3.91611;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6979;QR=70371;RO=1929;RPP=413.419;RPPR=4191.78;RUN=1;SAF=82;SAP=10.1911;SAR=107;SRF=929;SRP=8.68495;SRR=1000;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.0138384:28:2:57:26:972:-10,-0.436348,0 0/0:45.4847:13:13:491:0:0:0,-3.91339,-10 0/0:81.6082:25:25:915:0:0:0,-7.52575,-10 0/0:48.495:14:14:532:0:0:0,-4.21442,-10 0/0:72.5774:22:22:779:0:0:0,-6.62266,-10 0/0:36.4538:10:10:373:0:0:0,-3.0103,-10 0/0:99:39:39:1450:0:0:0,-10,-10 0/0:99:39:39:1436:0:0:0,-10,-10 0/0:51.5053:15:15:541:0:0:0,-4.51545,-10 .:.:.:.:.:.:.:. 0/0:33.4435:9:9:338:0:0:0,-2.70927,-10 0/0:42.4744:12:12:451:0:0:0,-3.61236,-10 0/0:99:42:42:1515:0:0:0,-10,-10 0/0:66.5568:20:20:734:0:0:0,-6.0206,-10 0/0:99:38:38:1335:0:0:0,-10,-10 0/0:99:34:34:1232:0:0:0,-10,-10 0/1:99:19:8:300:11:415:-10,0,-10 0/0:36.4538:10:10:370:0:0:0,-3.0103,-10 0/0:99:31:31:1088:0:0:0,-9.33193,-10 0/0:99:37:37:1357:0:0:0,-10,-10 0/1:99:14:6:225:8:278:-10,0,-10 0/0:96.6569:30:30:1023:0:0:0,-9.0309,-10 0/0:42.4744:12:12:444:0:0:0,-3.61236,-10 0/0:72.5774:22:22:835:0:0:0,-6.62266,-10 1/1:74.115:31:0:0:31:1145:-10,-9.33193,0 0/0:99:35:35:1314:0:0:0,-10,-10 0/0:84.6184:26:26:974:0:0:0,-7.82678,-10 0/0:87.6285:28:27:963:0:0:0,-8.12781,-10 0/0:99:31:31:1108:0:0:0,-9.33193,-10 0/0:99:47:47:1696:0:0:0,-10,-10 0/0:18.392:4:4:142:0:0:0,-1.20412,-10 0/0:30.4332:8:8:304:0:0:0,-2.40824,-10 0/0:96.6569:30:30:1081:0:0:0,-9.0309,-10 0/0:27.4229:7:7:255:0:0:0,-2.10721,-10 0/0:60.5362:18:18:655:0:0:0,-5.41854,-10 0/0:30.4332:8:8:304:0:0:0,-2.40824,-10 0/0:27.4229:7:7:244:0:0:0,-2.10721,-10 0/0:72.5774:22:22:823:0:0:0,-6.62266,-10 0/0:93.648:29:29:1001:0:0:0,-8.72987,-10 0/0:81.6082:25:25:907:0:0:0,-7.52575,-10 0/0:99:38:38:1366:0:0:0,-10,-10 0/0:75.5877:23:23:844:0:0:0,-6.92369,-10 0/0:93.648:29:29:1057:0:0:0,-8.72987,-10 0/0:93.648:29:29:1063:0:0:0,-8.72987,-10 0/0:99:31:31:1119:0:0:0,-9.33193,-10 0/0:93.648:29:29:1078:0:0:0,-8.72987,-10 0/0:99:61:61:2224:0:0:0,-10,-10 0/1:99:21:11:389:10:375:-10,0,-10 0/0:57.5259:17:17:638:0:0:0,-5.11751,-10 0/0:87.6285:27:27:1014:0:0:0,-8.12781,-10 0/0:54.5156:16:16:563:0:0:0,-4.81648,-10 0/1:99:50:19:705:31:1150:-10,0,-10 0/0:57.5259:17:17:644:0:0:0,-5.11751,-10 0/0:33.4435:9:9:334:0:0:0,-2.70927,-10 0/0:99:35:35:1289:0:0:0,-10,-10 1/1:31.9708:17:0:0:17:636:-10,-5.11751,0 0/0:81.6082:25:25:896:0:0:0,-7.52575,-10 0/0:30.4332:8:8:300:0:0:0,-2.40824,-10 0/0:21.4023:5:5:190:0:0:0,-1.50515,-10 0/0:66.5568:20:20:749:0:0:0,-6.0206,-10 0/0:99:38:38:1386:0:0:0,-10,-10 0/0:69.5671:21:21:790:0:0:0,-6.32163,-10 0/1:99:52:27:976:25:897:-10,0,-10 0/0:60.5362:18:18:644:0:0:0,-5.41854,-10 0/0:57.5259:17:17:620:0:0:0,-5.11751,-10 0/0:99:37:37:1367:0:0:0,-10,-10 0/0:69.5671:21:21:783:0:0:0,-6.32163,-10 0/0:17.4366:19:18:681:1:38:0,-0.640816,-10 0/0:99:39:39:1406:0:0:0,-10,-10 0/0:24.4126:6:6:228:0:0:0,-1.80618,-10 0/0:78.5979:24:24:883:0:0:0,-7.22472,-10 0/0:87.6285:27:27:1009:0:0:0,-8.12781,-10 0/0:99:33:33:1181:0:0:0,-9.93399,-10 0/0:66.5568:20:20:723:0:0:0,-6.0206,-10 0/0:96.6569:30:30:1085:0:0:0,-9.0309,-10 0/0:42.4744:12:12:445:0:0:0,-3.61236,-10 0/0:66.5568:20:20:721:0:0:0,-6.0206,-10 1/1:37.9914:19:0:0:19:715:-10,-5.71957,0 0/0:39.4641:11:11:416:0:0:0,-3.31133,-10 0/0:51.5053:15:15:515:0:0:0,-4.51545,-10 0/0:99:50:50:1810:0:0:0,-10,-10 0/1:99:23:14:497:9:320:-10,0,-10 0/0:60.5362:18:18:650:0:0:0,-5.41854,-10 0/0:78.5979:24:24:899:0:0:0,-7.22472,-10 0/0:84.6184:26:26:949:0:0:0,-7.82678,-10 0/0:18.392:4:4:150:0:0:0,-1.20412,-10 0/0:63.5465:19:19:700:0:0:0,-5.71957,-10 0/0:36.4538:10:10:379:0:0:0,-3.0103,-10 0/0:18.392:4:4:145:0:0:0,-1.20412,-10 0/0:54.5156:16:16:605:0:0:0,-4.81648,-10 0/0:90.6385:28:28:988:0:0:0,-8.42884,-10 0/0:20.2242:20:19:686:1:38:0,-0.91957,-10 scaffold_56 657992 . G A 775.918 . AB=0.58;ABP=5.78978;AC=1;AF=0.00549451;AN=182;AO=34;CIGAR=1X;DP=2120;DPB=2120;DPRA=1.74925;EPP=4.03217;EPPR=11.8296;GTI=0;LEN=1;MEANALT=1.16667;MQM=59.9706;MQMR=59.8892;NS=91;NUMALT=1;ODDS=0.114241;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1208;QR=75182;RO=2084;RPP=76.8404;RPPR=4528.36;RUN=1;SAF=15;SAP=4.03217;SAR=19;SRF=996;SRP=11.8296;SRR=1088;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:79.6062:28:28:1027:0:0:0,-8.42884,-10 0/0:34.4517:13:13:468:0:0:0,-3.91339,-10 0/0:70.5753:25:25:870:0:0:0,-7.52575,-10 0/0:37.462:14:14:520:0:0:0,-4.21442,-10 0/0:61.5444:22:22:760:0:0:0,-6.62266,-10 0/0:25.4208:10:10:373:0:0:0,-3.0103,-10 0/0:99:39:39:1460:0:0:0,-10,-10 0/0:99:39:39:1419:0:0:0,-10,-10 0/0:40.4723:15:15:511:0:0:0,-4.51545,-10 .:.:.:.:.:.:.:. 0/0:22.4105:9:9:330:0:0:0,-2.70927,-10 0/0:31.4414:12:12:430:0:0:0,-3.61236,-10 0/0:99:42:42:1500:0:0:0,-10,-10 0/0:55.5238:20:20:677:0:0:0,-6.0206,-10 0/0:99:38:38:1300:0:0:0,-10,-10 0/0:48.2435:34:32:1173:1:38:0,-4.88048,-10 0/0:52.5135:19:19:696:0:0:0,-5.71957,-10 0/0:25.4208:10:10:380:0:0:0,-3.0103,-10 0/0:88.6367:31:31:1094:0:0:0,-9.33193,-10 0/0:99:37:37:1337:0:0:0,-10,-10 0/0:37.462:14:14:508:0:0:0,-4.21442,-10 0/0:85.6266:30:30:1058:0:0:0,-9.0309,-10 0/0:31.4414:12:12:441:0:0:0,-3.61236,-10 0/0:61.5444:22:22:795:0:0:0,-6.62266,-10 0/0:88.6367:31:31:1128:0:0:0,-9.33193,-10 0/0:99:35:35:1313:0:0:0,-10,-10 0/0:73.5856:26:26:939:0:0:0,-7.82678,-10 0/0:76.5959:28:27:968:0:0:0,-8.12781,-10 0/0:88.6367:31:31:1070:0:0:0,-9.33193,-10 0/0:99:48:48:1731:0:0:0,-10,-10 0/0:7.35903:4:4:128:0:0:0,-1.20412,-10 0/0:19.4002:8:8:293:0:0:0,-2.40824,-10 0/0:85.6266:30:30:1089:0:0:0,-9.0309,-10 0/0:16.3899:7:7:238:0:0:0,-2.10721,-10 0/0:49.5032:18:18:640:0:0:0,-5.41854,-10 0/0:19.4002:8:8:298:0:0:0,-2.40824,-10 0/0:16.3899:7:7:211:0:0:0,-2.10721,-10 0/0:61.5444:22:22:807:0:0:0,-6.62266,-10 0/0:82.6164:29:29:1033:0:0:0,-8.72987,-10 0/0:70.5753:25:25:910:0:0:0,-7.52575,-10 0/0:99:38:38:1367:0:0:0,-10,-10 0/0:64.5547:23:23:779:0:0:0,-6.92369,-10 0/0:82.6164:29:29:1041:0:0:0,-8.72987,-10 0/0:56.1134:29:28:1039:1:16:0,-5.66747,-10 0/0:88.6367:31:31:1127:0:0:0,-9.33193,-10 0/0:82.6164:29:29:1075:0:0:0,-8.72987,-10 0/0:99:61:61:2202:0:0:0,-10,-10 0/0:58.5341:21:21:746:0:0:0,-6.32163,-10 0/0:46.4929:17:17:641:0:0:0,-5.11751,-10 0/0:76.5959:27:27:1013:0:0:0,-8.12781,-10 0/0:43.4826:16:16:541:0:0:0,-4.81648,-10 0/0:94.9622:50:49:1817:1:38:0,-9.55253,-10 0/0:46.4929:17:17:613:0:0:0,-5.11751,-10 0/0:22.4105:9:9:328:0:0:0,-2.70927,-10 0/0:99:35:35:1248:0:0:0,-10,-10 0/0:46.4929:17:17:633:0:0:0,-5.11751,-10 0/0:70.5753:25:25:901:0:0:0,-7.52575,-10 0/0:19.4002:8:8:281:0:0:0,-2.40824,-10 0/0:10.3693:5:5:190:0:0:0,-1.50515,-10 0/0:55.5238:20:20:751:0:0:0,-6.0206,-10 0/0:99:38:38:1412:0:0:0,-10,-10 0/0:58.5341:21:21:773:0:0:0,-6.32163,-10 0/0:99:52:52:1880:0:0:0,-10,-10 0/0:49.5032:18:18:646:0:0:0,-5.41854,-10 0/0:46.4929:17:17:628:0:0:0,-5.11751,-10 0/0:79.1377:37:36:1318:1:16:0,-7.96991,-10 0/0:58.5341:21:21:747:0:0:0,-6.32163,-10 0/0:52.5135:19:19:715:0:0:0,-5.71957,-10 0/0:99:39:39:1370:0:0:0,-10,-10 0/0:13.3796:6:6:203:0:0:0,-1.80618,-10 0/0:67.565:24:24:888:0:0:0,-7.22472,-10 0/0:76.5959:27:27:987:0:0:0,-8.12781,-10 0/0:67.5935:33:32:1176:1:16:0,-6.81548,-10 0/0:55.5238:20:20:740:0:0:0,-6.0206,-10 0/0:85.6266:30:30:1054:0:0:0,-9.0309,-10 0/0:31.4414:12:12:453:0:0:0,-3.61236,-10 0/0:55.5238:20:20:703:0:0:0,-6.0206,-10 0/0:52.5135:19:19:665:0:0:0,-5.71957,-10 0/0:28.4311:11:11:390:0:0:0,-3.31133,-10 0/0:40.4723:15:15:530:0:0:0,-4.51545,-10 0/1:99:50:21:739:29:1084:-10,0,-10 0/0:64.5547:23:23:803:0:0:0,-6.92369,-10 0/0:49.5032:18:18:669:0:0:0,-5.41854,-10 0/0:67.565:24:24:873:0:0:0,-7.22472,-10 0/0:73.5856:26:26:924:0:0:0,-7.82678,-10 0/0:7.35903:4:4:149:0:0:0,-1.20412,-10 0/0:52.5135:19:19:711:0:0:0,-5.71957,-10 0/0:25.4208:10:10:360:0:0:0,-3.0103,-10 0/0:7.35903:4:4:127:0:0:0,-1.20412,-10 0/0:43.4826:16:16:554:0:0:0,-4.81648,-10 0/0:79.6062:28:28:1032:0:0:0,-8.42884,-10 0/0:55.5238:20:20:707:0:0:0,-6.0206,-10 scaffold_56 732488 . G T 5552.39 . AB=0.554054;ABP=8.64439;AC=22;AF=0.120879;AN=182;AO=211;CIGAR=1X;DP=2016;DPB=2016;DPRA=0.785179;EPP=27.7198;EPPR=17.5751;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9712;NS=91;NUMALT=1;ODDS=0.0683518;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7636;QR=65267;RO=1804;RPP=461.191;RPPR=3920.35;RUN=1;SAF=81;SAP=27.7198;SAR=130;SRF=847;SRP=17.5751;SRR=957;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.9825:9:9:339:0:0:0,-2.70927,-10 0/0:69.0546:16:16:582:0:0:0,-4.81648,-10 0/1:99:15:9:298:6:225:-10,0,-10 0/0:47.9825:9:9:338:0:0:0,-2.70927,-10 0/1:77.8403:7:4:146:3:110:-9.70352,0,-10 0/1:0.866789:11:0:0:11:408:-10,-3.31133,0 0/0:99:57:57:2085:0:0:0,-10,-10 .:.:.:.:.:.:.:. 1/1:20.5831:16:0:0:16:563:-10,-4.81648,0 0/0:38.9516:6:6:203:0:0:0,-1.80618,-10 0/0:26.9104:2:2:76:0:0:0,-0.60206,-7.22 0/0:60.0237:13:13:489:0:0:0,-3.91339,-10 0/0:99:38:38:1311:0:0:0,-10,-10 0/0:99:33:33:1206:0:0:0,-9.93399,-10 0/0:99:30:30:1084:0:0:0,-9.0309,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:75.0752:18:18:625:0:0:0,-5.41854,-10 0/0:54.0031:11:11:393:0:0:0,-3.31133,-10 0/1:99:25:12:442:13:485:-10,0,-10 0/0:99:52:52:1894:0:0:0,-10,-10 0/0:72.0649:17:17:621:0:0:0,-5.11751,-10 0/0:99:43:43:1563:0:0:0,-10,-10 0/0:50.9928:10:10:376:0:0:0,-3.0103,-10 0/0:63.034:14:14:502:0:0:0,-4.21442,-10 0/0:93.1368:24:24:884:0:0:0,-7.22472,-10 0/0:99:36:36:1340:0:0:0,-10,-10 0/0:99:26:26:921:0:0:0,-7.82678,-10 0/0:63.034:14:14:506:0:0:0,-4.21442,-10 0/0:96.1468:25:25:929:0:0:0,-7.52575,-10 0/0:99:35:35:1280:0:0:0,-10,-10 0/0:54.0031:11:11:361:0:0:0,-3.31133,-10 0/0:41.9619:7:7:253:0:0:0,-2.10721,-10 0/0:84.1059:21:21:764:0:0:0,-6.32163,-10 0/1:1.95084:12:0:0:12:439:-10,-3.61236,0 0/0:66.0443:15:15:562:0:0:0,-4.51545,-10 0/0:44.9722:8:8:290:0:0:0,-2.40824,-10 0/0:54.0031:11:11:397:0:0:0,-3.31133,-10 0/0:99:28:28:1016:0:0:0,-8.42884,-10 1/1:26.6037:18:0:0:18:625:-10,-5.41854,0 0/0:47.9825:9:9:325:0:0:0,-2.70927,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:96.1468:25:25:887:0:0:0,-7.52575,-10 0/0:78.0855:19:19:669:0:0:0,-5.71957,-10 0/0:99:26:26:955:0:0:0,-7.82678,-10 0/0:78.0855:19:19:695:0:0:0,-5.71957,-10 0/0:60.0237:13:13:466:0:0:0,-3.91339,-10 0/0:99:49:49:1729:0:0:0,-10,-10 0/1:99:26:14:505:12:456:-10,0,-10 0/0:87.1159:22:22:827:0:0:0,-6.62266,-10 0/0:99:42:42:1538:0:0:0,-10,-10 0/0:84.1059:21:21:792:0:0:0,-6.32163,-10 0/0:99:32:32:1190:0:0:0,-9.63296,-10 1/1:29.614:19:0:0:19:693:-10,-5.71957,0 0/0:41.9619:7:7:266:0:0:0,-2.10721,-10 0/0:99:55:54:1899:0:0:0,-10,-10 0/0:87.1159:22:22:801:0:0:0,-6.62266,-10 0/0:87.1159:22:22:796:0:0:0,-6.62266,-10 0/0:41.9619:7:7:254:0:0:0,-2.10721,-10 0/0:84.1059:21:21:771:0:0:0,-6.32163,-10 0/0:54.0031:11:11:394:0:0:0,-3.31133,-10 0/0:99:45:45:1630:0:0:0,-10,-10 0/0:96.1468:25:25:914:0:0:0,-7.52575,-10 0/0:99:49:49:1817:0:0:0,-10,-10 0/0:48.421:18:17:571:1:14:0,-2.76327,-10 0/0:81.0958:20:20:718:0:0:0,-6.0206,-10 0/0:99:40:40:1421:0:0:0,-10,-10 0/1:99:25:14:520:11:378:-10,0,-10 0/0:29.9207:3:3:114:0:0:0,-0.90309,-10 0/0:99:50:50:1831:0:0:0,-10,-10 0/0:57.0134:12:12:407:0:0:0,-3.61236,-10 0/0:72.0649:17:17:644:0:0:0,-5.11751,-10 0/0:99:27:27:978:0:0:0,-8.12781,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:66.0443:15:15:550:0:0:0,-4.51545,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:75.0752:18:18:659:0:0:0,-5.41854,-10 1/1:23.5934:17:0:0:17:644:-10,-5.11751,0 0/0:81.0958:20:20:704:0:0:0,-6.0206,-10 0/1:0.201024:9:0:0:9:313:-10,-2.70927,0 1/1:23.5934:17:0:0:17:616:-10,-5.11751,0 0/1:99:30:15:561:15:534:-10,0,-10 0/1:99:32:20:708:12:451:-10,0,-10 0/0:99:31:31:1086:0:0:0,-9.33193,-10 0/0:81.0958:20:20:739:0:0:0,-6.0206,-10 0/0:96.1468:25:25:815:0:0:0,-7.52575,-10 0/0:35.9413:5:5:166:0:0:0,-1.50515,-10 0/0:84.1059:21:21:759:0:0:0,-6.32163,-10 0/0:57.0134:12:12:455:0:0:0,-3.61236,-10 0/1:99:7:2:76:5:164:-10,0,-6.43501 0/0:90.1266:23:23:804:0:0:0,-6.92369,-10 0/1:99:23:9:318:14:518:-10,0,-10 0/0:66.0443:15:15:535:0:0:0,-4.51545,-10 scaffold_56 732769 . T G 415.579 . AB=0.653846;ABP=8.35546;AC=1;AF=0.00574713;AN=174;AO=17;CIGAR=1X;DP=1696;DPB=1696;DPRA=1.33892;EPP=3.13803;EPPR=12.1414;GTI=0;LEN=1;MEANALT=1;MQM=58.4118;MQMR=59.8784;NS=87;NUMALT=1;ODDS=4.48944;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=608;QR=60649;RO=1678;RPP=39.9253;RPPR=3603.44;RUN=1;SAF=8;SAP=3.13803;SAR=9;SRF=802;SRP=10.0967;SRR=876;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.7397:14:14:528:0:0:0,-4.21442,-10 0/0:61.75:15:15:540:0:0:0,-4.51545,-10 0/0:82.822:22:22:749:0:0:0,-6.62266,-10 0/0:43.6882:9:9:334:0:0:0,-2.70927,-10 0/0:58.7397:14:14:510:0:0:0,-4.21442,-10 0/0:49.7088:11:11:387:0:0:0,-3.31133,-10 0/0:99:49:49:1763:0:0:0,-10,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:61.75:15:15:506:0:0:0,-4.51545,-10 0/0:25.6264:3:3:114:0:0:0,-0.90309,-10 0/0:22.6161:2:2:75:0:0:0,-0.60206,-7.125 0/0:43.6882:9:9:340:0:0:0,-2.70927,-10 0/0:99:38:38:1369:0:0:0,-10,-10 0/0:99:33:33:1183:0:0:0,-9.93399,-10 0/0:99:34:33:1221:0:0:0,-9.93399,-10 0/0:79.8118:21:21:764:0:0:0,-6.32163,-10 0/0:85.8322:23:23:853:0:0:0,-6.92369,-10 0/0:52.7191:12:12:452:0:0:0,-3.61236,-10 0/0:43.6882:9:9:317:0:0:0,-2.70927,-10 0/0:79.8118:21:21:756:0:0:0,-6.32163,-10 0/0:91.8522:25:25:914:0:0:0,-7.52575,-10 0/0:64.7603:16:16:607:0:0:0,-4.81648,-10 0/0:58.7397:14:14:517:0:0:0,-4.21442,-10 0/0:94.8617:26:26:944:0:0:0,-7.82678,-10 0/0:67.7706:17:17:626:0:0:0,-5.11751,-10 0/0:82.822:22:22:799:0:0:0,-6.62266,-10 0/0:70.7809:18:18:661:0:0:0,-5.41854,-10 0/0:55.7294:13:13:466:0:0:0,-3.91339,-10 0/0:76.8015:20:20:727:0:0:0,-6.0206,-10 0/0:99:41:41:1490:0:0:0,-10,-10 0/0:40.6779:8:8:301:0:0:0,-2.40824,-10 .:.:.:.:.:.:.:. 0/0:67.7706:17:17:621:0:0:0,-5.11751,-10 0/0:76.8015:20:20:745:0:0:0,-6.0206,-10 0/0:58.7397:14:14:493:0:0:0,-4.21442,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:99:31:31:1088:0:0:0,-9.33193,-10 0/0:79.8118:21:21:762:0:0:0,-6.32163,-10 0/0:31.647:5:5:190:0:0:0,-1.50515,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:70.7809:18:18:596:0:0:0,-5.41854,-10 0/0:64.7603:16:16:578:0:0:0,-4.81648,-10 0/0:99:32:32:1128:0:0:0,-9.63296,-10 0/0:58.7397:14:14:474:0:0:0,-4.21442,-10 0/0:52.7191:12:12:446:0:0:0,-3.61236,-10 0/0:99:40:40:1422:0:0:0,-10,-10 0/1:99:26:9:299:17:608:-10,0,-10 0/0:40.6779:8:8:300:0:0:0,-2.40824,-10 0/0:99:42:42:1550:0:0:0,-10,-10 .:.:.:.:.:.:.:. 0/0:61.75:15:15:538:0:0:0,-4.51545,-10 0/0:49.7088:11:11:387:0:0:0,-3.31133,-10 0/0:34.6573:6:6:228:0:0:0,-1.80618,-10 0/0:99:39:39:1451:0:0:0,-10,-10 0/0:46.6985:10:10:375:0:0:0,-3.0103,-10 0/0:73.7912:19:19:684:0:0:0,-5.71957,-10 0/0:31.647:5:5:190:0:0:0,-1.50515,-10 0/0:70.7809:18:18:620:0:0:0,-5.41854,-10 0/0:37.6676:7:7:241:0:0:0,-2.10721,-10 0/0:99:45:45:1643:0:0:0,-10,-10 0/0:73.7912:19:19:693:0:0:0,-5.71957,-10 0/0:99:39:39:1433:0:0:0,-10,-10 0/0:76.8015:20:20:709:0:0:0,-6.0206,-10 0/0:67.7706:17:17:590:0:0:0,-5.11751,-10 0/0:73.7912:19:19:664:0:0:0,-5.71957,-10 0/0:43.6882:9:9:329:0:0:0,-2.70927,-10 0/0:37.6676:7:7:240:0:0:0,-2.10721,-10 0/0:99:38:38:1403:0:0:0,-10,-10 0/0:73.7912:19:19:680:0:0:0,-5.71957,-10 0/0:67.7706:17:17:581:0:0:0,-5.11751,-10 0/0:46.6985:10:10:307:0:0:0,-3.0103,-10 0/0:99:31:31:1087:0:0:0,-9.33193,-10 0/0:52.7191:12:12:456:0:0:0,-3.61236,-10 0/0:99:36:36:1302:0:0:0,-10,-10 0/0:61.75:15:15:559:0:0:0,-4.51545,-10 0/0:64.7603:16:16:568:0:0:0,-4.81648,-10 0/0:70.7809:18:18:666:0:0:0,-5.41854,-10 0/0:40.6779:8:8:301:0:0:0,-2.40824,-10 .:.:.:.:.:.:.:. 0/0:99:35:35:1231:0:0:0,-10,-10 0/0:99:34:34:1251:0:0:0,-10,-10 0/0:73.7912:19:19:698:0:0:0,-5.71957,-10 0/0:94.8617:26:26:937:0:0:0,-7.82678,-10 0/0:91.8522:25:25:898:0:0:0,-7.52575,-10 0/0:25.6264:3:3:114:0:0:0,-0.90309,-10 0/0:91.8522:25:25:941:0:0:0,-7.52575,-10 0/0:61.75:15:15:537:0:0:0,-4.51545,-10 0/0:19.6058:1:1:38:0:0:0,-0.30103,-3.8 0/0:73.7912:19:19:692:0:0:0,-5.71957,-10 0/0:52.7191:12:12:451:0:0:0,-3.61236,-10 0/0:37.6676:7:7:231:0:0:0,-2.10721,-10 scaffold_56 732855 . GCAT G 2752.45 . AB=0.24162;ABP=418.198;AC=15;AF=0.0824176;AN=182;AO=183;CIGAR=1M3D1M;DP=3118;DPB=3008.2;DPRA=1.33047;EPP=400.39;EPPR=5.42726;GTI=4;LEN=3;MEANALT=1.25;MQM=20;MQMR=59.9466;NS=91;NUMALT=1;ODDS=1.52035;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6210;QR=105946;RO=2919;RPP=400.39;RPPR=6194.74;RUN=1;SAF=0;SAP=400.39;SAR=183;SRF=1414;SRP=9.17062;SRR=1505;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:99:50:49:1761:0:0:0,-10,-10 0|0:99:20:20:721:0:0:0,-6.0206,-10 0|0:99:24:24:891:0:0:0,-7.22472,-10 0|0:99:19:19:704:0:0:0,-5.71957,-10 0|0:99:29:29:1078:0:0:0,-8.72987,-10 0|0:72.8894:11:10:355:0:0:0,-3.0103,-10 0|1:99:74:47:1711:26:919:-10,0,-10 0|0:99:66:66:2403:0:0:0,-10,-10 0|0:99:27:27:960:0:0:0,-8.12781,-10 0|0:60.8482:6:6:219:0:0:0,-1.80618,-10 0|1:99:14:6:221:8:230:-10,0,-10 0|0:78.9099:12:12:446:0:0:0,-3.61236,-10 0|1:33.8458:53:46:1620:7:221:-10,0,-10 0|1:99:73:59:2154:14:504:-10,0,-10 0|1:99:51:38:1363:12:446:-10,0,-10 0|0:99:43:43:1558:0:0:0,-10,-10 0|1:99:30:18:665:12:407:-10,0,-10 0|0:78.9099:12:12:432:0:0:0,-3.61236,-10 0|0:81.9202:13:13:492:0:0:0,-3.91339,-10 0|0:99:49:49:1773:0:0:0,-10,-10 0|1:62.596:21:16:592:5:172:-10,0,-10 0|0:99:54:54:1945:0:0:0,-10,-10 0|0:84.9304:14:14:518:0:0:0,-4.21442,-10 0|0:0.000427954:40:37:1360:3:112:-2.40689,0,-10 0|0:99:30:30:1101:0:0:0,-9.0309,-10 0|0:99:62:62:2254:0:0:0,-10,-10 0|0:99:67:67:2470:0:0:0,-10,-10 0|0:99:24:24:856:0:0:0,-7.22472,-10 0|1:99:50:35:1296:15:546:-10,0,-10 0|0:99:97:97:3537:0:0:0,-10,-10 0|0:99:28:28:1011:0:0:0,-8.42884,-10 .:.:.:.:.:.:.:. 0|0:99:19:19:714:0:0:0,-5.71957,-10 0|0:81.9202:13:13:441:0:0:0,-3.91339,-10 0|0:99:20:20:705:0:0:0,-6.0206,-10 0|0:75.8996:11:11:406:0:0:0,-3.31133,-10 0|0:63.8585:7:7:255:0:0:0,-2.10721,-10 0|1:99:50:39:1415:11:354:-10,0,-10 0|0:99:28:28:1016:0:0:0,-8.42884,-10 0|0:99:38:38:1363:0:0:0,-10,-10 0|1:99:54:43:1545:10:314:-10,0,-10 0|0:99:21:21:737:0:0:0,-6.32163,-10 0|0:99:45:45:1592:0:0:0,-10,-10 0|0:99:69:69:2546:0:0:0,-10,-10 0|0:96.9688:18:18:658:0:0:0,-5.41854,-10 0|1:87.8998:36:29:1066:7:238:-10,0,-10 0|1:99:75:58:2116:15:557:-10,0,-10 0|1:44.6421:53:44:1606:9:234:-10,0,-10 0|1:99:25:15:556:10:311:-10,0,-10 0|0:99:79:78:2830:0:0:0,-10,-10 0|0:99:19:19:694:0:0:0,-5.71957,-10 0|0:99:51:50:1766:0:0:0,-10,-10 0|0:99:21:21:743:0:0:0,-6.32163,-10 0|0:0.856405:12:10:371:2:71:-4.95218,0,-10 0|0:99:50:50:1842:0:0:0,-10,-10 0|0:99:35:35:1289:0:0:0,-10,-10 0|0:99:41:40:1432:1:38:0,-6.92945,-10 0|0:72.8894:10:10:344:0:0:0,-3.0103,-10 0|0:99:23:23:845:0:0:0,-6.92369,-10 0|0:81.9202:13:13:471:0:0:0,-3.91339,-10 0|0:99:40:39:1416:0:0:0,-10,-10 0|0:99:33:33:1195:0:0:0,-9.93399,-10 0|0:99:67:66:2378:0:0:0,-10,-10 0|0:99:30:29:1015:0:0:0,-8.72987,-10 0|0:87.9405:15:15:558:0:0:0,-4.51545,-10 0|0:99:59:58:2106:0:0:0,-10,-10 0|0:99:29:29:1023:0:0:0,-8.72987,-10 0|0:90.9504:16:16:565:0:0:0,-4.81648,-10 0|1:99:57:45:1631:12:399:-10,0,-10 0|0:99:20:20:747:0:0:0,-6.0206,-10 0|0:99:23:23:846:0:0:0,-6.92369,-10 0|0:99:29:29:1065:0:0:0,-8.72987,-10 0|0:99:24:24:810:0:0:0,-7.22472,-10 0|0:99:23:23:835:0:0:0,-6.92369,-10 0|0:99:38:38:1364:0:0:0,-10,-10 0|0:84.9304:14:14:510:0:0:0,-4.21442,-10 0|0:93.96:17:17:612:0:0:0,-5.11751,-10 0|0:99:36:36:1286:0:0:0,-10,-10 0|0:78.9099:12:12:443:0:0:0,-3.61236,-10 0|0:75.8996:11:11:409:0:0:0,-3.31133,-10 0|0:99:78:78:2836:0:0:0,-10,-10 0|0:99:38:38:1411:0:0:0,-10,-10 0|0:99:59:59:2124:0:0:0,-10,-10 0|0:99:31:29:1080:0:0:0,-8.72987,-10 0|0:99:22:22:792:0:0:0,-6.62266,-10 0|0:0.00312656:9:8:293:1:36:-1.84497,0,-10 0|0:99:53:53:1935:0:0:0,-10,-10 0|0:99:47:47:1723:0:0:0,-10,-10 0|0:78.9099:12:12:441:0:0:0,-3.61236,-10 0|0:0.00517526:32:29:1067:3:101:-3.48919,0,-10 0|0:99:31:30:1071:0:0:0,-9.0309,-10 0|0:84.9304:14:14:528:0:0:0,-4.21442,-10 scaffold_56 846638 . T G 16845.3 . AB=0.476864;ABP=6.62756;AC=53;AF=0.288043;AN=184;AO=607;CIGAR=1X;DP=2266;DPB=2266;DPRA=1.16304;EPP=4.58793;EPPR=5.67045;GTI=2;LEN=1;MEANALT=1.025;MQM=59.8731;MQMR=59.9673;NS=92;NUMALT=1;ODDS=0.14897;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=21881;QR=60106;RO=1653;RPP=1321.09;RPPR=3583.77;RUN=1;SAF=314;SAP=4.58793;SAR=293;SRF=850;SRP=5.91216;SRR=803;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:35.4076:15:14:483:1:14:0,-1.93936,-10 0/1:0.269977:12:1:16:11:418:-10,-0.933179,0 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:79.3016:22:22:796:0:0:0,-6.62266,-10 0/1:99:17:10:371:7:254:-10,0,-10 0/0:37.1575:9:8:251:0:0:0,-2.40824,-10 0/0:99:47:47:1720:0:0:0,-10,-10 0/1:99:27:15:559:12:451:-10,0,-10 0/0:61.2399:16:16:579:0:0:0,-4.81648,-10 0/1:0.999266:6:0:0:6:228:-10,-1.80618,0 0/0:37.1575:8:8:298:0:0:0,-2.40824,-10 0/0:52.209:13:13:482:0:0:0,-3.91339,-10 0/1:99:43:26:958:17:642:-10,0,-10 0/1:99:51:29:1095:22:710:-10,0,-10 0/1:99:30:18:647:12:413:-10,0,-10 0/0:91.3426:26:26:959:0:0:0,-7.82678,-10 0/0:97.3569:28:28:1014:0:0:0,-8.42884,-10 0/0:55.2193:15:14:531:0:0:0,-4.21442,-10 0/1:99:25:14:531:11:374:-10,0,-10 0/1:99:38:18:665:20:734:-10,0,-10 0/0:85.3218:24:24:863:0:0:0,-7.22472,-10 0/1:99:47:22:800:25:902:-10,0,-10 1/1:8.88625:7:0:0:7:254:-10,-2.10721,0 0/0:99:29:29:1023:0:0:0,-8.72987,-10 0/0:76.2913:21:21:794:0:0:0,-6.32163,-10 0/1:99:30:19:687:11:392:-10,0,-10 0/0:99:34:34:1209:0:0:0,-10,-10 0/0:58.2296:15:15:545:0:0:0,-4.51545,-10 0/0:88.3324:25:25:893:0:0:0,-7.52575,-10 0/0:99:46:46:1720:0:0:0,-10,-10 1/1:20.9274:11:0:0:11:365:-10,-3.31133,0 1/1:5.87595:6:0:0:6:212:-10,-1.80618,0 0/0:91.3426:26:26:890:0:0:0,-7.82678,-10 1/1:14.9068:9:0:0:9:330:-10,-2.70927,0 0/0:82.3119:23:23:837:0:0:0,-6.92369,-10 0/0:52.209:13:13:485:0:0:0,-3.91339,-10 1/1:29.9583:14:0:0:14:508:-10,-4.21442,0 0/1:99:43:18:667:25:890:-10,0,-10 0/0:70.2707:19:19:715:0:0:0,-5.71957,-10 0/1:99:29:17:630:12:401:-10,0,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 1/1:60.0613:24:0:0:24:879:-10,-7.22472,0 1/1:45.0098:19:0:0:19:674:-10,-5.71957,0 0/0:99:42:42:1485:0:0:0,-10,-10 0/1:99:31:22:818:9:334:-10,0,-10 0/1:99:11:4:152:7:257:-10,0,-10 0/1:99:51:22:795:29:1071:-10,0,-10 0/1:99:30:20:675:10:366:-10,0,-10 0/0:52.209:13:13:488:0:0:0,-3.91339,-10 0/1:99:36:19:714:17:626:-10,0,-10 1/1:29.9583:14:0:0:14:510:-10,-4.21442,0 0/1:99:59:25:887:33:1223:-10,0,-10 0/0:49.1987:12:12:451:0:0:0,-3.61236,-10 0/0:43.1781:10:10:369:0:0:0,-3.0103,-10 0/1:99:54:26:929:28:1036:-10,0,-10 1/1:41.9995:18:0:0:18:670:-10,-5.41854,0 0/0:73.281:20:20:700:0:0:0,-6.0206,-10 1/1:29.9583:14:0:0:14:521:-10,-4.21442,0 1/1:32.9686:15:0:0:15:565:-10,-4.51545,0 0/0:55.2193:14:14:510:0:0:0,-4.21442,-10 0/0:99:40:40:1423:0:0:0,-10,-10 0/0:61.2399:16:16:577:0:0:0,-4.81648,-10 0/0:99:37:36:1333:0:0:0,-10,-10 0/0:91.3426:27:26:978:0:0:0,-7.82678,-10 0/0:70.2707:19:19:685:0:0:0,-5.71957,-10 0/1:99:41:23:864:18:636:-10,0,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 0/0:37.1575:8:8:293:0:0:0,-2.40824,-10 0/0:99:48:48:1795:0:0:0,-10,-10 0/0:70.2707:19:19:717:0:0:0,-5.71957,-10 0/0:91.3426:26:26:939:0:0:0,-7.82678,-10 0/0:99:42:42:1534:0:0:0,-10,-10 0/0:99:33:33:1185:0:0:0,-9.93399,-10 0/0:67.2604:18:18:622:0:0:0,-5.41854,-10 0/0:99:38:38:1380:0:0:0,-10,-10 0/0:67.2604:19:18:658:0:0:0,-5.41854,-10 1/1:54.0407:22:0:0:22:755:-10,-6.62266,0 0/0:46.1884:11:11:411:0:0:0,-3.31133,-10 0/0:37.1575:8:8:279:0:0:0,-2.40824,-10 0/0:85.3218:24:24:860:0:0:0,-7.22472,-10 0/0:48.2059:44:42:1464:2:76:0,-3.04943,-10 0/1:99:28:13:464:15:541:-10,0,-10 0/0:88.3324:25:25:916:0:0:0,-7.52575,-10 1/1:57.051:23:0:0:23:819:-10,-6.92369,0 0/1:99:39:25:921:14:521:-10,0,-10 0/0:31.1369:6:6:220:0:0:0,-1.80618,-10 1/1:38.9892:17:0:0:17:620:-10,-5.11751,0 1/1:48.0201:20:0:0:20:689:-10,-6.0206,0 0/0:34.1472:7:7:264:0:0:0,-2.10721,-10 0/0:99:32:32:1128:0:0:0,-9.63296,-10 0/0:73.281:20:20:730:0:0:0,-6.0206,-10 0/0:58.2296:15:15:549:0:0:0,-4.51545,-10 scaffold_56 846643 . T C 2092.63 . AB=0.677966;ABP=35.472;AC=4;AF=0.0217391;AN=184;AO=82;CIGAR=1X;DP=2266;DPB=2266;DPRA=1.25176;EPP=6.82362;EPPR=4.85122;GTI=1;LEN=1;MEANALT=1;MQM=59.9634;MQMR=59.9344;NS=92;NUMALT=1;ODDS=2.64553;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2964;QR=79405;RO=2181;RPP=172.491;RPPR=4473.56;RUN=1;SAF=46;SAP=5.65844;SAR=36;SRF=1117;SRP=5.80703;SRR=1064;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.316:15:15:527:0:0:0,-4.51545,-10 0/0:32.2851:12:12:445:0:0:0,-3.61236,-10 0/0:83.4601:29:29:1092:0:0:0,-8.72987,-10 0/0:62.3881:22:22:774:0:0:0,-6.62266,-10 0/0:47.3366:17:17:646:0:0:0,-5.11751,-10 0/0:23.2542:9:9:304:0:0:0,-2.70927,-10 0/0:99:47:47:1759:0:0:0,-10,-10 0/0:77.4396:27:27:1017:0:0:0,-8.12781,-10 0/0:44.3263:16:16:566:0:0:0,-4.81648,-10 0/0:14.2233:6:6:228:0:0:0,-1.80618,-10 0/0:20.2439:8:8:300:0:0:0,-2.40824,-10 0/0:35.2954:13:13:462:0:0:0,-3.91339,-10 0/0:99:43:43:1563:0:0:0,-10,-10 0/0:99:51:51:1825:0:0:0,-10,-10 0/0:86.4702:30:30:1057:0:0:0,-9.0309,-10 0/0:74.4293:26:26:973:0:0:0,-7.82678,-10 0/0:80.4499:28:28:1014:0:0:0,-8.42884,-10 0/0:41.316:15:15:553:0:0:0,-4.51545,-10 0/0:71.419:25:25:927:0:0:0,-7.52575,-10 0/0:99:38:38:1418:0:0:0,-10,-10 0/1:99:24:12:412:12:455:-10,0,-10 0/0:99:47:47:1687:0:0:0,-10,-10 0/0:17.2336:7:7:239:0:0:0,-2.10721,-10 0/0:83.4601:29:29:1053:0:0:0,-8.72987,-10 0/0:59.3778:21:21:790:0:0:0,-6.32163,-10 0/0:86.4702:30:30:1082:0:0:0,-9.0309,-10 0/0:98.5063:34:34:1225:0:0:0,-10,-10 0/0:41.316:15:15:550:0:0:0,-4.51545,-10 0/0:71.419:25:25:921:0:0:0,-7.52575,-10 0/0:99:46:46:1713:0:0:0,-10,-10 0/0:29.2748:11:11:404:0:0:0,-3.31133,-10 0/0:14.2233:6:6:224:0:0:0,-1.80618,-10 0/0:74.4293:26:26:950:0:0:0,-7.82678,-10 0/0:23.2542:9:9:341:0:0:0,-2.70927,-10 0/0:65.3984:23:23:782:0:0:0,-6.92369,-10 0/0:35.2954:13:13:464:0:0:0,-3.91339,-10 0/0:38.3057:14:14:524:0:0:0,-4.21442,-10 0/0:99:43:43:1572:0:0:0,-10,-10 0/0:53.3572:19:19:713:0:0:0,-5.71957,-10 0/0:83.4601:29:29:1044:0:0:0,-8.72987,-10 0/0:86.4702:30:30:1097:0:0:0,-9.0309,-10 0/0:68.4087:24:24:909:0:0:0,-7.22472,-10 0/0:53.3572:19:19:671:0:0:0,-5.71957,-10 0/1:99:42:23:848:19:710:-10,0,-10 0/0:89.4802:31:31:1114:0:0:0,-9.33193,-10 0/0:29.2748:11:11:416:0:0:0,-3.31133,-10 0/0:99:51:51:1859:0:0:0,-10,-10 0/0:86.4702:30:30:1048:0:0:0,-9.0309,-10 0/0:35.2954:13:13:485:0:0:0,-3.91339,-10 0/0:99:36:36:1284:0:0:0,-10,-10 0/0:38.3057:14:14:528:0:0:0,-4.21442,-10 0/0:99:59:59:2060:0:0:0,-10,-10 0/0:32.2851:12:12:443:0:0:0,-3.61236,-10 0/0:26.2645:10:10:375:0:0:0,-3.0103,-10 0/0:99:54:54:1982:0:0:0,-10,-10 0/0:50.3469:18:18:677:0:0:0,-5.41854,-10 0/0:56.3675:20:20:702:0:0:0,-6.0206,-10 0/0:38.3057:14:14:525:0:0:0,-4.21442,-10 0/0:41.316:15:15:545:0:0:0,-4.51545,-10 0/0:38.3057:14:14:519:0:0:0,-4.21442,-10 0/0:99:40:40:1440:0:0:0,-10,-10 0/0:44.3263:16:16:582:0:0:0,-4.81648,-10 0/0:99:37:37:1345:0:0:0,-10,-10 0/0:77.4396:27:27:994:0:0:0,-8.12781,-10 0/0:53.3572:19:19:658:0:0:0,-5.71957,-10 0/0:70.8102:41:40:1461:1:38:0,-6.92945,-10 0/0:83.4601:29:29:1060:0:0:0,-8.72987,-10 0/0:20.2439:8:8:304:0:0:0,-2.40824,-10 0/0:99:48:48:1807:0:0:0,-10,-10 0/0:53.3572:19:19:683:0:0:0,-5.71957,-10 0/0:74.4293:26:26:943:0:0:0,-7.82678,-10 0/0:99:42:42:1501:0:0:0,-10,-10 0/0:95.4987:33:33:1192:0:0:0,-9.93399,-10 0/0:50.3469:18:18:675:0:0:0,-5.41854,-10 0/0:99:38:38:1330:0:0:0,-10,-10 0/0:53.3572:19:19:700:0:0:0,-5.71957,-10 0/0:59.3778:22:21:750:0:0:0,-6.32163,-10 0/0:29.2748:11:11:418:0:0:0,-3.31133,-10 0/1:0.239908:8:0:0:8:290:-10,-2.40824,0 0/0:68.4087:24:24:897:0:0:0,-7.22472,-10 0/1:37.8063:44:3:108:41:1457:-10,0,-0.956699 0/0:80.4499:28:28:980:0:0:0,-8.42884,-10 0/0:68.4087:25:24:889:0:0:0,-7.22472,-10 0/0:40.7905:23:22:828:1:14:0,-4.16196,-10 0/0:99:39:39:1429:0:0:0,-10,-10 0/0:14.2233:6:6:197:0:0:0,-1.80618,-10 0/0:47.3366:17:17:642:0:0:0,-5.11751,-10 0/0:56.3675:20:20:708:0:0:0,-6.0206,-10 0/0:17.2336:7:7:244:0:0:0,-2.10721,-10 0/0:89.4802:32:31:1137:0:0:0,-9.33193,-10 0/0:56.3675:20:20:753:0:0:0,-6.0206,-10 0/0:41.316:15:15:523:0:0:0,-4.51545,-10 scaffold_56 846657 . C A 470.032 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=21;CIGAR=1X;DP=2266;DPB=2266;DPRA=1.07164;EPP=3.1137;EPPR=6.73006;GTI=0;LEN=1;MEANALT=1;MQM=59.8571;MQMR=59.9274;NS=92;NUMALT=1;ODDS=9.19312;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=729;QR=81244;RO=2244;RPP=48.6112;RPPR=4867.11;RUN=1;SAF=10;SAP=3.1137;SAR=11;SRF=1154;SRP=6.97391;SRR=1090;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.3694:15:14:520:1:16:0,-1.73936,-10 0/0:57.9897:12:12:443:0:0:0,-3.61236,-10 0/0:99:29:29:1093:0:0:0,-8.72987,-10 0/0:88.0924:22:22:764:0:0:0,-6.62266,-10 0/0:73.0412:17:17:619:0:0:0,-5.11751,-10 0/0:48.9588:9:9:290:0:0:0,-2.70927,-10 0/0:99:47:47:1741:0:0:0,-10,-10 0/0:99:27:27:964:0:0:0,-8.12781,-10 0/0:67.0206:16:15:542:0:0:0,-4.51545,-10 0/0:39.9279:6:6:228:0:0:0,-1.80618,-10 0/0:45.9485:8:8:294:0:0:0,-2.40824,-10 0/0:61:13:13:466:0:0:0,-3.91339,-10 0/0:99:43:43:1590:0:0:0,-10,-10 0/0:99:51:51:1859:0:0:0,-10,-10 0/0:99:30:30:1026:0:0:0,-9.0309,-10 0/0:50.9217:26:25:937:1:38:0,-2.61181,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:67.0206:15:15:542:0:0:0,-4.51545,-10 0/0:97.1213:25:25:945:0:0:0,-7.52575,-10 0/0:99:38:38:1439:0:0:0,-10,-10 0/0:94.1121:24:24:861:0:0:0,-7.22472,-10 0/0:99:47:47:1680:0:0:0,-10,-10 0/0:42.9382:7:7:266:0:0:0,-2.10721,-10 0/0:99:29:29:1025:0:0:0,-8.72987,-10 0/0:85.0822:21:21:791:0:0:0,-6.32163,-10 0/0:99:30:30:1066:0:0:0,-9.0309,-10 0/0:99:34:34:1223:0:0:0,-10,-10 0/0:67.0206:15:15:525:0:0:0,-4.51545,-10 0/0:97.1213:25:25:908:0:0:0,-7.52575,-10 0/0:99:46:46:1669:0:0:0,-10,-10 0/0:54.9794:11:11:402:0:0:0,-3.31133,-10 0/0:39.9279:6:6:199:0:0:0,-1.80618,-10 0/0:99:26:26:923:0:0:0,-7.82678,-10 0/0:48.9588:9:9:295:0:0:0,-2.70927,-10 0/0:91.1024:23:23:821:0:0:0,-6.92369,-10 0/0:61:13:13:441:0:0:0,-3.91339,-10 0/0:64.0103:14:14:520:0:0:0,-4.21442,-10 0/0:99:43:43:1531:0:0:0,-10,-10 0/0:79.0617:19:19:684:0:0:0,-5.71957,-10 0/0:99:29:29:1068:0:0:0,-8.72987,-10 0/0:99:30:30:1124:0:0:0,-9.0309,-10 0/0:94.1121:24:24:874:0:0:0,-7.22472,-10 0/0:79.0617:19:19:676:0:0:0,-5.71957,-10 0/0:99:42:42:1524:0:0:0,-10,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:54.9794:11:11:415:0:0:0,-3.31133,-10 0/0:99:51:51:1838:0:0:0,-10,-10 0/0:99:30:30:1059:0:0:0,-9.0309,-10 0/0:61:13:13:493:0:0:0,-3.91339,-10 0/0:99:36:36:1249:0:0:0,-10,-10 0/0:64.0103:14:14:529:0:0:0,-4.21442,-10 0/0:99:59:59:2102:0:0:0,-10,-10 0/0:57.9897:12:12:451:0:0:0,-3.61236,-10 0/0:51.9691:10:10:351:0:0:0,-3.0103,-10 0/0:99:54:54:1894:0:0:0,-10,-10 0/0:76.0515:18:18:676:0:0:0,-5.41854,-10 0/0:82.0719:20:20:736:0:0:0,-6.0206,-10 0/0:64.0103:14:14:524:0:0:0,-4.21442,-10 0/0:67.0206:15:15:546:0:0:0,-4.51545,-10 0/0:64.0103:14:14:514:0:0:0,-4.21442,-10 0/0:99:40:40:1380:0:0:0,-10,-10 0/0:70.0309:16:16:589:0:0:0,-4.81648,-10 0/0:99:37:37:1297:0:0:0,-10,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:79.0617:19:19:661:0:0:0,-5.71957,-10 0/0:99:41:41:1515:0:0:0,-10,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:45.9485:8:8:303:0:0:0,-2.40824,-10 0/0:99:48:48:1725:0:0:0,-10,-10 0/0:79.0617:19:19:712:0:0:0,-5.71957,-10 0/0:99:26:26:892:0:0:0,-7.82678,-10 0/0:99:42:42:1562:0:0:0,-10,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:76.0515:18:18:672:0:0:0,-5.41854,-10 0/1:99:38:19:699:19:675:-10,0,-10 0/0:79.0617:19:19:717:0:0:0,-5.71957,-10 0/0:88.0924:22:22:748:0:0:0,-6.62266,-10 0/0:54.9794:11:11:390:0:0:0,-3.31133,-10 0/0:45.9485:8:8:297:0:0:0,-2.40824,-10 0/0:94.1121:24:24:894:0:0:0,-7.22472,-10 0/0:99:44:44:1584:0:0:0,-10,-10 0/0:99:28:28:1053:0:0:0,-8.42884,-10 0/0:97.1213:25:25:885:0:0:0,-7.52575,-10 0/0:91.1024:23:23:832:0:0:0,-6.92369,-10 0/0:99:39:39:1415:0:0:0,-10,-10 0/0:39.9279:6:6:203:0:0:0,-1.80618,-10 0/0:73.0412:17:17:629:0:0:0,-5.11751,-10 0/0:82.0719:20:20:723:0:0:0,-6.0206,-10 0/0:42.9382:7:7:251:0:0:0,-2.10721,-10 0/0:99:32:32:1156:0:0:0,-9.63296,-10 0/0:82.0719:20:20:723:0:0:0,-6.0206,-10 0/0:67.0206:15:15:514:0:0:0,-4.51545,-10 scaffold_56 867630 . G A 398.639 . AB=0.516129;ABP=3.08035;AC=1;AF=0.00581395;AN=172;AO=16;CIGAR=2X;DP=2173;DPB=2173;DPRA=1.23016;EPP=3.55317;EPPR=3.59259;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9777;NS=86;NUMALT=1;ODDS=8.04174;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=579;QR=77093;RO=2148;RPP=37.7539;RPPR=4658.65;RUN=1;SAF=7;SAP=3.55317;SAR=9;SRF=1085;SRP=3.49959;SRR=1063;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:83.0914:17:17:612:0:0:0,-5.11751,-10 0|0:74.0604:14:14:488:0:0:0,-4.21442,-10 0|0:99:28:28:1020:0:0:0,-8.42884,-10 .:.:.:.:.:.:.:. 0|0:52.9883:7:7:259:0:0:0,-2.10721,-10 0|0:49.978:7:6:205:0:0:0,-1.80618,-10 0|0:99:66:66:2444:0:0:0,-10,-10 0|0:77.0707:15:15:495:0:0:0,-4.51545,-10 0|0:68.0398:12:12:418:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0|0:55.9986:8:8:287:0:0:0,-2.40824,-10 0|0:59.0089:9:9:336:0:0:0,-2.70927,-10 0|0:99:44:44:1590:0:0:0,-10,-10 0|0:68.0398:12:12:395:0:0:0,-3.61236,-10 0|0:86.1017:18:18:660:0:0:0,-5.41854,-10 0|0:77.0707:15:15:523:0:0:0,-4.51545,-10 0|0:99:33:33:1168:0:0:0,-9.93399,-10 0|0:80.0809:16:16:577:0:0:0,-4.81648,-10 0|0:99:36:36:1293:0:0:0,-10,-10 0|0:98.1384:22:22:795:0:0:0,-6.62266,-10 0|0:68.0398:13:12:418:0:0:0,-3.61236,-10 0|0:99:44:44:1604:0:0:0,-10,-10 0|0:80.0809:16:16:573:0:0:0,-4.81648,-10 0|0:95.1335:21:21:762:0:0:0,-6.32163,-10 0|0:95.1335:21:21:774:0:0:0,-6.32163,-10 0|0:99:39:39:1396:0:0:0,-10,-10 0|0:99:26:26:932:0:0:0,-7.82678,-10 0|0:99:26:26:922:0:0:0,-7.82678,-10 0|0:99:30:30:1092:0:0:0,-9.0309,-10 0|0:99:40:40:1412:0:0:0,-10,-10 0|0:52.9883:7:7:252:0:0:0,-2.10721,-10 0|0:49.978:6:6:200:0:0:0,-1.80618,-10 0|0:92.1227:20:20:738:0:0:0,-6.0206,-10 0|0:80.0809:16:16:533:0:0:0,-4.81648,-10 0|0:99:40:40:1446:0:0:0,-10,-10 0|0:62.0192:10:10:373:0:0:0,-3.0103,-10 0|0:74.0604:14:14:445:0:0:0,-4.21442,-10 0|0:99:27:27:917:0:0:0,-8.12781,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0|0:99:40:40:1456:0:0:0,-10,-10 0|0:34.9265:1:1:38:0:0:0,-0.30103,-3.8 0|0:98.1384:22:22:793:0:0:0,-6.62266,-10 0|0:99:58:58:2106:0:0:0,-10,-10 0|0:99:38:37:1331:0:0:0,-10,-10 0|0:86.1017:18:18:665:0:0:0,-5.41854,-10 0|0:99:38:38:1370:0:0:0,-10,-10 0|0:99:32:32:1194:0:0:0,-9.63296,-10 0|0:95.1335:21:21:716:0:0:0,-6.32163,-10 0|0:99:70:70:2441:0:0:0,-10,-10 .:.:.:.:.:.:.:. 0|0:99:61:60:2159:0:0:0,-10,-10 0|0:92.1227:20:20:710:0:0:0,-6.0206,-10 .:.:.:.:.:.:.:. 0|0:99:58:58:2076:0:0:0,-10,-10 0|0:99:23:23:824:0:0:0,-6.92369,-10 0|0:83.0914:17:17:609:0:0:0,-5.11751,-10 0|0:65.0295:11:11:384:0:0:0,-3.31133,-10 0|0:99:24:24:858:0:0:0,-7.22472,-10 0|0:74.0604:14:14:493:0:0:0,-4.21442,-10 0|0:99:52:52:1855:0:0:0,-10,-10 0|0:99:24:24:861:0:0:0,-7.22472,-10 0|0:99:43:43:1592:0:0:0,-10,-10 0|0:99:30:30:1106:0:0:0,-9.0309,-10 0|0:86.1017:19:18:646:0:0:0,-5.41854,-10 0|0:99:48:47:1688:0:0:0,-10,-10 0|0:99:28:28:1016:0:0:0,-8.42884,-10 0|0:77.0707:15:15:540:0:0:0,-4.51545,-10 0|0:99:58:56:2033:0:0:0,-10,-10 0|0:77.0707:15:15:521:0:0:0,-4.51545,-10 0|0:92.1227:20:20:717:0:0:0,-6.0206,-10 0|0:99:37:37:1339:0:0:0,-10,-10 0|0:99:27:27:951:0:0:0,-8.12781,-10 0|0:99:23:23:794:0:0:0,-6.92369,-10 0|0:99:50:50:1768:0:0:0,-10,-10 0|0:99:23:23:858:0:0:0,-6.92369,-10 0|0:77.0707:15:15:538:0:0:0,-4.51545,-10 0|0:71.0501:13:13:491:0:0:0,-3.91339,-10 0|0:71.0501:13:13:437:0:0:0,-3.91339,-10 0|0:62.0192:10:10:359:0:0:0,-3.0103,-10 0|0:99:43:43:1572:0:0:0,-10,-10 0|1:99:31:15:555:16:579:-10,0,-10 0|0:98.1384:23:22:794:0:0:0,-6.62266,-10 0|0:80.0809:16:16:565:0:0:0,-4.81648,-10 0|0:89.1122:19:19:702:0:0:0,-5.71957,-10 0|0:46.9677:5:5:189:0:0:0,-1.50515,-10 0|0:99:26:26:922:0:0:0,-7.82678,-10 0|0:99:23:23:836:0:0:0,-6.92369,-10 0|0:55.9986:8:8:288:0:0:0,-2.40824,-10 0|0:89.1122:19:19:694:0:0:0,-5.71957,-10 0|0:99:26:26:926:0:0:0,-7.82678,-10 0|0:62.0192:10:10:363:0:0:0,-3.0103,-10 scaffold_56 867631 . A T 398.639 . AB=0.516129;ABP=3.08035;AC=1;AF=0.00581395;AN=172;AO=16;CIGAR=2X;DP=2173;DPB=2173;DPRA=1.23016;EPP=3.55317;EPPR=3.59259;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9777;NS=86;NUMALT=1;ODDS=8.04174;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=579;QR=77093;RO=2148;RPP=37.7539;RPPR=4658.65;RUN=1;SAF=7;SAP=3.55317;SAR=9;SRF=1085;SRP=3.49959;SRR=1063;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:83.0914:17:17:612:0:0:0,-5.11751,-10 0|0:74.0604:14:14:488:0:0:0,-4.21442,-10 0|0:99:28:28:1020:0:0:0,-8.42884,-10 .:.:.:.:.:.:.:. 0|0:52.9883:7:7:259:0:0:0,-2.10721,-10 0|0:49.978:7:6:205:0:0:0,-1.80618,-10 0|0:99:66:66:2444:0:0:0,-10,-10 0|0:77.0707:15:15:495:0:0:0,-4.51545,-10 0|0:68.0398:12:12:418:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0|0:55.9986:8:8:287:0:0:0,-2.40824,-10 0|0:59.0089:9:9:336:0:0:0,-2.70927,-10 0|0:99:44:44:1590:0:0:0,-10,-10 0|0:68.0398:12:12:395:0:0:0,-3.61236,-10 0|0:86.1017:18:18:660:0:0:0,-5.41854,-10 0|0:77.0707:15:15:523:0:0:0,-4.51545,-10 0|0:99:33:33:1168:0:0:0,-9.93399,-10 0|0:80.0809:16:16:577:0:0:0,-4.81648,-10 0|0:99:36:36:1293:0:0:0,-10,-10 0|0:98.1384:22:22:795:0:0:0,-6.62266,-10 0|0:68.0398:13:12:418:0:0:0,-3.61236,-10 0|0:99:44:44:1604:0:0:0,-10,-10 0|0:80.0809:16:16:573:0:0:0,-4.81648,-10 0|0:95.1335:21:21:762:0:0:0,-6.32163,-10 0|0:95.1335:21:21:774:0:0:0,-6.32163,-10 0|0:99:39:39:1396:0:0:0,-10,-10 0|0:99:26:26:932:0:0:0,-7.82678,-10 0|0:99:26:26:922:0:0:0,-7.82678,-10 0|0:99:30:30:1092:0:0:0,-9.0309,-10 0|0:99:40:40:1412:0:0:0,-10,-10 0|0:52.9883:7:7:252:0:0:0,-2.10721,-10 0|0:49.978:6:6:200:0:0:0,-1.80618,-10 0|0:92.1227:20:20:738:0:0:0,-6.0206,-10 0|0:80.0809:16:16:533:0:0:0,-4.81648,-10 0|0:99:40:40:1446:0:0:0,-10,-10 0|0:62.0192:10:10:373:0:0:0,-3.0103,-10 0|0:74.0604:14:14:445:0:0:0,-4.21442,-10 0|0:99:27:27:917:0:0:0,-8.12781,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0|0:99:40:40:1456:0:0:0,-10,-10 0|0:34.9265:1:1:38:0:0:0,-0.30103,-3.8 0|0:98.1384:22:22:793:0:0:0,-6.62266,-10 0|0:99:58:58:2106:0:0:0,-10,-10 0|0:99:38:37:1331:0:0:0,-10,-10 0|0:86.1017:18:18:665:0:0:0,-5.41854,-10 0|0:99:38:38:1370:0:0:0,-10,-10 0|0:99:32:32:1194:0:0:0,-9.63296,-10 0|0:95.1335:21:21:716:0:0:0,-6.32163,-10 0|0:99:70:70:2441:0:0:0,-10,-10 .:.:.:.:.:.:.:. 0|0:99:61:60:2159:0:0:0,-10,-10 0|0:92.1227:20:20:710:0:0:0,-6.0206,-10 .:.:.:.:.:.:.:. 0|0:99:58:58:2076:0:0:0,-10,-10 0|0:99:23:23:824:0:0:0,-6.92369,-10 0|0:83.0914:17:17:609:0:0:0,-5.11751,-10 0|0:65.0295:11:11:384:0:0:0,-3.31133,-10 0|0:99:24:24:858:0:0:0,-7.22472,-10 0|0:74.0604:14:14:493:0:0:0,-4.21442,-10 0|0:99:52:52:1855:0:0:0,-10,-10 0|0:99:24:24:861:0:0:0,-7.22472,-10 0|0:99:43:43:1592:0:0:0,-10,-10 0|0:99:30:30:1106:0:0:0,-9.0309,-10 0|0:86.1017:19:18:646:0:0:0,-5.41854,-10 0|0:99:48:47:1688:0:0:0,-10,-10 0|0:99:28:28:1016:0:0:0,-8.42884,-10 0|0:77.0707:15:15:540:0:0:0,-4.51545,-10 0|0:99:58:56:2033:0:0:0,-10,-10 0|0:77.0707:15:15:521:0:0:0,-4.51545,-10 0|0:92.1227:20:20:717:0:0:0,-6.0206,-10 0|0:99:37:37:1339:0:0:0,-10,-10 0|0:99:27:27:951:0:0:0,-8.12781,-10 0|0:99:23:23:794:0:0:0,-6.92369,-10 0|0:99:50:50:1768:0:0:0,-10,-10 0|0:99:23:23:858:0:0:0,-6.92369,-10 0|0:77.0707:15:15:538:0:0:0,-4.51545,-10 0|0:71.0501:13:13:491:0:0:0,-3.91339,-10 0|0:71.0501:13:13:437:0:0:0,-3.91339,-10 0|0:62.0192:10:10:359:0:0:0,-3.0103,-10 0|0:99:43:43:1572:0:0:0,-10,-10 0|1:99:31:15:555:16:579:-10,0,-10 0|0:98.1384:23:22:794:0:0:0,-6.62266,-10 0|0:80.0809:16:16:565:0:0:0,-4.81648,-10 0|0:89.1122:19:19:702:0:0:0,-5.71957,-10 0|0:46.9677:5:5:189:0:0:0,-1.50515,-10 0|0:99:26:26:922:0:0:0,-7.82678,-10 0|0:99:23:23:836:0:0:0,-6.92369,-10 0|0:55.9986:8:8:288:0:0:0,-2.40824,-10 0|0:89.1122:19:19:694:0:0:0,-5.71957,-10 0|0:99:26:26:926:0:0:0,-7.82678,-10 0|0:62.0192:10:10:363:0:0:0,-3.0103,-10 scaffold_56 867648 . G A 1758.29 . AB=0.604651;ABP=11.1912;AC=4;AF=0.0232558;AN=172;AO=68;CIGAR=1X;DP=2173;DPB=2173;DPRA=1.29228;EPP=9.26925;EPPR=3.65565;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9601;NS=86;NUMALT=1;ODDS=0.478883;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2486;QR=74245;RO=2103;RPP=150.67;RPPR=4509.02;RUN=1;SAF=27;SAP=9.26925;SAR=41;SRF=1071;SRP=4.58082;SRR=1032;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.8169:17:17:610:0:0:0,-5.11751,-10 0/0:51.786:14:14:467:0:0:0,-4.21442,-10 0/0:93.9295:28:28:940:0:0:0,-8.42884,-10 .:.:.:.:.:.:.:. 0/0:30.7139:7:7:256:0:0:0,-2.10721,-10 0/0:30.7139:7:7:256:0:0:0,-2.10721,-10 0/0:99:66:66:2373:0:0:0,-10,-10 0/0:54.7963:15:15:527:0:0:0,-4.51545,-10 0/0:45.7654:12:12:414:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0/0:33.7242:8:8:259:0:0:0,-2.40824,-10 0/0:36.7345:9:9:285:0:0:0,-2.70927,-10 0/0:99:44:44:1593:0:0:0,-10,-10 0/0:45.7654:12:12:403:0:0:0,-3.61236,-10 0/0:63.8272:18:18:666:0:0:0,-5.41854,-10 0/0:54.7963:15:15:456:0:0:0,-4.51545,-10 0/0:99:33:32:1195:0:0:0,-9.63296,-10 0/0:57.8066:16:16:528:0:0:0,-4.81648,-10 0/0:99:36:36:1275:0:0:0,-10,-10 0/0:75.8684:22:22:791:0:0:0,-6.62266,-10 0/0:45.7654:13:12:352:0:0:0,-3.61236,-10 0/0:99:44:44:1595:0:0:0,-10,-10 0/0:57.8066:16:16:577:0:0:0,-4.81648,-10 0/0:48.5156:21:20:744:1:16:0,-3.39941,-10 0/0:72.8581:21:21:707:0:0:0,-6.32163,-10 0/0:99:39:39:1378:0:0:0,-10,-10 0/0:87.9088:26:26:799:0:0:0,-7.82678,-10 0/0:87.9088:26:26:972:0:0:0,-7.82678,-10 0/0:99:30:30:1098:0:0:0,-9.0309,-10 0/0:99:40:40:1394:0:0:0,-10,-10 0/0:30.7139:7:7:240:0:0:0,-2.10721,-10 0/0:27.7036:6:6:228:0:0:0,-1.80618,-10 0/0:69.8478:20:20:717:0:0:0,-6.0206,-10 0/0:57.8066:16:16:527:0:0:0,-4.81648,-10 0/0:99:40:40:1466:0:0:0,-10,-10 0/0:39.7448:10:10:344:0:0:0,-3.0103,-10 0/0:51.786:14:14:476:0:0:0,-4.21442,-10 0/0:90.9196:27:27:935:0:0:0,-8.12781,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:99:40:40:1424:0:0:0,-10,-10 0/0:12.6521:1:1:38:0:0:0,-0.30103,-3.8 0/0:75.8684:22:22:770:0:0:0,-6.62266,-10 0/0:99:58:58:2107:0:0:0,-10,-10 0/0:99:38:38:1300:0:0:0,-10,-10 0/0:63.8272:18:18:618:0:0:0,-5.41854,-10 0/0:99:38:38:1371:0:0:0,-10,-10 0/0:99:32:32:1137:0:0:0,-9.63296,-10 0/0:72.8581:21:21:704:0:0:0,-6.32163,-10 0/0:99:70:70:2453:0:0:0,-10,-10 .:.:.:.:.:.:.:. 0/0:99:61:61:2174:0:0:0,-10,-10 0/0:69.8478:20:20:682:0:0:0,-6.0206,-10 .:.:.:.:.:.:.:. 0/0:99:58:58:1935:0:0:0,-10,-10 0/0:78.8787:23:23:820:0:0:0,-6.92369,-10 0/0:60.8169:17:17:612:0:0:0,-5.11751,-10 0/0:42.7551:11:11:399:0:0:0,-3.31133,-10 0/0:81.8888:24:24:874:0:0:0,-7.22472,-10 0/0:51.786:14:14:523:0:0:0,-4.21442,-10 0/0:99:52:52:1882:0:0:0,-10,-10 0/0:56.9665:24:23:800:1:16:0,-4.24451,-10 0/1:99:43:18:659:25:937:-10,0,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:66.8375:19:19:704:0:0:0,-5.71957,-10 0/0:99:48:47:1663:1:38:0,-8.9682,-10 0/0:93.9295:28:28:942:0:0:0,-8.42884,-10 0/0:54.7963:15:15:532:0:0:0,-4.51545,-10 0/0:99:58:58:2058:0:0:0,-10,-10 0/0:54.7963:15:15:523:0:0:0,-4.51545,-10 0/0:69.8478:20:20:696:0:0:0,-6.0206,-10 0/0:99:37:37:1289:0:0:0,-10,-10 0/0:90.9196:27:27:956:0:0:0,-8.12781,-10 0/0:78.8787:23:23:793:0:0:0,-6.92369,-10 0/0:99:50:50:1776:0:0:0,-10,-10 0/0:78.8787:23:23:857:0:0:0,-6.92369,-10 0/0:54.7963:15:15:509:0:0:0,-4.51545,-10 0/0:48.7757:13:13:415:0:0:0,-3.91339,-10 1/1:4.45853:13:0:0:13:456:-10,-3.91339,0 0/0:39.7448:10:10:352:0:0:0,-3.0103,-10 0/1:99:43:16:559:27:1023:-10,0,-10 0/0:99:31:31:1072:0:0:0,-9.33193,-10 0/0:78.8787:23:23:821:0:0:0,-6.92369,-10 0/0:57.8066:16:16:554:0:0:0,-4.81648,-10 0/0:66.8375:19:19:661:0:0:0,-5.71957,-10 0/0:24.6933:5:5:184:0:0:0,-1.50515,-10 0/0:87.9088:26:26:959:0:0:0,-7.82678,-10 0/0:78.8787:23:23:842:0:0:0,-6.92369,-10 0/0:33.7242:8:8:303:0:0:0,-2.40824,-10 0/0:66.8375:19:19:686:0:0:0,-5.71957,-10 0/0:87.9088:26:26:946:0:0:0,-7.82678,-10 0/0:39.7448:10:10:371:0:0:0,-3.0103,-10 scaffold_56 881271 . C G 174.571 . AB=0.444444;ABP=3.49285;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1759;DPB=1759;DPRA=0.940839;EPP=7.35324;EPPR=3.61087;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9789;NS=92;NUMALT=1;ODDS=10.6451;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=63944;RO=1750;RPP=20.3821;RPPR=3803.09;RUN=1;SAF=2;SAP=7.35324;SAR=6;SRF=864;SRP=3.61087;SRR=886;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.3242:10:10:376:0:0:0,-3.0103,-10 0/0:58.2727:5:5:188:0:0:0,-1.50515,-10 0/1:99:18:10:371:8:304:-10,0,-10 0/0:73.3242:10:10:380:0:0:0,-3.0103,-10 0/0:79.3448:12:12:420:0:0:0,-3.61236,-10 0/0:67.3036:8:8:280:0:0:0,-2.40824,-10 0/0:99:38:38:1416:0:0:0,-10,-10 0/0:79.3448:12:12:452:0:0:0,-3.61236,-10 0/0:82.355:13:13:482:0:0:0,-3.91339,-10 0/0:52.2521:3:3:114:0:0:0,-0.90309,-10 0/0:61.283:6:6:226:0:0:0,-1.80618,-10 0/0:70.3139:9:9:337:0:0:0,-2.70927,-10 0/0:99:21:21:768:0:0:0,-6.32163,-10 0/0:99:40:40:1437:0:0:0,-10,-10 0/0:99:20:20:750:0:0:0,-6.0206,-10 0/0:82.355:13:13:451:0:0:0,-3.91339,-10 0/0:91.3855:16:16:599:0:0:0,-4.81648,-10 0/0:85.3653:14:14:523:0:0:0,-4.21442,-10 0/0:99:31:31:1147:0:0:0,-9.33193,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:91.3855:16:16:561:0:0:0,-4.81648,-10 0/0:99:20:20:739:0:0:0,-6.0206,-10 0/0:64.2933:7:7:263:0:0:0,-2.10721,-10 0/0:88.3754:15:15:538:0:0:0,-4.51545,-10 0/0:99:24:24:891:0:0:0,-7.22472,-10 0/0:99:21:21:793:0:0:0,-6.32163,-10 0/0:99:19:19:711:0:0:0,-5.71957,-10 0/0:99:19:19:699:0:0:0,-5.71957,-10 0/0:99:28:28:1033:0:0:0,-8.42884,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:70.3139:9:9:330:0:0:0,-2.70927,-10 0/0:67.3036:8:8:302:0:0:0,-2.40824,-10 0/0:99:21:21:795:0:0:0,-6.32163,-10 0/0:58.2727:5:5:159:0:0:0,-1.50515,-10 0/0:99:24:24:828:0:0:0,-7.22472,-10 0/0:55.2624:4:4:152:0:0:0,-1.20412,-10 0/0:79.3448:12:12:447:0:0:0,-3.61236,-10 0/0:99:25:25:918:0:0:0,-7.52575,-10 0/0:73.3242:10:10:371:0:0:0,-3.0103,-10 0/0:76.3345:11:11:389:0:0:0,-3.31133,-10 0/0:94.3953:17:17:618:0:0:0,-5.11751,-10 0/0:99:29:29:1043:0:0:0,-8.72987,-10 0/0:88.3754:15:15:562:0:0:0,-4.51545,-10 0/0:99:45:45:1683:0:0:0,-10,-10 0/0:99:28:28:1010:0:0:0,-8.42884,-10 0/0:76.3345:11:11:388:0:0:0,-3.31133,-10 0/0:99:59:59:2200:0:0:0,-10,-10 0/0:99:29:29:1053:0:0:0,-8.72987,-10 0/0:73.3242:10:10:365:0:0:0,-3.0103,-10 0/0:99:51:51:1890:0:0:0,-10,-10 0/0:76.3345:11:11:376:0:0:0,-3.31133,-10 0/0:99:48:48:1763:0:0:0,-10,-10 0/0:79.3448:12:12:418:0:0:0,-3.61236,-10 0/0:73.3242:10:10:363:0:0:0,-3.0103,-10 0/0:99:47:47:1732:0:0:0,-10,-10 0/0:76.3345:11:11:408:0:0:0,-3.31133,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:52.2521:3:3:110:0:0:0,-0.90309,-10 0/0:99:20:20:753:0:0:0,-6.0206,-10 0/0:94.3953:17:17:615:0:0:0,-5.11751,-10 0/0:99:24:24:829:0:0:0,-7.22472,-10 0/0:94.3953:17:17:623:0:0:0,-5.11751,-10 0/0:99:29:29:1079:0:0:0,-8.72987,-10 0/0:82.355:13:13:484:0:0:0,-3.91339,-10 0/0:70.3139:9:9:335:0:0:0,-2.70927,-10 0/0:99:19:19:687:0:0:0,-5.71957,-10 0/0:97.3992:18:18:640:0:0:0,-5.41854,-10 0/0:76.3345:11:11:418:0:0:0,-3.31133,-10 0/0:99:40:40:1400:0:0:0,-10,-10 0/0:85.3653:14:14:525:0:0:0,-4.21442,-10 0/0:91.3855:16:16:558:0:0:0,-4.81648,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:99:27:27:940:0:0:0,-8.12781,-10 0/0:94.3953:17:17:592:0:0:0,-5.11751,-10 0/0:99:51:51:1809:0:0:0,-10,-10 0/0:73.3242:10:10:328:0:0:0,-3.0103,-10 0/0:88.3754:15:15:565:0:0:0,-4.51545,-10 0/0:97.3992:18:18:670:0:0:0,-5.41854,-10 0/0:61.283:6:6:224:0:0:0,-1.80618,-10 0/0:73.3242:10:10:380:0:0:0,-3.0103,-10 0/0:99:31:31:1122:0:0:0,-9.33193,-10 0/0:99:30:29:1072:0:0:0,-8.72987,-10 0/0:99:19:19:679:0:0:0,-5.71957,-10 0/0:82.355:13:13:494:0:0:0,-3.91339,-10 0/0:99:29:29:1095:0:0:0,-8.72987,-10 0/0:46.2315:1:1:38:0:0:0,-0.30103,-3.8 0/0:82.355:13:13:461:0:0:0,-3.91339,-10 0/0:85.3653:14:14:496:0:0:0,-4.21442,-10 0/0:61.283:6:6:216:0:0:0,-1.80618,-10 0/0:70.3139:9:9:338:0:0:0,-2.70927,-10 0/0:91.3855:16:16:605:0:0:0,-4.81648,-10 0/0:76.3345:11:11:399:0:0:0,-3.31133,-10 scaffold_56 882918 . T C 56953.2 . AB=0.423077;ABP=4.34659;AC=179;AF=0.994444;AN=180;AO=1917;CIGAR=1X;DP=1935;DPB=1935;DPRA=0;EPP=12.3906;EPPR=4.9405;GTI=0;LEN=1;MEANALT=1;MQM=45.5587;MQMR=60;NS=90;NUMALT=1;ODDS=8.30789;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69312;QR=636;RO=18;RPP=4096.53;RPPR=42.0968;RUN=1;SAF=921;SAP=9.38199;SAR=996;SRF=7;SRP=4.9405;SRR=11;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:69.1981:14:0:0:14:516:-10,-4.21442,0 1/1:45.1157:6:0:0:6:226:-10,-1.80618,0 1/1:75.2187:16:0:0:16:602:-10,-4.81648,0 1/1:78.229:17:0:0:17:593:-10,-5.11751,0 1/1:81.2393:18:0:0:18:646:-10,-5.41854,0 1/1:69.1981:14:0:0:14:494:-10,-4.21442,0 1/1:99:41:0:0:41:1478:-10,-10,0 1/1:99:27:0:0:27:972:-10,-8.12781,0 1/1:60.1672:11:0:0:11:408:-10,-3.31133,0 1/1:42.1054:5:0:0:5:174:-10,-1.50515,0 1/1:36.0848:3:0:0:3:114:-10,-0.90309,0 1/1:45.1157:6:0:0:6:227:-10,-1.80618,0 1/1:99:29:0:0:29:1056:-10,-8.72987,0 1/1:99:37:0:0:37:1379:-10,-10,0 1/1:99:25:0:0:25:923:-10,-7.52575,0 1/1:90.2702:21:0:0:21:764:-10,-6.32163,0 1/1:78.229:17:0:0:17:611:-10,-5.11751,0 .:.:.:.:.:.:.:. 1/1:96.2864:23:0:0:23:867:-10,-6.92369,0 1/1:99:31:0:0:31:1093:-10,-9.33193,0 1/1:72.2084:15:0:0:15:547:-10,-4.51545,0 1/1:60.1672:11:0:0:11:410:-10,-3.31133,0 1/1:42.1054:5:0:0:5:169:-10,-1.50515,0 1/1:75.2187:16:0:0:16:607:-10,-4.81648,0 1/1:93.2783:22:0:0:22:814:-10,-6.62266,0 1/1:99:32:0:0:32:1186:-10,-9.63296,0 1/1:90.2702:21:0:0:21:752:-10,-6.32163,0 1/1:96.2864:23:0:0:23:797:-10,-6.92369,0 1/1:78.229:17:0:0:17:635:-10,-5.11751,0 1/1:99:48:0:0:48:1736:-10,-10,0 1/1:66.1878:13:0:0:13:470:-10,-3.91339,0 1/1:57.1569:10:0:0:10:325:-10,-3.0103,0 1/1:99:24:0:0:24:893:-10,-7.22472,0 1/1:96.2864:23:0:0:23:815:-10,-6.92369,0 1/1:99:26:0:0:26:935:-10,-7.82678,0 1/1:36.0848:3:0:0:3:103:-9.61333,-0.90309,0 1/1:63.1775:12:0:0:12:400:-10,-3.61236,0 1/1:51.1363:8:0:0:8:294:-10,-2.40824,0 1/1:75.2187:16:0:0:16:551:-10,-4.81648,0 1/1:75.2187:16:0:0:16:592:-10,-4.81648,0 1/1:99:42:0:0:42:1544:-10,-10,0 1/1:93.2783:22:0:0:22:812:-10,-6.62266,0 1/1:99:31:0:0:31:1051:-10,-9.33193,0 1/1:49.1712:23:1:38:22:801:-10,-1.76196,0 1/1:99:26:0:0:26:949:-10,-7.82678,0 1/1:72.2084:15:0:0:15:545:-10,-4.51545,0 1/1:99:65:0:0:65:2325:-10,-10,0 1/1:93.2783:22:0:0:22:812:-10,-6.62266,0 1/1:78.229:17:0:0:17:617:-10,-5.11751,0 1/1:99:49:0:0:49:1740:-10,-10,0 .:.:.:.:.:.:.:. 1/1:99:27:0:0:27:911:-10,-8.12781,0 1/1:81.2393:18:0:0:18:671:-10,-5.41854,0 1/1:57.1569:10:0:0:10:374:-10,-3.0103,0 1/1:99:56:0:0:56:2093:-10,-10,0 1/1:72.2084:15:0:0:15:551:-10,-4.51545,0 1/1:78.229:17:0:0:17:594:-10,-5.11751,0 1/1:51.1363:8:0:0:8:270:-10,-2.40824,0 1/1:81.2393:18:0:0:18:637:-10,-5.41854,0 1/1:87.2599:20:0:0:20:697:-10,-6.0206,0 1/1:99:39:0:0:39:1463:-10,-10,0 1/1:99:28:0:0:28:1041:-10,-8.42884,0 1/1:99:54:1:35:53:1920:-10,-10,0 1/1:93.2783:22:0:0:22:801:-10,-6.62266,0 1/1:99:24:0:0:24:867:-10,-7.22472,0 1/1:99:35:1:16:34:1218:-10,-7.39198,0 1/1:78.229:17:0:0:17:610:-10,-5.11751,0 1/1:57.1569:10:0:0:10:334:-10,-3.0103,0 1/1:99:37:0:0:37:1325:-10,-10,0 1/1:75.2187:16:0:0:16:557:-10,-4.81648,0 1/1:99:40:0:0:40:1470:-10,-10,0 0/1:99:26:15:547:11:396:-10,0,-10 1/1:99:34:0:0:34:1204:-10,-10,0 1/1:78.229:17:0:0:17:606:-10,-5.11751,0 1/1:99:34:0:0:34:1224:-10,-10,0 1/1:78.229:17:0:0:17:590:-10,-5.11751,0 1/1:57.1569:10:0:0:10:351:-10,-3.0103,0 1/1:54.1466:9:0:0:9:338:-10,-2.70927,0 1/1:42.1054:5:0:0:5:183:-10,-1.50515,0 1/1:75.2187:16:0:0:16:585:-10,-4.81648,0 1/1:99:41:0:0:41:1497:-10,-10,0 1/1:99:25:0:0:25:851:-10,-7.52575,0 1/1:99:34:0:0:34:1249:-10,-10,0 1/1:72.2084:15:0:0:15:515:-10,-4.51545,0 1/1:99:33:0:0:33:1221:-10,-9.93399,0 1/1:39.0951:4:0:0:4:152:-10,-1.20412,0 1/1:90.2702:21:0:0:21:798:-10,-6.32163,0 1/1:57.1569:10:0:0:10:353:-10,-3.0103,0 1/1:51.1363:8:0:0:8:303:-10,-2.40824,0 1/1:45.1157:6:0:0:6:199:-10,-1.80618,0 1/1:57.1569:10:0:0:10:358:-10,-3.0103,0 1/1:72.2084:15:0:0:15:565:-10,-4.51545,0 scaffold_56 890410 . G A 241.923 . AB=0.333333;ABP=10.9724;AC=1;AF=0.00543478;AN=184;AO=12;CIGAR=1X;DP=2463;DPB=2463;DPRA=0.89441;EPP=3.0103;EPPR=5.49894;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9939;NS=92;NUMALT=1;ODDS=13.7931;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=409;QR=88969;RO=2451;RPP=29.068;RPPR=5247.4;RUN=1;SAF=6;SAP=3.0103;SAR=6;SRF=1261;SRP=7.47639;SRR=1190;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:96.0227:15:15:524:0:0:0,-4.51545,-10 0/0:96.0227:15:15:548:0:0:0,-4.51545,-10 0/0:99:18:18:676:0:0:0,-5.41854,-10 0/0:99:24:24:863:0:0:0,-7.22472,-10 0/0:93.0142:14:14:491:0:0:0,-4.21442,-10 0/0:77.9644:9:9:340:0:0:0,-2.70927,-10 0/0:99:41:41:1507:0:0:0,-10,-10 0/0:99:42:42:1518:0:0:0,-10,-10 0/0:90.0048:13:13:494:0:0:0,-3.91339,-10 0/0:65.9233:5:5:189:0:0:0,-1.50515,-10 0/0:83.9849:11:11:403:0:0:0,-3.31133,-10 0/0:83.9849:11:11:387:0:0:0,-3.31133,-10 0/0:99:41:41:1474:0:0:0,-10,-10 0/0:99:49:49:1774:0:0:0,-10,-10 0/1:99:33:22:818:11:393:-10,0,-10 0/0:99:27:27:961:0:0:0,-8.12781,-10 0/0:99:26:26:919:0:0:0,-7.82678,-10 0/0:96.0227:15:15:562:0:0:0,-4.51545,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:99:53:53:1949:0:0:0,-10,-10 0/0:96.0227:15:15:419:0:0:0,-4.51545,-10 0/0:99:54:54:1967:0:0:0,-10,-10 0/0:99:17:17:641:0:0:0,-5.11751,-10 0/0:99:37:37:1364:0:0:0,-10,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:99:49:49:1709:0:0:0,-10,-10 0/0:99:19:19:693:0:0:0,-5.71957,-10 0/0:99:21:21:777:0:0:0,-6.32163,-10 0/0:99:22:22:803:0:0:0,-6.62266,-10 0/0:99:52:52:1934:0:0:0,-10,-10 0/0:65.9233:5:5:190:0:0:0,-1.50515,-10 0/0:59.9027:3:3:114:0:0:0,-0.90309,-10 0/0:99:21:21:751:0:0:0,-6.32163,-10 0/0:99:18:18:655:0:0:0,-5.41854,-10 0/0:99:23:23:827:0:0:0,-6.92369,-10 0/0:77.9644:9:9:331:0:0:0,-2.70927,-10 0/0:86.995:12:12:400:0:0:0,-3.61236,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:99:23:23:817:0:0:0,-6.92369,-10 0/0:99:20:20:727:0:0:0,-6.0206,-10 0/0:99:48:48:1762:0:0:0,-10,-10 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:99:18:18:671:0:0:0,-5.41854,-10 0/0:99:45:45:1652:0:0:0,-10,-10 0/0:99:35:35:1284:0:0:0,-10,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:99:62:62:2263:0:0:0,-10,-10 0/0:99:43:43:1594:0:0:0,-10,-10 0/0:99:17:17:588:0:0:0,-5.11751,-10 0/0:99:45:45:1647:0:0:0,-10,-10 0/0:99:17:17:626:0:0:0,-5.11751,-10 0/0:99:45:45:1579:0:0:0,-10,-10 0/0:93.0142:14:14:498:0:0:0,-4.21442,-10 0/0:93.0142:14:14:505:0:0:0,-4.21442,-10 0/0:99:67:67:2483:0:0:0,-10,-10 0/0:93.0142:14:14:452:0:0:0,-4.21442,-10 0/0:99:26:26:939:0:0:0,-7.82678,-10 0/0:77.9644:9:9:307:0:0:0,-2.70927,-10 0/0:99:25:25:922:0:0:0,-7.52575,-10 0/0:99:16:16:579:0:0:0,-4.81648,-10 0/0:99:49:49:1798:0:0:0,-10,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:99:53:53:1907:0:0:0,-10,-10 0/0:99:44:44:1619:0:0:0,-10,-10 0/0:83.9849:11:11:395:0:0:0,-3.31133,-10 0/0:99:33:33:1215:0:0:0,-9.93399,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:99:18:18:680:0:0:0,-5.41854,-10 0/0:99:54:54:2003:0:0:0,-10,-10 0/0:67.7907:15:14:487:1:16:0,-1.73936,-10 0/0:99:24:24:855:0:0:0,-7.22472,-10 0/0:99:57:57:2078:0:0:0,-10,-10 0/0:99:29:29:989:0:0:0,-8.72987,-10 0/0:99:30:30:1073:0:0:0,-9.0309,-10 0/0:99:40:40:1447:0:0:0,-10,-10 0/0:99:22:22:799:0:0:0,-6.62266,-10 0/0:93.0142:14:14:475:0:0:0,-4.21442,-10 0/0:83.9849:11:11:414:0:0:0,-3.31133,-10 0/0:83.9849:11:11:355:0:0:0,-3.31133,-10 0/0:93.0142:14:14:509:0:0:0,-4.21442,-10 0/0:99:62:62:2235:0:0:0,-10,-10 0/0:99:32:32:1164:0:0:0,-9.63296,-10 0/0:99:28:28:1016:0:0:0,-8.42884,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 0/0:99:28:28:1010:0:0:0,-8.42884,-10 0/0:77.9644:9:9:339:0:0:0,-2.70927,-10 0/0:99:18:18:676:0:0:0,-5.41854,-10 0/0:99:18:18:658:0:0:0,-5.41854,-10 0/0:71.9439:7:7:260:0:0:0,-2.10721,-10 0/0:99:16:16:563:0:0:0,-4.81648,-10 0/0:99:20:20:744:0:0:0,-6.0206,-10 0/0:99:21:21:750:0:0:0,-6.32163,-10 scaffold_56 992331 . C A,T 1729.96 . AB=0.417391,0.475;ABP=9.82684,3.22745;AC=4,1;AF=0.0217391,0.00543478;AN=184,184;AO=50,22;CIGAR=1X,1X;DP=2701,2701;DPB=2701,2701;DPRA=0.997251,1.41271;EPP=5.78978,4.58955;EPPR=9.5528,9.5528;GTI=0,0;LEN=1,1;MEANALT=1,1;MQM=59.6,59.0909;MQMR=59.9738,59.9738;NS=92,92;NUMALT=2,2;ODDS=12.7596,12.7596;PAIRED=0,0;PAIREDR=0,0;PAO=0,0;PQA=0,0;PQR=0,0;PRO=0,0;QA=1780,736;QR=95686,95686;RO=2629,2629;RPP=111.584,50.7827;RPPR=5711.81,5711.81;RUN=1,1;SAF=29,13;SAP=5.78978,4.58955;SAR=21,9;SRF=1359,1359;SRP=9.5528,9.5528;SRR=1270,1270;TYPE=snp,snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:99:26:26:951:0,0:0,0:0,-7.82678,-10,-7.82678,-10,-10 0|0:81.229:15:15:536:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|1:99:20:11:394:9,0:338,0:-10,0,-10,-10,-10,-10 0|0:90.2594:18:18:623:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:99:24:24:855:0,0:0,0:0,-7.22472,-10,-7.22472,-10,-10 0|0:93.2692:19:19:692:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:99:37:36:1339:1,0:14,0:0,-8.16991,-10,-10,-10,-10 0|0:99:33:33:1202:0,0:0,0:0,-9.93399,-10,-9.93399,-10,-10 0|0:87.2494:17:17:640:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:57.1466:7:7:266:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|0:84.2392:16:16:568:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:66.1775:10:10:367:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|2:99:40:21:765:0,19:0,683:-10,-10,-10,0,-10,-10 0|0:99:43:42:1500:0,1:0,14:0,-10,-10,-9.91082,-10,-10 0|1:99:41:25:940:16,0:589,0:-10,0,-10,-10,-10,-10 0|0:99:42:41:1480:0,1:0,14:0,-10,-10,-9.62001,-10,-10 0|0:99:33:33:1159:0,0:0,0:0,-9.93399,-10,-9.93399,-10,-10 0|0:87.2494:17:17:633:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:99:32:32:1184:0,0:0,0:0,-9.63296,-10,-9.63296,-10,-10 0|0:99:45:45:1655:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:28:28:1032:0,0:0,0:0,-8.42884,-10,-8.42884,-10,-10 0|0:99:52:52:1870:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:96.2785:20:20:741:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:99:36:36:1287:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:33:33:1215:0,0:0,0:0,-9.93399,-10,-9.93399,-10,-10 0|0:99:42:42:1509:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:30:30:1104:0,0:0,0:0,-9.0309,-10,-9.0309,-10,-10 0|0:96.2785:20:20:748:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:90.2594:18:18:666:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:99:39:39:1336:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:90.2594:18:18:664:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:66.1775:10:10:377:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:84.2392:16:16:575:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:81.229:15:15:549:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:96.2785:20:20:749:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:96.2785:20:20:744:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:69.1878:11:11:371:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:99:46:46:1693:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:38:38:1407:0,0:0,0:0,-10,-10,-10,-10,-10 0|1:99:21:11:398:10,0:379,0:-10,0,-10,-10,-10,-10 0|0:99:59:59:2169:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:34:34:1208:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:23:23:858:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:99:38:38:1417:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:42:42:1528:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:24:24:878:0,0:0,0:0,-7.22472,-10,-7.22472,-10,-10 0|0:99:46:46:1683:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:31:31:1085:0,0:0,0:0,-9.33193,-10,-9.33193,-10,-10 0|0:99:23:23:865:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:99:45:45:1550:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:93.2692:19:19:712:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:99:56:56:2057:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:84.2392:16:16:598:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:69.1878:11:11:393:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:99:76:76:2736:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:87.2494:17:17:633:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:99:48:48:1736:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:96.2785:20:20:729:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:99:21:21:774:0,0:0,0:0,-6.32163,-10,-6.32163,-10,-10 0|0:72.1981:12:12:439:0,0:0,0:0,-3.61236,-10,-3.61236,-10,-10 0|0:99:38:37:1343:0,1:0,25:0,-10,-10,-7.35936,-10,-10 0|0:99:25:25:905:0,0:0,0:0,-7.52575,-10,-7.52575,-10,-10 0|0:99:61:61:2181:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:93.2692:19:19:713:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:69.1878:11:11:417:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:99:40:40:1455:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:31:31:1114:0,0:0,0:0,-9.33193,-10,-9.33193,-10,-10 0|0:75.2084:13:13:466:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:99:48:48:1793:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:93.2692:19:19:698:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:87.2494:17:17:616:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:99:50:50:1848:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:38:38:1364:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:34:34:1218:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:50:50:1838:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:87.2494:17:17:547:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:81.5261:23:22:789:1,0:16,0:0,-3.96196,-10,-6.62266,-10,-10 0|0:99:26:26:923:0,0:0,0:0,-7.82678,-10,-7.82678,-10,-10 0|0:84.2392:16:16:585:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:90.2594:18:18:641:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:99:64:64:2349:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:41:41:1498:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:32:32:1167:0,0:0,0:0,-9.63296,-10,-9.63296,-10,-10 0|1:99:33:20:737:13,0:444,0:-10,0,-10,-10,-10,-10 0|0:99:39:39:1440:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:72.1981:12:12:427:0,0:0,0:0,-3.61236,-10,-3.61236,-10,-10 0|0:99:27:27:1013:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:93.2692:19:19:691:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:54.1363:6:6:223:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|0:99:46:46:1705:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:39:39:1402:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:96.2785:20:20:748:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 scaffold_56 992348 . C T 725.95 . AB=0.473684;ABP=3.35316;AC=2;AF=0.0108696;AN=184;AO=28;CIGAR=1X;DP=2701;DPB=2701;DPRA=0.870554;EPP=5.80219;EPPR=10.3475;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9592;NS=92;NUMALT=1;ODDS=13.1482;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1035;QR=97599;RO=2671;RPP=63.8115;RPPR=5803.01;RUN=1;SAF=17;SAP=5.80219;SAR=11;SRF=1383;SRP=10.3475;SRR=1288;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:84.1945:15:15:530:0:0:0,-4.51545,-10 0/0:99:20:20:742:0:0:0,-6.0206,-10 0/0:93.2239:18:18:656:0:0:0,-5.41854,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/0:96.2325:19:19:678:0:0:0,-5.71957,-10 0/0:99:37:37:1376:0:0:0,-10,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:90.2144:17:17:637:0:0:0,-5.11751,-10 0/0:60.1123:7:7:265:0:0:0,-2.10721,-10 0/0:87.2051:16:16:585:0:0:0,-4.81648,-10 0/0:69.1432:10:10:357:0:0:0,-3.0103,-10 0/0:99:40:40:1493:0:0:0,-10,-10 0/0:99:43:43:1525:0:0:0,-10,-10 0/0:99:41:41:1500:0:0:0,-10,-10 0/0:99:42:42:1582:0:0:0,-10,-10 0/0:99:33:33:1182:0:0:0,-9.93399,-10 0/0:90.2144:17:17:633:0:0:0,-5.11751,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:99:45:45:1681:0:0:0,-10,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:99:52:52:1928:0:0:0,-10,-10 0/0:72.9691:20:19:690:1:16:0,-3.11957,-10 0/0:99:36:35:1283:0:0:0,-10,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:99:42:42:1559:0:0:0,-10,-10 0/0:99:30:29:1072:0:0:0,-8.72987,-10 0/0:99:20:20:728:0:0:0,-6.0206,-10 0/0:93.2239:18:18:672:0:0:0,-5.41854,-10 0/0:99:39:39:1381:0:0:0,-10,-10 0/0:93.2239:18:18:669:0:0:0,-5.41854,-10 0/0:69.1432:10:10:354:0:0:0,-3.0103,-10 0/0:87.2051:16:16:573:0:0:0,-4.81648,-10 0/0:84.1945:15:15:568:0:0:0,-4.51545,-10 0/0:99:20:20:747:0:0:0,-6.0206,-10 0/0:99:20:20:721:0:0:0,-6.0206,-10 0/0:72.1535:11:11:347:0:0:0,-3.31133,-10 0/0:99:46:46:1733:0:0:0,-10,-10 0/0:99:38:38:1387:0:0:0,-10,-10 0/0:99:21:21:793:0:0:0,-6.32163,-10 0/0:99:59:59:2212:0:0:0,-10,-10 0/0:99:34:34:1221:0:0:0,-10,-10 0/0:99:23:23:855:0:0:0,-6.92369,-10 0/0:99:38:38:1353:0:0:0,-10,-10 0/0:99:42:42:1551:0:0:0,-10,-10 0/0:99:24:24:865:0:0:0,-7.22472,-10 0/0:99:46:46:1711:0:0:0,-10,-10 0/0:99:31:31:1110:0:0:0,-9.33193,-10 0/0:99:23:23:850:0:0:0,-6.92369,-10 0/0:99:45:45:1615:0:0:0,-10,-10 0/0:96.2325:19:19:714:0:0:0,-5.71957,-10 0/0:99:56:56:2046:0:0:0,-10,-10 0/0:87.2051:16:16:599:0:0:0,-4.81648,-10 0/0:72.1535:11:11:405:0:0:0,-3.31133,-10 0/0:99:76:76:2770:0:0:0,-10,-10 0/0:90.2144:17:17:630:0:0:0,-5.11751,-10 0/0:99:48:48:1785:0:0:0,-10,-10 0/0:99:20:20:718:0:0:0,-6.0206,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:75.1638:12:12:424:0:0:0,-3.61236,-10 0/1:99:38:21:766:17:639:-10,0,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:99:61:61:2123:0:0:0,-10,-10 0/1:99:19:9:337:10:380:-10,0,-10 0/0:72.1535:11:11:416:0:0:0,-3.31133,-10 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:99:31:31:1123:0:0:0,-9.33193,-10 0/0:78.174:13:13:419:0:0:0,-3.91339,-10 0/0:99:48:48:1741:0:0:0,-10,-10 0/0:96.2325:19:19:656:0:0:0,-5.71957,-10 0/0:90.2144:17:17:634:0:0:0,-5.11751,-10 0/0:99:50:50:1836:0:0:0,-10,-10 0/0:99:38:38:1406:0:0:0,-10,-10 0/0:99:34:34:1234:0:0:0,-10,-10 0/0:99:50:50:1833:0:0:0,-10,-10 0/0:90.2144:17:17:629:0:0:0,-5.11751,-10 0/0:99:23:23:819:0:0:0,-6.92369,-10 0/0:99:26:26:966:0:0:0,-7.82678,-10 0/0:87.2051:16:16:593:0:0:0,-4.81648,-10 0/0:93.2239:18:18:646:0:0:0,-5.41854,-10 0/0:99:64:64:2343:0:0:0,-10,-10 0/0:99:41:41:1493:0:0:0,-10,-10 0/0:99:32:32:1131:0:0:0,-9.63296,-10 0/0:99:33:33:1192:0:0:0,-9.93399,-10 0/0:99:39:39:1418:0:0:0,-10,-10 0/0:75.1638:12:12:426:0:0:0,-3.61236,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:96.2325:19:19:708:0:0:0,-5.71957,-10 0/0:57.102:6:6:205:0:0:0,-1.80618,-10 0/0:99:46:46:1712:0:0:0,-10,-10 0/0:99:39:39:1420:0:0:0,-10,-10 0/0:99:20:20:739:0:0:0,-6.0206,-10 scaffold_56 1107647 . C T 739.758 . AB=0.227545;ABP=110.687;AC=5;AF=0.0271739;AN=184;AO=41;CIGAR=1X;DP=4013;DPB=4013;DPRA=0.897484;EPP=3.06326;EPPR=3.25145;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9834;NS=92;NUMALT=1;ODDS=9.09412;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1505;QR=143169;RO=3971;RPP=60.6867;RPPR=99.9315;RUN=1;SAF=25;SAP=7.30028;SAR=16;SRF=1998;SRP=3.35207;SRR=1973;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:38:38:1340:0:0:0,-10,-10 0/0:99:25:25:908:0:0:0,-7.52575,-10 0/0:99:55:55:2038:0:0:0,-10,-10 0/0:99:25:25:869:0:0:0,-7.52575,-10 0/0:99:27:27:935:0:0:0,-8.12781,-10 0/0:99:18:18:665:0:0:0,-5.41854,-10 0/0:99:76:75:2611:0:0:0,-10,-10 0/0:99:58:58:2075:0:0:0,-10,-10 0/0:99:32:32:1186:0:0:0,-9.63296,-10 0/0:99:12:12:436:0:0:0,-3.61236,-10 0/0:99:10:10:348:0:0:0,-3.0103,-10 0/0:99:25:25:927:0:0:0,-7.52575,-10 0/0:99:64:64:2334:0:0:0,-10,-10 0/0:99:69:69:2430:0:0:0,-10,-10 0/0:99:71:71:2606:0:0:0,-10,-10 0/1:99:32:24:795:8:300:-10,0,-10 0/1:39.4957:33:29:1061:4:152:-8.73795,0,-10 0/0:99:19:19:704:0:0:0,-5.71957,-10 0/0:99:54:54:1967:0:0:0,-10,-10 0/0:99:71:71:2558:0:0:0,-10,-10 0/0:99:45:45:1578:0:0:0,-10,-10 0/0:99:70:70:2560:0:0:0,-10,-10 0/0:99:21:21:760:0:0:0,-6.32163,-10 0/0:99:53:53:1943:0:0:0,-10,-10 0/0:99:46:45:1558:1:38:0,-8.38462,-10 0/0:99:58:58:2116:0:0:0,-10,-10 0/0:99:44:44:1606:0:0:0,-10,-10 0/0:99:40:40:1453:0:0:0,-10,-10 0/0:99:42:42:1504:0:0:0,-10,-10 0/0:99:79:79:2761:0:0:0,-10,-10 0/0:99:13:13:441:0:0:0,-3.91339,-10 0/0:99:18:18:669:0:0:0,-5.41854,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:99:31:31:1086:0:0:0,-9.33193,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:99:19:19:690:0:0:0,-5.71957,-10 0/0:99:17:17:591:0:0:0,-5.11751,-10 0/0:99:52:52:1922:0:0:0,-10,-10 0/0:99:36:36:1324:0:0:0,-10,-10 0/1:99:19:13:469:6:228:-10,0,-10 0/0:99:77:77:2788:0:0:0,-10,-10 0/0:99:50:50:1779:0:0:0,-10,-10 0/0:99:40:40:1405:0:0:0,-10,-10 0/0:99:91:91:3210:0:0:0,-10,-10 0/0:99:67:67:2434:0:0:0,-10,-10 0/0:99:42:42:1560:0:0:0,-10,-10 0/0:99:104:104:3713:0:0:0,-10,-10 0/1:99:41:33:1212:8:281:-10,0,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:99:80:80:2825:0:0:0,-10,-10 0/0:99:17:17:591:0:0:0,-5.11751,-10 0/0:99:88:88:3154:0:0:0,-10,-10 0/0:99:33:33:1243:0:0:0,-9.93399,-10 0/0:99:12:12:447:0:0:0,-3.61236,-10 0/0:99:91:91:3282:0:0:0,-10,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:99:38:38:1295:0:0:0,-10,-10 0/0:99:15:15:514:0:0:0,-4.51545,-10 0/0:99:41:41:1460:0:0:0,-10,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:99:70:70:2524:0:0:0,-10,-10 0/0:99:41:41:1496:0:0:0,-10,-10 0/0:99:107:107:3861:0:0:0,-10,-10 0/0:99:45:45:1658:0:0:0,-10,-10 0/0:99:14:14:468:0:0:0,-4.21442,-10 0/0:99:59:58:2130:1:16:0,-10,-10 0/0:99:44:43:1561:1:38:0,-7.80187,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:99:85:85:3099:0:0:0,-10,-10 0/0:99:29:29:1018:0:0:0,-8.72987,-10 0/0:99:34:34:1227:0:0:0,-10,-10 0/0:99:88:88:3259:0:0:0,-10,-10 0/0:99:68:68:2292:0:0:0,-10,-10 0/0:99:38:38:1396:0:0:0,-10,-10 0/0:99:58:58:2104:0:0:0,-10,-10 0/0:99:30:30:1042:0:0:0,-9.0309,-10 0/0:99:37:37:1319:0:0:0,-10,-10 0/0:99:25:25:901:0:0:0,-7.52575,-10 0/0:99:16:16:602:0:0:0,-4.81648,-10 0/0:99:26:26:942:0:0:0,-7.82678,-10 0/0:99:75:75:2750:0:0:0,-10,-10 0/1:99:42:30:1074:12:452:-10,0,-10 0/0:99:61:61:2235:0:0:0,-10,-10 0/0:99:44:44:1618:0:0:0,-10,-10 0/0:99:40:40:1468:0:0:0,-10,-10 0/0:99:8:8:297:0:0:0,-2.40824,-10 0/0:99:39:39:1374:0:0:0,-10,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:99:10:10:376:0:0:0,-3.0103,-10 0/0:99:45:45:1688:0:0:0,-10,-10 0/0:99:40:40:1451:0:0:0,-10,-10 0/0:99:35:35:1249:0:0:0,-10,-10 scaffold_56 1107652 . G A 1252.81 . AB=0.657534;ABP=18.746;AC=3;AF=0.0163043;AN=184;AO=49;CIGAR=1X;DP=1822;DPB=1822;DPRA=1.35897;EPP=6.59988;EPPR=7.27364;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.978;NS=92;NUMALT=1;ODDS=2.91436;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1771;QR=64242;RO=1773;RPP=92.7497;RPPR=3455.62;RUN=1;SAF=22;SAP=4.11819;SAR=27;SRF=902;SRP=4.18728;SRR=871;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.533:17:17:622:0:0:0,-5.11751,-10 0/0:40.4815:12:12:453:0:0:0,-3.61236,-10 0/0:64.5639:20:20:733:0:0:0,-6.0206,-10 0/0:37.4712:11:11:383:0:0:0,-3.31133,-10 0/0:46.5021:14:14:507:0:0:0,-4.21442,-10 0/0:34.4609:10:10:355:0:0:0,-3.0103,-10 0/0:99:42:42:1466:0:0:0,-10,-10 0/1:99:28:12:441:16:592:-10,0,-10 0/0:61.5536:19:19:697:0:0:0,-5.71957,-10 0/0:22.4197:6:6:213:0:0:0,-1.80618,-10 0/0:16.3991:4:4:150:0:0:0,-1.20412,-10 0/0:34.4609:10:10:371:0:0:0,-3.0103,-10 0/0:52.9172:33:32:1172:1:38:0,-4.61548,-10 0/0:99:42:42:1495:0:0:0,-10,-10 0/0:99:39:39:1436:0:0:0,-10,-10 0/0:67.5742:21:21:723:0:0:0,-6.32163,-10 0/0:70.5845:22:22:829:0:0:0,-6.62266,-10 0/0:25.43:7:7:260:0:0:0,-2.10721,-10 0/0:70.5845:22:22:801:0:0:0,-6.62266,-10 0/0:76.6051:24:24:869:0:0:0,-7.22472,-10 0/0:73.5948:23:23:813:0:0:0,-6.92369,-10 0/0:91.6549:29:29:1042:0:0:0,-8.72987,-10 0/0:43.4918:13:13:473:0:0:0,-3.91339,-10 0/0:88.6462:28:28:1038:0:0:0,-8.42884,-10 0/0:52.5227:16:16:592:0:0:0,-4.81648,-10 0/0:70.5845:22:22:790:0:0:0,-6.62266,-10 0/0:55.533:17:17:622:0:0:0,-5.11751,-10 0/0:64.5639:20:20:741:0:0:0,-6.0206,-10 0/0:70.5845:22:22:794:0:0:0,-6.62266,-10 0/0:99:32:32:1164:0:0:0,-9.63296,-10 0/0:25.43:7:7:257:0:0:0,-2.10721,-10 0/0:31.4506:9:9:318:0:0:0,-2.70927,-10 0/0:49.5124:15:15:553:0:0:0,-4.51545,-10 0/0:43.4918:13:13:432:0:0:0,-3.91339,-10 0/0:58.5433:18:18:668:0:0:0,-5.41854,-10 0/1:0.122516:11:0:0:11:387:-10,-3.31133,0 0/0:28.4403:8:8:290:0:0:0,-2.40824,-10 0/0:85.6356:27:27:998:0:0:0,-8.12781,-10 0/0:37.4712:11:11:415:0:0:0,-3.31133,-10 0/0:46.5021:14:14:495:0:0:0,-4.21442,-10 0/1:99:34:13:489:21:754:-10,0,-10 0/0:79.6154:25:25:885:0:0:0,-7.52575,-10 0/0:43.4918:13:13:488:0:0:0,-3.91339,-10 0/0:99:35:35:1220:0:0:0,-10,-10 0/0:97.6762:31:31:1091:0:0:0,-9.33193,-10 0/0:79.6154:25:25:877:0:0:0,-7.52575,-10 0/0:99:49:49:1803:0:0:0,-10,-10 0/0:76.6051:24:24:888:0:0:0,-7.22472,-10 0/0:55.533:17:17:645:0:0:0,-5.11751,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:37.4712:11:11:381:0:0:0,-3.31133,-10 0/0:91.6549:29:29:997:0:0:0,-8.72987,-10 0/0:34.4609:10:10:376:0:0:0,-3.0103,-10 0/0:13.3888:3:3:114:0:0:0,-0.90309,-10 0/0:99:50:50:1822:0:0:0,-10,-10 0/0:31.4506:9:9:333:0:0:0,-2.70927,-10 0/0:55.533:17:17:635:0:0:0,-5.11751,-10 0/0:22.4197:6:6:217:0:0:0,-1.80618,-10 0/0:55.533:17:17:570:0:0:0,-5.11751,-10 0/0:31.4506:9:9:332:0:0:0,-2.70927,-10 0/0:97.6762:31:31:1154:0:0:0,-9.33193,-10 0/0:46.5021:14:14:515:0:0:0,-4.21442,-10 0/0:99:47:47:1676:0:0:0,-10,-10 0/0:76.6051:24:24:834:0:0:0,-7.22472,-10 0/0:31.4506:9:9:308:0:0:0,-2.70927,-10 0/0:85.6356:27:27:1005:0:0:0,-8.12781,-10 0/0:70.5845:22:22:824:0:0:0,-6.62266,-10 0/0:28.4403:8:8:294:0:0:0,-2.40824,-10 0/0:99:35:35:1285:0:0:0,-10,-10 0/0:43.4918:13:13:418:0:0:0,-3.91339,-10 0/0:43.4918:13:13:463:0:0:0,-3.91339,-10 0/0:99:37:37:1359:0:0:0,-10,-10 0/0:99:37:37:1362:0:0:0,-10,-10 0/0:55.533:17:17:622:0:0:0,-5.11751,-10 0/0:88.6462:28:28:1027:0:0:0,-8.42884,-10 0/0:37.4712:11:11:357:0:0:0,-3.31133,-10 0/0:37.4712:11:11:417:0:0:0,-3.31133,-10 0/0:28.4403:8:8:299:0:0:0,-2.40824,-10 0/0:25.43:7:7:266:0:0:0,-2.10721,-10 0/0:37.4712:11:11:417:0:0:0,-3.31133,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:91.6549:29:29:1084:0:0:0,-8.72987,-10 0/0:70.5845:22:22:762:0:0:0,-6.62266,-10 0/0:70.5845:22:22:781:0:0:0,-6.62266,-10 0/0:49.5124:15:15:564:0:0:0,-4.51545,-10 0/0:16.3991:4:4:150:0:0:0,-1.20412,-10 0/0:43.4918:13:13:445:0:0:0,-3.91339,-10 0/0:52.5227:16:16:571:0:0:0,-4.81648,-10 0/0:22.4197:6:6:228:0:0:0,-1.80618,-10 0/0:43.4918:13:13:485:0:0:0,-3.91339,-10 0/0:55.533:17:17:619:0:0:0,-5.11751,-10 0/0:58.5433:18:18:637:0:0:0,-5.41854,-10 scaffold_56 1107690 . A G 2702.87 . AB=0.514706;ABP=3.26577;AC=10;AF=0.0543478;AN=184;AO=102;CIGAR=1X;DP=1823;DPB=1823;DPRA=1.07285;EPP=4.37279;EPPR=3.0305;GTI=0;LEN=1;MEANALT=1.125;MQM=60;MQMR=59.9773;NS=92;NUMALT=1;ODDS=0.845716;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3736;QR=63110;RO=1720;RPP=224.5;RPPR=3737.94;RUN=1;SAF=55;SAP=4.37279;SAR=47;SRF=862;SRP=3.0305;SRR=858;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:66.7943:17:17:628:0:0:0,-5.11751,-10 0/0:51.7428:12:12:427:0:0:0,-3.61236,-10 0/0:69.8046:18:18:669:0:0:0,-5.41854,-10 0/0:48.7325:11:11:405:0:0:0,-3.31133,-10 0/0:57.7634:14:14:516:0:0:0,-4.21442,-10 0/0:45.7222:10:10:364:0:0:0,-3.0103,-10 0/0:99:44:44:1590:0:0:0,-10,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 0/0:72.8149:19:19:711:0:0:0,-5.71957,-10 0/0:33.681:6:6:225:0:0:0,-1.80618,-10 0/0:27.6604:4:4:149:0:0:0,-1.20412,-10 0/0:48.7325:11:11:418:0:0:0,-3.31133,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:99:43:43:1579:0:0:0,-10,-10 0/0:99:39:39:1421:0:0:0,-10,-10 0/0:78.8355:21:21:764:0:0:0,-6.32163,-10 0/0:75.8252:20:20:735:0:0:0,-6.0206,-10 0/0:39.7016:8:8:288:0:0:0,-2.40824,-10 0/0:81.8457:22:22:794:0:0:0,-6.62266,-10 0/0:87.866:24:24:908:0:0:0,-7.22472,-10 0/0:84.8559:23:23:836:0:0:0,-6.92369,-10 0/0:99:29:29:1073:0:0:0,-8.72987,-10 0/0:54.7531:13:13:484:0:0:0,-3.91339,-10 0/1:99:28:14:529:14:519:-10,0,-10 0/0:63.784:16:16:571:0:0:0,-4.81648,-10 0/0:81.8457:22:22:822:0:0:0,-6.62266,-10 0/0:66.7943:17:17:620:0:0:0,-5.11751,-10 0/0:75.8252:20:20:705:0:0:0,-6.0206,-10 0/0:81.8457:22:22:810:0:0:0,-6.62266,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:36.6913:7:7:255:0:0:0,-2.10721,-10 0/0:42.7119:9:9:340:0:0:0,-2.70927,-10 0/0:60.7737:15:15:555:0:0:0,-4.51545,-10 0/0:54.7531:13:13:460:0:0:0,-3.91339,-10 0/0:69.8046:18:18:668:0:0:0,-5.41854,-10 0/1:5.48914:11:10:366:1:38:-1.53006,0,-10 0/0:39.7016:8:8:300:0:0:0,-2.40824,-10 0/0:96.8939:27:27:1002:0:0:0,-8.12781,-10 0/0:51.7428:12:12:456:0:0:0,-3.61236,-10 0/0:57.7634:14:14:482:0:0:0,-4.21442,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:90.8759:25:25:925:0:0:0,-7.52575,-10 0/0:54.7531:13:13:490:0:0:0,-3.91339,-10 0/0:99:35:35:1225:0:0:0,-10,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:90.8759:25:25:922:0:0:0,-7.52575,-10 0/0:99:49:49:1838:0:0:0,-10,-10 0/1:99:24:8:294:16:562:-10,0,-10 1/1:20.0141:17:0:0:17:637:-10,-5.11751,0 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:48.7325:11:11:418:0:0:0,-3.31133,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:45.7222:10:10:380:0:0:0,-3.0103,-10 0/0:24.6501:3:3:114:0:0:0,-0.90309,-10 0/0:99:50:50:1855:0:0:0,-10,-10 0/0:42.7119:9:9:338:0:0:0,-2.70927,-10 0/1:99:17:7:262:10:379:-10,0,-10 0/0:33.681:6:6:206:0:0:0,-1.80618,-10 0/0:66.7943:17:17:591:0:0:0,-5.11751,-10 0/0:42.7119:9:9:319:0:0:0,-2.70927,-10 0/1:99:31:17:613:14:528:-10,0,-10 0/0:57.7634:14:14:479:0:0:0,-4.21442,-10 0/0:99:47:47:1668:0:0:0,-10,-10 0/1:99:25:10:367:15:539:-10,0,-10 0/0:42.7119:9:9:333:0:0:0,-2.70927,-10 0/0:96.8939:27:27:1012:0:0:0,-8.12781,-10 0/0:81.8457:22:22:829:0:0:0,-6.62266,-10 0/0:39.7016:8:8:295:0:0:0,-2.40824,-10 0/0:99:35:35:1314:0:0:0,-10,-10 0/0:54.7531:13:13:447:0:0:0,-3.91339,-10 0/0:54.7531:13:13:478:0:0:0,-3.91339,-10 0/0:99:37:37:1367:0:0:0,-10,-10 0/0:99:37:37:1380:0:0:0,-10,-10 0/0:66.7943:17:17:608:0:0:0,-5.11751,-10 0/0:99:28:28:1053:0:0:0,-8.42884,-10 0/0:48.7325:11:11:388:0:0:0,-3.31133,-10 0/0:48.7325:11:11:394:0:0:0,-3.31133,-10 0/0:39.7016:8:8:303:0:0:0,-2.40824,-10 0/0:36.6913:7:7:244:0:0:0,-2.10721,-10 0/0:48.7325:11:11:418:0:0:0,-3.31133,-10 0/0:99:32:32:1190:0:0:0,-9.63296,-10 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:78.8355:21:21:766:0:0:0,-6.32163,-10 0/0:78.8355:21:21:743:0:0:0,-6.32163,-10 0/0:60.7737:15:15:562:0:0:0,-4.51545,-10 0/0:27.6604:4:4:147:0:0:0,-1.20412,-10 0/0:54.7531:13:13:474:0:0:0,-3.91339,-10 1/1:13.9935:16:0:0:15:534:-10,-4.51545,0 0/0:33.681:6:6:228:0:0:0,-1.80618,-10 0/0:54.7531:13:13:492:0:0:0,-3.91339,-10 0/0:66.7943:17:17:627:0:0:0,-5.11751,-10 0/0:69.8046:18:18:635:0:0:0,-5.41854,-10 scaffold_56 1195544 . A G 3802.79 . AB=0.337662;ABP=20.6359;AC=12;AF=0.0652174;AN=184;AO=151;CIGAR=1X;DP=2027;DPB=2027;DPRA=1.387;EPP=3.13973;EPPR=10.6087;GTI=0;LEN=1;MEANALT=1.11111;MQM=59.8675;MQMR=59.9797;NS=92;NUMALT=1;ODDS=0.210873;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5334;QR=69232;RO=1875;RPP=330.903;RPPR=4074.52;RUN=1;SAF=77;SAP=3.13973;SAR=74;SRF=897;SRP=10.6087;SRR=978;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:22.4666:7:7:266:0:0:0,-2.10721,-10 0/0:40.5284:13:13:490:0:0:0,-3.91339,-10 0/0:61.6005:20:20:754:0:0:0,-6.0206,-10 0/0:22.4666:7:7:266:0:0:0,-2.10721,-10 0/0:31.4975:10:10:366:0:0:0,-3.0103,-10 0/0:37.5181:12:12:454:0:0:0,-3.61236,-10 0/0:97.7211:32:32:1194:0:0:0,-9.63296,-10 0/0:99:40:40:1455:0:0:0,-10,-10 0/0:40.5284:13:13:473:0:0:0,-3.91339,-10 0/0:28.4872:9:9:318:0:0:0,-2.70927,-10 0/0:37.5181:12:12:450:0:0:0,-3.61236,-10 0/0:19.4563:6:6:227:0:0:0,-1.80618,-10 0/1:99:39:25:904:14:460:-10,0,-10 0/0:99:34:34:1249:0:0:0,-10,-10 0/0:99:38:38:1413:0:0:0,-10,-10 0/0:97.7211:32:32:1202:0:0:0,-9.63296,-10 0/0:79.6623:26:26:959:0:0:0,-7.82678,-10 0/0:28.4872:9:9:337:0:0:0,-2.70927,-10 0/0:61.6005:20:20:753:0:0:0,-6.0206,-10 0/0:99:35:35:1292:0:0:0,-10,-10 0/0:88.6929:29:29:1078:0:0:0,-8.72987,-10 0/0:94.7123:31:31:1132:0:0:0,-9.33193,-10 0/0:34.5078:11:11:397:0:0:0,-3.31133,-10 0/0:79.6623:26:26:967:0:0:0,-7.82678,-10 0/0:61.6005:20:20:748:0:0:0,-6.0206,-10 0/0:61.6005:20:20:732:0:0:0,-6.0206,-10 0/0:79.6623:26:26:971:0:0:0,-7.82678,-10 0/0:49.5593:16:16:575:0:0:0,-4.81648,-10 0/0:49.5593:16:16:583:0:0:0,-4.81648,-10 0/0:91.7028:30:30:1092:0:0:0,-9.0309,-10 0/0:46.549:15:15:556:0:0:0,-4.51545,-10 0/0:34.5078:11:11:416:0:0:0,-3.31133,-10 0/0:22.4606:23:22:822:1:38:0,-1.76196,-10 0/0:46.549:15:15:555:0:0:0,-4.51545,-10 0/0:73.6417:24:24:880:0:0:0,-7.22472,-10 0/0:22.4666:7:7:265:0:0:0,-2.10721,-10 0/0:31.4975:10:10:379:0:0:0,-3.0103,-10 0/0:91.7028:30:30:1091:0:0:0,-9.0309,-10 0/0:37.5181:12:12:453:0:0:0,-3.61236,-10 0/0:52.5696:17:17:618:0:0:0,-5.11751,-10 0/0:99:35:35:1256:0:0:0,-10,-10 0/0:88.6929:29:29:1044:0:0:0,-8.72987,-10 0/0:58.5902:19:19:718:0:0:0,-5.71957,-10 0/0:64.6108:21:21:775:0:0:0,-6.32163,-10 0/0:99:37:37:1381:0:0:0,-10,-10 0/0:61.6005:20:20:735:0:0:0,-6.0206,-10 0/0:91.7028:30:30:1096:0:0:0,-9.0309,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/0:46.549:15:15:537:0:0:0,-4.51545,-10 0/0:99:56:56:2082:0:0:0,-10,-10 0/0:67.6211:22:22:811:0:0:0,-6.62266,-10 0/0:99:38:38:1400:0:0:0,-10,-10 0/0:64.6108:21:21:782:0:0:0,-6.32163,-10 0/0:25.4769:8:8:292:0:0:0,-2.40824,-10 0/0:99:33:33:1227:0:0:0,-9.93399,-10 0/0:31.4975:10:10:376:0:0:0,-3.0103,-10 0/0:64.6108:21:21:728:0:0:0,-6.32163,-10 0/0:43.5387:14:14:506:0:0:0,-4.21442,-10 0/0:52.5696:17:17:644:0:0:0,-5.11751,-10 0/0:61.6005:20:20:739:0:0:0,-6.0206,-10 0/0:99:42:42:1554:0:0:0,-10,-10 0/0:85.6827:28:28:1047:0:0:0,-8.42884,-10 0/0:99:34:34:1231:0:0:0,-10,-10 0/0:46.549:15:15:558:0:0:0,-4.51545,-10 0/0:70.6314:23:23:864:0:0:0,-6.92369,-10 0/0:70.8872:40:39:1449:1:38:0,-6.63914,-10 0/0:70.6314:23:23:828:0:0:0,-6.92369,-10 0/0:40.5284:13:13:482:0:0:0,-3.91339,-10 0/1:99:38:26:966:12:398:-10,0,-10 0/0:58.5902:19:19:712:0:0:0,-5.71957,-10 1/1:27.8547:24:0:0:24:817:-10,-7.22472,0 1/1:24.1989:32:1:16:31:1115:-10,-6.52781,0 1/1:33.8753:26:0:0:26:946:-10,-7.82678,0 1/1:3.77228:16:0:0:16:570:-10,-4.81648,0 1/1:33.8753:27:0:0:26:952:-10,-7.82678,0 0/0:31.4975:10:10:374:0:0:0,-3.0103,-10 0/0:49.5593:16:16:599:0:0:0,-4.81648,-10 0/0:58.5902:19:19:693:0:0:0,-5.71957,-10 0/0:19.4563:6:6:219:0:0:0,-1.80618,-10 0/0:40.5284:13:13:471:0:0:0,-3.91339,-10 0/0:94.7123:31:31:1152:0:0:0,-9.33193,-10 0/0:94.7123:31:31:1120:0:0:0,-9.33193,-10 0/0:67.6211:22:22:833:0:0:0,-6.62266,-10 0/0:79.6623:26:26:982:0:0:0,-7.82678,-10 0/0:64.6108:21:21:757:0:0:0,-6.32163,-10 0/0:34.5078:11:11:395:0:0:0,-3.31133,-10 0/0:52.5696:17:17:646:0:0:0,-5.11751,-10 0/0:52.5696:17:17:637:0:0:0,-5.11751,-10 0/0:37.5181:12:12:455:0:0:0,-3.61236,-10 0/0:82.6725:27:27:989:0:0:0,-8.12781,-10 0/0:73.6417:24:24:901:0:0:0,-7.22472,-10 0/0:52.5696:17:17:643:0:0:0,-5.11751,-10 scaffold_56 1195546 . T C 23136.7 . AB=0.528785;ABP=6.38557;AC=71;AF=0.38587;AN=184;AO=813;CIGAR=1X;DP=2026;DPB=2026;DPRA=1.15062;EPP=12.3078;EPPR=3.52851;GTI=0;LEN=1;MEANALT=1;MQM=59.9779;MQMR=59.967;NS=92;NUMALT=1;ODDS=1.73892;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=29573;QR=44247;RO=1211;RPP=1768.42;RPPR=2632.66;RUN=1;SAF=377;SAP=12.3078;SAR=436;SRF=597;SRP=3.52851;SRR=614;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:11.1214:7:0:0:7:256:-10,-2.10721,0 0/0:31.5317:13:13:492:0:0:0,-3.91339,-10 0/1:99:20:10:354:10:379:-10,0,-10 0/0:13.4699:7:7:264:0:0:0,-2.10721,-10 0/0:22.5008:10:10:359:0:0:0,-3.0103,-10 1/1:26.1729:12:0:0:12:444:-10,-3.61236,0 0/0:88.7267:32:32:1206:0:0:0,-9.63296,-10 0/0:99:40:40:1441:0:0:0,-10,-10 1/1:29.1832:13:0:0:13:450:-10,-3.91339,0 0/0:19.4905:9:9:332:0:0:0,-2.70927,-10 0/0:28.5214:12:12:444:0:0:0,-3.61236,-10 0/0:10.4596:6:6:228:0:0:0,-1.80618,-10 0/0:99:39:39:1406:0:0:0,-10,-10 0/0:94.7483:34:34:1246:0:0:0,-10,-10 0/1:99:38:17:621:21:724:-10,0,-10 0/1:99:32:14:521:18:658:-10,0,-10 0/1:99:26:13:465:13:477:-10,0,-10 0/0:19.4905:9:9:320:0:0:0,-2.70927,-10 0/1:99:20:14:529:6:202:-10,0,-10 0/0:97.7588:35:35:1264:0:0:0,-10,-10 1/1:77.3479:29:0:0:29:1082:-10,-8.72987,0 0/0:85.7171:31:31:1080:0:0:0,-9.33193,-10 1/1:23.1626:11:0:0:11:381:-10,-3.31133,0 0/0:70.6656:26:26:950:0:0:0,-7.82678,-10 0/0:52.6038:20:20:743:0:0:0,-6.0206,-10 1/1:50.2553:20:0:0:20:736:-10,-6.0206,0 1/1:68.317:26:0:0:26:954:-10,-7.82678,0 1/1:38.2141:16:0:0:16:537:-10,-4.81648,0 0/0:40.5626:16:16:552:0:0:0,-4.81648,-10 0/1:99:30:11:415:19:708:-10,0,-10 0/0:37.5523:15:15:555:0:0:0,-4.51545,-10 0/0:25.5111:11:11:417:0:0:0,-3.31133,-10 1/1:59.2862:23:0:0:23:852:-10,-6.92369,0 0/0:37.5523:15:15:558:0:0:0,-4.51545,-10 0/0:61.6347:24:23:810:0:0:0,-6.92369,-10 1/1:11.1214:7:0:0:7:266:-10,-2.10721,0 0/0:22.5008:10:10:364:0:0:0,-3.0103,-10 0/0:82.7068:30:30:1095:0:0:0,-9.0309,-10 0/0:28.5214:12:12:428:0:0:0,-3.61236,-10 0/1:99:17:10:352:7:241:-10,0,-10 0/0:97.7588:35:35:1274:0:0:0,-10,-10 0/0:29.5421:29:28:968:1:38:0,-3.46747,-10 1/1:47.245:19:0:0:19:699:-10,-5.71957,0 0/0:55.6141:21:21:795:0:0:0,-6.32163,-10 1/1:99:37:0:0:37:1353:-10,-10,0 1/1:50.2553:20:0:0:20:734:-10,-6.0206,0 1/1:80.3582:30:0:0:30:1069:-10,-9.0309,0 0/0:99:38:38:1397:0:0:0,-10,-10 0/0:37.5523:15:15:536:0:0:0,-4.51545,-10 1/1:99:56:0:0:56:1998:-10,-10,0 1/1:56.2759:22:0:0:22:803:-10,-6.62266,0 0/1:99:38:19:696:19:687:-10,0,-10 0/0:55.6141:21:21:791:0:0:0,-6.32163,-10 1/1:14.1317:8:0:0:8:280:-10,-2.40824,0 1/1:89.3884:33:0:0:33:1204:-10,-9.93399,0 0/0:22.5008:10:10:373:0:0:0,-3.0103,-10 0/0:55.6141:21:21:745:0:0:0,-6.32163,-10 1/1:32.1935:14:0:0:14:508:-10,-4.21442,0 0/0:43.5729:17:17:638:0:0:0,-5.11751,-10 0/0:52.6038:20:20:744:0:0:0,-6.0206,-10 0/1:99:42:18:674:24:856:-10,0,-10 0/0:76.6862:28:28:1047:0:0:0,-8.42884,-10 0/1:99:34:10:356:24:883:-10,0,-10 0/1:99:15:7:241:8:302:-10,0,-10 0/0:58.6244:23:22:832:0:0:0,-6.62266,-10 1/1:99:40:0:0:40:1456:-10,-10,0 0/1:99:23:13:483:10:378:-10,0,-10 0/0:31.5317:13:13:457:0:0:0,-3.91339,-10 0/0:99:38:38:1387:0:0:0,-10,-10 0/0:49.5935:19:19:708:0:0:0,-5.71957,-10 0/0:64.645:24:24:856:0:0:0,-7.22472,-10 0/0:88.7267:32:32:1161:0:0:0,-9.63296,-10 0/0:70.6656:26:26:978:0:0:0,-7.82678,-10 0/0:37.5523:15:15:507:0:0:0,-4.51545,-10 0/0:73.6759:27:27:978:0:0:0,-8.12781,-10 0/0:22.5008:10:10:369:0:0:0,-3.0103,-10 1/1:38.2141:16:0:0:16:575:-10,-4.81648,0 1/1:47.245:19:0:0:19:695:-10,-5.71957,0 0/0:10.4596:6:6:223:0:0:0,-1.80618,-10 1/1:29.1832:13:0:0:13:481:-10,-3.91339,0 0/1:99:31:18:650:13:492:-10,0,-10 0/1:99:31:16:604:15:531:-10,0,-10 0/1:99:22:11:415:11:410:-10,0,-10 0/1:99:26:13:489:13:491:-10,0,-10 0/0:55.6141:21:21:776:0:0:0,-6.32163,-10 0/0:25.5111:11:11:408:0:0:0,-3.31133,-10 1/1:41.2244:17:0:0:17:621:-10,-5.11751,0 0/0:43.5729:17:17:614:0:0:0,-5.11751,-10 1/1:26.1729:12:0:0:12:445:-10,-3.61236,0 1/1:71.3274:27:0:0:27:960:-10,-8.12781,0 0/1:99:24:7:266:17:636:-10,0,-10 1/1:41.2244:17:0:0:17:641:-10,-5.11751,0 scaffold_56 1195547 . C T 3689.34 . AB=0.445378;ABP=9.17801;AC=14;AF=0.076087;AN=184;AO=141;CIGAR=1X;DP=2026;DPB=2026;DPRA=1.04986;EPP=3.39531;EPPR=10.7603;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9692;NS=92;NUMALT=1;ODDS=1.83721;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5144;QR=69133;RO=1884;RPP=309.188;RPPR=4094.06;RUN=1;SAF=73;SAP=3.39531;SAR=68;SRF=901;SRP=10.7603;SRR=983;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:42.3835:7:7:266:0:0:0,-2.10721,-10 0/0:60.4453:13:13:490:0:0:0,-3.91339,-10 0/0:81.5174:20:20:739:0:0:0,-6.0206,-10 0/1:0.100077:7:0:0:7:263:-10,-2.10721,0 0/1:99:10:6:228:4:147:-10,0,-10 0/0:57.435:12:12:434:0:0:0,-3.61236,-10 0/0:99:32:32:1213:0:0:0,-9.63296,-10 0/0:99:40:39:1387:1:16:0,-8.83914,-10 0/0:60.4453:13:13:481:0:0:0,-3.91339,-10 0/0:48.4041:9:9:333:0:0:0,-2.70927,-10 0/0:57.435:12:12:429:0:0:0,-3.61236,-10 0/0:39.3732:6:6:225:0:0:0,-1.80618,-10 0/0:99:39:39:1416:0:0:0,-10,-10 0/0:99:34:34:1238:0:0:0,-10,-10 0/1:99:38:21:770:17:634:-10,0,-10 0/0:99:32:32:1207:0:0:0,-9.63296,-10 0/0:99:26:26:966:0:0:0,-7.82678,-10 0/0:45.3938:9:8:300:0:0:0,-2.40824,-10 0/0:81.5174:20:20:752:0:0:0,-6.0206,-10 0/0:99:35:35:1279:0:0:0,-10,-10 0/0:99:29:29:1054:0:0:0,-8.72987,-10 0/1:99:31:18:654:13:480:-10,0,-10 0/0:54.4247:11:11:387:0:0:0,-3.31133,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:81.5174:20:20:727:0:0:0,-6.0206,-10 0/0:81.5174:20:20:712:0:0:0,-6.0206,-10 0/0:99:26:26:971:0:0:0,-7.82678,-10 0/0:69.4762:16:16:591:0:0:0,-4.81648,-10 0/0:69.4762:16:16:602:0:0:0,-4.81648,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:41.1582:15:14:509:1:16:0,-1.73936,-10 0/0:54.4247:11:11:414:0:0:0,-3.31133,-10 0/0:90.5481:23:23:849:0:0:0,-6.92369,-10 0/0:66.4659:15:15:564:0:0:0,-4.51545,-10 0/0:93.556:24:24:889:0:0:0,-7.22472,-10 0/0:42.3835:7:7:266:0:0:0,-2.10721,-10 0/0:51.4144:10:10:373:0:0:0,-3.0103,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 1/1:8.78027:12:0:0:12:444:-10,-3.61236,0 0/0:72.4865:17:17:617:0:0:0,-5.11751,-10 0/0:99:35:35:1237:0:0:0,-10,-10 0/0:99:29:29:1036:0:0:0,-8.72987,-10 0/0:30.1728:19:18:682:1:38:0,-0.640816,-10 0/0:84.5276:21:21:776:0:0:0,-6.32163,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:81.5174:20:20:734:0:0:0,-6.0206,-10 0/0:99:30:30:1058:0:0:0,-9.0309,-10 0/0:99:38:38:1422:0:0:0,-10,-10 0/0:66.4659:15:15:551:0:0:0,-4.51545,-10 0/0:99:56:56:1985:0:0:0,-10,-10 0/0:87.5379:22:22:809:0:0:0,-6.62266,-10 0/0:99:38:38:1414:0:0:0,-10,-10 0/0:84.5276:21:21:785:0:0:0,-6.32163,-10 0/0:45.3938:8:8:300:0:0:0,-2.40824,-10 0/0:99:33:33:1215:0:0:0,-9.93399,-10 0/0:51.4144:10:10:380:0:0:0,-3.0103,-10 0/0:84.5276:21:21:761:0:0:0,-6.32163,-10 0/0:63.4556:14:14:501:0:0:0,-4.21442,-10 0/0:72.4865:17:17:623:0:0:0,-5.11751,-10 1/1:32.8627:20:0:0:20:726:-10,-6.0206,0 0/1:99:42:24:845:18:684:-10,0,-10 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/1:99:34:25:913:9:328:-10,0,-10 0/1:99:15:8:300:7:244:-10,0,-10 0/0:90.5481:23:23:863:0:0:0,-6.92369,-10 0/0:99:40:40:1476:0:0:0,-10,-10 0/0:90.5481:23:23:846:0:0:0,-6.92369,-10 0/0:60.4453:13:13:483:0:0:0,-3.91339,-10 0/0:99:38:38:1389:0:0:0,-10,-10 0/0:78.5071:19:19:713:0:0:0,-5.71957,-10 0/0:93.556:24:24:865:0:0:0,-7.22472,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:99:26:26:971:0:0:0,-7.82678,-10 0/0:66.4659:15:15:550:0:0:0,-4.51545,-10 0/0:99:27:27:967:0:0:0,-8.12781,-10 0/0:51.4144:10:10:375:0:0:0,-3.0103,-10 0/0:69.4762:16:16:603:0:0:0,-4.81648,-10 0/0:78.5071:19:19:710:0:0:0,-5.71957,-10 0/1:0.0497503:6:0:0:6:213:-10,-1.80618,0 0/0:60.4453:13:13:484:0:0:0,-3.91339,-10 0/1:99:31:13:491:18:645:-10,0,-10 0/0:99:31:31:1145:0:0:0,-9.33193,-10 0/0:87.5379:22:22:832:0:0:0,-6.62266,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:84.5276:21:21:743:0:0:0,-6.32163,-10 0/0:54.4247:11:11:387:0:0:0,-3.31133,-10 0/0:72.4865:17:17:644:0:0:0,-5.11751,-10 0/0:72.4865:17:17:607:0:0:0,-5.11751,-10 0/0:57.435:12:12:456:0:0:0,-3.61236,-10 0/0:99:27:27:957:0:0:0,-8.12781,-10 0/1:99:24:17:611:7:266:-10,0,-10 0/0:72.4865:17:17:637:0:0:0,-5.11751,-10 scaffold_56 1207628 . T C 59631.4 . AB=0.617647;ABP=7.09778;AC=180;AF=0.978261;AN=184;AO=1962;CIGAR=1X;DP=2020;DPB=2020;DPRA=0.482295;EPP=3.05014;EPPR=8.40154;GTI=0;LEN=1;MEANALT=1;MQM=59.9001;MQMR=59.9655;NS=92;NUMALT=1;ODDS=1.02752;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71516;QR=2115;RO=58;RPP=3799.11;RPPR=120.42;RUN=1;SAF=975;SAP=3.16967;SAR=987;SRF=34;SRP=6.75422;SRR=24;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:60.0588:17:0:0:17:586:-10,-5.11751,0 1/1:29.9558:7:0:0:7:243:-10,-2.10721,0 1/1:99:30:0:0:30:1096:-10,-9.0309,0 1/1:48.0176:13:0:0:13:456:-10,-3.91339,0 1/1:38.9867:10:0:0:10:361:-10,-3.0103,0 1/1:45.0073:12:0:0:12:451:-10,-3.61236,0 0/0:97.0724:45:45:1669:0:0:0,-10,-10 1/1:84.1411:25:0:0:25:937:-10,-7.52575,0 1/1:75.1103:22:0:0:22:796:-10,-6.62266,0 1/1:29.9558:7:0:0:7:261:-10,-2.10721,0 1/1:26.9455:6:0:0:6:222:-10,-1.80618,0 1/1:17.9146:3:0:0:3:111:-10,-0.90309,0 1/1:99:38:0:0:38:1406:-10,-10,0 1/1:99:54:0:0:54:2002:-10,-10,0 1/1:99:34:0:0:34:1256:-10,-10,0 0/1:99:26:12:430:14:526:-10,0,-10 1/1:93.1713:28:0:0:28:1024:-10,-8.42884,0 1/1:54.0382:15:0:0:15:567:-10,-4.51545,0 1/1:75.1103:22:0:0:22:801:-10,-6.62266,0 1/1:99:43:0:0:43:1525:-10,-10,0 1/1:84.1411:25:0:0:25:907:-10,-7.52575,0 1/1:99:46:0:0:46:1676:-10,-10,0 1/1:26.9455:6:0:0:6:227:-10,-1.80618,0 1/1:84.1411:25:0:0:25:875:-10,-7.52575,0 1/1:99:32:0:0:32:1134:-10,-9.63296,0 1/1:99:34:0:0:34:1261:-10,-10,0 1/1:75.1103:22:0:0:22:811:-10,-6.62266,0 1/1:41.997:11:0:0:11:412:-10,-3.31133,0 1/1:45.0073:12:0:0:12:451:-10,-3.61236,0 1/1:99:52:0:0:52:1924:-10,-10,0 1/1:17.9146:3:0:0:3:114:-10,-0.90309,0 1/1:29.9558:7:0:0:7:258:-10,-2.10721,0 1/1:63.0691:18:0:0:18:667:-10,-5.41854,0 1/1:38.9867:10:0:0:10:371:-10,-3.0103,0 1/1:51.0279:14:0:0:14:516:-10,-4.21442,0 1/1:51.0279:14:0:0:14:517:-10,-4.21442,0 1/1:38.9867:10:0:0:10:355:-10,-3.0103,0 1/1:99:37:0:0:37:1314:-10,-10,0 1/1:57.0485:16:0:0:16:582:-10,-4.81648,0 1/1:78.1206:23:0:0:23:835:-10,-6.92369,0 1/1:99:37:0:0:37:1366:-10,-10,0 1/1:81.1309:24:0:0:24:881:-10,-7.22472,0 1/1:54.0382:15:0:0:15:545:-10,-4.51545,0 1/1:99:33:0:0:33:1230:-10,-9.93399,0 1/1:75.1103:22:0:0:22:821:-10,-6.62266,0 1/1:72.1:21:0:0:21:777:-10,-6.32163,0 1/1:99:41:0:0:41:1542:-10,-10,0 1/1:99:32:0:0:32:1145:-10,-9.63296,0 1/1:57.0485:16:0:0:16:578:-10,-4.81648,0 1/1:99:44:0:0:44:1640:-10,-10,0 1/1:41.997:11:0:0:11:416:-10,-3.31133,0 1/1:99:48:0:0:48:1735:-10,-10,0 1/1:45.0073:12:0:0:12:426:-10,-3.61236,0 1/1:17.9146:3:0:0:3:101:-9.42667,-0.90309,0 1/1:99:48:0:0:48:1744:-10,-10,0 1/1:51.0279:14:0:0:14:532:-10,-4.21442,0 1/1:63.0691:18:0:0:18:653:-10,-5.41854,0 1/1:38.9867:10:0:0:10:348:-10,-3.0103,0 1/1:72.1:21:0:0:21:729:-10,-6.32163,0 1/1:35.9764:9:0:0:9:309:-10,-2.70927,0 1/1:99:37:0:0:37:1343:-10,-10,0 1/1:69.0897:20:0:0:20:688:-10,-6.0206,0 1/1:99:47:0:0:47:1720:-10,-10,0 1/1:66.0794:19:0:0:19:657:-10,-5.71957,0 1/1:45.0073:12:0:0:12:445:-10,-3.61236,0 1/1:99:39:0:0:39:1395:-10,-10,0 1/1:81.1309:24:0:0:24:902:-10,-7.22472,0 1/1:45.0073:12:0:0:12:435:-10,-3.61236,0 1/1:99:34:0:0:34:1206:-10,-10,0 1/1:51.0279:14:0:0:14:497:-10,-4.21442,0 1/1:72.1:21:0:0:21:723:-10,-6.32163,0 1/1:99:36:0:0:36:1308:-10,-10,0 1/1:72.1:21:0:0:21:775:-10,-6.32163,0 1/1:38.9867:10:0:0:10:373:-10,-3.0103,0 1/1:87.1513:26:0:0:26:963:-10,-7.82678,0 0/1:6.06527:8:1:16:7:266:-10,0,-0.09485 1/1:63.0691:18:0:0:18:623:-10,-5.41854,0 1/1:41.997:11:0:0:11:403:-10,-3.31133,0 1/1:38.9867:10:0:0:10:371:-10,-3.0103,0 1/1:38.9867:10:0:0:10:380:-10,-3.0103,0 1/1:99:41:0:0:41:1499:-10,-10,0 1/1:99:33:0:0:33:1240:-10,-9.93399,0 1/1:87.1513:26:0:0:26:976:-10,-7.82678,0 1/1:66.0794:19:0:0:19:609:-10,-5.71957,0 1/1:78.1206:23:0:0:23:844:-10,-6.92369,0 1/1:26.9455:6:0:0:6:225:-10,-1.80618,0 1/1:66.0794:19:0:0:19:707:-10,-5.71957,0 1/1:54.0382:15:0:0:15:556:-10,-4.51545,0 1/1:26.9455:6:0:0:6:206:-10,-1.80618,0 1/1:72.1:21:0:0:21:776:-10,-6.32163,0 1/1:48.0176:13:0:0:13:492:-10,-3.91339,0 1/1:57.0485:16:0:0:16:561:-10,-4.81648,0 scaffold_56 1207666 . G C 301.162 . AB=0.571429;ABP=3.94093;AC=1;AF=0.00543478;AN=184;AO=12;CIGAR=1X;DP=1996;DPB=1996;DPRA=0.967595;EPP=3.73412;EPPR=4.27681;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9132;NS=92;NUMALT=1;ODDS=10.5301;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=454;QR=71699;RO=1982;RPP=29.068;RPPR=4272.2;RUN=1;SAF=7;SAP=3.73412;SAR=5;SRF=974;SRP=4.27681;SRR=1008;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:84.8658:16:16:599:0:0:0,-4.81648,-10 0/0:57.7733:7:7:253:0:0:0,-2.10721,-10 0/0:99:30:30:1053:0:0:0,-9.0309,-10 0/0:75.8351:13:13:430:0:0:0,-3.91339,-10 0/0:66.8042:10:10:342:0:0:0,-3.0103,-10 0/0:72.8248:12:12:429:0:0:0,-3.61236,-10 0/0:99:45:45:1615:0:0:0,-10,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:99:21:21:769:0:0:0,-6.32163,-10 0/0:57.7733:7:7:244:0:0:0,-2.10721,-10 0/0:54.763:6:6:218:0:0:0,-1.80618,-10 0/0:45.7321:3:3:114:0:0:0,-0.90309,-10 0/0:99:36:36:1290:0:0:0,-10,-10 0/0:99:54:54:1970:0:0:0,-10,-10 0/0:99:34:34:1228:0:0:0,-10,-10 0/0:99:26:26:919:0:0:0,-7.82678,-10 0/0:99:28:28:1041:0:0:0,-8.42884,-10 0/0:81.8556:15:15:564:0:0:0,-4.51545,-10 0/0:99:22:22:767:0:0:0,-6.62266,-10 0/0:99:43:43:1520:0:0:0,-10,-10 0/0:99:25:25:847:0:0:0,-7.52575,-10 0/0:99:47:47:1742:0:0:0,-10,-10 0/0:48.7424:4:4:150:0:0:0,-1.20412,-10 0/0:99:26:26:895:0:0:0,-7.82678,-10 0/0:99:32:32:1162:0:0:0,-9.63296,-10 0/0:99:34:34:1239:0:0:0,-10,-10 0/0:99:22:22:800:0:0:0,-6.62266,-10 0/0:69.8145:11:11:379:0:0:0,-3.31133,-10 0/0:72.8248:12:12:454:0:0:0,-3.61236,-10 0/0:99:52:52:1901:0:0:0,-10,-10 0/0:45.7321:3:3:114:0:0:0,-0.90309,-10 0/0:57.7733:7:7:260:0:0:0,-2.10721,-10 0/0:90.8871:18:18:671:0:0:0,-5.41854,-10 0/0:66.8042:10:10:380:0:0:0,-3.0103,-10 0/0:81.8556:15:15:562:0:0:0,-4.51545,-10 0/0:78.8454:14:14:532:0:0:0,-4.21442,-10 0/0:63.7939:9:9:310:0:0:0,-2.70927,-10 0/0:99:35:34:1194:0:0:0,-10,-10 0/0:84.8658:16:16:588:0:0:0,-4.81648,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:99:35:35:1286:0:0:0,-10,-10 0/0:99:24:24:896:0:0:0,-7.22472,-10 0/0:81.8556:15:15:526:0:0:0,-4.51545,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:99:22:22:830:0:0:0,-6.62266,-10 0/0:93.8978:19:19:670:0:0:0,-5.71957,-10 0/0:99:40:40:1453:0:0:0,-10,-10 0/0:99:32:32:1114:0:0:0,-9.63296,-10 0/0:84.8658:16:16:566:0:0:0,-4.81648,-10 0/0:99:44:44:1626:0:0:0,-10,-10 0/0:69.8145:11:11:416:0:0:0,-3.31133,-10 0/0:99:48:48:1767:0:0:0,-10,-10 0/0:72.8248:12:12:427:0:0:0,-3.61236,-10 0/0:45.7321:3:3:102:0:0:0,-0.90309,-9.52 0/0:99:48:48:1732:0:0:0,-10,-10 0/0:78.8454:14:14:516:0:0:0,-4.21442,-10 0/0:90.8871:18:18:661:0:0:0,-5.41854,-10 0/0:60.7836:8:8:269:0:0:0,-2.40824,-10 0/0:99:21:21:736:0:0:0,-6.32163,-10 0/0:63.7939:9:9:296:0:0:0,-2.70927,-10 0/0:99:37:37:1359:0:0:0,-10,-10 0/0:96.9042:20:20:688:0:0:0,-6.0206,-10 0/0:99:46:46:1706:0:0:0,-10,-10 0/0:96.9042:20:20:686:0:0:0,-6.0206,-10 0/0:72.8248:12:12:426:0:0:0,-3.61236,-10 0/0:99:37:37:1322:0:0:0,-10,-10 0/0:99:22:22:827:0:0:0,-6.62266,-10 0/0:72.8248:12:12:448:0:0:0,-3.61236,-10 0/0:99:34:34:1243:0:0:0,-10,-10 0/0:78.8454:14:14:498:0:0:0,-4.21442,-10 0/0:99:21:21:765:0:0:0,-6.32163,-10 0/0:99:36:36:1298:0:0:0,-10,-10 0/1:99:21:9:331:12:454:-10,0,-10 0/0:66.8042:10:10:355:0:0:0,-3.0103,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:60.7836:8:8:265:0:0:0,-2.40824,-10 0/0:90.8871:18:18:661:0:0:0,-5.41854,-10 0/0:66.8042:10:10:367:0:0:0,-3.0103,-10 0/0:66.8042:10:10:368:0:0:0,-3.0103,-10 0/0:66.8042:10:10:374:0:0:0,-3.0103,-10 0/0:99:40:40:1478:0:0:0,-10,-10 0/0:99:33:33:1218:0:0:0,-9.93399,-10 0/0:99:26:26:954:0:0:0,-7.82678,-10 0/0:93.8978:19:19:618:0:0:0,-5.71957,-10 0/0:99:23:22:820:0:0:0,-6.62266,-10 0/0:48.7424:4:4:142:0:0:0,-1.20412,-10 0/0:93.8978:19:19:700:0:0:0,-5.71957,-10 0/0:81.8556:15:15:496:0:0:0,-4.51545,-10 0/0:54.763:6:6:192:0:0:0,-1.80618,-10 0/0:99:21:21:786:0:0:0,-6.32163,-10 0/0:75.8351:13:13:461:0:0:0,-3.91339,-10 0/0:84.8658:16:16:566:0:0:0,-4.81648,-10 scaffold_56 1251385 . G A 33586.5 . AB=0.489157;ABP=3.43413;AC=142;AF=0.78022;AN=182;AO=1140;CIGAR=1X;DP=1476;DPB=1476;DPRA=1.349;EPP=3.38364;EPPR=3.42639;GTI=3;LEN=1;MEANALT=1.0125;MQM=59.9491;MQMR=59.9491;NS=91;NUMALT=1;ODDS=0.400455;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=41866;QR=12196;RO=334;RPP=2461.15;RPPR=728.282;RUN=1;SAF=561;SAP=3.62746;SAR=579;SRF=163;SRP=3.42639;SRR=171;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:52.8478:14:0:0:14:531:-10,-4.21442,0 1/1:37.7963:9:0:0:9:326:-10,-2.70927,0 1/1:55.8581:15:0:0:15:563:-10,-4.51545,0 1/1:40.8066:10:0:0:10:358:-10,-3.0103,0 0/1:99:7:4:152:3:114:-10,0,-10 1/1:43.8169:11:0:0:11:412:-10,-3.31133,0 1/1:94.9897:28:0:0:28:1039:-10,-8.42884,0 1/1:79.9404:23:0:0:23:845:-10,-6.92369,0 1/1:52.8478:14:0:0:14:532:-10,-4.21442,0 .:.:.:.:.:.:.:. 1/1:52.8478:14:0:0:14:497:-10,-4.21442,0 1/1:25.7551:6:0:0:5:190:-10,-1.50515,0 1/1:94.9897:28:0:0:28:1032:-10,-8.42884,0 1/1:99:31:0:0:31:1120:-10,-9.33193,0 1/1:58.8684:16:0:0:16:604:-10,-4.81648,0 1/1:61.8787:17:0:0:17:578:-10,-5.11751,0 1/1:64.889:18:0:0:18:667:-10,-5.41854,0 1/1:49.8375:13:0:0:13:494:-10,-3.91339,0 0/1:99:21:14:485:7:264:-10,0,-10 1/1:99:32:0:0:32:1169:-10,-9.63296,0 1/1:49.8375:13:0:0:13:470:-10,-3.91339,0 0/1:99:28:12:454:16:595:-10,0,-10 0/0:21.0213:9:9:340:0:0:0,-2.70927,-10 1/1:43.8169:11:0:0:11:394:-10,-3.31133,0 1/1:67.8993:19:0:0:19:702:-10,-5.71957,0 0/1:99:34:18:667:16:583:-10,0,-10 1/1:49.8375:13:0:0:13:466:-10,-3.91339,0 1/1:43.8169:11:0:0:11:393:-10,-3.31133,0 1/1:46.8272:12:0:0:12:434:-10,-3.61236,0 1/1:79.9404:23:0:0:23:836:-10,-6.92369,0 1/1:28.7654:6:0:0:6:224:-10,-1.80618,0 1/1:19.7345:3:0:0:3:114:-10,-0.90309,0 0/0:33.0625:14:13:482:0:0:0,-3.91339,-10 1/1:34.786:8:0:0:8:301:-10,-2.40824,0 1/1:52.8478:14:0:0:14:462:-10,-4.21442,0 1/1:28.7654:6:0:0:6:226:-10,-1.80618,0 0/0:33.0625:13:13:468:0:0:0,-3.91339,-10 1/1:61.8787:17:0:0:17:627:-10,-5.11751,0 0/1:7.99658:13:1:38:12:426:-10,0,-1.00055 0/1:90.4028:8:3:113:5:189:-10,0,-9.88661 0/1:99:21:11:397:10:357:-10,0,-10 1/1:25.5388:21:1:38:20:709:-10,-1.19941,0 0/0:30.0522:12:12:432:0:0:0,-3.61236,-10 0/1:99:35:15:542:20:714:-10,0,-10 1/1:52.8478:14:0:0:14:523:-10,-4.21442,0 0/1:99:13:8:304:5:190:-10,0,-10 0/1:99:37:12:441:25:916:-10,0,-10 1/1:14.8315:17:1:38:16:599:-10,-0.087061,0 1/1:55.8581:15:0:0:15:564:-10,-4.51545,0 0/1:99:35:18:669:17:620:-10,0,-10 1/1:46.8272:12:0:0:12:447:-10,-3.61236,0 1/1:88.9708:26:0:0:26:977:-10,-7.82678,0 1/1:37.7963:9:0:0:9:340:-10,-2.70927,0 0/1:0.991039:4:4:142:0:0:0,-1.20412,-10 1/1:99:35:0:0:35:1300:-10,-10,0 1/1:34.786:8:0:0:8:277:-10,-2.40824,0 1/1:49.8375:13:0:0:13:469:-10,-3.91339,0 0/0:27.0419:11:11:399:0:0:0,-3.31133,-10 1/1:70.9096:20:0:0:20:732:-10,-6.0206,0 0/1:0.991039:4:4:147:0:0:0,-1.20412,-10 0/1:99:23:13:451:10:358:-10,0,-10 0/1:0.270588:18:17:621:1:38:0,-0.363267,-10 1/1:85.9608:25:0:0:25:897:-10,-7.52575,0 0/1:83.5664:12:3:113:9:342:-10,0,-9.27673 0/0:42.0934:16:16:578:0:0:0,-4.81648,-10 0/1:99:27:17:622:10:377:-10,0,-10 1/1:67.8993:19:0:0:19:690:-10,-5.71957,0 1/1:40.8066:10:0:0:10:367:-10,-3.0103,0 0/1:99:33:20:720:13:489:-10,0,-10 0/0:36.0728:14:14:508:0:0:0,-4.21442,-10 1/1:55.8581:15:0:0:15:538:-10,-4.51545,0 1/1:88.9708:26:0:0:26:982:-10,-7.82678,0 1/1:52.8478:14:0:0:14:513:-10,-4.21442,0 1/1:49.8375:13:0:0:13:467:-10,-3.91339,0 1/1:85.9608:25:0:0:25:948:-10,-7.52575,0 1/1:55.8581:15:0:0:15:563:-10,-4.51545,0 1/1:49.8375:13:0:0:13:480:-10,-3.91339,0 1/1:37.7963:9:0:0:9:314:-10,-2.70927,0 1/1:37.7963:9:0:0:9:339:-10,-2.70927,0 0/0:27.0419:11:11:407:0:0:0,-3.31133,-10 1/1:76.9302:22:0:0:22:793:-10,-6.62266,0 0/1:99:18:9:341:9:331:-10,0,-10 1/1:58.8684:16:0:0:16:600:-10,-4.81648,0 1/1:67.8993:19:0:0:19:711:-10,-5.71957,0 0/1:99:12:8:304:4:152:-10,0,-10 1/1:34.786:8:0:0:8:290:-10,-2.40824,0 0/0:33.0625:13:13:444:0:0:0,-3.91339,-10 1/1:46.8272:12:0:0:12:429:-10,-3.61236,0 0/1:66.486:6:4:149:2:63:-5.35491,0,-10 1/1:49.8375:13:0:0:13:490:-10,-3.91339,0 0/1:99:14:5:190:9:340:-10,0,-10 1/1:46.8272:12:0:0:12:454:-10,-3.61236,0 scaffold_56 1251389 . A G 2773.13 . AB=0.607143;ABP=16.9698;AC=12;AF=0.0659341;AN=182;AO=111;CIGAR=1X;DP=1471;DPB=1471;DPRA=1.03034;EPP=3.49937;EPPR=4.26209;GTI=2;LEN=1;MEANALT=1;MQM=59.8468;MQMR=59.9574;NS=91;NUMALT=1;ODDS=1.00876;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3950;QR=49935;RO=1360;RPP=244.044;RPPR=2956.21;RUN=1;SAF=53;SAP=3.49937;SAR=58;SRF=666;SRP=4.26209;SRR=694;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.625:14:14:530:0:0:0,-4.21442,-10 0/0:38.5735:9:9:338:0:0:0,-2.70927,-10 0/0:56.6353:15:15:562:0:0:0,-4.51545,-10 0/0:41.5838:10:10:360:0:0:0,-3.0103,-10 0/0:32.5529:7:7:266:0:0:0,-2.10721,-10 0/0:44.5941:11:11:393:0:0:0,-3.31133,-10 0/0:95.7638:28:28:1051:0:0:0,-8.42884,-10 0/0:80.7177:23:23:869:0:0:0,-6.92369,-10 0/0:53.625:14:14:525:0:0:0,-4.21442,-10 .:.:.:.:.:.:.:. 0/0:53.625:14:14:519:0:0:0,-4.21442,-10 0/0:29.5426:6:6:205:0:0:0,-1.80618,-10 0/0:95.7638:28:28:1062:0:0:0,-8.42884,-10 0/0:99:31:31:1121:0:0:0,-9.33193,-10 0/0:59.6456:16:16:603:0:0:0,-4.81648,-10 0/0:62.6559:17:17:634:0:0:0,-5.11751,-10 0/0:65.6662:18:18:679:0:0:0,-5.41854,-10 0/0:50.6147:13:13:494:0:0:0,-3.91339,-10 0/1:99:21:7:261:14:498:-10,0,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:50.6147:13:13:462:0:0:0,-3.91339,-10 0/0:95.7638:28:28:1021:0:0:0,-8.42884,-10 0/1:1.17338:9:0:0:9:334:-10,-2.70927,0 0/0:44.5941:11:11:399:0:0:0,-3.31133,-10 0/0:68.6765:19:19:712:0:0:0,-5.71957,-10 0/0:99:34:34:1214:0:0:0,-10,-10 0/0:50.6147:13:13:490:0:0:0,-3.91339,-10 0/0:44.5941:11:11:412:0:0:0,-3.31133,-10 0/0:47.6044:12:12:447:0:0:0,-3.61236,-10 0/0:80.7177:23:23:836:0:0:0,-6.92369,-10 0/0:29.5426:6:6:213:0:0:0,-1.80618,-10 0/0:20.5117:3:3:114:0:0:0,-0.90309,-10 0/0:53.625:14:14:503:0:0:0,-4.21442,-10 0/0:35.5632:8:8:291:0:0:0,-2.40824,-10 0/0:53.625:14:14:492:0:0:0,-4.21442,-10 0/0:29.5426:6:6:227:0:0:0,-1.80618,-10 0/0:47.6044:12:12:440:0:0:0,-3.61236,-10 0/0:62.6559:17:17:633:0:0:0,-5.11751,-10 0/1:11.0951:12:11:408:1:38:-1.26682,0,-10 0/0:35.5632:8:8:303:0:0:0,-2.40824,-10 0/0:74.6971:21:21:758:0:0:0,-6.32163,-10 0/0:74.6971:21:21:762:0:0:0,-6.32163,-10 0/0:47.6044:12:12:416:0:0:0,-3.61236,-10 0/0:99:35:35:1267:0:0:0,-10,-10 0/0:53.625:14:14:501:0:0:0,-4.21442,-10 0/0:50.6147:13:13:486:0:0:0,-3.91339,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:62.6559:17:17:623:0:0:0,-5.11751,-10 0/0:56.6353:15:15:537:0:0:0,-4.51545,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:47.6044:12:12:450:0:0:0,-3.61236,-10 0/0:89.7482:26:26:947:0:0:0,-7.82678,-10 0/0:38.5735:9:9:335:0:0:0,-2.70927,-10 0/0:23.522:4:4:144:0:0:0,-1.20412,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:35.5632:8:8:288:0:0:0,-2.40824,-10 0/0:50.6147:13:13:493:0:0:0,-3.91339,-10 0/0:44.5941:11:11:390:0:0:0,-3.31133,-10 0/0:71.6868:20:20:716:0:0:0,-6.0206,-10 0/0:23.522:4:4:147:0:0:0,-1.20412,-10 0/1:99:23:10:376:13:419:-10,0,-10 0/1:0.00962521:18:1:38:17:642:-10,-0.363267,0 0/0:86.7381:25:25:912:0:0:0,-7.52575,-10 0/1:82.9593:12:9:342:3:114:-9.37006,0,-10 0/0:59.6456:16:16:601:0:0:0,-4.81648,-10 0/0:92.7581:27:27:964:0:0:0,-8.12781,-10 0/0:65.6662:18:18:675:0:0:0,-5.41854,-10 0/0:41.5838:10:10:378:0:0:0,-3.0103,-10 0/1:99:33:13:478:20:710:-10,0,-10 1/1:27.399:14:0:0:14:507:-10,-4.21442,0 0/0:56.6353:15:15:555:0:0:0,-4.51545,-10 0/0:89.7482:26:26:944:0:0:0,-7.82678,-10 0/0:53.625:14:14:485:0:0:0,-4.21442,-10 0/0:50.6147:13:13:472:0:0:0,-3.91339,-10 0/0:86.7381:25:25:894:0:0:0,-7.52575,-10 0/0:56.6353:15:15:567:0:0:0,-4.51545,-10 0/0:50.6147:13:13:489:0:0:0,-3.91339,-10 0/0:38.5735:9:9:320:0:0:0,-2.70927,-10 0/0:38.5735:9:9:325:0:0:0,-2.70927,-10 0/0:44.5941:11:11:371:0:0:0,-3.31133,-10 0/0:77.7074:22:22:795:0:0:0,-6.62266,-10 0/0:65.6662:18:18:673:0:0:0,-5.41854,-10 0/0:59.6456:16:16:573:0:0:0,-4.81648,-10 0/0:68.6765:19:19:698:0:0:0,-5.71957,-10 0/1:99:12:4:148:8:300:-10,0,-10 0/0:35.5632:8:8:303:0:0:0,-2.40824,-10 1/1:21.3784:12:0:0:12:388:-10,-3.61236,0 0/0:47.6044:12:12:441:0:0:0,-3.61236,-10 0/0:29.5426:6:6:223:0:0:0,-1.80618,-10 0/0:50.6147:13:13:494:0:0:0,-3.91339,-10 0/0:53.625:14:14:527:0:0:0,-4.21442,-10 0/0:47.6044:12:12:445:0:0:0,-3.61236,-10 scaffold_56 1323117 . A T 1378.23 . AB=0.513274;ABP=3.18325;AC=6;AF=0.0326087;AN=184;AO=59;CIGAR=1X;DP=1264;DPB=1264;DPRA=1.34446;EPP=7.46366;EPPR=9.51388;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9443;NS=92;NUMALT=1;ODDS=1.97723;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2026;QR=42482;RO=1202;RPP=131.127;RPPR=2613.12;RUN=1;SAF=24;SAP=7.46366;SAR=35;SRF=631;SRP=9.51388;SRR=571;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:31.326:7:7:258:0:0:0,-2.10721,-10 0/0:19.2848:3:3:110:0:0:0,-0.90309,-10 0/0:70.4599:20:20:733:0:0:0,-6.0206,-10 0/0:46.3775:12:12:419:0:0:0,-3.61236,-10 0/0:28.3157:6:6:191:0:0:0,-1.80618,-10 0/0:10.2538:1:0:0:0:0:0,0,0 0/1:99:28:11:403:17:601:-10,0,-10 0/0:24.365:13:12:404:1:16:0,-1.19945,-10 0/0:31.326:7:7:254:0:0:0,-2.10721,-10 0/0:13.2642:1:1:38:0:0:0,-0.30103,-3.8 0/1:0.0212465:8:0:0:8:280:-10,-2.40824,0 0/0:16.2745:2:2:76:0:0:0,-0.60206,-7.22 0/1:99:25:12:430:13:454:-10,0,-10 0/0:88.5216:26:26:948:0:0:0,-7.82678,-10 0/1:44.298:12:8:291:4:84:-6.85225,0,-10 0/1:99:15:9:304:6:228:-10,0,-10 0/1:99:25:15:566:10:363:-10,0,-10 0/0:22.2951:4:4:142:0:0:0,-1.20412,-10 0/0:73.4702:21:21:711:0:0:0,-6.32163,-10 0/0:88.5216:26:26:906:0:0:0,-7.82678,-10 0/0:52.3981:14:14:484:0:0:0,-4.21442,-10 0/0:73.4702:21:21:648:0:0:0,-6.32163,-10 0/0:19.2848:3:3:114:0:0:0,-0.90309,-10 0/0:64.4393:18:18:623:0:0:0,-5.41854,-10 0/0:61.429:17:17:617:0:0:0,-5.11751,-10 0/0:76.4805:22:22:792:0:0:0,-6.62266,-10 0/0:55.4084:15:15:532:0:0:0,-4.51545,-10 0/0:40.3569:10:10:375:0:0:0,-3.0103,-10 0/0:58.4187:16:16:586:0:0:0,-4.81648,-10 0/0:67.4496:20:19:711:0:0:0,-5.71957,-10 0/0:16.2745:2:2:76:0:0:0,-0.60206,-7.22 0/0:52.3981:14:14:483:0:0:0,-4.21442,-10 0/0:64.4393:18:18:626:0:0:0,-5.41854,-10 0/0:52.3981:14:14:501:0:0:0,-4.21442,-10 0/0:28.3157:6:6:190:0:0:0,-1.80618,-10 0/0:25.3054:5:5:170:0:0:0,-1.50515,-10 0/0:52.3981:14:14:427:0:0:0,-4.21442,-10 0/0:76.4805:22:22:744:0:0:0,-6.62266,-10 0/0:31.326:7:7:244:0:0:0,-2.10721,-10 0/0:40.3569:10:10:369:0:0:0,-3.0103,-10 0/0:61.429:17:17:619:0:0:0,-5.11751,-10 0/0:61.429:17:17:576:0:0:0,-5.11751,-10 0/0:43.3672:11:11:400:0:0:0,-3.31133,-10 0/0:76.4805:22:22:804:0:0:0,-6.62266,-10 0/0:49.3878:13:13:489:0:0:0,-3.91339,-10 0/0:37.3466:9:9:320:0:0:0,-2.70927,-10 0/0:88.5216:26:26:977:0:0:0,-7.82678,-10 0/0:58.4187:16:16:569:0:0:0,-4.81648,-10 0/0:31.326:7:7:250:0:0:0,-2.10721,-10 0/0:97.5494:29:29:996:0:0:0,-8.72987,-10 0/0:43.3672:11:11:417:0:0:0,-3.31133,-10 0/0:99:33:33:1115:0:0:0,-9.93399,-10 0/0:43.3672:11:11:346:0:0:0,-3.31133,-10 0/0:19.2848:3:3:109:0:0:0,-0.90309,-10 0/0:99:32:32:1076:0:0:0,-9.63296,-10 0/0:40.3569:10:10:319:0:0:0,-3.0103,-10 0/0:67.4496:20:19:687:0:0:0,-5.71957,-10 0/0:37.3466:9:9:311:0:0:0,-2.70927,-10 0/0:37.3466:9:9:292:0:0:0,-2.70927,-10 0/0:37.3466:9:9:329:0:0:0,-2.70927,-10 0/0:64.4393:18:18:627:0:0:0,-5.41854,-10 0/0:46.3775:12:12:440:0:0:0,-3.61236,-10 0/0:76.4805:22:22:765:0:0:0,-6.62266,-10 0/0:46.3775:12:12:426:0:0:0,-3.61236,-10 0/0:52.3981:14:14:452:0:0:0,-4.21442,-10 0/0:58.4187:16:16:585:0:0:0,-4.81648,-10 0/0:49.3878:13:13:430:0:0:0,-3.91339,-10 0/0:31.326:7:7:262:0:0:0,-2.10721,-10 0/0:88.5216:26:26:951:0:0:0,-7.82678,-10 0/0:43.3672:11:11:413:0:0:0,-3.31133,-10 0/0:37.3466:9:9:330:0:0:0,-2.70927,-10 0/0:82.5011:24:24:857:0:0:0,-7.22472,-10 0/0:49.3878:13:13:470:0:0:0,-3.91339,-10 0/0:76.4805:22:22:811:0:0:0,-6.62266,-10 0/0:94.5421:28:28:983:0:0:0,-8.42884,-10 0/0:46.3775:12:12:434:0:0:0,-3.61236,-10 0/0:43.3672:11:11:406:0:0:0,-3.31133,-10 0/0:22.2951:4:4:151:0:0:0,-1.20412,-10 0/0:19.2848:3:3:112:0:0:0,-0.90309,-10 0/0:40.3569:10:10:361:0:0:0,-3.0103,-10 0/0:85.5114:25:25:850:0:0:0,-7.52575,-10 0/0:37.3466:9:9:340:0:0:0,-2.70927,-10 0/0:61.429:17:17:623:0:0:0,-5.11751,-10 0/0:40.3569:10:10:367:0:0:0,-3.0103,-10 0/0:49.3878:13:13:460:0:0:0,-3.91339,-10 0/0:13.2642:1:1:37:0:0:0,-0.30103,-3.7 0/0:40.3569:10:10:376:0:0:0,-3.0103,-10 0/0:46.3775:12:12:434:0:0:0,-3.61236,-10 0/0:25.3054:5:5:187:0:0:0,-1.50515,-10 0/0:43.3672:11:11:357:0:0:0,-3.31133,-10 0/0:49.3878:13:13:459:0:0:0,-3.91339,-10 0/0:31.326:7:7:229:0:0:0,-2.10721,-10 scaffold_56 1376665 . G A 366.751 . AB=0.652174;ABP=7.63648;AC=1;AF=0.00543478;AN=184;AO=15;CIGAR=1X;DP=1642;DPB=1642;DPRA=1.29277;EPP=4.31318;EPPR=7.04761;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9656;NS=92;NUMALT=1;ODDS=5.11914;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=552;QR=59173;RO=1627;RPP=35.5824;RPPR=3230.22;RUN=1;SAF=6;SAP=4.31318;SAR=9;SRF=750;SRP=24.5368;SRR=877;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.4671:17:17:595:0:0:0,-5.11751,-10 0/0:43.3744:8:8:304:0:0:0,-2.40824,-10 0/0:61.4362:14:14:512:0:0:0,-4.21442,-10 0/0:46.3847:9:9:336:0:0:0,-2.70927,-10 0/0:49.395:10:10:376:0:0:0,-3.0103,-10 0/0:28.3229:3:3:107:0:0:0,-0.90309,-9.98667 0/0:99:37:37:1369:0:0:0,-10,-10 0/0:76.4877:19:19:709:0:0:0,-5.71957,-10 0/0:67.4568:16:16:574:0:0:0,-4.81648,-10 0/0:22.3023:1:1:36:0:0:0,-0.30103,-3.6 0/0:25.3126:2:2:76:0:0:0,-0.60206,-7.22 0/0:52.4053:11:11:376:0:0:0,-3.31133,-10 0/0:91.5388:24:24:867:0:0:0,-7.22472,-10 0/0:99:33:33:1232:0:0:0,-9.93399,-10 0/0:67.4568:16:16:565:0:0:0,-4.81648,-10 0/0:82.5083:21:21:758:0:0:0,-6.32163,-10 0/0:64.4465:15:15:561:0:0:0,-4.51545,-10 0/0:34.3435:5:5:163:0:0:0,-1.50515,-10 0/0:91.5388:24:24:891:0:0:0,-7.22472,-10 0/0:99:35:35:1266:0:0:0,-10,-10 0/0:64.4465:15:15:535:0:0:0,-4.51545,-10 0/0:82.5083:21:21:791:0:0:0,-6.32163,-10 0/0:34.3435:5:5:182:0:0:0,-1.50515,-10 0/0:67.4568:16:16:564:0:0:0,-4.81648,-10 0/0:58.4259:13:13:461:0:0:0,-3.91339,-10 0/0:82.5083:21:21:743:0:0:0,-6.32163,-10 0/0:58.4259:13:13:489:0:0:0,-3.91339,-10 0/0:61.4362:14:14:498:0:0:0,-4.21442,-10 0/0:58.4259:13:13:448:0:0:0,-3.91339,-10 0/0:99:41:41:1453:0:0:0,-10,-10 0/0:40.3641:7:7:242:0:0:0,-2.10721,-10 0/0:40.3641:7:7:259:0:0:0,-2.10721,-10 0/0:55.4156:12:12:449:0:0:0,-3.61236,-10 0/0:67.4568:16:16:568:0:0:0,-4.81648,-10 0/0:55.4156:12:12:426:0:0:0,-3.61236,-10 0/0:31.3332:4:4:152:0:0:0,-1.20412,-10 0/0:43.3744:8:8:286:0:0:0,-2.40824,-10 0/0:94.5488:25:25:931:0:0:0,-7.52575,-10 0/0:70.4671:17:17:610:0:0:0,-5.11751,-10 0/0:52.4053:11:11:411:0:0:0,-3.31133,-10 0/0:99:27:27:937:0:0:0,-8.12781,-10 0/0:73.4774:18:18:670:0:0:0,-5.41854,-10 0/0:70.4671:17:17:637:0:0:0,-5.11751,-10 0/0:99:44:44:1596:0:0:0,-10,-10 0/0:91.5388:24:24:869:0:0:0,-7.22472,-10 0/0:43.3744:8:8:299:0:0:0,-2.40824,-10 0/0:99:49:49:1811:0:0:0,-10,-10 0/0:97.5583:26:26:938:0:0:0,-7.82678,-10 0/0:46.3847:9:9:312:0:0:0,-2.70927,-10 0/0:99:45:45:1558:0:0:0,-10,-10 0/0:37.3538:6:6:217:0:0:0,-1.80618,-10 0/0:99:43:43:1573:0:0:0,-10,-10 0/0:40.3641:7:7:262:0:0:0,-2.10721,-10 0/0:37.3538:6:6:225:0:0:0,-1.80618,-10 0/0:99:35:35:1255:0:0:0,-10,-10 0/0:64.4465:15:15:562:0:0:0,-4.51545,-10 0/0:70.4671:17:17:621:0:0:0,-5.11751,-10 0/0:28.3229:3:3:111:0:0:0,-0.90309,-10 0/0:70.4671:17:17:627:0:0:0,-5.11751,-10 0/0:49.395:10:10:351:0:0:0,-3.0103,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:73.4774:18:18:648:0:0:0,-5.41854,-10 0/0:99:47:47:1723:0:0:0,-10,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:55.4156:12:12:422:0:0:0,-3.61236,-10 0/0:97.5583:26:26:982:0:0:0,-7.82678,-10 0/0:43.3744:8:8:298:0:0:0,-2.40824,-10 0/0:52.4053:11:11:416:0:0:0,-3.31133,-10 0/0:99:31:31:1156:0:0:0,-9.33193,-10 0/0:55.4156:12:12:454:0:0:0,-3.61236,-10 0/0:79.498:20:20:732:0:0:0,-6.0206,-10 0/0:99:28:28:1033:0:0:0,-8.42884,-10 0/1:99:23:8:281:15:552:-10,0,-10 0/0:76.4877:19:19:709:0:0:0,-5.71957,-10 0/0:99:35:35:1211:0:0:0,-10,-10 0/0:43.3744:8:8:289:0:0:0,-2.40824,-10 0/0:64.4465:15:15:547:0:0:0,-4.51545,-10 0/0:58.4259:13:13:494:0:0:0,-3.91339,-10 0/0:37.3538:6:6:203:0:0:0,-1.80618,-10 0/0:55.4156:12:12:452:0:0:0,-3.61236,-10 0/0:99:35:35:1280:0:0:0,-10,-10 0/0:99:31:31:1174:0:0:0,-9.33193,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 0/0:76.4877:19:19:697:0:0:0,-5.71957,-10 0/0:97.5583:26:26:925:0:0:0,-7.82678,-10 0/0:31.3332:4:4:152:0:0:0,-1.20412,-10 0/0:43.3744:8:8:275:0:0:0,-2.40824,-10 0/0:55.4156:12:12:435:0:0:0,-3.61236,-10 0/0:31.3332:4:4:150:0:0:0,-1.20412,-10 0/0:64.4465:15:15:525:0:0:0,-4.51545,-10 0/0:67.4568:16:16:589:0:0:0,-4.81648,-10 0/0:40.3641:7:7:254:0:0:0,-2.10721,-10 scaffold_56 1376672 . C T 2270.02 . AB=0;ABP=0;AC=8;AF=0.0434783;AN=184;AO=91;CIGAR=1X;DP=1639;DPB=1639;DPRA=1.3806;EPP=3.60686;EPPR=7.10075;GTI=0;LEN=1;MEANALT=1;MQM=59.956;MQMR=59.9664;NS=92;NUMALT=1;ODDS=4.05951;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3304;QR=55872;RO=1548;RPP=200.614;RPPR=3059.03;RUN=1;SAF=43;SAP=3.60686;SAR=48;SRF=711;SRP=25.2805;SRR=837;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:97.5131:17:17:619:0:0:0,-5.11751,-10 0/0:70.4225:8:8:278:0:0:0,-2.40824,-10 0/0:88.484:14:14:523:0:0:0,-4.21442,-10 0/0:73.4328:9:9:339:0:0:0,-2.70927,-10 0/0:76.4431:10:10:378:0:0:0,-3.0103,-10 0/0:55.371:3:3:114:0:0:0,-0.90309,-10 0/0:99:37:37:1317:0:0:0,-10,-10 0/0:99:19:19:695:0:0:0,-5.71957,-10 0/0:94.5039:16:16:559:0:0:0,-4.81648,-10 0/0:49.3316:1:1:38:0:0:0,-0.30103,-3.8 0/0:52.3605:2:2:67:0:0:0,-0.60206,-6.365 0/0:79.4533:11:11:352:0:0:0,-3.31133,-10 0/0:99:24:24:827:0:0:0,-7.22472,-10 0/0:99:33:33:1244:0:0:0,-9.93399,-10 0/0:94.5039:16:16:601:0:0:0,-4.81648,-10 0/0:99:21:21:746:0:0:0,-6.32163,-10 0/0:91.4941:15:15:551:0:0:0,-4.51545,-10 0/0:61.3916:5:5:184:0:0:0,-1.50515,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:91.4941:15:15:545:0:0:0,-4.51545,-10 0/0:99:21:21:774:0:0:0,-6.32163,-10 0/0:61.3916:5:5:187:0:0:0,-1.50515,-10 0/0:94.5039:16:16:568:0:0:0,-4.81648,-10 0/0:85.4739:13:13:442:0:0:0,-3.91339,-10 0/0:99:21:21:729:0:0:0,-6.32163,-10 0/0:85.4739:13:13:476:0:0:0,-3.91339,-10 0/0:88.484:14:14:492:0:0:0,-4.21442,-10 0/0:85.4739:13:13:391:0:0:0,-3.91339,-10 0/0:99:41:41:1466:0:0:0,-10,-10 0/0:67.4122:7:7:250:0:0:0,-2.10721,-10 0/0:67.4122:7:7:263:0:0:0,-2.10721,-10 0/0:82.4636:12:12:442:0:0:0,-3.61236,-10 0/0:94.5039:16:16:592:0:0:0,-4.81648,-10 0/0:82.4636:12:12:455:0:0:0,-3.61236,-10 0/0:58.3813:4:4:152:0:0:0,-1.20412,-10 0/0:70.4225:8:8:256:0:0:0,-2.40824,-10 0/0:99:25:25:862:0:0:0,-7.52575,-10 0/0:97.5131:17:17:600:0:0:0,-5.11751,-10 0/0:79.4533:11:11:397:0:0:0,-3.31133,-10 0/0:80.3831:27:26:910:1:37:0,-2.99645,-10 0/0:99:18:18:649:0:0:0,-5.41854,-10 0/0:97.5131:17:17:630:0:0:0,-5.11751,-10 0/0:99:44:44:1592:0:0:0,-10,-10 0/0:99:24:24:864:0:0:0,-7.22472,-10 0/0:70.4225:8:8:302:0:0:0,-2.40824,-10 0/0:99:48:48:1733:0:0:0,-10,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:73.4328:9:9:305:0:0:0,-2.70927,-10 0/0:99:45:45:1546:0:0:0,-10,-10 0/0:64.4019:6:6:209:0:0:0,-1.80618,-10 0/0:99:43:43:1531:0:0:0,-10,-10 0/0:67.4122:7:7:257:0:0:0,-2.10721,-10 0/0:64.4019:6:6:228:0:0:0,-1.80618,-10 0/0:99:35:35:1312:0:0:0,-10,-10 0/0:88.484:14:14:526:0:0:0,-4.21442,-10 0/0:97.5131:17:17:605:0:0:0,-5.11751,-10 0/0:55.371:3:3:112:0:0:0,-0.90309,-10 0/0:97.5131:17:17:623:0:0:0,-5.11751,-10 0/0:76.4431:10:10:368:0:0:0,-3.0103,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:99:18:18:636:0:0:0,-5.41854,-10 0/0:99:47:47:1707:0:0:0,-10,-10 0/0:79.4276:27:26:946:1:37:0,-2.99645,-10 0/0:82.4636:12:12:407:0:0:0,-3.61236,-10 0/0:99:26:26:930:0:0:0,-7.82678,-10 0/0:70.4225:8:8:301:0:0:0,-2.40824,-10 0/0:79.4533:11:11:412:0:0:0,-3.31133,-10 0/0:99:31:31:1133:0:0:0,-9.33193,-10 0/0:82.4636:12:12:433:0:0:0,-3.61236,-10 1/1:17.7047:20:1:38:19:679:-10,-0.91957,0 1/1:89.4745:28:0:0:28:989:-10,-8.42884,0 1/1:74.4233:23:0:0:23:865:-10,-6.92369,0 1/1:62.3821:19:0:0:19:697:-10,-5.71957,0 0/0:99:35:35:1246:0:0:0,-10,-10 0/0:70.4225:8:8:294:0:0:0,-2.40824,-10 0/0:91.4941:15:15:545:0:0:0,-4.51545,-10 0/0:85.4739:13:13:492:0:0:0,-3.91339,-10 0/0:64.4019:6:6:206:0:0:0,-1.80618,-10 0/0:82.4636:12:12:432:0:0:0,-3.61236,-10 0/0:99:35:35:1251:0:0:0,-10,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/0:99:19:19:689:0:0:0,-5.71957,-10 0/0:99:26:26:941:0:0:0,-7.82678,-10 0/0:58.3813:4:4:152:0:0:0,-1.20412,-10 0/0:70.4225:8:8:287:0:0:0,-2.40824,-10 0/0:82.4636:12:12:443:0:0:0,-3.61236,-10 0/0:58.3813:4:4:150:0:0:0,-1.20412,-10 0/0:91.4941:15:15:520:0:0:0,-4.51545,-10 0/0:94.5039:16:16:595:0:0:0,-4.81648,-10 0/0:67.4122:7:7:252:0:0:0,-2.10721,-10 scaffold_56 1451533 . C T 1325.35 . AB=0.662162;ABP=19.9126;AC=2;AF=0.0107527;AN=186;AO=53;CIGAR=1X;DP=2571;DPB=2571;DPRA=1.7676;EPP=3.37904;EPPR=3.83938;GTI=1;LEN=1;MEANALT=1;MQM=59.7925;MQMR=59.9631;NS=93;NUMALT=1;ODDS=3.23214;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1880;QR=91358;RO=2517;RPP=118.098;RPPR=5468.61;RUN=1;SAF=25;SAP=3.37904;SAR=28;SRF=1243;SRP=3.83938;SRR=1274;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.5038:21:21:779:0:0:0,-6.32163,-10 0/0:65.5038:21:21:790:0:0:0,-6.32163,-10 0/0:99:34:34:1262:0:0:0,-10,-10 0/0:47.442:15:15:554:0:0:0,-4.51545,-10 0/0:77.5449:25:25:936:0:0:0,-7.52575,-10 0/0:41.4214:13:13:462:0:0:0,-3.91339,-10 0/0:99:49:49:1772:0:0:0,-10,-10 0/0:99:33:33:1208:0:0:0,-9.93399,-10 0/0:62.4935:20:20:685:0:0:0,-6.0206,-10 0/0:26.3699:8:8:299:0:0:0,-2.40824,-10 0/0:32.3905:10:10:376:0:0:0,-3.0103,-10 0/0:29.3802:9:9:341:0:0:0,-2.70927,-10 0/0:99:43:43:1574:0:0:0,-10,-10 0/0:99:44:44:1586:0:0:0,-10,-10 0/0:99:40:40:1417:0:0:0,-10,-10 0/0:99:43:42:1557:1:16:0,-9.71082,-10 0/0:99:39:39:1429:0:0:0,-10,-10 0/0:35.4008:11:11:414:0:0:0,-3.31133,-10 0/0:83.5656:27:27:1003:0:0:0,-8.12781,-10 0/0:99:43:43:1551:0:0:0,-10,-10 0/0:89.5855:29:29:1047:0:0:0,-8.72987,-10 0/0:99:47:47:1709:0:0:0,-10,-10 0/0:32.3905:10:10:371:0:0:0,-3.0103,-10 0/0:98.6116:32:32:1202:0:0:0,-9.63296,-10 0/0:58.8236:28:27:981:1:16:0,-5.38168,-10 0/0:99:46:46:1652:0:0:0,-10,-10 0/0:80.5553:26:26:945:0:0:0,-7.82678,-10 0/0:41.4214:13:13:482:0:0:0,-3.91339,-10 0/0:99:43:43:1525:0:0:0,-10,-10 0/0:98.8548:46:45:1593:1:28:0,-9.38462,-10 0/0:44.4317:14:14:492:0:0:0,-4.21442,-10 0/0:14.3287:4:4:152:0:0:0,-1.20412,-10 0/0:83.5656:27:27:995:0:0:0,-8.12781,-10 0/0:38.4111:12:12:454:0:0:0,-3.61236,-10 0/0:62.4935:20:20:750:0:0:0,-6.0206,-10 0/0:17.339:5:5:171:0:0:0,-1.50515,-10 0/0:50.4523:16:16:539:0:0:0,-4.81648,-10 0/0:98.6116:32:32:1134:0:0:0,-9.63296,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:71.5244:23:23:789:0:0:0,-6.92369,-10 0/0:99:41:41:1517:0:0:0,-10,-10 0/0:59.4832:19:19:699:0:0:0,-5.71957,-10 0/0:65.5038:21:21:771:0:0:0,-6.32163,-10 0/0:99:43:42:1511:0:0:0,-10,-10 0/0:99:34:34:1281:0:0:0,-10,-10 0/0:74.5347:24:24:892:0:0:0,-7.22472,-10 0/0:99:64:64:2256:0:0:0,-10,-10 0/0:99:37:37:1343:0:0:0,-10,-10 0/0:80.5553:26:26:934:0:0:0,-7.82678,-10 0/1:99:74:25:912:49:1804:-10,0,-10 0/0:41.4214:13:13:489:0:0:0,-3.91339,-10 0/0:99:48:48:1768:0:0:0,-10,-10 0/0:62.4935:20:20:729:0:0:0,-6.0206,-10 0/0:44.4317:14:14:528:0:0:0,-4.21442,-10 0/0:99:65:65:2343:0:0:0,-10,-10 0/0:65.5038:21:21:747:0:0:0,-6.32163,-10 0/0:99:34:34:1218:0:0:0,-10,-10 0/0:38.4111:12:12:447:0:0:0,-3.61236,-10 0/0:83.5656:27:27:1026:0:0:0,-8.12781,-10 0/0:44.4317:14:14:505:0:0:0,-4.21442,-10 0/0:99:46:45:1664:1:16:0,-10,-10 0/0:83.5656:27:27:975:0:0:0,-8.12781,-10 0/0:99:55:55:1956:0:0:0,-10,-10 0/0:71.5244:23:23:820:0:0:0,-6.92369,-10 0/0:38.4111:12:12:453:0:0:0,-3.61236,-10 0/0:99:40:40:1465:0:0:0,-10,-10 0/0:68.5141:22:22:824:0:0:0,-6.62266,-10 0/0:35.4008:11:11:409:0:0:0,-3.31133,-10 0/0:99:36:36:1226:0:0:0,-10,-10 0/0:32.3905:10:10:356:0:0:0,-3.0103,-10 0/0:89.5855:29:29:1049:0:0:0,-8.72987,-10 0/0:99:45:45:1644:0:0:0,-10,-10 0/0:98.6116:32:32:1149:0:0:0,-9.63296,-10 0/0:56.4729:18:18:666:0:0:0,-5.41854,-10 0/0:99:53:53:1854:0:0:0,-10,-10 0/0:68.5141:22:22:813:0:0:0,-6.62266,-10 0/0:74.5347:24:24:889:0:0:0,-7.22472,-10 0/0:38.4111:12:12:443:0:0:0,-3.61236,-10 0/0:29.3802:9:9:337:0:0:0,-2.70927,-10 0/0:62.4935:20:20:683:0:0:0,-6.0206,-10 0/0:99:39:39:1432:0:0:0,-10,-10 0/0:99:47:47:1707:0:0:0,-10,-10 0/0:95.6041:31:31:1133:0:0:0,-9.33193,-10 0/0:86.5755:28:28:1005:0:0:0,-8.42884,-10 0/0:83.5656:27:27:987:0:0:0,-8.12781,-10 0/0:29.3802:9:9:337:0:0:0,-2.70927,-10 0/0:92.5969:30:30:1048:0:0:0,-9.0309,-10 0/0:62.4935:20:20:741:0:0:0,-6.0206,-10 0/0:32.3905:10:10:345:0:0:0,-3.0103,-10 0/0:65.5038:21:21:733:0:0:0,-6.32163,-10 0/0:89.5855:29:29:1055:0:0:0,-8.72987,-10 0/0:74.5347:24:24:863:0:0:0,-7.22472,-10 scaffold_56 1484587 . T C 1725.72 . AB=0.677419;ABP=19.9618;AC=5;AF=0.0271739;AN=184;AO=69;CIGAR=1X;DP=1792;DPB=1792;DPRA=1.06103;EPP=3.29354;EPPR=17.4393;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9623;NS=92;NUMALT=1;ODDS=2.10556;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2470;QR=63299;RO=1723;RPP=144.282;RPPR=3538.9;RUN=1;SAF=32;SAP=3.79707;SAR=37;SRF=891;SRP=7.39735;SRR=832;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:34.037:9:9:319:0:0:0,-2.70927,-10 0/0:31.0267:8:8:302:0:0:0,-2.40824,-10 0/1:99:19:9:323:10:379:-10,0,-10 0/0:46.0782:13:13:494:0:0:0,-3.91339,-10 0/0:34.037:9:9:321:0:0:0,-2.70927,-10 0/0:34.037:9:9:333:0:0:0,-2.70927,-10 0/0:30.3975:24:23:841:1:38:0,-2.04451,-10 0/0:67.1503:20:20:725:0:0:0,-6.0206,-10 0/0:34.037:9:9:326:0:0:0,-2.70927,-10 0/0:9.9546:1:1:38:0:0:0,-0.30103,-3.8 0/0:37.0473:10:10:327:0:0:0,-3.0103,-10 0/0:49.0885:14:14:515:0:0:0,-4.21442,-10 0/0:97.2504:30:30:1118:0:0:0,-9.0309,-10 0/0:97.2504:30:30:1096:0:0:0,-9.0309,-10 0/0:99:37:37:1383:0:0:0,-10,-10 0/0:70.1606:21:21:766:0:0:0,-6.32163,-10 0/0:97.2504:30:30:1099:0:0:0,-9.0309,-10 0/0:31.0267:8:8:292:0:0:0,-2.40824,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:70.1606:21:21:786:0:0:0,-6.32163,-10 0/0:52.0988:15:15:570:0:0:0,-4.51545,-10 0/0:88.222:27:27:1003:0:0:0,-8.12781,-10 0/0:49.0885:14:14:501:0:0:0,-4.21442,-10 0/0:49.0885:14:14:503:0:0:0,-4.21442,-10 0/0:56.2305:25:24:881:1:15:0,-4.62781,-10 0/0:79.1914:24:24:892:0:0:0,-7.22472,-10 0/0:76.1812:23:23:860:0:0:0,-6.92369,-10 0/0:14.7826:9:8:297:1:14:0,-0.355027,-10 0/0:58.1194:17:17:636:0:0:0,-5.11751,-10 0/0:99:34:34:1285:0:0:0,-10,-10 0/0:31.0267:8:8:302:0:0:0,-2.40824,-10 0/0:52.0988:15:15:569:0:0:0,-4.51545,-10 0/0:40.0576:11:11:400:0:0:0,-3.31133,-10 0/1:0.0357567:9:0:0:9:341:-10,-2.70927,0 0/0:64.14:19:19:719:0:0:0,-5.71957,-10 0/0:21.9958:5:5:181:0:0:0,-1.50515,-10 0/0:28.0164:7:7:259:0:0:0,-2.10721,-10 0/0:99:32:32:1182:0:0:0,-9.63296,-10 0/0:52.0988:15:15:558:0:0:0,-4.51545,-10 0/0:52.0988:15:15:558:0:0:0,-4.51545,-10 0/0:99:36:36:1340:0:0:0,-10,-10 0/0:64.14:19:19:687:0:0:0,-5.71957,-10 0/0:76.1812:23:23:845:0:0:0,-6.92369,-10 0/0:88.222:27:27:981:0:0:0,-8.12781,-10 0/0:88.222:27:27:1011:0:0:0,-8.12781,-10 0/0:49.0885:14:14:499:0:0:0,-4.21442,-10 0/0:99:52:52:1918:0:0:0,-10,-10 0/0:91.232:28:28:1052:0:0:0,-8.42884,-10 0/0:55.1091:16:16:602:0:0:0,-4.81648,-10 0/0:99:34:34:1212:0:0:0,-10,-10 0/0:46.0782:13:13:467:0:0:0,-3.91339,-10 0/0:99:48:48:1739:0:0:0,-10,-10 0/0:61.1297:18:18:654:0:0:0,-5.41854,-10 0/0:21.9958:5:5:190:0:0:0,-1.50515,-10 0/0:99:32:32:1135:0:0:0,-9.63296,-10 0/0:67.1503:20:20:749:0:0:0,-6.0206,-10 0/0:55.1091:16:16:572:0:0:0,-4.81648,-10 0/0:37.0473:10:10:350:0:0:0,-3.0103,-10 1/1:34.9995:24:0:0:24:874:-10,-7.22472,0 0/0:28.0164:7:7:265:0:0:0,-2.10721,-10 0/0:99:32:32:1190:0:0:0,-9.63296,-10 0/0:70.1606:21:21:782:0:0:0,-6.32163,-10 0/0:99:34:34:1232:0:0:0,-10,-10 0/0:79.1914:24:24:886:0:0:0,-7.22472,-10 0/0:40.0576:11:11:416:0:0:0,-3.31133,-10 0/1:99:34:11:415:23:809:-10,0,-10 0/0:70.1606:21:21:789:0:0:0,-6.32163,-10 0/0:37.0473:10:10:347:0:0:0,-3.0103,-10 0/0:99:39:39:1388:0:0:0,-10,-10 0/0:52.0988:15:15:547:0:0:0,-4.51545,-10 0/0:49.0885:14:14:532:0:0:0,-4.21442,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:94.2415:29:29:1049:0:0:0,-8.72987,-10 0/0:64.14:19:19:637:0:0:0,-5.71957,-10 0/0:99:31:31:1097:0:0:0,-9.33193,-10 0/0:46.0782:13:13:477:0:0:0,-3.91339,-10 0/0:49.0885:14:14:527:0:0:0,-4.21442,-10 0/0:40.0576:11:11:405:0:0:0,-3.31133,-10 0/0:31.0267:8:8:290:0:0:0,-2.40824,-10 0/0:40.0576:11:11:412:0:0:0,-3.31133,-10 0/0:76.1812:23:23:874:0:0:0,-6.92369,-10 0/0:97.2504:30:30:1103:0:0:0,-9.0309,-10 0/0:99:32:32:1211:0:0:0,-9.63296,-10 0/0:55.1091:16:16:581:0:0:0,-4.81648,-10 0/0:58.1194:17:17:633:0:0:0,-5.11751,-10 0/0:25.0061:6:6:216:0:0:0,-1.80618,-10 0/0:52.0988:15:15:546:0:0:0,-4.51545,-10 0/0:58.1194:17:17:637:0:0:0,-5.11751,-10 0/0:28.0164:7:7:257:0:0:0,-2.10721,-10 0/0:58.1194:17:17:622:0:0:0,-5.11751,-10 0/0:52.0988:15:15:545:0:0:0,-4.51545,-10 0/0:49.0885:14:14:502:0:0:0,-4.21442,-10 scaffold_56 1484589 . C T 2080.76 . AB=0.387755;ABP=19.0969;AC=8;AF=0.0434783;AN=184;AO=78;CIGAR=1X;DP=1792;DPB=1792;DPRA=1.25616;EPP=4.01252;EPPR=18.0712;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9691;NS=92;NUMALT=1;ODDS=2.92565;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2903;QR=62023;RO=1713;RPP=163.811;RPPR=3508.76;RUN=1;SAF=35;SAP=4.79202;SAR=43;SRF=886;SRP=7.42297;SRR=827;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:42.2528:9:9:342:0:0:0,-2.70927,-10 0/0:39.2425:8:8:299:0:0:0,-2.40824,-10 0/0:72.3558:19:19:703:0:0:0,-5.71957,-10 0/0:54.294:13:13:491:0:0:0,-3.91339,-10 0/0:42.2528:9:9:294:0:0:0,-2.70927,-10 0/0:42.2528:9:9:319:0:0:0,-2.70927,-10 0/0:87.407:24:24:866:0:0:0,-7.22472,-10 0/0:75.3661:20:20:713:0:0:0,-6.0206,-10 0/0:42.2528:9:9:298:0:0:0,-2.70927,-10 0/0:18.1704:1:1:38:0:0:0,-0.30103,-3.8 0/0:45.2631:10:10:323:0:0:0,-3.0103,-10 0/0:57.3043:14:14:521:0:0:0,-4.21442,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:99:30:30:1057:0:0:0,-9.0309,-10 0/0:99:37:37:1315:0:0:0,-10,-10 0/0:78.3763:21:21:731:0:0:0,-6.32163,-10 0/0:99:30:30:1089:0:0:0,-9.0309,-10 0/0:39.2425:8:8:295:0:0:0,-2.40824,-10 0/0:99:31:31:1162:0:0:0,-9.33193,-10 1/1:13.0482:21:0:0:21:777:-10,-6.32163,0 0/1:99:15:9:342:6:228:-10,0,-10 0/1:99:27:17:615:10:378:-10,0,-10 0/0:57.3043:14:14:478:0:0:0,-4.21442,-10 0/0:57.3043:14:14:495:0:0:0,-4.21442,-10 0/0:90.417:25:25:892:0:0:0,-7.52575,-10 0/0:87.407:24:24:899:0:0:0,-7.22472,-10 0/0:84.3968:23:23:846:0:0:0,-6.92369,-10 0/0:42.2528:9:9:314:0:0:0,-2.70927,-10 0/0:66.3352:17:17:645:0:0:0,-5.11751,-10 0/0:99:34:34:1260:0:0:0,-10,-10 0/0:39.2425:8:8:301:0:0:0,-2.40824,-10 0/0:60.3146:15:15:560:0:0:0,-4.51545,-10 0/0:48.2734:11:11:395:0:0:0,-3.31133,-10 0/0:42.2528:9:9:340:0:0:0,-2.70927,-10 0/0:72.3558:19:19:717:0:0:0,-5.71957,-10 0/0:30.2116:5:5:190:0:0:0,-1.50515,-10 0/0:36.2322:7:7:262:0:0:0,-2.10721,-10 0/1:99:32:22:758:10:376:-10,0,-10 0/0:60.3146:15:15:520:0:0:0,-4.51545,-10 0/0:60.3146:15:15:527:0:0:0,-4.51545,-10 0/0:99:36:36:1308:0:0:0,-10,-10 0/0:72.3558:19:19:689:0:0:0,-5.71957,-10 0/0:84.3968:23:23:842:0:0:0,-6.92369,-10 0/0:96.4361:27:27:984:0:0:0,-8.12781,-10 0/0:96.4361:27:27:978:0:0:0,-8.12781,-10 0/0:57.3043:14:14:521:0:0:0,-4.21442,-10 0/0:99:52:52:1898:0:0:0,-10,-10 0/0:99:28:28:1036:0:0:0,-8.42884,-10 0/0:63.3249:16:16:576:0:0:0,-4.81648,-10 0/1:99:35:21:772:14:519:-10,0,-10 0/0:54.294:13:13:442:0:0:0,-3.91339,-10 0/0:99:48:48:1707:0:0:0,-10,-10 0/0:69.3455:18:18:648:0:0:0,-5.41854,-10 0/0:30.2116:5:5:183:0:0:0,-1.50515,-10 0/0:99:32:32:1124:0:0:0,-9.63296,-10 0/0:75.3661:20:20:744:0:0:0,-6.0206,-10 0/0:63.3249:16:16:546:0:0:0,-4.81648,-10 0/0:45.2631:10:10:352:0:0:0,-3.0103,-10 0/0:87.407:24:24:889:0:0:0,-7.22472,-10 0/0:36.2322:7:7:260:0:0:0,-2.10721,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:78.3763:21:21:761:0:0:0,-6.32163,-10 0/0:99:34:33:1211:0:0:0,-9.93399,-10 0/0:87.407:24:24:867:0:0:0,-7.22472,-10 0/0:48.2734:11:11:415:0:0:0,-3.31133,-10 0/0:99:34:34:1239:0:0:0,-10,-10 0/0:78.3763:21:21:757:0:0:0,-6.32163,-10 0/0:45.2631:10:10:368:0:0:0,-3.0103,-10 0/0:99:39:39:1422:0:0:0,-10,-10 0/0:60.3146:15:15:532:0:0:0,-4.51545,-10 0/0:57.3043:14:14:531:0:0:0,-4.21442,-10 0/0:99:32:32:1102:0:0:0,-9.63296,-10 0/0:99:29:29:1015:0:0:0,-8.72987,-10 0/0:72.3558:19:19:631:0:0:0,-5.71957,-10 0/0:99:31:31:1094:0:0:0,-9.33193,-10 0/0:54.294:13:13:489:0:0:0,-3.91339,-10 0/0:54.294:13:13:473:0:0:0,-3.91339,-10 0/0:48.2734:11:11:338:0:0:0,-3.31133,-10 0/0:39.2425:8:8:266:0:0:0,-2.40824,-10 0/0:48.2734:11:11:394:0:0:0,-3.31133,-10 0/0:84.3968:23:23:866:0:0:0,-6.92369,-10 0/0:99:30:30:1118:0:0:0,-9.0309,-10 0/1:99:32:21:791:11:417:-10,0,-10 0/0:63.3249:16:16:603:0:0:0,-4.81648,-10 0/0:66.3352:17:17:620:0:0:0,-5.11751,-10 0/1:0.0320553:6:0:0:6:208:-10,-1.80618,0 0/0:60.3146:15:15:570:0:0:0,-4.51545,-10 0/0:66.3352:17:17:624:0:0:0,-5.11751,-10 0/0:36.2322:7:7:261:0:0:0,-2.10721,-10 0/0:66.3352:17:17:620:0:0:0,-5.11751,-10 0/0:60.3146:15:15:548:0:0:0,-4.51545,-10 0/0:57.3043:14:14:494:0:0:0,-4.21442,-10 scaffold_56 1484609 . G C 540.494 . AB=0.65625;ABP=9.79615;AC=1;AF=0.00537634;AN=186;AO=21;CIGAR=1X;DP=2646;DPB=2646;DPRA=1.12624;EPP=5.59539;EPPR=3.17262;GTI=0;LEN=1;MEANALT=1;MQM=59.9524;MQMR=60;NS=93;NUMALT=1;ODDS=6.2674;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=762;QR=94658;RO=2622;RPP=48.6112;RPPR=5287.32;RUN=1;SAF=13;SAP=5.59539;SAR=8;SRF=1302;SRP=3.27863;SRR=1320;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:27:27:957:0:0:0,-8.12781,-10 0/0:96.4631:24:24:835:0:0:0,-7.22472,-10 0/0:93.4547:23:23:825:0:0:0,-6.92369,-10 0/0:78.4052:18:18:628:0:0:0,-5.41854,-10 0/0:69.3742:15:15:550:0:0:0,-4.51545,-10 0/0:90.4454:22:22:772:0:0:0,-6.62266,-10 0/0:99:51:51:1892:0:0:0,-10,-10 0/0:99:46:46:1712:0:0:0,-10,-10 0/0:81.4155:19:19:691:0:0:0,-5.71957,-10 0/0:57.333:11:11:415:0:0:0,-3.31133,-10 0/0:57.333:12:11:402:0:0:0,-3.31133,-10 0/0:48.3021:8:8:280:0:0:0,-2.40824,-10 0/0:99:45:45:1626:0:0:0,-10,-10 0/0:99:47:47:1655:0:0:0,-10,-10 0/0:99:50:50:1853:0:0:0,-10,-10 0/0:99:37:36:1316:0:0:0,-10,-10 0/0:99:45:45:1595:0:0:0,-10,-10 0/0:66.3639:14:14:515:0:0:0,-4.21442,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:99:57:57:2052:0:0:0,-10,-10 0/0:96.4631:24:24:893:0:0:0,-7.22472,-10 0/0:99:64:63:2275:0:0:0,-10,-10 0/0:60.3433:12:12:437:0:0:0,-3.61236,-10 0/0:99:27:27:986:0:0:0,-8.12781,-10 0/0:99:38:38:1338:0:0:0,-10,-10 0/0:99:28:28:1050:0:0:0,-8.42884,-10 0/0:99:30:30:1045:0:0:0,-9.0309,-10 0/0:90.4454:22:22:797:0:0:0,-6.62266,-10 0/0:75.3948:17:17:592:0:0:0,-5.11751,-10 0/0:99:43:43:1486:0:0:0,-10,-10 0/0:54.3227:10:10:354:0:0:0,-3.0103,-10 0/0:45.2918:7:7:261:0:0:0,-2.10721,-10 0/0:66.3639:14:14:524:0:0:0,-4.21442,-10 0/0:84.4258:20:20:719:0:0:0,-6.0206,-10 0/0:99:25:25:868:0:0:0,-7.52575,-10 0/0:39.2712:5:5:181:0:0:0,-1.50515,-10 0/0:72.3845:16:16:529:0:0:0,-4.81648,-10 0/0:99:36:36:1316:0:0:0,-10,-10 0/0:99:29:29:1069:0:0:0,-8.72987,-10 0/0:87.4361:21:21:738:0:0:0,-6.32163,-10 0/0:99:54:54:1970:0:0:0,-10,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:99:45:45:1647:0:0:0,-10,-10 0/0:99:25:25:919:0:0:0,-7.52575,-10 0/0:99:27:27:969:0:0:0,-8.12781,-10 0/0:99:58:58:2042:0:0:0,-10,-10 0/0:93.4547:23:23:804:0:0:0,-6.92369,-10 0/0:96.4631:24:24:847:0:0:0,-7.22472,-10 0/0:99:51:51:1813:0:0:0,-10,-10 0/0:81.4155:19:19:666:0:0:0,-5.71957,-10 0/0:99:52:52:1885:0:0:0,-10,-10 0/0:69.3742:15:15:509:0:0:0,-4.51545,-10 0/0:33.2506:3:3:114:0:0:0,-0.90309,-10 0/0:99:54:54:1961:0:0:0,-10,-10 0/0:84.4258:20:20:729:0:0:0,-6.0206,-10 0/0:93.4547:23:23:843:0:0:0,-6.92369,-10 0/0:69.3742:15:15:549:0:0:0,-4.51545,-10 0/0:99:27:27:963:0:0:0,-8.12781,-10 0/0:66.3639:14:14:517:0:0:0,-4.21442,-10 0/0:99:54:54:1929:0:0:0,-10,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:99:54:54:1979:0:0:0,-10,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:90.4454:22:22:801:0:0:0,-6.62266,-10 0/0:99:57:57:2029:0:0:0,-10,-10 0/0:99:29:29:1022:0:0:0,-8.72987,-10 0/0:63.3536:13:13:458:0:0:0,-3.91339,-10 0/0:99:41:41:1455:0:0:0,-10,-10 0/0:78.4052:18:18:659:0:0:0,-5.41854,-10 0/0:96.4631:24:24:874:0:0:0,-7.22472,-10 0/0:99:43:43:1552:0:0:0,-10,-10 0/1:99:32:11:416:21:762:-10,0,-10 0/0:93.4547:23:23:817:0:0:0,-6.92369,-10 0/0:99:51:51:1880:0:0:0,-10,-10 0/0:72.3845:16:16:578:0:0:0,-4.81648,-10 0/0:84.4258:20:20:733:0:0:0,-6.0206,-10 0/0:96.4631:24:24:888:0:0:0,-7.22472,-10 0/0:60.3433:12:12:450:0:0:0,-3.61236,-10 0/0:99:26:26:965:0:0:0,-7.82678,-10 0/0:99:52:52:1916:0:0:0,-10,-10 0/0:99:38:38:1391:0:0:0,-10,-10 0/0:99:28:28:957:0:0:0,-8.42884,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:99:37:37:1293:0:0:0,-10,-10 0/0:51.3124:9:9:341:0:0:0,-2.70927,-10 0/0:99:29:29:1008:0:0:0,-8.72987,-10 0/0:90.4454:22:22:832:0:0:0,-6.62266,-10 0/0:54.3227:10:10:370:0:0:0,-3.0103,-10 0/0:99:29:29:990:0:0:0,-8.72987,-10 0/0:99:29:29:1088:0:0:0,-8.72987,-10 0/0:87.4361:21:21:790:0:0:0,-6.32163,-10 scaffold_56 1541230 . A G 382.041 . AB=0.68;ABP=10.0459;AC=1;AF=0.00549451;AN=182;AO=17;CIGAR=1X;DP=1196;DPB=1196;DPRA=1.92143;EPP=3.13803;EPPR=3.42611;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9123;NS=91;NUMALT=1;ODDS=1.31654;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=594;QR=42921;RO=1175;RPP=39.9253;RPPR=2545.81;RUN=1;SAF=9;SAP=3.13803;SAR=8;SRF=581;SRP=3.32262;SRR=594;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:32.4198:10:9:274:0:0:0,-2.70927,-10 0/0:23.3889:6:6:184:0:0:0,-1.80618,-10 0/0:47.4713:14:14:528:0:0:0,-4.21442,-10 0/0:35.4301:10:10:373:0:0:0,-3.0103,-10 0/0:32.4198:9:9:338:0:0:0,-2.70927,-10 0/0:14.358:3:3:112:0:0:0,-0.90309,-10 0/0:89.6151:28:28:1009:0:0:0,-8.42884,-10 0/0:59.5125:18:18:661:0:0:0,-5.41854,-10 0/0:23.3889:6:6:222:0:0:0,-1.80618,-10 0/0:8.33742:1:1:37:0:0:0,-0.30103,-3.7 0/0:35.4301:10:10:355:0:0:0,-3.0103,-10 0/0:26.3992:7:7:260:0:0:0,-2.10721,-10 0/0:59.5125:18:18:667:0:0:0,-5.41854,-10 0/1:99:25:8:304:17:594:-10,0,-10 0/0:59.5125:18:18:653:0:0:0,-5.41854,-10 0/0:53.4919:16:16:593:0:0:0,-4.81648,-10 0/0:59.5125:18:18:650:0:0:0,-5.41854,-10 0/0:35.4301:10:10:372:0:0:0,-3.0103,-10 0/0:47.4713:14:14:526:0:0:0,-4.21442,-10 0/0:62.5228:19:19:707:0:0:0,-5.71957,-10 0/0:44.461:13:13:442:0:0:0,-3.91339,-10 0/0:47.4713:14:14:530:0:0:0,-4.21442,-10 0/0:17.3683:4:4:152:0:0:0,-1.20412,-10 0/0:47.4713:14:14:503:0:0:0,-4.21442,-10 0/0:41.4507:12:12:452:0:0:0,-3.61236,-10 0/0:65.5331:20:20:732:0:0:0,-6.0206,-10 0/0:29.4095:8:8:272:0:0:0,-2.40824,-10 0/0:20.3786:5:5:188:0:0:0,-1.50515,-10 0/0:35.4301:10:10:380:0:0:0,-3.0103,-10 0/0:56.5022:17:17:646:0:0:0,-5.11751,-10 0/0:26.3992:7:7:244:0:0:0,-2.10721,-10 0/0:29.4095:8:8:301:0:0:0,-2.40824,-10 0/0:50.4816:16:15:540:0:0:0,-4.51545,-10 0/0:38.4404:11:11:408:0:0:0,-3.31133,-10 0/0:32.4198:9:9:329:0:0:0,-2.70927,-10 0/0:29.4095:8:8:302:0:0:0,-2.40824,-10 0/0:29.4095:8:8:304:0:0:0,-2.40824,-10 0/0:53.4919:16:16:578:0:0:0,-4.81648,-10 0/0:32.4198:9:9:321:0:0:0,-2.70927,-10 0/0:53.4919:16:16:583:0:0:0,-4.81648,-10 0/0:71.5537:22:22:778:0:0:0,-6.62266,-10 0/0:32.4198:9:9:320:0:0:0,-2.70927,-10 0/0:50.4816:15:15:554:0:0:0,-4.51545,-10 0/0:71.5537:22:22:816:0:0:0,-6.62266,-10 0/0:50.4816:15:15:563:0:0:0,-4.51545,-10 0/0:47.4713:14:14:499:0:0:0,-4.21442,-10 0/0:92.625:29:29:996:0:0:0,-8.72987,-10 0/0:41.4507:12:12:451:0:0:0,-3.61236,-10 0/0:20.3786:5:5:189:0:0:0,-1.50515,-10 0/0:71.5537:22:22:785:0:0:0,-6.62266,-10 0/0:32.4198:9:9:342:0:0:0,-2.70927,-10 0/0:65.5331:20:20:720:0:0:0,-6.0206,-10 0/0:41.4507:12:12:433:0:0:0,-3.61236,-10 0/0:26.3992:7:7:264:0:0:0,-2.10721,-10 0/0:95.6345:30:30:1116:0:0:0,-9.0309,-10 0/0:41.4507:12:12:456:0:0:0,-3.61236,-10 0/0:77.5743:24:24:866:0:0:0,-7.22472,-10 0/0:23.3889:6:6:225:0:0:0,-1.80618,-10 0/0:20.3786:5:5:189:0:0:0,-1.50515,-10 0/0:8.33742:1:1:38:0:0:0,-0.30103,-3.8 0/0:50.4816:15:15:566:0:0:0,-4.51545,-10 0/0:47.4713:14:14:502:0:0:0,-4.21442,-10 0/0:99:32:32:1145:0:0:0,-9.63296,-10 0/0:47.4713:14:14:532:0:0:0,-4.21442,-10 0/0:38.4404:11:11:415:0:0:0,-3.31133,-10 0/0:53.4919:16:16:542:0:0:0,-4.81648,-10 0/0:50.4816:15:15:531:0:0:0,-4.51545,-10 0/0:26.3992:7:7:257:0:0:0,-2.10721,-10 0/0:80.5846:25:25:926:0:0:0,-7.52575,-10 0/0:32.4198:10:9:333:0:0:0,-2.70927,-10 0/0:59.5125:19:18:668:0:0:0,-5.41854,-10 0/0:59.5125:18:18:681:0:0:0,-5.41854,-10 0/0:35.4301:10:10:342:0:0:0,-3.0103,-10 0/0:41.4507:12:12:431:0:0:0,-3.61236,-10 0/0:50.4816:15:15:559:0:0:0,-4.51545,-10 0/0:32.4198:9:9:341:0:0:0,-2.70927,-10 0/0:29.4095:8:8:304:0:0:0,-2.40824,-10 0/0:26.3992:7:7:266:0:0:0,-2.10721,-10 0/0:17.3683:4:4:152:0:0:0,-1.20412,-10 0/0:35.4301:10:10:366:0:0:0,-3.0103,-10 0/0:89.6151:28:28:961:0:0:0,-8.42884,-10 0/0:65.5331:20:20:756:0:0:0,-6.0206,-10 0/0:59.5125:18:18:676:0:0:0,-5.41854,-10 0/0:32.4198:9:9:319:0:0:0,-2.70927,-10 0/0:41.4507:12:12:456:0:0:0,-3.61236,-10 0/0:17.3683:4:4:151:0:0:0,-1.20412,-10 0/0:32.4198:9:9:325:0:0:0,-2.70927,-10 0/0:32.4198:9:9:308:0:0:0,-2.70927,-10 .:.:.:.:.:.:.:. 0/0:59.5125:18:18:670:0:0:0,-5.41854,-10 0/0:44.461:13:13:491:0:0:0,-3.91339,-10 0/0:32.4198:9:9:317:0:0:0,-2.70927,-10 scaffold_56 1541288 . C G 338.689 . AB=0.5;ABP=3.0103;AC=2;AF=0.010989;AN=182;AO=15;CIGAR=1X;DP=1196;DPB=1196;DPRA=1.14494;EPP=3.15506;EPPR=6.73993;GTI=0;LEN=1;MEANALT=1.5;MQM=59.8667;MQMR=59.8702;NS=91;NUMALT=1;ODDS=6.38917;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=539;QR=42700;RO=1179;RPP=35.5824;RPPR=2545.83;RUN=1;SAF=8;SAP=3.15506;SAR=7;SRF=565;SRP=7.43244;SRR=614;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.8632:10:10:302:0:0:0,-3.0103,-10 0/0:42.822:6:6:192:0:0:0,-1.80618,-10 0/0:66.9044:14:14:531:0:0:0,-4.21442,-10 0/0:57.8735:11:11:412:0:0:0,-3.31133,-10 0/0:51.8529:9:9:342:0:0:0,-2.70927,-10 0/0:33.7911:3:3:91:0:0:0,-0.90309,-8.49333 0/0:99:28:28:961:0:0:0,-8.42884,-10 0/0:78.9456:18:18:668:0:0:0,-5.41854,-10 0/0:39.8117:5:5:188:0:0:0,-1.50515,-10 0/0:27.7705:1:1:38:0:0:0,-0.30103,-3.8 0/0:54.8632:10:10:372:0:0:0,-3.0103,-10 0/0:45.8323:7:7:266:0:0:0,-2.10721,-10 0/0:78.9456:18:18:681:0:0:0,-5.41854,-10 0/0:99:25:25:890:0:0:0,-7.52575,-10 0/0:75.9353:17:17:620:0:0:0,-5.11751,-10 0/0:75.9353:17:17:633:0:0:0,-5.11751,-10 0/0:75.9353:17:17:551:0:0:0,-5.11751,-10 0/0:54.8632:10:10:357:0:0:0,-3.0103,-10 0/0:66.9044:14:14:513:0:0:0,-4.21442,-10 0/0:84.9662:20:20:700:0:0:0,-6.0206,-10 0/0:60.8838:12:12:404:0:0:0,-3.61236,-10 0/0:66.9044:14:14:509:0:0:0,-4.21442,-10 0/0:36.8014:4:4:151:0:0:0,-1.20412,-10 0/0:66.9044:14:14:521:0:0:0,-4.21442,-10 0/0:60.8838:12:12:456:0:0:0,-3.61236,-10 0/0:84.9662:20:20:741:0:0:0,-6.0206,-10 0/0:48.8426:8:8:255:0:0:0,-2.40824,-10 0/0:39.8117:5:5:185:0:0:0,-1.50515,-10 0/0:54.8632:10:10:377:0:0:0,-3.0103,-10 0/0:75.9353:17:17:645:0:0:0,-5.11751,-10 0/0:45.8323:7:7:243:0:0:0,-2.10721,-10 0/0:51.8529:9:9:334:0:0:0,-2.70927,-10 0/0:72.925:16:16:564:0:0:0,-4.81648,-10 0/0:60.8838:12:12:451:0:0:0,-3.61236,-10 0/0:48.8426:8:8:293:0:0:0,-2.40824,-10 0/0:51.8529:9:9:342:0:0:0,-2.70927,-10 0/0:48.8426:8:8:304:0:0:0,-2.40824,-10 0/0:72.925:16:16:605:0:0:0,-4.81648,-10 0/0:54.8632:10:10:341:0:0:0,-3.0103,-10 0/0:69.9147:15:15:544:0:0:0,-4.51545,-10 0/0:90.9861:22:22:799:0:0:0,-6.62266,-10 0/0:60.8838:12:12:413:0:0:0,-3.61236,-10 0/0:69.9147:15:15:537:0:0:0,-4.51545,-10 0/0:97.0047:24:24:883:0:0:0,-7.22472,-10 0/0:69.9147:15:15:564:0:0:0,-4.51545,-10 0/0:66.9044:14:14:503:0:0:0,-4.21442,-10 0/0:99:29:29:1008:0:0:0,-8.72987,-10 0/0:57.8735:11:11:416:0:0:0,-3.31133,-10 0/0:39.8117:5:5:186:0:0:0,-1.50515,-10 0/0:97.0047:24:24:847:0:0:0,-7.22472,-10 0/0:51.8529:9:9:318:0:0:0,-2.70927,-10 0/0:78.9456:18:18:647:0:0:0,-5.41854,-10 0/0:60.8838:12:12:433:0:0:0,-3.61236,-10 0/0:45.8323:7:7:243:0:0:0,-2.10721,-10 0/0:99:31:31:1136:0:0:0,-9.33193,-10 0/0:63.8941:13:13:493:0:0:0,-3.91339,-10 0/0:97.0047:24:24:825:0:0:0,-7.22472,-10 0/0:42.822:6:6:200:0:0:0,-1.80618,-10 0/0:39.8117:5:5:185:0:0:0,-1.50515,-10 0/0:27.7705:1:1:38:0:0:0,-0.30103,-3.8 0/1:99:16:8:280:8:280:-10,0,-10 0/0:66.9044:14:14:505:0:0:0,-4.21442,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/1:99:14:6:218:7:259:-10,0,-10 0/0:57.8735:11:11:418:0:0:0,-3.31133,-10 0/0:72.925:16:16:557:0:0:0,-4.81648,-10 0/0:69.9147:15:15:515:0:0:0,-4.51545,-10 0/0:45.8323:7:7:253:0:0:0,-2.10721,-10 0/0:99:25:25:909:0:0:0,-7.52575,-10 0/0:57.8735:11:11:408:0:0:0,-3.31133,-10 0/0:78.9456:18:18:621:0:0:0,-5.41854,-10 0/0:75.9353:17:17:622:0:0:0,-5.11751,-10 0/0:54.8632:10:10:367:0:0:0,-3.0103,-10 0/0:60.8838:12:12:441:0:0:0,-3.61236,-10 0/0:69.9147:15:15:567:0:0:0,-4.51545,-10 0/0:51.8529:9:9:342:0:0:0,-2.70927,-10 0/0:48.8426:8:8:278:0:0:0,-2.40824,-10 0/0:45.8323:7:7:265:0:0:0,-2.10721,-10 0/0:36.8014:4:4:152:0:0:0,-1.20412,-10 0/0:45.8323:7:7:254:0:0:0,-2.10721,-10 0/0:99:27:26:976:0:0:0,-7.82678,-10 0/0:84.9662:20:20:757:0:0:0,-6.0206,-10 0/0:78.9456:18:18:657:0:0:0,-5.41854,-10 0/0:51.8529:9:9:319:0:0:0,-2.70927,-10 0/0:60.8838:12:12:433:0:0:0,-3.61236,-10 0/0:36.8014:4:4:152:0:0:0,-1.20412,-10 0/0:48.8426:8:8:304:0:0:0,-2.40824,-10 0/0:51.8529:9:9:303:0:0:0,-2.70927,-10 .:.:.:.:.:.:.:. 0/0:78.9456:18:18:681:0:0:0,-5.41854,-10 0/0:63.8941:13:13:488:0:0:0,-3.91339,-10 0/0:51.8529:9:9:304:0:0:0,-2.70927,-10 scaffold_56 1562195 . C T 1820.44 . AB=0.866667;ABP=55.5599;AC=8;AF=0.0434783;AN=184;AO=77;CIGAR=1X;DP=1382;DPB=1382;DPRA=1.06764;EPP=4.39215;EPPR=32.4442;GTI=4;LEN=1;MEANALT=1;MQM=58.4545;MQMR=59.5471;NS=92;NUMALT=1;ODDS=0.13493;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2788;QR=43111;RO=1305;RPP=170.214;RPPR=2836.78;RUN=1;SAF=35;SAP=4.39215;SAR=42;SRF=586;SRP=32.4442;SRR=719;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.0152:13:13:440:0:0:0,-3.91339,-10 0/0:25.9431:6:6:186:0:0:0,-1.80618,-10 0/0:40.9946:11:11:396:0:0:0,-3.31133,-10 0/0:25.9431:6:6:225:0:0:0,-1.80618,-10 0/0:68.0873:20:20:679:0:0:0,-6.0206,-10 0/0:13.9019:2:2:76:0:0:0,-0.60206,-7.22 0/0:41.0152:20:19:623:1:16:0,-3.11957,-10 0/0:71.0976:21:21:673:0:0:0,-6.32163,-10 0/0:47.0152:13:13:408:0:0:0,-3.91339,-10 0/0:19.9225:4:4:130:0:0:0,-1.20412,-10 0/0:31.9637:8:8:292:0:0:0,-2.40824,-10 0/0:34.974:9:9:336:0:0:0,-2.70927,-10 0/0:74.1079:22:22:765:0:0:0,-6.62266,-10 0/0:71.0976:21:21:750:0:0:0,-6.32163,-10 0/0:59.0564:17:17:495:0:0:0,-5.11751,-10 0/0:56.0461:16:16:542:0:0:0,-4.81648,-10 0/0:50.0255:14:14:486:0:0:0,-4.21442,-10 0/0:47.0152:13:13:410:0:0:0,-3.91339,-10 0/1:99:11:6:203:5:180:-10,0,-10 0/0:80.1284:24:24:784:0:0:0,-7.22472,-10 0/0:50.0255:14:14:472:0:0:0,-4.21442,-10 0/0:60.7839:27:26:851:1:16:0,-5.09645,-10 0/0:25.9431:6:6:216:0:0:0,-1.80618,-10 0/0:53.0358:15:15:522:0:0:0,-4.51545,-10 0/0:50.0255:14:14:409:0:0:0,-4.21442,-10 0/0:62.0667:18:18:586:0:0:0,-5.41854,-10 0/0:53.0358:15:15:501:0:0:0,-4.51545,-10 1/1:23.0331:18:0:0:18:672:-10,-5.41854,0 0/0:56.0461:16:16:570:0:0:0,-4.81648,-10 0/0:41.0152:20:19:609:1:16:0,-3.11957,-10 0/0:34.974:9:9:314:0:0:0,-2.70927,-10 0/1:0.733449:13:0:0:13:482:-10,-3.91339,0 0/0:56.0461:16:16:504:0:0:0,-4.81648,-10 0/0:25.9431:6:6:199:0:0:0,-1.80618,-10 0/0:59.0564:17:17:557:0:0:0,-5.11751,-10 0/0:28.9534:7:7:227:0:0:0,-2.10721,-10 0/0:37.9843:10:10:349:0:0:0,-3.0103,-10 0/0:62.0667:18:18:594:0:0:0,-5.41854,-10 0/0:47.0152:13:13:444:0:0:0,-3.91339,-10 0/0:50.0255:14:14:505:0:0:0,-4.21442,-10 0/0:80.1284:24:24:774:0:0:0,-7.22472,-10 0/0:40.9946:11:11:386:0:0:0,-3.31133,-10 0/0:40.9946:11:11:357:0:0:0,-3.31133,-10 0/0:65.077:19:19:655:0:0:0,-5.71957,-10 0/0:50.0255:14:14:453:0:0:0,-4.21442,-10 0/0:44.0049:12:12:381:0:0:0,-3.61236,-10 0/0:99:31:31:940:0:0:0,-9.33193,-10 0/0:47.0152:13:13:433:0:0:0,-3.91339,-10 0/0:31.9637:8:8:224:0:0:0,-2.40824,-10 0/0:80.1284:24:24:794:0:0:0,-7.22472,-10 0/0:47.0152:13:13:414:0:0:0,-3.91339,-10 0/0:95.1776:29:29:889:0:0:0,-8.72987,-10 1/1:14.0022:15:0:0:15:564:-10,-4.51545,0 0/0:19.9225:4:4:150:0:0:0,-1.20412,-10 0/0:99:35:35:1206:0:0:0,-10,-10 0/1:0.172079:11:0:0:11:411:-10,-3.31133,0 0/0:50.0255:14:14:451:0:0:0,-4.21442,-10 0/0:31.9637:8:8:246:0:0:0,-2.40824,-10 0/0:37.9843:10:10:357:0:0:0,-3.0103,-10 0/0:25.9431:6:6:189:0:0:0,-1.80618,-10 0/0:86.1488:26:26:916:0:0:0,-7.82678,-10 0/0:40.9946:11:11:341:0:0:0,-3.31133,-10 0/0:89.1588:27:27:872:0:0:0,-8.12781,-10 0/0:65.077:19:19:655:0:0:0,-5.71957,-10 0/0:31.9637:8:8:257:0:0:0,-2.40824,-10 0/0:77.1182:23:23:751:0:0:0,-6.92369,-10 0/0:47.0152:13:13:410:0:0:0,-3.91339,-10 0/0:27.2131:15:14:454:1:16:0,-1.73936,-10 0/0:83.1387:25:25:804:0:0:0,-7.52575,-10 0/0:34.974:9:9:312:0:0:0,-2.70927,-10 0/0:47.0152:13:13:437:0:0:0,-3.91339,-10 0/0:89.1588:27:27:887:0:0:0,-8.12781,-10 0/0:59.0564:17:17:552:0:0:0,-5.11751,-10 0/0:47.0152:13:13:407:0:0:0,-3.91339,-10 0/0:80.1284:24:24:808:0:0:0,-7.22472,-10 0/1:0.0851875:10:0:0:10:377:-10,-3.0103,0 0/0:59.0564:17:17:573:0:0:0,-5.11751,-10 0/0:44.0049:12:12:401:0:0:0,-3.61236,-10 0/0:25.9431:6:6:188:0:0:0,-1.80618,-10 0/0:1.55577:15:14:456:1:38:-0.460641,0,-10 0/0:74.1079:22:22:762:0:0:0,-6.62266,-10 0/0:77.1182:23:23:698:0:0:0,-6.92369,-10 0/0:77.1182:23:23:696:0:0:0,-6.92369,-10 0/0:44.0049:12:12:399:0:0:0,-3.61236,-10 0/0:62.0667:18:18:604:0:0:0,-5.41854,-10 0/0:19.9225:4:4:146:0:0:0,-1.20412,-10 0/0:50.0255:14:14:499:0:0:0,-4.21442,-10 0/0:40.9946:11:11:346:0:0:0,-3.31133,-10 0/0:37.9843:10:10:347:0:0:0,-3.0103,-10 0/0:62.0667:18:18:590:0:0:0,-5.41854,-10 0/0:71.0976:21:21:685:0:0:0,-6.32163,-10 0/0:28.9534:7:7:231:0:0:0,-2.10721,-10 scaffold_56 1593980 . TG T 154.724 . AB=0.333333;ABP=9.52472;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1M1D1M;DP=1363;DPB=1360;DPRA=1.83907;EPP=5.18177;EPPR=3.08917;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9244;NS=92;NUMALT=1;ODDS=9.83418;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=290;QR=48892;RO=1349;RPP=22.5536;RPPR=2735.96;RUN=1;SAF=6;SAP=5.18177;SAR=3;SRF=693;SRP=5.21397;SRR=656;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:69.8031:13:13:487:0:0:0,-3.91339,-10 0|0:57.7619:9:9:338:0:0:0,-2.70927,-10 0|0:78.8339:16:16:600:0:0:0,-4.81648,-10 0|0:60.7722:10:10:376:0:0:0,-3.0103,-10 0|0:66.7928:12:12:431:0:0:0,-3.61236,-10 0|0:45.7207:5:5:190:0:0:0,-1.50515,-10 0|0:69.8031:13:13:475:0:0:0,-3.91339,-10 0|0:99:26:26:970:0:0:0,-7.82678,-10 0|0:63.7825:11:11:399:0:0:0,-3.31133,-10 0|0:45.7207:5:5:181:0:0:0,-1.50515,-10 0|0:54.7516:8:8:284:0:0:0,-2.40824,-10 0|0:51.7413:7:7:262:0:0:0,-2.10721,-10 0|0:99:26:26:916:0:0:0,-7.82678,-10 0|0:66.7928:13:12:431:0:0:0,-3.61236,-10 0|0:69.8031:13:13:490:0:0:0,-3.91339,-10 0|0:87.8647:19:19:668:0:0:0,-5.71957,-10 0|0:99:27:27:955:0:0:0,-8.12781,-10 0|0:54.7516:8:8:304:0:0:0,-2.40824,-10 0|0:78.8339:16:16:587:0:0:0,-4.81648,-10 0|0:99:24:24:885:0:0:0,-7.22472,-10 0|0:69.8031:13:13:437:0:0:0,-3.91339,-10 0|0:84.8546:18:18:651:0:0:0,-5.41854,-10 0|0:54.7516:8:8:278:0:0:0,-2.40824,-10 0|0:81.8443:17:17:638:0:0:0,-5.11751,-10 0|0:81.8443:17:17:609:0:0:0,-5.11751,-10 0|0:75.8237:15:15:566:0:0:0,-4.51545,-10 0|0:72.8134:14:14:514:0:0:0,-4.21442,-10 0|0:54.7516:8:8:297:0:0:0,-2.40824,-10 0|0:69.8031:13:13:445:0:0:0,-3.91339,-10 0|0:72.8134:14:14:489:0:0:0,-4.21442,-10 0|0:48.731:6:6:223:0:0:0,-1.80618,-10 0|0:42.7104:4:4:150:0:0:0,-1.20412,-10 0|0:60.7722:10:10:364:0:0:0,-3.0103,-10 0|0:57.7619:10:9:334:0:0:0,-2.70927,-10 0|0:78.8339:16:16:577:0:0:0,-4.81648,-10 0|0:48.731:6:6:226:0:0:0,-1.80618,-10 0|0:54.7516:8:8:266:0:0:0,-2.40824,-10 0|0:99:28:27:1008:0:0:0,-8.12781,-10 0|0:72.8134:14:14:505:0:0:0,-4.21442,-10 0|0:57.7619:9:9:296:0:0:0,-2.70927,-10 0|0:96.8942:22:22:817:0:0:0,-6.62266,-10 0|0:54.7516:8:8:263:0:0:0,-2.40824,-10 0|0:72.8134:14:14:465:0:0:0,-4.21442,-10 0|0:99:27:27:978:0:0:0,-8.12781,-10 0|0:72.8134:14:14:494:0:0:0,-4.21442,-10 0|0:75.8237:15:15:535:0:0:0,-4.51545,-10 0|0:99:30:30:1094:0:0:0,-9.0309,-10 0|0:93.8847:22:21:744:0:0:0,-6.32163,-10 0|0:54.7516:8:8:280:0:0:0,-2.40824,-10 0|1:99:27:18:646:9:290:-10,0,-10 0|0:75.8237:15:15:546:0:0:0,-4.51545,-10 0|0:99:24:24:868:0:0:0,-7.22472,-10 0|0:51.7413:7:7:245:0:0:0,-2.10721,-10 0|0:51.7413:7:7:263:0:0:0,-2.10721,-10 0|0:99:32:32:1132:0:0:0,-9.63296,-10 0|0:54.7516:8:8:281:0:0:0,-2.40824,-10 0|0:93.8847:21:21:739:0:0:0,-6.32163,-10 0|0:72.8134:14:14:512:0:0:0,-4.21442,-10 0|0:60.7722:10:10:363:0:0:0,-3.0103,-10 0|0:63.7825:11:11:412:0:0:0,-3.31133,-10 0|0:90.8748:20:20:715:0:0:0,-6.0206,-10 0|0:57.7619:9:9:323:0:0:0,-2.70927,-10 0|0:99:27:27:1021:0:0:0,-8.12781,-10 0|0:81.8443:17:17:641:0:0:0,-5.11751,-10 0|0:75.8237:15:15:543:0:0:0,-4.51545,-10 0|0:99:26:26:932:0:0:0,-7.82678,-10 0|0:72.8134:14:14:495:0:0:0,-4.21442,-10 0|0:66.7928:12:12:441:0:0:0,-3.61236,-10 0|0:81.8443:17:17:628:0:0:0,-5.11751,-10 0|0:51.7413:7:7:239:0:0:0,-2.10721,-10 0|0:78.8339:16:16:594:0:0:0,-4.81648,-10 0|0:81.8443:17:17:622:0:0:0,-5.11751,-10 0|0:81.8443:17:17:614:0:0:0,-5.11751,-10 0|0:54.7516:8:8:292:0:0:0,-2.40824,-10 0|0:84.8546:18:18:648:0:0:0,-5.41854,-10 0|0:63.7825:11:11:406:0:0:0,-3.31133,-10 0|0:60.7722:11:10:372:0:0:0,-3.0103,-10 0|0:69.8031:13:13:455:0:0:0,-3.91339,-10 0|0:54.7516:8:8:276:0:0:0,-2.40824,-10 0|0:48.731:6:6:210:0:0:0,-1.80618,-10 0|0:99:25:25:902:0:0:0,-7.52575,-10 0|0:99:26:26:963:0:0:0,-7.82678,-10 0|0:99:24:24:903:0:0:0,-7.22472,-10 0|0:84.8546:18:18:653:0:0:0,-5.41854,-10 0|0:99:25:25:917:0:0:0,-7.52575,-10 0|0:60.7722:10:10:372:0:0:0,-3.0103,-10 0|0:60.7722:10:10:373:0:0:0,-3.0103,-10 0|0:75.8237:15:15:519:0:0:0,-4.51545,-10 0|0:45.7207:5:5:189:0:0:0,-1.50515,-10 0|0:90.8748:20:20:725:0:0:0,-6.0206,-10 0|0:75.8237:15:15:523:0:0:0,-4.51545,-10 0|0:78.8339:16:16:607:0:0:0,-4.81648,-10 scaffold_56 1680089 . A C 913.879 . AB=0.507042;ABP=3.04088;AC=5;AF=0.0271739;AN=184;AO=36;CIGAR=1X;DP=1168;DPB=1168;DPRA=1.12616;EPP=3.25157;EPPR=3.0796;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=5.46422;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1345;QR=41382;RO=1128;RPP=81.1833;RPPR=2374.88;RUN=1;SAF=17;SAP=3.25157;SAR=19;SRF=558;SRP=3.28751;SRR=570;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.8693:8:8:304:0:0:0,-2.40824,-10 0/0:41.8693:8:8:302:0:0:0,-2.40824,-10 0/0:77.9929:20:20:731:0:0:0,-6.0206,-10 0/0:38.859:7:7:242:0:0:0,-2.10721,-10 0/0:44.8796:9:9:338:0:0:0,-2.70927,-10 0/0:32.8384:5:5:181:0:0:0,-1.50515,-10 0/1:99:20:8:280:12:449:-10,0,-10 0/0:56.9208:13:13:491:0:0:0,-3.91339,-10 0/0:53.9105:12:12:456:0:0:0,-3.61236,-10 0/0:32.8384:5:5:178:0:0:0,-1.50515,-10 0/0:32.8384:5:5:181:0:0:0,-1.50515,-10 0/0:23.8075:2:2:54:0:0:0,-0.60206,-5.13 0/0:87.0238:23:23:815:0:0:0,-6.92369,-10 0/0:84.0134:22:22:829:0:0:0,-6.62266,-10 0/0:68.962:17:17:644:0:0:0,-5.11751,-10 0/0:62.9414:16:15:566:0:0:0,-4.51545,-10 0/0:59.9311:14:14:523:0:0:0,-4.21442,-10 0/0:32.8384:5:5:190:0:0:0,-1.50515,-10 0/0:44.8796:9:9:324:0:0:0,-2.70927,-10 0/0:87.0238:23:23:838:0:0:0,-6.92369,-10 0/0:59.9311:14:14:532:0:0:0,-4.21442,-10 0/0:74.9826:19:19:698:0:0:0,-5.71957,-10 0/0:26.8178:3:3:114:0:0:0,-0.90309,-10 0/0:77.9929:20:20:738:0:0:0,-6.0206,-10 0/0:65.9517:16:16:599:0:0:0,-4.81648,-10 0/0:81.0031:21:21:757:0:0:0,-6.32163,-10 0/0:50.9002:11:11:383:0:0:0,-3.31133,-10 0/0:44.8796:9:9:341:0:0:0,-2.70927,-10 0/0:44.8796:9:9:338:0:0:0,-2.70927,-10 0/0:93.0442:26:25:919:0:0:0,-7.52575,-10 0/0:44.8796:9:9:342:0:0:0,-2.70927,-10 0/0:38.859:7:7:266:0:0:0,-2.10721,-10 0/0:59.9311:14:14:529:0:0:0,-4.21442,-10 0/0:38.859:7:7:263:0:0:0,-2.10721,-10 0/0:41.8693:8:8:271:0:0:0,-2.40824,-10 0/0:44.8796:9:9:317:0:0:0,-2.70927,-10 0/0:26.8178:3:3:114:0:0:0,-0.90309,-10 0/0:62.9414:15:15:565:0:0:0,-4.51545,-10 0/0:41.8693:9:8:304:0:0:0,-2.40824,-10 0/0:41.8693:8:8:301:0:0:0,-2.40824,-10 0/0:62.9414:15:15:568:0:0:0,-4.51545,-10 0/0:56.9208:13:13:471:0:0:0,-3.91339,-10 0/0:50.9002:11:11:404:0:0:0,-3.31133,-10 0/0:71.9723:18:18:675:0:0:0,-5.41854,-10 0/0:65.9517:16:16:593:0:0:0,-4.81648,-10 0/0:44.8796:9:9:342:0:0:0,-2.70927,-10 0/0:87.0238:23:23:837:0:0:0,-6.92369,-10 0/0:62.9414:15:15:512:0:0:0,-4.51545,-10 0/0:38.859:7:7:256:0:0:0,-2.10721,-10 0/0:87.0238:23:23:855:0:0:0,-6.92369,-10 0/0:41.8693:8:8:301:0:0:0,-2.40824,-10 0/0:87.0238:23:23:862:0:0:0,-6.92369,-10 0/0:35.8487:6:6:223:0:0:0,-1.80618,-10 0/0:32.8384:5:5:163:0:0:0,-1.50515,-10 0/0:99:27:27:946:0:0:0,-8.12781,-10 0/0:38.859:7:7:266:0:0:0,-2.10721,-10 0/0:62.9414:15:15:560:0:0:0,-4.51545,-10 0/0:53.9105:12:12:404:0:0:0,-3.61236,-10 0/0:62.9414:15:15:514:0:0:0,-4.51545,-10 0/0:41.8693:9:8:286:0:0:0,-2.40824,-10 0/1:99:27:15:542:12:452:-10,0,-10 0/0:53.9105:12:12:421:0:0:0,-3.61236,-10 0/0:71.9723:18:18:615:0:0:0,-5.41854,-10 0/1:32.8164:8:6:225:2:67:-5.40392,0,-10 0/0:53.9105:12:12:440:0:0:0,-3.61236,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:74.9826:19:19:694:0:0:0,-5.71957,-10 0/0:32.8384:5:5:189:0:0:0,-1.50515,-10 0/0:71.9723:18:18:660:0:0:0,-5.41854,-10 0/0:50.9002:11:11:414:0:0:0,-3.31133,-10 0/0:41.8693:8:8:299:0:0:0,-2.40824,-10 0/0:68.962:17:17:644:0:0:0,-5.11751,-10 0/0:56.9208:13:13:482:0:0:0,-3.91339,-10 0/0:65.9517:16:16:590:0:0:0,-4.81648,-10 0/0:74.9826:19:19:719:0:0:0,-5.71957,-10 0/1:80.8663:6:1:38:5:187:-10,0,-2.77197 0/0:44.8796:9:9:318:0:0:0,-2.70927,-10 0/0:29.8281:4:4:127:0:0:0,-1.20412,-10 0/0:38.859:7:7:241:0:0:0,-2.10721,-10 0/0:35.8487:6:6:228:0:0:0,-1.80618,-10 0/0:74.9826:19:19:702:0:0:0,-5.71957,-10 0/0:74.9826:19:19:673:0:0:0,-5.71957,-10 0/0:68.962:17:17:626:0:0:0,-5.11751,-10 0/0:50.9002:11:11:410:0:0:0,-3.31133,-10 0/1:99:10:5:190:5:190:-10,0,-10 0/0:29.8281:4:4:147:0:0:0,-1.20412,-10 0/0:47.8899:10:10:379:0:0:0,-3.0103,-10 0/0:35.8487:6:6:221:0:0:0,-1.80618,-10 0/0:29.8281:4:4:141:0:0:0,-1.20412,-10 0/0:53.9105:12:12:454:0:0:0,-3.61236,-10 0/0:68.962:17:17:617:0:0:0,-5.11751,-10 0/0:71.9723:18:18:656:0:0:0,-5.41854,-10 scaffold_56 1701159 . G A 313.13 . AB=0.695652;ABP=10.6577;AC=2;AF=0.0108696;AN=184;AO=17;CIGAR=1X;DP=1830;DPB=1830;DPRA=0.629092;EPP=31.7504;EPPR=3.39858;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9724;NS=92;NUMALT=1;ODDS=9.74297;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=632;QR=65665;RO=1812;RPP=39.9253;RPPR=3911.7;RUN=1;SAF=16;SAP=31.7504;SAR=1;SRF=918;SRP=3.70057;SRR=894;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:21:21:783:0:0:0,-6.32163,-10 0/1:1.65856e-06:8:0:0:8:296:-10,-2.40824,0 0/0:67.9599:10:10:364:0:0:0,-3.0103,-10 0/0:95.0493:19:19:665:0:0:0,-5.71957,-10 0/0:86.0213:16:16:602:0:0:0,-4.81648,-10 0/0:58.929:7:7:256:0:0:0,-2.10721,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:99:26:26:945:0:0:0,-7.82678,-10 0/0:98.0562:20:20:709:0:0:0,-6.0206,-10 0/0:46.8878:3:3:113:0:0:0,-0.90309,-10 0/0:58.929:7:7:259:0:0:0,-2.10721,-10 0/0:52.9084:5:5:190:0:0:0,-1.50515,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:99:32:32:1123:0:0:0,-9.63296,-10 0/0:99:27:27:972:0:0:0,-8.12781,-10 0/0:95.0493:19:19:668:0:0:0,-5.71957,-10 0/0:99:26:26:984:0:0:0,-7.82678,-10 0/0:76.9908:13:13:487:0:0:0,-3.91339,-10 0/0:99:33:33:1194:0:0:0,-9.93399,-10 0/0:99:23:23:854:0:0:0,-6.92369,-10 0/0:89.0312:17:17:629:0:0:0,-5.11751,-10 0/0:99:34:34:1240:0:0:0,-10,-10 0/0:64.9496:9:9:332:0:0:0,-2.70927,-10 0/0:99:23:23:834:0:0:0,-6.92369,-10 0/0:99:30:30:1122:0:0:0,-9.0309,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:99:21:21:717:0:0:0,-6.32163,-10 0/0:99:22:22:806:0:0:0,-6.62266,-10 0/0:99:39:39:1386:0:0:0,-10,-10 0/0:46.8878:3:3:86:0:0:0,-0.90309,-8.02667 0/0:58.929:7:7:243:0:0:0,-2.10721,-10 0/0:99:22:22:774:0:0:0,-6.62266,-10 0/0:80.001:14:14:458:0:0:0,-4.21442,-10 0/0:92.0406:18:18:637:0:0:0,-5.41854,-10 0/0:52.9084:5:5:139:0:0:0,-1.50515,-10 0/0:86.0213:16:16:546:0:0:0,-4.81648,-10 0/0:95.0493:19:19:665:0:0:0,-5.71957,-10 0/0:95.0493:19:19:666:0:0:0,-5.71957,-10 0/0:86.0213:16:16:520:0:0:0,-4.81648,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:92.0406:18:18:643:0:0:0,-5.41854,-10 0/0:98.0562:20:20:755:0:0:0,-6.0206,-10 0/0:99:36:36:1296:0:0:0,-10,-10 0/0:99:22:22:817:0:0:0,-6.62266,-10 0/0:64.9496:9:9:318:0:0:0,-2.70927,-10 0/0:99:55:55:2033:0:0:0,-10,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:80.001:14:14:512:0:0:0,-4.21442,-10 0/0:99:38:38:1420:0:0:0,-10,-10 0/0:80.001:14:14:502:0:0:0,-4.21442,-10 0/0:99:40:40:1464:0:0:0,-10,-10 0/0:80.001:14:14:514:0:0:0,-4.21442,-10 0/0:46.8878:3:3:114:0:0:0,-0.90309,-10 0/0:99:44:44:1600:0:0:0,-10,-10 0/0:76.9908:13:13:453:0:0:0,-3.91339,-10 0/0:99:23:23:826:0:0:0,-6.92369,-10 0/0:58.929:7:7:263:0:0:0,-2.10721,-10 0/0:89.0312:17:17:642:0:0:0,-5.11751,-10 0/0:0.000254908:15:14:514:1:35:-0.160641,0,-10 0/0:99:37:37:1335:0:0:0,-10,-10 0/0:76.9908:13:13:447:0:0:0,-3.91339,-10 0/0:99:56:55:2028:0:0:0,-10,-10 0/0:99:23:23:832:0:0:0,-6.92369,-10 0/0:61.9393:8:8:243:0:0:0,-2.40824,-10 0/0:99:40:40:1497:0:0:0,-10,-10 0/0:80.001:14:14:530:0:0:0,-4.21442,-10 0/0:61.9393:8:8:301:0:0:0,-2.40824,-10 0/0:99:38:38:1344:0:0:0,-10,-10 0/0:61.9393:8:8:284:0:0:0,-2.40824,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 0/0:99:28:28:1018:0:0:0,-8.42884,-10 0/0:92.0406:18:18:656:0:0:0,-5.41854,-10 0/0:92.0406:18:18:657:0:0:0,-5.41854,-10 0/0:99:31:31:1105:0:0:0,-9.33193,-10 0/0:70.9702:11:11:409:0:0:0,-3.31133,-10 0/0:89.0312:17:17:633:0:0:0,-5.11751,-10 0/0:73.9805:12:12:442:0:0:0,-3.61236,-10 0/0:58.929:7:7:260:0:0:0,-2.10721,-10 0/0:64.9496:9:9:308:0:0:0,-2.70927,-10 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:99:24:24:845:0:0:0,-7.22472,-10 0/0:99:24:24:863:0:0:0,-7.22472,-10 0/0:99:26:26:926:0:0:0,-7.82678,-10 0/0:86.0213:16:16:594:0:0:0,-4.81648,-10 0/0:43.8775:2:2:74:0:0:0,-0.60206,-7.03 0/0:76.9908:13:13:443:0:0:0,-3.91339,-10 0/0:76.9908:13:13:466:0:0:0,-3.91339,-10 0/0:43.8775:2:2:75:0:0:0,-0.60206,-7.125 0/0:64.9496:9:9:340:0:0:0,-2.70927,-10 0/1:99:15:7:264:8:301:-10,0,-10 0/0:58.929:7:7:242:0:0:0,-2.10721,-10 scaffold_56 1701182 . C T 8823.06 . AB=0.479381;ABP=3.72666;AC=29;AF=0.157609;AN=184;AO=317;CIGAR=1X;DP=1830;DPB=1830;DPRA=1.13739;EPP=6.03118;EPPR=3.47562;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9669;NS=92;NUMALT=1;ODDS=0.365514;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11651;QR=55443;RO=1512;RPP=691.367;RPPR=3268.93;RUN=1;SAF=169;SAP=6.03118;SAR=148;SRF=763;SRP=3.29179;SRR=749;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.6755:21:21:787:0:0:0,-6.32163,-10 0/0:25.5416:8:8:295:0:0:0,-2.40824,-10 0/0:31.5622:10:10:375:0:0:0,-3.0103,-10 0/0:58.6549:19:19:662:0:0:0,-5.71957,-10 0/0:49.624:16:16:594:0:0:0,-4.81648,-10 0/0:22.5313:7:7:263:0:0:0,-2.10721,-10 0/0:99:34:34:1262:0:0:0,-10,-10 0/0:79.7269:26:26:977:0:0:0,-7.82678,-10 0/0:61.6652:20:20:709:0:0:0,-6.0206,-10 0/0:10.4901:3:3:114:0:0:0,-0.90309,-10 0/0:22.5313:7:7:261:0:0:0,-2.10721,-10 0/0:16.5107:5:5:190:0:0:0,-1.50515,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:94.778:32:31:1110:0:0:0,-9.33193,-10 0/0:82.7371:27:27:1000:0:0:0,-8.12781,-10 0/0:58.6549:19:19:681:0:0:0,-5.71957,-10 0/0:79.7269:26:26:983:0:0:0,-7.82678,-10 0/0:40.5931:13:13:492:0:0:0,-3.91339,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:70.6961:23:23:832:0:0:0,-6.92369,-10 0/0:52.6343:17:17:630:0:0:0,-5.11751,-10 0/0:99:34:34:1264:0:0:0,-10,-10 0/0:28.5519:9:9:338:0:0:0,-2.70927,-10 0/1:99:23:12:428:11:395:-10,0,-10 1/1:69.9196:30:0:0:30:1105:-10,-9.0309,0 0/1:99:26:16:570:10:378:-10,0,-10 0/0:82.7371:27:27:1004:0:0:0,-8.12781,-10 1/1:39.8166:20:0:0:20:714:-10,-6.0206,0 1/1:45.8372:22:0:0:22:790:-10,-6.62266,0 0/0:99:39:39:1393:0:0:0,-10,-10 0/1:0.0087481:3:0:0:3:113:-10,-0.90309,0 0/0:22.5313:7:7:254:0:0:0,-2.10721,-10 1/1:45.8372:22:0:0:22:822:-10,-6.62266,0 0/0:43.6034:14:14:518:0:0:0,-4.21442,-10 0/0:55.6446:18:18:662:0:0:0,-5.41854,-10 0/0:16.5107:5:5:170:0:0:0,-1.50515,-10 0/0:49.624:16:16:590:0:0:0,-4.81648,-10 0/0:58.6549:19:19:666:0:0:0,-5.71957,-10 1/1:36.8063:19:0:0:19:706:-10,-5.71957,0 0/0:49.624:16:16:520:0:0:0,-4.81648,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/0:55.6446:18:18:661:0:0:0,-5.41854,-10 0/0:61.6652:20:20:744:0:0:0,-6.0206,-10 0/0:99:36:36:1339:0:0:0,-10,-10 0/0:73.7064:24:24:890:0:0:0,-7.22472,-10 0/1:0.598757:9:0:0:9:332:-10,-2.70927,0 1/1:99:55:0:0:55:2039:-10,-10,0 0/0:64.6755:21:21:798:0:0:0,-6.32163,-10 0/0:43.6034:14:14:526:0:0:0,-4.21442,-10 0/0:99:38:38:1355:0:0:0,-10,-10 1/1:21.7548:14:0:0:14:525:-10,-4.21442,0 0/1:99:40:23:846:17:628:-10,0,-10 0/0:43.6034:14:14:502:0:0:0,-4.21442,-10 0/1:0.0087481:3:0:0:3:114:-10,-0.90309,0 0/1:99:43:26:973:17:625:-10,0,-10 0/0:40.5931:13:13:475:0:0:0,-3.91339,-10 0/1:99:23:13:486:10:354:-10,0,-10 0/0:22.5313:7:7:265:0:0:0,-2.10721,-10 0/0:52.6343:17:17:633:0:0:0,-5.11751,-10 1/1:21.7548:14:0:0:14:528:-10,-4.21442,0 0/0:99:37:37:1382:0:0:0,-10,-10 0/0:40.5931:13:13:475:0:0:0,-3.91339,-10 0/0:99:56:56:2094:0:0:0,-10,-10 0/0:70.6961:23:23:790:0:0:0,-6.92369,-10 0/0:25.5416:8:8:274:0:0:0,-2.40824,-10 0/0:99:40:40:1479:0:0:0,-10,-10 0/0:43.6034:14:14:505:0:0:0,-4.21442,-10 0/0:25.5416:8:8:280:0:0:0,-2.40824,-10 0/0:99:38:38:1342:0:0:0,-10,-10 0/0:25.5416:8:8:276:0:0:0,-2.40824,-10 0/0:82.7371:27:27:1014:0:0:0,-8.12781,-10 0/0:85.7475:28:28:1006:0:0:0,-8.42884,-10 0/0:55.6446:18:18:681:0:0:0,-5.41854,-10 0/0:55.6446:18:18:680:0:0:0,-5.41854,-10 0/0:94.778:31:31:1145:0:0:0,-9.33193,-10 1/1:12.7239:11:0:0:11:380:-10,-3.31133,0 1/1:30.7857:17:0:0:17:639:-10,-5.11751,0 0/0:37.5828:12:12:441:0:0:0,-3.61236,-10 0/0:22.5313:7:7:265:0:0:0,-2.10721,-10 0/0:28.5519:9:9:316:0:0:0,-2.70927,-10 0/0:91.7665:30:30:1131:0:0:0,-9.0309,-10 0/1:99:24:11:406:13:464:-10,0,-10 0/0:73.7064:24:24:828:0:0:0,-7.22472,-10 0/0:79.7269:26:26:976:0:0:0,-7.82678,-10 0/0:49.624:16:16:558:0:0:0,-4.81648,-10 0/0:7.47979:2:2:73:0:0:0,-0.60206,-6.935 0/0:40.5931:13:13:451:0:0:0,-3.91339,-10 0/0:40.5931:13:13:485:0:0:0,-3.91339,-10 0/0:7.47979:2:2:76:0:0:0,-0.60206,-7.22 0/0:28.5519:9:9:339:0:0:0,-2.70927,-10 0/0:46.6137:15:15:565:0:0:0,-4.51545,-10 0/0:22.5313:7:7:264:0:0:0,-2.10721,-10 scaffold_56 1730446 . T C,G 887.743 . AB=0.337349,0.769231;ABP=22.0826,11.1951;AC=3,1;AF=0.0163043,0.00543478;AN=184,184;AO=29,11;CIGAR=1X,1X;DP=1750,1750;DPB=1750,1750;DPRA=1.42776,0.421563;EPP=12.0706,3.20771;EPPR=3.03062,3.03062;GTI=1,1;LEN=1,1;MEANALT=1,1;MQM=59.7241,56.2727;MQMR=59.9351,59.9351;NS=92,92;NUMALT=2,2;ODDS=0.126599,0.126599;PAIRED=0,0;PAIREDR=0,0;PAO=0,0;PQA=0,0;PQR=0,0;PRO=0,0;QA=1082,385;QR=62186,62186;RO=1710,1710;RPP=65.983,26.8965;RPPR=3716.23,3716.23;RUN=1,1;SAF=9,5;SAP=12.0706,3.20771;SAR=20,6;SRF=857,857;SRP=3.03062,3.03062;SRR=853,853;TYPE=snp,snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:61.6811:12:12:450:0,0:0,0:0,-3.61236,-10,-3.61236,-10,-10 0|0:52.6503:9:9:314:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:94.7908:23:23:834:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:46.6297:7:7:266:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|0:73.7223:16:16:583:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:49.64:8:8:281:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:99:37:37:1320:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:85.7635:20:20:721:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:99:25:25:919:0,0:0,0:0,-7.52575,-10,-7.52575,-10,-10 0|0:31.5782:2:2:72:0,0:0,0:0,-0.60206,-6.84,-0.60206,-6.84,-6.84 0|0:52.6503:9:9:329:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:34.5885:3:3:111:0,0:0,0:0,-0.90309,-10,-0.90309,-10,-10 0|0:99:27:27:988:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:91.7838:22:22:803:0,0:0,0:0,-6.62266,-10,-6.62266,-10,-10 0|0:99:33:33:1219:0,0:0,0:0,-9.93399,-10,-9.93399,-10,-10 0|0:91.7838:22:22:804:0,0:0,0:0,-6.62266,-10,-6.62266,-10,-10 0|0:94.7908:23:23:836:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:58.6708:11:11:417:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:99:26:26:977:0,0:0,0:0,-7.82678,-10,-7.82678,-10,-10 0|1:99:27:19:677:8,0:302,0:-10,0,-10,-10,-10,-10 0|0:70.712:15:15:530:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|1:99:30:19:686:11,0:414,0:-10,0,-10,-10,-10,-10 0|0:49.64:8:8:304:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:91.7838:22:22:809:0,0:0,0:0,-6.62266,-10,-6.62266,-10,-10 0|0:94.7908:23:23:844:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:47.1409:24:23:852:1,0:35,0:0,-2.34451,-10,-6.92369,-10,-10 0|0:99:28:28:966:0,0:0,0:0,-8.42884,-10,-8.42884,-10,-10 0|0:64.6914:13:13:436:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:91.7838:22:22:817:0,0:0,0:0,-6.62266,-10,-6.62266,-10,-10 0|0:99:42:42:1553:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:40.6091:5:5:190:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:37.5988:4:4:147:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:73.7223:16:16:590:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:70.712:15:15:556:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:73.7223:16:16:595:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:58.6708:11:11:396:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:79.7428:18:18:673:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|1:99:26:17:634:9,0:331,0:-10,0,-10,-10,-10,-10 0|0:70.712:15:15:561:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:79.7428:18:18:643:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:99:25:25:891:0,0:0,0:0,-7.52575,-10,-7.52575,-10,-10 0|0:79.7428:18:18:661:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:76.7326:17:17:615:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:99:35:35:1277:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:70.712:15:15:526:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:58.6708:11:11:414:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:99:32:32:1180:0,0:0,0:0,-9.63296,-10,-9.63296,-10,-10 0|0:82.753:19:19:696:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:67.7017:14:14:525:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:99:52:52:1882:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:61.6811:12:12:429:0,0:0,0:0,-3.61236,-10,-3.61236,-10,-10 0|0:99:40:40:1482:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:79.7428:18:18:642:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:34.5885:3:3:111:0,0:0,0:0,-0.90309,-10,-0.90309,-10,-10 0|0:99:43:43:1521:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:82.753:19:19:683:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:82.753:19:19:661:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:49.64:8:8:294:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:76.7326:17:17:644:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:67.7017:14:14:506:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:99:32:32:1177:0,0:0,0:0,-9.63296,-10,-9.63296,-10,-10 0|0:76.7326:17:17:644:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:99:27:27:988:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:82.753:19:19:722:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:64.6914:13:13:484:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:94.7908:23:23:821:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:94.7908:23:23:821:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:55.6606:10:10:369:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:99:27:27:965:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:67.7017:14:14:478:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:55.6606:10:10:349:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:99:27:27:1000:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:91.7838:22:22:794:0,0:0,0:0,-6.62266,-10,-6.62266,-10,-10 0|0:97.7975:24:24:894:0,0:0,0:0,-7.22472,-10,-7.22472,-10,-10 0|0:99:26:26:871:0,0:0,0:0,-7.82678,-10,-7.82678,-10,-10 0|0:76.7326:17:17:632:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:52.6503:9:9:324:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:76.7326:17:17:637:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:49.64:8:8:279:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:52.6503:9:9:333:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:99:41:41:1512:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:99:35:35:1221:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:88.7737:21:21:791:0,0:0,0:0,-6.32163,-10,-6.32163,-10,-10 0|0:82.753:19:19:669:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:99:25:25:930:0,0:0,0:0,-7.52575,-10,-7.52575,-10,-10 0|0:37.5988:4:4:145:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:55.6606:10:10:350:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:73.7223:16:16:593:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:2.73424:3:2:75:0,1:0,38:-3.37403,-3.97609,-10,0,-7.00006,-6.69903 0|0:55.6606:10:10:380:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|2:99:13:3:104:0,10:0,347:-10,-10,-10,0,-10,-8.24964 0|0:70.712:15:15:491:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 scaffold_56 1730468 . T A 256.957 . AB=0.407407;ABP=5.02092;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1755;DPB=1755;DPRA=1.41692;EPP=4.51363;EPPR=3.02154;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9206;NS=92;NUMALT=1;ODDS=9.19858;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=434;QR=63431;RO=1739;RPP=31.2394;RPPR=3727.27;RUN=1;SAF=5;SAP=4.51363;SAR=8;SRF=864;SRP=3.16139;SRR=875;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.0534:12:12:450:0:0:0,-3.61236,-10 0/0:61.0225:9:9:342:0:0:0,-2.70927,-10 0/0:99:23:23:840:0:0:0,-6.92369,-10 0/0:55.0019:7:7:247:0:0:0,-2.10721,-10 0/0:56.3994:16:15:545:1:16:0,-2.01236,-10 0/0:58.0122:8:8:298:0:0:0,-2.40824,-10 0/0:99:37:36:1296:1:16:0,-7.96991,-10 0/0:94.133:20:20:710:0:0:0,-6.0206,-10 0/0:99:25:25:903:0:0:0,-7.52575,-10 0/0:39.9504:2:2:53:0:0:0,-0.60206,-5.035 0/0:61.0225:9:9:341:0:0:0,-2.70927,-10 0/0:42.9607:3:3:91:0:0:0,-0.90309,-8.49333 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:99:22:22:763:0:0:0,-6.62266,-10 0/0:99:33:33:1218:0:0:0,-9.93399,-10 0/0:99:22:22:785:0:0:0,-6.62266,-10 0/0:99:23:23:820:0:0:0,-6.92369,-10 0/0:67.0431:11:11:416:0:0:0,-3.31133,-10 0/1:99:27:16:578:11:402:-10,0,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:79.0842:15:15:542:0:0:0,-4.51545,-10 0/0:99:30:30:1098:0:0:0,-9.0309,-10 0/0:58.0122:8:8:295:0:0:0,-2.40824,-10 0/0:99:22:22:807:0:0:0,-6.62266,-10 0/0:99:23:23:872:0:0:0,-6.92369,-10 0/0:99:24:24:875:0:0:0,-7.22472,-10 0/0:99:28:28:995:0:0:0,-8.42884,-10 0/0:73.0637:13:13:457:0:0:0,-3.91339,-10 0/0:99:22:22:816:0:0:0,-6.62266,-10 0/0:99:43:43:1590:0:0:0,-10,-10 0/0:48.9813:5:5:189:0:0:0,-1.50515,-10 0/0:45.971:4:4:151:0:0:0,-1.20412,-10 0/0:82.0944:16:16:578:0:0:0,-4.81648,-10 0/0:79.0842:15:15:519:0:0:0,-4.51545,-10 0/0:82.0944:16:16:563:0:0:0,-4.81648,-10 0/0:67.0431:11:11:418:0:0:0,-3.31133,-10 0/0:88.1145:18:18:671:0:0:0,-5.41854,-10 0/0:99:26:26:938:0:0:0,-7.82678,-10 0/0:79.0842:15:15:568:0:0:0,-4.51545,-10 0/0:85.1045:18:17:611:0:0:0,-5.11751,-10 0/0:99:25:25:882:0:0:0,-7.52575,-10 0/0:88.1145:18:18:663:0:0:0,-5.41854,-10 0/0:82.0944:17:16:594:0:0:0,-4.81648,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:79.0842:15:15:539:0:0:0,-4.51545,-10 0/0:67.0431:11:11:417:0:0:0,-3.31133,-10 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:88.1145:19:18:678:0:0:0,-5.41854,-10 0/0:76.0739:14:14:528:0:0:0,-4.21442,-10 0/0:99:52:52:1908:0:0:0,-10,-10 0/0:70.0534:12:12:445:0:0:0,-3.61236,-10 0/0:99:40:40:1469:0:0:0,-10,-10 0/0:88.1145:18:18:678:0:0:0,-5.41854,-10 0/0:42.9607:3:3:114:0:0:0,-0.90309,-10 0/0:99:43:43:1554:0:0:0,-10,-10 0/0:91.1241:19:19:692:0:0:0,-5.71957,-10 0/0:91.1241:19:19:686:0:0:0,-5.71957,-10 0/0:58.0122:8:8:300:0:0:0,-2.40824,-10 0/0:85.1045:17:17:644:0:0:0,-5.11751,-10 0/0:76.0739:14:14:501:0:0:0,-4.21442,-10 0/0:99:32:32:1183:0:0:0,-9.63296,-10 0/0:85.1045:17:17:597:0:0:0,-5.11751,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:91.1241:19:19:713:0:0:0,-5.71957,-10 0/0:73.0637:13:13:478:0:0:0,-3.91339,-10 0/0:99:23:23:838:0:0:0,-6.92369,-10 0/0:99:23:23:825:0:0:0,-6.92369,-10 0/0:64.0328:10:10:371:0:0:0,-3.0103,-10 0/0:99:27:27:981:0:0:0,-8.12781,-10 0/0:76.0739:14:14:520:0:0:0,-4.21442,-10 0/0:64.0328:10:10:352:0:0:0,-3.0103,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:99:22:22:802:0:0:0,-6.62266,-10 0/0:99:24:24:865:0:0:0,-7.22472,-10 0/0:99:26:26:928:0:0:0,-7.82678,-10 0/0:85.1045:17:17:611:0:0:0,-5.11751,-10 0/0:61.0225:9:9:316:0:0:0,-2.70927,-10 0/0:85.1045:17:17:618:0:0:0,-5.11751,-10 0/0:58.0122:8:8:273:0:0:0,-2.40824,-10 0/0:61.0225:9:9:325:0:0:0,-2.70927,-10 0/0:99:41:41:1499:0:0:0,-10,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:97.1457:21:21:791:0:0:0,-6.32163,-10 0/0:91.1241:19:19:655:0:0:0,-5.71957,-10 0/0:99:25:25:925:0:0:0,-7.52575,-10 0/0:45.971:4:4:149:0:0:0,-1.20412,-10 0/0:64.0328:10:10:376:0:0:0,-3.0103,-10 0/0:82.0944:16:16:605:0:0:0,-4.81648,-10 0/0:42.9607:3:3:114:0:0:0,-0.90309,-10 0/0:64.0328:10:10:380:0:0:0,-3.0103,-10 0/0:76.0739:14:14:509:0:0:0,-4.21442,-10 0/0:79.0842:15:15:549:0:0:0,-4.51545,-10 scaffold_56 1851128 . A AC 4109.63 . AB=0.495833;ABP=3.04649;AC=9;AF=0.048913;AN=184;AO=156;CIGAR=1M1I2M;DP=2605;DPB=2656.67;DPRA=1.44954;EPP=3.0103;EPPR=5.41672;GTI=0;LEN=1;MEANALT=1.25;MQM=59.8333;MQMR=59.9975;NS=92;NUMALT=1;ODDS=2.63402;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5500;QR=88510;RO=2440;RPP=341.76;RPPR=5301.4;RUN=1;SAF=78;SAP=3.0103;SAR=78;SRF=1246;SRP=5.41672;SRR=1194;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:45.1536:14:14:511:0:0:0,-4.21442,-10 0|0:42.1433:13:13:484:0:0:0,-3.91339,-10 0|0:78.2669:25:25:837:0:0:0,-7.52575,-10 0|0:51.1742:16:16:572:0:0:0,-4.81648,-10 0|0:60.2051:19:19:705:0:0:0,-5.71957,-10 0|0:33.1124:10:10:346:0:0:0,-3.0103,-10 0|0:99:53:53:1927:0:0:0,-10,-10 0|0:99:39:39:1429:0:0:0,-10,-10 0|0:57.1948:19:18:611:0:0:0,-5.41854,-10 0|0:30.1021:9:9:336:0:0:0,-2.70927,-10 0|0:12.0403:3:3:108:0:0:0,-0.90309,-10 0|0:39.133:12:12:433:0:0:0,-3.61236,-10 0|0:99:42:42:1515:0:0:0,-10,-10 0|0:99:65:64:2299:0:0:0,-10,-10 0|0:99:38:38:1366:0:0:0,-10,-10 0|0:81.2772:27:26:934:0:0:0,-7.82678,-10 0|0:78.2669:25:25:915:0:0:0,-7.52575,-10 0|0:39.133:12:12:447:0:0:0,-3.61236,-10 0|0:99:34:34:1251:0:0:0,-10,-10 0|0:99:43:43:1547:0:0:0,-10,-10 0|0:57.1948:18:18:653:0:0:0,-5.41854,-10 0|0:99:42:42:1562:0:0:0,-10,-10 0|0:57.1948:18:18:665:0:0:0,-5.41854,-10 0|0:78.2669:25:25:885:0:0:0,-7.52575,-10 0|0:99:42:42:1566:0:0:0,-10,-10 0|1:99:33:15:552:18:647:-10,0,-10 1|1:55.1907:25:0:0:24:839:-10,-7.22472,0 0|0:69.236:23:22:780:0:0:0,-6.62266,-10 0|0:87.2977:28:28:1032:0:0:0,-8.42884,-10 0|1:99:60:29:1042:31:1087:-10,0,-10 1|1:19.0671:12:0:0:12:394:-10,-3.61236,0 0|0:24.0815:7:7:245:0:0:0,-2.10721,-10 0|0:96.3237:31:31:1146:0:0:0,-9.33193,-10 0|0:45.1536:14:14:520:0:0:0,-4.21442,-10 0|0:75.2566:24:24:879:0:0:0,-7.22472,-10 0|0:33.1124:10:10:370:0:0:0,-3.0103,-10 0|0:21.0712:6:6:209:0:0:0,-1.80618,-10 0|0:99:44:43:1560:0:0:0,-10,-10 0|0:87.2977:28:28:1027:0:0:0,-8.42884,-10 0|0:66.2257:21:21:768:0:0:0,-6.32163,-10 0|1:99:54:29:1043:23:828:-10,0,-10 0|0:69.9471:39:38:1432:1:38:0,-6.34911,-10 0|0:87.2977:28:28:1020:0:0:0,-8.42884,-10 0|0:99:45:45:1673:0:0:0,-10,-10 0|1:99:33:18:661:15:548:-10,0,-10 0|0:93.318:30:30:1083:0:0:0,-9.0309,-10 0|0:99:56:56:2034:0:0:0,-10,-10 0|0:90.3079:29:29:1054:0:0:0,-8.72987,-10 0|0:51.1742:17:16:551:0:0:0,-4.81648,-10 0|1:99:60:28:953:32:1119:-10,0,-10 0|0:81.2772:26:26:942:0:0:0,-7.82678,-10 0|0:99:60:60:2180:0:0:0,-10,-10 0|0:39.133:12:12:425:0:0:0,-3.61236,-10 0|0:15.0506:4:4:139:0:0:0,-1.20412,-10 0|0:99:68:68:2472:0:0:0,-10,-10 0|0:87.2977:28:28:1009:0:0:0,-8.42884,-10 0|0:99:32:32:1143:0:0:0,-9.63296,-10 0|0:42.1433:13:13:464:0:0:0,-3.91339,-10 0|0:45.1536:14:14:503:0:0:0,-4.21442,-10 0|0:60.2051:19:19:710:0:0:0,-5.71957,-10 0|0:99:45:45:1645:0:0:0,-10,-10 0|0:75.2566:24:24:887:0:0:0,-7.22472,-10 0|0:99:69:69:2477:0:0:0,-10,-10 0|0:93.318:30:30:1064:0:0:0,-9.0309,-10 0|0:72.2463:23:23:825:0:0:0,-6.92369,-10 0|0:99:48:48:1759:0:0:0,-10,-10 0|0:57.1948:18:18:672:0:0:0,-5.41854,-10 0|0:42.1433:13:13:484:0:0:0,-3.91339,-10 0|0:99:52:52:1910:0:0:0,-10,-10 0|0:33.1124:10:10:356:0:0:0,-3.0103,-10 0|0:60.2051:19:19:685:0:0:0,-5.71957,-10 0|0:99:38:38:1392:0:0:0,-10,-10 0|0:99:44:44:1591:0:0:0,-10,-10 0|0:72.2463:23:23:843:0:0:0,-6.92369,-10 0|0:99:35:35:1235:0:0:0,-10,-10 0|0:69.236:22:22:803:0:0:0,-6.62266,-10 0|0:66.2257:21:21:779:0:0:0,-6.32163,-10 0|0:72.2463:23:23:850:0:0:0,-6.92369,-10 0|0:39.133:12:12:397:0:0:0,-3.61236,-10 0|0:60.2051:19:19:698:0:0:0,-5.71957,-10 0|0:99:43:43:1537:0:0:0,-10,-10 0|0:99:46:46:1649:0:0:0,-10,-10 0|0:99:43:43:1596:0:0:0,-10,-10 0|0:69.236:22:22:799:0:0:0,-6.62266,-10 0|0:99:36:36:1313:0:0:0,-10,-10 0|0:21.0712:6:6:215:0:0:0,-1.80618,-10 0|0:78.2669:25:25:907:0:0:0,-7.52575,-10 0|0:57.1948:18:18:637:0:0:0,-5.41854,-10 0|0:36.1227:11:11:409:0:0:0,-3.31133,-10 0|0:99:36:36:1314:0:0:0,-10,-10 0|0:45.1536:14:14:513:0:0:0,-4.21442,-10 0|0:66.2257:21:21:744:0:0:0,-6.32163,-10 scaffold_56 1855204 . G A 1508.44 . AB=0.464;ABP=4.41741;AC=4;AF=0.0217391;AN=184;AO=60;CIGAR=1X;DP=1669;DPB=1669;DPRA=1.5619;EPP=4.31318;EPPR=6.81071;GTI=0;LEN=1;MEANALT=1;MQM=59.65;MQMR=59.9259;NS=92;NUMALT=1;ODDS=2.61783;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2120;QR=58495;RO=1605;RPP=133.299;RPPR=3488.22;RUN=1;SAF=33;SAP=4.31318;SAR=27;SRF=829;SRP=6.81071;SRR=776;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:30.1606:9:9:338:0:0:0,-2.70927,-10 0/0:30.1606:9:9:325:0:0:0,-2.70927,-10 0/0:48.2224:15:15:569:0:0:0,-4.51545,-10 0/0:51.2327:16:16:558:0:0:0,-4.81648,-10 0/0:57.2533:18:18:641:0:0:0,-5.41854,-10 0/0:30.1606:9:9:342:0:0:0,-2.70927,-10 0/0:75.315:24:24:854:0:0:0,-7.22472,-10 0/0:84.3457:27:27:1001:0:0:0,-8.12781,-10 0/0:33.1709:10:10:379:0:0:0,-3.0103,-10 0/0:21.1297:6:6:211:0:0:0,-1.80618,-10 0/0:15.1091:4:4:151:0:0:0,-1.20412,-10 0/0:39.1915:12:12:444:0:0:0,-3.61236,-10 0/0:96.3871:31:31:1168:0:0:0,-9.33193,-10 0/0:72.3047:23:23:811:0:0:0,-6.92369,-10 0/0:96.3871:31:31:1110:0:0:0,-9.33193,-10 0/0:75.315:25:24:883:0:0:0,-7.22472,-10 0/0:63.2739:20:20:741:0:0:0,-6.0206,-10 0/0:27.1503:8:8:297:0:0:0,-2.40824,-10 0/0:60.2636:19:19:703:0:0:0,-5.71957,-10 0/1:99:34:19:712:15:515:-10,0,-10 0/0:36.1812:11:11:399:0:0:0,-3.31133,-10 0/1:99:38:21:790:17:618:-10,0,-10 0/0:48.2224:15:15:545:0:0:0,-4.51545,-10 0/0:60.2636:19:19:695:0:0:0,-5.71957,-10 0/0:66.2842:21:21:782:0:0:0,-6.32163,-10 0/0:69.2945:22:22:784:0:0:0,-6.62266,-10 0/0:66.2842:21:21:766:0:0:0,-6.32163,-10 0/0:69.2945:22:22:832:0:0:0,-6.62266,-10 0/0:69.2945:22:22:757:0:0:0,-6.62266,-10 0/0:99:34:34:1258:0:0:0,-10,-10 0/0:24.14:8:7:262:0:0:0,-2.10721,-10 0/0:45.2121:14:14:502:0:0:0,-4.21442,-10 0/0:42.2018:13:13:464:0:0:0,-3.91339,-10 0/0:33.1709:10:10:349:0:0:0,-3.0103,-10 0/0:45.2121:15:14:486:0:0:0,-4.21442,-10 0/0:18.1194:5:5:188:0:0:0,-1.50515,-10 0/0:21.1297:6:6:226:0:0:0,-1.80618,-10 0/1:99:21:13:479:8:277:-10,0,-10 0/0:48.2224:15:15:549:0:0:0,-4.51545,-10 0/0:42.2018:13:13:481:0:0:0,-3.91339,-10 0/0:63.2739:20:20:749:0:0:0,-6.0206,-10 0/0:84.3457:27:27:973:0:0:0,-8.12781,-10 0/0:87.3557:28:28:1016:0:0:0,-8.42884,-10 0/0:87.3557:28:28:1048:0:0:0,-8.42884,-10 0/0:57.2533:18:18:646:0:0:0,-5.41854,-10 0/0:54.243:17:17:608:0:0:0,-5.11751,-10 0/0:93.3747:30:30:1062:0:0:0,-9.0309,-10 0/0:93.3747:30:30:1058:0:0:0,-9.0309,-10 0/0:45.2121:14:14:493:0:0:0,-4.21442,-10 0/0:99:33:33:1188:0:0:0,-9.93399,-10 0/0:36.1812:11:11:417:0:0:0,-3.31133,-10 0/0:99:39:39:1413:0:0:0,-10,-10 0/0:45.2121:14:14:520:0:0:0,-4.21442,-10 0/0:21.1297:6:6:221:0:0:0,-1.80618,-10 0/0:87.3557:28:28:987:0:0:0,-8.42884,-10 0/0:45.2121:14:14:525:0:0:0,-4.21442,-10 0/0:57.2533:18:18:640:0:0:0,-5.41854,-10 0/0:24.14:7:7:264:0:0:0,-2.10721,-10 0/0:87.3557:28:28:1009:0:0:0,-8.42884,-10 0/0:33.1709:10:10:373:0:0:0,-3.0103,-10 0/0:99:37:37:1351:0:0:0,-10,-10 0/0:45.2121:14:14:521:0:0:0,-4.21442,-10 0/1:99:32:14:474:18:680:-10,0,-10 0/0:69.2945:22:22:792:0:0:0,-6.62266,-10 0/0:48.2224:15:15:549:0:0:0,-4.51545,-10 0/0:87.3557:28:28:1041:0:0:0,-8.42884,-10 0/0:45.2121:14:14:529:0:0:0,-4.21442,-10 0/0:30.1606:9:9:320:0:0:0,-2.70927,-10 0/0:75.315:24:24:883:0:0:0,-7.22472,-10 0/0:48.2224:15:15:562:0:0:0,-4.51545,-10 0/0:45.2121:14:14:502:0:0:0,-4.21442,-10 0/0:54.243:17:17:626:0:0:0,-5.11751,-10 0/0:63.2739:20:20:717:0:0:0,-6.0206,-10 0/0:42.2018:13:13:470:0:0:0,-3.91339,-10 0/0:69.2945:22:22:830:0:0:0,-6.62266,-10 0/0:33.1709:10:10:379:0:0:0,-3.0103,-10 0/0:48.2224:15:15:544:0:0:0,-4.51545,-10 0/0:45.2121:14:14:524:0:0:0,-4.21442,-10 0/0:12.0988:3:3:113:0:0:0,-0.90309,-10 0/0:27.1503:8:8:301:0:0:0,-2.40824,-10 0/0:90.3655:30:29:1045:0:0:0,-8.72987,-10 0/0:48.2224:15:15:530:0:0:0,-4.51545,-10 0/0:41.1308:21:20:719:1:15:0,-3.49941,-10 0/0:63.2739:20:20:750:0:0:0,-6.0206,-10 0/0:32.7693:18:17:624:1:15:0,-2.66327,-10 0/0:42.2018:13:13:478:0:0:0,-3.91339,-10 0/0:66.2842:21:21:781:0:0:0,-6.32163,-10 0/0:33.1709:10:10:349:0:0:0,-3.0103,-10 0/0:24.14:7:7:265:0:0:0,-2.10721,-10 0/0:66.2842:21:21:734:0:0:0,-6.32163,-10 0/0:60.2636:19:19:697:0:0:0,-5.71957,-10 0/0:42.2018:13:13:453:0:0:0,-3.91339,-10 scaffold_56 1855207 . T A 2329.71 . AB=0.734375;ABP=33.5466;AC=8;AF=0.0434783;AN=184;AO=91;CIGAR=1X;DP=1669;DPB=1669;DPRA=1.12873;EPP=4.94315;EPPR=9.38142;GTI=3;LEN=1;MEANALT=1;MQM=59.9011;MQMR=59.9346;NS=92;NUMALT=1;ODDS=2.20018;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3317;QR=57577;RO=1576;RPP=200.614;RPPR=3425.25;RUN=1;SAF=41;SAP=4.94315;SAR=50;SRF=822;SRP=9.38142;SRR=754;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.135877:9:0:0:9:337:-10,-2.70927,0 0/0:29.9612:9:9:319:0:0:0,-2.70927,-10 0/0:48.023:15:15:563:0:0:0,-4.51545,-10 0/0:51.0333:16:16:553:0:0:0,-4.81648,-10 0/0:57.0539:18:18:637:0:0:0,-5.41854,-10 0/1:0.135877:9:0:0:9:307:-10,-2.70927,0 0/0:75.1157:24:24:874:0:0:0,-7.22472,-10 0/0:84.1466:27:27:975:0:0:0,-8.12781,-10 0/0:32.9715:10:10:377:0:0:0,-3.0103,-10 0/0:20.9303:6:6:204:0:0:0,-1.80618,-10 0/0:14.9097:4:4:152:0:0:0,-1.20412,-10 0/0:38.9921:12:12:446:0:0:0,-3.61236,-10 0/0:96.1878:31:31:1147:0:0:0,-9.33193,-10 0/0:72.1054:23:23:811:0:0:0,-6.92369,-10 0/0:96.1878:31:31:1152:0:0:0,-9.33193,-10 0/0:78.126:25:25:881:0:0:0,-7.52575,-10 0/0:63.0745:20:20:745:0:0:0,-6.0206,-10 0/1:0.0674073:8:0:0:8:299:-10,-2.40824,0 0/0:60.0642:19:19:678:0:0:0,-5.71957,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:35.9818:11:11:415:0:0:0,-3.31133,-10 0/1:99:38:17:642:21:793:-10,0,-10 0/0:48.023:15:15:563:0:0:0,-4.51545,-10 0/0:60.0642:19:19:695:0:0:0,-5.71957,-10 0/0:66.0848:21:21:775:0:0:0,-6.32163,-10 0/0:69.0951:22:22:792:0:0:0,-6.62266,-10 0/0:66.0848:21:21:781:0:0:0,-6.32163,-10 0/0:69.0951:22:22:830:0:0:0,-6.62266,-10 0/0:69.0951:22:22:776:0:0:0,-6.62266,-10 0/0:99:34:34:1232:0:0:0,-10,-10 0/0:26.9509:8:8:294:0:0:0,-2.40824,-10 0/0:45.0127:14:14:524:0:0:0,-4.21442,-10 0/0:42.0024:13:13:476:0:0:0,-3.91339,-10 0/0:32.9715:10:10:370:0:0:0,-3.0103,-10 0/0:48.023:15:15:526:0:0:0,-4.51545,-10 0/0:17.92:5:5:190:0:0:0,-1.50515,-10 0/0:20.9303:6:6:223:0:0:0,-1.80618,-10 0/0:66.0848:21:21:781:0:0:0,-6.32163,-10 0/0:48.023:15:15:559:0:0:0,-4.51545,-10 0/0:42.0024:13:13:463:0:0:0,-3.91339,-10 0/0:63.0745:20:20:755:0:0:0,-6.0206,-10 0/0:84.1466:27:27:986:0:0:0,-8.12781,-10 0/0:87.1569:28:28:1034:0:0:0,-8.42884,-10 0/0:61.8668:28:27:996:1:15:0,-5.48168,-10 0/0:57.0539:18:18:660:0:0:0,-5.41854,-10 0/0:54.0436:17:17:630:0:0:0,-5.11751,-10 0/0:93.1775:30:30:1081:0:0:0,-9.0309,-10 0/0:93.1775:30:30:1067:0:0:0,-9.0309,-10 0/0:45.0127:14:14:516:0:0:0,-4.21442,-10 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:35.9818:11:11:415:0:0:0,-3.31133,-10 0/0:99:39:39:1387:0:0:0,-10,-10 0/0:42.0024:14:13:460:0:0:0,-3.91339,-10 0/0:20.9303:6:6:228:0:0:0,-1.80618,-10 0/0:87.1569:28:28:1018:0:0:0,-8.42884,-10 0/0:45.0127:14:14:519:0:0:0,-4.21442,-10 0/0:57.0539:18:18:602:0:0:0,-5.41854,-10 0/0:23.9406:7:7:262:0:0:0,-2.10721,-10 1/1:53.3035:28:0:0:28:1023:-10,-8.42884,0 0/0:32.9715:10:10:354:0:0:0,-3.0103,-10 0/0:99:37:37:1375:0:0:0,-10,-10 0/0:45.0127:14:14:509:0:0:0,-4.21442,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:69.0951:22:22:764:0:0:0,-6.62266,-10 0/0:48.023:15:15:502:0:0:0,-4.51545,-10 0/0:61.8668:28:27:1002:1:15:0,-5.48168,-10 0/0:45.0127:14:14:523:0:0:0,-4.21442,-10 0/0:29.9612:9:9:335:0:0:0,-2.70927,-10 0/0:75.1157:24:24:888:0:0:0,-7.22472,-10 0/0:48.023:15:15:564:0:0:0,-4.51545,-10 0/0:45.0127:14:14:504:0:0:0,-4.21442,-10 0/0:54.0436:17:17:611:0:0:0,-5.11751,-10 0/0:63.0745:20:20:716:0:0:0,-6.0206,-10 0/0:42.0024:13:13:487:0:0:0,-3.91339,-10 0/0:69.0951:22:22:791:0:0:0,-6.62266,-10 0/0:32.9715:10:10:374:0:0:0,-3.0103,-10 0/0:48.023:15:15:559:0:0:0,-4.51545,-10 1/1:11.1593:14:0:0:14:528:-10,-4.21442,0 0/0:11.8994:3:3:111:0:0:0,-0.90309,-10 0/0:26.9509:8:8:303:0:0:0,-2.40824,-10 0/0:93.1775:30:30:1112:0:0:0,-9.0309,-10 0/0:48.023:15:15:538:0:0:0,-4.51545,-10 0/0:66.0848:21:21:779:0:0:0,-6.32163,-10 0/0:63.0745:20:20:739:0:0:0,-6.0206,-10 0/0:57.0539:18:18:659:0:0:0,-5.41854,-10 0/0:42.0024:13:13:478:0:0:0,-3.91339,-10 0/0:66.0848:21:21:796:0:0:0,-6.32163,-10 0/0:32.9715:10:10:364:0:0:0,-3.0103,-10 0/0:23.9406:7:7:262:0:0:0,-2.10721,-10 0/0:63.0745:21:20:734:0:0:0,-6.0206,-10 0/0:60.0642:19:19:698:0:0:0,-5.71957,-10 0/0:42.0024:13:13:458:0:0:0,-3.91339,-10 scaffold_56 1855682 . C T 4069.86 . AB=0.506849;ABP=3.09954;AC=16;AF=0.0869565;AN=184;AO=155;CIGAR=1X;DP=1518;DPB=1518;DPRA=1.20195;EPP=3.36054;EPPR=3.02464;GTI=1;LEN=1;MEANALT=1;MQM=59.9226;MQMR=59.9956;NS=92;NUMALT=1;ODDS=2.33725;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5546;QR=50219;RO=1363;RPP=322.441;RPPR=2774.72;RUN=1;SAF=82;SAP=4.14507;SAR=73;SRF=703;SRP=5.95605;SRR=660;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.0336:15:15:543:0:0:0,-4.51545,-10 0/0:26.9615:8:8:301:0:0:0,-2.40824,-10 0/0:72.116:23:23:834:0:0:0,-6.92369,-10 0/0:26.9615:8:8:282:0:0:0,-2.40824,-10 0/0:57.0645:18:18:683:0:0:0,-5.41854,-10 0/0:20.9409:6:6:227:0:0:0,-1.80618,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:78.1366:25:25:913:0:0:0,-7.52575,-10 0/0:35.9924:11:11:414:0:0:0,-3.31133,-10 0/0:17.9306:5:5:190:0:0:0,-1.50515,-10 0/0:23.9512:7:7:265:0:0:0,-2.10721,-10 0/0:11.91:3:3:108:0:0:0,-0.90309,-10 0/0:75.1263:24:24:855:0:0:0,-7.22472,-10 0/0:81.1469:26:26:957:0:0:0,-7.82678,-10 0/0:35.9924:11:11:415:0:0:0,-3.31133,-10 0/0:78.1366:25:25:932:0:0:0,-7.52575,-10 0/0:69.1057:22:22:831:0:0:0,-6.62266,-10 0/0:29.9718:9:9:331:0:0:0,-2.70927,-10 0/0:35.9924:11:11:413:0:0:0,-3.31133,-10 0/1:99:34:14:504:20:719:-10,0,-10 0/0:57.0645:18:18:676:0:0:0,-5.41854,-10 0/1:99:20:12:453:8:302:-10,0,-10 0/0:39.0027:12:12:426:0:0:0,-3.61236,-10 0/1:99:21:12:443:9:336:-10,0,-10 0/0:48.0336:15:15:568:0:0:0,-4.51545,-10 0/0:63.0851:20:20:738:0:0:0,-6.0206,-10 0/0:63.0851:20:20:731:0:0:0,-6.0206,-10 0/0:15.9048:12:11:413:1:16:0,-0.933179,-10 0/0:57.0645:18:18:660:0:0:0,-5.41854,-10 0/0:99:37:37:1346:0:0:0,-10,-10 0/0:29.9718:9:9:340:0:0:0,-2.70927,-10 0/0:39.0027:12:12:434:0:0:0,-3.61236,-10 0/0:35.9924:11:11:395:0:0:0,-3.31133,-10 0/0:20.9409:6:6:221:0:0:0,-1.80618,-10 0/0:35.9924:11:11:413:0:0:0,-3.31133,-10 0/0:14.9203:4:4:128:0:0:0,-1.20412,-10 0/0:35.9924:11:11:407:0:0:0,-3.31133,-10 0/1:99:28:17:638:11:362:-10,0,-10 0/0:29.9718:9:9:318:0:0:0,-2.70927,-10 0/0:23.9666:15:14:508:1:16:0,-1.73936,-10 0/0:69.1057:22:22:822:0:0:0,-6.62266,-10 0/0:72.116:23:23:856:0:0:0,-6.92369,-10 0/0:42.013:13:13:457:0:0:0,-3.91339,-10 0/0:90.1775:29:29:1062:0:0:0,-8.72987,-10 0/0:69.1057:22:22:793:0:0:0,-6.62266,-10 0/0:48.0336:15:15:536:0:0:0,-4.51545,-10 0/0:81.1469:26:26:963:0:0:0,-7.82678,-10 0/1:99:20:12:455:8:297:-10,0,-10 1/1:18.3494:12:0:0:12:447:-10,-3.61236,0 0/0:84.1571:27:27:960:0:0:0,-8.12781,-10 0/0:45.0233:14:14:524:0:0:0,-4.21442,-10 0/0:78.1366:25:25:900:0:0:0,-7.52575,-10 0/0:45.0233:14:14:507:0:0:0,-4.21442,-10 0/0:14.9203:4:4:152:0:0:0,-1.20412,-10 0/0:99:36:36:1342:0:0:0,-10,-10 0/0:54.0542:17:17:640:0:0:0,-5.11751,-10 0/1:99:15:5:190:10:364:-10,0,-10 0/0:23.9512:7:7:262:0:0:0,-2.10721,-10 0/0:60.0748:19:19:716:0:0:0,-5.71957,-10 0/0:32.9821:10:10:366:0:0:0,-3.0103,-10 0/0:75.1263:24:24:884:0:0:0,-7.22472,-10 1/1:27.3803:15:0:0:15:509:-10,-4.51545,0 0/1:99:37:16:600:21:748:-10,0,-10 0/0:35.9924:11:11:388:0:0:0,-3.31133,-10 0/0:20.9409:6:6:228:0:0:0,-1.80618,-10 0/0:87.1669:28:28:1053:0:0:0,-8.42884,-10 0/0:35.9924:11:11:410:0:0:0,-3.31133,-10 0/0:39.0027:12:12:455:0:0:0,-3.61236,-10 0/1:99:20:6:225:14:498:-10,0,-10 1/1:27.3803:15:0:0:15:554:-10,-4.51545,0 0/0:48.0336:15:15:542:0:0:0,-4.51545,-10 0/0:84.1571:27:27:967:0:0:0,-8.12781,-10 0/0:57.0645:18:18:674:0:0:0,-5.41854,-10 0/0:39.0027:12:12:453:0:0:0,-3.61236,-10 0/0:72.116:23:23:855:0:0:0,-6.92369,-10 0/0:14.9203:4:4:149:0:0:0,-1.20412,-10 0/0:26.9615:8:8:297:0:0:0,-2.40824,-10 0/0:32.9821:10:10:365:0:0:0,-3.0103,-10 0/0:17.9306:5:5:190:0:0:0,-1.50515,-10 0/0:26.9615:8:8:293:0:0:0,-2.40824,-10 0/0:99:37:37:1394:0:0:0,-10,-10 0/0:78.1366:25:25:916:0:0:0,-7.52575,-10 0/0:60.0748:19:19:712:0:0:0,-5.71957,-10 0/0:51.0439:16:16:588:0:0:0,-4.81648,-10 0/1:99:21:14:508:7:264:-10,0,-10 0/1:0.193035:3:0:0:3:114:-10,-0.90309,0 0/0:54.0542:17:17:628:0:0:0,-5.11751,-10 0/0:35.9924:11:11:397:0:0:0,-3.31133,-10 0/0:29.9718:9:9:342:0:0:0,-2.70927,-10 0/0:63.0851:20:20:713:0:0:0,-6.0206,-10 0/0:48.0336:15:15:556:0:0:0,-4.51545,-10 0/0:39.0027:12:12:436:0:0:0,-3.61236,-10 scaffold_56 1855699 . C T 1051.49 . AB=0.630769;ABP=12.665;AC=4;AF=0.0217391;AN=184;AO=43;CIGAR=1X;DP=1515;DPB=1515;DPRA=1.07831;EPP=3.46479;EPPR=8.15591;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9912;NS=92;NUMALT=1;ODDS=5.3021;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1556;QR=53580;RO=1469;RPP=96.3836;RPPR=3149.62;RUN=1;SAF=23;SAP=3.46479;SAR=20;SRF=759;SRP=6.55945;SRR=710;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.7699:15:15:551:0:0:0,-4.51545,-10 0/0:39.6978:8:8:280:0:0:0,-2.40824,-10 0/0:59.7477:23:22:798:1:15:0,-4.06196,-10 0/0:39.6978:8:8:280:0:0:0,-2.40824,-10 0/1:99:18:11:417:7:266:-10,0,-10 0/0:33.6772:6:6:228:0:0:0,-1.80618,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/1:99:25:7:251:18:679:-10,0,-10 0/1:0.0212259:11:0:0:11:391:-10,-3.31133,0 0/0:30.6669:5:5:189:0:0:0,-1.50515,-10 0/0:36.6875:7:7:262:0:0:0,-2.10721,-10 0/0:24.6463:3:3:101:0:0:0,-0.90309,-9.42667 0/0:87.8621:24:24:872:0:0:0,-7.22472,-10 0/0:90.8719:25:25:878:0:0:0,-7.52575,-10 0/1:99:11:6:224:5:190:-10,0,-10 0/0:90.8719:25:25:926:0:0:0,-7.52575,-10 0/0:78.8317:22:21:777:0:0:0,-6.32163,-10 0/0:42.7081:9:9:324:0:0:0,-2.70927,-10 0/0:48.7287:11:11:409:0:0:0,-3.31133,-10 0/0:99:34:34:1176:0:0:0,-10,-10 0/0:69.8008:18:18:669:0:0:0,-5.41854,-10 0/0:75.8214:20:20:745:0:0:0,-6.0206,-10 0/0:51.739:12:12:429:0:0:0,-3.61236,-10 0/0:78.8317:21:21:779:0:0:0,-6.32163,-10 0/0:60.7699:15:15:559:0:0:0,-4.51545,-10 0/0:75.8214:20:20:736:0:0:0,-6.0206,-10 0/0:75.8214:20:20:750:0:0:0,-6.0206,-10 0/0:51.739:12:12:432:0:0:0,-3.61236,-10 0/0:45.7608:18:17:642:1:15:0,-2.66327,-10 0/0:99:37:37:1295:0:0:0,-10,-10 0/0:42.7081:9:9:318:0:0:0,-2.70927,-10 0/0:51.739:12:12:432:0:0:0,-3.61236,-10 0/0:48.7287:11:11:388:0:0:0,-3.31133,-10 0/0:33.6772:6:6:225:0:0:0,-1.80618,-10 0/0:48.7287:11:11:418:0:0:0,-3.31133,-10 0/0:27.6566:4:4:137:0:0:0,-1.20412,-10 0/0:48.7287:11:11:415:0:0:0,-3.31133,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:42.7081:9:9:335:0:0:0,-2.70927,-10 0/0:60.7699:15:15:527:0:0:0,-4.51545,-10 0/0:81.8421:22:22:824:0:0:0,-6.62266,-10 0/0:81.8421:22:22:800:0:0:0,-6.62266,-10 0/0:54.7493:13:13:469:0:0:0,-3.91339,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:81.8421:22:22:822:0:0:0,-6.62266,-10 0/0:60.7699:15:15:519:0:0:0,-4.51545,-10 0/0:90.8719:25:25:920:0:0:0,-7.52575,-10 0/0:75.8214:20:20:746:0:0:0,-6.0206,-10 0/0:51.739:12:12:452:0:0:0,-3.61236,-10 0/0:93.8813:27:26:880:0:0:0,-7.82678,-10 0/0:57.7596:14:14:501:0:0:0,-4.21442,-10 0/0:90.8719:25:25:903:0:0:0,-7.52575,-10 0/0:57.7596:14:14:487:0:0:0,-4.21442,-10 0/0:27.6566:4:4:148:0:0:0,-1.20412,-10 0/0:99:36:36:1311:0:0:0,-10,-10 0/0:66.7905:17:17:610:0:0:0,-5.11751,-10 0/0:60.7699:15:15:555:0:0:0,-4.51545,-10 0/0:36.6875:7:7:265:0:0:0,-2.10721,-10 0/0:72.8111:19:19:718:0:0:0,-5.71957,-10 0/0:45.7184:10:10:349:0:0:0,-3.0103,-10 0/0:87.8621:24:24:909:0:0:0,-7.22472,-10 0/0:60.7699:15:15:525:0:0:0,-4.51545,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:48.7287:11:11:405:0:0:0,-3.31133,-10 0/0:33.6772:6:6:228:0:0:0,-1.80618,-10 0/0:99:28:28:1019:0:0:0,-8.42884,-10 0/0:48.7287:11:11:394:0:0:0,-3.31133,-10 0/0:51.739:12:12:454:0:0:0,-3.61236,-10 0/0:75.8214:20:20:734:0:0:0,-6.0206,-10 0/0:60.7699:15:15:550:0:0:0,-4.51545,-10 0/0:60.7699:15:15:566:0:0:0,-4.51545,-10 0/0:96.8896:27:27:991:0:0:0,-8.12781,-10 0/0:69.8008:18:18:658:0:0:0,-5.41854,-10 0/0:51.739:12:12:451:0:0:0,-3.61236,-10 0/0:84.8524:23:23:828:0:0:0,-6.92369,-10 0/0:27.6566:4:4:149:0:0:0,-1.20412,-10 0/0:39.6978:8:8:300:0:0:0,-2.40824,-10 0/0:45.7184:10:10:376:0:0:0,-3.0103,-10 0/0:30.6669:5:5:185:0:0:0,-1.50515,-10 0/0:39.6978:8:8:288:0:0:0,-2.40824,-10 0/0:99:37:37:1358:0:0:0,-10,-10 0/0:90.8719:25:25:909:0:0:0,-7.52575,-10 0/0:72.8111:19:19:695:0:0:0,-5.71957,-10 0/0:60.7699:16:15:560:0:0:0,-4.51545,-10 0/0:78.8317:21:21:798:0:0:0,-6.32163,-10 0/0:24.6463:3:3:114:0:0:0,-0.90309,-10 0/0:66.7905:17:17:593:0:0:0,-5.11751,-10 0/0:48.7287:11:11:392:0:0:0,-3.31133,-10 0/0:42.7081:9:9:318:0:0:0,-2.70927,-10 0/0:75.8214:20:20:698:0:0:0,-6.0206,-10 0/0:60.7699:15:15:557:0:0:0,-4.51545,-10 0/0:51.739:12:12:454:0:0:0,-3.61236,-10 scaffold_56 1881494 . C T 729.091 . AB=0.528302;ABP=3.37904;AC=1;AF=0.00561798;AN=178;AO=31;CIGAR=1X;DP=2589;DPB=2589;DPRA=1.2841;EPP=6.44263;EPPR=3.04086;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9812;NS=89;NUMALT=1;ODDS=3.13595;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1115;QR=93253;RO=2558;RPP=70.3259;RPPR=5557.64;RUN=1;SAF=19;SAP=6.44263;SAR=12;SRF=1282;SRP=3.04086;SRR=1276;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.7593:23:23:855:0:0:0,-6.92369,-10 0/0:67.7387:21:21:747:0:0:0,-6.32163,-10 0/0:52.6872:16:16:594:0:0:0,-4.81648,-10 0/0:64.7284:20:20:756:0:0:0,-6.0206,-10 0/0:64.7284:20:20:760:0:0:0,-6.0206,-10 0/0:46.6666:14:14:510:0:0:0,-4.21442,-10 0/0:99:69:69:2551:0:0:0,-10,-10 0/0:99:36:36:1298:0:0:0,-10,-10 0/0:73.7593:23:23:842:0:0:0,-6.92369,-10 0/0:16.5636:4:4:152:0:0:0,-1.20412,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:99:32:32:1135:0:0:0,-9.63296,-10 0/0:99:46:46:1690:0:0:0,-10,-10 0/0:99:49:49:1742:0:0:0,-10,-10 0/0:99:38:38:1362:0:0:0,-10,-10 0/0:99:41:41:1492:0:0:0,-10,-10 0/0:52.6872:16:16:576:0:0:0,-4.81648,-10 0/0:99:36:36:1325:0:0:0,-10,-10 0/0:99:82:82:2957:0:0:0,-10,-10 0/0:61.7181:19:19:705:0:0:0,-5.71957,-10 0/0:99:52:52:1897:0:0:0,-10,-10 0/0:55.6975:17:17:584:0:0:0,-5.11751,-10 0/0:61.7181:19:19:702:0:0:0,-5.71957,-10 0/0:99:36:36:1350:0:0:0,-10,-10 0/0:99:42:42:1536:0:0:0,-10,-10 0/0:76.7696:24:24:879:0:0:0,-7.22472,-10 0/0:67.7387:21:21:708:0:0:0,-6.32163,-10 0/0:94.8324:30:30:1075:0:0:0,-9.0309,-10 0/0:99:48:48:1755:0:0:0,-10,-10 0/0:58.7078:18:18:655:0:0:0,-5.41854,-10 0/0:28.6048:8:8:302:0:0:0,-2.40824,-10 0/0:91.8201:29:29:1056:0:0:0,-8.72987,-10 0/0:13.9733:10:9:336:1:16:0,-0.4103,-10 0/0:85.8003:27:27:1009:0:0:0,-8.12781,-10 0/0:34.6254:10:10:345:0:0:0,-3.0103,-10 0/0:28.6048:8:8:256:0:0:0,-2.40824,-10 0/0:99:58:58:2127:0:0:0,-10,-10 0/0:70.749:22:22:819:0:0:0,-6.62266,-10 0/0:52.6872:16:16:600:0:0:0,-4.81648,-10 0/0:99:42:42:1507:0:0:0,-10,-10 0/0:99:33:33:1207:0:0:0,-9.93399,-10 0/0:76.7696:24:24:889:0:0:0,-7.22472,-10 0/0:99:58:58:2100:0:0:0,-10,-10 0/0:99:34:34:1208:0:0:0,-10,-10 0/0:73.7593:23:23:836:0:0:0,-6.92369,-10 0/0:99:67:67:2435:0:0:0,-10,-10 0/0:99:33:33:1229:0:0:0,-9.93399,-10 0/0:67.7387:21:21:787:0:0:0,-6.32163,-10 0/0:99:40:40:1458:0:0:0,-10,-10 0/0:67.7387:21:21:740:0:0:0,-6.32163,-10 0/0:99:53:53:1925:0:0:0,-10,-10 0/0:70.749:22:22:810:0:0:0,-6.62266,-10 0/0:31.6151:9:9:312:0:0:0,-2.70927,-10 0/0:48.102:48:46:1655:2:76:0,-4.17713,-10 0/0:55.6975:17:17:630:0:0:0,-5.11751,-10 0/0:94.8324:30:30:1084:0:0:0,-9.0309,-10 0/0:52.6872:16:16:585:0:0:0,-4.81648,-10 0/0:85.8003:27:27:1009:0:0:0,-8.12781,-10 0/0:55.6975:17:17:627:0:0:0,-5.11751,-10 0/0:99:56:56:2043:0:0:0,-10,-10 0/0:67.7387:21:21:718:0:0:0,-6.32163,-10 0/1:99:53:25:910:28:1023:-10,0,-10 0/0:85.8003:27:27:1002:0:0:0,-8.12781,-10 0/0:52.6872:16:16:561:0:0:0,-4.81648,-10 0/0:99:58:58:2156:0:0:0,-10,-10 0/0:97.8437:31:31:1154:0:0:0,-9.33193,-10 0/0:34.6254:10:10:377:0:0:0,-3.0103,-10 0/0:99:46:46:1624:0:0:0,-10,-10 0/0:34.6254:10:10:376:0:0:0,-3.0103,-10 0/0:88.8103:28:28:1046:0:0:0,-8.42884,-10 0/0:99:32:32:1108:0:0:0,-9.63296,-10 0/0:99:37:37:1384:0:0:0,-10,-10 0/0:40.646:12:12:453:0:0:0,-3.61236,-10 0/0:99:37:37:1392:0:0:0,-10,-10 0/0:88.8103:28:28:1047:0:0:0,-8.42884,-10 .:.:.:.:.:.:.:. 0/0:70.749:22:22:806:0:0:0,-6.62266,-10 0/0:34.6254:10:10:372:0:0:0,-3.0103,-10 0/0:40.646:12:12:443:0:0:0,-3.61236,-10 0/0:99:45:45:1655:0:0:0,-10,-10 0/0:99:42:42:1547:0:0:0,-10,-10 0/0:99:38:38:1318:0:0:0,-10,-10 0/0:46.6666:14:14:527:0:0:0,-4.21442,-10 0/0:97.8437:31:31:1118:0:0:0,-9.33193,-10 0/0:19.5739:5:5:190:0:0:0,-1.50515,-10 0/0:61.7181:19:19:673:0:0:0,-5.71957,-10 0/0:85.8003:27:27:970:0:0:0,-8.12781,-10 0/0:43.6563:13:13:491:0:0:0,-3.91339,-10 0/0:88.8103:28:28:1033:0:0:0,-8.42884,-10 0/0:67.7387:21:21:760:0:0:0,-6.32163,-10 0/0:79.7798:25:25:926:0:0:0,-7.52575,-10 scaffold_56 1977643 . T C 3634.16 . AB=0.471264;ABP=3.63429;AC=12;AF=0.0659341;AN=182;AO=136;CIGAR=1X;DP=1660;DPB=1660;DPRA=1.23393;EPP=3.07417;EPPR=3.02313;GTI=0;LEN=1;MEANALT=1;MQM=59.9853;MQMR=59.979;NS=91;NUMALT=1;ODDS=0.41742;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4983;QR=55580;RO=1523;RPP=298.331;RPPR=3310.16;RUN=1;SAF=67;SAP=3.07417;SAR=69;SRF=760;SRP=3.02313;SRR=763;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.4896:16:16:582:0:0:0,-4.81648,-10 0/0:21.3969:7:7:256:0:0:0,-2.10721,-10 0/0:51.4999:17:17:630:0:0:0,-5.11751,-10 0/0:42.469:14:14:528:0:0:0,-4.21442,-10 0/0:33.4381:11:11:387:0:0:0,-3.31133,-10 .:.:.:.:.:.:.:. 0/0:99:40:40:1467:0:0:0,-10,-10 0/0:33.4381:11:11:418:0:0:0,-3.31133,-10 0/0:39.4587:13:13:438:0:0:0,-3.91339,-10 0/0:18.3866:6:6:228:0:0:0,-1.80618,-10 0/0:18.3866:6:6:228:0:0:0,-1.80618,-10 0/0:18.3866:6:6:224:0:0:0,-1.80618,-10 0/0:81.6029:27:27:962:0:0:0,-8.12781,-10 0/0:81.6029:27:27:1016:0:0:0,-8.12781,-10 0/0:69.5617:23:23:871:0:0:0,-6.92369,-10 0/0:57.5205:19:19:718:0:0:0,-5.71957,-10 0/0:66.5514:22:22:826:0:0:0,-6.62266,-10 0/0:18.3866:6:6:222:0:0:0,-1.80618,-10 0/0:90.6332:30:30:1060:0:0:0,-9.0309,-10 0/0:42.469:14:14:524:0:0:0,-4.21442,-10 0/0:45.4793:15:15:568:0:0:0,-4.51545,-10 0/0:51.4999:18:17:633:0:0:0,-5.11751,-10 0/0:21.3969:7:7:257:0:0:0,-2.10721,-10 0/0:66.5514:22:22:784:0:0:0,-6.62266,-10 1/1:28.6549:18:0:0:18:650:-10,-5.41854,0 0/0:72.572:24:24:875:0:0:0,-7.22472,-10 0/0:69.5617:23:23:830:0:0:0,-6.92369,-10 0/0:45.4793:15:15:570:0:0:0,-4.51545,-10 0/0:75.5824:25:25:931:0:0:0,-7.52575,-10 0/0:78.5927:26:26:923:0:0:0,-7.82678,-10 0/0:18.3866:6:6:228:0:0:0,-1.80618,-10 0/0:36.4484:12:12:402:0:0:0,-3.61236,-10 0/0:45.4793:15:15:549:0:0:0,-4.51545,-10 0/0:18.3866:6:6:223:0:0:0,-1.80618,-10 0/0:48.4896:16:16:597:0:0:0,-4.81648,-10 0/0:36.4484:12:12:454:0:0:0,-3.61236,-10 0/0:24.4072:8:8:302:0:0:0,-2.40824,-10 1/1:22.6343:16:0:0:16:582:-10,-4.81648,0 0/0:63.5411:21:21:791:0:0:0,-6.32163,-10 0/0:33.4381:11:11:403:0:0:0,-3.31133,-10 0/0:78.5927:26:26:919:0:0:0,-7.82678,-10 0/0:78.5927:26:26:959:0:0:0,-7.82678,-10 0/0:45.4793:15:15:545:0:0:0,-4.51545,-10 0/1:99:24:16:585:8:302:-10,0,-10 0/0:63.5411:21:21:735:0:0:0,-6.32163,-10 0/0:57.5205:19:19:695:0:0:0,-5.71957,-10 0/0:99:33:33:1186:0:0:0,-9.93399,-10 0/0:66.5514:22:22:819:0:0:0,-6.62266,-10 0/0:39.4587:13:13:491:0:0:0,-3.91339,-10 0/0:99:47:47:1708:0:0:0,-10,-10 1/1:31.6652:19:0:0:19:667:-10,-5.71957,0 1/1:97.8884:41:0:0:41:1502:-10,-10,0 0/0:51.4999:17:17:631:0:0:0,-5.11751,-10 0/0:21.3969:7:7:232:0:0:0,-2.10721,-10 0/0:99:41:41:1489:0:0:0,-10,-10 0/0:30.4278:10:10:356:0:0:0,-3.0103,-10 0/0:54.5102:18:18:672:0:0:0,-5.41854,-10 0/0:24.4072:8:8:295:0:0:0,-2.40824,-10 0/0:66.5514:22:22:811:0:0:0,-6.62266,-10 0/0:42.469:14:14:528:0:0:0,-4.21442,-10 0/0:78.5927:26:26:940:0:0:0,-7.82678,-10 0/0:63.5411:21:21:778:0:0:0,-6.32163,-10 0/1:99:32:15:558:17:637:-10,0,-10 0/0:45.4793:15:15:543:0:0:0,-4.51545,-10 0/0:36.4484:12:12:413:0:0:0,-3.61236,-10 0/0:99:35:35:1234:0:0:0,-10,-10 0/0:63.5411:21:21:750:0:0:0,-6.32163,-10 0/0:30.4278:10:10:371:0:0:0,-3.0103,-10 0/0:75.5824:25:25:866:0:0:0,-7.52575,-10 0/0:24.4072:8:8:287:0:0:0,-2.40824,-10 0/0:63.5411:21:21:790:0:0:0,-6.32163,-10 0/0:75.5824:25:25:924:0:0:0,-7.52575,-10 0/0:51.4999:17:17:617:0:0:0,-5.11751,-10 0/0:48.4896:16:16:592:0:0:0,-4.81648,-10 0/0:75.5824:25:25:921:0:0:0,-7.52575,-10 0/0:54.5102:18:18:669:0:0:0,-5.41854,-10 0/0:27.4175:9:9:311:0:0:0,-2.70927,-10 0/0:42.469:14:14:483:0:0:0,-4.21442,-10 0/0:21.3969:7:7:266:0:0:0,-2.10721,-10 0/0:45.4793:15:15:544:0:0:0,-4.51545,-10 0/0:93.6429:31:31:1146:0:0:0,-9.33193,-10 0/0:72.572:24:24:859:0:0:0,-7.22472,-10 0/0:66.5514:22:22:780:0:0:0,-6.62266,-10 0/0:60.5308:20:20:710:0:0:0,-6.0206,-10 0/0:4.67527:17:16:577:1:38:0,-0.087061,-10 0/0:30.4278:10:10:375:0:0:0,-3.0103,-10 0/0:48.4896:16:16:602:0:0:0,-4.81648,-10 0/0:39.4587:13:13:470:0:0:0,-3.91339,-10 0/1:48.1251:2:1:38:1:38:-3.49897,0,-3.49897 0/0:51.4999:17:17:604:0:0:0,-5.11751,-10 0/1:99:29:14:510:15:567:-10,0,-10 0/0:39.4587:13:13:491:0:0:0,-3.91339,-10 scaffold_56 2024095 . G A 14540.5 . AB=0.523256;ABP=5.03027;AC=57;AF=0.309783;AN=184;AO=505;CIGAR=1X;DP=1654;DPB=1654;DPRA=1.02211;EPP=3.1178;EPPR=3.23898;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9547;NS=92;NUMALT=1;ODDS=0.806936;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=18708;QR=42293;RO=1149;RPP=1031.22;RPPR=2260.75;RUN=1;SAF=244;SAP=4.25298;SAR=261;SRF=559;SRP=4.82647;SRR=590;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:32.8718:20:18:668:2:76:-3.47815,0,-10 0/0:37.0579:11:11:415:0:0:0,-3.31133,-10 0/1:99:18:8:304:10:373:-10,0,-10 0/0:28.027:8:8:273:0:0:0,-2.40824,-10 0/1:99:17:7:242:10:357:-10,0,-10 1/1:21.7524:11:0:0:11:418:-10,-3.31133,0 0/0:85.2226:27:27:1018:0:0:0,-8.12781,-10 0/1:99:33:17:645:16:589:-10,0,-10 1/1:33.7936:15:0:0:15:568:-10,-4.51545,0 0/0:18.9961:5:5:178:0:0:0,-1.50515,-10 1/1:24.7627:12:0:0:12:432:-10,-3.61236,0 1/1:30.7833:14:0:0:14:505:-10,-4.21442,0 0/1:99:36:19:719:17:640:-10,0,-10 0/1:99:33:11:417:22:808:-10,0,-10 1/1:42.8245:18:0:0:18:675:-10,-5.41854,0 1/1:57.876:23:0:0:23:873:-10,-6.92369,0 0/0:82.2123:26:26:979:0:0:0,-7.82678,-10 0/0:25.0167:7:7:243:0:0:0,-2.10721,-10 0/0:37.0579:11:11:394:0:0:0,-3.31133,-10 0/0:97.2624:31:31:1136:0:0:0,-9.33193,-10 0/0:55.1197:17:17:617:0:0:0,-5.11751,-10 0/0:94.2528:30:30:1133:0:0:0,-9.0309,-10 0/0:37.0579:11:11:398:0:0:0,-3.31133,-10 0/0:85.2226:27:27:947:0:0:0,-8.12781,-10 0/0:46.0888:14:14:497:0:0:0,-4.21442,-10 0/1:99:12:5:186:7:265:-10,0,-10 0/0:46.0888:14:14:516:0:0:0,-4.21442,-10 1/1:27.773:13:0:0:13:473:-10,-3.91339,0 1/1:54.8657:22:0:0:22:832:-10,-6.62266,0 0/0:82.2123:26:26:962:0:0:0,-7.82678,-10 0/0:34.0476:10:10:380:0:0:0,-3.0103,-10 0/0:18.9961:5:5:186:0:0:0,-1.50515,-10 1/1:27.773:13:0:0:13:490:-10,-3.91339,0 0/0:18.9961:5:5:190:0:0:0,-1.50515,-10 0/0:52.1094:16:16:553:0:0:0,-4.81648,-10 0/1:0.735315:4:0:0:4:151:-10,-1.20412,0 1/1:24.7627:12:0:0:12:414:-10,-3.61236,0 0/1:99:34:15:566:19:711:-10,0,-10 1/1:36.8039:16:0:0:16:604:-10,-4.81648,0 0/1:99:14:7:266:7:262:-10,0,-10 0/1:99:22:13:487:9:331:-10,0,-10 0/1:24.6289:14:1:38:13:485:-10,0,-0.731708 1/1:30.7833:14:0:0:14:532:-10,-4.21442,0 0/1:99:15:8:300:7:266:-10,0,-10 0/0:61.1403:19:19:696:0:0:0,-5.71957,-10 0/1:99:15:8:304:7:260:-10,0,-10 0/1:99:38:21:779:17:637:-10,0,-10 0/0:85.2226:27:27:941:0:0:0,-8.12781,-10 0/0:58.13:18:18:684:0:0:0,-5.41854,-10 1/1:75.9377:29:0:0:29:1083:-10,-8.72987,0 0/0:37.0579:11:11:414:0:0:0,-3.31133,-10 0/0:88.2328:28:28:1024:0:0:0,-8.42884,-10 0/0:46.0888:14:14:506:0:0:0,-4.21442,-10 0/1:0.0853884:1:0:0:1:38:-3.8,-0.30103,0 0/0:82.2123:26:26:950:0:0:0,-7.82678,-10 0/0:37.0579:11:11:383:0:0:0,-3.31133,-10 0/0:61.1403:19:19:664:0:0:0,-5.71957,-10 0/0:31.0373:9:9:339:0:0:0,-2.70927,-10 1/1:48.8451:20:0:0:20:743:-10,-6.0206,0 1/1:15.7318:9:0:0:9:342:-10,-2.70927,0 0/0:99:34:34:1251:0:0:0,-10,-10 0/0:67.1609:21:21:757:0:0:0,-6.32163,-10 0/0:97.2624:31:31:1133:0:0:0,-9.33193,-10 0/0:52.1094:16:16:605:0:0:0,-4.81648,-10 0/0:31.0373:9:9:333:0:0:0,-2.70927,-10 0/0:79.2019:25:25:941:0:0:0,-7.52575,-10 0/1:99:20:14:531:6:227:-10,0,-10 0/0:49.0991:15:15:529:0:0:0,-4.51545,-10 0/0:88.2328:28:28:1039:0:0:0,-8.42884,-10 0/0:55.1197:17:17:640:0:0:0,-5.11751,-10 1/1:24.7627:12:0:0:12:432:-10,-3.61236,0 0/0:76.1917:24:24:898:0:0:0,-7.22472,-10 0/0:67.1609:21:21:785:0:0:0,-6.32163,-10 0/0:55.1197:17:17:624:0:0:0,-5.11751,-10 0/0:64.1506:20:20:750:0:0:0,-6.0206,-10 0/0:67.1609:21:21:784:0:0:0,-6.32163,-10 0/0:52.1094:16:16:589:0:0:0,-4.81648,-10 0/0:43.0785:13:13:487:0:0:0,-3.91339,-10 0/0:6.95479:1:1:38:0:0:0,-0.30103,-3.8 0/0:46.0888:14:14:508:0:0:0,-4.21442,-10 0/0:99:38:38:1413:0:0:0,-10,-10 0/1:99:25:13:486:12:410:-10,0,-10 0/0:94.2528:30:30:1104:0:0:0,-9.0309,-10 0/1:99:18:7:263:11:413:-10,0,-10 0/0:64.1506:20:20:712:0:0:0,-6.0206,-10 0/0:22.0064:6:6:228:0:0:0,-1.80618,-10 1/1:45.8348:19:0:0:19:668:-10,-5.71957,0 0/0:18.9961:5:5:189:0:0:0,-1.50515,-10 1/1:12.7215:8:0:0:8:291:-10,-2.40824,0 0/1:99:23:10:375:13:493:-10,0,-10 0/1:99:18:3:108:15:541:-10,0,-7.57315 0/0:61.1403:19:19:656:0:0:0,-5.71957,-10 scaffold_56 2067032 . C T 1005.32 . AB=0.534884;ABP=3.46479;AC=3;AF=0.0163043;AN=184;AO=42;CIGAR=1X;DP=1614;DPB=1614;DPRA=1.54642;EPP=3.0103;EPPR=17.1104;GTI=0;LEN=1;MEANALT=1;MQM=49.5952;MQMR=59.1031;NS=92;NUMALT=1;ODDS=1.30731;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1491;QR=57207;RO=1571;RPP=85.7331;RPPR=3302.41;RUN=1;SAF=20;SAP=3.21711;SAR=22;SRF=823;SRP=10.7853;SRR=748;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.1049:16:16:587:0:0:0,-4.81648,-10 0/0:23.0019:6:6:228:0:0:0,-1.80618,-10 0/0:38.0534:11:11:402:0:0:0,-3.31133,-10 0/0:35.0431:10:10:373:0:0:0,-3.0103,-10 0/0:32.0328:9:9:340:0:0:0,-2.70927,-10 0/0:13.971:3:3:114:0:0:0,-0.90309,-10 0/0:98.2564:31:31:1126:0:0:0,-9.33193,-10 0/0:74.177:23:23:818:0:0:0,-6.92369,-10 0/0:35.0431:10:10:356:0:0:0,-3.0103,-10 0/0:19.9916:5:5:190:0:0:0,-1.50515,-10 0/0:16.9813:4:4:130:0:0:0,-1.20412,-10 0/0:29.0225:8:8:293:0:0:0,-2.40824,-10 0/0:98.2564:31:31:1156:0:0:0,-9.33193,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:83.2078:26:26:976:0:0:0,-7.82678,-10 0/0:59.1255:18:18:674:0:0:0,-5.41854,-10 0/0:95.2476:30:30:1099:0:0:0,-9.0309,-10 0/0:44.074:13:13:480:0:0:0,-3.91339,-10 0/0:53.1049:16:16:587:0:0:0,-4.81648,-10 0/0:99:40:40:1437:0:0:0,-10,-10 0/0:44.074:13:13:461:0:0:0,-3.91339,-10 0/0:99:37:37:1378:0:0:0,-10,-10 0/0:26.0122:7:7:263:0:0:0,-2.10721,-10 0/0:56.1152:17:17:619:0:0:0,-5.11751,-10 0/0:77.1873:24:24:862:0:0:0,-7.22472,-10 0/0:74.177:23:23:854:0:0:0,-6.92369,-10 0/0:38.0534:11:11:379:0:0:0,-3.31133,-10 1/1:13.2145:17:0:0:17:615:-10,-5.11751,0 0/0:53.1049:16:16:603:0:0:0,-4.81648,-10 0/0:99:38:38:1378:0:0:0,-10,-10 0/0:7.95038:1:1:38:0:0:0,-0.30103,-3.8 0/0:44.074:13:13:484:0:0:0,-3.91339,-10 0/0:74.177:23:23:841:0:0:0,-6.92369,-10 0/0:23.0019:6:6:228:0:0:0,-1.80618,-10 0/0:62.1358:19:19:676:0:0:0,-5.71957,-10 0/0:13.971:3:3:112:0:0:0,-0.90309,-10 0/0:35.0431:10:10:373:0:0:0,-3.0103,-10 0/0:83.2078:26:26:972:0:0:0,-7.82678,-10 0/0:53.1049:16:16:606:0:0:0,-4.81648,-10 0/0:50.0946:15:15:570:0:0:0,-4.51545,-10 0/0:74.177:23:23:799:0:0:0,-6.92369,-10 0/0:50.0946:15:15:549:0:0:0,-4.51545,-10 0/0:74.177:23:23:819:0:0:0,-6.92369,-10 0/0:92.238:29:29:1071:0:0:0,-8.72987,-10 0/0:59.1255:18:18:661:0:0:0,-5.41854,-10 0/0:47.0843:14:14:487:0:0:0,-4.21442,-10 0/0:99:45:45:1640:0:0:0,-10,-10 0/0:89.2281:28:28:1004:0:0:0,-8.42884,-10 0/0:59.1255:18:18:647:0:0:0,-5.41854,-10 0/0:34.6404:26:25:845:1:38:0,-2.61181,-10 0/0:56.1152:17:17:644:0:0:0,-5.11751,-10 0/1:99:43:20:696:23:824:-10,0,-10 0/0:41.0637:12:12:416:0:0:0,-3.61236,-10 0/0:19.9916:5:5:186:0:0:0,-1.50515,-10 0/0:99:38:37:1282:0:0:0,-10,-10 0/0:41.0637:12:12:414:0:0:0,-3.61236,-10 0/0:65.1461:20:20:713:0:0:0,-6.0206,-10 0/0:26.0122:7:7:266:0:0:0,-2.10721,-10 0/0:50.0946:15:15:567:0:0:0,-4.51545,-10 0/0:47.0843:14:14:525:0:0:0,-4.21442,-10 0/0:42.132:20:19:695:1:14:0,-3.31957,-10 0/0:50.0946:15:15:516:0:0:0,-4.51545,-10 0/0:99:45:45:1639:0:0:0,-10,-10 0/0:65.1461:20:20:725:0:0:0,-6.0206,-10 0/0:32.0328:9:9:337:0:0:0,-2.70927,-10 0/0:80.1975:25:25:932:0:0:0,-7.52575,-10 0/0:41.0637:12:12:425:0:0:0,-3.61236,-10 0/0:26.0122:7:7:256:0:0:0,-2.10721,-10 0/0:77.1873:24:24:900:0:0:0,-7.22472,-10 0/0:26.0122:7:7:261:0:0:0,-2.10721,-10 0/0:35.0431:10:10:308:0:0:0,-3.0103,-10 0/0:86.218:27:27:1009:0:0:0,-8.12781,-10 0/0:65.1461:20:20:731:0:0:0,-6.0206,-10 0/0:50.0946:15:15:564:0:0:0,-4.51545,-10 0/0:86.218:27:27:1008:0:0:0,-8.12781,-10 0/0:38.0534:11:11:370:0:0:0,-3.31133,-10 0/0:41.0637:12:12:427:0:0:0,-3.61236,-10 0/0:44.074:13:13:490:0:0:0,-3.91339,-10 0/0:26.0122:7:7:248:0:0:0,-2.10721,-10 0/0:23.0019:6:6:200:0:0:0,-1.80618,-10 0/0:86.218:27:27:958:0:0:0,-8.12781,-10 0/0:92.238:29:29:1095:0:0:0,-8.72987,-10 0/0:56.1152:17:17:637:0:0:0,-5.11751,-10 0/0:59.1255:18:18:668:0:0:0,-5.41854,-10 0/0:77.1873:24:24:854:0:0:0,-7.22472,-10 0/0:13.971:3:3:114:0:0:0,-0.90309,-10 0/0:32.0328:9:9:313:0:0:0,-2.70927,-10 0/0:32.0328:9:9:339:0:0:0,-2.70927,-10 0/0:23.0019:6:6:223:0:0:0,-1.80618,-10 0/0:44.074:13:13:491:0:0:0,-3.91339,-10 0/0:44.074:13:13:467:0:0:0,-3.91339,-10 0/0:47.0843:14:14:508:0:0:0,-4.21442,-10 scaffold_56 2146367 . T C 3495.48 . AB=0.582609;ABP=9.82684;AC=17;AF=0.0923913;AN=184;AO=133;CIGAR=1X;DP=1390;DPB=1390;DPRA=0.909779;EPP=10.2104;EPPR=6.5085;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9833;NS=92;NUMALT=1;ODDS=0.214312;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4899;QR=46635;RO=1257;RPP=283.196;RPPR=2612.3;RUN=1;SAF=76;SAP=8.9043;SAR=57;SRF=637;SRP=3.50955;SRR=620;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.1742:14:14:509:0:0:0,-4.21442,-10 0/0:51.1639:13:13:466:0:0:0,-3.91339,-10 0/0:63.2051:17:17:612:0:0:0,-5.11751,-10 0/0:42.133:10:10:376:0:0:0,-3.0103,-10 0/0:21.0609:3:3:113:0:0:0,-0.90309,-10 0/1:15.7061:10:9:342:1:38:-1.7897,0,-10 1/1:55.1283:25:0:0:25:933:-10,-7.52575,0 1/1:28.0356:16:0:0:16:583:-10,-4.81648,0 0/1:0.104248:7:0:0:7:266:-10,-2.10721,0 0/0:18.0506:2:2:69:0:0:0,-0.60206,-6.555 0/0:36.1124:8:8:296:0:0:0,-2.40824,-10 0/0:33.1021:7:7:266:0:0:0,-2.10721,-10 0/0:81.2669:23:23:867:0:0:0,-6.92369,-10 0/0:72.236:20:20:707:0:0:0,-6.0206,-10 0/0:63.2051:17:17:646:0:0:0,-5.11751,-10 0/1:99:14:4:152:10:358:-10,0,-10 0/0:48.1536:12:12:456:0:0:0,-3.61236,-10 0/0:42.133:10:10:379:0:0:0,-3.0103,-10 0/0:57.1845:15:15:527:0:0:0,-4.51545,-10 0/0:99:33:33:1245:0:0:0,-9.93399,-10 0/1:99:9:4:146:5:190:-10,0,-10 0/0:84.2769:24:24:908:0:0:0,-7.22472,-10 0/0:36.1124:8:8:304:0:0:0,-2.40824,-10 0/0:39.1227:9:9:338:0:0:0,-2.70927,-10 0/0:72.236:20:20:752:0:0:0,-6.0206,-10 0/0:69.2257:19:19:690:0:0:0,-5.71957,-10 0/0:60.1948:16:16:593:0:0:0,-4.81648,-10 0/0:57.1845:15:15:566:0:0:0,-4.51545,-10 0/0:69.2257:19:19:706:0:0:0,-5.71957,-10 0/0:87.2868:25:25:916:0:0:0,-7.52575,-10 0/0:27.0815:5:5:183:0:0:0,-1.50515,-10 0/0:39.1227:9:9:342:0:0:0,-2.70927,-10 0/0:57.1845:15:15:568:0:0:0,-4.51545,-10 0/1:2.07252:11:0:0:11:416:-10,-3.31133,0 0/0:51.1639:13:13:490:0:0:0,-3.91339,-10 1/1:15.9944:12:0:0:12:444:-10,-3.61236,0 0/0:39.1227:9:9:330:0:0:0,-2.70927,-10 0/0:63.2051:17:17:637:0:0:0,-5.11751,-10 0/0:78.2566:22:22:800:0:0:0,-6.62266,-10 0/0:48.1536:12:12:450:0:0:0,-3.61236,-10 0/0:90.2975:26:26:954:0:0:0,-7.82678,-10 0/0:84.2769:24:24:890:0:0:0,-7.22472,-10 0/0:60.1948:16:16:587:0:0:0,-4.81648,-10 0/0:72.236:20:20:731:0:0:0,-6.0206,-10 0/1:99:20:14:511:6:215:-10,0,-10 0/0:36.1124:8:8:300:0:0:0,-2.40824,-10 0/0:99:38:38:1426:0:0:0,-10,-10 0/0:72.236:20:20:720:0:0:0,-6.0206,-10 0/0:36.1124:8:8:304:0:0:0,-2.40824,-10 0/0:99:32:32:1194:0:0:0,-9.63296,-10 0/0:36.1124:8:8:304:0:0:0,-2.40824,-10 0/0:60.1948:16:16:582:0:0:0,-4.81648,-10 0/0:57.1845:15:15:560:0:0:0,-4.51545,-10 0/0:24.0712:4:4:149:0:0:0,-1.20412,-10 0/0:96.3171:28:28:1031:0:0:0,-8.42884,-10 0/0:36.1124:8:8:302:0:0:0,-2.40824,-10 0/0:42.133:10:10:358:0:0:0,-3.0103,-10 0/0:27.0815:5:5:188:0:0:0,-1.50515,-10 0/0:51.1639:13:13:494:0:0:0,-3.91339,-10 0/0:42.133:10:10:376:0:0:0,-3.0103,-10 0/0:78.2566:22:22:836:0:0:0,-6.62266,-10 0/0:48.1536:12:12:448:0:0:0,-3.61236,-10 0/0:99:33:33:1247:0:0:0,-9.93399,-10 0/0:54.1742:14:14:507:0:0:0,-4.21442,-10 0/0:51.1639:13:13:489:0:0:0,-3.91339,-10 0/0:99:29:29:1089:0:0:0,-8.72987,-10 0/1:99:23:11:405:12:455:-10,0,-10 0/0:45.1433:11:11:413:0:0:0,-3.31133,-10 0/0:84.2769:24:24:854:0:0:0,-7.22472,-10 0/0:48.1536:12:12:418:0:0:0,-3.61236,-10 0/0:42.133:10:10:379:0:0:0,-3.0103,-10 0/0:99:30:30:1103:0:0:0,-9.0309,-10 0/0:90.2975:26:26:966:0:0:0,-7.82678,-10 0/0:63.2051:17:17:644:0:0:0,-5.11751,-10 0/0:66.2154:18:18:657:0:0:0,-5.41854,-10 0/0:45.1433:11:11:410:0:0:0,-3.31133,-10 0/0:45.1433:11:11:417:0:0:0,-3.31133,-10 0/0:30.0918:6:6:226:0:0:0,-1.80618,-10 0/0:27.0815:5:5:168:0:0:0,-1.50515,-10 0/0:39.1227:9:9:333:0:0:0,-2.70927,-10 0/0:99:38:38:1422:0:0:0,-10,-10 0/1:99:16:6:228:10:378:-10,0,-10 0/0:57.1845:15:15:546:0:0:0,-4.51545,-10 0/0:69.2257:19:19:715:0:0:0,-5.71957,-10 0/0:60.1948:16:16:605:0:0:0,-4.81648,-10 0/0:33.1021:7:7:256:0:0:0,-2.10721,-10 1/1:19.0047:13:0:0:13:489:-10,-3.91339,0 0/1:0.0258283:5:0:0:5:134:-10,-1.50515,0 0/0:18.0506:2:2:76:0:0:0,-0.60206,-7.22 0/0:39.1227:9:9:340:0:0:0,-2.70927,-10 0/0:54.1742:14:14:524:0:0:0,-4.21442,-10 0/0:30.0918:6:6:206:0:0:0,-1.80618,-10 scaffold_56 2146379 . T C 3512.54 . AB=0.510417;ABP=3.19126;AC=17;AF=0.0923913;AN=184;AO=139;CIGAR=1X;DP=1379;DPB=1379;DPRA=1.31149;EPP=6.52527;EPPR=3.5786;GTI=2;LEN=1;MEANALT=1.05882;MQM=59.9856;MQMR=60;NS=92;NUMALT=1;ODDS=0.736721;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5012;QR=45330;RO=1238;RPP=304.845;RPPR=2673.95;RUN=1;SAF=77;SAP=6.52527;SAR=62;SRF=626;SRP=3.35409;SRR=612;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.621:14:14:508:0:0:0,-4.21442,-10 0/0:51.6107:13:13:467:0:0:0,-3.91339,-10 0/0:63.6519:17:17:635:0:0:0,-5.11751,-10 0/0:42.5798:10:10:374:0:0:0,-3.0103,-10 0/0:21.5077:3:3:114:0:0:0,-0.90309,-10 0/0:42.5798:10:10:380:0:0:0,-3.0103,-10 0/0:87.7339:25:25:936:0:0:0,-7.52575,-10 0/0:57.6313:15:15:541:0:0:0,-4.51545,-10 0/0:33.5489:7:7:260:0:0:0,-2.10721,-10 0/0:18.4974:2:2:71:0:0:0,-0.60206,-6.745 0/0:36.5592:8:8:270:0:0:0,-2.40824,-10 0/0:33.5489:7:7:262:0:0:0,-2.10721,-10 0/0:81.7137:23:23:814:0:0:0,-6.92369,-10 0/0:72.6828:20:20:738:0:0:0,-6.0206,-10 0/0:63.6519:17:17:635:0:0:0,-5.11751,-10 0/0:54.621:14:14:485:0:0:0,-4.21442,-10 0/0:48.6004:12:12:443:0:0:0,-3.61236,-10 0/0:42.5798:10:10:370:0:0:0,-3.0103,-10 0/0:57.6313:15:15:532:0:0:0,-4.51545,-10 0/1:99:33:19:683:14:522:-10,0,-10 0/0:39.5695:9:9:342:0:0:0,-2.70927,-10 0/1:99:23:12:452:11:417:-10,0,-10 0/1:1.39067:8:0:0:8:299:-10,-2.40824,0 0/0:39.5695:9:9:339:0:0:0,-2.70927,-10 0/0:72.6828:20:20:755:0:0:0,-6.0206,-10 0/1:99:19:12:452:7:234:-10,0,-10 1/1:34.5873:16:0:0:16:546:-10,-4.81648,0 0/0:57.6313:15:15:561:0:0:0,-4.51545,-10 0/0:69.6725:19:19:710:0:0:0,-5.71957,-10 0/1:99:24:10:380:14:491:-10,0,-10 0/0:27.5283:5:5:187:0:0:0,-1.50515,-10 0/0:39.5695:9:9:342:0:0:0,-2.70927,-10 0/0:57.6313:15:15:568:0:0:0,-4.51545,-10 0/0:45.5901:11:11:393:0:0:0,-3.31133,-10 1/1:25.5564:13:0:0:13:487:-10,-3.91339,0 0/0:48.6004:12:12:444:0:0:0,-3.61236,-10 0/0:39.5695:9:9:328:0:0:0,-2.70927,-10 0/1:99:17:10:367:7:266:-10,0,-10 0/0:78.7033:22:22:782:0:0:0,-6.62266,-10 0/0:48.6004:12:12:422:0:0:0,-3.61236,-10 0/1:99:26:15:561:11:395:-10,0,-10 0/0:81.7137:23:23:843:0:0:0,-6.92369,-10 0/0:60.6416:16:16:550:0:0:0,-4.81648,-10 0/0:72.6828:20:20:703:0:0:0,-6.0206,-10 0/1:99:20:6:228:14:477:-10,0,-10 0/0:36.5592:8:8:304:0:0:0,-2.40824,-10 0/0:99:38:38:1411:0:0:0,-10,-10 0/0:69.6725:19:19:698:0:0:0,-5.71957,-10 0/0:36.5592:8:8:302:0:0:0,-2.40824,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:36.5592:8:8:304:0:0:0,-2.40824,-10 0/0:60.6416:16:16:581:0:0:0,-4.81648,-10 0/0:57.6313:15:15:563:0:0:0,-4.51545,-10 0/0:24.518:4:4:143:0:0:0,-1.20412,-10 0/0:47.9186:28:26:948:1:38:0,-3.15645,-10 0/0:33.5489:7:7:244:0:0:0,-2.10721,-10 0/0:39.5695:10:9:341:0:0:0,-2.70927,-10 0/0:27.5283:5:5:190:0:0:0,-1.50515,-10 0/0:51.6107:13:13:492:0:0:0,-3.91339,-10 0/0:42.5798:10:10:376:0:0:0,-3.0103,-10 0/0:75.6931:21:21:797:0:0:0,-6.32163,-10 0/0:48.6004:12:12:397:0:0:0,-3.61236,-10 0/0:99:33:33:1169:0:0:0,-9.93399,-10 0/0:54.621:14:14:527:0:0:0,-4.21442,-10 0/0:51.6107:13:13:471:0:0:0,-3.91339,-10 0/0:55.0288:29:28:1027:1:34:0,-3.86747,-10 0/0:81.7137:23:23:871:0:0:0,-6.92369,-10 0/0:45.5901:11:11:408:0:0:0,-3.31133,-10 0/0:84.7238:24:24:863:0:0:0,-7.22472,-10 0/0:48.6004:12:12:415:0:0:0,-3.61236,-10 0/0:39.5695:9:9:295:0:0:0,-2.70927,-10 0/0:51.0288:29:28:1016:1:38:0,-3.46747,-10 0/0:90.7439:26:26:969:0:0:0,-7.82678,-10 0/0:60.6416:16:16:595:0:0:0,-4.81648,-10 0/0:63.6519:17:17:607:0:0:0,-5.11751,-10 0/0:45.5901:11:11:394:0:0:0,-3.31133,-10 0/0:45.5901:11:11:412:0:0:0,-3.31133,-10 0/1:0.308178:6:0:0:6:221:-10,-1.80618,0 0/0:27.5283:5:5:186:0:0:0,-1.50515,-10 1/1:13.5152:9:0:0:9:319:-10,-2.70927,0 0/0:99:38:38:1391:0:0:0,-10,-10 0/0:60.6416:16:16:585:0:0:0,-4.81648,-10 0/0:57.6313:15:15:563:0:0:0,-4.51545,-10 0/0:69.6725:19:19:711:0:0:0,-5.71957,-10 0/0:60.6416:16:16:599:0:0:0,-4.81648,-10 0/0:33.5489:7:7:265:0:0:0,-2.10721,-10 0/0:51.6107:13:13:476:0:0:0,-3.91339,-10 0/0:27.5283:5:5:157:0:0:0,-1.50515,-10 0/1:30.7472:2:1:38:1:38:-3.49897,0,-3.49897 0/0:39.5695:9:9:295:0:0:0,-2.70927,-10 0/1:99:14:9:335:5:190:-10,0,-10 0/0:30.5386:6:6:199:0:0:0,-1.80618,-10 scaffold_56 2208787 . TG T 592.691 . AB=0;ABP=0;AC=2;AF=0.0108696;AN=184;AO=25;CIGAR=1M1D1M;DP=1471;DPB=1462.67;DPRA=1.57331;EPP=5.18177;EPPR=5.18478;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9785;NS=92;NUMALT=1;ODDS=6.30674;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=893;QR=52719;RO=1442;RPP=48.9587;RPPR=3013.85;RUN=1;SAF=16;SAP=7.26639;SAR=9;SRF=754;SRP=9.56989;SRR=688;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:54.5049:11:11:408:0:0:0,-3.31133,-10 0|0:60.5255:13:13:469:0:0:0,-3.91339,-10 0|0:66.5461:15:15:547:0:0:0,-4.51545,-10 0|0:69.5564:16:16:558:0:0:0,-4.81648,-10 0|0:57.5152:12:12:434:0:0:0,-3.61236,-10 0|0:45.474:8:8:304:0:0:0,-2.40824,-10 0|0:99:33:33:1211:0:0:0,-9.93399,-10 0|0:75.577:18:18:644:0:0:0,-5.41854,-10 0|0:57.5152:12:12:432:0:0:0,-3.61236,-10 0|0:36.4431:5:5:171:0:0:0,-1.50515,-10 0|0:39.4534:6:6:228:0:0:0,-1.80618,-10 0|0:39.4534:6:6:227:0:0:0,-1.80618,-10 0|0:99:26:26:978:0:0:0,-7.82678,-10 0|0:84.6079:21:21:780:0:0:0,-6.32163,-10 0|0:90.6285:23:23:849:0:0:0,-6.92369,-10 0|0:90.6285:23:23:845:0:0:0,-6.92369,-10 0|0:81.5975:20:20:740:0:0:0,-6.0206,-10 0|0:48.4843:9:9:326:0:0:0,-2.70927,-10 0|0:51.4946:10:10:365:0:0:0,-3.0103,-10 0|0:99:30:30:1066:0:0:0,-9.0309,-10 0|0:51.4946:10:10:375:0:0:0,-3.0103,-10 0|0:99:27:27:989:0:0:0,-8.12781,-10 0|0:39.4534:6:6:203:0:0:0,-1.80618,-10 0|0:69.5564:16:16:574:0:0:0,-4.81648,-10 0|0:69.5564:16:16:596:0:0:0,-4.81648,-10 0|0:99:30:30:1097:0:0:0,-9.0309,-10 0|0:84.6079:21:21:751:0:0:0,-6.32163,-10 0|0:54.5049:11:11:416:0:0:0,-3.31133,-10 0|0:63.5358:14:14:515:0:0:0,-4.21442,-10 0|0:78.5873:19:19:705:0:0:0,-5.71957,-10 0|0:27.4122:2:2:74:0:0:0,-0.60206,-7.03 0|0:39.4534:6:6:227:0:0:0,-1.80618,-10 0|0:87.6182:23:22:823:0:0:0,-6.62266,-10 0|0:51.4946:10:10:346:0:0:0,-3.0103,-10 0|0:57.5152:12:12:428:0:0:0,-3.61236,-10 0|0:39.4534:6:6:226:0:0:0,-1.80618,-10 0|0:57.5152:12:12:446:0:0:0,-3.61236,-10 0|0:84.6079:21:21:763:0:0:0,-6.32163,-10 0|0:60.5255:13:13:468:0:0:0,-3.91339,-10 0|0:39.4534:6:6:210:0:0:0,-1.80618,-10 0|0:99:28:28:1044:0:0:0,-8.42884,-10 0|0:57.5152:12:12:439:0:0:0,-3.61236,-10 0|0:60.5255:13:13:490:0:0:0,-3.91339,-10 0|0:75.577:18:18:663:0:0:0,-5.41854,-10 0|0:90.6285:23:23:815:0:0:0,-6.92369,-10 0|0:87.6182:22:22:787:0:0:0,-6.62266,-10 0|0:81.5975:20:20:744:0:0:0,-6.0206,-10 0|0:72.5667:17:17:610:0:0:0,-5.11751,-10 0|0:54.5049:11:11:415:0:0:0,-3.31133,-10 0|0:99:29:29:1067:0:0:0,-8.72987,-10 0|0:63.5358:14:14:516:0:0:0,-4.21442,-10 0|0:99:41:41:1461:0:0:0,-10,-10 0|0:54.5049:11:11:383:0:0:0,-3.31133,-10 0|0:45.474:8:8:283:0:0:0,-2.40824,-10 0|0:99:35:35:1290:0:0:0,-10,-10 0|0:45.474:8:8:290:0:0:0,-2.40824,-10 0|0:81.5975:20:20:736:0:0:0,-6.0206,-10 0|0:72.5667:17:17:626:0:0:0,-5.11751,-10 0|0:51.4946:10:10:355:0:0:0,-3.0103,-10 0|0:45.474:8:8:279:0:0:0,-2.40824,-10 0|0:87.6182:22:22:803:0:0:0,-6.62266,-10 0|0:57.5152:12:12:425:0:0:0,-3.61236,-10 0|0:99:32:32:1176:0:0:0,-9.63296,-10 0|0:48.4843:9:9:316:0:0:0,-2.70927,-10 0|0:36.4431:5:5:176:0:0:0,-1.50515,-10 0|0:99:28:27:997:0:0:0,-8.12781,-10 0|0:99:28:27:1008:0:0:0,-8.12781,-10 0|0:54.5049:11:11:392:0:0:0,-3.31133,-10 0|0:99:26:26:968:0:0:0,-7.82678,-10 0|0:48.4843:9:9:324:0:0:0,-2.70927,-10 0|0:72.5667:17:17:629:0:0:0,-5.11751,-10 0|0:99:26:26:964:0:0:0,-7.82678,-10 0|0:69.5564:17:16:568:0:0:0,-4.81648,-10 0|0:48.4843:9:9:328:0:0:0,-2.70927,-10 1|1:48.3724:25:0:0:25:893:-10,-7.52575,0 0|0:75.577:18:18:640:0:0:0,-5.41854,-10 0|0:57.5152:12:12:436:0:0:0,-3.61236,-10 0|0:54.5049:11:11:395:0:0:0,-3.31133,-10 0|0:39.4534:6:6:227:0:0:0,-1.80618,-10 0|0:60.5255:13:13:477:0:0:0,-3.91339,-10 0|0:99:26:26:976:0:0:0,-7.82678,-10 0|0:72.5667:17:17:622:0:0:0,-5.11751,-10 0|0:81.5975:20:20:748:0:0:0,-6.0206,-10 0|0:66.5461:15:15:528:0:0:0,-4.51545,-10 0|0:87.6182:22:22:811:0:0:0,-6.62266,-10 0|0:30.4225:3:3:113:0:0:0,-0.90309,-10 0|0:48.4843:9:9:333:0:0:0,-2.70927,-10 0|0:63.5358:14:14:532:0:0:0,-4.21442,-10 0|0:30.4225:3:3:112:0:0:0,-0.90309,-10 0|0:54.5049:11:11:417:0:0:0,-3.31133,-10 0|0:69.5564:16:16:565:0:0:0,-4.81648,-10 0|0:69.5564:16:16:606:0:0:0,-4.81648,-10 scaffold_56 2208832 . C T 1144.83 . AB=0.592105;ABP=8.61041;AC=4;AF=0.0217391;AN=184;AO=48;CIGAR=1X;DP=1461;DPB=1461;DPRA=0.978973;EPP=5.9056;EPPR=4.48715;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9816;NS=92;NUMALT=1;ODDS=3.46845;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1687;QR=51153;RO=1413;RPP=107.241;RPPR=3045.3;RUN=1;SAF=28;SAP=5.9056;SAR=20;SRF=719;SRP=3.97079;SRR=694;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.8945:12:12:419:0:0:0,-3.61236,-10 0/0:46.8945:12:12:415:0:0:0,-3.61236,-10 0/0:55.9254:15:15:535:0:0:0,-4.51545,-10 0/0:58.9357:16:16:541:0:0:0,-4.81648,-10 0/0:46.8945:12:12:430:0:0:0,-3.61236,-10 0/0:34.8533:8:8:299:0:0:0,-2.40824,-10 0/0:99:33:33:1171:0:0:0,-9.93399,-10 0/0:64.9563:18:18:621:0:0:0,-5.41854,-10 0/0:25.8234:12:11:417:1:15:0,-1.03318,-10 0/0:25.8224:5:5:177:0:0:0,-1.50515,-10 0/0:28.8327:6:6:206:0:0:0,-1.80618,-10 0/0:28.8327:6:6:228:0:0:0,-1.80618,-10 0/0:89.0382:26:26:957:0:0:0,-7.82678,-10 0/0:73.9872:21:21:778:0:0:0,-6.32163,-10 0/0:80.0078:23:23:799:0:0:0,-6.92369,-10 0/1:99:22:10:355:12:432:-10,0,-10 0/0:67.9666:19:19:675:0:0:0,-5.71957,-10 0/0:37.8636:9:9:332:0:0:0,-2.70927,-10 0/0:40.8739:10:10:379:0:0:0,-3.0103,-10 0/0:99:31:31:1094:0:0:0,-9.33193,-10 0/0:40.8739:10:10:360:0:0:0,-3.0103,-10 0/0:89.0382:26:26:983:0:0:0,-7.82678,-10 0/0:28.8327:6:6:226:0:0:0,-1.80618,-10 0/0:55.9254:15:15:550:0:0:0,-4.51545,-10 0/0:55.9254:15:15:553:0:0:0,-4.51545,-10 0/0:99:30:30:1128:0:0:0,-9.0309,-10 0/0:76.9975:22:22:778:0:0:0,-6.62266,-10 0/0:43.8842:11:11:412:0:0:0,-3.31133,-10 0/0:52.9151:14:14:509:0:0:0,-4.21442,-10 0/0:70.9769:20:20:715:0:0:0,-6.0206,-10 0/0:16.7915:2:2:76:0:0:0,-0.60206,-7.22 0/0:28.8327:6:6:226:0:0:0,-1.80618,-10 0/0:80.0078:23:23:859:0:0:0,-6.92369,-10 0/0:40.8739:10:10:355:0:0:0,-3.0103,-10 0/0:43.8842:11:11:393:0:0:0,-3.31133,-10 0/0:28.8327:6:6:228:0:0:0,-1.80618,-10 0/0:46.8945:12:12:425:0:0:0,-3.61236,-10 0/0:76.9975:22:22:823:0:0:0,-6.62266,-10 0/0:49.9048:13:13:448:0:0:0,-3.91339,-10 0/0:28.8327:6:6:224:0:0:0,-1.80618,-10 0/0:92.0495:27:27:993:0:0:0,-8.12781,-10 0/0:28.4861:13:12:452:1:15:0,-1.29945,-10 0/0:46.8945:12:12:449:0:0:0,-3.61236,-10 0/0:64.9563:18:18:660:0:0:0,-5.41854,-10 0/0:80.0078:23:23:838:0:0:0,-6.92369,-10 0/0:76.9975:22:22:798:0:0:0,-6.62266,-10 0/0:70.9769:20:20:725:0:0:0,-6.0206,-10 0/0:61.946:17:17:599:0:0:0,-5.11751,-10 0/0:43.8842:11:11:416:0:0:0,-3.31133,-10 0/0:95.0603:28:28:981:0:0:0,-8.42884,-10 0/0:49.9048:13:13:480:0:0:0,-3.91339,-10 0/0:99:41:41:1443:0:0:0,-10,-10 0/0:43.8842:11:11:380:0:0:0,-3.31133,-10 0/0:34.8533:8:8:281:0:0:0,-2.40824,-10 0/0:99:36:36:1317:0:0:0,-10,-10 0/0:34.8533:8:8:292:0:0:0,-2.40824,-10 0/0:70.9769:20:20:727:0:0:0,-6.0206,-10 0/0:61.946:17:17:594:0:0:0,-5.11751,-10 0/0:46.8945:12:12:428:0:0:0,-3.61236,-10 0/0:15.5432:8:7:244:1:15:0,-0.00514998,-10 0/0:76.9975:22:22:779:0:0:0,-6.62266,-10 0/0:46.8945:12:12:434:0:0:0,-3.61236,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:34.8533:8:8:276:0:0:0,-2.40824,-10 0/0:28.8327:6:6:218:0:0:0,-1.80618,-10 0/1:99:28:14:507:14:530:-10,0,-10 0/0:95.0603:28:28:1054:0:0:0,-8.42884,-10 0/1:0.0650888:11:0:0:11:392:-10,-3.31133,0 0/0:86.0282:25:25:947:0:0:0,-7.52575,-10 0/0:34.8533:8:8:299:0:0:0,-2.40824,-10 0/0:61.946:17:17:609:0:0:0,-5.11751,-10 0/0:89.0382:26:26:934:0:0:0,-7.82678,-10 0/0:61.946:17:17:576:0:0:0,-5.11751,-10 0/0:37.8636:9:9:316:0:0:0,-2.70927,-10 0/0:83.018:24:24:862:0:0:0,-7.22472,-10 0/0:61.946:17:17:568:0:0:0,-5.11751,-10 0/0:46.8945:12:12:449:0:0:0,-3.61236,-10 0/0:43.8842:11:11:395:0:0:0,-3.31133,-10 0/0:28.8327:6:6:214:0:0:0,-1.80618,-10 0/0:49.9048:13:13:469:0:0:0,-3.91339,-10 0/0:83.018:24:24:892:0:0:0,-7.22472,-10 0/0:64.9563:18:18:683:0:0:0,-5.41854,-10 0/0:70.9769:20:20:737:0:0:0,-6.0206,-10 0/1:99:15:7:231:8:288:-10,0,-10 0/0:76.9975:22:22:792:0:0:0,-6.62266,-10 0/0:19.8018:3:3:114:0:0:0,-0.90309,-10 0/0:37.8636:9:9:315:0:0:0,-2.70927,-10 0/0:52.9151:14:14:530:0:0:0,-4.21442,-10 0/0:19.8018:3:3:112:0:0:0,-0.90309,-10 0/0:43.8842:11:11:416:0:0:0,-3.31133,-10 0/0:55.9254:15:15:533:0:0:0,-4.51545,-10 0/0:58.9357:16:16:594:0:0:0,-4.81648,-10 scaffold_56 2243302 . C T 3780 . AB=0.532338;ABP=4.83607;AC=9;AF=0.048913;AN=184;AO=139;CIGAR=1X;DP=2439;DPB=2439;DPRA=1.27448;EPP=3.1509;EPPR=3.2522;GTI=0;LEN=1;MEANALT=1;MQM=59.9496;MQMR=59.997;NS=92;NUMALT=1;ODDS=2.36566;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5069;QR=83888;RO=2298;RPP=304.845;RPPR=4958.37;RUN=1;SAF=68;SAP=3.1509;SAR=71;SRF=1145;SRP=3.07078;SRR=1153;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:82.3447:25:25:932:0:0:0,-7.52575,-10 0/0:46.2213:13:13:444:0:0:0,-3.91339,-10 0/0:99:39:39:1404:0:0:0,-10,-10 0/0:49.2316:14:14:502:0:0:0,-4.21442,-10 0/0:82.3447:25:25:933:0:0:0,-7.52575,-10 0/0:49.2316:14:14:529:0:0:0,-4.21442,-10 0/0:99:40:40:1494:0:0:0,-10,-10 0/1:99:37:18:637:19:657:-10,0,-10 1/1:37.8009:20:0:0:20:746:-10,-6.0206,0 0/0:25.1492:6:6:226:0:0:0,-1.80618,-10 0/0:31.1698:8:8:268:0:0:0,-2.40824,-10 0/0:34.1801:9:9:287:0:0:0,-2.70927,-10 0/0:99:36:36:1294:0:0:0,-10,-10 0/0:99:46:46:1710:0:0:0,-10,-10 0/1:99:34:15:559:19:675:-10,0,-10 0/1:99:31:19:696:12:434:-10,0,-10 0/0:94.3852:29:29:1048:0:0:0,-8.72987,-10 0/0:46.2213:13:13:494:0:0:0,-3.91339,-10 0/0:99:40:40:1495:0:0:0,-10,-10 0/0:99:46:46:1704:0:0:0,-10,-10 0/0:79.3345:24:24:901:0:0:0,-7.22472,-10 0/0:99:40:40:1471:0:0:0,-10,-10 1/1:10.7082:11:0:0:11:416:-10,-3.31133,0 0/0:85.3551:26:26:964:0:0:0,-7.82678,-10 0/0:88.3653:27:27:1007:0:0:0,-8.12781,-10 0/0:94.3852:29:29:1031:0:0:0,-8.72987,-10 0/0:61.2728:18:18:654:0:0:0,-5.41854,-10 0/0:67.2934:20:20:721:0:0:0,-6.0206,-10 0/0:79.3345:24:24:880:0:0:0,-7.22472,-10 0/1:99:42:16:598:26:959:-10,0,-10 0/0:49.2316:14:14:527:0:0:0,-4.21442,-10 0/0:64.2831:19:19:678:0:0:0,-5.71957,-10 0/0:43.211:12:12:424:0:0:0,-3.61236,-10 0/0:40.2007:11:11:391:0:0:0,-3.31133,-10 0/0:94.3852:29:29:984:0:0:0,-8.72987,-10 0/0:25.1492:6:6:217:0:0:0,-1.80618,-10 0/0:40.2007:11:11:391:0:0:0,-3.31133,-10 0/0:99:47:47:1731:0:0:0,-10,-10 0/0:85.3551:26:26:976:0:0:0,-7.82678,-10 0/0:64.2831:19:19:709:0:0:0,-5.71957,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:70.3037:21:21:759:0:0:0,-6.32163,-10 0/0:79.3345:24:24:884:0:0:0,-7.22472,-10 0/0:99:34:34:1264:0:0:0,-10,-10 0/0:99:36:36:1327:0:0:0,-10,-10 0/0:58.2625:17:17:595:0:0:0,-5.11751,-10 0/0:99:69:69:2475:0:0:0,-10,-10 0/0:99:49:48:1764:0:0:0,-10,-10 0/0:67.2934:20:20:717:0:0:0,-6.0206,-10 0/0:99:49:49:1795:0:0:0,-10,-10 0/0:40.2007:11:11:388:0:0:0,-3.31133,-10 0/0:99:45:45:1622:0:0:0,-10,-10 0/0:64.2831:19:19:674:0:0:0,-5.71957,-10 0/0:49.2316:14:14:505:0:0:0,-4.21442,-10 0/1:99:57:26:949:31:1144:-10,0,-10 0/0:67.2934:20:20:745:0:0:0,-6.0206,-10 0/0:85.3551:26:26:973:0:0:0,-7.82678,-10 0/0:40.2007:11:11:414:0:0:0,-3.31133,-10 0/0:70.3037:21:21:749:0:0:0,-6.32163,-10 0/0:43.211:12:12:456:0:0:0,-3.61236,-10 0/0:99:46:46:1663:0:0:0,-10,-10 0/0:53.7711:32:31:1132:1:38:0,-4.32781,-10 0/0:99:47:47:1706:0:0:0,-10,-10 0/0:88.3653:27:27:974:0:0:0,-8.12781,-10 0/0:67.2934:20:20:753:0:0:0,-6.0206,-10 0/0:99:40:40:1467:0:0:0,-10,-10 0/0:85.3551:26:26:956:0:0:0,-7.82678,-10 0/0:37.1904:10:10:354:0:0:0,-3.0103,-10 0/0:99:39:39:1462:0:0:0,-10,-10 0/0:73.314:22:22:815:0:0:0,-6.62266,-10 0/0:61.2728:18:18:671:0:0:0,-5.41854,-10 0/0:99:39:39:1439:0:0:0,-10,-10 0/0:99:35:35:1320:0:0:0,-10,-10 0/0:61.2728:18:18:651:0:0:0,-5.41854,-10 0/0:99:38:38:1426:0:0:0,-10,-10 0/0:73.314:23:22:768:0:0:0,-6.62266,-10 0/0:73.314:22:22:819:0:0:0,-6.62266,-10 0/0:67.2934:20:20:725:0:0:0,-6.0206,-10 0/0:34.1801:9:9:315:0:0:0,-2.70927,-10 0/0:40.2007:11:11:408:0:0:0,-3.31133,-10 0/0:99:59:59:2201:0:0:0,-10,-10 0/0:99:34:34:1198:0:0:0,-10,-10 0/0:97.3946:30:30:1086:0:0:0,-9.0309,-10 0/0:99:36:36:1334:0:0:0,-10,-10 0/0:91.3754:28:28:1021:0:0:0,-8.42884,-10 0/0:58.2625:17:17:597:0:0:0,-5.11751,-10 0/0:73.314:22:22:788:0:0:0,-6.62266,-10 0/0:70.3037:21:21:738:0:0:0,-6.32163,-10 0/0:28.1595:7:7:233:0:0:0,-2.10721,-10 0/0:70.3037:21:21:790:0:0:0,-6.32163,-10 0/0:76.3243:23:23:782:0:0:0,-6.92369,-10 0/0:99:31:31:1100:0:0:0,-9.33193,-10 scaffold_56 2313951 . G A 2263.37 . AB=0.588652;ABP=12.6356;AC=6;AF=0.0326087;AN=184;AO=83;CIGAR=1X;DP=2008;DPB=2008;DPRA=1.08249;EPP=3.24576;EPPR=3.20094;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9953;NS=92;NUMALT=1;ODDS=3.07878;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3087;QR=69914;RO=1925;RPP=183.243;RPPR=4183.09;RUN=1;SAF=40;SAP=3.24576;SAR=43;SRF=956;SRP=3.20094;SRR=969;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.1225:18:18:657:0:0:0,-5.41854,-10 0/0:31.0092:7:7:260:0:0:0,-2.10721,-10 0/0:76.1636:22:22:815:0:0:0,-6.62266,-10 0/0:52.0813:14:14:509:0:0:0,-4.21442,-10 0/1:99:13:9:320:4:144:-10,0,-10 0/0:31.0092:7:7:242:0:0:0,-2.10721,-10 0/0:99:38:38:1388:0:0:0,-10,-10 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:70.1431:20:20:742:0:0:0,-6.0206,-10 0/0:18.968:3:3:114:0:0:0,-0.90309,-10 0/0:34.0195:8:8:292:0:0:0,-2.40824,-10 0/1:0.00285076:5:0:0:5:190:-10,-1.50515,0 0/1:99:45:23:862:22:828:-10,0,-10 0/0:99:45:45:1568:0:0:0,-10,-10 0/1:99:33:13:462:20:743:-10,0,-10 0/0:79.1739:23:23:873:0:0:0,-6.92369,-10 0/0:82.1841:24:24:866:0:0:0,-7.22472,-10 0/0:49.071:13:13:485:0:0:0,-3.91339,-10 0/0:70.1431:20:20:743:0:0:0,-6.0206,-10 0/0:99:37:37:1346:0:0:0,-10,-10 0/0:58.1019:16:16:601:0:0:0,-4.81648,-10 0/0:85.1943:25:25:925:0:0:0,-7.52575,-10 0/0:46.0607:12:12:393:0:0:0,-3.61236,-10 0/0:91.2141:27:27:986:0:0:0,-8.12781,-10 0/0:49.071:13:13:479:0:0:0,-3.91339,-10 0/0:91.2141:27:27:1006:0:0:0,-8.12781,-10 0/0:91.2141:27:27:1002:0:0:0,-8.12781,-10 0/0:40.0401:10:10:325:0:0:0,-3.0103,-10 0/0:58.1019:16:16:585:0:0:0,-4.81648,-10 0/0:99:42:42:1542:0:0:0,-10,-10 0/0:24.9886:5:5:180:0:0:0,-1.50515,-10 0/0:18.968:3:3:98:0:0:0,-0.90309,-9.14667 0/0:73.1534:21:21:791:0:0:0,-6.32163,-10 0/1:0.186329:11:0:0:11:408:-10,-3.31133,0 0/0:73.1534:21:21:771:0:0:0,-6.32163,-10 0/0:34.0195:8:8:291:0:0:0,-2.40824,-10 0/0:31.0092:7:7:233:0:0:0,-2.10721,-10 0/0:79.1739:23:23:832:0:0:0,-6.92369,-10 0/0:67.1328:19:19:686:0:0:0,-5.71957,-10 0/0:73.1534:21:21:749:0:0:0,-6.32163,-10 0/0:99:34:34:1221:0:0:0,-10,-10 0/0:85.1943:25:25:927:0:0:0,-7.52575,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:99:36:36:1301:0:0:0,-10,-10 0/0:99:39:39:1417:0:0:0,-10,-10 0/0:37.0298:9:9:315:0:0:0,-2.70927,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/1:99:34:13:489:21:774:-10,0,-10 0/0:37.0298:9:9:309:0:0:0,-2.70927,-10 0/0:99:47:47:1746:0:0:0,-10,-10 0/0:52.0813:14:14:520:0:0:0,-4.21442,-10 0/0:99:47:47:1694:0:0:0,-10,-10 0/0:61.1122:17:17:635:0:0:0,-5.11751,-10 0/0:34.0195:8:8:304:0:0:0,-2.40824,-10 0/0:99:53:53:1887:0:0:0,-10,-10 0/0:79.1739:23:23:836:0:0:0,-6.92369,-10 0/0:99:30:30:996:0:0:0,-9.0309,-10 0/0:31.0092:7:7:238:0:0:0,-2.10721,-10 0/0:94.2234:28:28:1048:0:0:0,-8.42884,-10 0/0:52.0813:14:14:523:0:0:0,-4.21442,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:85.1943:25:25:902:0:0:0,-7.52575,-10 0/0:99:47:47:1716:0:0:0,-10,-10 0/0:73.1534:21:21:729:0:0:0,-6.32163,-10 0/0:70.1431:20:20:755:0:0:0,-6.0206,-10 0/0:91.2141:27:27:971:0:0:0,-8.12781,-10 0/0:64.1225:18:18:668:0:0:0,-5.41854,-10 0/0:46.0607:12:12:430:0:0:0,-3.61236,-10 0/0:99:43:43:1500:0:0:0,-10,-10 0/0:37.0298:9:9:342:0:0:0,-2.70927,-10 0/0:91.2141:27:27:946:0:0:0,-8.12781,-10 0/0:99:38:38:1397:0:0:0,-10,-10 0/0:91.2141:27:27:1019:0:0:0,-8.12781,-10 0/0:67.1328:19:19:692:0:0:0,-5.71957,-10 0/0:99:36:36:1335:0:0:0,-10,-10 0/0:21.9783:4:4:148:0:0:0,-1.20412,-10 0/0:43.0504:11:11:410:0:0:0,-3.31133,-10 0/0:52.0813:14:14:505:0:0:0,-4.21442,-10 0/0:31.0092:7:7:266:0:0:0,-2.10721,-10 0/0:58.1019:16:16:549:0:0:0,-4.81648,-10 0/0:99:43:43:1554:0:0:0,-10,-10 0/0:97.2317:29:29:1022:0:0:0,-8.72987,-10 0/0:82.1841:24:24:836:0:0:0,-7.22472,-10 0/0:82.1841:24:24:890:0:0:0,-7.22472,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:34.0195:8:8:282:0:0:0,-2.40824,-10 0/0:73.1534:21:21:789:0:0:0,-6.32163,-10 0/0:46.0607:12:12:396:0:0:0,-3.61236,-10 0/0:24.9886:5:5:176:0:0:0,-1.50515,-10 0/0:58.1019:16:16:574:0:0:0,-4.81648,-10 0/0:37.0298:9:9:313:0:0:0,-2.70927,-10 0/0:49.071:13:13:481:0:0:0,-3.91339,-10 scaffold_56 2313964 . A G 396.337 . AB=0.421053;ABP=5.06748;AC=1;AF=0.00543478;AN=184;AO=16;CIGAR=1X;DP=2005;DPB=2005;DPRA=1.75801;EPP=5.18177;EPPR=3.22439;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.9955;NS=92;NUMALT=1;ODDS=7.79038;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=587;QR=73070;RO=1988;RPP=37.7539;RPPR=4319.9;RUN=1;SAF=6;SAP=5.18177;SAR=10;SRF=987;SRP=3.22439;SRR=1001;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.9945:18:18:678:0:0:0,-5.41854,-10 0/0:45.8812:7:7:252:0:0:0,-2.10721,-10 0/0:91.0356:22:22:809:0:0:0,-6.62266,-10 0/0:66.9533:14:14:523:0:0:0,-4.21442,-10 0/0:63.943:13:13:470:0:0:0,-3.91339,-10 0/0:45.8812:7:7:264:0:0:0,-2.10721,-10 0/1:99:38:21:795:16:587:-10,0,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:85.015:20:20:754:0:0:0,-6.0206,-10 0/0:33.84:3:3:110:0:0:0,-0.90309,-10 0/0:48.8915:8:8:303:0:0:0,-2.40824,-10 0/0:39.8606:5:5:187:0:0:0,-1.50515,-10 0/0:99:45:45:1635:0:0:0,-10,-10 0/0:99:45:45:1611:0:0:0,-10,-10 0/0:99:33:33:1227:0:0:0,-9.93399,-10 0/0:94.0458:23:23:869:0:0:0,-6.92369,-10 0/0:97.051:24:24:901:0:0:0,-7.22472,-10 0/0:63.943:13:13:468:0:0:0,-3.91339,-10 0/0:85.015:20:20:727:0:0:0,-6.0206,-10 0/0:99:37:37:1398:0:0:0,-10,-10 0/0:72.9738:16:16:603:0:0:0,-4.81648,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:60.9327:12:12:438:0:0:0,-3.61236,-10 0/0:99:27:27:1009:0:0:0,-8.12781,-10 0/0:63.943:13:13:489:0:0:0,-3.91339,-10 0/0:99:27:27:1020:0:0:0,-8.12781,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:54.9121:10:10:369:0:0:0,-3.0103,-10 0/0:72.9738:16:16:573:0:0:0,-4.81648,-10 0/0:99:42:42:1552:0:0:0,-10,-10 0/0:39.8606:5:5:185:0:0:0,-1.50515,-10 0/0:33.84:3:3:113:0:0:0,-0.90309,-10 0/0:88.0253:21:21:769:0:0:0,-6.32163,-10 0/0:57.9224:11:11:408:0:0:0,-3.31133,-10 0/0:88.0253:21:21:781:0:0:0,-6.32163,-10 0/0:48.8915:8:8:289:0:0:0,-2.40824,-10 0/0:45.8812:7:7:240:0:0:0,-2.10721,-10 0/0:94.0458:23:23:836:0:0:0,-6.92369,-10 0/0:82.0046:19:19:710:0:0:0,-5.71957,-10 0/0:88.0253:21:21:771:0:0:0,-6.32163,-10 0/0:99:34:34:1274:0:0:0,-10,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:99:39:39:1456:0:0:0,-10,-10 0/0:51.9018:9:9:330:0:0:0,-2.70927,-10 0/0:99:35:35:1278:0:0:0,-10,-10 0/0:99:34:34:1280:0:0:0,-10,-10 0/0:51.9018:9:9:327:0:0:0,-2.70927,-10 0/0:99:47:47:1681:0:0:0,-10,-10 0/0:66.9533:14:14:516:0:0:0,-4.21442,-10 0/0:99:47:47:1767:0:0:0,-10,-10 0/0:75.9842:17:17:642:0:0:0,-5.11751,-10 0/0:48.8915:8:8:304:0:0:0,-2.40824,-10 0/0:99:53:53:1904:0:0:0,-10,-10 0/0:94.0458:23:23:827:0:0:0,-6.92369,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:45.8812:7:7:242:0:0:0,-2.10721,-10 0/0:99:28:28:1059:0:0:0,-8.42884,-10 0/0:66.9533:14:14:494:0:0:0,-4.21442,-10 0/0:99:31:31:1110:0:0:0,-9.33193,-10 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:99:47:47:1725:0:0:0,-10,-10 0/0:88.0253:21:21:742:0:0:0,-6.32163,-10 0/0:85.015:20:20:750:0:0:0,-6.0206,-10 0/0:99:27:27:978:0:0:0,-8.12781,-10 0/0:78.9945:18:18:684:0:0:0,-5.41854,-10 0/0:60.9327:12:12:409:0:0:0,-3.61236,-10 0/0:99:43:43:1527:0:0:0,-10,-10 0/0:51.9018:9:9:341:0:0:0,-2.70927,-10 0/0:99:27:27:966:0:0:0,-8.12781,-10 0/0:99:38:38:1381:0:0:0,-10,-10 0/0:99:27:27:984:0:0:0,-8.12781,-10 0/0:82.0046:19:19:697:0:0:0,-5.71957,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:36.8503:4:4:130:0:0:0,-1.20412,-10 0/0:57.9224:11:11:418:0:0:0,-3.31133,-10 0/0:63.943:13:13:491:0:0:0,-3.91339,-10 0/0:45.8812:7:7:262:0:0:0,-2.10721,-10 0/0:72.9738:16:16:583:0:0:0,-4.81648,-10 0/0:99:43:43:1565:0:0:0,-10,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:97.051:24:24:841:0:0:0,-7.22472,-10 0/0:97.051:24:24:906:0:0:0,-7.22472,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/0:48.8915:8:8:300:0:0:0,-2.40824,-10 0/0:88.0253:21:21:785:0:0:0,-6.32163,-10 0/0:60.9327:12:12:438:0:0:0,-3.61236,-10 0/0:39.8606:5:5:181:0:0:0,-1.50515,-10 0/0:72.9738:16:16:579:0:0:0,-4.81648,-10 0/0:51.9018:9:9:326:0:0:0,-2.70927,-10 0/0:63.943:13:13:485:0:0:0,-3.91339,-10 scaffold_56 2434880 . C T 3920.59 . AB=0.69697;ABP=25.2514;AC=11;AF=0.0597826;AN=184;AO=148;CIGAR=1X;DP=2490;DPB=2490;DPRA=1.07248;EPP=4.47751;EPPR=3.27837;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9829;NS=92;NUMALT=1;ODDS=0.976459;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5365;QR=84816;RO=2341;RPP=324.388;RPPR=5077.75;RUN=1;SAF=69;SAP=4.47751;SAR=79;SRF=1163;SRP=3.21901;SRR=1178;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:82.3149:24:24:880:0:0:0,-7.22472,-10 0/0:40.1707:10:10:364:0:0:0,-3.0103,-10 0/0:91.3441:27:27:972:0:0:0,-8.12781,-10 0/0:64.2531:18:18:641:0:0:0,-5.41854,-10 0/0:97.3649:29:29:1071:0:0:0,-8.72987,-10 0/0:34.1501:8:8:265:0:0:0,-2.40824,-10 0/0:99:58:58:2099:0:0:0,-10,-10 0/0:99:48:48:1722:0:0:0,-10,-10 0/0:46.1913:12:12:443:0:0:0,-3.61236,-10 0/0:19.0986:3:3:110:0:0:0,-0.90309,-10 0/0:49.2016:13:13:494:0:0:0,-3.91339,-10 0/0:52.2119:14:14:532:0:0:0,-4.21442,-10 0/0:99:53:53:1901:0:0:0,-10,-10 0/0:99:53:53:1949:0:0:0,-10,-10 0/0:99:43:42:1503:1:16:0,-9.71082,-10 0/0:94.3527:28:28:1008:0:0:0,-8.42884,-10 0/0:97.3649:29:29:1089:0:0:0,-8.72987,-10 0/0:49.2016:14:13:480:0:0:0,-3.91339,-10 0/0:99:34:34:1231:0:0:0,-10,-10 0/0:99:40:40:1482:0:0:0,-10,-10 0/0:99:33:33:1193:0:0:0,-9.93399,-10 0/0:99:40:40:1455:0:0:0,-10,-10 0/0:52.2119:14:14:505:0:0:0,-4.21442,-10 0/0:94.3527:28:28:1035:0:0:0,-8.42884,-10 0/0:99:33:33:1193:0:0:0,-9.93399,-10 0/0:94.3527:28:28:1037:0:0:0,-8.42884,-10 0/0:99:31:31:1098:0:0:0,-9.33193,-10 0/0:88.3347:26:26:934:0:0:0,-7.82678,-10 0/0:88.3347:26:26:936:0:0:0,-7.82678,-10 0/0:99:45:44:1614:1:16:0,-10,-10 0/0:28.1295:6:6:218:0:0:0,-1.80618,-10 0/0:22.1089:4:4:152:0:0:0,-1.20412,-10 0/0:99:36:36:1298:0:0:0,-10,-10 0/0:43.181:11:11:413:0:0:0,-3.31133,-10 0/0:70.2737:20:20:745:0:0:0,-6.0206,-10 0/0:40.1707:10:10:338:0:0:0,-3.0103,-10 0/0:40.1707:10:10:376:0:0:0,-3.0103,-10 0/0:99:42:42:1505:0:0:0,-10,-10 0/0:91.3441:27:27:923:0:0:0,-8.12781,-10 0/1:99:16:6:227:10:371:-10,0,-10 0/0:99:38:38:1404:0:0:0,-10,-10 0/0:85.3251:25:25:903:0:0:0,-7.52575,-10 0/0:76.2943:22:22:779:0:0:0,-6.62266,-10 0/0:99:43:43:1557:0:0:0,-10,-10 0/0:99:45:45:1606:0:0:0,-10,-10 0/0:67.2634:19:19:625:0:0:0,-5.71957,-10 0/0:99:45:45:1651:0:0:0,-10,-10 0/0:99:32:32:1167:0:0:0,-9.63296,-10 0/0:58.2325:16:16:568:0:0:0,-4.81648,-10 0/0:99:49:49:1765:0:0:0,-10,-10 0/0:79.3046:23:23:851:0:0:0,-6.92369,-10 0/0:99:46:46:1612:0:0:0,-10,-10 0/0:64.2531:18:18:648:0:0:0,-5.41854,-10 0/0:55.2222:15:15:525:0:0:0,-4.51545,-10 0/0:99:39:39:1398:0:0:0,-10,-10 0/0:55.2222:15:15:567:0:0:0,-4.51545,-10 0/0:85.7959:35:34:1215:1:16:0,-7.39198,-10 0/0:46.1913:12:12:420:0:0:0,-3.61236,-10 0/0:67.2634:19:19:671:0:0:0,-5.71957,-10 0/0:64.2531:18:18:653:0:0:0,-5.41854,-10 0/0:99:39:39:1414:0:0:0,-10,-10 0/0:99:36:36:1246:0:0:0,-10,-10 0/0:99:49:49:1813:0:0:0,-10,-10 0/0:88.3347:26:26:914:0:0:0,-7.82678,-10 0/0:61.2428:17:17:627:0:0:0,-5.11751,-10 0/0:99:42:42:1523:0:0:0,-10,-10 0/0:85.3251:25:25:870:0:0:0,-7.52575,-10 0/0:46.1913:12:12:427:0:0:0,-3.61236,-10 0/0:99:60:60:2204:0:0:0,-10,-10 0/0:61.2428:17:17:617:0:0:0,-5.11751,-10 1/1:6.2873:18:0:0:18:679:-10,-5.41854,0 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:99:36:36:1324:0:0:0,-10,-10 1/1:42.4109:30:0:0:30:1103:-10,-9.0309,0 1/1:48.4315:32:0:0:32:1170:-10,-9.63296,0 0/0:70.2737:20:20:750:0:0:0,-6.0206,-10 0/0:91.3441:27:27:998:0:0:0,-8.12781,-10 1/1:9.2976:19:0:0:19:691:-10,-5.71957,0 0/1:0.00246462:10:0:0:10:354:-10,-3.0103,0 0/0:67.2634:19:19:685:0:0:0,-5.71957,-10 0/1:99:40:14:507:26:949:-10,0,-10 0/0:99:47:47:1738:0:0:0,-10,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:91.3441:27:27:980:0:0:0,-8.12781,-10 0/0:67.2634:19:19:711:0:0:0,-5.71957,-10 0/0:28.1295:6:6:228:0:0:0,-1.80618,-10 0/0:88.3347:26:26:951:0:0:0,-7.82678,-10 0/0:94.3527:28:28:1045:0:0:0,-8.42884,-10 0/0:40.1707:10:10:349:0:0:0,-3.0103,-10 0/0:76.2943:22:22:760:0:0:0,-6.62266,-10 0/0:85.3251:25:25:925:0:0:0,-7.52575,-10 0/0:76.2943:22:22:780:0:0:0,-6.62266,-10 scaffold_56 2434890 . T C 1782.67 . AB=0.510417;ABP=3.10078;AC=5;AF=0.0271739;AN=184;AO=70;CIGAR=1X;DP=2490;DPB=2490;DPRA=1.38913;EPP=4.99565;EPPR=3.92914;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9835;NS=92;NUMALT=1;ODDS=0.969885;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2510;QR=88424;RO=2420;RPP=155.013;RPPR=5257.97;RUN=1;SAF=39;SAP=4.99565;SAR=31;SRF=1194;SRP=3.92914;SRR=1226;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:95.1542:24:24:858:0:0:0,-7.22472,-10 0/0:53.0128:10:10:369:0:0:0,-3.0103,-10 0/0:99:27:27:953:0:0:0,-8.12781,-10 0/0:77.0952:18:18:660:0:0:0,-5.41854,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:46.9922:8:8:291:0:0:0,-2.40824,-10 0/0:99:58:58:2070:0:0:0,-10,-10 0/0:99:48:48:1797:0:0:0,-10,-10 0/0:59.0334:12:12:436:0:0:0,-3.61236,-10 0/0:31.9407:3:3:114:0:0:0,-0.90309,-10 0/0:62.0437:13:13:489:0:0:0,-3.91339,-10 0/0:65.054:14:14:531:0:0:0,-4.21442,-10 0/0:99:53:53:1921:0:0:0,-10,-10 0/0:99:53:53:1895:0:0:0,-10,-10 0/0:99:43:43:1574:0:0:0,-10,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:99:29:29:1069:0:0:0,-8.72987,-10 0/0:65.054:14:14:522:0:0:0,-4.21442,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:99:40:40:1500:0:0:0,-10,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:99:40:40:1483:0:0:0,-10,-10 0/0:65.054:14:14:522:0:0:0,-4.21442,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:99:33:33:1220:0:0:0,-9.93399,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:99:31:31:1117:0:0:0,-9.33193,-10 0/0:99:26:26:954:0:0:0,-7.82678,-10 0/0:99:26:26:937:0:0:0,-7.82678,-10 0/0:99:45:45:1652:0:0:0,-10,-10 0/0:40.9716:6:6:205:0:0:0,-1.80618,-10 0/0:34.951:4:4:152:0:0:0,-1.20412,-10 0/0:99:36:36:1309:0:0:0,-10,-10 0/0:56.0231:11:11:418:0:0:0,-3.31133,-10 0/0:83.1158:20:20:723:0:0:0,-6.0206,-10 0/0:53.0128:10:10:375:0:0:0,-3.0103,-10 0/0:53.0128:10:10:347:0:0:0,-3.0103,-10 0/0:99:42:42:1468:0:0:0,-10,-10 0/0:99:27:27:931:0:0:0,-8.12781,-10 0/0:71.0745:16:16:595:0:0:0,-4.81648,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/0:98.1683:25:25:919:0:0:0,-7.52575,-10 0/0:89.1365:22:22:797:0:0:0,-6.62266,-10 0/0:99:43:43:1588:0:0:0,-10,-10 0/0:99:45:44:1623:1:16:0,-10,-10 0/0:80.1054:19:19:675:0:0:0,-5.71957,-10 0/0:99:45:45:1678:0:0:0,-10,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:71.0745:16:16:562:0:0:0,-4.81648,-10 0/0:99:49:49:1823:0:0:0,-10,-10 0/0:92.1469:23:23:868:0:0:0,-6.92369,-10 0/0:99:46:46:1661:0:0:0,-10,-10 0/0:77.0952:18:18:664:0:0:0,-5.41854,-10 0/0:68.0643:15:15:536:0:0:0,-4.51545,-10 0/0:99:39:39:1424:0:0:0,-10,-10 0/0:68.0643:15:15:563:0:0:0,-4.51545,-10 0/0:99:35:35:1239:0:0:0,-10,-10 0/0:59.0334:12:12:425:0:0:0,-3.61236,-10 1/1:5.6133:19:0:0:19:700:-10,-5.71957,0 0/0:77.0952:18:18:675:0:0:0,-5.41854,-10 0/0:99:39:39:1446:0:0:0,-10,-10 0/0:99:36:36:1284:0:0:0,-10,-10 0/1:99:49:26:963:23:838:-10,0,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:74.0848:17:17:637:0:0:0,-5.11751,-10 0/0:99:42:42:1531:0:0:0,-10,-10 0/1:99:25:13:481:12:409:-10,0,-10 0/0:59.0334:12:12:448:0:0:0,-3.61236,-10 0/0:99:60:59:2185:1:38:0,-10,-10 0/0:74.0848:17:17:622:0:0:0,-5.11751,-10 0/0:77.0952:18:18:671:0:0:0,-5.41854,-10 0/0:99:33:33:1232:0:0:0,-9.93399,-10 0/0:99:36:36:1302:0:0:0,-10,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/0:99:32:32:1182:0:0:0,-9.63296,-10 0/0:83.1158:20:20:733:0:0:0,-6.0206,-10 0/0:99:27:27:1014:0:0:0,-8.12781,-10 0/0:80.1054:19:19:696:0:0:0,-5.71957,-10 0/0:53.0128:10:10:379:0:0:0,-3.0103,-10 0/0:80.1054:19:19:687:0:0:0,-5.71957,-10 0/0:99:40:40:1427:0:0:0,-10,-10 0/0:99:47:47:1757:0:0:0,-10,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:99:27:27:964:0:0:0,-8.12781,-10 0/0:80.1054:19:19:673:0:0:0,-5.71957,-10 0/0:40.9716:6:6:219:0:0:0,-1.80618,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:99:28:28:984:0:0:0,-8.42884,-10 0/0:53.0128:10:10:358:0:0:0,-3.0103,-10 0/1:99:22:8:273:14:509:-10,0,-10 0/0:98.1683:25:25:864:0:0:0,-7.52575,-10 0/0:89.1365:22:22:784:0:0:0,-6.62266,-10 scaffold_56 2513675 . T G 187.764 . AB=0.428571;ABP=3.94093;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1803;DPB=1803;DPRA=1.57691;EPP=3.20771;EPPR=4.58249;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9955;NS=92;NUMALT=1;ODDS=10.8643;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=347;QR=66149;RO=1790;RPP=26.8965;RPPR=3889.95;RUN=1;SAF=5;SAP=3.20771;SAR=6;SRF=913;SRP=4.58249;SRR=877;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:92.3362:17:17:643:0:0:0,-5.11751,-10 0/0:71.2658:10:10:368:0:0:0,-3.0103,-10 0/0:99:24:24:819:0:0:0,-7.22472,-10 0/0:74.2761:11:11:405:0:0:0,-3.31133,-10 0/0:71.2658:10:10:380:0:0:0,-3.0103,-10 0/0:59.2246:6:6:228:0:0:0,-1.80618,-10 0/0:99:30:30:1100:0:0:0,-9.0309,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:68.2555:9:9:337:0:0:0,-2.70927,-10 0/0:47.1834:2:2:75:0:0:0,-0.60206,-7.125 0/0:56.2143:5:5:187:0:0:0,-1.50515,-10 0/0:53.204:4:4:152:0:0:0,-1.20412,-10 0/0:99:27:27:1020:0:0:0,-8.12781,-10 0/0:99:25:25:948:0:0:0,-7.52575,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:99:30:30:1099:0:0:0,-9.0309,-10 0/0:99:21:21:787:0:0:0,-6.32163,-10 0/0:77.2864:12:12:444:0:0:0,-3.61236,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:99:26:26:937:0:0:0,-7.82678,-10 0/0:71.2658:10:10:380:0:0:0,-3.0103,-10 0/0:99:37:37:1318:0:0:0,-10,-10 0/0:53.204:5:4:152:0:0:0,-1.20412,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:99:24:24:908:0:0:0,-7.22472,-10 0/0:99:23:23:861:0:0:0,-6.92369,-10 0/0:99:30:30:1110:0:0:0,-9.0309,-10 0/0:77.2864:12:12:415:0:0:0,-3.61236,-10 0/0:71.2658:10:10:376:0:0:0,-3.0103,-10 0/0:99:32:32:1179:0:0:0,-9.63296,-10 0/0:59.2246:6:6:227:0:0:0,-1.80618,-10 0/0:53.204:4:4:148:0:0:0,-1.20412,-10 0/0:99:23:23:837:0:0:0,-6.92369,-10 0/0:65.2452:8:8:304:0:0:0,-2.40824,-10 0/0:99:25:25:935:0:0:0,-7.52575,-10 0/0:86.3169:15:15:564:0:0:0,-4.51545,-10 0/0:71.2658:10:10:379:0:0:0,-3.0103,-10 0/0:99:39:39:1415:0:0:0,-10,-10 0/0:71.2658:10:10:377:0:0:0,-3.0103,-10 0/0:74.2761:11:11:405:0:0:0,-3.31133,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/0:98.3585:19:19:697:0:0:0,-5.71957,-10 0/0:99:20:20:752:0:0:0,-6.0206,-10 0/0:99:38:38:1384:0:0:0,-10,-10 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:62.2349:7:7:266:0:0:0,-2.10721,-10 0/0:99:48:48:1784:0:0:0,-10,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:99:21:21:777:0:0:0,-6.32163,-10 0/0:99:38:36:1354:1:14:0,-8.31991,-10 0/0:62.2349:7:7:264:0:0:0,-2.10721,-10 0/0:99:39:39:1448:0:0:0,-10,-10 0/0:99:22:22:818:0:0:0,-6.62266,-10 0/0:53.204:4:4:149:0:0:0,-1.20412,-10 0/0:99:39:39:1464:0:0:0,-10,-10 0/0:86.3169:15:15:561:0:0:0,-4.51545,-10 0/0:95.3482:18:18:657:0:0:0,-5.41854,-10 0/0:62.2349:7:7:262:0:0:0,-2.10721,-10 0/0:95.3482:18:18:650:0:0:0,-5.41854,-10 0/0:80.2966:13:13:469:0:0:0,-3.91339,-10 0/0:99:25:25:933:0:0:0,-7.52575,-10 0/0:95.3482:18:18:669:0:0:0,-5.41854,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:71.2658:10:10:377:0:0:0,-3.0103,-10 0/0:62.2349:7:7:262:0:0:0,-2.10721,-10 0/0:99:22:22:780:0:0:0,-6.62266,-10 0/0:99:20:20:753:0:0:0,-6.0206,-10 0/0:95.3482:18:18:632:0:0:0,-5.41854,-10 0/0:99:32:31:1166:1:14:0,-6.72781,-10 0/0:99:21:21:731:0:0:0,-6.32163,-10 0/0:80.2966:13:13:494:0:0:0,-3.91339,-10 0/0:99:35:35:1323:0:0:0,-10,-10 0/0:99:31:31:1164:0:0:0,-9.33193,-10 0/0:89.3276:16:16:584:0:0:0,-4.81648,-10 0/0:98.3585:19:19:709:0:0:0,-5.71957,-10 0/0:80.2966:13:13:478:0:0:0,-3.91339,-10 0/0:98.3585:19:19:714:0:0:0,-5.71957,-10 0/0:99:28:28:1060:0:0:0,-8.42884,-10 0/0:62.2349:7:7:265:0:0:0,-2.10721,-10 0/0:77.2864:12:12:456:0:0:0,-3.61236,-10 0/0:99:38:38:1338:0:0:0,-10,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:98.3585:19:19:709:0:0:0,-5.71957,-10 0/1:99:21:12:430:9:319:-10,0,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:56.2143:5:5:190:0:0:0,-1.50515,-10 0/0:99:24:24:866:0:0:0,-7.22472,-10 0/0:71.2658:10:10:366:0:0:0,-3.0103,-10 0/0:59.2246:6:6:228:0:0:0,-1.80618,-10 0/0:98.3585:19:19:685:0:0:0,-5.71957,-10 0/0:86.3169:15:15:566:0:0:0,-4.51545,-10 0/0:92.3362:17:17:608:0:0:0,-5.11751,-10 scaffold_56 2666606 . C T 1153.13 . AB=0.647059;ABP=15.7837;AC=3;AF=0.0163043;AN=184;AO=46;CIGAR=1X;DP=1918;DPB=1918;DPRA=1.43363;EPP=6.03148;EPPR=6.2739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9813;NS=92;NUMALT=1;ODDS=4.59695;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1646;QR=68104;RO=1869;RPP=86.2815;RPPR=2435.67;RUN=1;SAF=29;SAP=9.80795;SAR=17;SRF=926;SRP=3.34607;SRR=943;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.1504:10:10:347:0:0:0,-3.0103,-10 0/0:47.171:12:12:433:0:0:0,-3.61236,-10 0/0:99:31:31:1125:0:0:0,-9.33193,-10 0/0:59.2122:16:16:601:0:0:0,-4.81648,-10 0/0:80.2842:23:23:843:0:0:0,-6.92369,-10 0/0:26.0989:5:5:183:0:0:0,-1.50515,-10 0/0:92.0467:42:41:1459:1:16:0,-9.42001,-10 0/0:65.2328:18:18:613:0:0:0,-5.41854,-10 0/0:47.171:13:12:432:0:0:0,-3.61236,-10 0/0:23.0886:4:4:130:0:0:0,-1.20412,-10 0/0:38.1401:9:9:338:0:0:0,-2.70927,-10 0/0:38.1401:9:9:341:0:0:0,-2.70927,-10 0/1:99:33:13:447:20:739:-10,0,-10 0/0:98.343:29:29:1049:0:0:0,-8.72987,-10 0/0:99:32:32:1195:0:0:0,-9.63296,-10 0/0:74.6543:36:35:1249:1:16:0,-7.68078,-10 0/0:86.3049:25:25:907:0:0:0,-7.52575,-10 0/0:35.1298:8:8:281:0:0:0,-2.40824,-10 0/0:65.2328:18:18:669:0:0:0,-5.41854,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:65.2328:18:18:670:0:0:0,-5.41854,-10 0/0:99:37:37:1326:0:0:0,-10,-10 0/0:50.1813:13:13:457:0:0:0,-3.91339,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:80.2842:23:23:839:0:0:0,-6.92369,-10 0/0:95.336:28:28:1024:0:0:0,-8.42884,-10 0/0:86.3049:25:25:930:0:0:0,-7.52575,-10 0/0:41.1504:10:10:380:0:0:0,-3.0103,-10 0/0:77.274:22:22:818:0:0:0,-6.62266,-10 0/0:99:35:35:1289:0:0:0,-10,-10 0/0:23.0886:4:4:135:0:0:0,-1.20412,-10 0/0:56.2019:15:15:562:0:0:0,-4.51545,-10 0/0:56.2019:15:15:535:0:0:0,-4.51545,-10 0/0:44.1607:11:11:403:0:0:0,-3.31133,-10 0/0:99:33:33:1240:0:0:0,-9.93399,-10 0/0:35.1298:8:8:297:0:0:0,-2.40824,-10 0/0:65.2328:18:18:619:0:0:0,-5.41854,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:74.2637:21:21:786:0:0:0,-6.32163,-10 0/0:47.171:12:12:447:0:0:0,-3.61236,-10 0/0:98.343:29:29:1070:0:0:0,-8.72987,-10 0/0:59.2122:16:16:582:0:0:0,-4.81648,-10 0/0:83.2946:24:24:882:0:0:0,-7.22472,-10 0/0:83.2946:24:24:839:0:0:0,-7.22472,-10 0/1:99:18:6:225:12:443:-10,0,-10 0/0:80.2842:23:23:865:0:0:0,-6.92369,-10 0/0:99:46:46:1690:0:0:0,-10,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:47.171:12:12:434:0:0:0,-3.61236,-10 0/0:99:39:39:1406:0:0:0,-10,-10 0/0:32.1195:7:7:266:0:0:0,-2.10721,-10 0/0:99:37:37:1394:0:0:0,-10,-10 0/0:38.1401:9:9:315:0:0:0,-2.70927,-10 0/0:29.1092:6:6:223:0:0:0,-1.80618,-10 0/0:99:41:41:1511:0:0:0,-10,-10 0/0:53.1916:14:14:522:0:0:0,-4.21442,-10 0/0:62.2225:17:17:646:0:0:0,-5.11751,-10 0/0:41.1504:10:10:370:0:0:0,-3.0103,-10 0/0:74.2637:21:21:768:0:0:0,-6.32163,-10 0/0:44.1607:11:11:394:0:0:0,-3.31133,-10 0/0:99:45:45:1673:0:0:0,-10,-10 0/0:83.2946:24:24:864:0:0:0,-7.22472,-10 0/0:83.2946:24:24:889:0:0:0,-7.22472,-10 0/0:98.343:30:29:1012:0:0:0,-8.72987,-10 0/0:53.1916:14:14:532:0:0:0,-4.21442,-10 0/0:99:33:33:1225:0:0:0,-9.93399,-10 0/0:53.1916:14:14:459:0:0:0,-4.21442,-10 0/0:47.171:12:12:453:0:0:0,-3.61236,-10 0/0:99:40:40:1488:0:0:0,-10,-10 0/0:50.1813:14:13:455:0:0:0,-3.91339,-10 0/0:65.2328:18:18:680:0:0:0,-5.41854,-10 0/0:95.336:28:28:1004:0:0:0,-8.42884,-10 0/0:80.2842:23:23:833:0:0:0,-6.92369,-10 0/0:50.1813:13:13:487:0:0:0,-3.91339,-10 0/0:95.336:28:28:1054:0:0:0,-8.42884,-10 0/0:44.1607:11:11:407:0:0:0,-3.31133,-10 0/0:65.2328:18:18:620:0:0:0,-5.41854,-10 0/0:77.274:22:22:786:0:0:0,-6.62266,-10 0/0:20.0783:3:3:69:0:0:0,-0.90309,-6.44 0/0:86.3049:25:25:881:0:0:0,-7.52575,-10 0/0:95.336:28:28:1001:0:0:0,-8.42884,-10 0/0:86.3049:25:25:925:0:0:0,-7.52575,-10 0/1:99:17:5:186:12:432:-10,0,-10 0/0:50.1813:13:13:449:0:0:0,-3.91339,-10 0/0:83.2946:24:24:860:0:0:0,-7.22472,-10 0/0:41.1504:10:10:374:0:0:0,-3.0103,-10 0/0:77.274:22:22:770:0:0:0,-6.62266,-10 0/0:50.1813:13:13:487:0:0:0,-3.91339,-10 0/0:35.1298:8:8:304:0:0:0,-2.40824,-10 0/0:80.2842:23:23:842:0:0:0,-6.92369,-10 0/0:83.2946:24:24:844:0:0:0,-7.22472,-10 0/0:74.2637:21:21:740:0:0:0,-6.32163,-10 scaffold_56 2707793 . A G 22949.9 . AB=0.492443;ABP=3.40412;AC=69;AF=0.375;AN=184;AO=811;CIGAR=1X;DP=2341;DPB=2341;DPRA=1.07711;EPP=7.08281;EPPR=6.55846;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.922051;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=29421;QR=55926;RO=1530;RPP=1764.07;RPPR=3325.36;RUN=1;SAF=386;SAP=7.08281;SAR=425;SRF=790;SRP=6.55846;SRR=740;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:25.4358:13:0:0:13:468:-10,-3.91339,0 1/1:28.4461:14:0:0:14:506:-10,-4.21442,0 0/1:99:26:13:476:13:466:-10,0,-10 0/0:77.9739:23:23:798:0:0:0,-6.92369,-10 0/0:65.9327:19:19:698:0:0:0,-5.71957,-10 1/1:31.4564:15:0:0:15:546:-10,-4.51545,0 0/0:99:52:52:1882:0:0:0,-10,-10 0/1:99:27:17:614:10:366:-10,0,-10 0/0:74.9636:22:22:819:0:0:0,-6.62266,-10 0/0:29.8091:7:7:257:0:0:0,-2.10721,-10 1/1:10.3843:8:0:0:8:300:-10,-2.40824,0 1/1:13.3946:9:0:0:9:338:-10,-2.70927,0 0/0:75.2356:39:38:1391:1:38:0,-6.34911,-10 0/0:99:55:55:2032:0:0:0,-10,-10 1/1:63.1055:35:1:16:34:1219:-10,-7.39198,0 0/0:96.0364:29:29:1096:0:0:0,-8.72987,-10 1/1:64.5697:26:0:0:26:961:-10,-7.82678,0 0/0:53.8915:15:15:529:0:0:0,-4.51545,-10 0/1:99:26:11:414:15:566:-10,0,-10 0/0:99:49:49:1773:0:0:0,-10,-10 0/1:99:22:8:297:14:499:-10,0,-10 0/0:99:35:35:1269:0:0:0,-10,-10 0/0:50.8812:14:14:519:0:0:0,-4.21442,-10 0/1:99:27:15:548:12:442:-10,0,-10 1/1:55.5388:23:0:0:23:829:-10,-6.92369,0 0/0:77.9739:23:23:855:0:0:0,-6.92369,-10 0/0:90.0153:27:27:996:0:0:0,-8.12781,-10 0/0:47.8709:13:13:467:0:0:0,-3.91339,-10 0/0:62.8934:27:26:944:1:15:0,-5.19645,-10 0/1:99:43:20:756:23:817:-10,0,-10 1/1:10.3843:8:0:0:8:288:-10,-2.40824,0 0/0:0.735183:12:11:416:1:29:-0.366821,0,-10 0/0:83.9943:25:25:922:0:0:0,-7.52575,-10 0/0:41.8503:11:11:403:0:0:0,-3.31133,-10 0/0:99:31:31:1122:0:0:0,-9.33193,-10 0/0:26.7988:6:6:220:0:0:0,-1.80618,-10 1/1:28.4461:14:0:0:14:525:-10,-4.21442,0 0/0:99:45:45:1632:0:0:0,-10,-10 0/0:99:32:32:1098:0:0:0,-9.63296,-10 0/1:99:26:14:510:12:427:-10,0,-10 0/0:99:32:32:1195:0:0:0,-9.63296,-10 1/1:55.5388:23:0:0:23:835:-10,-6.92369,0 0/0:80.9841:24:24:867:0:0:0,-7.22472,-10 0/1:99:46:22:832:24:876:-10,0,-10 0/0:77.9739:23:23:835:0:0:0,-6.92369,-10 0/1:99:15:10:380:5:166:-10,0,-10 0/1:99:62:33:1185:29:1075:-10,0,-10 0/1:99:33:20:745:13:459:-10,0,-10 1/1:46.5079:20:0:0:20:722:-10,-6.0206,0 1/1:99:45:0:0:45:1655:-10,-10,0 0/0:53.8915:15:15:523:0:0:0,-4.51545,-10 0/1:99:65:31:1065:34:1222:-10,0,-10 0/0:38.84:10:10:368:0:0:0,-3.0103,-10 0/0:35.8297:9:9:336:0:0:0,-2.70927,-10 0/1:99:33:16:575:17:630:-10,0,-10 0/0:56.9018:16:16:595:0:0:0,-4.81648,-10 0/1:99:24:13:467:11:408:-10,0,-10 0/0:23.7885:5:5:186:0:0:0,-1.50515,-10 0/0:71.9533:21:21:778:0:0:0,-6.32163,-10 0/0:77.9739:23:23:867:0:0:0,-6.92369,-10 0/1:99:31:23:861:8:302:-10,0,-10 1/1:70.5903:28:0:0:28:1027:-10,-8.42884,0 0/1:99:62:23:819:39:1402:-10,0,-10 0/1:99:17:9:321:8:300:-10,0,-10 0/0:59.9121:17:17:629:0:0:0,-5.11751,-10 0/1:99:50:24:897:26:921:-10,0,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 1/1:46.5079:20:0:0:20:714:-10,-6.0206,0 0/1:99:37:13:435:24:870:-10,0,-10 1/1:19.4152:11:0:0:11:414:-10,-3.31133,0 0/0:96.0364:29:29:1097:0:0:0,-8.72987,-10 0/0:99:40:40:1502:0:0:0,-10,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:87.0044:26:26:949:0:0:0,-7.82678,-10 0/0:99:41:41:1489:0:0:0,-10,-10 1/1:25.4358:13:0:0:13:488:-10,-3.91339,0 0/0:71.9533:21:21:776:0:0:0,-6.32163,-10 1/1:31.4564:15:0:0:15:524:-10,-4.51545,0 1/1:10.3843:8:0:0:8:282:-10,-2.40824,0 1/1:19.4152:11:0:0:11:413:-10,-3.31133,0 0/1:99:62:39:1412:23:804:-10,0,-10 1/1:82.6313:32:0:0:32:1164:-10,-9.63296,0 0/0:96.0364:29:29:1064:0:0:0,-8.72987,-10 0/1:99:24:10:378:14:521:-10,0,-10 0/1:99:27:12:428:15:507:-10,0,-10 1/1:10.3843:8:0:0:8:293:-10,-2.40824,0 0/0:56.9018:16:16:602:0:0:0,-4.81648,-10 1/1:43.4976:19:0:0:19:706:-10,-5.71957,0 0/1:56.3196:9:7:266:2:76:-6.06703,0,-10 0/0:77.9739:23:23:815:0:0:0,-6.92369,-10 0/0:65.9327:19:19:691:0:0:0,-5.71957,-10 0/0:56.9018:16:16:600:0:0:0,-4.81648,-10 scaffold_56 2747463 . A G 877.43 . AB=0.538462;ABP=3.84548;AC=4;AF=0.0215054;AN=186;AO=35;CIGAR=1X;DP=1898;DPB=1898;DPRA=0.789007;EPP=3.07234;EPPR=3.23912;GTI=2;LEN=1;MEANALT=1;MQM=59.8857;MQMR=59.943;NS=93;NUMALT=1;ODDS=5.78088;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1301;QR=67803;RO=1860;RPP=79.0118;RPPR=4041.95;RUN=1;SAF=18;SAP=3.07234;SAR=17;SRF=937;SRP=3.23912;SRR=923;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.2515:13:13:478:0:0:0,-3.91339,-10 0/0:58.2412:12:12:420:0:0:0,-3.61236,-10 0/0:88.3434:22:22:825:0:0:0,-6.62266,-10 0/1:8.24346e-06:9:1:15:8:299:-10,-0.255027,0 0/0:55.2309:11:11:413:0:0:0,-3.31133,-10 0/0:46.2:8:8:303:0:0:0,-2.40824,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:99:31:31:1085:0:0:0,-9.33193,-10 0/0:64.2618:14:14:511:0:0:0,-4.21442,-10 0/0:37.1691:5:5:186:0:0:0,-1.50515,-10 0/0:49.2103:9:9:339:0:0:0,-2.70927,-10 0/0:55.2309:11:11:407:0:0:0,-3.31133,-10 0/0:94.3642:24:24:885:0:0:0,-7.22472,-10 0/0:99:31:31:1138:0:0:0,-9.33193,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:99:29:29:1031:0:0:0,-8.72987,-10 0/0:70.2824:16:16:573:0:0:0,-4.81648,-10 0/0:52.2206:10:10:332:0:0:0,-3.0103,-10 0/0:79.3132:19:19:691:0:0:0,-5.71957,-10 0/0:99:53:53:1929:0:0:0,-10,-10 0/0:61.2515:13:13:476:0:0:0,-3.91339,-10 0/0:94.3642:24:24:889:0:0:0,-7.22472,-10 0/0:37.1691:5:5:167:0:0:0,-1.50515,-10 0/0:70.2824:16:16:597:0:0:0,-4.81648,-10 0/0:82.3234:20:20:745:0:0:0,-6.0206,-10 0/0:88.3434:22:22:778:0:0:0,-6.62266,-10 0/0:70.2824:16:16:552:0:0:0,-4.81648,-10 0/0:97.3739:25:25:898:0:0:0,-7.52575,-10 0/0:76.303:18:18:658:0:0:0,-5.41854,-10 0/0:99:42:42:1512:0:0:0,-10,-10 0/0:34.1588:4:4:150:0:0:0,-1.20412,-10 0/0:43.1897:7:7:241:0:0:0,-2.10721,-10 0/0:76.303:18:18:620:0:0:0,-5.41854,-10 0/0:67.2721:15:15:534:0:0:0,-4.51545,-10 0/0:67.2721:15:15:564:0:0:0,-4.51545,-10 0/0:43.1897:7:7:259:0:0:0,-2.10721,-10 0/0:73.2927:17:17:635:0:0:0,-5.11751,-10 0/0:99:27:27:998:0:0:0,-8.12781,-10 0/0:85.3339:22:21:768:0:0:0,-6.32163,-10 0/0:58.2412:12:12:446:0:0:0,-3.61236,-10 0/0:99:39:39:1473:0:0:0,-10,-10 0/0:94.3642:24:24:862:0:0:0,-7.22472,-10 0/0:85.3339:21:21:756:0:0:0,-6.32163,-10 0/1:99:32:22:826:10:374:-10,0,-10 0/0:99:29:29:1059:0:0:0,-8.72987,-10 0/0:79.3132:19:19:700:0:0:0,-5.71957,-10 0/0:99:48:48:1767:0:0:0,-10,-10 0/0:94.3642:24:24:860:0:0:0,-7.22472,-10 0/0:58.2412:12:12:434:0:0:0,-3.61236,-10 0/0:99:36:36:1290:0:0:0,-10,-10 0/0:64.2618:14:14:530:0:0:0,-4.21442,-10 0/0:99:37:37:1324:0:0:0,-10,-10 0/0:73.2927:17:17:622:0:0:0,-5.11751,-10 0/0:31.1485:3:3:69:0:0:0,-0.90309,-6.44 0/0:99:46:45:1603:0:0:0,-10,-10 0/0:43.1897:7:7:263:0:0:0,-2.10721,-10 0/0:99:29:29:1093:0:0:0,-8.72987,-10 0/0:58.2412:12:12:451:0:0:0,-3.61236,-10 0/0:76.303:18:18:666:0:0:0,-5.41854,-10 0/0:55.2309:11:11:411:0:0:0,-3.31133,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:82.3234:20:20:728:0:0:0,-6.0206,-10 0/0:99:45:45:1646:0:0:0,-10,-10 0/0:99:31:31:1062:0:0:0,-9.33193,-10 0/0:67.2721:15:15:570:0:0:0,-4.51545,-10 0/0:94.3642:24:24:849:0:0:0,-7.22472,-10 0/0:76.303:18:18:660:0:0:0,-5.41854,-10 0/0:70.2824:16:16:571:0:0:0,-4.81648,-10 0/0:99:35:34:1270:0:0:0,-10,-10 0/0:55.2309:11:11:366:0:0:0,-3.31133,-10 0/0:99:28:28:978:0:0:0,-8.42884,-10 0/0:99:31:31:1109:0:0:0,-9.33193,-10 0/0:99:31:31:1081:0:0:0,-9.33193,-10 0/0:88.3434:22:22:827:0:0:0,-6.62266,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:73.2927:17:17:642:0:0:0,-5.11751,-10 0/0:73.2927:17:17:628:0:0:0,-5.11751,-10 0/0:88.3434:22:22:830:0:0:0,-6.62266,-10 0/0:43.1897:7:7:261:0:0:0,-2.10721,-10 0/0:49.2103:9:9:340:0:0:0,-2.70927,-10 0/0:99:30:30:1118:0:0:0,-9.0309,-10 0/0:99:27:27:1013:0:0:0,-8.12781,-10 0/0:99:26:26:957:0:0:0,-7.82678,-10 0/0:99:33:33:1231:0:0:0,-9.93399,-10 0/0:99:27:27:1010:0:0:0,-8.12781,-10 0/0:46.2:8:8:281:0:0:0,-2.40824,-10 0/0:73.2927:17:17:630:0:0:0,-5.11751,-10 0/0:55.2309:11:11:415:0:0:0,-3.31133,-10 0/0:40.1794:6:6:195:0:0:0,-1.80618,-10 0/1:99:18:7:255:11:402:-10,0,-10 0/0:58.2412:12:12:445:0:0:0,-3.61236,-10 0/1:0.000143215:6:0:0:6:226:-10,-1.80618,0 scaffold_56 2752517 . T C 151.398 . AB=0.421053;ABP=4.03889;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=2178;DPB=2178;DPRA=0.820477;EPP=9.04217;EPPR=13.2324;GTI=0;LEN=1;MEANALT=1;MQM=59.5556;MQMR=59.8832;NS=92;NUMALT=1;ODDS=14.9649;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=320;QR=79647;RO=2167;RPP=22.5536;RPPR=4604.94;RUN=1;SAF=7;SAP=9.04217;SAR=2;SRF=1122;SRP=8.95154;SRR=1045;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:17:17:630:0:0:0,-5.11751,-10 0/0:95.2859:14:14:531:0:0:0,-4.21442,-10 0/0:99:19:19:708:0:0:0,-5.71957,-10 0/0:86.2573:11:11:414:0:0:0,-3.31133,-10 0/0:99:21:21:762:0:0:0,-6.32163,-10 0/0:89.2673:12:12:455:0:0:0,-3.61236,-10 0/0:99:40:40:1477:0:0:0,-10,-10 0/0:99:39:39:1453:0:0:0,-10,-10 0/0:83.2472:10:10:378:0:0:0,-3.0103,-10 0/0:77.2267:8:8:279:0:0:0,-2.40824,-10 0/0:77.2267:8:8:304:0:0:0,-2.40824,-10 0/0:83.2472:10:10:367:0:0:0,-3.0103,-10 0/0:99:33:33:1162:0:0:0,-9.93399,-10 0/0:99:38:38:1385:0:0:0,-10,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:99:33:33:1227:0:0:0,-9.93399,-10 0/0:77.2267:8:8:304:0:0:0,-2.40824,-10 0/0:99:24:24:872:0:0:0,-7.22472,-10 0/0:99:44:44:1653:0:0:0,-10,-10 0/0:99:27:27:986:0:0:0,-8.12781,-10 0/0:99:35:35:1312:0:0:0,-10,-10 0/0:83.2472:10:10:378:0:0:0,-3.0103,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:99:23:23:870:0:0:0,-6.92369,-10 0/0:99:22:22:831:0:0:0,-6.62266,-10 0/0:99:20:20:749:0:0:0,-6.0206,-10 0/0:98.2936:15:15:529:0:0:0,-4.51545,-10 0/0:99:29:29:1021:0:0:0,-8.72987,-10 0/0:99:42:42:1540:0:0:0,-10,-10 0/0:74.2165:7:7:233:0:0:0,-2.10721,-10 0/0:65.1855:4:4:148:0:0:0,-1.20412,-10 0/0:99:24:24:865:0:0:0,-7.22472,-10 0/0:71.2062:6:6:226:0:0:0,-1.80618,-10 0/0:99:34:33:1239:0:0:0,-9.93399,-10 0/0:86.2573:11:11:407:0:0:0,-3.31133,-10 0/0:99:18:18:661:0:0:0,-5.41854,-10 0/0:99:41:41:1533:0:0:0,-10,-10 0/0:95.2859:14:14:495:0:0:0,-4.21442,-10 0/0:99:20:20:759:0:0:0,-6.0206,-10 0/0:99:41:41:1493:0:0:0,-10,-10 0/0:99:29:29:1076:0:0:0,-8.72987,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:99:35:35:1297:0:0:0,-10,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:80.237:9:9:320:0:0:0,-2.70927,-10 0/0:99:47:47:1702:0:0:0,-10,-10 0/0:99:29:29:1081:0:0:0,-8.72987,-10 0/0:99:17:17:636:0:0:0,-5.11751,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:99:18:18:679:0:0:0,-5.41854,-10 0/0:99:52:51:1884:0:0:0,-10,-10 0/0:95.2859:14:14:521:0:0:0,-4.21442,-10 0/0:83.2472:10:10:353:0:0:0,-3.0103,-10 0/0:99:44:44:1643:0:0:0,-10,-10 0/0:99:18:18:672:0:0:0,-5.41854,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:71.2062:6:6:178:0:0:0,-1.80618,-10 0/0:99:21:21:753:0:0:0,-6.32163,-10 0/0:99:20:20:727:0:0:0,-6.0206,-10 0/0:99:42:42:1578:0:0:0,-10,-10 0/0:99:19:19:712:0:0:0,-5.71957,-10 0/0:99:43:43:1586:0:0:0,-10,-10 0/0:99:21:21:773:0:0:0,-6.32163,-10 0/0:89.2673:12:12:424:0:0:0,-3.61236,-10 0/0:99:32:32:1153:0:0:0,-9.63296,-10 0/0:99:23:23:818:0:0:0,-6.92369,-10 0/0:95.2859:14:14:516:0:0:0,-4.21442,-10 0/0:99:44:44:1608:0:0:0,-10,-10 0/0:92.2786:13:13:491:0:0:0,-3.91339,-10 0/0:99:33:33:1229:0:0:0,-9.93399,-10 0/0:99:49:49:1843:0:0:0,-10,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/0:99:19:19:693:0:0:0,-5.71957,-10 0/0:99:34:34:1245:0:0:0,-10,-10 0/0:99:19:19:671:0:0:0,-5.71957,-10 0/0:92.2786:13:13:469:0:0:0,-3.91339,-10 0/0:98.2936:15:15:558:0:0:0,-4.51545,-10 0/0:83.2472:10:10:367:0:0:0,-3.0103,-10 0/0:99:18:18:663:0:0:0,-5.41854,-10 0/0:99:44:44:1601:0:0:0,-10,-10 0/0:99:29:29:1069:0:0:0,-8.72987,-10 0/0:99:30:30:1098:0:0:0,-9.0309,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:99:25:25:857:0:0:0,-7.52575,-10 0/0:71.2062:6:6:176:0:0:0,-1.80618,-10 0/0:64.9918:20:19:705:1:38:0,-0.91957,-10 0/0:92.2786:13:13:469:0:0:0,-3.91339,-10 0/0:77.2267:8:8:303:0:0:0,-2.40824,-10 0/0:99:25:25:895:0:0:0,-7.52575,-10 0/1:99:19:11:406:8:282:-10,0,-10 0/0:99:22:22:805:0:0:0,-6.62266,-10 scaffold_56 2775522 . T C 559.114 . AB=0.423077;ABP=5.68288;AC=2;AF=0.0108696;AN=184;AO=23;CIGAR=1X;DP=1908;DPB=1908;DPRA=1.38325;EPP=10.6577;EPPR=3.4266;GTI=0;LEN=1;MEANALT=1;MQM=59.3043;MQMR=59.9655;NS=92;NUMALT=1;ODDS=7.36819;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=866;QR=68871;RO=1883;RPP=52.9542;RPPR=4039.94;RUN=1;SAF=16;SAP=10.6577;SAR=7;SRF=938;SRP=3.06681;SRR=945;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:68.1273:13:13:477:0:0:0,-3.91339,-10 0/0:59.0965:10:10:369:0:0:0,-3.0103,-10 0/0:99:25:25:910:0:0:0,-7.52575,-10 0/0:65.1171:12:12:428:0:0:0,-3.61236,-10 0/0:65.1171:12:12:454:0:0:0,-3.61236,-10 0/0:56.0862:9:9:330:0:0:0,-2.70927,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:99:30:30:1100:0:0:0,-9.0309,-10 0/0:83.1786:18:18:639:0:0:0,-5.41854,-10 0/0:32.0038:1:1:38:0:0:0,-0.30103,-3.8 0/0:44.045:5:5:185:0:0:0,-1.50515,-10 0/0:56.0862:9:9:333:0:0:0,-2.70927,-10 0/0:99:41:41:1521:0:0:0,-10,-10 0/0:99:33:33:1173:0:0:0,-9.93399,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:99:32:32:1179:0:0:0,-9.63296,-10 0/1:99:27:14:530:13:493:-10,0,-10 0/0:44.045:5:5:189:0:0:0,-1.50515,-10 0/1:99:25:16:595:9:335:-10,0,-10 0/0:99:37:37:1345:0:0:0,-10,-10 0/0:68.1273:13:13:494:0:0:0,-3.91339,-10 0/0:99:39:39:1409:0:0:0,-10,-10 0/0:71.1376:14:14:479:0:0:0,-4.21442,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:89.1992:20:20:758:0:0:0,-6.0206,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:99:24:24:864:0:0:0,-7.22472,-10 0/0:62.1068:11:11:390:0:0:0,-3.31133,-10 0/0:80.1685:17:17:613:0:0:0,-5.11751,-10 0/0:99:43:43:1571:0:0:0,-10,-10 0/0:41.0347:4:4:152:0:0:0,-1.20412,-10 0/0:62.1068:11:11:374:0:0:0,-3.31133,-10 0/0:92.2092:21:21:753:0:0:0,-6.32163,-10 0/0:56.0862:9:9:320:0:0:0,-2.70927,-10 0/0:92.2092:21:21:798:0:0:0,-6.32163,-10 0/0:62.1068:11:11:369:0:0:0,-3.31133,-10 0/0:62.1068:11:11:366:0:0:0,-3.31133,-10 0/0:99:28:27:975:0:0:0,-8.12781,-10 0/0:86.189:19:19:706:0:0:0,-5.71957,-10 0/0:71.1376:14:14:526:0:0:0,-4.21442,-10 0/0:86.189:19:19:716:0:0:0,-5.71957,-10 0/0:77.1582:16:16:570:0:0:0,-4.81648,-10 0/0:71.1376:14:14:465:0:0:0,-4.21442,-10 0/0:99:38:38:1413:0:0:0,-10,-10 0/0:95.2156:22:22:817:0:0:0,-6.62266,-10 0/0:92.2092:21:21:718:0:0:0,-6.32163,-10 0/0:99:56:56:2073:0:0:0,-10,-10 0/0:99:35:35:1255:0:0:0,-10,-10 0/0:86.189:19:19:646:0:0:0,-5.71957,-10 0/0:79.7199:33:32:1179:1:38:0,-4.61548,-10 0/0:56.0862:9:9:336:0:0:0,-2.70927,-10 0/0:99:40:39:1419:0:0:0,-10,-10 0/0:62.1068:11:11:405:0:0:0,-3.31133,-10 0/0:65.1171:12:12:427:0:0:0,-3.61236,-10 0/0:99:34:34:1249:0:0:0,-10,-10 0/0:77.1582:16:16:600:0:0:0,-4.81648,-10 0/0:92.2092:21:21:744:0:0:0,-6.32163,-10 0/0:44.045:5:5:190:0:0:0,-1.50515,-10 0/0:99:24:24:858:0:0:0,-7.22472,-10 0/0:62.1068:11:11:418:0:0:0,-3.31133,-10 0/0:99:36:36:1336:0:0:0,-10,-10 0/0:80.1685:17:17:636:0:0:0,-5.11751,-10 0/0:99:36:36:1287:0:0:0,-10,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:62.1068:11:11:382:0:0:0,-3.31133,-10 0/0:99:32:32:1161:0:0:0,-9.63296,-10 0/0:74.1479:15:15:568:0:0:0,-4.51545,-10 0/0:59.0965:10:10:344:0:0:0,-3.0103,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:56.0862:9:9:338:0:0:0,-2.70927,-10 0/0:65.1171:12:12:446:0:0:0,-3.61236,-10 0/0:99:27:27:1007:0:0:0,-8.12781,-10 0/0:98.2214:23:23:839:0:0:0,-6.92369,-10 0/0:83.1786:18:18:669:0:0:0,-5.41854,-10 0/0:99:37:37:1324:0:0:0,-10,-10 0/0:56.0862:9:9:338:0:0:0,-2.70927,-10 0/0:74.1479:15:15:558:0:0:0,-4.51545,-10 0/0:56.0862:9:9:338:0:0:0,-2.70927,-10 0/0:53.0759:8:8:304:0:0:0,-2.40824,-10 0/0:65.1171:12:12:456:0:0:0,-3.61236,-10 0/0:99:50:50:1808:0:0:0,-10,-10 0/0:99:33:33:1250:0:0:0,-9.93399,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:74.1479:15:15:569:0:0:0,-4.51545,-10 0/0:99:34:34:1260:0:0:0,-10,-10 0/0:53.0759:8:8:280:0:0:0,-2.40824,-10 0/0:89.1992:20:20:759:0:0:0,-6.0206,-10 0/0:71.1376:14:14:532:0:0:0,-4.21442,-10 0/0:41.0347:4:4:152:0:0:0,-1.20412,-10 0/0:95.2156:22:22:832:0:0:0,-6.62266,-10 0/0:98.2214:23:23:781:0:0:0,-6.92369,-10 0/0:80.1685:17:17:599:0:0:0,-5.11751,-10 scaffold_56 2791664 . A G 134.758 . AB=0.4;ABP=4.74748;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1208;DPB=1208;DPRA=1.53199;EPP=7.35324;EPPR=3.09919;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9641;NS=92;NUMALT=1;ODDS=8.30815;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=262;QR=43511;RO=1197;RPP=20.3821;RPPR=2602.26;RUN=1;SAF=6;SAP=7.35324;SAR=2;SRF=602;SRP=3.09919;SRR=595;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.2126:14:14:508:0:0:0,-4.21442,-10 0/0:66.192:12:12:429:0:0:0,-3.61236,-10 0/0:78.2332:16:16:577:0:0:0,-4.81648,-10 0/0:63.1817:11:11:386:0:0:0,-3.31133,-10 0/0:54.1508:8:8:295:0:0:0,-2.40824,-10 0/0:51.1405:7:7:266:0:0:0,-2.10721,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/1:99:20:12:424:8:262:-10,0,-10 0/0:66.192:12:12:453:0:0:0,-3.61236,-10 0/0:39.0993:3:3:112:0:0:0,-0.90309,-10 0/0:36.089:2:2:75:0:0:0,-0.60206,-7.125 0/0:36.089:2:2:76:0:0:0,-0.60206,-7.22 0/0:87.2641:19:19:709:0:0:0,-5.71957,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:99:24:24:879:0:0:0,-7.22472,-10 0/0:72.2126:14:14:483:0:0:0,-4.21442,-10 0/0:84.2538:18:18:656:0:0:0,-5.41854,-10 0/0:48.1302:6:6:227:0:0:0,-1.80618,-10 0/0:60.1714:10:10:343:0:0:0,-3.0103,-10 0/0:84.2538:18:18:668:0:0:0,-5.41854,-10 0/0:75.2229:16:15:569:0:0:0,-4.51545,-10 0/0:90.2739:20:20:706:0:0:0,-6.0206,-10 0/0:45.1199:5:5:190:0:0:0,-1.50515,-10 0/0:69.2023:13:13:494:0:0:0,-3.91339,-10 0/0:63.1817:11:11:385:0:0:0,-3.31133,-10 0/0:90.2739:20:20:727:0:0:0,-6.0206,-10 0/0:54.1508:8:8:304:0:0:0,-2.40824,-10 0/0:69.2023:13:13:460:0:0:0,-3.91339,-10 0/0:81.2435:17:17:584:0:0:0,-5.11751,-10 0/0:69.2023:13:13:475:0:0:0,-3.91339,-10 0/0:39.0993:3:3:114:0:0:0,-0.90309,-10 0/0:60.1714:10:10:353:0:0:0,-3.0103,-10 0/0:84.2538:18:18:636:0:0:0,-5.41854,-10 0/0:66.192:12:12:452:0:0:0,-3.61236,-10 0/0:72.2126:14:14:515:0:0:0,-4.21442,-10 0/0:39.0993:3:3:103:0:0:0,-0.90309,-9.61333 0/0:51.1405:7:7:266:0:0:0,-2.10721,-10 0/0:72.2126:14:14:508:0:0:0,-4.21442,-10 0/0:51.1405:7:7:253:0:0:0,-2.10721,-10 0/0:51.1405:7:7:262:0:0:0,-2.10721,-10 0/0:96.293:22:22:734:0:0:0,-6.62266,-10 0/0:66.192:12:12:407:0:0:0,-3.61236,-10 0/0:45.1199:5:5:179:0:0:0,-1.50515,-10 0/0:72.2126:14:14:518:0:0:0,-4.21442,-10 0/0:84.2538:18:18:627:0:0:0,-5.41854,-10 0/0:51.1405:7:7:253:0:0:0,-2.10721,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:78.2332:16:16:608:0:0:0,-4.81648,-10 0/0:63.1817:11:11:414:0:0:0,-3.31133,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:48.1302:6:6:217:0:0:0,-1.80618,-10 0/0:96.293:22:22:794:0:0:0,-6.62266,-10 0/0:51.1405:7:7:255:0:0:0,-2.10721,-10 0/0:42.1096:4:4:152:0:0:0,-1.20412,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:63.1817:11:11:394:0:0:0,-3.31133,-10 0/0:72.2126:14:14:462:0:0:0,-4.21442,-10 0/0:54.1508:8:8:280:0:0:0,-2.40824,-10 0/0:72.2126:14:14:462:0:0:0,-4.21442,-10 0/0:57.1611:10:9:316:0:0:0,-2.70927,-10 0/0:96.293:22:22:804:0:0:0,-6.62266,-10 0/0:54.1508:8:8:302:0:0:0,-2.40824,-10 0/0:87.2641:19:19:708:0:0:0,-5.71957,-10 0/0:75.2229:15:15:542:0:0:0,-4.51545,-10 0/0:60.1714:10:10:375:0:0:0,-3.0103,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:66.192:12:12:449:0:0:0,-3.61236,-10 0/0:39.0993:3:3:105:0:0:0,-0.90309,-9.8 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:66.192:12:12:428:0:0:0,-3.61236,-10 0/0:75.2229:15:15:503:0:0:0,-4.51545,-10 0/0:81.2435:17:17:645:0:0:0,-5.11751,-10 0/0:69.2023:13:13:448:0:0:0,-3.91339,-10 0/0:63.1817:11:11:406:0:0:0,-3.31133,-10 0/0:99:26:26:981:0:0:0,-7.82678,-10 0/0:60.1714:10:10:353:0:0:0,-3.0103,-10 0/0:66.192:12:12:450:0:0:0,-3.61236,-10 0/0:54.1508:8:8:279:0:0:0,-2.40824,-10 0/0:42.1096:4:4:152:0:0:0,-1.20412,-10 0/0:39.0993:3:3:109:0:0:0,-0.90309,-10 0/0:99:24:24:854:0:0:0,-7.22472,-10 0/0:75.2229:15:15:558:0:0:0,-4.51545,-10 0/0:81.2435:17:17:622:0:0:0,-5.11751,-10 0/0:63.1817:11:11:405:0:0:0,-3.31133,-10 0/0:66.192:12:12:445:0:0:0,-3.61236,-10 0/0:36.089:2:2:76:0:0:0,-0.60206,-7.22 0/0:60.1714:10:10:373:0:0:0,-3.0103,-10 0/0:51.1405:7:7:264:0:0:0,-2.10721,-10 0/0:69.2023:13:13:479:0:0:0,-3.91339,-10 0/0:66.192:12:12:455:0:0:0,-3.61236,-10 0/0:66.192:13:12:443:0:0:0,-3.61236,-10 0/0:69.2023:13:13:481:0:0:0,-3.91339,-10 scaffold_56 2837856 . T C 465.236 . AB=0.418605;ABP=5.48477;AC=1;AF=0.00543478;AN=184;AO=19;CIGAR=1X;DP=2157;DPB=2157;DPRA=1.42037;EPP=4.03889;EPPR=4.72002;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9991;NS=92;NUMALT=1;ODDS=8.59586;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=707;QR=77659;RO=2135;RPP=44.2683;RPPR=4621.75;RUN=1;SAF=8;SAP=4.03889;SAR=11;SRF=1090;SRP=5.06989;SRR=1045;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.4574:17:17:627:0:0:0,-5.11751,-10 0/0:64.4265:14:14:517:0:0:0,-4.21442,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:58.4059:12:12:422:0:0:0,-3.61236,-10 0/0:61.4162:13:13:466:0:0:0,-3.91339,-10 0/0:55.3956:11:11:416:0:0:0,-3.31133,-10 0/0:99:38:38:1351:0:0:0,-10,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:61.4162:13:13:494:0:0:0,-3.91339,-10 0/0:37.3338:5:5:166:0:0:0,-1.50515,-10 0/0:52.3853:10:10:343:0:0:0,-3.0103,-10 0/0:58.4059:12:12:456:0:0:0,-3.61236,-10 0/0:99:36:34:1233:0:0:0,-10,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:99:27:27:1002:0:0:0,-8.12781,-10 0/0:99:34:34:1224:0:0:0,-10,-10 0/0:64.4265:14:14:484:0:0:0,-4.21442,-10 0/0:76.4677:18:18:628:0:0:0,-5.41854,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:43.2786:23:22:807:1:38:0,-1.76196,-10 0/0:99:37:37:1323:0:0:0,-10,-10 0/0:67.4368:15:15:567:0:0:0,-4.51545,-10 0/0:85.4985:21:21:792:0:0:0,-6.32163,-10 0/0:76.4677:18:18:669:0:0:0,-5.41854,-10 0/0:99:33:33:1188:0:0:0,-9.93399,-10 0/0:85.4985:21:21:732:0:0:0,-6.32163,-10 0/0:70.4471:16:16:568:0:0:0,-4.81648,-10 0/0:70.4471:16:16:598:0:0:0,-4.81648,-10 0/0:99:44:44:1644:0:0:0,-10,-10 0/0:49.375:9:9:326:0:0:0,-2.70927,-10 0/0:40.3441:6:6:205:0:0:0,-1.80618,-10 0/0:94.5284:24:24:892:0:0:0,-7.22472,-10 0/0:55.3956:11:11:402:0:0:0,-3.31133,-10 0/0:55.3956:11:11:411:0:0:0,-3.31133,-10 0/0:85.4985:21:21:750:0:0:0,-6.32163,-10 0/0:76.4677:18:18:660:0:0:0,-5.41854,-10 0/0:99:35:35:1275:0:0:0,-10,-10 0/0:73.4574:17:17:629:0:0:0,-5.11751,-10 0/0:76.4677:18:18:650:0:0:0,-5.41854,-10 0/0:99:44:44:1633:0:0:0,-10,-10 0/0:94.5284:24:24:852:0:0:0,-7.22472,-10 0/0:67.4368:15:15:569:0:0:0,-4.51545,-10 0/0:99:34:34:1261:0:0:0,-10,-10 0/0:70.4471:16:16:568:0:0:0,-4.81648,-10 0/0:82.4882:20:20:676:0:0:0,-6.0206,-10 0/0:99:55:55:2028:0:0:0,-10,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:97.5376:25:25:927:0:0:0,-7.52575,-10 0/0:99:41:40:1420:0:0:0,-10,-10 0/0:94.5284:24:24:880:0:0:0,-7.22472,-10 0/0:99:36:36:1340:0:0:0,-10,-10 0/0:76.4677:18:18:666:0:0:0,-5.41854,-10 0/0:43.3544:7:7:240:0:0:0,-2.10721,-10 0/0:99:42:42:1552:0:0:0,-10,-10 0/0:79.478:19:19:658:0:0:0,-5.71957,-10 0/0:99:28:28:1022:0:0:0,-8.42884,-10 0/0:49.375:9:9:341:0:0:0,-2.70927,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:55.3956:11:11:364:0:0:0,-3.31133,-10 0/0:99:40:40:1476:0:0:0,-10,-10 0/0:99:29:29:1039:0:0:0,-8.72987,-10 0/0:99:44:44:1596:0:0:0,-10,-10 0/0:99:27:27:959:0:0:0,-8.12781,-10 0/0:49.375:9:9:342:0:0:0,-2.70927,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:99:30:30:1072:0:0:0,-9.0309,-10 0/0:73.4574:17:17:640:0:0:0,-5.11751,-10 0/0:99:42:42:1544:0:0:0,-10,-10 0/0:73.4574:17:17:568:0:0:0,-5.11751,-10 0/0:91.5187:23:23:822:0:0:0,-6.92369,-10 0/0:99:46:46:1691:0:0:0,-10,-10 0/0:70.4471:16:16:603:0:0:0,-4.81648,-10 0/0:94.5284:24:24:879:0:0:0,-7.22472,-10 0/0:99:50:50:1812:0:0:0,-10,-10 0/0:91.5187:23:23:832:0:0:0,-6.92369,-10 0/0:55.3956:11:11:401:0:0:0,-3.31133,-10 0/0:76.4677:18:18:675:0:0:0,-5.41854,-10 0/0:46.3647:8:8:289:0:0:0,-2.40824,-10 0/0:46.3647:8:8:303:0:0:0,-2.40824,-10 0/0:99:52:52:1922:0:0:0,-10,-10 0/1:99:43:25:913:18:669:-10,0,-10 0/0:79.478:19:19:649:0:0:0,-5.71957,-10 0/0:79.478:19:19:667:0:0:0,-5.71957,-10 0/0:94.5284:24:24:890:0:0:0,-7.22472,-10 0/0:43.3544:7:7:259:0:0:0,-2.10721,-10 0/0:67.4368:15:15:561:0:0:0,-4.51545,-10 0/0:94.5284:24:24:867:0:0:0,-7.22472,-10 0/0:43.3544:7:7:263:0:0:0,-2.10721,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:79.478:19:19:678:0:0:0,-5.71957,-10 0/0:70.4471:16:16:521:0:0:0,-4.81648,-10 scaffold_56 2912984 . A T 11354.3 . AB=0.509756;ABP=3.34926;AC=43;AF=0.244318;AN=176;AO=408;CIGAR=1X;DP=1635;DPB=1635;DPRA=1.14756;EPP=4.7347;EPPR=9.61704;GTI=1;LEN=1;MEANALT=1.03333;MQM=60;MQMR=59.9722;NS=88;NUMALT=1;ODDS=0.318756;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=14868;QR=44624;RO=1223;RPP=888.971;RPPR=2658.72;RUN=1;SAF=213;SAP=4.7347;SAR=195;SRF=581;SRP=9.61704;SRR=642;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:32.1688:9:9:308:0:0:0,-2.70927,-10 0/0:26.1482:7:7:256:0:0:0,-2.10721,-10 1/1:15.1125:9:0:0:9:313:-10,-2.70927,0 0/0:47.2203:14:14:507:0:0:0,-4.21442,-10 0/0:50.2306:15:15:553:0:0:0,-4.51545,-10 1/1:6.08165:6:0:0:6:221:-10,-1.80618,0 0/0:99:37:37:1378:0:0:0,-10,-10 0/0:99:35:35:1257:0:0:0,-10,-10 0/0:62.2718:19:19:721:0:0:0,-5.71957,-10 0/0:23.1379:6:6:205:0:0:0,-1.80618,-10 1/1:6.08165:6:0:0:6:218:-10,-1.80618,0 0/1:25.3712:8:7:266:1:38:-2.29485,0,-10 1/1:30.164:14:0:0:14:482:-10,-4.21442,0 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/1:99:30:14:507:16:569:-10,0,-10 0/0:68.2924:21:21:739:0:0:0,-6.32163,-10 0/0:74.313:23:23:844:0:0:0,-6.92369,-10 1/1:21.1331:11:0:0:11:409:-10,-3.31133,0 0/0:23.1379:6:6:217:0:0:0,-1.80618,-10 0/1:99:31:18:660:13:460:-10,0,-10 0/1:99:14:4:151:10:354:-10,0,-10 0/1:99:38:18:676:20:717:-10,0,-10 0/0:41.1997:12:12:410:0:0:0,-3.61236,-10 0/0:77.3233:24:24:882:0:0:0,-7.22472,-10 0/0:83.3437:26:26:969:0:0:0,-7.82678,-10 1/1:18.1228:10:0:0:10:372:-10,-3.0103,0 1/1:45.2155:19:0:0:19:691:-10,-5.71957,0 .:.:.:.:.:.:.:. 0/0:74.313:23:23:852:0:0:0,-6.92369,-10 0/1:99:35:14:508:21:735:-10,0,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:65.2821:20:20:684:0:0:0,-6.0206,-10 0/0:32.1688:9:9:342:0:0:0,-2.70927,-10 0/0:65.2821:20:20:733:0:0:0,-6.0206,-10 0/0:29.1585:8:8:299:0:0:0,-2.40824,-10 0/0:59.2615:18:18:647:0:0:0,-5.41854,-10 1/1:66.2876:26:0:0:26:968:-10,-7.82678,0 0/0:41.1997:12:12:455:0:0:0,-3.61236,-10 0/1:99:13:6:224:7:243:-10,0,-10 1/1:42.2052:18:0:0:18:683:-10,-5.41854,0 0/0:68.2924:21:21:762:0:0:0,-6.32163,-10 1/1:54.2464:22:0:0:22:830:-10,-6.62266,0 0/1:99:30:15:557:15:523:-10,0,-10 0/1:99:16:7:260:9:325:-10,0,-10 0/1:99:14:7:243:7:266:-10,0,-10 0/1:99:35:15:546:20:736:-10,0,-10 0/0:95.3848:30:30:1107:0:0:0,-9.0309,-10 0/0:38.1894:11:11:410:0:0:0,-3.31133,-10 0/1:99:32:23:858:9:340:-10,0,-10 0/0:47.2203:14:14:517:0:0:0,-4.21442,-10 0/0:99:38:38:1421:0:0:0,-10,-10 .:.:.:.:.:.:.:. 0/0:29.1585:8:8:298:0:0:0,-2.40824,-10 0/1:99:38:16:592:22:810:-10,0,-10 0/0:20.1276:5:5:172:0:0:0,-1.50515,-10 0/0:71.3027:22:22:810:0:0:0,-6.62266,-10 0/0:23.1379:6:6:214:0:0:0,-1.80618,-10 1/1:36.1846:16:0:0:16:582:-10,-4.81648,0 0/0:53.2409:16:16:592:0:0:0,-4.81648,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:62.2718:19:19:683:0:0:0,-5.71957,-10 0/1:99:29:12:418:16:605:-10,0,-10 0/0:53.2409:16:16:571:0:0:0,-4.81648,-10 0/0:44.21:13:13:490:0:0:0,-3.91339,-10 0/0:99:36:36:1308:0:0:0,-10,-10 0/1:99:19:11:411:8:299:-10,0,-10 0/0:26.1482:7:7:255:0:0:0,-2.10721,-10 0/0:92.3746:29:29:1069:0:0:0,-8.72987,-10 0/0:59.2615:18:18:611:0:0:0,-5.41854,-10 0/0:50.2306:15:15:560:0:0:0,-4.51545,-10 0/0:74.313:23:23:814:0:0:0,-6.92369,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:44.21:13:13:462:0:0:0,-3.91339,-10 0/0:86.3538:27:27:925:0:0:0,-8.12781,-10 0/0:26.1482:7:7:239:0:0:0,-2.10721,-10 0/0:23.1379:6:6:227:0:0:0,-1.80618,-10 0/0:41.1997:12:12:421:0:0:0,-3.61236,-10 0/1:0.1469:3:0:0:3:114:-10,-0.90309,0 0/0:23.1379:6:6:227:0:0:0,-1.80618,-10 1/1:75.3185:29:0:0:29:1071:-10,-8.72987,0 0/1:99:25:13:487:12:445:-10,0,-10 0/0:89.3636:28:28:1056:0:0:0,-8.42884,-10 0/0:68.2924:21:21:756:0:0:0,-6.32163,-10 0/0:56.2512:17:17:646:0:0:0,-5.11751,-10 0/0:20.1276:5:5:181:0:0:0,-1.50515,-10 1/1:27.1537:13:0:0:13:449:-10,-3.91339,0 0/0:44.21:15:13:469:0:0:0,-3.91339,-10 0/0:17.1173:4:4:129:0:0:0,-1.20412,-10 0/0:71.3027:22:22:787:0:0:0,-6.62266,-10 0/0:53.2409:17:16:586:0:0:0,-4.81648,-10 0/0:59.2615:18:18:632:0:0:0,-5.41854,-10 scaffold_56 2927764 . A G 696.537 . AB=0.426471;ABP=6.20364;AC=3;AF=0.0166667;AN=180;AO=29;CIGAR=1X;DP=1282;DPB=1282;DPRA=1.62438;EPP=3.08518;EPPR=3.30365;GTI=0;LEN=1;MEANALT=1;MQM=59.0345;MQMR=59.9273;NS=90;NUMALT=1;ODDS=3.71608;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1030;QR=45781;RO=1251;RPP=65.983;RPPR=2719.52;RUN=1;SAF=15;SAP=3.08518;SAR=14;SRF=632;SRP=3.30365;SRR=619;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.7466:12:12:386:0:0:0,-3.61236,-10 0/0:34.7054:8:8:299:0:0:0,-2.40824,-10 0/0:52.7672:14:14:527:0:0:0,-4.21442,-10 0/0:31.6951:7:7:265:0:0:0,-2.10721,-10 0/0:34.7054:8:8:273:0:0:0,-2.40824,-10 0/0:22.6642:4:4:152:0:0:0,-1.20412,-10 0/0:99:30:30:1120:0:0:0,-9.0309,-10 0/0:64.8084:18:18:675:0:0:0,-5.41854,-10 0/0:31.6951:7:7:266:0:0:0,-2.10721,-10 0/0:16.6436:2:2:53:0:0:0,-0.60206,-5.035 0/0:22.6642:4:4:150:0:0:0,-1.20412,-10 0/0:25.6745:5:5:188:0:0:0,-1.50515,-10 0/0:55.7775:15:15:535:0:0:0,-4.51545,-10 0/1:99:22:15:557:7:213:-10,0,-10 0/0:61.7981:17:17:627:0:0:0,-5.11751,-10 0/1:99:22:11:416:11:399:-10,0,-10 0/0:64.8084:18:18:656:0:0:0,-5.41854,-10 0/0:28.6848:6:6:227:0:0:0,-1.80618,-10 0/0:58.7878:16:16:584:0:0:0,-4.81648,-10 0/0:82.8701:24:24:872:0:0:0,-7.22472,-10 0/0:55.7775:15:15:543:0:0:0,-4.51545,-10 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/0:22.6642:4:4:147:0:0:0,-1.20412,-10 0/0:58.7878:16:16:592:0:0:0,-4.81648,-10 0/0:49.7569:13:13:435:0:0:0,-3.91339,-10 0/0:70.829:20:20:729:0:0:0,-6.0206,-10 0/0:55.7775:15:15:531:0:0:0,-4.51545,-10 0/0:46.7466:12:12:440:0:0:0,-3.61236,-10 0/0:37.7157:9:9:335:0:0:0,-2.70927,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:28.6848:6:6:228:0:0:0,-1.80618,-10 0/0:37.7157:9:9:314:0:0:0,-2.70927,-10 .:.:.:.:.:.:.:. 0/0:31.6951:7:7:259:0:0:0,-2.10721,-10 0/0:49.7569:13:13:492:0:0:0,-3.91339,-10 0/0:22.6642:4:4:141:0:0:0,-1.20412,-10 0/0:58.7878:16:16:604:0:0:0,-4.81648,-10 0/0:73.8393:21:21:756:0:0:0,-6.32163,-10 0/0:55.7775:15:15:556:0:0:0,-4.51545,-10 0/0:34.7054:8:8:301:0:0:0,-2.40824,-10 0/0:70.829:20:20:713:0:0:0,-6.0206,-10 0/0:58.7878:16:16:539:0:0:0,-4.81648,-10 0/0:49.7569:13:13:455:0:0:0,-3.91339,-10 0/0:76.8496:22:22:804:0:0:0,-6.62266,-10 0/0:67.8187:19:19:694:0:0:0,-5.71957,-10 0/0:43.7363:11:11:390:0:0:0,-3.31133,-10 0/0:99:40:40:1479:0:0:0,-10,-10 0/0:70.829:20:20:704:0:0:0,-6.0206,-10 0/0:37.7157:9:9:319:0:0:0,-2.70927,-10 0/0:97.921:29:29:1033:0:0:0,-8.72987,-10 0/0:61.7981:17:17:634:0:0:0,-5.11751,-10 0/0:91.9009:27:27:1005:0:0:0,-8.12781,-10 0/0:37.7157:9:9:340:0:0:0,-2.70927,-10 0/0:16.6436:2:2:63:0:0:0,-0.60206,-5.985 0/0:99:34:34:1227:0:0:0,-10,-10 0/0:28.6848:6:6:222:0:0:0,-1.80618,-10 0/0:58.7878:16:16:591:0:0:0,-4.81648,-10 0/0:46.7466:12:12:449:0:0:0,-3.61236,-10 0/0:52.7672:14:14:489:0:0:0,-4.21442,-10 0/0:28.6848:6:6:226:0:0:0,-1.80618,-10 0/0:79.8599:23:23:824:0:0:0,-6.92369,-10 0/0:73.8393:21:21:784:0:0:0,-6.32163,-10 0/0:46.7466:12:12:445:0:0:0,-3.61236,-10 0/0:46.7466:12:12:450:0:0:0,-3.61236,-10 0/0:40.726:11:10:371:0:0:0,-3.0103,-10 0/1:99:24:13:490:11:418:-10,0,-10 0/0:76.8496:22:22:793:0:0:0,-6.62266,-10 0/0:28.6848:6:6:228:0:0:0,-1.80618,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:37.7157:9:9:312:0:0:0,-2.70927,-10 0/0:49.7569:13:13:493:0:0:0,-3.91339,-10 0/0:82.8701:24:24:910:0:0:0,-7.22472,-10 0/0:43.7363:11:11:415:0:0:0,-3.31133,-10 0/0:55.7775:15:15:561:0:0:0,-4.51545,-10 0/0:73.8393:21:21:754:0:0:0,-6.32163,-10 0/0:25.6745:5:5:190:0:0:0,-1.50515,-10 0/0:46.7466:12:12:431:0:0:0,-3.61236,-10 0/0:31.6951:8:7:257:0:0:0,-2.10721,-10 0/0:28.6848:6:6:225:0:0:0,-1.80618,-10 .:.:.:.:.:.:.:. 0/0:49.7569:13:13:488:0:0:0,-3.91339,-10 0/0:55.7775:15:15:549:0:0:0,-4.51545,-10 0/0:49.7569:13:13:441:0:0:0,-3.91339,-10 0/0:73.8393:21:21:766:0:0:0,-6.32163,-10 0/0:37.7157:9:9:339:0:0:0,-2.70927,-10 0/0:16.6436:2:2:74:0:0:0,-0.60206,-7.03 0/0:37.7157:9:9:335:0:0:0,-2.70927,-10 0/0:28.6848:6:6:228:0:0:0,-1.80618,-10 0/0:25.6745:5:5:186:0:0:0,-1.50515,-10 0/0:37.7157:9:9:339:0:0:0,-2.70927,-10 0/0:55.7775:15:15:561:0:0:0,-4.51545,-10 0/0:43.7363:11:11:400:0:0:0,-3.31133,-10 scaffold_56 2990934 . A G 916.405 . AB=0.705882;ABP=21.7871;AC=2;AF=0.0108696;AN=184;AO=39;CIGAR=1X;DP=2070;DPB=2070;DPRA=1.54687;EPP=3.51141;EPPR=5.47487;GTI=1;LEN=1;MEANALT=1;MQM=59.7949;MQMR=59.93;NS=92;NUMALT=1;ODDS=3.19475;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1414;QR=74585;RO=2030;RPP=87.6977;RPPR=4376.42;RUN=1;SAF=18;SAP=3.51141;SAR=21;SRF=1043;SRP=6.36485;SRR=987;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:38.2664:10:10:361:0:0:0,-3.0103,-10 0/0:53.3179:15:15:524:0:0:0,-4.51545,-10 0/0:71.3797:21:21:760:0:0:0,-6.32163,-10 0/1:0.0497416:13:0:0:13:459:-10,-3.91339,0 0/0:59.3385:17:17:633:0:0:0,-5.11751,-10 0/0:50.3076:14:14:505:0:0:0,-4.21442,-10 0/0:99:47:47:1693:0:0:0,-10,-10 0/0:86.4309:26:26:934:0:0:0,-7.82678,-10 0/0:47.2973:13:13:491:0:0:0,-3.91339,-10 0/0:32.2458:8:8:301:0:0:0,-2.40824,-10 0/0:38.2664:10:10:378:0:0:0,-3.0103,-10 0/0:32.2458:8:8:303:0:0:0,-2.40824,-10 0/0:99:32:32:1188:0:0:0,-9.63296,-10 0/0:92.4523:28:28:999:0:0:0,-8.42884,-10 0/0:99:35:35:1291:0:0:0,-10,-10 0/0:74.3899:22:22:788:0:0:0,-6.62266,-10 0/0:77.4002:23:23:852:0:0:0,-6.92369,-10 0/0:47.2973:13:13:478:0:0:0,-3.91339,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:99:49:49:1834:0:0:0,-10,-10 0/0:62.3488:18:18:657:0:0:0,-5.41854,-10 0/0:92.4523:28:28:1041:0:0:0,-8.42884,-10 0/0:44.287:12:12:425:0:0:0,-3.61236,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:83.4207:25:25:916:0:0:0,-7.52575,-10 0/0:99:37:37:1372:0:0:0,-10,-10 0/0:62.3488:18:18:683:0:0:0,-5.41854,-10 0/0:65.3591:19:19:720:0:0:0,-5.71957,-10 0/0:83.4207:25:25:948:0:0:0,-7.52575,-10 0/0:99:44:43:1580:1:24:0,-9.20187,-10 0/0:38.2664:10:10:370:0:0:0,-3.0103,-10 0/0:23.2149:5:5:186:0:0:0,-1.50515,-10 0/0:83.4207:25:25:899:0:0:0,-7.52575,-10 0/0:47.2973:13:13:485:0:0:0,-3.91339,-10 0/0:71.3797:21:21:779:0:0:0,-6.32163,-10 0/0:32.2458:8:8:302:0:0:0,-2.40824,-10 0/0:50.3076:14:14:517:0:0:0,-4.21442,-10 0/0:56.9583:32:31:1142:1:37:0,-4.42781,-10 0/0:80.4105:24:24:882:0:0:0,-7.22472,-10 0/0:47.2973:13:13:479:0:0:0,-3.91339,-10 0/0:99:43:43:1506:0:0:0,-10,-10 0/0:74.3899:22:22:835:0:0:0,-6.62266,-10 0/0:65.3591:19:19:695:0:0:0,-5.71957,-10 0/0:83.0448:42:41:1476:1:38:0,-7.22001,-10 0/0:92.4523:28:28:1028:0:0:0,-8.42884,-10 0/0:74.3899:22:22:830:0:0:0,-6.62266,-10 0/0:99:53:53:1945:0:0:0,-10,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:56.3282:16:16:602:0:0:0,-4.81648,-10 0/0:99:39:39:1436:0:0:0,-10,-10 0/0:53.3179:15:15:563:0:0:0,-4.51545,-10 0/0:99:39:39:1454:0:0:0,-10,-10 0/0:59.3385:17:17:594:0:0:0,-5.11751,-10 0/0:29.2355:7:7:253:0:0:0,-2.10721,-10 0/0:99:42:42:1499:0:0:0,-10,-10 0/0:53.3179:15:15:549:0:0:0,-4.51545,-10 0/0:92.4523:28:28:1055:0:0:0,-8.42884,-10 0/0:41.2767:11:11:390:0:0:0,-3.31133,-10 0/0:86.4309:26:26:952:0:0:0,-7.82678,-10 0/0:65.3591:19:19:691:0:0:0,-5.71957,-10 0/0:99:39:39:1423:0:0:0,-10,-10 0/0:56.3282:16:16:605:0:0:0,-4.81648,-10 0/1:99:38:15:549:23:856:-10,0,-10 0/0:53.3179:16:15:570:0:0:0,-4.51545,-10 0/0:65.3591:19:19:670:0:0:0,-5.71957,-10 0/0:99:40:40:1489:0:0:0,-10,-10 0/0:56.3282:16:16:606:0:0:0,-4.81648,-10 0/0:62.3488:18:18:676:0:0:0,-5.41854,-10 0/0:99:36:36:1301:0:0:0,-10,-10 0/0:53.3179:15:15:568:0:0:0,-4.51545,-10 0/0:80.4105:24:24:903:0:0:0,-7.22472,-10 0/0:74.3899:22:22:792:0:0:0,-6.62266,-10 0/0:68.3694:20:20:733:0:0:0,-6.0206,-10 0/0:74.3899:22:22:831:0:0:0,-6.62266,-10 0/0:89.4409:27:27:960:0:0:0,-8.12781,-10 0/0:62.3488:18:18:682:0:0:0,-5.41854,-10 0/0:56.3282:16:16:600:0:0:0,-4.81648,-10 0/0:68.3694:20:20:741:0:0:0,-6.0206,-10 0/0:23.2149:5:5:190:0:0:0,-1.50515,-10 0/0:23.2149:5:5:137:0:0:0,-1.50515,-10 0/0:99:41:41:1538:0:0:0,-10,-10 0/0:99:36:36:1343:0:0:0,-10,-10 0/0:92.4523:28:28:1027:0:0:0,-8.42884,-10 0/0:83.4207:25:25:924:0:0:0,-7.52575,-10 0/0:65.3591:19:19:695:0:0:0,-5.71957,-10 0/0:29.2355:7:7:265:0:0:0,-2.10721,-10 0/0:71.3797:21:21:766:0:0:0,-6.32163,-10 0/0:47.2973:13:13:482:0:0:0,-3.91339,-10 0/0:14.184:2:2:69:0:0:0,-0.60206,-6.555 0/0:53.3179:15:15:548:0:0:0,-4.51545,-10 0/0:71.3797:21:21:752:0:0:0,-6.32163,-10 0/0:53.3179:15:15:556:0:0:0,-4.51545,-10 scaffold_56 3038415 . T C 2760.85 . AB=0.60221;ABP=19.4343;AC=9;AF=0.048913;AN=184;AO=112;CIGAR=1X;DP=1949;DPB=1949;DPRA=0.927367;EPP=3.08785;EPPR=5.09889;GTI=4;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.208951;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3913;QR=66768;RO=1834;RPP=246.215;RPPR=3985.49;RUN=1;SAF=55;SAP=3.08785;SAR=57;SRF=938;SRP=5.09889;SRR=896;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.4419:13:13:492:0:0:0,-3.91339,-10 0/0:63.4728:16:16:606:0:0:0,-4.81648,-10 0/0:72.5037:19:19:695:0:0:0,-5.71957,-10 0/0:66.4831:17:17:609:0:0:0,-5.11751,-10 0/1:55.3496:8:6:205:2:76:-6.25892,0,-10 0/0:51.4316:12:12:441:0:0:0,-3.61236,-10 0/0:99:34:34:1226:0:0:0,-10,-10 0/1:99:34:13:462:21:785:-10,0,-10 0/0:90.5642:25:25:905:0:0:0,-7.52575,-10 0/0:2.13063:7:6:225:1:27:-1.43789,0,-10 0/1:0.0316186:10:0:0:10:317:-10,-3.0103,0 0/1:0.00196944:6:0:0:6:205:-10,-1.80618,0 0/1:99:28:13:484:15:531:-10,0,-10 0/0:99:29:29:974:0:0:0,-8.72987,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:99:42:42:1573:0:0:0,-10,-10 0/1:99:19:8:287:11:381:-10,0,-10 0/0:60.4625:16:15:527:0:0:0,-4.51545,-10 0/0:78.5243:21:21:788:0:0:0,-6.32163,-10 0/0:99:32:32:1194:0:0:0,-9.63296,-10 0/0:72.5037:19:19:719:0:0:0,-5.71957,-10 0/0:99:29:29:993:0:0:0,-8.72987,-10 0/0:30.3595:5:5:188:0:0:0,-1.50515,-10 0/0:90.5642:25:25:913:0:0:0,-7.52575,-10 0/0:63.4728:16:16:607:0:0:0,-4.81648,-10 0/0:90.5642:26:25:931:0:0:0,-7.52575,-10 0/0:57.4522:14:14:526:0:0:0,-4.21442,-10 0/0:57.4522:14:14:518:0:0:0,-4.21442,-10 0/0:81.5346:22:22:804:0:0:0,-6.62266,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:27.3492:4:4:138:0:0:0,-1.20412,-10 0/0:30.3595:5:5:162:0:0:0,-1.50515,-10 0/0:90.5642:25:25:929:0:0:0,-7.52575,-10 0/0:60.4625:15:15:536:0:0:0,-4.51545,-10 0/0:81.5346:22:22:827:0:0:0,-6.62266,-10 0/0:36.3801:7:7:265:0:0:0,-2.10721,-10 0/0:42.4007:9:9:303:0:0:0,-2.70927,-10 0/0:90.5642:25:25:913:0:0:0,-7.52575,-10 0/0:87.5546:24:24:903:0:0:0,-7.22472,-10 0/0:54.4419:13:13:469:0:0:0,-3.91339,-10 0/0:99:35:35:1287:0:0:0,-10,-10 0/0:75.514:20:20:758:0:0:0,-6.0206,-10 0/0:96.5809:27:27:994:0:0:0,-8.12781,-10 0/0:99:37:37:1330:0:0:0,-10,-10 0/0:84.5446:23:23:819:0:0:0,-6.92369,-10 0/0:81.5346:22:22:800:0:0:0,-6.62266,-10 0/0:99:47:47:1686:0:0:0,-10,-10 0/1:99:25:14:520:11:363:-10,0,-10 0/0:66.4831:17:17:606:0:0:0,-5.11751,-10 0/0:99:41:41:1443:0:0:0,-10,-10 0/0:54.4419:13:13:487:0:0:0,-3.91339,-10 0/0:99:35:35:1270:0:0:0,-10,-10 0/0:63.4728:16:16:582:0:0:0,-4.81648,-10 0/0:24.3389:3:3:114:0:0:0,-0.90309,-10 0/0:99:46:46:1663:0:0:0,-10,-10 0/1:0.535794:14:0:0:14:515:-10,-4.21442,0 0/0:84.5446:23:23:848:0:0:0,-6.92369,-10 0/0:39.3904:8:8:280:0:0:0,-2.40824,-10 0/0:63.4728:16:16:576:0:0:0,-4.81648,-10 0/0:57.4522:15:14:502:0:0:0,-4.21442,-10 0/0:99:33:33:1208:0:0:0,-9.93399,-10 0/0:84.5446:23:23:856:0:0:0,-6.92369,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:69.4934:18:18:684:0:0:0,-5.41854,-10 0/0:60.4625:15:15:568:0:0:0,-4.51545,-10 0/1:99:37:18:674:19:650:-10,0,-10 0/0:96.5809:27:27:961:0:0:0,-8.12781,-10 0/0:54.4419:13:13:399:0:0:0,-3.91339,-10 0/0:25.868:30:28:1040:2:63:0,-0.407411,-10 0/0:51.4316:12:12:456:0:0:0,-3.61236,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:99:30:30:1067:0:0:0,-9.0309,-10 0/0:99:31:31:1136:0:0:0,-9.33193,-10 0/0:60.4625:15:15:509:0:0:0,-4.51545,-10 0/0:84.5446:23:23:845:0:0:0,-6.92369,-10 0/0:63.4728:16:16:581:0:0:0,-4.81648,-10 0/0:78.5243:21:21:736:0:0:0,-6.32163,-10 0/0:45.411:10:10:369:0:0:0,-3.0103,-10 0/0:42.4007:9:9:309:0:0:0,-2.70927,-10 0/0:42.4007:9:9:338:0:0:0,-2.70927,-10 0/0:99:36:36:1321:0:0:0,-10,-10 0/0:99:36:36:1350:0:0:0,-10,-10 0/0:96.5809:27:27:995:0:0:0,-8.12781,-10 0/0:78.5243:21:21:772:0:0:0,-6.32163,-10 0/0:48.4213:11:11:383:0:0:0,-3.31133,-10 0/0:45.411:10:10:373:0:0:0,-3.0103,-10 0/0:96.5809:27:27:966:0:0:0,-8.12781,-10 0/0:81.5346:22:22:804:0:0:0,-6.62266,-10 0/0:42.4007:9:9:319:0:0:0,-2.70927,-10 0/0:84.5446:23:23:810:0:0:0,-6.92369,-10 0/0:78.5243:21:21:770:0:0:0,-6.32163,-10 0/0:60.4625:15:15:536:0:0:0,-4.51545,-10 scaffold_56 3038422 . C A 5209.11 . AB=0.559322;ABP=10.224;AC=16;AF=0.0869565;AN=184;AO=189;CIGAR=1X;DP=1948;DPB=1948;DPRA=1.07585;EPP=3.57327;EPPR=4.04851;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=1.52585;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6990;QR=63328;RO=1759;RPP=413.419;RPPR=3822.63;RUN=1;SAF=98;SAP=3.57327;SAR=91;SRF=894;SRP=4.04851;SRR=865;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:42.6292:13:13:484:0:0:0,-3.91339,-10 0/0:51.6601:16:16:585:0:0:0,-4.81648,-10 0/0:60.691:19:19:692:0:0:0,-5.71957,-10 0/0:54.6704:17:17:621:0:0:0,-5.11751,-10 0/0:27.5777:8:8:297:0:0:0,-2.40824,-10 0/0:39.6189:12:12:448:0:0:0,-3.61236,-10 0/0:99:34:34:1212:0:0:0,-10,-10 0/0:99:34:34:1261:0:0:0,-10,-10 0/0:78.7527:25:25:881:0:0:0,-7.52575,-10 0/0:24.5674:7:7:231:0:0:0,-2.10721,-10 0/0:33.5983:10:10:372:0:0:0,-3.0103,-10 0/0:21.5571:6:6:209:0:0:0,-1.80618,-10 0/1:99:28:15:529:13:492:-10,0,-10 0/1:99:29:9:297:20:718:-10,0,-10 0/0:99:36:36:1305:0:0:0,-10,-10 0/0:99:42:42:1529:0:0:0,-10,-10 0/0:60.691:19:19:679:0:0:0,-5.71957,-10 0/0:51.6601:16:16:568:0:0:0,-4.81648,-10 0/1:99:21:13:480:8:291:-10,0,-10 0/0:99:32:32:1135:0:0:0,-9.63296,-10 0/0:60.691:19:19:703:0:0:0,-5.71957,-10 0/0:90.7931:29:29:987:0:0:0,-8.72987,-10 0/1:0.71039:5:0:0:5:184:-10,-1.50515,0 0/0:78.7527:25:25:929:0:0:0,-7.52575,-10 1/1:30.1014:16:0:0:16:606:-10,-4.81648,0 0/0:81.763:26:26:889:0:0:0,-7.82678,-10 0/0:45.6395:14:14:507:0:0:0,-4.21442,-10 1/1:24.0808:14:0:0:14:520:-10,-4.21442,0 0/0:69.7219:22:22:802:0:0:0,-6.62266,-10 0/0:99:34:34:1250:0:0:0,-10,-10 0/1:0.340686:4:0:0:4:142:-10,-1.20412,0 0/0:18.5468:5:5:161:0:0:0,-1.50515,-10 0/0:78.7527:25:25:918:0:0:0,-7.52575,-10 0/0:48.6498:15:15:528:0:0:0,-4.51545,-10 0/0:66.7116:21:21:770:0:0:0,-6.32163,-10 0/0:24.5674:7:7:224:0:0:0,-2.10721,-10 0/0:30.588:9:9:322:0:0:0,-2.70927,-10 0/0:78.7527:25:25:931:0:0:0,-7.52575,-10 0/0:75.7425:24:24:871:0:0:0,-7.22472,-10 0/0:42.6292:13:13:462:0:0:0,-3.91339,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:63.7013:20:20:755:0:0:0,-6.0206,-10 1/1:63.2147:27:0:0:27:1015:-10,-8.12781,0 0/0:99:37:37:1337:0:0:0,-10,-10 0/0:72.7322:23:23:826:0:0:0,-6.92369,-10 0/1:99:22:5:168:17:607:-10,0,-10 0/1:99:47:32:1150:15:568:-10,0,-10 0/0:78.7527:25:25:925:0:0:0,-7.52575,-10 0/0:54.6704:17:17:602:0:0:0,-5.11751,-10 0/1:99:41:19:680:22:829:-10,0,-10 0/0:42.6292:13:13:464:0:0:0,-3.91339,-10 0/0:99:35:35:1179:0:0:0,-10,-10 0/0:51.6601:16:16:578:0:0:0,-4.81648,-10 0/1:0.167003:3:0:0:3:114:-10,-0.90309,0 0/0:99:46:46:1663:0:0:0,-10,-10 0/0:45.6395:14:14:524:0:0:0,-4.21442,-10 0/0:72.7322:23:23:814:0:0:0,-6.92369,-10 0/0:27.5777:8:8:303:0:0:0,-2.40824,-10 0/0:51.6601:16:16:570:0:0:0,-4.81648,-10 0/0:48.6498:15:15:552:0:0:0,-4.51545,-10 0/0:99:33:33:1158:0:0:0,-9.93399,-10 0/0:72.7322:23:23:810:0:0:0,-6.92369,-10 0/0:93.8025:30:30:1091:0:0:0,-9.0309,-10 0/0:57.6807:18:18:676:0:0:0,-5.41854,-10 0/0:48.6498:15:15:555:0:0:0,-4.51545,-10 0/0:99:37:37:1296:0:0:0,-10,-10 0/0:84.7735:27:27:978:0:0:0,-8.12781,-10 0/0:42.6292:13:13:420:0:0:0,-3.91339,-10 0/0:93.8025:30:30:1098:0:0:0,-9.0309,-10 0/0:39.6189:12:12:432:0:0:0,-3.61236,-10 0/0:90.7931:29:29:1055:0:0:0,-8.72987,-10 0/0:93.8025:30:30:1103:0:0:0,-9.0309,-10 0/0:96.8157:31:31:1072:0:0:0,-9.33193,-10 0/0:48.6498:15:15:546:0:0:0,-4.51545,-10 0/0:72.7322:23:23:857:0:0:0,-6.92369,-10 0/0:51.6601:16:16:547:0:0:0,-4.81648,-10 0/0:66.7116:21:21:731:0:0:0,-6.32163,-10 0/0:33.5983:10:10:373:0:0:0,-3.0103,-10 0/0:30.588:9:9:333:0:0:0,-2.70927,-10 0/0:30.588:9:9:333:0:0:0,-2.70927,-10 0/0:99:36:36:1307:0:0:0,-10,-10 0/1:99:36:11:402:25:904:-10,0,-10 0/0:84.7735:27:27:974:0:0:0,-8.12781,-10 0/0:66.7116:21:21:758:0:0:0,-6.32163,-10 0/0:36.6086:11:11:406:0:0:0,-3.31133,-10 0/0:33.5983:10:10:360:0:0:0,-3.0103,-10 0/0:84.7735:27:27:932:0:0:0,-8.12781,-10 0/0:69.7219:22:22:786:0:0:0,-6.62266,-10 0/0:30.588:9:9:336:0:0:0,-2.70927,-10 0/0:72.7322:23:23:854:0:0:0,-6.92369,-10 0/0:66.7116:21:21:778:0:0:0,-6.32163,-10 0/0:48.6498:15:15:524:0:0:0,-4.51545,-10 scaffold_56 3041304 . C T 1117.45 . AB=0.438776;ABP=6.20103;AC=4;AF=0.0217391;AN=184;AO=45;CIGAR=1X;DP=1811;DPB=1811;DPRA=1.05355;EPP=3.05855;EPPR=3.50214;GTI=1;LEN=1;MEANALT=1;MQM=59.0667;MQMR=59.9485;NS=92;NUMALT=1;ODDS=3.90387;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1599;QR=63748;RO=1766;RPP=100.727;RPPR=3829.15;RUN=1;SAF=22;SAP=3.05855;SAR=23;SRF=872;SRP=3.60543;SRR=894;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.019:13:13:471:0:0:0,-3.91339,-10 0/0:57.0087:12:12:441:0:0:0,-3.61236,-10 0/0:99:28:28:975:0:0:0,-8.42884,-10 0/0:57.0087:12:12:425:0:0:0,-3.61236,-10 0/0:60.019:13:13:492:0:0:0,-3.91339,-10 0/0:66.0396:15:15:542:0:0:0,-4.51545,-10 0/0:99:41:41:1519:0:0:0,-10,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:47.9778:9:9:326:0:0:0,-2.70927,-10 0/0:35.9366:5:5:183:0:0:0,-1.50515,-10 0/0:32.9263:4:4:139:0:0:0,-1.20412,-10 0/0:44.9675:8:8:300:0:0:0,-2.40824,-10 0/0:99:31:31:1171:0:0:0,-9.33193,-10 0/0:99:38:38:1372:0:0:0,-10,-10 0/1:99:27:17:606:10:372:-10,0,-10 0/1:99:26:13:475:13:468:-10,0,-10 0/0:96.1402:25:25:904:0:0:0,-7.52575,-10 0/0:0.0861284:5:4:151:1:14:-0.59382,0,-10 0/0:96.1402:25:25:884:0:0:0,-7.52575,-10 0/0:99:36:36:1325:0:0:0,-10,-10 0/0:60.019:13:13:487:0:0:0,-3.91339,-10 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:35.9366:5:5:164:0:0:0,-1.50515,-10 0/0:99:28:28:1037:0:0:0,-8.42884,-10 0/0:57.0087:12:12:419:0:0:0,-3.61236,-10 0/0:99:26:26:926:0:0:0,-7.82678,-10 0/0:84.1013:21:21:787:0:0:0,-6.32163,-10 0/0:66.0396:15:15:538:0:0:0,-4.51545,-10 0/0:99:26:26:981:0:0:0,-7.82678,-10 0/0:78.0808:19:19:716:0:0:0,-5.71957,-10 0/0:35.9366:5:5:190:0:0:0,-1.50515,-10 0/0:60.019:13:13:445:0:0:0,-3.91339,-10 0/0:50.9881:10:10:356:0:0:0,-3.0103,-10 0/0:60.019:13:13:458:0:0:0,-3.91339,-10 0/0:84.1013:21:21:783:0:0:0,-6.32163,-10 0/0:50.9881:10:10:376:0:0:0,-3.0103,-10 0/0:53.9984:11:11:388:0:0:0,-3.31133,-10 0/0:99:32:32:1164:0:0:0,-9.63296,-10 0/0:63.0293:14:14:523:0:0:0,-4.21442,-10 0/0:81.091:20:20:662:0:0:0,-6.0206,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:69.0499:16:16:578:0:0:0,-4.81648,-10 0/0:90.1214:23:23:790:0:0:0,-6.92369,-10 0/0:99:26:26:934:0:0:0,-7.82678,-10 0/0:99:28:28:1037:0:0:0,-8.42884,-10 0/0:87.1114:22:22:818:0:0:0,-6.62266,-10 0/0:99:39:39:1392:0:0:0,-10,-10 0/0:93.1311:24:24:864:0:0:0,-7.22472,-10 0/0:66.0396:15:15:523:0:0:0,-4.51545,-10 0/0:99:43:43:1479:0:0:0,-10,-10 0/0:69.0499:16:16:595:0:0:0,-4.81648,-10 0/0:87.1114:22:22:765:0:0:0,-6.62266,-10 0/0:53.9984:11:11:393:0:0:0,-3.31133,-10 0/0:29.916:3:3:104:0:0:0,-0.90309,-9.70667 0/0:99:40:40:1478:0:0:0,-10,-10 0/0:50.9881:10:10:374:0:0:0,-3.0103,-10 0/0:96.1402:25:25:912:0:0:0,-7.52575,-10 0/0:78.0808:19:19:693:0:0:0,-5.71957,-10 0/0:60.019:13:13:469:0:0:0,-3.91339,-10 0/0:60.019:13:13:494:0:0:0,-3.91339,-10 0/0:96.1402:25:25:899:0:0:0,-7.52575,-10 0/0:75.0705:18:18:663:0:0:0,-5.41854,-10 0/0:99:36:36:1268:0:0:0,-10,-10 0/0:69.0499:16:16:557:0:0:0,-4.81648,-10 0/0:75.0705:18:18:618:0:0:0,-5.41854,-10 0/0:99:39:39:1398:0:0:0,-10,-10 0/0:99:26:26:871:0:0:0,-7.82678,-10 0/0:63.0293:14:14:492:0:0:0,-4.21442,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/0:53.9984:11:11:407:0:0:0,-3.31133,-10 0/0:60.019:13:13:494:0:0:0,-3.91339,-10 0/0:96.1402:25:25:897:0:0:0,-7.52575,-10 0/0:59.0017:21:20:741:1:14:0,-3.59941,-10 0/0:57.0087:12:12:403:0:0:0,-3.61236,-10 0/0:99:27:27:1015:0:0:0,-8.12781,-10 0/0:47.9778:9:9:301:0:0:0,-2.70927,-10 0/0:69.0499:16:16:574:0:0:0,-4.81648,-10 0/0:47.9778:9:9:322:0:0:0,-2.70927,-10 0/0:23.8954:1:1:38:0:0:0,-0.30103,-3.8 0/0:78.0808:19:19:689:0:0:0,-5.71957,-10 0/0:99:39:39:1347:0:0:0,-10,-10 0/0:99:28:28:995:0:0:0,-8.42884,-10 0/1:99:20:10:378:10:380:-10,0,-10 0/0:63.0293:14:14:489:0:0:0,-4.21442,-10 0/0:78.0808:19:19:669:0:0:0,-5.71957,-10 0/0:66.0396:15:15:518:0:0:0,-4.51545,-10 0/0:57.0087:12:12:441:0:0:0,-3.61236,-10 0/0:57.0087:12:12:449:0:0:0,-3.61236,-10 0/0:57.0087:12:12:449:0:0:0,-3.61236,-10 0/0:99:27:27:951:0:0:0,-8.12781,-10 0/1:99:25:15:542:10:351:-10,0,-10 0/0:60.019:13:13:493:0:0:0,-3.91339,-10 scaffold_56 3041305 . C T 15424.8 . AB=0.516995;ABP=4.41263;AC=51;AF=0.277174;AN=184;AO=538;CIGAR=1X;DP=1811;DPB=1811;DPRA=1.26891;EPP=3.26862;EPPR=3.25613;GTI=1;LEN=1;MEANALT=1;MQM=59.9275;MQMR=59.9261;NS=92;NUMALT=1;ODDS=0.0455833;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=19933;QR=46133;RO=1272;RPP=1171.26;RPPR=2756.44;RUN=1;SAF=265;SAP=3.26862;SAR=273;SRF=629;SRP=3.3449;SRR=643;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.9627:13:13:465:0:0:0,-3.91339,-10 0/0:38.9524:12:12:410:0:0:0,-3.61236,-10 0/0:87.117:28:28:994:0:0:0,-8.42884,-10 0/0:38.9524:12:12:428:0:0:0,-3.61236,-10 0/1:99:13:3:113:10:370:-10,0,-9.08964 1/1:40.3422:15:0:0:15:562:-10,-4.51545,0 0/0:99:41:41:1525:0:0:0,-10,-10 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:29.9215:9:9:323:0:0:0,-2.70927,-10 0/0:17.8803:5:5:167:0:0:0,-1.50515,-10 0/1:1.4623:4:0:0:4:152:-10,-1.20412,0 1/1:19.2701:8:0:0:8:271:-10,-2.40824,0 0/1:99:31:16:533:15:570:-10,0,-10 0/0:99:38:38:1375:0:0:0,-10,-10 0/0:84.1068:27:27:985:0:0:0,-8.12781,-10 0/0:81.0965:26:26:958:0:0:0,-7.82678,-10 1/1:70.4452:25:0:0:25:940:-10,-7.52575,0 0/0:17.8803:5:5:167:0:0:0,-1.50515,-10 0/0:78.0862:25:25:894:0:0:0,-7.52575,-10 0/1:99:36:12:431:24:890:-10,0,-10 0/1:99:13:8:304:5:190:-10,0,-10 1/1:76.4658:27:0:0:27:1021:-10,-8.12781,0 0/0:17.8803:5:5:176:0:0:0,-1.50515,-10 0/0:87.117:28:28:1041:0:0:0,-8.42884,-10 0/0:38.9524:12:12:453:0:0:0,-3.61236,-10 0/0:81.0965:26:26:936:0:0:0,-7.82678,-10 0/0:66.0451:21:21:762:0:0:0,-6.32163,-10 0/0:47.9833:15:15:554:0:0:0,-4.51545,-10 1/1:73.4555:26:0:0:26:988:-10,-7.82678,0 0/1:99:19:7:217:12:456:-10,0,-10 0/0:17.8803:5:5:189:0:0:0,-1.50515,-10 0/0:41.9627:13:13:441:0:0:0,-3.91339,-10 1/1:25.2907:10:0:0:10:377:-10,-3.0103,0 1/1:34.3216:13:0:0:13:492:-10,-3.91339,0 1/1:58.404:21:0:0:21:787:-10,-6.32163,0 0/0:32.9318:10:10:380:0:0:0,-3.0103,-10 0/0:35.9421:11:11:388:0:0:0,-3.31133,-10 0/1:99:32:15:533:17:623:-10,0,-10 1/1:37.3319:14:0:0:14:519:-10,-4.21442,0 0/1:99:20:12:408:8:295:-10,0,-10 0/1:99:31:10:368:21:795:-10,0,-10 1/1:43.3525:16:0:0:16:589:-10,-4.81648,0 0/0:69.0554:23:22:807:0:0:0,-6.62266,-10 0/1:99:26:12:454:14:486:-10,0,-10 0/1:99:28:15:490:13:494:-10,0,-10 0/1:99:22:12:452:10:364:-10,0,-10 0/1:99:39:20:706:19:698:-10,0,-10 0/0:75.0759:24:24:902:0:0:0,-7.22472,-10 0/0:47.9833:15:15:532:0:0:0,-4.51545,-10 0/1:99:43:21:708:22:807:-10,0,-10 0/0:50.9936:16:16:572:0:0:0,-4.81648,-10 0/1:99:22:8:300:14:519:-10,0,-10 0/0:35.9421:11:11:409:0:0:0,-3.31133,-10 0/0:11.8597:3:3:109:0:0:0,-0.90309,-10 0/1:99:40:21:767:19:718:-10,0,-10 0/0:32.9318:10:10:375:0:0:0,-3.0103,-10 0/0:78.0862:25:25:892:0:0:0,-7.52575,-10 0/0:60.0245:19:19:712:0:0:0,-5.71957,-10 0/0:41.9627:13:13:479:0:0:0,-3.91339,-10 1/1:34.3216:13:0:0:13:488:-10,-3.91339,0 0/1:99:25:11:394:14:493:-10,0,-10 1/1:49.3731:18:0:0:18:655:-10,-5.41854,0 0/0:99:36:36:1319:0:0:0,-10,-10 0/1:99:16:7:262:9:342:-10,0,-10 0/0:57.0142:18:18:653:0:0:0,-5.41854,-10 0/1:99:39:22:802:17:628:-10,0,-10 0/1:99:26:17:606:9:333:-10,0,-10 0/0:44.973:14:14:497:0:0:0,-4.21442,-10 0/1:99:34:21:770:13:493:-10,0,-10 1/1:28.301:11:0:0:11:387:-10,-3.31133,0 0/0:41.9627:13:13:494:0:0:0,-3.91339,-10 0/0:78.0862:25:25:933:0:0:0,-7.52575,-10 0/0:66.0451:21:21:738:0:0:0,-6.32163,-10 0/0:38.9524:12:12:429:0:0:0,-3.61236,-10 0/0:84.1068:27:27:1007:0:0:0,-8.12781,-10 0/0:29.9215:9:9:319:0:0:0,-2.70927,-10 0/0:50.9936:16:16:596:0:0:0,-4.81648,-10 0/0:29.9215:9:9:333:0:0:0,-2.70927,-10 0/0:5.8389:1:1:38:0:0:0,-0.30103,-3.8 0/0:60.0245:19:19:719:0:0:0,-5.71957,-10 0/0:99:39:39:1390:0:0:0,-10,-10 0/0:87.117:28:28:1012:0:0:0,-8.42884,-10 0/0:63.0348:20:20:756:0:0:0,-6.0206,-10 0/0:44.973:14:14:490:0:0:0,-4.21442,-10 1/1:52.3834:19:0:0:19:671:-10,-5.71957,0 0/0:47.9833:15:15:536:0:0:0,-4.51545,-10 0/0:38.9524:12:12:442:0:0:0,-3.61236,-10 1/1:31.3113:12:0:0:12:454:-10,-3.61236,0 0/0:38.9524:12:12:454:0:0:0,-3.61236,-10 0/0:56.8926:27:26:927:1:16:0,-5.09645,-10 0/0:78.0862:25:25:939:0:0:0,-7.52575,-10 0/0:41.9627:13:13:493:0:0:0,-3.91339,-10 scaffold_56 3041318 . A C 1128.09 . AB=0.428571;ABP=7.35324;AC=4;AF=0.0217391;AN=184;AO=42;CIGAR=1X;DP=1812;DPB=1812;DPRA=1.25788;EPP=4.87156;EPPR=3.90617;GTI=0;LEN=1;MEANALT=1;MQM=59;MQMR=59.9564;NS=92;NUMALT=1;ODDS=5.70434;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1563;QR=64613;RO=1767;RPP=85.7331;RPPR=3152.94;RUN=1;SAF=19;SAP=3.83753;SAR=23;SRF=872;SRP=3.66039;SRR=895;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.9212:13:13:475:0:0:0,-3.91339,-10 0/0:57.9109:12:12:449:0:0:0,-3.61236,-10 0/0:99:28:28:996:0:0:0,-8.42884,-10 0/0:57.9109:12:12:430:0:0:0,-3.61236,-10 0/0:60.9212:13:13:488:0:0:0,-3.91339,-10 0/0:66.9418:15:15:562:0:0:0,-4.51545,-10 0/0:99:41:41:1534:0:0:0,-10,-10 0/0:99:33:33:1235:0:0:0,-9.93399,-10 0/0:48.88:9:9:327:0:0:0,-2.70927,-10 0/0:36.8388:5:5:189:0:0:0,-1.50515,-10 0/0:33.8285:4:4:142:0:0:0,-1.20412,-10 0/0:45.8697:8:8:297:0:0:0,-2.40824,-10 0/0:99:31:31:1118:0:0:0,-9.33193,-10 0/0:99:38:38:1349:0:0:0,-10,-10 0/1:99:27:17:604:10:374:-10,0,-10 0/1:99:26:14:497:12:445:-10,0,-10 0/0:97.0434:25:25:925:0:0:0,-7.52575,-10 0/0:36.8388:5:5:146:0:0:0,-1.50515,-10 0/0:97.0434:25:25:898:0:0:0,-7.52575,-10 0/0:99:36:36:1285:0:0:0,-10,-10 0/0:63.9315:14:14:531:0:0:0,-4.21442,-10 0/0:99:27:27:1024:0:0:0,-8.12781,-10 0/0:36.8388:5:5:190:0:0:0,-1.50515,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:57.9109:12:12:438:0:0:0,-3.61236,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:85.0035:21:21:763:0:0:0,-6.32163,-10 0/0:66.9418:15:15:565:0:0:0,-4.51545,-10 0/0:99:26:26:985:0:0:0,-7.82678,-10 0/0:78.983:19:19:696:0:0:0,-5.71957,-10 0/0:36.8388:5:5:185:0:0:0,-1.50515,-10 0/0:60.9212:13:13:479:0:0:0,-3.91339,-10 0/0:51.8903:10:10:377:0:0:0,-3.0103,-10 0/0:60.9212:13:13:487:0:0:0,-3.91339,-10 0/0:85.0035:21:21:754:0:0:0,-6.32163,-10 0/0:51.8903:10:10:364:0:0:0,-3.0103,-10 0/0:54.9006:11:11:407:0:0:0,-3.31133,-10 0/0:99:32:32:1156:0:0:0,-9.63296,-10 0/0:63.9315:14:14:514:0:0:0,-4.21442,-10 0/0:78.983:20:19:685:0:0:0,-5.71957,-10 0/0:99:31:31:1157:0:0:0,-9.33193,-10 0/0:69.9521:16:16:573:0:0:0,-4.81648,-10 0/0:91.0238:23:23:841:0:0:0,-6.92369,-10 0/0:99:26:26:930:0:0:0,-7.82678,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:88.0137:22:22:792:0:0:0,-6.62266,-10 0/0:99:39:39:1439:0:0:0,-10,-10 0/0:94.0338:24:24:881:0:0:0,-7.22472,-10 0/0:66.9418:15:15:566:0:0:0,-4.51545,-10 0/0:99:43:43:1494:0:0:0,-10,-10 0/0:69.9521:16:16:585:0:0:0,-4.81648,-10 0/0:88.0137:22:22:810:0:0:0,-6.62266,-10 0/0:54.9006:11:11:413:0:0:0,-3.31133,-10 0/0:30.8182:3:3:112:0:0:0,-0.90309,-10 0/0:99:40:39:1441:0:0:0,-10,-10 0/0:51.8903:10:10:374:0:0:0,-3.0103,-10 0/0:97.0434:25:25:919:0:0:0,-7.52575,-10 0/0:78.983:19:19:688:0:0:0,-5.71957,-10 0/0:60.9212:13:13:475:0:0:0,-3.91339,-10 0/0:60.9212:13:13:491:0:0:0,-3.91339,-10 0/0:97.0434:25:25:910:0:0:0,-7.52575,-10 0/0:75.9727:18:18:609:0:0:0,-5.41854,-10 0/0:99:36:36:1279:0:0:0,-10,-10 0/0:69.9521:16:16:576:0:0:0,-4.81648,-10 0/0:75.9727:18:18:680:0:0:0,-5.41854,-10 0/0:99:39:39:1432:0:0:0,-10,-10 0/0:99:26:26:926:0:0:0,-7.82678,-10 0/0:63.9315:14:14:502:0:0:0,-4.21442,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:54.9006:11:11:409:0:0:0,-3.31133,-10 0/0:60.9212:13:13:464:0:0:0,-3.91339,-10 0/0:97.0434:25:25:922:0:0:0,-7.52575,-10 0/0:85.0035:21:21:775:0:0:0,-6.32163,-10 0/0:57.9109:12:12:448:0:0:0,-3.61236,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:48.88:9:9:313:0:0:0,-2.70927,-10 0/0:69.9521:16:16:580:0:0:0,-4.81648,-10 0/0:48.88:9:9:333:0:0:0,-2.70927,-10 0/0:24.7976:1:1:35:0:0:0,-0.30103,-3.5 0/0:78.983:19:19:710:0:0:0,-5.71957,-10 0/0:99:39:39:1448:0:0:0,-10,-10 0/0:99:28:28:966:0:0:0,-8.42884,-10 0/1:99:20:10:370:10:380:-10,0,-10 0/0:63.9315:14:14:503:0:0:0,-4.21442,-10 0/0:75.9727:19:18:659:0:0:0,-5.41854,-10 0/0:66.9418:15:15:553:0:0:0,-4.51545,-10 0/0:57.9109:12:12:456:0:0:0,-3.61236,-10 0/0:57.9109:12:12:451:0:0:0,-3.61236,-10 0/0:57.9109:12:12:456:0:0:0,-3.61236,-10 0/0:99:27:27:981:0:0:0,-8.12781,-10 0/1:99:25:15:568:10:364:-10,0,-10 0/0:60.9212:13:13:494:0:0:0,-3.91339,-10 scaffold_56 3041334 . G A 604.13 . AB=0.757576;ABP=22.0271;AC=2;AF=0.0108696;AN=184;AO=26;CIGAR=1X;DP=1811;DPB=1811;DPRA=0.773182;EPP=6.01695;EPPR=3.44946;GTI=1;LEN=1;MEANALT=1;MQM=59;MQMR=59.9395;NS=92;NUMALT=1;ODDS=3.35532;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=948;QR=64963;RO=1785;RPP=59.4686;RPPR=3879.09;RUN=1;SAF=10;SAP=6.01695;SAR=16;SRF=883;SRP=3.44946;SRR=902;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.6706:13:13:470:0:0:0,-3.91339,-10 0/0:57.6603:12:12:450:0:0:0,-3.61236,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:57.6603:12:12:453:0:0:0,-3.61236,-10 0/0:37.7925:13:12:452:1:16:0,-1.19945,-10 0/0:66.6912:15:15:542:0:0:0,-4.51545,-10 0/0:99:41:41:1508:0:0:0,-10,-10 0/0:99:33:33:1187:0:0:0,-9.93399,-10 0/0:48.6294:9:9:313:0:0:0,-2.70927,-10 0/0:36.5882:5:5:190:0:0:0,-1.50515,-10 0/0:33.5779:4:4:129:0:0:0,-1.20412,-10 0/0:45.6191:8:8:277:0:0:0,-2.40824,-10 0/0:99:31:31:1089:0:0:0,-9.33193,-10 0/0:99:38:38:1385:0:0:0,-10,-10 0/0:99:27:27:1014:0:0:0,-8.12781,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:96.792:25:25:935:0:0:0,-7.52575,-10 0/0:36.5882:5:5:154:0:0:0,-1.50515,-10 0/0:96.792:25:25:892:0:0:0,-7.52575,-10 0/0:99:36:36:1303:0:0:0,-10,-10 0/0:63.6809:14:14:504:0:0:0,-4.21442,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:36.5882:5:5:178:0:0:0,-1.50515,-10 0/0:99:28:28:997:0:0:0,-8.42884,-10 0/0:57.6603:12:12:450:0:0:0,-3.61236,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:84.7529:21:21:778:0:0:0,-6.32163,-10 0/0:66.6912:15:15:562:0:0:0,-4.51545,-10 0/0:99:26:26:943:0:0:0,-7.82678,-10 0/0:78.7324:19:19:704:0:0:0,-5.71957,-10 0/0:36.5882:5:5:190:0:0:0,-1.50515,-10 0/0:60.6706:13:13:472:0:0:0,-3.91339,-10 0/0:51.6397:10:10:336:0:0:0,-3.0103,-10 0/0:60.6706:13:13:490:0:0:0,-3.91339,-10 0/0:84.7529:21:21:771:0:0:0,-6.32163,-10 0/0:51.6397:10:10:370:0:0:0,-3.0103,-10 0/0:54.65:11:11:417:0:0:0,-3.31133,-10 0/0:99:32:32:1058:0:0:0,-9.63296,-10 0/0:63.6809:14:14:509:0:0:0,-4.21442,-10 0/0:81.7427:20:20:712:0:0:0,-6.0206,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:69.7015:16:16:584:0:0:0,-4.81648,-10 0/0:90.7731:23:23:834:0:0:0,-6.92369,-10 0/0:99:26:26:965:0:0:0,-7.82678,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:87.763:22:22:823:0:0:0,-6.62266,-10 0/0:99:39:39:1426:0:0:0,-10,-10 0/0:93.7828:24:24:868:0:0:0,-7.22472,-10 0/0:66.6912:15:15:568:0:0:0,-4.51545,-10 0/0:99:43:43:1518:0:0:0,-10,-10 0/0:69.7015:16:16:597:0:0:0,-4.81648,-10 0/0:87.763:22:22:824:0:0:0,-6.62266,-10 0/0:54.65:11:11:413:0:0:0,-3.31133,-10 0/0:30.5676:3:3:105:0:0:0,-0.90309,-9.8 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:51.6397:10:10:371:0:0:0,-3.0103,-10 0/0:96.792:25:25:909:0:0:0,-7.52575,-10 0/0:78.7324:19:19:698:0:0:0,-5.71957,-10 0/0:60.6706:13:13:481:0:0:0,-3.91339,-10 0/0:60.6706:13:13:491:0:0:0,-3.91339,-10 0/0:96.792:25:25:881:0:0:0,-7.52575,-10 0/0:75.7221:18:18:670:0:0:0,-5.41854,-10 0/0:99:36:36:1280:0:0:0,-10,-10 0/0:69.7015:16:16:580:0:0:0,-4.81648,-10 0/0:75.7221:18:18:638:0:0:0,-5.41854,-10 0/0:99:39:39:1384:0:0:0,-10,-10 0/0:99:26:26:867:0:0:0,-7.82678,-10 0/0:63.6809:14:14:509:0:0:0,-4.21442,-10 0/0:99:34:34:1266:0:0:0,-10,-10 0/0:54.65:11:11:415:0:0:0,-3.31133,-10 0/0:60.6706:13:13:494:0:0:0,-3.91339,-10 0/0:96.792:25:25:943:0:0:0,-7.52575,-10 0/0:84.7529:21:21:749:0:0:0,-6.32163,-10 0/0:57.6603:12:12:444:0:0:0,-3.61236,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:48.6294:9:9:318:0:0:0,-2.70927,-10 0/0:69.7015:16:16:592:0:0:0,-4.81648,-10 0/0:48.6294:9:9:331:0:0:0,-2.70927,-10 0/0:24.547:1:1:38:0:0:0,-0.30103,-3.8 0/1:0.148068:19:0:0:19:716:-10,-5.71957,0 0/0:99:39:39:1436:0:0:0,-10,-10 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:81.7427:20:20:714:0:0:0,-6.0206,-10 0/1:99:14:8:302:6:216:-10,0,-10 0/0:78.7324:19:19:667:0:0:0,-5.71957,-10 0/0:63.6809:14:14:510:0:0:0,-4.21442,-10 0/0:57.6603:12:12:456:0:0:0,-3.61236,-10 0/0:57.6603:12:12:455:0:0:0,-3.61236,-10 0/0:57.6603:12:12:447:0:0:0,-3.61236,-10 0/0:99:27:27:955:0:0:0,-8.12781,-10 0/0:96.792:25:25:931:0:0:0,-7.52575,-10 0/0:60.6706:13:13:478:0:0:0,-3.91339,-10 scaffold_56 3099304 . A G 1095.24 . AB=0.652174;ABP=16.8888;AC=4;AF=0.0217391;AN=184;AO=45;CIGAR=1X;DP=1366;DPB=1366;DPRA=1.17039;EPP=3.44459;EPPR=3.02509;GTI=2;LEN=1;MEANALT=1;MQM=59.2444;MQMR=59.9765;NS=92;NUMALT=1;ODDS=2.55022;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1604;QR=48515;RO=1321;RPP=100.727;RPPR=2871.53;RUN=1;SAF=24;SAP=3.44459;SAR=21;SRF=659;SRP=3.02509;SRR=662;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.997:14:14:510:0:0:0,-4.21442,-10 0/0:32.9352:8:8:264:0:0:0,-2.40824,-10 0/0:57.0176:16:16:602:0:0:0,-4.81648,-10 0/0:29.9249:7:7:243:0:0:0,-2.10721,-10 0/0:29.9249:7:7:266:0:0:0,-2.10721,-10 0/0:23.9043:5:5:189:0:0:0,-1.50515,-10 0/0:99:32:32:1186:0:0:0,-9.63296,-10 0/0:50.997:14:14:519:0:0:0,-4.21442,-10 0/0:38.9558:10:10:375:0:0:0,-3.0103,-10 0/0:11.8631:1:1:38:0:0:0,-0.30103,-3.8 0/0:17.8837:3:3:101:0:0:0,-0.90309,-9.42667 0/0:26.9146:6:6:228:0:0:0,-1.80618,-10 0/0:57.0176:16:16:594:0:0:0,-4.81648,-10 0/0:78.0897:23:23:844:0:0:0,-6.92369,-10 0/0:93.1406:28:28:1025:0:0:0,-8.42884,-10 0/0:75.0794:22:22:804:0:0:0,-6.62266,-10 0/0:69.0588:20:20:750:0:0:0,-6.0206,-10 0/0:29.9249:7:7:243:0:0:0,-2.10721,-10 0/0:66.0485:19:19:693:0:0:0,-5.71957,-10 0/1:99:34:13:483:21:761:-10,0,-10 0/0:41.9661:11:11:407:0:0:0,-3.31133,-10 0/0:81.0999:24:24:852:0:0:0,-7.22472,-10 0/0:38.9558:10:10:379:0:0:0,-3.0103,-10 0/0:81.0999:24:24:904:0:0:0,-7.22472,-10 0/0:60.0279:17:17:642:0:0:0,-5.11751,-10 0/0:69.0588:20:20:751:0:0:0,-6.0206,-10 0/0:72.0691:21:21:784:0:0:0,-6.32163,-10 0/0:47.9867:13:13:493:0:0:0,-3.91339,-10 0/0:60.0279:17:17:625:0:0:0,-5.11751,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:23.9043:5:5:177:0:0:0,-1.50515,-10 0/0:17.8837:3:3:114:0:0:0,-0.90309,-10 0/0:47.9867:13:13:493:0:0:0,-3.91339,-10 0/0:29.9249:7:7:258:0:0:0,-2.10721,-10 0/0:54.0073:15:15:570:0:0:0,-4.51545,-10 0/1:0.00628442:7:0:0:7:259:-10,-2.10721,0 0/0:35.9455:9:9:328:0:0:0,-2.70927,-10 0/0:84.1102:25:25:920:0:0:0,-7.52575,-10 0/1:0.0251924:9:0:0:9:307:-10,-2.70927,0 0/0:44.9764:12:12:452:0:0:0,-3.61236,-10 0/0:75.0794:22:22:827:0:0:0,-6.62266,-10 0/0:41.9661:11:11:401:0:0:0,-3.31133,-10 0/0:35.9455:9:9:339:0:0:0,-2.70927,-10 0/1:99:19:11:407:8:277:-10,0,-10 0/0:72.0691:21:21:776:0:0:0,-6.32163,-10 0/0:35.9455:9:9:342:0:0:0,-2.70927,-10 0/0:99:38:38:1370:0:0:0,-10,-10 0/0:54.0073:15:15:561:0:0:0,-4.51545,-10 0/0:41.9661:11:11:402:0:0:0,-3.31133,-10 0/0:66.0485:19:19:684:0:0:0,-5.71957,-10 0/0:44.9764:12:12:433:0:0:0,-3.61236,-10 0/0:81.0999:24:24:861:0:0:0,-7.22472,-10 0/0:29.9249:7:7:261:0:0:0,-2.10721,-10 0/0:20.894:4:4:152:0:0:0,-1.20412,-10 0/0:81.0999:24:24:849:0:0:0,-7.22472,-10 0/0:60.0279:17:17:620:0:0:0,-5.11751,-10 0/0:90.1311:27:27:984:0:0:0,-8.12781,-10 0/0:20.894:4:4:124:0:0:0,-1.20412,-10 0/0:57.0176:16:16:608:0:0:0,-4.81648,-10 0/0:26.9146:6:6:228:0:0:0,-1.80618,-10 0/0:63.0382:18:18:635:0:0:0,-5.41854,-10 0/0:41.9661:11:11:413:0:0:0,-3.31133,-10 0/0:99:33:33:1235:0:0:0,-9.93399,-10 0/0:38.9558:10:10:375:0:0:0,-3.0103,-10 0/0:32.9352:8:8:299:0:0:0,-2.40824,-10 0/0:84.1102:25:25:900:0:0:0,-7.52575,-10 0/0:57.0176:16:16:588:0:0:0,-4.81648,-10 0/0:32.9352:8:8:292:0:0:0,-2.40824,-10 0/0:96.1503:29:29:1037:0:0:0,-8.72987,-10 0/0:57.0176:16:16:597:0:0:0,-4.81648,-10 0/0:54.0073:15:15:550:0:0:0,-4.51545,-10 0/0:90.1311:27:27:973:0:0:0,-8.12781,-10 0/0:47.9867:13:13:465:0:0:0,-3.91339,-10 0/0:41.9661:11:11:407:0:0:0,-3.31133,-10 0/0:57.0176:16:16:595:0:0:0,-4.81648,-10 0/0:47.9867:13:13:464:0:0:0,-3.91339,-10 0/0:35.9455:9:9:332:0:0:0,-2.70927,-10 0/0:57.0176:16:16:603:0:0:0,-4.81648,-10 0/0:29.9249:7:7:257:0:0:0,-2.10721,-10 0/0:17.8837:3:3:101:0:0:0,-0.90309,-9.42667 0/0:87.1204:26:26:950:0:0:0,-7.82678,-10 0/0:47.9867:13:13:482:0:0:0,-3.91339,-10 0/0:44.9764:12:12:451:0:0:0,-3.61236,-10 0/0:63.0382:18:18:617:0:0:0,-5.41854,-10 0/0:38.9558:10:10:370:0:0:0,-3.0103,-10 0/0:26.9146:6:6:223:0:0:0,-1.80618,-10 0/0:54.0073:15:15:534:0:0:0,-4.51545,-10 0/0:35.9455:9:9:329:0:0:0,-2.70927,-10 0/0:23.9043:5:5:189:0:0:0,-1.50515,-10 0/0:66.0485:19:19:680:0:0:0,-5.71957,-10 0/0:63.0382:18:18:667:0:0:0,-5.41854,-10 0/0:38.9558:10:10:379:0:0:0,-3.0103,-10 scaffold_56 3116975 . G A 1302.4 . AB=0.617284;ABP=12.6881;AC=4;AF=0.0217391;AN=184;AO=53;CIGAR=1X;DP=1898;DPB=1898;DPRA=1.09502;EPP=5.01789;EPPR=7.98831;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9452;NS=92;NUMALT=1;ODDS=5.03574;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1887;QR=67608;RO=1843;RPP=109.576;RPPR=3875.81;RUN=1;SAF=31;SAP=6.32897;SAR=22;SRF=904;SRP=4.45363;SRR=939;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:76.1085:20:20:718:0:0:0,-6.0206,-10 0/0:76.1085:20:20:700:0:0:0,-6.0206,-10 0/0:99:29:29:1047:0:0:0,-8.72987,-10 0/0:58.0467:14:14:497:0:0:0,-4.21442,-10 0/0:55.0364:13:13:472:0:0:0,-3.91339,-10 0/0:49.0158:11:11:378:0:0:0,-3.31133,-10 0/0:99:29:29:1054:0:0:0,-8.72987,-10 0/0:82.129:22:22:816:0:0:0,-6.62266,-10 0/0:70.0879:18:18:660:0:0:0,-5.41854,-10 0/0:21.9231:2:2:76:0:0:0,-0.60206,-7.22 0/0:55.0364:13:13:487:0:0:0,-3.91339,-10 0/0:46.0055:10:10:380:0:0:0,-3.0103,-10 0/0:99:33:33:1188:0:0:0,-9.93399,-10 0/0:88.1493:25:24:868:0:0:0,-7.22472,-10 0/0:85.1392:23:23:852:0:0:0,-6.92369,-10 0/0:66.4208:26:25:917:1:15:0,-4.91181,-10 0/0:73.0982:19:19:668:0:0:0,-5.71957,-10 0/0:39.9849:8:8:304:0:0:0,-2.40824,-10 0/0:67.0776:17:17:635:0:0:0,-5.11751,-10 0/0:99:46:46:1568:0:0:0,-10,-10 0/0:79.1187:21:21:791:0:0:0,-6.32163,-10 0/0:99:41:41:1531:0:0:0,-10,-10 0/0:33.9643:6:6:225:0:0:0,-1.80618,-10 0/0:67.0776:17:17:636:0:0:0,-5.11751,-10 0/0:73.0982:19:19:719:0:0:0,-5.71957,-10 0/0:76.1085:20:20:723:0:0:0,-6.0206,-10 0/0:85.1392:23:23:844:0:0:0,-6.92369,-10 0/0:54.1052:22:21:770:1:16:0,-3.68024,-10 0/0:82.129:22:22:801:0:0:0,-6.62266,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/1:0.00247819:8:0:0:8:287:-10,-2.40824,0 0/0:52.0261:12:12:448:0:0:0,-3.61236,-10 0/0:85.1392:23:23:847:0:0:0,-6.92369,-10 0/0:58.0467:14:14:500:0:0:0,-4.21442,-10 0/0:79.1187:21:21:794:0:0:0,-6.32163,-10 0/0:42.9952:9:9:339:0:0:0,-2.70927,-10 0/0:70.0879:18:18:673:0:0:0,-5.41854,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:61.057:15:15:568:0:0:0,-4.51545,-10 0/0:39.9849:8:8:302:0:0:0,-2.40824,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:97.1773:27:27:967:0:0:0,-8.12781,-10 0/0:73.0982:19:19:708:0:0:0,-5.71957,-10 0/0:99:28:28:1040:0:0:0,-8.42884,-10 0/1:99:19:5:190:14:515:-10,0,-10 0/0:79.1187:21:21:761:0:0:0,-6.32163,-10 0/0:99:41:41:1507:0:0:0,-10,-10 0/0:55.0364:13:13:483:0:0:0,-3.91339,-10 0/0:85.1392:23:23:870:0:0:0,-6.92369,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:42.9952:9:9:315:0:0:0,-2.70927,-10 0/1:99:40:17:622:23:826:-10,0,-10 0/0:64.0673:16:16:601:0:0:0,-4.81648,-10 0/0:24.9334:3:3:91:0:0:0,-0.90309,-8.49333 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:61.057:15:15:561:0:0:0,-4.51545,-10 0/0:70.0879:18:18:651:0:0:0,-5.41854,-10 0/0:42.9952:9:9:319:0:0:0,-2.70927,-10 0/0:94.1686:26:26:952:0:0:0,-7.82678,-10 0/0:61.057:15:15:512:0:0:0,-4.51545,-10 0/0:99:42:41:1448:0:0:0,-10,-10 0/0:73.0982:19:19:717:0:0:0,-5.71957,-10 0/0:99:39:39:1391:0:0:0,-10,-10 0/0:79.1187:21:21:776:0:0:0,-6.32163,-10 0/0:46.0055:10:10:375:0:0:0,-3.0103,-10 0/0:99:39:39:1470:0:0:0,-10,-10 0/0:76.1085:20:20:726:0:0:0,-6.0206,-10 0/0:30.954:5:5:167:0:0:0,-1.50515,-10 0/0:99:46:46:1736:0:0:0,-10,-10 0/0:61.057:15:15:549:0:0:0,-4.51545,-10 0/0:58.0467:14:14:509:0:0:0,-4.21442,-10 0/0:99:29:29:1081:0:0:0,-8.72987,-10 0/0:85.1392:23:23:840:0:0:0,-6.92369,-10 0/0:76.1085:20:20:753:0:0:0,-6.0206,-10 0/0:94.1686:26:26:955:0:0:0,-7.82678,-10 0/0:73.0982:19:19:712:0:0:0,-5.71957,-10 0/0:52.0261:12:12:447:0:0:0,-3.61236,-10 0/0:76.1085:20:20:741:0:0:0,-6.0206,-10 0/0:36.9746:7:7:256:0:0:0,-2.10721,-10 0/0:39.9849:8:8:303:0:0:0,-2.40824,-10 0/0:85.1392:23:23:830:0:0:0,-6.92369,-10 0/0:76.1085:20:20:758:0:0:0,-6.0206,-10 0/0:70.0879:18:18:657:0:0:0,-5.41854,-10 0/0:91.1592:25:25:882:0:0:0,-7.52575,-10 0/0:70.0879:18:18:644:0:0:0,-5.41854,-10 0/0:58.0467:14:14:514:0:0:0,-4.21442,-10 0/0:88.1493:24:24:902:0:0:0,-7.22472,-10 0/0:88.1493:24:24:883:0:0:0,-7.22472,-10 0/1:99:14:9:341:5:190:-10,0,-10 0/0:52.158:28:27:1013:1:38:0,-3.18168,-10 0/0:73.0982:19:19:707:0:0:0,-5.71957,-10 0/0:82.129:22:22:830:0:0:0,-6.62266,-10 scaffold_56 3116999 . G A 7082.62 . AB=0.532967;ABP=4.72839;AC=23;AF=0.125;AN=184;AO=259;CIGAR=1X;DP=1900;DPB=1900;DPRA=1.15051;EPP=8.25034;EPPR=3.11761;GTI=1;LEN=1;MEANALT=1.05882;MQM=60;MQMR=59.9384;NS=92;NUMALT=1;ODDS=0.823837;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9453;QR=60102;RO=1639;RPP=556.769;RPPR=3484.31;RUN=1;SAF=116;SAP=9.12228;SAR=143;SRF=815;SRP=3.11761;SRR=824;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.2965:20:20:736:0:0:0,-6.0206,-10 0/0:61.2965:20:20:738:0:0:0,-6.0206,-10 0/0:61.7435:29:28:989:1:16:0,-5.66747,-10 1/1:14.1287:14:0:0:14:490:-10,-4.21442,0 0/0:40.2244:13:13:471:0:0:0,-3.91339,-10 0/0:34.2038:11:11:402:0:0:0,-3.31133,-10 0/0:88.3891:29:29:1047:0:0:0,-8.72987,-10 0/0:67.3171:22:22:812:0:0:0,-6.62266,-10 0/0:55.2759:18:18:664:0:0:0,-5.41854,-10 0/0:7.11108:2:2:76:0:0:0,-0.60206,-7.22 0/0:40.2244:13:13:492:0:0:0,-3.91339,-10 0/1:0.482201:10:0:0:10:371:-10,-3.0103,0 0/0:99:33:33:1169:0:0:0,-9.93399,-10 0/0:73.3377:25:24:865:0:0:0,-7.22472,-10 0/1:99:23:9:320:14:499:-10,0,-10 0/0:79.3583:26:26:957:0:0:0,-7.82678,-10 0/1:99:19:7:261:12:441:-10,0,-10 0/0:25.1729:8:8:301:0:0:0,-2.40824,-10 0/0:52.2656:17:17:606:0:0:0,-5.11751,-10 0/0:99:46:46:1645:0:0:0,-10,-10 0/0:64.3068:21:21:776:0:0:0,-6.32163,-10 0/0:99:41:41:1495:0:0:0,-10,-10 0/0:19.1523:6:6:206:0:0:0,-1.80618,-10 0/0:52.2656:17:17:625:0:0:0,-5.11751,-10 0/0:61.2965:20:20:756:0:0:0,-6.0206,-10 0/0:64.3068:21:21:766:0:0:0,-6.32163,-10 0/0:70.3274:23:23:846:0:0:0,-6.92369,-10 0/0:42.8712:22:21:769:1:15:0,-3.78024,-10 0/0:67.3171:22:22:812:0:0:0,-6.62266,-10 0/0:94.4069:31:31:1171:0:0:0,-9.33193,-10 0/0:25.1729:8:8:280:0:0:0,-2.40824,-10 0/0:37.2141:12:12:453:0:0:0,-3.61236,-10 0/0:70.3274:23:23:820:0:0:0,-6.92369,-10 0/0:43.2347:14:14:491:0:0:0,-4.21442,-10 0/0:64.3068:21:21:790:0:0:0,-6.32163,-10 0/0:28.1832:9:9:342:0:0:0,-2.70927,-10 0/0:55.2759:18:18:656:0:0:0,-5.41854,-10 0/0:91.3994:30:30:1124:0:0:0,-9.0309,-10 0/0:46.245:15:15:557:0:0:0,-4.51545,-10 0/0:25.1729:8:8:301:0:0:0,-2.40824,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:82.3686:27:27:1001:0:0:0,-8.12781,-10 0/0:55.2759:18:18:673:0:0:0,-5.41854,-10 0/0:85.3789:28:28:1021:0:0:0,-8.42884,-10 0/0:55.2759:18:18:667:0:0:0,-5.41854,-10 0/0:64.3068:21:21:775:0:0:0,-6.32163,-10 0/0:99:42:42:1559:0:0:0,-10,-10 0/0:40.2244:13:13:494:0:0:0,-3.91339,-10 0/0:70.3274:23:23:872:0:0:0,-6.92369,-10 0/0:97.4197:32:32:1168:0:0:0,-9.63296,-10 0/0:28.1832:9:9:342:0:0:0,-2.70927,-10 0/0:99:41:41:1463:0:0:0,-10,-10 0/0:49.2553:16:16:592:0:0:0,-4.81648,-10 0/0:10.1214:3:3:114:0:0:0,-0.90309,-10 0/0:91.3994:30:30:1118:0:0:0,-9.0309,-10 0/0:46.245:15:15:558:0:0:0,-4.51545,-10 0/0:55.2759:18:18:641:0:0:0,-5.41854,-10 0/0:28.1832:9:9:311:0:0:0,-2.70927,-10 0/0:79.3583:26:26:951:0:0:0,-7.82678,-10 0/0:46.245:15:15:541:0:0:0,-4.51545,-10 0/0:99:42:42:1511:0:0:0,-10,-10 1/1:29.1802:19:0:0:19:696:-10,-5.71957,0 0/0:99:39:39:1417:0:0:0,-10,-10 0/0:64.3068:21:21:789:0:0:0,-6.32163,-10 0/0:31.1935:10:10:365:0:0:0,-3.0103,-10 0/1:99:38:15:564:23:848:-10,0,-10 0/0:61.2965:20:20:727:0:0:0,-6.0206,-10 0/0:16.142:5:5:155:0:0:0,-1.50515,-10 0/1:99:46:25:934:21:792:-10,0,-10 1/1:17.139:15:0:0:15:570:-10,-4.51545,0 1/1:14.1287:14:0:0:14:510:-10,-4.21442,0 1/1:59.2832:29:0:0:29:1083:-10,-8.72987,0 1/1:41.2214:23:0:0:23:834:-10,-6.92369,0 1/1:32.1905:20:0:0:20:749:-10,-6.0206,0 1/1:50.2523:26:0:0:26:901:-10,-7.82678,0 0/0:58.2862:19:19:687:0:0:0,-5.71957,-10 0/0:37.2141:12:12:452:0:0:0,-3.61236,-10 0/0:64.3068:21:21:789:0:0:0,-6.32163,-10 0/0:22.1626:7:7:257:0:0:0,-2.10721,-10 0/0:25.1729:8:8:302:0:0:0,-2.40824,-10 0/0:70.3274:23:23:869:0:0:0,-6.92369,-10 0/0:61.2965:20:20:759:0:0:0,-6.0206,-10 0/0:55.2759:18:18:625:0:0:0,-5.41854,-10 0/0:76.348:25:25:919:0:0:0,-7.52575,-10 0/1:99:18:13:448:5:190:-10,0,-10 0/0:43.2347:14:14:508:0:0:0,-4.21442,-10 0/0:73.3377:24:24:876:0:0:0,-7.22472,-10 0/0:73.3377:24:24:897:0:0:0,-7.22472,-10 0/0:43.2347:14:14:505:0:0:0,-4.21442,-10 0/1:99:28:15:568:12:448:-10,0,-10 0/0:58.2862:19:19:713:0:0:0,-5.71957,-10 0/0:67.3171:22:22:829:0:0:0,-6.62266,-10 scaffold_56 3134987 . C T 1360.23 . AB=0.438462;ABP=7.28643;AC=10;AF=0.0543478;AN=184;AO=59;CIGAR=1X;DP=1288;DPB=1288;DPRA=0.925435;EPP=3.34154;EPPR=5.98039;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9919;NS=92;NUMALT=1;ODDS=0.105369;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2141;QR=45333;RO=1229;RPP=131.127;RPPR=2671.75;RUN=1;SAF=28;SAP=3.34154;SAR=31;SRF=594;SRP=5.98039;SRR=635;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.0312:13:13:493:0:0:0,-3.91339,-10 0/0:43.9591:6:6:201:0:0:0,-1.80618,-10 0/1:40.5962:8:6:228:2:76:-6.25892,0,-10 0/0:49.9797:8:8:304:0:0:0,-2.40824,-10 0/0:80.0826:18:18:661:0:0:0,-5.41854,-10 0/0:59.0106:11:11:392:0:0:0,-3.31133,-10 0/0:83.0929:19:19:720:0:0:0,-5.71957,-10 0/0:77.0724:17:17:630:0:0:0,-5.11751,-10 0/0:65.0312:13:13:479:0:0:0,-3.91339,-10 0/0:28.9076:1:1:38:0:0:0,-0.30103,-3.8 0/0:40.9488:5:5:184:0:0:0,-1.50515,-10 0/1:7.67012e-05:5:0:0:5:177:-10,-1.50515,0 0/0:83.0929:19:19:694:0:0:0,-5.71957,-10 0/0:77.0724:17:17:641:0:0:0,-5.11751,-10 0/1:99:21:14:529:7:265:-10,0,-10 0/1:79.9293:13:9:325:4:129:-10,0,-10 0/0:68.0415:14:14:523:0:0:0,-4.21442,-10 0/0:43.9591:6:6:228:0:0:0,-1.80618,-10 0/0:68.0415:14:14:506:0:0:0,-4.21442,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:52.99:9:9:338:0:0:0,-2.70927,-10 0/0:89.1137:21:21:798:0:0:0,-6.32163,-10 0/0:43.9591:6:6:206:0:0:0,-1.80618,-10 0/0:49.9797:8:8:304:0:0:0,-2.40824,-10 0/0:83.0929:19:19:707:0:0:0,-5.71957,-10 0/0:74.0621:16:16:550:0:0:0,-4.81648,-10 0/0:62.0209:12:12:443:0:0:0,-3.61236,-10 0/0:56.0003:10:10:346:0:0:0,-3.0103,-10 0/0:65.0312:13:13:414:0:0:0,-3.91339,-10 0/1:99:12:6:228:6:218:-10,0,-10 0/0:43.9591:6:6:225:0:0:0,-1.80618,-10 0/0:49.9797:8:8:281:0:0:0,-2.40824,-10 0/0:83.0929:19:19:700:0:0:0,-5.71957,-10 0/0:56.0003:10:10:379:0:0:0,-3.0103,-10 0/0:68.0415:14:14:491:0:0:0,-4.21442,-10 0/0:43.9591:6:6:226:0:0:0,-1.80618,-10 0/0:59.0106:11:11:376:0:0:0,-3.31133,-10 0/0:80.0826:18:18:680:0:0:0,-5.41854,-10 0/0:65.0312:13:13:492:0:0:0,-3.91339,-10 0/0:52.99:9:9:339:0:0:0,-2.70927,-10 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:71.0518:15:15:569:0:0:0,-4.51545,-10 0/0:62.0209:12:12:456:0:0:0,-3.61236,-10 0/0:80.0826:18:18:649:0:0:0,-5.41854,-10 0/0:80.0826:18:18:660:0:0:0,-5.41854,-10 0/0:74.0621:16:16:598:0:0:0,-4.81648,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:80.0826:18:18:666:0:0:0,-5.41854,-10 0/0:62.0209:12:12:431:0:0:0,-3.61236,-10 0/0:95.1346:23:23:846:0:0:0,-6.92369,-10 0/0:62.0209:12:12:449:0:0:0,-3.61236,-10 0/0:66.9951:23:22:829:1:16:0,-3.96196,-10 0/0:86.1031:20:20:722:0:0:0,-6.0206,-10 0/0:34.9282:3:3:114:0:0:0,-0.90309,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:52.99:9:9:338:0:0:0,-2.70927,-10 0/0:98.1422:24:24:894:0:0:0,-7.22472,-10 0/0:40.9488:5:5:181:0:0:0,-1.50515,-10 0/0:59.0106:11:11:418:0:0:0,-3.31133,-10 0/0:49.9797:8:8:296:0:0:0,-2.40824,-10 0/0:86.1031:20:20:753:0:0:0,-6.0206,-10 0/0:77.0724:17:17:623:0:0:0,-5.11751,-10 0/0:99:32:32:1163:0:0:0,-9.63296,-10 0/0:68.0415:14:14:529:0:0:0,-4.21442,-10 0/0:37.9385:4:4:152:0:0:0,-1.20412,-10 0/1:99:19:10:342:9:331:-10,0,-10 0/1:25.2644:15:13:448:2:76:-4.72574,0,-10 0/0:52.99:9:9:337:0:0:0,-2.70927,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:40.9488:5:5:161:0:0:0,-1.50515,-10 0/0:52.99:9:9:340:0:0:0,-2.70927,-10 0/0:89.1137:21:21:754:0:0:0,-6.32163,-10 0/0:86.1031:20:20:733:0:0:0,-6.0206,-10 0/0:65.0312:13:13:480:0:0:0,-3.91339,-10 0/0:89.1137:21:21:775:0:0:0,-6.32163,-10 0/0:43.9591:6:6:228:0:0:0,-1.80618,-10 0/0:77.0724:17:17:641:0:0:0,-5.11751,-10 0/0:56.0003:10:10:356:0:0:0,-3.0103,-10 0/0:43.9591:6:6:227:0:0:0,-1.80618,-10 0/0:56.0003:10:10:375:0:0:0,-3.0103,-10 0/0:99:26:26:986:0:0:0,-7.82678,-10 0/0:83.0929:19:19:710:0:0:0,-5.71957,-10 0/1:94.2917:12:8:294:4:143:-10,0,-10 0/0:68.0415:14:14:527:0:0:0,-4.21442,-10 0/0:80.0826:18:18:669:0:0:0,-5.41854,-10 0/0:34.9282:3:3:114:0:0:0,-0.90309,-10 0/0:65.0312:13:13:494:0:0:0,-3.91339,-10 0/1:0.00982878:12:0:0:12:451:-10,-3.61236,0 0/0:2.7562:4:3:110:1:31:-2.49794,0,-9.66461 0/0:77.0724:17:17:618:0:0:0,-5.11751,-10 0/1:99:13:7:258:6:228:-10,0,-10 0/0:56.0003:10:10:379:0:0:0,-3.0103,-10 scaffold_56 3135018 . C A 44.8101 . AB=0.285714;ABP=8.59409;AC=1;AF=0.00543478;AN=184;AO=5;CIGAR=1X;DP=1297;DPB=1297;DPRA=1.65468;EPP=6.91895;EPPR=5.441;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9915;NS=92;NUMALT=1;ODDS=10.3178;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=47300;RO=1290;RPP=13.8677;RPPR=2718.02;RUN=1;SAF=1;SAP=6.91895;SAR=4;SRF=620;SRP=7.21858;SRR=670;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:83.4497:13:13:471:0:0:0,-3.91339,-10 0/0:62.3777:6:6:194:0:0:0,-1.80618,-10 0/0:68.3983:8:8:301:0:0:0,-2.40824,-10 0/0:68.3983:8:8:301:0:0:0,-2.40824,-10 0/0:98.4995:18:18:674:0:0:0,-5.41854,-10 0/0:77.4292:11:11:394:0:0:0,-3.31133,-10 0/0:99:20:20:733:0:0:0,-6.0206,-10 0/0:95.4901:17:17:626:0:0:0,-5.11751,-10 0/0:83.4497:13:13:457:0:0:0,-3.91339,-10 0/0:47.3262:1:1:38:0:0:0,-0.30103,-3.8 0/0:59.3674:5:5:190:0:0:0,-1.50515,-10 0/0:59.3674:5:5:189:0:0:0,-1.50515,-10 0/0:99:19:19:716:0:0:0,-5.71957,-10 0/0:95.4901:17:17:609:0:0:0,-5.11751,-10 0/0:99:21:21:775:0:0:0,-6.32163,-10 0/1:44.8101:14:10:346:4:145:-10,0,-10 0/0:86.46:14:14:508:0:0:0,-4.21442,-10 0/0:62.3777:6:6:228:0:0:0,-1.80618,-10 0/0:86.46:14:14:498:0:0:0,-4.21442,-10 0/0:99:27:27:1017:0:0:0,-8.12781,-10 0/0:71.4086:9:9:342:0:0:0,-2.70927,-10 0/0:99:20:20:757:0:0:0,-6.0206,-10 0/0:62.3777:6:6:228:0:0:0,-1.80618,-10 0/0:71.4086:9:9:340:0:0:0,-2.70927,-10 0/0:99:19:19:696:0:0:0,-5.71957,-10 0/0:92.4802:16:16:560:0:0:0,-4.81648,-10 0/0:80.4395:12:12:444:0:0:0,-3.61236,-10 0/0:77.4292:11:11:377:0:0:0,-3.31133,-10 0/0:83.4497:13:13:460:0:0:0,-3.91339,-10 0/0:80.4395:12:12:450:0:0:0,-3.61236,-10 0/0:62.3777:6:6:228:0:0:0,-1.80618,-10 0/0:68.3983:8:8:299:0:0:0,-2.40824,-10 0/0:99:19:19:663:0:0:0,-5.71957,-10 0/0:74.4189:10:10:366:0:0:0,-3.0103,-10 0/0:86.46:14:14:515:0:0:0,-4.21442,-10 0/0:62.3777:6:6:209:0:0:0,-1.80618,-10 0/0:77.4292:11:11:414:0:0:0,-3.31133,-10 0/0:98.4995:18:18:671:0:0:0,-5.41854,-10 0/0:83.4497:13:13:490:0:0:0,-3.91339,-10 0/0:71.4086:9:9:342:0:0:0,-2.70927,-10 0/0:99:30:29:1071:0:0:0,-8.72987,-10 0/0:89.4702:15:15:569:0:0:0,-4.51545,-10 0/0:80.4395:12:12:444:0:0:0,-3.61236,-10 0/0:98.4995:18:18:671:0:0:0,-5.41854,-10 0/0:99:19:19:716:0:0:0,-5.71957,-10 0/0:92.4802:16:16:571:0:0:0,-4.81648,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:98.4995:18:18:671:0:0:0,-5.41854,-10 0/0:80.4395:12:12:416:0:0:0,-3.61236,-10 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:80.4395:12:12:441:0:0:0,-3.61236,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:99:20:20:722:0:0:0,-6.0206,-10 0/0:53.3468:3:3:114:0:0:0,-0.90309,-10 0/0:99:26:26:938:0:0:0,-7.82678,-10 0/0:74.4189:10:10:377:0:0:0,-3.0103,-10 0/0:99:24:24:878:0:0:0,-7.22472,-10 0/0:59.3674:5:5:165:0:0:0,-1.50515,-10 0/0:77.4292:11:11:418:0:0:0,-3.31133,-10 0/0:68.3983:8:8:281:0:0:0,-2.40824,-10 0/0:99:20:20:743:0:0:0,-6.0206,-10 0/0:95.4901:17:17:607:0:0:0,-5.11751,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:86.46:14:14:527:0:0:0,-4.21442,-10 0/0:56.3571:4:4:142:0:0:0,-1.20412,-10 0/0:99:19:19:665:0:0:0,-5.71957,-10 0/0:89.4702:16:15:540:0:0:0,-4.51545,-10 0/0:71.4086:9:9:329:0:0:0,-2.70927,-10 0/0:99:32:31:1100:1:16:0,-6.52781,-10 0/0:59.3674:5:5:178:0:0:0,-1.50515,-10 0/0:71.4086:9:9:332:0:0:0,-2.70927,-10 0/0:99:21:21:760:0:0:0,-6.32163,-10 0/0:99:20:20:675:0:0:0,-6.0206,-10 0/0:83.4497:13:13:494:0:0:0,-3.91339,-10 0/0:99:21:21:772:0:0:0,-6.32163,-10 0/0:62.3777:6:6:228:0:0:0,-1.80618,-10 0/0:95.4901:17:17:632:0:0:0,-5.11751,-10 0/0:74.4189:10:10:372:0:0:0,-3.0103,-10 0/0:62.3777:6:6:227:0:0:0,-1.80618,-10 0/0:74.4189:10:10:373:0:0:0,-3.0103,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:99:19:19:703:0:0:0,-5.71957,-10 0/0:80.4395:12:12:448:0:0:0,-3.61236,-10 0/0:86.46:14:14:525:0:0:0,-4.21442,-10 0/0:99:19:19:698:0:0:0,-5.71957,-10 0/0:53.3468:3:3:114:0:0:0,-0.90309,-10 0/0:83.4497:13:13:489:0:0:0,-3.91339,-10 0/0:80.4395:12:12:455:0:0:0,-3.61236,-10 0/0:56.3571:4:4:147:0:0:0,-1.20412,-10 0/0:95.4901:17:17:640:0:0:0,-5.11751,-10 0/0:83.4497:13:13:474:0:0:0,-3.91339,-10 0/0:74.4189:10:10:378:0:0:0,-3.0103,-10 scaffold_56 3136988 . G C 16217.7 . AB=0.536232;ABP=9.30442;AC=68;AF=0.369565;AN=184;AO=572;CIGAR=1X;DP=1492;DPB=1492;DPRA=1.22172;EPP=3.55696;EPPR=3.24736;GTI=3;LEN=1;MEANALT=1.06522;MQM=59.9598;MQMR=59.9945;NS=92;NUMALT=1;ODDS=0.146258;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=20986;QR=33964;RO=916;RPP=1210.59;RPPR=1897.68;RUN=1;SAF=296;SAP=4.52881;SAR=276;SRF=474;SRP=5.4378;SRR=442;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:20.9686:7:0:0:7:265:-10,-2.10721,0 0/0:49.1468:15:15:565:0:0:0,-4.51545,-10 0/0:37.1056:11:11:409:0:0:0,-3.31133,-10 0/0:22.0541:6:6:215:0:0:0,-1.80618,-10 0/0:43.1262:13:13:465:0:0:0,-3.91339,-10 1/1:33.0098:11:0:0:11:410:-10,-3.31133,0 0/1:99:30:8:304:22:788:-10,0,-10 0/0:82.2601:26:26:988:0:0:0,-7.82678,-10 0/0:43.1262:13:13:470:0:0:0,-3.91339,-10 0/0:10.0129:2:2:75:0:0:0,-0.60206,-7.125 1/1:29.9995:10:0:0:10:378:-10,-3.0103,0 0/0:28.0747:8:8:303:0:0:0,-2.40824,-10 0/1:99:33:17:629:15:558:-10,0,-10 0/1:99:20:11:407:9:342:-10,0,-10 0/0:64.1983:20:20:735:0:0:0,-6.0206,-10 0/0:49.1468:15:15:538:0:0:0,-4.51545,-10 0/0:49.1468:15:15:561:0:0:0,-4.51545,-10 0/0:16.0335:4:4:148:0:0:0,-1.20412,-10 0/1:99:17:8:304:9:340:-10,0,-10 1/1:90.2053:30:0:0:30:1106:-10,-9.0309,0 1/1:36.0201:12:0:0:12:454:-10,-3.61236,0 0/1:99:31:11:407:20:755:-10,0,-10 0/0:46.1365:14:14:527:0:0:0,-4.21442,-10 1/1:57.0922:19:0:0:19:720:-10,-5.71957,0 0/0:37.1056:11:11:396:0:0:0,-3.31133,-10 0/1:0.793932:18:1:38:17:624:-10,-0.363267,0 1/1:51.0716:17:0:0:17:608:-10,-5.11751,0 0/0:25.0644:7:7:263:0:0:0,-2.10721,-10 0/0:40.1159:12:12:418:0:0:0,-3.61236,-10 0/1:99:19:13:488:6:226:-10,0,-10 0/0:28.0747:8:8:304:0:0:0,-2.40824,-10 1/1:29.9995:10:0:0:10:367:-10,-3.0103,0 1/1:36.0201:12:0:0:12:455:-10,-3.61236,0 0/0:52.1571:16:16:598:0:0:0,-4.81648,-10 1/1:33.0098:11:0:0:11:416:-10,-3.31133,0 0/1:0.6661:2:0:0:2:76:-7.22,-0.60206,0 1/1:45.051:15:0:0:15:514:-10,-4.51545,0 0/1:99:24:8:304:16:606:-10,0,-10 0/1:18.7207:14:1:38:13:465:-10,0,-0.731708 0/0:43.1262:13:13:490:0:0:0,-3.91339,-10 0/1:99:21:11:418:10:380:-10,0,-10 0/1:16.4084:15:1:38:14:524:-10,0,-0.460641 1/1:14.948:5:0:0:5:190:-10,-1.50515,0 0/1:99:35:14:514:21:772:-10,0,-10 1/1:72.1436:24:0:0:24:877:-10,-7.22472,0 0/1:99:10:6:227:4:152:-10,0,-10 0/1:99:28:14:532:13:463:-10,0,-10 0/1:99:30:16:606:14:474:-10,0,-10 1/1:39.0304:13:0:0:13:487:-10,-3.91339,0 0/0:91.2895:29:29:1066:0:0:0,-8.72987,-10 0/0:40.1159:12:12:446:0:0:0,-3.61236,-10 0/1:99:32:12:445:20:733:-10,0,-10 1/1:48.0613:16:0:0:16:583:-10,-4.81648,0 0/1:0.950244:1:1:38:0:0:0,-0.30103,-3.8 0/1:99:42:24:901:17:570:-10,0,-10 0/0:25.0644:7:7:266:0:0:0,-2.10721,-10 1/1:26.9892:9:0:0:9:326:-10,-2.70927,0 1/1:14.948:5:0:0:5:164:-10,-1.50515,0 1/1:48.0613:16:0:0:16:581:-10,-4.81648,0 0/0:43.1262:13:13:492:0:0:0,-3.91339,-10 0/0:88.28:28:28:1041:0:0:0,-8.42884,-10 0/0:40.1159:12:12:427:0:0:0,-3.61236,-10 0/0:99:36:35:1255:0:0:0,-10,-10 0/0:34.0953:10:10:355:0:0:0,-3.0103,-10 1/1:26.9892:9:0:0:9:340:-10,-2.70927,0 0/1:99:33:17:619:16:576:-10,0,-10 0/1:84.2344:17:14:496:3:114:-8.355,0,-10 0/0:40.1159:12:12:429:0:0:0,-3.61236,-10 0/0:70.2189:22:22:802:0:0:0,-6.62266,-10 0/0:34.0953:10:10:355:0:0:0,-3.0103,-10 0/0:49.1468:15:15:570:0:0:0,-4.51545,-10 0/0:73.2292:23:23:861:0:0:0,-6.92369,-10 0/0:85.27:27:27:1013:0:0:0,-8.12781,-10 0/0:49.1468:15:15:557:0:0:0,-4.51545,-10 0/0:73.2292:23:23:846:0:0:0,-6.92369,-10 0/0:28.0747:8:8:304:0:0:0,-2.40824,-10 0/0:37.1056:11:11:418:0:0:0,-3.31133,-10 1/1:29.9995:10:0:0:10:376:-10,-3.0103,0 0/0:28.0747:8:8:298:0:0:0,-2.40824,-10 0/0:34.0953:10:10:358:0:0:0,-3.0103,-10 0/0:99:34:34:1284:0:0:0,-10,-10 0/1:99:26:15:554:11:418:-10,0,-10 0/1:99:20:11:411:9:341:-10,0,-10 0/1:99:16:10:359:6:205:-10,0,-10 0/0:91.2895:29:29:1100:0:0:0,-8.72987,-10 0/0:25.0644:7:7:264:0:0:0,-2.10721,-10 1/1:45.051:15:0:0:15:526:-10,-4.51545,0 0/0:34.0953:10:10:378:0:0:0,-3.0103,-10 0/1:69.0853:6:4:146:2:76:-6.58991,0,-10 0/0:34.0953:10:10:380:0:0:0,-3.0103,-10 0/1:99:13:6:222:7:265:-10,0,-10 0/0:43.1262:13:13:486:0:0:0,-3.91339,-10 scaffold_56 3136989 . C T 363.254 . AB=0.68;ABP=10.0459;AC=2;AF=0.0108696;AN=184;AO=19;CIGAR=1X;DP=1492;DPB=1492;DPRA=1.18079;EPP=3.12459;EPPR=3.18868;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.981;NS=92;NUMALT=1;ODDS=5.77539;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=659;QR=54216;RO=1473;RPP=44.2683;RPPR=3021.79;RUN=1;SAF=9;SAP=3.12459;SAR=10;SRF=763;SRP=7.15128;SRR=710;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.0776:7:7:266:0:0:0,-2.10721,-10 0/0:73.16:15:15:545:0:0:0,-4.51545,-10 0/0:61.1188:11:11:394:0:0:0,-3.31133,-10 0/0:46.0673:6:6:227:0:0:0,-1.80618,-10 0/1:99:13:8:300:5:186:-10,0,-10 0/0:61.1188:11:11:407:0:0:0,-3.31133,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:99:26:26:982:0:0:0,-7.82678,-10 0/0:67.1394:13:13:466:0:0:0,-3.91339,-10 0/0:34.0261:2:2:76:0:0:0,-0.60206,-7.22 0/0:58.1085:10:10:371:0:0:0,-3.0103,-10 0/0:52.0879:8:8:304:0:0:0,-2.40824,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:88.2113:20:20:708:0:0:0,-6.0206,-10 0/0:88.2113:20:20:733:0:0:0,-6.0206,-10 0/0:73.16:15:15:543:0:0:0,-4.51545,-10 0/0:73.16:15:15:562:0:0:0,-4.51545,-10 0/0:40.0467:4:4:143:0:0:0,-1.20412,-10 0/0:79.1806:17:17:597:0:0:0,-5.11751,-10 0/0:99:30:30:1054:0:0:0,-9.0309,-10 0/0:64.1291:12:12:451:0:0:0,-3.61236,-10 0/0:99:31:31:1164:0:0:0,-9.33193,-10 0/0:70.1497:14:14:515:0:0:0,-4.21442,-10 0/0:85.2011:19:19:694:0:0:0,-5.71957,-10 0/0:61.1188:11:11:389:0:0:0,-3.31133,-10 0/0:82.1909:18:18:673:0:0:0,-5.41854,-10 0/0:79.1806:17:17:587:0:0:0,-5.11751,-10 0/0:49.0776:7:7:264:0:0:0,-2.10721,-10 0/0:64.1291:12:12:405:0:0:0,-3.61236,-10 0/0:85.2011:19:19:720:0:0:0,-5.71957,-10 0/0:52.0879:8:8:302:0:0:0,-2.40824,-10 0/0:58.1085:10:10:374:0:0:0,-3.0103,-10 0/0:64.1291:12:12:432:0:0:0,-3.61236,-10 0/0:76.1703:16:16:598:0:0:0,-4.81648,-10 0/0:61.1188:11:11:396:0:0:0,-3.31133,-10 0/0:34.0261:2:2:76:0:0:0,-0.60206,-7.22 0/0:73.16:15:15:508:0:0:0,-4.51545,-10 0/0:99:24:24:909:0:0:0,-7.22472,-10 0/0:70.1497:14:14:515:0:0:0,-4.21442,-10 0/0:67.1394:13:13:482:0:0:0,-3.91339,-10 0/0:91.2213:21:21:789:0:0:0,-6.32163,-10 0/0:73.16:15:15:544:0:0:0,-4.51545,-10 0/0:43.057:5:5:183:0:0:0,-1.50515,-10 0/0:99:35:35:1292:0:0:0,-10,-10 0/0:99:24:24:904:0:0:0,-7.22472,-10 0/0:58.1085:10:10:380:0:0:0,-3.0103,-10 0/0:99:28:28:1058:0:0:0,-8.42884,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:67.1394:13:13:481:0:0:0,-3.91339,-10 0/0:99:29:29:1055:0:0:0,-8.72987,-10 0/0:64.1291:12:12:450:0:0:0,-3.61236,-10 0/0:99:32:32:1134:0:0:0,-9.63296,-10 0/0:76.1703:16:16:591:0:0:0,-4.81648,-10 0/0:31.0158:1:1:36:0:0:0,-0.30103,-3.6 0/0:99:42:42:1529:0:0:0,-10,-10 0/0:49.0776:7:7:266:0:0:0,-2.10721,-10 0/0:55.0982:9:9:339:0:0:0,-2.70927,-10 0/0:43.057:5:5:180:0:0:0,-1.50515,-10 0/0:76.1703:16:16:588:0:0:0,-4.81648,-10 0/0:67.1394:13:13:493:0:0:0,-3.91339,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:64.1291:12:12:439:0:0:0,-3.61236,-10 0/0:99:36:35:1295:1:16:0,-7.68078,-10 0/0:58.1085:10:10:356:0:0:0,-3.0103,-10 0/0:55.0982:9:9:342:0:0:0,-2.70927,-10 0/0:99:33:33:1175:0:0:0,-9.93399,-10 0/0:79.1806:17:17:611:0:0:0,-5.11751,-10 0/1:0.000256451:12:0:0:12:419:-10,-3.61236,0 0/0:94.2312:22:22:825:0:0:0,-6.62266,-10 0/0:58.1085:10:10:348:0:0:0,-3.0103,-10 0/0:73.16:15:15:548:0:0:0,-4.51545,-10 0/0:97.2405:23:23:850:0:0:0,-6.92369,-10 0/0:99:27:27:1001:0:0:0,-8.12781,-10 0/0:73.16:15:15:560:0:0:0,-4.51545,-10 0/0:97.2405:23:23:861:0:0:0,-6.92369,-10 0/0:52.0879:8:8:303:0:0:0,-2.40824,-10 0/0:61.1188:11:11:417:0:0:0,-3.31133,-10 0/0:58.1085:10:10:358:0:0:0,-3.0103,-10 0/0:52.0879:8:8:271:0:0:0,-2.40824,-10 0/0:58.1085:10:10:376:0:0:0,-3.0103,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:99:26:26:985:0:0:0,-7.82678,-10 0/0:88.2113:20:20:758:0:0:0,-6.0206,-10 0/0:76.1703:16:16:569:0:0:0,-4.81648,-10 0/0:99:29:29:1102:0:0:0,-8.72987,-10 0/0:49.0776:7:7:262:0:0:0,-2.10721,-10 0/0:0.0134284:15:14:514:1:38:-0.460641,0,-10 0/0:58.1085:10:10:378:0:0:0,-3.0103,-10 0/0:46.0673:6:6:228:0:0:0,-1.80618,-10 0/0:58.1085:10:10:380:0:0:0,-3.0103,-10 0/0:67.1394:13:13:450:0:0:0,-3.91339,-10 0/0:67.1394:13:13:494:0:0:0,-3.91339,-10 scaffold_56 3243341 . G A 141.365 . AB=0.583333;ABP=3.73412;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1X;DP=1723;DPB=1723;DPRA=0.638223;EPP=3.32051;EPPR=9.03851;GTI=0;LEN=1;MEANALT=1;MQM=22;MQMR=31.4408;NS=92;NUMALT=1;ODDS=12.5328;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=255;QR=62957;RO=1715;RPP=18.2106;RPPR=3709.73;RUN=1;SAF=3;SAP=3.32051;SAR=4;SRF=825;SRP=8.35985;SRR=890;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.5117:11:11:414:0:0:0,-3.31133,-10 0/0:75.5014:10:10:357:0:0:0,-3.0103,-10 0/0:99:30:30:1073:0:0:0,-9.0309,-10 0/0:99:18:18:679:0:0:0,-5.41854,-10 0/0:60.45:5:5:187:0:0:0,-1.50515,-10 0/0:66.4706:7:7:263:0:0:0,-2.10721,-10 0/0:99:25:25:909:0:0:0,-7.52575,-10 0/1:99:12:5:190:7:255:-10,0,-10 0/0:84.532:13:13:483:0:0:0,-3.91339,-10 0/0:57.4397:4:4:130:0:0:0,-1.20412,-10 0/0:63.4603:6:6:226:0:0:0,-1.80618,-10 0/0:60.45:5:5:171:0:0:0,-1.50515,-10 0/0:99:29:29:1051:0:0:0,-8.72987,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:99:35:35:1298:0:0:0,-10,-10 0/0:84.532:13:13:479:0:0:0,-3.91339,-10 0/0:96.5682:17:17:594:0:0:0,-5.11751,-10 0/0:72.4912:9:9:337:0:0:0,-2.70927,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:99:40:40:1506:0:0:0,-10,-10 0/0:99:18:18:681:0:0:0,-5.41854,-10 0/0:99:26:26:965:0:0:0,-7.82678,-10 0/0:75.5014:10:10:364:0:0:0,-3.0103,-10 0/0:87.5425:14:14:525:0:0:0,-4.21442,-10 0/0:87.5425:14:14:503:0:0:0,-4.21442,-10 0/0:99:20:20:732:0:0:0,-6.0206,-10 0/0:99:19:19:688:0:0:0,-5.71957,-10 0/0:90.5516:15:15:568:0:0:0,-4.51545,-10 0/0:99:25:25:906:0:0:0,-7.52575,-10 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:72.4912:9:9:330:0:0:0,-2.70927,-10 0/0:75.5014:10:10:345:0:0:0,-3.0103,-10 0/0:99:20:20:714:0:0:0,-6.0206,-10 0/0:84.532:13:13:471:0:0:0,-3.91339,-10 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:75.5014:10:10:379:0:0:0,-3.0103,-10 0/0:99:18:18:675:0:0:0,-5.41854,-10 0/0:99:22:22:799:0:0:0,-6.62266,-10 0/0:93.5606:16:16:604:0:0:0,-4.81648,-10 0/0:99:19:19:691:0:0:0,-5.71957,-10 0/0:99:26:26:957:0:0:0,-7.82678,-10 0/0:84.532:13:13:487:0:0:0,-3.91339,-10 0/0:90.5516:15:15:563:0:0:0,-4.51545,-10 0/0:99:34:33:1215:0:0:0,-9.93399,-10 0/0:99:23:23:838:0:0:0,-6.92369,-10 0/0:69.4809:8:8:278:0:0:0,-2.40824,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:84.532:13:13:489:0:0:0,-3.91339,-10 0/0:99:40:40:1474:0:0:0,-10,-10 0/0:54.4294:3:3:114:0:0:0,-0.90309,-10 0/0:99:38:38:1388:0:0:0,-10,-10 0/0:99:23:23:868:0:0:0,-6.92369,-10 0/0:63.4603:6:6:222:0:0:0,-1.80618,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:75.5014:10:10:349:0:0:0,-3.0103,-10 0/0:99:25:25:886:0:0:0,-7.52575,-10 0/0:57.4397:4:4:152:0:0:0,-1.20412,-10 0/0:87.5425:14:14:507:0:0:0,-4.21442,-10 0/0:99:22:22:789:0:0:0,-6.62266,-10 0/0:99:27:27:1020:0:0:0,-8.12781,-10 0/0:93.5606:16:16:568:0:0:0,-4.81648,-10 0/0:99:40:40:1478:0:0:0,-10,-10 0/0:90.5516:15:15:536:0:0:0,-4.51545,-10 0/0:96.5682:17:17:615:0:0:0,-5.11751,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:87.5425:14:14:505:0:0:0,-4.21442,-10 0/0:93.5606:16:16:606:0:0:0,-4.81648,-10 0/0:99:36:36:1310:0:0:0,-10,-10 0/0:84.532:13:13:482:0:0:0,-3.91339,-10 0/0:90.5516:15:15:530:0:0:0,-4.51545,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:99:24:24:900:0:0:0,-7.22472,-10 0/0:99:20:20:738:0:0:0,-6.0206,-10 0/0:99:40:40:1507:0:0:0,-10,-10 0/0:87.5425:14:14:504:0:0:0,-4.21442,-10 0/0:84.532:13:13:494:0:0:0,-3.91339,-10 0/0:84.532:13:13:490:0:0:0,-3.91339,-10 0/0:72.4912:9:9:333:0:0:0,-2.70927,-10 0/0:69.4809:8:8:266:0:0:0,-2.40824,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:99:31:31:1136:0:0:0,-9.33193,-10 0/0:99:21:21:785:0:0:0,-6.32163,-10 0/0:90.5516:15:15:569:0:0:0,-4.51545,-10 0/0:93.5606:16:16:565:0:0:0,-4.81648,-10 0/0:54.4294:3:3:114:0:0:0,-0.90309,-10 0/0:78.5117:11:11:399:0:0:0,-3.31133,-10 0/0:72.4912:9:9:341:0:0:0,-2.70927,-10 0/0:63.4603:6:6:215:0:0:0,-1.80618,-10 0/0:96.5682:17:17:632:0:0:0,-5.11751,-10 0/0:99:18:18:657:0:0:0,-5.41854,-10 0/0:78.5117:11:11:402:0:0:0,-3.31133,-10 scaffold_56 3243377 . C T 8306.23 . AB=0.498339;ABP=3.01751;AC=31;AF=0.168478;AN=184;AO=301;CIGAR=1X;DP=1718;DPB=1718;DPRA=1.17038;EPP=6.82661;EPPR=5.98341;GTI=2;LEN=1;MEANALT=1.04545;MQM=46.4186;MQMR=28.0983;NS=92;NUMALT=1;ODDS=0.111598;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11052;QR=50210;RO=1414;RPP=656.623;RPPR=3073.47;RUN=1;SAF=139;SAP=6.82661;SAR=162;SRF=685;SRP=5.98341;SRR=729;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:38.8236:11:11:389:0:0:0,-3.31133,-10 0/0:35.8133:10:10:303:0:0:0,-3.0103,-10 0/1:99:30:14:480:16:581:-10,0,-10 1/1:33.9934:18:0:0:18:676:-10,-5.41854,0 0/0:20.7618:5:5:190:0:0:0,-1.50515,-10 0/0:26.7824:7:7:264:0:0:0,-2.10721,-10 0/0:80.9678:25:25:915:0:0:0,-7.52575,-10 0/0:41.8339:12:12:425:0:0:0,-3.61236,-10 0/0:44.8442:13:13:444:0:0:0,-3.91339,-10 0/0:17.7515:4:4:130:0:0:0,-1.20412,-10 0/0:23.7721:6:6:191:0:0:0,-1.80618,-10 0/0:20.7618:5:5:174:0:0:0,-1.50515,-10 0/0:93.0091:29:29:991:0:0:0,-8.72987,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/0:99:35:35:1255:0:0:0,-10,-10 0/0:44.8442:13:13:475:0:0:0,-3.91339,-10 0/0:56.8854:17:17:578:0:0:0,-5.11751,-10 0/0:32.803:9:9:338:0:0:0,-2.70927,-10 0/1:99:32:18:621:14:478:-10,0,-10 0/1:99:40:22:812:18:669:-10,0,-10 0/1:99:18:9:321:9:333:-10,0,-10 0/0:83.9779:26:26:961:0:0:0,-7.82678,-10 0/0:35.8133:10:10:362:0:0:0,-3.0103,-10 0/0:47.8545:14:14:473:0:0:0,-4.21442,-10 1/1:18.9419:14:0:0:13:483:-10,-3.91339,0 0/0:65.9163:20:20:692:0:0:0,-6.0206,-10 0/0:59.8957:18:18:619:0:0:0,-5.41854,-10 0/0:50.8648:15:15:558:0:0:0,-4.51545,-10 0/0:77.9575:24:24:841:0:0:0,-7.22472,-10 0/0:99:35:35:1280:0:0:0,-10,-10 0/0:32.803:9:9:307:0:0:0,-2.70927,-10 0/0:35.8133:10:10:358:0:0:0,-3.0103,-10 1/1:40.014:20:0:0:20:744:-10,-6.0206,0 0/0:44.8442:13:13:466:0:0:0,-3.91339,-10 0/0:74.9472:23:23:809:0:0:0,-6.92369,-10 1/1:9.91104:10:0:0:10:378:-10,-3.0103,0 0/0:59.8957:18:18:647:0:0:0,-5.41854,-10 0/1:99:21:11:405:10:364:-10,0,-10 1/1:27.9728:16:0:0:16:608:-10,-4.81648,0 0/1:99:19:10:369:9:337:-10,0,-10 0/0:83.9779:26:26:922:0:0:0,-7.82678,-10 0/0:44.8442:13:13:461:0:0:0,-3.91339,-10 1/1:24.9625:15:0:0:15:548:-10,-4.51545,0 0/0:99:33:32:1131:0:0:0,-9.63296,-10 0/0:74.9472:23:23:849:0:0:0,-6.92369,-10 0/0:29.7927:8:8:280:0:0:0,-2.40824,-10 0/0:99:33:33:1119:0:0:0,-9.93399,-10 0/0:80.9678:25:25:896:0:0:0,-7.52575,-10 0/0:44.8442:13:13:474:0:0:0,-3.91339,-10 0/1:99:40:20:701:20:738:-10,0,-10 0/0:14.7412:3:3:99:0:0:0,-0.90309,-9.24 0/0:99:37:37:1295:0:0:0,-10,-10 0/0:74.9472:23:23:839:0:0:0,-6.92369,-10 0/0:23.7721:6:6:227:0:0:0,-1.80618,-10 0/0:99:34:34:1245:0:0:0,-10,-10 0/0:1.19979:10:9:316:1:22:-0.1897,0,-10 0/0:80.9678:25:25:876:0:0:0,-7.52575,-10 0/0:17.7515:4:4:149:0:0:0,-1.20412,-10 0/0:47.8545:14:14:452:0:0:0,-4.21442,-10 0/0:71.9369:22:22:777:0:0:0,-6.62266,-10 0/0:86.9884:27:27:915:0:0:0,-8.12781,-10 0/0:53.8751:16:16:561:0:0:0,-4.81648,-10 0/1:99:40:23:847:17:619:-10,0,-10 0/0:50.8648:15:15:541:0:0:0,-4.51545,-10 1/1:30.9831:17:0:0:17:615:-10,-5.11751,0 0/0:89.9977:28:28:1015:0:0:0,-8.42884,-10 0/0:47.8545:14:14:490:0:0:0,-4.21442,-10 0/0:53.8751:16:16:578:0:0:0,-4.81648,-10 0/0:99:36:36:1264:0:0:0,-10,-10 0/0:44.8442:13:13:467:0:0:0,-3.91339,-10 0/0:50.8648:15:15:534:0:0:0,-4.51545,-10 0/0:99:36:36:1219:0:0:0,-10,-10 0/0:77.9575:24:24:881:0:0:0,-7.22472,-10 0/0:65.9163:20:20:708:0:0:0,-6.0206,-10 0/0:99:40:40:1417:0:0:0,-10,-10 0/0:47.8545:14:14:424:0:0:0,-4.21442,-10 0/0:44.8442:13:13:480:0:0:0,-3.91339,-10 1/1:18.9419:13:0:0:13:467:-10,-3.91339,0 0/1:0.78802:9:0:0:9:341:-10,-2.70927,0 0/0:29.7927:8:8:262:0:0:0,-2.40824,-10 0/1:99:31:18:658:13:489:-10,0,-10 0/0:96.0194:31:30:1081:0:0:0,-9.0309,-10 0/1:99:21:6:224:15:541:-10,0,-10 0/0:50.8648:15:15:569:0:0:0,-4.51545,-10 0/0:53.8751:16:16:592:0:0:0,-4.81648,-10 0/0:14.7412:3:3:113:0:0:0,-0.90309,-10 0/0:38.8236:11:11:411:0:0:0,-3.31133,-10 0/0:32.803:9:9:319:0:0:0,-2.70927,-10 0/0:23.7721:6:6:199:0:0:0,-1.80618,-10 1/1:30.9831:17:0:0:17:619:-10,-5.11751,0 0/0:59.8957:18:18:644:0:0:0,-5.41854,-10 1/1:12.9213:11:0:0:11:402:-10,-3.31133,0 scaffold_56 3249499 . G A 1395.59 . AB=0.682927;ABP=26.8435;AC=5;AF=0.0271739;AN=184;AO=58;CIGAR=1X;DP=1955;DPB=1955;DPRA=0.907877;EPP=3.16006;EPPR=3.20375;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=2.13111;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2095;QR=70006;RO=1897;RPP=128.956;RPPR=4104.94;RUN=1;SAF=30;SAP=3.16006;SAR=28;SRF=944;SRP=3.10302;SRR=953;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:51.5456:10:10:347:0:0:0,-3.0103,-10 0/0:48.5353:9:9:336:0:0:0,-2.70927,-10 0/0:78.6383:19:19:714:0:0:0,-5.71957,-10 0/0:54.5559:11:11:417:0:0:0,-3.31133,-10 0/0:48.5353:9:9:342:0:0:0,-2.70927,-10 0/0:27.4632:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:78.6383:19:19:714:0:0:0,-5.71957,-10 0/0:60.5765:13:13:486:0:0:0,-3.91339,-10 0/0:24.4529:1:1:38:0:0:0,-0.30103,-3.8 0/0:45.525:8:8:303:0:0:0,-2.40824,-10 0/0:42.5147:7:7:265:0:0:0,-2.10721,-10 0/0:99:30:30:1045:0:0:0,-9.0309,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:96.698:25:25:918:0:0:0,-7.52575,-10 0/0:81.6485:20:20:742:0:0:0,-6.0206,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:42.5147:7:7:244:0:0:0,-2.10721,-10 0/0:99:31:31:1157:0:0:0,-9.33193,-10 0/0:99:38:38:1379:0:0:0,-10,-10 0/0:69.6074:16:16:596:0:0:0,-4.81648,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:60.5765:13:13:472:0:0:0,-3.91339,-10 0/0:96.698:25:25:914:0:0:0,-7.52575,-10 0/0:93.6887:24:24:901:0:0:0,-7.22472,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/0:87.6689:22:22:822:0:0:0,-6.62266,-10 0/0:90.679:23:23:855:0:0:0,-6.92369,-10 0/0:99:33:33:1229:0:0:0,-9.93399,-10 0/0:99:36:36:1350:0:0:0,-10,-10 0/0:45.525:8:8:302:0:0:0,-2.40824,-10 0/0:0.445094:11:10:367:1:37:-1.43006,0,-10 0/0:78.6383:19:19:689:0:0:0,-5.71957,-10 0/0:78.6383:19:19:705:0:0:0,-5.71957,-10 0/0:69.6074:16:16:591:0:0:0,-4.81648,-10 0/0:36.4941:5:5:190:0:0:0,-1.50515,-10 0/0:72.6177:17:17:640:0:0:0,-5.11751,-10 0/0:99:31:31:1172:0:0:0,-9.33193,-10 0/0:69.6074:16:16:588:0:0:0,-4.81648,-10 0/0:57.5662:12:12:452:0:0:0,-3.61236,-10 0/0:99:34:34:1285:0:0:0,-10,-10 0/0:99:32:32:1179:0:0:0,-9.63296,-10 0/0:84.6588:21:21:784:0:0:0,-6.32163,-10 0/0:99:40:40:1448:0:0:0,-10,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:72.6177:17:17:579:0:0:0,-5.11751,-10 0/0:99:49:49:1806:0:0:0,-10,-10 0/0:99:31:31:1168:0:0:0,-9.33193,-10 0/0:66.5971:15:15:546:0:0:0,-4.51545,-10 0/0:99:42:42:1558:0:0:0,-10,-10 0/0:69.6074:16:16:597:0:0:0,-4.81648,-10 0/0:99:42:42:1521:0:0:0,-10,-10 0/0:87.6689:22:22:827:0:0:0,-6.62266,-10 0/0:42.5147:7:7:258:0:0:0,-2.10721,-10 0/0:99:50:50:1842:0:0:0,-10,-10 0/0:51.5456:10:10:372:0:0:0,-3.0103,-10 0/0:90.679:23:23:871:0:0:0,-6.92369,-10 0/0:54.5559:11:11:418:0:0:0,-3.31133,-10 0/0:84.6588:21:21:732:0:0:0,-6.32163,-10 0/1:0.311569:16:0:0:16:560:-10,-4.81648,0 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:48.5353:9:9:337:0:0:0,-2.70927,-10 0/0:98.92:43:42:1511:1:38:0,-7.51082,-10 0/0:66.5971:15:15:566:0:0:0,-4.51545,-10 0/0:57.5662:12:12:425:0:0:0,-3.61236,-10 0/0:99:31:31:1132:0:0:0,-9.33193,-10 0/0:78.6383:19:19:688:0:0:0,-5.71957,-10 0/0:51.5456:10:10:369:0:0:0,-3.0103,-10 0/0:99:44:44:1604:0:0:0,-10,-10 0/0:57.5662:12:12:425:0:0:0,-3.61236,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:99:39:39:1463:0:0:0,-10,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:87.6689:22:22:812:0:0:0,-6.62266,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:63.5868:14:14:527:0:0:0,-4.21442,-10 0/0:57.5662:12:12:448:0:0:0,-3.61236,-10 0/0:72.6177:17:17:625:0:0:0,-5.11751,-10 0/1:0.0023495:9:0:0:9:342:-10,-2.70927,0 0/0:45.525:8:8:303:0:0:0,-2.40824,-10 0/1:99:42:19:688:23:859:-10,0,-10 0/0:99:42:42:1541:0:0:0,-10,-10 0/0:99:30:30:1100:0:0:0,-9.0309,-10 0/0:78.6383:19:19:710:0:0:0,-5.71957,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:30.4735:3:3:114:0:0:0,-0.90309,-10 0/0:57.5662:12:12:445:0:0:0,-3.61236,-10 0/0:81.6485:20:20:742:0:0:0,-6.0206,-10 0/1:82.1679:7:1:38:6:205:-10,0,-2.53789 0/0:48.5353:9:9:342:0:0:0,-2.70927,-10 0/1:22.7117:8:6:226:2:54:-4.16892,0,-10 0/0:48.5353:9:9:342:0:0:0,-2.70927,-10 scaffold_56 3329031 . A G 404.089 . AB=0.5;ABP=3.0103;AC=2;AF=0.0108696;AN=184;AO=18;CIGAR=1X;DP=1254;DPB=1254;DPRA=1.43868;EPP=4.9405;EPPR=11.1472;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9603;NS=92;NUMALT=1;ODDS=6.5129;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=659;QR=45479;RO=1234;RPP=42.0968;RPPR=2613.57;RUN=1;SAF=11;SAP=4.9405;SAR=7;SRF=591;SRP=7.76853;SRR=643;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.4264:13:13:465:0:0:0,-3.91339,-10 0/0:52.3955:10:10:369:0:0:0,-3.0103,-10 0/0:58.4161:12:12:452:0:0:0,-3.61236,-10 0/0:46.3749:8:8:304:0:0:0,-2.40824,-10 0/0:58.4161:12:12:440:0:0:0,-3.61236,-10 0/0:37.344:5:5:188:0:0:0,-1.50515,-10 0/0:99:28:28:1060:0:0:0,-8.42884,-10 0/0:85.5087:21:21:779:0:0:0,-6.32163,-10 0/0:52.3955:10:10:378:0:0:0,-3.0103,-10 0/0:43.3646:7:7:253:0:0:0,-2.10721,-10 0/0:40.3543:6:6:220:0:0:0,-1.80618,-10 0/0:43.3646:7:7:265:0:0:0,-2.10721,-10 0/0:91.5285:23:23:855:0:0:0,-6.92369,-10 0/0:73.4676:17:17:645:0:0:0,-5.11751,-10 0/0:99:26:26:986:0:0:0,-7.82678,-10 0/0:88.519:22:22:816:0:0:0,-6.62266,-10 0/0:76.4779:18:18:683:0:0:0,-5.41854,-10 0/0:31.3234:3:3:114:0:0:0,-0.90309,-10 0/0:52.3955:10:10:380:0:0:0,-3.0103,-10 0/0:94.5392:24:24:850:0:0:0,-7.22472,-10 0/0:73.4676:17:17:595:0:0:0,-5.11751,-10 0/0:79.4882:19:19:711:0:0:0,-5.71957,-10 0/0:28.3131:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:28:28:1059:0:0:0,-8.42884,-10 0/0:82.4985:20:20:722:0:0:0,-6.0206,-10 0/0:82.4985:20:20:697:0:0:0,-6.0206,-10 0/0:70.4573:16:16:598:0:0:0,-4.81648,-10 0/0:58.4161:12:12:404:0:0:0,-3.61236,-10 0/0:58.4161:12:12:445:0:0:0,-3.61236,-10 0/0:91.5285:23:23:818:0:0:0,-6.92369,-10 0/0:31.3234:3:3:112:0:0:0,-0.90309,-10 0/0:31.3234:3:3:91:0:0:0,-0.90309,-8.49333 0/0:52.3955:10:10:380:0:0:0,-3.0103,-10 0/0:46.3749:8:8:303:0:0:0,-2.40824,-10 0/0:43.3646:7:7:266:0:0:0,-2.10721,-10 0/0:37.344:5:5:187:0:0:0,-1.50515,-10 0/0:67.447:15:15:567:0:0:0,-4.51545,-10 0/0:61.4264:13:13:494:0:0:0,-3.91339,-10 0/0:34.3337:4:4:130:0:0:0,-1.20412,-10 0/1:99:12:6:228:6:214:-10,0,-10 0/0:94.5392:24:24:886:0:0:0,-7.22472,-10 0/0:61.4264:14:13:468:0:0:0,-3.91339,-10 0/0:64.4367:14:14:499:0:0:0,-4.21442,-10 0/1:99:22:11:416:11:407:-10,0,-10 0/0:64.4367:14:14:507:0:0:0,-4.21442,-10 0/0:64.4367:14:14:527:0:0:0,-4.21442,-10 0/0:88.519:22:22:831:0:0:0,-6.62266,-10 0/0:82.4985:20:20:744:0:0:0,-6.0206,-10 0/0:55.4058:11:11:413:0:0:0,-3.31133,-10 0/0:99:27:27:991:0:0:0,-8.12781,-10 0/0:46.3749:8:8:288:0:0:0,-2.40824,-10 0/0:97.5491:25:25:936:0:0:0,-7.52575,-10 0/0:37.344:5:5:189:0:0:0,-1.50515,-10 0/0:37.344:5:5:188:0:0:0,-1.50515,-10 0/0:61.4264:13:13:437:0:0:0,-3.91339,-10 0/0:37.344:5:5:184:0:0:0,-1.50515,-10 0/0:82.4985:20:20:706:0:0:0,-6.0206,-10 0/0:46.3749:8:8:291:0:0:0,-2.40824,-10 0/0:40.3543:6:6:228:0:0:0,-1.80618,-10 0/0:43.3646:7:7:255:0:0:0,-2.10721,-10 0/0:88.519:22:22:826:0:0:0,-6.62266,-10 0/0:55.4058:11:11:395:0:0:0,-3.31133,-10 0/0:46.9445:24:23:817:1:38:0,-2.04451,-10 0/0:70.4573:16:16:607:0:0:0,-4.81648,-10 0/0:43.3646:7:7:244:0:0:0,-2.10721,-10 0/0:82.4985:20:20:696:0:0:0,-6.0206,-10 0/0:70.4573:16:16:607:0:0:0,-4.81648,-10 0/0:55.4058:11:11:390:0:0:0,-3.31133,-10 0/0:76.4779:18:18:679:0:0:0,-5.41854,-10 0/0:55.4058:11:11:391:0:0:0,-3.31133,-10 0/0:46.3749:8:8:304:0:0:0,-2.40824,-10 0/0:58.4161:12:12:454:0:0:0,-3.61236,-10 0/0:64.4367:14:14:502:0:0:0,-4.21442,-10 0/0:46.3749:8:8:302:0:0:0,-2.40824,-10 0/0:85.5087:21:21:790:0:0:0,-6.32163,-10 0/0:52.3955:10:10:378:0:0:0,-3.0103,-10 0/0:46.3749:8:8:304:0:0:0,-2.40824,-10 0/0:70.4573:16:16:561:0:0:0,-4.81648,-10 0/0:61.4264:13:13:483:0:0:0,-3.91339,-10 0/0:46.3749:8:8:291:0:0:0,-2.40824,-10 0/0:79.4882:19:19:703:0:0:0,-5.71957,-10 0/0:82.4985:20:20:755:0:0:0,-6.0206,-10 0/0:79.4882:19:19:687:0:0:0,-5.71957,-10 0/0:55.4058:12:11:412:0:0:0,-3.31133,-10 0/0:58.4161:12:12:454:0:0:0,-3.61236,-10 0/0:52.3955:10:10:377:0:0:0,-3.0103,-10 0/0:64.4367:14:14:515:0:0:0,-4.21442,-10 0/0:49.3852:9:9:311:0:0:0,-2.70927,-10 0/0:31.3234:3:3:113:0:0:0,-0.90309,-10 0/0:67.447:15:15:565:0:0:0,-4.51545,-10 0/0:64.4367:14:14:525:0:0:0,-4.21442,-10 0/0:76.4779:18:18:672:0:0:0,-5.41854,-10 scaffold_56 3329056 . A G 403.263 . AB=0.515152;ABP=3.0761;AC=2;AF=0.0108696;AN=184;AO=17;CIGAR=1X;DP=1252;DPB=1252;DPRA=1.21821;EPP=9.26925;EPPR=6.41708;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9514;NS=92;NUMALT=1;ODDS=6.5129;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=631;QR=45343;RO=1234;RPP=39.9253;RPPR=2673.93;RUN=1;SAF=5;SAP=9.26925;SAR=12;SRF=594;SRP=6.73383;SRR=640;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.4263:13:13:468:0:0:0,-3.91339,-10 0/0:52.3954:10:10:380:0:0:0,-3.0103,-10 0/0:58.416:12:12:447:0:0:0,-3.61236,-10 0/0:46.3748:8:8:303:0:0:0,-2.40824,-10 0/0:58.416:12:12:425:0:0:0,-3.61236,-10 0/0:37.3439:5:5:189:0:0:0,-1.50515,-10 0/0:99:28:28:1058:0:0:0,-8.42884,-10 0/0:85.5085:21:21:772:0:0:0,-6.32163,-10 0/0:52.3954:10:10:370:0:0:0,-3.0103,-10 0/0:43.3645:7:7:257:0:0:0,-2.10721,-10 0/0:40.3542:6:6:228:0:0:0,-1.80618,-10 0/0:43.3645:7:7:264:0:0:0,-2.10721,-10 0/0:91.5291:23:23:857:0:0:0,-6.92369,-10 0/0:73.4675:17:17:632:0:0:0,-5.11751,-10 0/0:99:26:26:979:0:0:0,-7.82678,-10 0/0:88.5189:22:22:824:0:0:0,-6.62266,-10 0/0:76.4778:18:18:673:0:0:0,-5.41854,-10 0/0:31.3233:3:3:114:0:0:0,-0.90309,-10 0/0:52.3954:10:10:358:0:0:0,-3.0103,-10 0/0:94.5392:24:24:885:0:0:0,-7.22472,-10 0/0:73.4675:17:17:608:0:0:0,-5.11751,-10 0/0:79.4881:19:19:693:0:0:0,-5.71957,-10 0/0:28.313:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:82.4983:20:20:708:0:0:0,-6.0206,-10 0/0:85.5085:21:21:724:0:0:0,-6.32163,-10 0/0:67.4469:15:15:550:0:0:0,-4.51545,-10 0/0:58.416:12:12:399:0:0:0,-3.61236,-10 0/0:58.416:12:12:434:0:0:0,-3.61236,-10 0/0:91.5291:23:23:856:0:0:0,-6.92369,-10 0/0:31.3233:3:3:114:0:0:0,-0.90309,-10 0/0:31.3233:3:3:114:0:0:0,-0.90309,-10 0/0:52.3954:10:10:356:0:0:0,-3.0103,-10 0/0:46.3748:8:8:282:0:0:0,-2.40824,-10 0/0:43.3645:7:7:258:0:0:0,-2.10721,-10 0/0:37.3439:5:5:175:0:0:0,-1.50515,-10 0/0:67.4469:15:15:543:0:0:0,-4.51545,-10 0/0:61.4263:13:13:448:0:0:0,-3.91339,-10 0/0:34.3336:4:4:152:0:0:0,-1.20412,-10 0/0:58.416:12:12:432:0:0:0,-3.61236,-10 0/0:94.5392:24:24:907:0:0:0,-7.22472,-10 0/0:64.4366:14:14:507:0:0:0,-4.21442,-10 0/0:64.4366:14:14:483:0:0:0,-4.21442,-10 0/0:88.5189:22:22:833:0:0:0,-6.62266,-10 0/0:64.4366:14:14:501:0:0:0,-4.21442,-10 0/0:61.4263:13:13:492:0:0:0,-3.91339,-10 0/0:88.5189:22:22:816:0:0:0,-6.62266,-10 0/0:82.4983:20:20:734:0:0:0,-6.0206,-10 0/0:55.4057:11:11:410:0:0:0,-3.31133,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:46.3748:8:8:279:0:0:0,-2.40824,-10 0/0:97.5491:25:25:925:0:0:0,-7.52575,-10 0/0:37.3439:5:5:186:0:0:0,-1.50515,-10 0/0:37.3439:5:5:190:0:0:0,-1.50515,-10 0/0:61.4263:13:13:470:0:0:0,-3.91339,-10 0/0:37.3439:5:5:189:0:0:0,-1.50515,-10 0/0:82.4983:20:20:712:0:0:0,-6.0206,-10 0/0:46.3748:8:8:288:0:0:0,-2.40824,-10 0/0:40.3542:6:6:228:0:0:0,-1.80618,-10 0/0:43.3645:7:7:265:0:0:0,-2.10721,-10 0/0:88.5189:22:22:832:0:0:0,-6.62266,-10 0/0:55.4057:11:11:392:0:0:0,-3.31133,-10 0/0:91.5291:24:23:841:0:0:0,-6.92369,-10 0/0:70.4572:16:16:602:0:0:0,-4.81648,-10 0/0:43.3645:7:7:263:0:0:0,-2.10721,-10 0/0:82.4983:20:20:757:0:0:0,-6.0206,-10 0/0:70.4572:16:16:597:0:0:0,-4.81648,-10 0/0:55.4057:11:11:372:0:0:0,-3.31133,-10 0/0:76.4778:18:18:670:0:0:0,-5.41854,-10 0/0:55.4057:11:11:369:0:0:0,-3.31133,-10 0/0:46.3748:8:8:302:0:0:0,-2.40824,-10 0/1:99:12:6:221:6:218:-10,0,-10 0/0:64.4366:14:14:515:0:0:0,-4.21442,-10 0/0:46.3748:8:8:303:0:0:0,-2.40824,-10 0/1:99:21:10:375:11:413:-10,0,-10 0/0:52.3954:10:10:377:0:0:0,-3.0103,-10 0/0:46.3748:8:8:304:0:0:0,-2.40824,-10 0/0:70.4572:16:16:588:0:0:0,-4.81648,-10 0/0:61.4263:13:13:493:0:0:0,-3.91339,-10 0/0:46.3748:8:8:298:0:0:0,-2.40824,-10 0/0:79.4881:19:19:712:0:0:0,-5.71957,-10 0/0:82.4983:20:20:753:0:0:0,-6.0206,-10 0/0:79.4881:19:19:703:0:0:0,-5.71957,-10 0/0:58.416:12:12:430:0:0:0,-3.61236,-10 0/0:58.416:12:12:452:0:0:0,-3.61236,-10 0/0:49.3851:9:9:342:0:0:0,-2.70927,-10 0/0:64.4366:14:14:476:0:0:0,-4.21442,-10 0/0:49.3851:9:9:293:0:0:0,-2.70927,-10 0/0:31.3233:3:3:114:0:0:0,-0.90309,-10 0/0:67.4469:15:15:551:0:0:0,-4.51545,-10 0/0:64.4366:14:14:531:0:0:0,-4.21442,-10 0/0:76.4778:18:18:651:0:0:0,-5.41854,-10 scaffold_56 3401907 . C A 143.44 . AB=0.583333;ABP=3.73412;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1X;DP=1848;DPB=1848;DPRA=0.594771;EPP=5.80219;EPPR=6.08488;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9913;NS=92;NUMALT=1;ODDS=13.2013;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=263;QR=67382;RO=1837;RPP=18.2106;RPPR=3594.21;RUN=1;SAF=2;SAP=5.80219;SAR=5;SRF=949;SRP=7.4088;SRR=888;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:17:17:604:0:0:0,-5.11751,-10 0/0:99:23:23:838:0:0:0,-6.92369,-10 0/0:99:17:17:614:0:0:0,-5.11751,-10 0/0:87.4355:13:13:483:0:0:0,-3.91339,-10 0/0:99:20:20:752:0:0:0,-6.0206,-10 0/0:84.4252:12:12:414:0:0:0,-3.61236,-10 0/0:99:43:42:1524:0:0:0,-10,-10 0/0:99:31:31:1087:0:0:0,-9.33193,-10 0/0:99:18:18:649:0:0:0,-5.41854,-10 0/0:72.384:8:8:279:0:0:0,-2.40824,-10 0/0:78.4046:10:10:380:0:0:0,-3.0103,-10 0/0:81.4149:11:11:408:0:0:0,-3.31133,-10 0/0:99:36:36:1328:0:0:0,-10,-10 0/0:99:37:36:1357:0:0:0,-10,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:99:23:23:834:0:0:0,-6.92369,-10 0/0:84.4252:12:12:409:0:0:0,-3.61236,-10 0/0:99:25:25:902:0:0:0,-7.52575,-10 0/0:99:31:31:1156:0:0:0,-9.33193,-10 0/0:81.4149:11:11:409:0:0:0,-3.31133,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:75.3943:9:9:309:0:0:0,-2.70927,-10 0/0:99:28:27:1013:0:0:0,-8.12781,-10 0/0:93.456:15:15:570:0:0:0,-4.51545,-10 0/0:99:25:25:893:0:0:0,-7.52575,-10 0/0:99:17:17:608:0:0:0,-5.11751,-10 0/0:75.3943:9:9:330:0:0:0,-2.70927,-10 0/0:81.4149:11:11:413:0:0:0,-3.31133,-10 0/0:99:33:33:1244:0:0:0,-9.93399,-10 0/0:66.3634:6:6:227:0:0:0,-1.80618,-10 0/0:57.3325:3:3:114:0:0:0,-0.90309,-10 0/0:90.4458:14:14:509:0:0:0,-4.21442,-10 0/0:99:19:19:683:0:0:0,-5.71957,-10 0/0:96.4617:16:16:595:0:0:0,-4.81648,-10 0/0:78.4046:10:10:375:0:0:0,-3.0103,-10 0/0:75.3943:9:9:338:0:0:0,-2.70927,-10 0/0:99:31:31:1172:0:0:0,-9.33193,-10 0/0:78.4046:10:10:304:0:0:0,-3.0103,-10 0/1:99:12:5:180:7:263:-10,0,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:99:22:22:823:0:0:0,-6.62266,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:99:40:40:1467:0:0:0,-10,-10 0/0:99:32:32:1138:0:0:0,-9.63296,-10 0/0:99:17:17:631:0:0:0,-5.11751,-10 0/0:99:45:45:1668:0:0:0,-10,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:90.4458:14:14:521:0:0:0,-4.21442,-10 0/0:99:26:26:969:0:0:0,-7.82678,-10 0/0:93.456:15:15:546:0:0:0,-4.51545,-10 0/0:99:39:38:1341:0:0:0,-10,-10 0/0:81.4149:11:11:408:0:0:0,-3.31133,-10 0/0:75.3943:9:9:331:0:0:0,-2.70927,-10 0/0:99:52:52:1856:0:0:0,-10,-10 0/0:99:17:17:644:0:0:0,-5.11751,-10 0/0:99:18:18:648:0:0:0,-5.41854,-10 0/0:87.4355:13:13:484:0:0:0,-3.91339,-10 0/0:99:29:29:1047:0:0:0,-8.72987,-10 0/0:99:19:19:692:0:0:0,-5.71957,-10 0/0:99:24:24:885:0:0:0,-7.22472,-10 0/0:90.4458:14:14:504:0:0:0,-4.21442,-10 0/0:99:37:37:1402:0:0:0,-10,-10 0/0:75.3943:9:9:338:0:0:0,-2.70927,-10 0/0:66.3634:6:6:213:0:0:0,-1.80618,-10 0/0:99:32:32:1204:0:0:0,-9.63296,-10 0/0:99:20:20:741:0:0:0,-6.0206,-10 0/0:63.3531:5:5:183:0:0:0,-1.50515,-10 0/0:99:31:31:1086:0:0:0,-9.33193,-10 0/0:99:20:20:725:0:0:0,-6.0206,-10 0/0:99:18:18:660:0:0:0,-5.41854,-10 0/0:99:20:20:725:0:0:0,-6.0206,-10 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:99:23:23:866:0:0:0,-6.92369,-10 0/0:99:22:22:786:0:0:0,-6.62266,-10 0/0:69.3737:7:7:266:0:0:0,-2.10721,-10 0/0:87.4355:13:13:492:0:0:0,-3.91339,-10 0/0:99:17:17:619:0:0:0,-5.11751,-10 0/0:63.3531:5:5:185:0:0:0,-1.50515,-10 0/0:84.4252:12:12:447:0:0:0,-3.61236,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:99:19:19:721:0:0:0,-5.71957,-10 0/0:99:20:20:752:0:0:0,-6.0206,-10 0/0:99:20:20:740:0:0:0,-6.0206,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 0/0:81.4149:11:11:417:0:0:0,-3.31133,-10 0/0:99:17:17:617:0:0:0,-5.11751,-10 0/0:78.4046:10:10:373:0:0:0,-3.0103,-10 0/0:63.3531:5:5:189:0:0:0,-1.50515,-10 0/0:99:23:23:833:0:0:0,-6.92369,-10 0/0:99:37:37:1369:0:0:0,-10,-10 0/0:99:17:17:618:0:0:0,-5.11751,-10 scaffold_56 3457324 . T TC 1598.98 . AB=0.496;ABP=3.02767;AC=4;AF=0.021978;AN=182;AO=62;CIGAR=1M1I1M1X;DP=1980;DPB=2006.33;DPRA=1.46563;EPP=3.15039;EPPR=3.01144;GTI=1;LEN=1;MEANALT=1.25;MQM=59.5806;MQMR=59.9502;NS=91;NUMALT=1;ODDS=3.51669;PAIRED=0;PAIREDR=0;PAO=5;PQA=166;PQR=166;PRO=5;QA=2207;QR=69887;RO=1907;RPP=137.642;RPPR=4144.01;RUN=1;SAF=30;SAP=3.15039;SAR=32;SRF=953;SRP=3.01144;SRR=954;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:72.7329:22:22:794:0:0:0,-6.62266,-10 0|0:24.5681:6:6:223:0:0:0,-1.80618,-10 0|0:99:40:40:1426:0:0:0,-10,-10 0|0:57.6814:18:17:634:0:0:0,-5.11751,-10 0|0:42.6299:12:12:441:0:0:0,-3.61236,-10 0|0:33.599:9:9:342:0:0:0,-2.70927,-10 0|0:99:46:46:1702:0:0:0,-10,-10 0|0:99:37:37:1356:0:0:0,-10,-10 0|0:42.6299:12:12:431:0:0:0,-3.61236,-10 0|0:24.5681:6:6:219:0:0:0,-1.80618,-10 0|1:0.0223545:8:0:0:8:291:-10,-2.40824,0 0|0:36.6093:10:10:370:0:0:0,-3.0103,-10 0|0:99:40:40:1497:0:0:0,-10,-10 0|0:99:46:46:1634:0:0:0,-10,-10 0|0:99:32:31:1105:0:0:0,-9.33193,-10 0|0:84.7739:26:26:969:0:0:0,-7.82678,-10 0|0:63.702:19:19:710:0:0:0,-5.71957,-10 0|0:27.5784:7:7:263:0:0:0,-2.10721,-10 0|0:42.6299:12:12:441:0:0:0,-3.61236,-10 0|0:99:43:42:1533:0:0:0,-10,-10 0|0:63.702:19:19:695:0:0:0,-5.71957,-10 0|1:99:38:22:829:16:596:-10,0,-10 0|0:21.5578:5:5:188:0:0:0,-1.50515,-10 0|0:84.7739:27:26:955:0:0:0,-7.82678,-10 0|0:66.7123:20:20:745:0:0:0,-6.0206,-10 0|0:99:38:38:1409:0:0:0,-10,-10 0|0:66.7123:20:20:748:0:0:0,-6.0206,-10 0|0:51.6608:15:15:542:0:0:0,-4.51545,-10 0|0:45.6402:13:13:455:0:0:0,-3.91339,-10 0|0:99:46:46:1684:0:0:0,-10,-10 0|0:27.5784:7:7:253:0:0:0,-2.10721,-10 0|0:27.5784:7:7:258:0:0:0,-2.10721,-10 0|0:54.6711:16:16:596:0:0:0,-4.81648,-10 0|0:60.6917:18:18:645:0:0:0,-5.41854,-10 0|0:72.7329:23:22:808:0:0:0,-6.62266,-10 0|0:45.6402:13:13:484:0:0:0,-3.91339,-10 0|0:60.6917:18:18:679:0:0:0,-5.41854,-10 0|0:99:31:31:1157:0:0:0,-9.33193,-10 0|0:48.6505:14:14:501:0:0:0,-4.21442,-10 0|0:42.6299:12:12:425:0:0:0,-3.61236,-10 0|0:84.7739:26:26:945:0:0:0,-7.82678,-10 0|0:66.7123:20:20:738:0:0:0,-6.0206,-10 0|0:69.7226:21:21:775:0:0:0,-6.32163,-10 0|0:99:36:36:1337:0:0:0,-10,-10 0|0:81.7638:25:25:916:0:0:0,-7.52575,-10 0|0:45.6402:14:13:472:0:0:0,-3.91339,-10 0|0:99:63:63:2356:0:0:0,-10,-10 0|0:72.7329:22:22:803:0:0:0,-6.62266,-10 0|0:66.7123:20:20:701:0:0:0,-6.0206,-10 0|0:99:47:47:1731:0:0:0,-10,-10 0|0:33.599:9:9:331:0:0:0,-2.70927,-10 0|0:99:44:44:1587:0:0:0,-10,-10 0|0:42.6299:12:12:449:0:0:0,-3.61236,-10 0|0:24.5681:6:6:225:0:0:0,-1.80618,-10 0|0:99:44:44:1611:0:0:0,-10,-10 0|0:63.702:19:19:691:0:0:0,-5.71957,-10 0|0:54.6711:16:16:605:0:0:0,-4.81648,-10 0|0:57.6814:17:17:621:0:0:0,-5.11751,-10 0|0:48.6505:14:14:519:0:0:0,-4.21442,-10 0|0:48.6505:14:14:510:0:0:0,-4.21442,-10 0|0:99:44:44:1563:0:0:0,-10,-10 0|0:66.7123:20:20:726:0:0:0,-6.0206,-10 0|1:99:47:23:866:22:742:-10,0,-10 0|0:54.6711:16:16:599:0:0:0,-4.81648,-10 0|0:48.6505:14:14:501:0:0:0,-4.21442,-10 0|0:99:35:35:1252:0:0:0,-10,-10 0|0:60.6917:18:18:666:0:0:0,-5.41854,-10 0|0:45.6402:14:13:480:0:0:0,-3.91339,-10 0|0:99:38:38:1379:0:0:0,-10,-10 0|0:33.599:9:9:312:0:0:0,-2.70927,-10 0|0:45.6402:13:13:460:0:0:0,-3.91339,-10 0|0:99:31:31:1144:0:0:0,-9.33193,-10 0|0:72.7329:23:22:822:0:0:0,-6.62266,-10 0|0:63.702:19:19:709:0:0:0,-5.71957,-10 0|0:93.8031:29:29:1065:0:0:0,-8.72987,-10 0|0:42.6299:12:12:427:0:0:0,-3.61236,-10 0|0:45.6402:13:13:467:0:0:0,-3.91339,-10 0|0:48.6505:14:14:520:0:0:0,-4.21442,-10 0|0:15.5372:3:3:109:0:0:0,-0.90309,-10 0|0:45.6402:13:13:493:0:0:0,-3.91339,-10 0|1:99:32:16:578:16:578:-10,0,-10 0|0:99:35:35:1285:0:0:0,-10,-10 0|0:87.7839:27:27:983:0:0:0,-8.12781,-10 0|0:51.6608:15:15:564:0:0:0,-4.51545,-10 0|0:57.6814:18:17:603:0:0:0,-5.11751,-10 0|0:36.6093:10:10:350:0:0:0,-3.0103,-10 .:.:.:.:.:.:.:. 0|0:48.6505:14:14:526:0:0:0,-4.21442,-10 0|0:30.5887:8:8:303:0:0:0,-2.40824,-10 0|0:45.6402:13:13:489:0:0:0,-3.91339,-10 0|0:72.7329:22:22:801:0:0:0,-6.62266,-10 0|0:69.7226:21:21:776:0:0:0,-6.32163,-10 scaffold_56 3457326 . A C 1598.98 . AB=0.496;ABP=3.02767;AC=4;AF=0.021978;AN=182;AO=62;CIGAR=1M1I1M1X;DP=1980;DPB=2006.33;DPRA=1.46563;EPP=3.15039;EPPR=3.01144;GTI=1;LEN=1;MEANALT=1.25;MQM=59.5806;MQMR=59.9502;NS=91;NUMALT=1;ODDS=3.51669;PAIRED=0;PAIREDR=0;PAO=5;PQA=166;PQR=166;PRO=5;QA=2207;QR=69887;RO=1907;RPP=137.642;RPPR=4144.01;RUN=1;SAF=30;SAP=3.15039;SAR=32;SRF=953;SRP=3.01144;SRR=954;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:72.7329:22:22:794:0:0:0,-6.62266,-10 0|0:24.5681:6:6:223:0:0:0,-1.80618,-10 0|0:99:40:40:1426:0:0:0,-10,-10 0|0:57.6814:18:17:634:0:0:0,-5.11751,-10 0|0:42.6299:12:12:441:0:0:0,-3.61236,-10 0|0:33.599:9:9:342:0:0:0,-2.70927,-10 0|0:99:46:46:1702:0:0:0,-10,-10 0|0:99:37:37:1356:0:0:0,-10,-10 0|0:42.6299:12:12:431:0:0:0,-3.61236,-10 0|0:24.5681:6:6:219:0:0:0,-1.80618,-10 0|1:0.0223545:8:0:0:8:291:-10,-2.40824,0 0|0:36.6093:10:10:370:0:0:0,-3.0103,-10 0|0:99:40:40:1497:0:0:0,-10,-10 0|0:99:46:46:1634:0:0:0,-10,-10 0|0:99:32:31:1105:0:0:0,-9.33193,-10 0|0:84.7739:26:26:969:0:0:0,-7.82678,-10 0|0:63.702:19:19:710:0:0:0,-5.71957,-10 0|0:27.5784:7:7:263:0:0:0,-2.10721,-10 0|0:42.6299:12:12:441:0:0:0,-3.61236,-10 0|0:99:43:42:1533:0:0:0,-10,-10 0|0:63.702:19:19:695:0:0:0,-5.71957,-10 0|1:99:38:22:829:16:596:-10,0,-10 0|0:21.5578:5:5:188:0:0:0,-1.50515,-10 0|0:84.7739:27:26:955:0:0:0,-7.82678,-10 0|0:66.7123:20:20:745:0:0:0,-6.0206,-10 0|0:99:38:38:1409:0:0:0,-10,-10 0|0:66.7123:20:20:748:0:0:0,-6.0206,-10 0|0:51.6608:15:15:542:0:0:0,-4.51545,-10 0|0:45.6402:13:13:455:0:0:0,-3.91339,-10 0|0:99:46:46:1684:0:0:0,-10,-10 0|0:27.5784:7:7:253:0:0:0,-2.10721,-10 0|0:27.5784:7:7:258:0:0:0,-2.10721,-10 0|0:54.6711:16:16:596:0:0:0,-4.81648,-10 0|0:60.6917:18:18:645:0:0:0,-5.41854,-10 0|0:72.7329:23:22:808:0:0:0,-6.62266,-10 0|0:45.6402:13:13:484:0:0:0,-3.91339,-10 0|0:60.6917:18:18:679:0:0:0,-5.41854,-10 0|0:99:31:31:1157:0:0:0,-9.33193,-10 0|0:48.6505:14:14:501:0:0:0,-4.21442,-10 0|0:42.6299:12:12:425:0:0:0,-3.61236,-10 0|0:84.7739:26:26:945:0:0:0,-7.82678,-10 0|0:66.7123:20:20:738:0:0:0,-6.0206,-10 0|0:69.7226:21:21:775:0:0:0,-6.32163,-10 0|0:99:36:36:1337:0:0:0,-10,-10 0|0:81.7638:25:25:916:0:0:0,-7.52575,-10 0|0:45.6402:14:13:472:0:0:0,-3.91339,-10 0|0:99:63:63:2356:0:0:0,-10,-10 0|0:72.7329:22:22:803:0:0:0,-6.62266,-10 0|0:66.7123:20:20:701:0:0:0,-6.0206,-10 0|0:99:47:47:1731:0:0:0,-10,-10 0|0:33.599:9:9:331:0:0:0,-2.70927,-10 0|0:99:44:44:1587:0:0:0,-10,-10 0|0:42.6299:12:12:449:0:0:0,-3.61236,-10 0|0:24.5681:6:6:225:0:0:0,-1.80618,-10 0|0:99:44:44:1611:0:0:0,-10,-10 0|0:63.702:19:19:691:0:0:0,-5.71957,-10 0|0:54.6711:16:16:605:0:0:0,-4.81648,-10 0|0:57.6814:17:17:621:0:0:0,-5.11751,-10 0|0:48.6505:14:14:519:0:0:0,-4.21442,-10 0|0:48.6505:14:14:510:0:0:0,-4.21442,-10 0|0:99:44:44:1563:0:0:0,-10,-10 0|0:66.7123:20:20:726:0:0:0,-6.0206,-10 0|1:99:47:23:866:22:742:-10,0,-10 0|0:54.6711:16:16:599:0:0:0,-4.81648,-10 0|0:48.6505:14:14:501:0:0:0,-4.21442,-10 0|0:99:35:35:1252:0:0:0,-10,-10 0|0:60.6917:18:18:666:0:0:0,-5.41854,-10 0|0:45.6402:14:13:480:0:0:0,-3.91339,-10 0|0:99:38:38:1379:0:0:0,-10,-10 0|0:33.599:9:9:312:0:0:0,-2.70927,-10 0|0:45.6402:13:13:460:0:0:0,-3.91339,-10 0|0:99:31:31:1144:0:0:0,-9.33193,-10 0|0:72.7329:23:22:822:0:0:0,-6.62266,-10 0|0:63.702:19:19:709:0:0:0,-5.71957,-10 0|0:93.8031:29:29:1065:0:0:0,-8.72987,-10 0|0:42.6299:12:12:427:0:0:0,-3.61236,-10 0|0:45.6402:13:13:467:0:0:0,-3.91339,-10 0|0:48.6505:14:14:520:0:0:0,-4.21442,-10 0|0:15.5372:3:3:109:0:0:0,-0.90309,-10 0|0:45.6402:13:13:493:0:0:0,-3.91339,-10 0|1:99:32:16:578:16:578:-10,0,-10 0|0:99:35:35:1285:0:0:0,-10,-10 0|0:87.7839:27:27:983:0:0:0,-8.12781,-10 0|0:51.6608:15:15:564:0:0:0,-4.51545,-10 0|0:57.6814:18:17:603:0:0:0,-5.11751,-10 0|0:36.6093:10:10:350:0:0:0,-3.0103,-10 .:.:.:.:.:.:.:. 0|0:48.6505:14:14:526:0:0:0,-4.21442,-10 0|0:30.5887:8:8:303:0:0:0,-2.40824,-10 0|0:45.6402:13:13:489:0:0:0,-3.91339,-10 0|0:72.7329:22:22:801:0:0:0,-6.62266,-10 0|0:69.7226:21:21:776:0:0:0,-6.32163,-10 scaffold_56 3499759 . T C 706.502 . AB=0.571429;ABP=5.49198;AC=3;AF=0.0163043;AN=184;AO=32;CIGAR=1X;DP=1232;DPB=1232;DPRA=1.4127;EPP=4.09604;EPPR=9.96625;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9575;NS=92;NUMALT=1;ODDS=2.95646;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1059;QR=43526;RO=1200;RPP=72.4974;RPPR=2565.53;RUN=1;SAF=14;SAP=4.09604;SAR=18;SRF=636;SRP=12.3911;SRR=564;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.5406:17:17:596:0:0:0,-5.11751,-10 0/0:34.4479:8:8:289:0:0:0,-2.40824,-10 0/0:49.4994:13:13:483:0:0:0,-3.91339,-10 0/0:25.417:5:5:165:0:0:0,-1.50515,-10 0/0:52.5097:14:14:506:0:0:0,-4.21442,-10 0/0:40.4685:10:10:359:0:0:0,-3.0103,-10 0/0:85.623:25:25:918:0:0:0,-7.52575,-10 0/0:88.6329:26:26:960:0:0:0,-7.82678,-10 0/0:61.5406:17:17:621:0:0:0,-5.11751,-10 0/0:19.3964:3:3:114:0:0:0,-0.90309,-10 0/0:40.4685:10:10:365:0:0:0,-3.0103,-10 0/0:25.417:5:5:157:0:0:0,-1.50515,-10 0/1:99:20:10:370:10:313:-10,0,-10 0/0:58.5303:16:16:561:0:0:0,-4.81648,-10 0/0:64.5509:18:18:618:0:0:0,-5.41854,-10 0/1:99:15:6:224:9:295:-10,0,-10 0/0:64.5509:18:18:651:0:0:0,-5.41854,-10 0/0:28.4273:6:6:228:0:0:0,-1.80618,-10 0/0:55.52:15:15:542:0:0:0,-4.51545,-10 0/0:85.623:25:25:886:0:0:0,-7.52575,-10 0/0:43.4788:11:11:389:0:0:0,-3.31133,-10 0/0:67.5612:19:19:693:0:0:0,-5.71957,-10 0/0:37.4582:9:9:339:0:0:0,-2.70927,-10 0/0:40.4685:10:10:355:0:0:0,-3.0103,-10 0/0:58.5303:16:16:599:0:0:0,-4.81648,-10 0/0:58.5303:16:16:560:0:0:0,-4.81648,-10 0/0:55.52:15:15:495:0:0:0,-4.51545,-10 0/0:28.4273:6:6:228:0:0:0,-1.80618,-10 0/0:49.4994:13:13:436:0:0:0,-3.91339,-10 0/0:70.5715:20:20:736:0:0:0,-6.0206,-10 0/0:25.417:5:5:190:0:0:0,-1.50515,-10 0/0:40.4685:10:10:374:0:0:0,-3.0103,-10 0/0:40.4685:10:10:374:0:0:0,-3.0103,-10 0/0:25.417:5:5:176:0:0:0,-1.50515,-10 0/0:46.4891:12:12:446:0:0:0,-3.61236,-10 0/0:25.417:5:5:189:0:0:0,-1.50515,-10 0/0:25.417:5:5:183:0:0:0,-1.50515,-10 0/0:64.5509:18:18:649:0:0:0,-5.41854,-10 0/0:55.52:15:15:559:0:0:0,-4.51545,-10 0/0:43.4788:11:11:413:0:0:0,-3.31133,-10 0/1:99:21:8:282:13:451:-10,0,-10 0/0:58.5303:16:16:589:0:0:0,-4.81648,-10 0/0:49.4994:13:13:465:0:0:0,-3.91339,-10 0/0:70.5715:20:20:742:0:0:0,-6.0206,-10 0/0:46.4891:12:12:428:0:0:0,-3.61236,-10 0/0:37.4582:9:9:313:0:0:0,-2.70927,-10 0/0:88.6329:26:26:947:0:0:0,-7.82678,-10 0/0:76.5921:22:22:835:0:0:0,-6.62266,-10 0/0:43.4788:11:11:366:0:0:0,-3.31133,-10 0/0:88.6329:26:26:920:0:0:0,-7.82678,-10 0/0:22.4067:4:4:150:0:0:0,-1.20412,-10 0/0:64.5509:18:18:648:0:0:0,-5.41854,-10 0/0:40.4685:10:10:380:0:0:0,-3.0103,-10 0/0:28.4273:6:6:190:0:0:0,-1.80618,-10 0/0:99:30:30:1100:0:0:0,-9.0309,-10 0/0:31.4376:7:7:266:0:0:0,-2.10721,-10 0/0:52.5097:14:14:486:0:0:0,-4.21442,-10 0/0:34.4479:8:8:280:0:0:0,-2.40824,-10 0/0:52.5097:14:14:524:0:0:0,-4.21442,-10 0/0:37.4582:9:9:332:0:0:0,-2.70927,-10 0/0:70.5715:20:20:741:0:0:0,-6.0206,-10 0/0:40.4685:10:10:339:0:0:0,-3.0103,-10 0/0:88.6329:26:26:908:0:0:0,-7.82678,-10 0/0:52.5097:14:14:505:0:0:0,-4.21442,-10 0/0:37.4582:9:9:328:0:0:0,-2.70927,-10 0/0:97.661:29:29:1025:0:0:0,-8.72987,-10 0/0:61.5406:17:17:625:0:0:0,-5.11751,-10 0/0:13.3758:1:1:33:0:0:0,-0.30103,-3.3 0/0:82.6126:24:24:900:0:0:0,-7.22472,-10 0/0:37.4582:9:9:339:0:0:0,-2.70927,-10 0/0:43.4788:11:11:390:0:0:0,-3.31133,-10 0/0:64.5509:18:18:661:0:0:0,-5.41854,-10 0/0:55.52:15:15:569:0:0:0,-4.51545,-10 0/0:40.4685:10:10:375:0:0:0,-3.0103,-10 0/0:49.4994:13:13:485:0:0:0,-3.91339,-10 0/0:40.4685:10:10:378:0:0:0,-3.0103,-10 0/0:34.4479:8:8:299:0:0:0,-2.40824,-10 0/0:25.417:5:5:186:0:0:0,-1.50515,-10 0/0:40.4685:10:10:348:0:0:0,-3.0103,-10 0/0:40.4685:10:10:374:0:0:0,-3.0103,-10 0/0:55.52:15:15:556:0:0:0,-4.51545,-10 0/0:70.5715:20:20:739:0:0:0,-6.0206,-10 0/0:58.5303:16:16:605:0:0:0,-4.81648,-10 0/0:55.52:15:15:551:0:0:0,-4.51545,-10 0/0:70.5715:20:20:723:0:0:0,-6.0206,-10 0/0:19.3964:3:3:88:0:0:0,-0.90309,-8.21333 0/0:49.4994:13:13:470:0:0:0,-3.91339,-10 0/0:43.4788:11:11:413:0:0:0,-3.31133,-10 0/0:19.3964:3:3:114:0:0:0,-0.90309,-10 0/0:58.5303:16:16:578:0:0:0,-4.81648,-10 0/0:46.4891:12:12:427:0:0:0,-3.61236,-10 0/0:28.4273:6:6:215:0:0:0,-1.80618,-10 scaffold_56 3593009 . G C 404.634 . AB=0.486486;ABP=3.06899;AC=1;AF=0.00543478;AN=184;AO=18;CIGAR=1X;DP=1749;DPB=1749;DPRA=1.96671;EPP=10.7311;EPPR=3.67391;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9775;NS=92;NUMALT=1;ODDS=3.60957;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=622;QR=63806;RO=1731;RPP=42.0968;RPPR=3675.47;RUN=1;SAF=13;SAP=10.7311;SAR=5;SRF=887;SRP=5.3298;SRR=844;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:67.0391:18:18:675:0:0:0,-5.41854,-10 0/0:36.9361:8:8:300:0:0:0,-2.40824,-10 0/0:79.0802:22:22:799:0:0:0,-6.62266,-10 0/0:61.0185:16:16:603:0:0:0,-4.81648,-10 0/0:61.0185:16:16:586:0:0:0,-4.81648,-10 0/0:30.9155:6:6:227:0:0:0,-1.80618,-10 0/0:99:33:33:1247:0:0:0,-9.93399,-10 0/0:76.0699:21:21:784:0:0:0,-6.32163,-10 0/0:54.9979:14:14:519:0:0:0,-4.21442,-10 0/0:21.8846:3:3:113:0:0:0,-0.90309,-10 0/0:51.9876:13:13:488:0:0:0,-3.91339,-10 0/0:30.9155:6:6:224:0:0:0,-1.80618,-10 0/1:99:37:19:709:18:622:-10,0,-10 0/0:99:39:39:1475:0:0:0,-10,-10 0/0:99:32:32:1196:0:0:0,-9.63296,-10 0/0:88.1108:25:25:904:0:0:0,-7.52575,-10 0/0:88.1108:25:25:918:0:0:0,-7.52575,-10 0/0:30.9155:6:6:226:0:0:0,-1.80618,-10 0/0:45.967:11:11:417:0:0:0,-3.31133,-10 0/0:99:40:40:1455:0:0:0,-10,-10 0/0:79.0802:22:22:815:0:0:0,-6.62266,-10 0/0:82.0905:23:23:848:0:0:0,-6.92369,-10 0/0:39.9464:9:9:295:0:0:0,-2.70927,-10 0/0:73.0597:20:20:734:0:0:0,-6.0206,-10 0/0:94.1303:27:27:1020:0:0:0,-8.12781,-10 0/0:70.0494:19:19:719:0:0:0,-5.71957,-10 0/0:51.9876:13:13:470:0:0:0,-3.91339,-10 0/0:88.1108:25:25:916:0:0:0,-7.52575,-10 0/0:88.1108:25:25:919:0:0:0,-7.52575,-10 0/0:99:40:40:1490:0:0:0,-10,-10 0/0:36.9361:8:8:279:0:0:0,-2.40824,-10 0/0:33.9258:7:7:264:0:0:0,-2.10721,-10 0/0:70.0494:19:19:706:0:0:0,-5.71957,-10 0/0:54.9979:14:14:530:0:0:0,-4.21442,-10 0/0:67.0391:18:18:649:0:0:0,-5.41854,-10 0/0:33.9258:7:7:266:0:0:0,-2.10721,-10 0/0:33.9258:7:7:266:0:0:0,-2.10721,-10 0/0:91.1207:26:26:975:0:0:0,-7.82678,-10 0/0:70.0494:19:19:676:0:0:0,-5.71957,-10 0/0:45.967:11:11:418:0:0:0,-3.31133,-10 0/0:85.1007:24:24:910:0:0:0,-7.22472,-10 0/0:85.1007:24:24:865:0:0:0,-7.22472,-10 0/0:64.0288:17:17:627:0:0:0,-5.11751,-10 0/0:88.1108:25:25:861:0:0:0,-7.52575,-10 0/0:91.1207:26:26:937:0:0:0,-7.82678,-10 0/0:67.0391:18:18:608:0:0:0,-5.41854,-10 0/0:99:45:45:1682:0:0:0,-10,-10 0/0:88.1108:25:25:929:0:0:0,-7.52575,-10 0/0:42.9567:10:10:378:0:0:0,-3.0103,-10 0/0:99:35:35:1276:0:0:0,-10,-10 0/0:51.9876:13:13:481:0:0:0,-3.91339,-10 0/0:91.1207:26:26:987:0:0:0,-7.82678,-10 0/0:67.0391:18:18:668:0:0:0,-5.41854,-10 0/0:36.9361:8:8:301:0:0:0,-2.40824,-10 0/0:99:42:42:1535:0:0:0,-10,-10 0/0:67.0391:18:18:682:0:0:0,-5.41854,-10 0/0:70.0494:19:19:671:0:0:0,-5.71957,-10 0/0:36.9361:8:8:281:0:0:0,-2.40824,-10 0/0:85.1007:24:24:840:0:0:0,-7.22472,-10 0/0:42.9567:10:10:380:0:0:0,-3.0103,-10 0/0:94.1303:27:27:1000:0:0:0,-8.12781,-10 0/0:70.0494:19:19:676:0:0:0,-5.71957,-10 0/0:99:41:41:1534:0:0:0,-10,-10 0/0:51.9876:13:13:487:0:0:0,-3.91339,-10 0/0:36.9361:8:8:295:0:0:0,-2.40824,-10 0/0:94.1303:27:27:1004:0:0:0,-8.12781,-10 0/0:73.0597:20:20:737:0:0:0,-6.0206,-10 0/0:30.9155:6:6:228:0:0:0,-1.80618,-10 0/0:99:33:33:1246:0:0:0,-9.93399,-10 0/0:30.9155:6:6:228:0:0:0,-1.80618,-10 0/0:79.0802:22:22:800:0:0:0,-6.62266,-10 0/0:97.1391:28:28:1032:0:0:0,-8.42884,-10 0/0:94.1303:27:27:974:0:0:0,-8.12781,-10 0/0:79.0802:22:22:786:0:0:0,-6.62266,-10 0/0:94.1303:27:27:1015:0:0:0,-8.12781,-10 0/0:33.9258:7:7:262:0:0:0,-2.10721,-10 0/0:42.9567:10:10:335:0:0:0,-3.0103,-10 0/0:33.9258:7:7:261:0:0:0,-2.10721,-10 0/0:27.9052:5:5:188:0:0:0,-1.50515,-10 0/0:33.9258:7:7:266:0:0:0,-2.10721,-10 0/0:91.1207:26:26:937:0:0:0,-7.82678,-10 0/0:97.1391:28:28:1054:0:0:0,-8.42884,-10 0/0:82.0905:23:23:842:0:0:0,-6.92369,-10 0/0:76.0699:21:21:775:0:0:0,-6.32163,-10 0/0:79.0802:22:22:767:0:0:0,-6.62266,-10 0/0:15.864:1:1:38:0:0:0,-0.30103,-3.8 0/0:88.1108:25:25:936:0:0:0,-7.52575,-10 0/0:54.9979:14:14:532:0:0:0,-4.21442,-10 0/0:33.9258:7:7:265:0:0:0,-2.10721,-10 0/0:48.9773:12:12:452:0:0:0,-3.61236,-10 0/0:51.9876:13:13:484:0:0:0,-3.91339,-10 0/0:42.9567:10:10:351:0:0:0,-3.0103,-10 scaffold_56 3738726 . A G 119.895 . AB=0.388889;ABP=4.9405;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1205;DPB=1205;DPRA=1.10969;EPP=20.3821;EPPR=1919.59;GTI=1;LEN=1;MEANALT=1;MQM=21;MQMR=47.8569;NS=92;NUMALT=1;ODDS=5.66904;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=41673;RO=1195;RPP=20.3821;RPPR=2311;RUN=1;SAF=8;SAP=20.3821;SAR=0;SRF=1101;SRP=1845.67;SRR=94;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.1374:9:9:331:0:0:0,-2.70927,-10 0/0:42.0756:3:3:110:0:0:0,-0.90309,-10 0/1:99:18:11:399:7:266:-10,0,-10 0/0:60.1374:9:9:309:0:0:0,-2.70927,-10 0/0:57.1271:8:8:293:0:0:0,-2.40824,-10 0/0:51.1065:6:6:223:0:0:0,-1.80618,-10 0/0:99:28:28:949:0:0:0,-8.42884,-10 0/0:72.1786:14:13:419:0:0:0,-3.91339,-10 0/0:60.1374:9:9:292:0:0:0,-2.70927,-10 0/0:36.055:1:1:38:0:0:0,-0.30103,-3.8 0/0:54.1168:7:7:257:0:0:0,-2.10721,-10 0/0:57.1271:8:8:288:0:0:0,-2.40824,-10 0/0:78.1991:15:15:495:0:0:0,-4.51545,-10 0/0:60.1374:9:9:337:0:0:0,-2.70927,-10 0/0:99:29:29:971:0:0:0,-8.72987,-10 0/0:99:22:22:775:0:0:0,-6.62266,-10 0/0:81.2095:16:16:578:0:0:0,-4.81648,-10 0/0:48.0962:5:5:183:0:0:0,-1.50515,-10 0/0:72.1786:13:13:424:0:0:0,-3.91339,-10 0/0:99:25:25:843:0:0:0,-7.52575,-10 0/0:81.2095:16:16:558:0:0:0,-4.81648,-10 0/0:69.1683:12:12:430:0:0:0,-3.61236,-10 0/0:45.0859:4:4:150:0:0:0,-1.20412,-10 0/0:69.1683:12:12:397:0:0:0,-3.61236,-10 0/0:87.2297:18:18:622:0:0:0,-5.41854,-10 0/0:81.2095:16:16:557:0:0:0,-4.81648,-10 0/0:87.2297:18:18:648:0:0:0,-5.41854,-10 0/0:63.1477:10:10:347:0:0:0,-3.0103,-10 0/0:75.1889:14:14:499:0:0:0,-4.21442,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:45.0859:4:4:145:0:0:0,-1.20412,-10 0/0:51.1065:6:6:224:0:0:0,-1.80618,-10 0/0:72.1786:13:13:479:0:0:0,-3.91339,-10 0/0:51.1065:6:6:195:0:0:0,-1.80618,-10 0/0:72.1786:13:13:472:0:0:0,-3.91339,-10 0/0:36.055:1:1:35:0:0:0,-0.30103,-3.5 0/0:60.1374:9:9:322:0:0:0,-2.70927,-10 0/0:93.2491:20:20:704:0:0:0,-6.0206,-10 0/0:81.2095:16:16:571:0:0:0,-4.81648,-10 0/0:42.0756:3:3:107:0:0:0,-0.90309,-9.98667 0/0:96.2578:21:21:770:0:0:0,-6.32163,-10 0/0:75.1889:14:14:457:0:0:0,-4.21442,-10 0/0:66.158:11:11:369:0:0:0,-3.31133,-10 0/0:99:23:23:757:0:0:0,-6.92369,-10 0/0:78.1991:15:15:484:0:0:0,-4.51545,-10 0/0:75.1889:14:14:460:0:0:0,-4.21442,-10 0/0:99:41:41:1456:0:0:0,-10,-10 0/0:96.2578:21:21:751:0:0:0,-6.32163,-10 0/0:66.158:11:11:355:0:0:0,-3.31133,-10 0/0:96.2578:22:21:716:0:0:0,-6.32163,-10 0/0:51.1065:6:6:222:0:0:0,-1.80618,-10 0/0:90.2396:19:19:669:0:0:0,-5.71957,-10 0/0:54.1168:7:7:236:0:0:0,-2.10721,-10 0/0:39.0653:2:2:71:0:0:0,-0.60206,-6.745 0/0:96.2578:21:21:731:0:0:0,-6.32163,-10 0/0:69.1683:12:12:436:0:0:0,-3.61236,-10 0/0:72.1786:13:13:457:0:0:0,-3.91339,-10 0/0:54.1168:7:7:261:0:0:0,-2.10721,-10 0/0:78.1991:15:15:519:0:0:0,-4.51545,-10 0/0:57.1271:8:8:277:0:0:0,-2.40824,-10 0/0:63.1477:10:10:365:0:0:0,-3.0103,-10 0/0:87.2297:18:18:645:0:0:0,-5.41854,-10 0/0:99:26:26:911:0:0:0,-7.82678,-10 0/0:99:25:25:891:0:0:0,-7.52575,-10 0/0:54.1168:7:7:241:0:0:0,-2.10721,-10 0/0:99:26:26:846:0:0:0,-7.82678,-10 0/0:60.1374:9:9:338:0:0:0,-2.70927,-10 0/0:63.1477:10:10:375:0:0:0,-3.0103,-10 0/0:99:27:27:983:0:0:0,-8.12781,-10 0/0:66.158:11:11:368:0:0:0,-3.31133,-10 0/0:75.1889:14:14:468:0:0:0,-4.21442,-10 0/0:78.1991:15:15:476:0:0:0,-4.51545,-10 0/0:90.2396:19:19:660:0:0:0,-5.71957,-10 0/0:72.1786:13:13:407:0:0:0,-3.91339,-10 0/0:78.1991:15:15:518:0:0:0,-4.51545,-10 0/0:45.0859:4:4:149:0:0:0,-1.20412,-10 0/0:57.1271:8:8:289:0:0:0,-2.40824,-10 0/0:57.1271:8:8:289:0:0:0,-2.40824,-10 0/0:39.0653:2:2:71:0:0:0,-0.60206,-6.745 0/0:63.1477:10:10:371:0:0:0,-3.0103,-10 0/0:87.2297:18:18:628:0:0:0,-5.41854,-10 0/0:84.2198:17:17:584:0:0:0,-5.11751,-10 0/0:99:23:23:857:0:0:0,-6.92369,-10 0/0:72.1786:13:13:389:0:0:0,-3.91339,-10 0/0:66.158:11:11:397:0:0:0,-3.31133,-10 0/0:39.0653:2:2:75:0:0:0,-0.60206,-7.125 0/0:51.1065:6:6:215:0:0:0,-1.80618,-10 0/0:39.0653:2:2:76:0:0:0,-0.60206,-7.22 0/0:45.0859:4:4:149:0:0:0,-1.20412,-10 0/0:0.0149425:11:10:338:1:38:-1.53006,0,-10 0/0:78.1991:15:15:534:0:0:0,-4.51545,-10 0/0:63.1477:10:10:316:0:0:0,-3.0103,-10 scaffold_56 3802322 . T C 2809.56 . AB=0.537313;ABP=5.44105;AC=11;AF=0.0597826;AN=184;AO=108;CIGAR=1X;DP=1409;DPB=1409;DPRA=1.22524;EPP=21.1059;EPPR=9.22094;GTI=2;LEN=1;MEANALT=1;MQM=59.9259;MQMR=59.9055;NS=92;NUMALT=1;ODDS=1.32994;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3937;QR=47469;RO=1301;RPP=237.529;RPPR=2828.1;RUN=1;SAF=39;SAP=21.1059;SAR=69;SRF=620;SRP=9.22094;SRR=681;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.0405:12:12:423:0:0:0,-3.61236,-10 0/0:17.9478:3:3:114:0:0:0,-0.90309,-10 0/1:99:13:3:113:10:376:-10,0,-9.08964 0/0:32.9993:8:8:293:0:0:0,-2.40824,-10 0/0:17.9478:3:3:114:0:0:0,-0.90309,-10 0/0:32.9993:8:8:302:0:0:0,-2.40824,-10 0/0:96.2111:29:29:1070:0:0:0,-8.72987,-10 0/0:42.0302:11:11:405:0:0:0,-3.31133,-10 0/0:48.0508:13:13:467:0:0:0,-3.91339,-10 0/0:20.9581:4:4:149:0:0:0,-1.20412,-10 0/1:0.00321337:5:0:0:5:190:-10,-1.50515,0 0/0:23.9684:5:5:135:0:0:0,-1.50515,-10 0/0:72.1332:21:21:757:0:0:0,-6.32163,-10 0/0:81.164:24:24:875:0:0:0,-7.22472,-10 0/0:84.1744:25:25:915:0:0:0,-7.52575,-10 0/0:51.0611:14:14:525:0:0:0,-4.21442,-10 0/0:78.1538:23:23:872:0:0:0,-6.92369,-10 0/0:36.0096:9:9:342:0:0:0,-2.70927,-10 0/0:45.0405:12:12:428:0:0:0,-3.61236,-10 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/1:99:14:7:262:7:237:-10,0,-10 0/1:99:25:13:478:12:445:-10,0,-10 0/0:32.9993:8:8:287:0:0:0,-2.40824,-10 0/1:99:19:10:369:9:337:-10,0,-10 0/0:42.0302:11:11:416:0:0:0,-3.31133,-10 0/0:66.1126:19:19:663:0:0:0,-5.71957,-10 0/0:63.1023:18:18:669:0:0:0,-5.41854,-10 0/0:57.0817:16:16:597:0:0:0,-4.81648,-10 0/0:51.0611:14:14:522:0:0:0,-4.21442,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:17.9478:3:3:114:0:0:0,-0.90309,-10 0/0:32.9993:8:8:296:0:0:0,-2.40824,-10 0/0:60.092:17:17:576:0:0:0,-5.11751,-10 0/0:54.0714:15:15:564:0:0:0,-4.51545,-10 0/0:48.0508:13:13:460:0:0:0,-3.91339,-10 0/0:26.9787:6:6:223:0:0:0,-1.80618,-10 0/0:45.0405:12:12:440:0:0:0,-3.61236,-10 0/0:90.1949:27:27:961:0:0:0,-8.12781,-10 0/0:48.0508:13:13:488:0:0:0,-3.91339,-10 0/0:36.0096:9:9:339:0:0:0,-2.70927,-10 0/0:90.1949:27:27:960:0:0:0,-8.12781,-10 0/0:32.9993:8:8:300:0:0:0,-2.40824,-10 0/0:51.0611:14:14:519:0:0:0,-4.21442,-10 0/0:63.1023:18:18:673:0:0:0,-5.41854,-10 0/0:39.0199:10:10:378:0:0:0,-3.0103,-10 0/0:51.0611:14:14:504:0:0:0,-4.21442,-10 0/0:99:38:38:1369:0:0:0,-10,-10 0/1:99:24:13:490:11:384:-10,0,-10 0/0:36.0096:9:9:315:0:0:0,-2.70927,-10 0/0:96.2111:29:29:1065:0:0:0,-8.72987,-10 0/0:51.0611:14:14:505:0:0:0,-4.21442,-10 0/0:99:30:30:1078:0:0:0,-9.0309,-10 0/0:45.0405:12:12:456:0:0:0,-3.61236,-10 0/0:26.9787:6:6:220:0:0:0,-1.80618,-10 0/0:87.1847:26:26:940:0:0:0,-7.82678,-10 0/0:48.0508:13:13:490:0:0:0,-3.91339,-10 0/1:99:25:14:489:11:409:-10,0,-10 0/0:20.9581:4:4:125:0:0:0,-1.20412,-10 0/0:39.0199:10:10:377:0:0:0,-3.0103,-10 0/0:48.0508:13:13:487:0:0:0,-3.91339,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:51.0611:14:14:526:0:0:0,-4.21442,-10 0/0:72.1332:21:21:762:0:0:0,-6.32163,-10 0/0:42.0302:11:11:396:0:0:0,-3.31133,-10 0/0:29.989:7:7:256:0:0:0,-2.10721,-10 0/1:99:30:15:547:15:558:-10,0,-10 0/0:39.0199:10:10:357:0:0:0,-3.0103,-10 0/0:39.0199:10:10:380:0:0:0,-3.0103,-10 0/0:78.1538:23:23:785:0:0:0,-6.92369,-10 0/0:32.9993:8:8:301:0:0:0,-2.40824,-10 0/0:66.1126:19:19:718:0:0:0,-5.71957,-10 0/0:96.2111:29:29:1068:0:0:0,-8.72987,-10 0/0:57.0817:16:16:588:0:0:0,-4.81648,-10 0/0:32.9993:8:8:304:0:0:0,-2.40824,-10 0/0:96.2111:29:29:1041:0:0:0,-8.72987,-10 0/0:29.989:7:7:264:0:0:0,-2.10721,-10 0/1:0.911644:13:0:0:13:469:-10,-3.91339,0 0/0:26.9787:6:6:222:0:0:0,-1.80618,-10 0/0:36.0096:9:9:338:0:0:0,-2.70927,-10 0/0:42.0302:11:11:414:0:0:0,-3.31133,-10 0/0:66.1126:19:19:698:0:0:0,-5.71957,-10 0/1:99:22:11:417:11:413:-10,0,-10 0/1:78.3764:11:7:264:4:119:-10,0,-10 0/0:63.1023:18:18:603:0:0:0,-5.41854,-10 0/0:90.1949:27:27:940:0:0:0,-8.12781,-10 0/0:20.9581:4:4:141:0:0:0,-1.20412,-10 0/0:36.0096:9:9:339:0:0:0,-2.70927,-10 0/0:57.0817:16:16:604:0:0:0,-4.81648,-10 0/0:23.9684:5:5:168:0:0:0,-1.50515,-10 0/0:81.164:24:24:879:0:0:0,-7.22472,-10 0/0:54.0714:15:15:524:0:0:0,-4.51545,-10 0/0:45.0405:12:12:449:0:0:0,-3.61236,-10 scaffold_56 3840806 . G C 8592.17 . AB=0.515909;ABP=3.97759;AC=20;AF=0.108696;AN=184;AO=308;CIGAR=1X;DP=2617;DPB=2617;DPRA=1.14969;EPP=10.2297;EPPR=3.01124;GTI=0;LEN=1;MEANALT=1;MQM=59.9156;MQMR=59.9744;NS=92;NUMALT=1;ODDS=1.64893;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11234;QR=84262;RO=2303;RPP=671.824;RPPR=5003.91;RUN=1;SAF=138;SAP=10.2297;SAR=170;SRF=1151;SRP=3.01124;SRR=1152;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:88.2728:27:27:1015:0:0:0,-8.12781,-10 0/0:58.1705:17:17:643:0:0:0,-5.11751,-10 0/0:91.2838:28:28:1049:0:0:0,-8.42884,-10 0/0:58.1705:18:17:644:0:0:0,-5.11751,-10 0/0:73.2219:22:22:788:0:0:0,-6.62266,-10 0/0:34.0881:9:9:307:0:0:0,-2.70927,-10 0/1:99:42:22:804:20:708:-10,0,-10 0/0:99:40:40:1479:0:0:0,-10,-10 0/0:52.1499:15:15:570:0:0:0,-4.51545,-10 0/0:31.0778:8:8:259:0:0:0,-2.40824,-10 0/0:28.0675:7:7:265:0:0:0,-2.10721,-10 0/0:37.0984:10:10:336:0:0:0,-3.0103,-10 0/0:99:51:51:1883:0:0:0,-10,-10 0/1:99:50:28:978:22:810:-10,0,-10 0/0:99:35:35:1307:0:0:0,-10,-10 0/0:99:42:42:1495:0:0:0,-10,-10 0/1:99:37:16:602:21:762:-10,0,-10 0/0:49.1396:14:14:532:0:0:0,-4.21442,-10 0/0:82.2527:25:25:937:0:0:0,-7.52575,-10 0/1:99:48:20:726:28:1002:-10,0,-10 0/1:99:20:13:464:7:257:-10,0,-10 1/1:98.4697:38:0:0:38:1422:-10,-10,0 0/0:58.1705:17:17:638:0:0:0,-5.11751,-10 0/1:99:33:18:670:15:526:-10,0,-10 0/0:99:34:34:1199:0:0:0,-10,-10 0/0:99:50:50:1832:0:0:0,-10,-10 0/0:94.2915:29:29:1066:0:0:0,-8.72987,-10 0/0:73.2219:22:22:825:0:0:0,-6.62266,-10 0/0:99:37:37:1352:0:0:0,-10,-10 0/0:99:46:46:1688:0:0:0,-10,-10 1/1:14.1811:10:0:0:10:366:-10,-3.0103,0 0/0:37.0984:10:10:375:0:0:0,-3.0103,-10 0/0:82.2527:25:25:924:0:0:0,-7.52575,-10 0/0:43.119:12:12:454:0:0:0,-3.61236,-10 1/1:56.3253:24:0:0:24:842:-10,-7.22472,0 0/0:43.119:12:12:437:0:0:0,-3.61236,-10 0/0:40.1087:11:11:414:0:0:0,-3.31133,-10 0/1:99:45:24:870:21:772:-10,0,-10 0/0:79.2425:24:24:882:0:0:0,-7.22472,-10 0/1:99:30:11:417:19:711:-10,0,-10 0/0:99:53:52:1923:0:0:0,-10,-10 0/0:94.2915:29:29:1094:0:0:0,-8.72987,-10 0/0:88.2728:27:27:1013:0:0:0,-8.12781,-10 0/0:99:41:41:1493:0:0:0,-10,-10 0/0:88.2728:27:27:997:0:0:0,-8.12781,-10 0/0:79.2425:25:24:910:0:0:0,-7.22472,-10 0/0:99:70:69:2531:0:0:0,-10,-10 0/1:99:34:11:404:23:860:-10,0,-10 0/0:46.1293:13:13:468:0:0:0,-3.91339,-10 0/0:99:64:64:2385:0:0:0,-10,-10 0/0:58.1705:17:17:627:0:0:0,-5.11751,-10 0/1:99:47:25:881:22:783:-10,0,-10 0/0:43.119:12:12:452:0:0:0,-3.61236,-10 0/0:61.1808:18:18:654:0:0:0,-5.41854,-10 0/0:99:66:66:2411:0:0:0,-10,-10 0/0:55.1602:16:16:573:0:0:0,-4.81648,-10 0/1:99:30:16:605:14:525:-10,0,-10 1/1:8.16051:8:0:0:8:293:-10,-2.40824,0 0/0:82.2527:25:25:938:0:0:0,-7.52575,-10 0/0:64.1911:19:19:719:0:0:0,-5.71957,-10 0/0:99:38:37:1354:0:0:0,-10,-10 0/0:99:37:37:1361:0:0:0,-10,-10 0/0:99:61:61:2232:0:0:0,-10,-10 0/0:85.2628:26:26:945:0:0:0,-7.82678,-10 0/0:49.1396:14:14:532:0:0:0,-4.21442,-10 0/0:99:47:47:1660:0:0:0,-10,-10 0/0:85.2628:26:26:949:0:0:0,-7.82678,-10 0/0:43.119:12:12:438:0:0:0,-3.61236,-10 0/0:99:43:43:1507:0:0:0,-10,-10 0/0:64.1911:19:19:714:0:0:0,-5.71957,-10 0/0:88.2728:27:27:1000:0:0:0,-8.12781,-10 0/0:99:40:40:1454:0:0:0,-10,-10 0/0:99:33:33:1214:0:0:0,-9.93399,-10 0/0:94.2915:29:29:1038:0:0:0,-8.72987,-10 0/0:99:49:49:1788:0:0:0,-10,-10 0/0:85.2628:26:26:934:0:0:0,-7.82678,-10 0/0:99:31:31:1031:0:0:0,-9.33193,-10 0/0:49.1396:14:14:501:0:0:0,-4.21442,-10 0/0:25.0572:6:6:204:0:0:0,-1.80618,-10 0/0:49.1396:14:14:510:0:0:0,-4.21442,-10 0/0:99:49:48:1724:0:0:0,-10,-10 0/0:99:45:45:1612:0:0:0,-10,-10 0/0:99:34:34:1272:0:0:0,-10,-10 0/0:91.2838:28:28:1051:0:0:0,-8.42884,-10 0/0:88.2728:27:27:997:0:0:0,-8.12781,-10 0/0:37.0984:10:10:366:0:0:0,-3.0103,-10 0/0:55.1602:16:16:584:0:0:0,-4.81648,-10 0/0:76.2322:23:23:803:0:0:0,-6.92369,-10 0/0:37.0984:10:10:368:0:0:0,-3.0103,-10 0/1:99:24:9:295:15:557:-10,0,-10 0/0:21.1904:21:20:757:1:38:0,-1.19941,-10 0/0:76.2322:23:23:863:0:0:0,-6.92369,-10 scaffold_56 3882916 . G C 881.686 . AB=0.614035;ABP=9.44853;AC=3;AF=0.0163043;AN=184;AO=36;CIGAR=1X;DP=1341;DPB=1341;DPRA=1.32174;EPP=3.25157;EPPR=11.3983;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9931;NS=92;NUMALT=1;ODDS=2.67513;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1304;QR=47696;RO=1305;RPP=81.1833;RPPR=2508.16;RUN=1;SAF=19;SAP=3.25157;SAR=17;SRF=655;SRP=3.0519;SRR=650;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.2551:13:13:458:0:0:0,-3.91339,-10 0/0:48.2551:13:13:480:0:0:0,-3.91339,-10 0/0:57.286:16:16:596:0:0:0,-4.81648,-10 0/0:30.1933:7:7:266:0:0:0,-2.10721,-10 0/0:19.9256:19:18:681:1:38:0,-0.640816,-10 0/0:57.286:16:16:589:0:0:0,-4.81648,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:57.286:16:16:570:0:0:0,-4.81648,-10 0/0:42.2345:11:11:410:0:0:0,-3.31133,-10 0/0:24.1727:5:5:190:0:0:0,-1.50515,-10 0/0:33.2036:8:8:304:0:0:0,-2.40824,-10 0/0:21.1624:4:4:141:0:0:0,-1.20412,-10 0/0:66.3169:19:19:693:0:0:0,-5.71957,-10 0/0:72.3375:21:21:789:0:0:0,-6.32163,-10 0/0:84.3785:25:25:936:0:0:0,-7.52575,-10 0/0:81.3683:24:24:879:0:0:0,-7.22472,-10 0/0:75.3477:22:22:802:0:0:0,-6.62266,-10 0/0:42.2345:11:11:392:0:0:0,-3.31133,-10 0/0:39.2242:10:10:380:0:0:0,-3.0103,-10 0/0:93.4097:28:28:990:0:0:0,-8.42884,-10 0/0:36.2139:9:9:329:0:0:0,-2.70927,-10 0/0:69.3272:20:20:738:0:0:0,-6.0206,-10 0/0:30.1933:7:7:242:0:0:0,-2.10721,-10 0/0:57.286:16:16:608:0:0:0,-4.81648,-10 0/0:54.2757:15:15:562:0:0:0,-4.51545,-10 0/0:63.3066:18:18:656:0:0:0,-5.41854,-10 0/0:78.358:23:23:810:0:0:0,-6.92369,-10 0/0:27.183:6:6:228:0:0:0,-1.80618,-10 0/0:33.2036:8:8:304:0:0:0,-2.40824,-10 0/0:78.358:23:23:837:0:0:0,-6.92369,-10 0/0:24.1727:5:5:161:0:0:0,-1.50515,-10 0/0:30.1933:7:7:262:0:0:0,-2.10721,-10 0/0:45.2448:12:12:447:0:0:0,-3.61236,-10 0/0:21.1624:4:4:146:0:0:0,-1.20412,-10 0/0:63.3066:18:18:661:0:0:0,-5.41854,-10 0/0:30.1933:7:7:264:0:0:0,-2.10721,-10 0/0:36.2139:9:9:316:0:0:0,-2.70927,-10 0/0:69.3272:20:20:750:0:0:0,-6.0206,-10 0/0:54.2757:15:15:550:0:0:0,-4.51545,-10 0/0:51.2654:14:14:532:0:0:0,-4.21442,-10 0/0:69.3272:20:20:739:0:0:0,-6.0206,-10 0/0:39.2242:10:10:362:0:0:0,-3.0103,-10 0/0:36.2139:9:9:321:0:0:0,-2.70927,-10 0/0:75.3477:22:22:798:0:0:0,-6.62266,-10 0/0:54.2757:15:15:519:0:0:0,-4.51545,-10 0/0:39.2242:10:10:366:0:0:0,-3.0103,-10 0/0:78.358:23:23:861:0:0:0,-6.92369,-10 0/0:78.358:23:23:847:0:0:0,-6.92369,-10 0/0:51.2654:14:14:507:0:0:0,-4.21442,-10 0/0:57.286:16:16:545:0:0:0,-4.81648,-10 0/0:36.2139:9:9:328:0:0:0,-2.70927,-10 0/0:75.3477:22:22:818:0:0:0,-6.62266,-10 0/0:45.2448:12:12:456:0:0:0,-3.61236,-10 0/0:27.183:6:6:216:0:0:0,-1.80618,-10 0/0:99:33:33:1243:0:0:0,-9.93399,-10 0/0:30.1933:7:7:238:0:0:0,-2.10721,-10 0/0:69.3272:20:20:747:0:0:0,-6.0206,-10 0/0:60.2963:17:17:632:0:0:0,-5.11751,-10 0/0:39.2242:10:10:375:0:0:0,-3.0103,-10 0/0:42.2345:11:11:374:0:0:0,-3.31133,-10 0/0:78.358:23:23:847:0:0:0,-6.92369,-10 0/0:33.2036:8:8:303:0:0:0,-2.40824,-10 0/0:69.3272:20:20:684:0:0:0,-6.0206,-10 0/0:57.286:16:16:597:0:0:0,-4.81648,-10 0/0:39.2242:10:10:327:0:0:0,-3.0103,-10 0/0:45.2448:12:12:420:0:0:0,-3.61236,-10 0/0:54.2757:15:15:544:0:0:0,-4.51545,-10 0/0:42.2345:11:11:417:0:0:0,-3.31133,-10 0/0:99:34:34:1183:0:0:0,-10,-10 0/0:33.2036:8:8:279:0:0:0,-2.40824,-10 0/0:45.2448:12:12:403:0:0:0,-3.61236,-10 0/1:99:21:8:291:13:481:-10,0,-10 0/1:99:14:6:228:8:281:-10,0,-10 0/0:27.183:6:6:226:0:0:0,-1.80618,-10 0/1:99:22:8:285:14:504:-10,0,-10 0/0:45.2448:12:12:449:0:0:0,-3.61236,-10 0/0:33.2036:8:8:304:0:0:0,-2.40824,-10 0/0:36.2139:9:9:315:0:0:0,-2.70927,-10 0/0:12.1315:1:1:36:0:0:0,-0.30103,-3.6 0/0:30.1933:7:7:266:0:0:0,-2.10721,-10 0/0:81.3683:24:24:855:0:0:0,-7.22472,-10 0/0:75.3477:22:22:824:0:0:0,-6.62266,-10 0/0:45.2448:12:12:449:0:0:0,-3.61236,-10 0/0:54.2757:15:15:532:0:0:0,-4.51545,-10 0/0:63.3066:18:18:660:0:0:0,-5.41854,-10 0/0:48.2551:13:13:478:0:0:0,-3.91339,-10 0/0:75.3477:22:22:830:0:0:0,-6.62266,-10 0/0:45.2448:12:12:453:0:0:0,-3.61236,-10 0/0:30.1933:7:7:262:0:0:0,-2.10721,-10 0/0:57.286:16:16:597:0:0:0,-4.81648,-10 0/0:51.2654:14:14:501:0:0:0,-4.21442,-10 0/0:51.2654:14:14:508:0:0:0,-4.21442,-10 scaffold_56 3891292 . C T 2885.62 . AB=0.571429;ABP=7.35324;AC=8;AF=0.0434783;AN=184;AO=107;CIGAR=1X;DP=2372;DPB=2372;DPRA=0.931522;EPP=3.03059;EPPR=9.93696;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9801;NS=92;NUMALT=1;ODDS=5.03445;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3982;QR=83176;RO=2265;RPP=235.358;RPPR=4860.78;RUN=1;SAF=54;SAP=3.03059;SAR=53;SRF=1089;SRP=10.2668;SRR=1176;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.8611:12:12:427:0:0:0,-3.61236,-10 0/0:48.8714:13:13:471:0:0:0,-3.91339,-10 0/0:75.9641:22:22:825:0:0:0,-6.62266,-10 0/0:69.9435:20:20:728:0:0:0,-6.0206,-10 0/0:72.9538:21:21:755:0:0:0,-6.32163,-10 0/0:36.8302:9:9:341:0:0:0,-2.70927,-10 0/0:99:69:69:2544:0:0:0,-10,-10 0/0:66.9332:19:19:722:0:0:0,-5.71957,-10 0/0:60.9126:17:17:617:0:0:0,-5.11751,-10 0/0:36.8302:9:9:328:0:0:0,-2.70927,-10 0/0:45.8611:12:12:439:0:0:0,-3.61236,-10 0/0:24.789:5:5:182:0:0:0,-1.50515,-10 0/0:99:42:42:1574:0:0:0,-10,-10 0/0:99:50:50:1830:0:0:0,-10,-10 0/0:99:43:43:1599:0:0:0,-10,-10 0/0:99:38:38:1413:0:0:0,-10,-10 0/0:24.4711:21:20:749:1:38:0,-1.19941,-10 0/0:57.9023:16:16:586:0:0:0,-4.81648,-10 0/0:84.9948:25:25:946:0:0:0,-7.52575,-10 0/0:99:56:56:2067:0:0:0,-10,-10 0/0:57.9023:16:16:567:0:0:0,-4.81648,-10 0/0:99:44:44:1625:0:0:0,-10,-10 0/0:30.8096:7:7:229:0:0:0,-2.10721,-10 0/0:60.9126:17:17:611:0:0:0,-5.11751,-10 0/0:94.0247:28:28:968:0:0:0,-8.42884,-10 0/0:99:40:40:1504:0:0:0,-10,-10 0/0:75.9641:22:22:807:0:0:0,-6.62266,-10 0/0:99:42:42:1573:0:0:0,-10,-10 0/0:97.0339:29:29:1060:0:0:0,-8.72987,-10 0/0:99:39:39:1436:0:0:0,-10,-10 0/1:0.0275966:9:0:0:9:341:-10,-2.70927,0 0/0:27.7993:6:6:224:0:0:0,-1.80618,-10 0/0:63.9229:18:18:652:0:0:0,-5.41854,-10 0/0:63.9229:18:18:649:0:0:0,-5.41854,-10 0/0:75.9641:22:22:817:0:0:0,-6.62266,-10 0/1:0.0275966:9:0:0:9:329:-10,-2.70927,0 0/0:42.8508:11:11:410:0:0:0,-3.31133,-10 0/0:99:46:46:1676:0:0:0,-10,-10 0/0:97.0339:29:29:1078:0:0:0,-8.72987,-10 0/0:66.9332:19:19:690:0:0:0,-5.71957,-10 0/0:99:51:51:1885:0:0:0,-10,-10 1/1:41.713:27:0:0:27:1012:-10,-8.12781,0 0/0:75.9641:22:22:812:0:0:0,-6.62266,-10 0/0:99:53:53:1918:0:0:0,-10,-10 0/0:88.005:26:26:974:0:0:0,-7.82678,-10 0/0:63.9229:18:18:683:0:0:0,-5.41854,-10 0/0:99:63:63:2340:0:0:0,-10,-10 0/0:57.9023:16:16:567:0:0:0,-4.81648,-10 0/0:54.892:15:15:555:0:0:0,-4.51545,-10 0/0:99:38:38:1411:0:0:0,-10,-10 0/0:45.8611:12:12:409:0:0:0,-3.61236,-10 0/1:99:46:20:741:26:974:-10,0,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:30.8096:7:7:265:0:0:0,-2.10721,-10 0/0:99:47:47:1726:0:0:0,-10,-10 0/0:57.9023:16:16:571:0:0:0,-4.81648,-10 0/0:66.9332:19:19:657:0:0:0,-5.71957,-10 0/0:42.8508:11:11:405:0:0:0,-3.31133,-10 0/0:84.9948:25:25:912:0:0:0,-7.52575,-10 0/0:57.9023:16:16:608:0:0:0,-4.81648,-10 0/0:84.9948:25:25:893:0:0:0,-7.52575,-10 0/0:69.9435:20:20:749:0:0:0,-6.0206,-10 0/0:99:65:65:2396:0:0:0,-10,-10 0/0:88.005:26:26:957:0:0:0,-7.82678,-10 0/0:69.9435:20:20:745:0:0:0,-6.0206,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:88.005:26:26:943:0:0:0,-7.82678,-10 0/0:54.892:15:15:568:0:0:0,-4.51545,-10 0/0:99:47:47:1692:0:0:0,-10,-10 0/0:69.9435:20:20:748:0:0:0,-6.0206,-10 0/0:84.9948:25:25:924:0:0:0,-7.52575,-10 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:97.0339:29:29:1072:0:0:0,-8.72987,-10 0/0:99:35:35:1306:0:0:0,-10,-10 1/1:29.6718:23:0:0:23:841:-10,-6.92369,0 0/0:51.8817:14:14:518:0:0:0,-4.21442,-10 0/0:54.892:15:15:553:0:0:0,-4.51545,-10 0/0:33.8199:8:8:304:0:0:0,-2.40824,-10 0/0:57.9023:16:16:585:0:0:0,-4.81648,-10 0/0:99:52:52:1912:0:0:0,-10,-10 0/1:99:34:22:821:12:447:-10,0,-10 0/0:99:32:32:1137:0:0:0,-9.63296,-10 0/0:78.9743:23:23:860:0:0:0,-6.92369,-10 0/0:99:39:39:1428:0:0:0,-10,-10 0/0:27.7993:6:6:206:0:0:0,-1.80618,-10 0/0:75.9641:22:22:802:0:0:0,-6.62266,-10 0/0:69.9435:20:20:692:0:0:0,-6.0206,-10 0/0:48.8714:13:13:475:0:0:0,-3.91339,-10 0/0:48.8714:13:13:483:0:0:0,-3.91339,-10 0/0:66.9332:19:19:681:0:0:0,-5.71957,-10 0/0:36.8302:9:9:340:0:0:0,-2.70927,-10 scaffold_56 3891367 . C T 1574.92 . AB=0.491935;ABP=3.08035;AC=6;AF=0.0326087;AN=184;AO=62;CIGAR=1X;DP=1795;DPB=1795;DPRA=1.18829;EPP=3.0103;EPPR=18.4487;GTI=1;LEN=1;MEANALT=1;MQM=59.7097;MQMR=59.9706;NS=92;NUMALT=1;ODDS=6.58577;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2242;QR=62743;RO=1733;RPP=137.642;RPPR=3766.17;RUN=1;SAF=31;SAP=3.0103;SAR=31;SRF=811;SRP=18.4487;SRR=922;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.7288:13:13:448:0:0:0,-3.91339,-10 0/0:40.667:7:7:236:0:0:0,-2.10721,-10 0/1:99:21:10:371:11:416:-10,0,-10 0/0:55.7185:12:12:401:0:0:0,-3.61236,-10 0/0:79.8009:20:20:714:0:0:0,-6.0206,-10 0/0:34.6464:5:5:183:0:0:0,-1.50515,-10 0/0:99:34:34:1218:0:0:0,-10,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:61.7391:14:14:528:0:0:0,-4.21442,-10 0/0:34.6464:5:5:190:0:0:0,-1.50515,-10 0/0:43.6773:8:8:295:0:0:0,-2.40824,-10 0/0:31.6361:4:4:151:0:0:0,-1.20412,-10 0/0:99:29:29:1037:0:0:0,-8.72987,-10 0/0:76.9935:36:35:1226:1:38:0,-5.48078,-10 0/0:99:30:30:1069:0:0:0,-9.0309,-10 0/0:70.77:17:17:610:0:0:0,-5.11751,-10 0/0:61.7391:14:14:524:0:0:0,-4.21442,-10 0/0:43.6773:8:8:304:0:0:0,-2.40824,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:99:34:34:1251:0:0:0,-10,-10 0/0:82.8111:21:21:723:0:0:0,-6.32163,-10 0/0:99:38:38:1378:0:0:0,-10,-10 0/0:46.6876:9:9:340:0:0:0,-2.70927,-10 0/0:73.7803:18:18:659:0:0:0,-5.41854,-10 0/0:73.7803:18:18:647:0:0:0,-5.41854,-10 0/0:99:27:27:983:0:0:0,-8.12781,-10 0/0:67.7597:16:16:585:0:0:0,-4.81648,-10 0/0:79.8009:20:20:733:0:0:0,-6.0206,-10 0/0:52.7082:11:11:404:0:0:0,-3.31133,-10 0/0:88.8314:23:23:862:0:0:0,-6.92369,-10 0/1:0.000154173:4:0:0:4:139:-10,-1.20412,0 0/0:61.7391:14:14:519:0:0:0,-4.21442,-10 0/0:76.7906:19:19:707:0:0:0,-5.71957,-10 0/0:52.7082:11:11:393:0:0:0,-3.31133,-10 0/0:64.7494:15:15:542:0:0:0,-4.51545,-10 0/0:40.667:7:7:265:0:0:0,-2.10721,-10 0/0:70.77:17:17:622:0:0:0,-5.11751,-10 0/0:99:32:32:1106:0:0:0,-9.63296,-10 0/0:64.7494:15:15:547:0:0:0,-4.51545,-10 0/0:61.7391:14:14:519:0:0:0,-4.21442,-10 0/0:79.8009:20:20:706:0:0:0,-6.0206,-10 0/0:99:27:27:986:0:0:0,-8.12781,-10 0/0:58.7288:13:13:469:0:0:0,-3.91339,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:85.8213:22:22:816:0:0:0,-6.62266,-10 0/0:70.77:17:17:630:0:0:0,-5.11751,-10 0/0:99:44:44:1627:0:0:0,-10,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:37.6567:6:6:227:0:0:0,-1.80618,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:28.6258:3:3:114:0:0:0,-0.90309,-10 0/1:99:34:14:527:20:684:-10,0,-10 0/0:79.8009:20:20:681:0:0:0,-6.0206,-10 0/0:28.6258:3:3:114:0:0:0,-0.90309,-10 0/0:99:42:42:1541:0:0:0,-10,-10 0/0:58.7288:13:13:472:0:0:0,-3.91339,-10 0/0:99:28:28:984:0:0:0,-8.42884,-10 0/0:46.6876:9:9:324:0:0:0,-2.70927,-10 0/0:64.7494:15:15:550:0:0:0,-4.51545,-10 0/0:49.6979:10:10:365:0:0:0,-3.0103,-10 0/1:99:28:14:492:14:520:-10,0,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/1:99:17:12:432:5:190:-10,0,-10 0/0:70.77:17:17:623:0:0:0,-5.11751,-10 0/0:99:32:32:1118:0:0:0,-9.63296,-10 0/0:64.7494:15:15:517:0:0:0,-4.51545,-10 0/0:61.7391:14:14:498:0:0:0,-4.21442,-10 0/0:99:41:41:1485:0:0:0,-10,-10 0/0:67.7597:16:16:594:0:0:0,-4.81648,-10 0/0:76.7906:19:19:656:0:0:0,-5.71957,-10 0/0:88.8314:23:23:843:0:0:0,-6.92369,-10 0/0:82.8111:21:21:773:0:0:0,-6.32163,-10 0/0:34.6464:5:5:178:0:0:0,-1.50515,-10 0/0:94.8509:25:25:869:0:0:0,-7.52575,-10 0/0:61.7391:14:14:499:0:0:0,-4.21442,-10 0/0:46.6876:9:9:320:0:0:0,-2.70927,-10 0/0:64.7494:15:15:559:0:0:0,-4.51545,-10 0/0:55.7185:12:12:445:0:0:0,-3.61236,-10 0/0:49.6979:10:10:332:0:0:0,-3.0103,-10 0/0:99:45:45:1641:0:0:0,-10,-10 0/0:99:38:38:1411:0:0:0,-10,-10 0/0:99:27:27:955:0:0:0,-8.12781,-10 0/0:94.8509:25:25:926:0:0:0,-7.52575,-10 0/0:97.8596:26:26:959:0:0:0,-7.82678,-10 0/0:34.6464:5:5:185:0:0:0,-1.50515,-10 0/0:79.8009:20:20:729:0:0:0,-6.0206,-10 0/0:82.8111:21:21:734:0:0:0,-6.32163,-10 0/0:37.6567:6:6:205:0:0:0,-1.80618,-10 0/1:99:20:13:458:7:255:-10,0,-10 0/0:52.7082:11:11:379:0:0:0,-3.31133,-10 0/0:70.77:17:17:615:0:0:0,-5.11751,-10 scaffold_56 4054091 . T C 1234.98 . AB=0.522727;ABP=3.40511;AC=3;AF=0.0163043;AN=184;AO=47;CIGAR=1X;DP=2013;DPB=2013;DPRA=1.41935;EPP=3.0565;EPPR=5.05567;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9592;NS=92;NUMALT=1;ODDS=4.54236;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1733;QR=71737;RO=1963;RPP=105.07;RPPR=3958.65;RUN=1;SAF=23;SAP=3.0565;SAR=24;SRF=964;SRP=4.3654;SRR=999;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.9643:12:12:425:0:0:0,-3.61236,-10 0/0:40.9437:10:10:354:0:0:0,-3.0103,-10 0/0:89.1082:26:26:940:0:0:0,-7.82678,-10 0/0:55.9952:15:15:505:0:0:0,-4.51545,-10 0/0:59.0055:16:16:587:0:0:0,-4.81648,-10 0/0:34.9231:8:8:295:0:0:0,-2.40824,-10 0/0:99:43:43:1536:0:0:0,-10,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/0:65.0261:18:18:673:0:0:0,-5.41854,-10 0/0:19.8716:3:3:114:0:0:0,-0.90309,-10 0/0:40.9437:10:10:369:0:0:0,-3.0103,-10 0/0:40.9437:10:10:358:0:0:0,-3.0103,-10 0/0:99:35:35:1272:0:0:0,-10,-10 0/0:99:43:43:1594:0:0:0,-10,-10 0/0:99:35:35:1285:0:0:0,-10,-10 0/0:77.0672:22:22:820:0:0:0,-6.62266,-10 0/0:98.1305:29:29:1077:0:0:0,-8.72987,-10 0/0:46.9643:12:12:441:0:0:0,-3.61236,-10 0/0:74.057:21:21:792:0:0:0,-6.32163,-10 0/0:99:41:40:1458:0:0:0,-10,-10 0/0:74.057:21:21:785:0:0:0,-6.32163,-10 0/0:83.0878:24:24:877:0:0:0,-7.22472,-10 0/0:49.9746:13:13:468:0:0:0,-3.91339,-10 0/0:89.1082:26:26:968:0:0:0,-7.82678,-10 0/0:77.0672:22:22:817:0:0:0,-6.62266,-10 0/0:89.1082:26:26:936:0:0:0,-7.82678,-10 0/0:49.9746:13:13:464:0:0:0,-3.91339,-10 0/0:55.9952:15:15:535:0:0:0,-4.51545,-10 0/0:86.0981:25:25:892:0:0:0,-7.52575,-10 0/0:99:47:47:1709:0:0:0,-10,-10 0/0:28.9025:6:6:183:0:0:0,-1.80618,-10 0/0:40.9437:10:10:361:0:0:0,-3.0103,-10 0/0:92.1166:28:27:1001:0:0:0,-8.12781,-10 0/0:49.9746:13:13:468:0:0:0,-3.91339,-10 0/0:49.9746:13:13:462:0:0:0,-3.91339,-10 0/0:52.9849:14:14:503:0:0:0,-4.21442,-10 0/0:80.0776:23:23:814:0:0:0,-6.92369,-10 0/0:99:34:34:1282:0:0:0,-10,-10 0/0:55.9952:15:15:567:0:0:0,-4.51545,-10 0/0:71.0467:20:20:701:0:0:0,-6.0206,-10 0/0:80.0776:23:23:852:0:0:0,-6.92369,-10 0/0:86.0981:25:25:934:0:0:0,-7.52575,-10 0/0:80.0776:23:23:839:0:0:0,-6.92369,-10 0/0:99:47:47:1739:0:0:0,-10,-10 0/0:86.0981:25:25:938:0:0:0,-7.52575,-10 0/0:55.9952:15:15:563:0:0:0,-4.51545,-10 0/0:99:48:48:1739:0:0:0,-10,-10 0/0:63.0162:34:33:1193:1:38:0,-4.90354,-10 0/0:52.9849:14:14:504:0:0:0,-4.21442,-10 0/0:99:45:45:1623:0:0:0,-10,-10 0/0:49.9746:13:13:493:0:0:0,-3.91339,-10 0/0:99:32:32:1172:0:0:0,-9.63296,-10 0/0:68.0364:19:19:700:0:0:0,-5.71957,-10 0/0:31.9128:7:7:253:0:0:0,-2.10721,-10 0/0:99:41:41:1515:0:0:0,-10,-10 0/0:68.0364:19:19:709:0:0:0,-5.71957,-10 0/0:77.0672:22:22:787:0:0:0,-6.62266,-10 0/0:28.9025:6:6:206:0:0:0,-1.80618,-10 0/0:62.0158:17:17:627:0:0:0,-5.11751,-10 0/0:40.9437:10:10:376:0:0:0,-3.0103,-10 0/0:95.1247:28:28:1027:0:0:0,-8.42884,-10 0/0:92.1166:27:27:987:0:0:0,-8.12781,-10 0/1:99:37:14:497:22:789:-10,0,-10 0/0:40.9437:10:10:347:0:0:0,-3.0103,-10 0/0:59.0055:16:16:588:0:0:0,-4.81648,-10 0/1:99:32:17:613:15:564:-10,0,-10 0/1:99:19:10:340:9:342:-10,0,-10 0/0:59.0055:16:16:584:0:0:0,-4.81648,-10 0/0:99:49:49:1825:0:0:0,-10,-10 0/0:43.954:11:11:415:0:0:0,-3.31133,-10 0/0:86.0981:25:25:921:0:0:0,-7.52575,-10 0/0:92.1166:27:27:952:0:0:0,-8.12781,-10 0/0:99:34:34:1234:0:0:0,-10,-10 0/0:80.0776:23:23:841:0:0:0,-6.92369,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:55.9952:15:15:549:0:0:0,-4.51545,-10 0/0:49.9746:13:13:481:0:0:0,-3.91339,-10 0/0:83.0878:24:24:901:0:0:0,-7.22472,-10 0/0:22.8819:4:4:151:0:0:0,-1.20412,-10 0/0:19.8716:3:3:102:0:0:0,-0.90309,-9.52 0/0:99:41:41:1511:0:0:0,-10,-10 0/0:74.057:21:21:786:0:0:0,-6.32163,-10 0/0:98.1305:29:29:1063:0:0:0,-8.72987,-10 0/0:59.0055:16:16:598:0:0:0,-4.81648,-10 0/0:68.0364:19:19:704:0:0:0,-5.71957,-10 0/0:25.8922:5:5:165:0:0:0,-1.50515,-10 0/0:65.0261:18:18:659:0:0:0,-5.41854,-10 0/0:49.9746:13:13:485:0:0:0,-3.91339,-10 0/0:37.9334:9:9:326:0:0:0,-2.70927,-10 0/0:71.0467:20:20:718:0:0:0,-6.0206,-10 0/0:49.9746:13:13:494:0:0:0,-3.91339,-10 0/0:86.0981:25:25:904:0:0:0,-7.52575,-10 scaffold_56 4060783 . C T 228.18 . AB=0.521739;ABP=3.10471;AC=2;AF=0.0108696;AN=184;AO=15;CIGAR=1X;DP=1547;DPB=1547;DPRA=0.861737;EPP=4.31318;EPPR=5.05972;GTI=1;LEN=1;MEANALT=1;MQM=59.4667;MQMR=59.9431;NS=92;NUMALT=1;ODDS=10.8642;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=480;QR=55299;RO=1530;RPP=35.5824;RPPR=3061.56;RUN=1;SAF=9;SAP=4.31318;SAR=6;SRF=717;SRP=16.0902;SRR=813;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:71.2655:11:11:365:0:0:0,-3.31133,-10 0/0:59.2243:7:7:265:0:0:0,-2.10721,-10 0/0:98.3579:20:20:678:0:0:0,-6.0206,-10 0/0:83.3067:15:15:564:0:0:0,-4.51545,-10 0/0:65.2449:9:9:342:0:0:0,-2.70927,-10 0/0:56.214:6:6:228:0:0:0,-1.80618,-10 0/0:99:37:37:1335:0:0:0,-10,-10 0/0:99:28:28:987:0:0:0,-8.42884,-10 0/0:71.2655:11:11:381:0:0:0,-3.31133,-10 0/0:56.214:6:6:222:0:0:0,-1.80618,-10 0/0:56.214:6:6:228:0:0:0,-1.80618,-10 0/0:53.2037:5:5:190:0:0:0,-1.50515,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:99:33:32:1124:0:0:0,-9.63296,-10 0/0:99:24:24:883:0:0:0,-7.22472,-10 0/0:83.3067:15:15:540:0:0:0,-4.51545,-10 0/0:99:21:21:674:0:0:0,-6.32163,-10 0/0:71.2655:11:11:416:0:0:0,-3.31133,-10 0/0:99:22:22:761:0:0:0,-6.62266,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:99:21:21:764:0:0:0,-6.32163,-10 0/0:99:28:28:966:0:0:0,-8.42884,-10 0/0:59.2243:7:7:265:0:0:0,-2.10721,-10 0/0:95.3477:19:19:622:0:0:0,-5.71957,-10 0/0:71.2655:11:11:406:0:0:0,-3.31133,-10 0/0:99:34:34:1267:0:0:0,-10,-10 0/0:48.2707:12:11:352:1:16:0,-0.933179,-10 0/0:80.2964:14:14:507:0:0:0,-4.21442,-10 0/0:89.3273:17:17:614:0:0:0,-5.11751,-10 0/0:99:30:30:1085:0:0:0,-9.0309,-10 0/0:65.2449:9:9:322:0:0:0,-2.70927,-10 0/0:68.2552:10:10:373:0:0:0,-3.0103,-10 0/0:99:22:22:780:0:0:0,-6.62266,-10 0/0:74.2758:12:12:428:0:0:0,-3.61236,-10 0/0:92.3375:18:18:650:0:0:0,-5.41854,-10 0/0:59.2243:7:7:264:0:0:0,-2.10721,-10 0/0:80.2964:14:14:506:0:0:0,-4.21442,-10 0/0:99:31:31:1162:0:0:0,-9.33193,-10 0/0:59.2243:7:7:241:0:0:0,-2.10721,-10 0/0:59.2243:7:7:257:0:0:0,-2.10721,-10 0/0:99:29:29:1088:0:0:0,-8.72987,-10 0/0:92.3375:18:18:635:0:0:0,-5.41854,-10 0/0:83.3067:15:15:556:0:0:0,-4.51545,-10 0/0:99:25:25:933:0:0:0,-7.52575,-10 0/0:92.3375:18:18:660:0:0:0,-5.41854,-10 0/0:83.3067:15:15:564:0:0:0,-4.51545,-10 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:99:22:22:829:0:0:0,-6.62266,-10 0/0:86.317:16:16:546:0:0:0,-4.81648,-10 0/0:99:23:23:804:0:0:0,-6.92369,-10 0/0:53.2037:5:5:164:0:0:0,-1.50515,-10 0/0:99:25:25:880:0:0:0,-7.52575,-10 0/0:71.2655:11:11:384:0:0:0,-3.31133,-10 0/0:50.1934:4:4:152:0:0:0,-1.20412,-10 0/0:99:36:36:1298:0:0:0,-10,-10 0/0:86.317:16:16:548:0:0:0,-4.81648,-10 0/0:77.2861:13:13:456:0:0:0,-3.91339,-10 0/1:1.54953e-06:8:0:0:8:280:-10,-2.40824,0 0/0:65.2449:9:9:334:0:0:0,-2.70927,-10 0/0:59.0625:16:15:550:1:16:0,-2.01236,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:89.3273:17:17:641:0:0:0,-5.11751,-10 0/0:99:36:36:1255:0:0:0,-10,-10 0/0:68.2552:10:10:371:0:0:0,-3.0103,-10 0/0:74.2758:12:12:434:0:0:0,-3.61236,-10 0/0:99:22:22:786:0:0:0,-6.62266,-10 0/0:86.317:16:16:574:0:0:0,-4.81648,-10 0/0:53.2037:5:5:167:0:0:0,-1.50515,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:65.2449:9:9:338:0:0:0,-2.70927,-10 0/0:83.3067:15:15:564:0:0:0,-4.51545,-10 0/0:75.7413:22:21:776:1:16:0,-3.68024,-10 0/0:92.3375:18:18:646:0:0:0,-5.41854,-10 0/0:80.2964:14:14:521:0:0:0,-4.21442,-10 0/0:99:27:27:1013:0:0:0,-8.12781,-10 0/0:83.3067:15:15:552:0:0:0,-4.51545,-10 0/0:71.2655:11:11:403:0:0:0,-3.31133,-10 0/0:65.2449:9:9:336:0:0:0,-2.70927,-10 0/0:65.2449:9:9:322:0:0:0,-2.70927,-10 0/0:59.2243:7:7:259:0:0:0,-2.10721,-10 0/0:99:38:38:1420:0:0:0,-10,-10 0/0:99:28:28:992:0:0:0,-8.42884,-10 0/0:71.2655:11:11:398:0:0:0,-3.31133,-10 0/1:85.2444:15:11:404:4:152:-10,0,-10 0/0:99:25:25:909:0:0:0,-7.52575,-10 0/0:53.2037:5:5:190:0:0:0,-1.50515,-10 0/0:86.317:17:16:597:0:0:0,-4.81648,-10 0/0:71.2655:11:11:365:0:0:0,-3.31133,-10 0/0:47.1831:3:3:111:0:0:0,-0.90309,-10 0/0:86.317:16:16:602:0:0:0,-4.81648,-10 0/0:62.2346:8:8:286:0:0:0,-2.40824,-10 0/0:65.2449:9:9:329:0:0:0,-2.70927,-10 scaffold_56 4072850 . C T 638.847 . AB=0.675676;ABP=12.9286;AC=2;AF=0.0108696;AN=184;AO=26;CIGAR=1X;DP=1717;DPB=1717;DPRA=1.11138;EPP=4.34659;EPPR=4.96347;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=5.78709;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=951;QR=61346;RO=1691;RPP=51.1168;RPPR=3486.37;RUN=1;SAF=16;SAP=6.01695;SAR=10;SRF=845;SRP=3.01158;SRR=846;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.2571:11:11:395:0:0:0,-3.31133,-10 0/0:52.2571:11:11:395:0:0:0,-3.31133,-10 0/0:70.3189:17:17:622:0:0:0,-5.11751,-10 0/0:49.2468:10:10:350:0:0:0,-3.0103,-10 0/0:73.3292:18:18:636:0:0:0,-5.41854,-10 0/0:58.2777:13:13:476:0:0:0,-3.91339,-10 0/0:99:36:36:1268:0:0:0,-10,-10 0/0:99:27:27:942:0:0:0,-8.12781,-10 0/0:70.3189:17:17:644:0:0:0,-5.11751,-10 0/0:25.1644:2:2:76:0:0:0,-0.60206,-7.22 0/0:28.1747:3:3:114:0:0:0,-0.90309,-10 0/0:46.2365:9:9:340:0:0:0,-2.70927,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:99:27:27:960:0:0:0,-8.12781,-10 0/0:46.4641:25:24:900:1:38:0,-2.32781,-10 0/0:58.2777:13:13:472:0:0:0,-3.91339,-10 0/0:52.2571:11:11:411:0:0:0,-3.31133,-10 0/0:88.3802:23:23:851:0:0:0,-6.92369,-10 0/0:99:35:35:1258:0:0:0,-10,-10 0/0:79.3499:20:20:688:0:0:0,-6.0206,-10 0/0:76.3395:19:19:719:0:0:0,-5.71957,-10 0/0:43.2262:8:8:299:0:0:0,-2.40824,-10 0/0:70.3189:17:17:599:0:0:0,-5.11751,-10 0/0:61.288:14:14:496:0:0:0,-4.21442,-10 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:97.4075:26:26:899:0:0:0,-7.82678,-10 0/0:67.3086:16:16:606:0:0:0,-4.81648,-10 0/0:79.3499:20:20:695:0:0:0,-6.0206,-10 0/0:99:33:33:1182:0:0:0,-9.93399,-10 0/0:28.1747:3:3:112:0:0:0,-0.90309,-10 0/0:52.2571:11:11:407:0:0:0,-3.31133,-10 0/0:76.3395:19:19:707:0:0:0,-5.71957,-10 0/0:61.288:14:14:492:0:0:0,-4.21442,-10 0/0:76.3395:19:19:683:0:0:0,-5.71957,-10 0/0:34.1953:5:5:185:0:0:0,-1.50515,-10 0/0:58.2777:13:13:493:0:0:0,-3.91339,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:82.36:21:21:782:0:0:0,-6.32163,-10 0/0:82.36:21:21:773:0:0:0,-6.32163,-10 0/0:94.3993:25:25:921:0:0:0,-7.52575,-10 0/0:73.3292:18:18:666:0:0:0,-5.41854,-10 0/0:67.3086:16:16:579:0:0:0,-4.81648,-10 0/0:85.3702:22:22:759:0:0:0,-6.62266,-10 0/0:73.3292:18:18:625:0:0:0,-5.41854,-10 0/0:79.3499:20:20:747:0:0:0,-6.0206,-10 0/0:99:53:53:1878:0:0:0,-10,-10 0/0:76.3395:19:19:706:0:0:0,-5.71957,-10 0/0:40.2159:7:7:260:0:0:0,-2.10721,-10 0/0:99:28:28:987:0:0:0,-8.42884,-10 0/0:67.3086:16:16:604:0:0:0,-4.81648,-10 0/0:91.39:24:24:867:0:0:0,-7.22472,-10 0/0:46.2365:9:9:313:0:0:0,-2.70927,-10 0/0:46.2365:9:9:309:0:0:0,-2.70927,-10 0/0:99:42:42:1540:0:0:0,-10,-10 0/0:61.288:14:14:525:0:0:0,-4.21442,-10 0/0:76.3395:19:19:681:0:0:0,-5.71957,-10 0/0:40.2159:7:7:250:0:0:0,-2.10721,-10 0/0:73.3292:18:18:678:0:0:0,-5.41854,-10 0/0:49.2468:10:10:378:0:0:0,-3.0103,-10 0/0:88.3802:23:23:846:0:0:0,-6.92369,-10 0/0:52.2571:11:11:373:0:0:0,-3.31133,-10 0/0:99:41:41:1531:0:0:0,-10,-10 0/0:70.3189:17:17:635:0:0:0,-5.11751,-10 0/0:52.2571:11:11:358:0:0:0,-3.31133,-10 0/0:99:38:38:1328:0:0:0,-10,-10 0/0:91.39:24:24:875:0:0:0,-7.22472,-10 0/0:58.2777:13:13:487:0:0:0,-3.91339,-10 0/0:97.4075:26:26:946:0:0:0,-7.82678,-10 0/0:58.2777:13:13:463:0:0:0,-3.91339,-10 0/0:43.2262:8:8:298:0:0:0,-2.40824,-10 0/0:99:31:31:1112:0:0:0,-9.33193,-10 0/0:99:31:31:1145:0:0:0,-9.33193,-10 0/0:73.3292:18:18:635:0:0:0,-5.41854,-10 0/0:99:30:30:1062:0:0:0,-9.0309,-10 0/0:40.2159:7:7:253:0:0:0,-2.10721,-10 0/0:40.2159:7:7:266:0:0:0,-2.10721,-10 0/0:73.3292:18:18:674:0:0:0,-5.41854,-10 0/0:43.2262:8:8:297:0:0:0,-2.40824,-10 0/0:49.2468:10:10:380:0:0:0,-3.0103,-10 0/0:99:27:27:991:0:0:0,-8.12781,-10 0/0:85.3702:22:22:790:0:0:0,-6.62266,-10 0/0:58.2777:13:13:475:0:0:0,-3.91339,-10 0/0:58.2777:13:13:457:0:0:0,-3.91339,-10 0/0:79.3499:20:20:739:0:0:0,-6.0206,-10 0/0:46.2365:9:9:312:0:0:0,-2.70927,-10 0/0:70.3189:17:17:635:0:0:0,-5.11751,-10 0/0:49.2468:10:10:369:0:0:0,-3.0103,-10 0/1:99:11:5:190:6:224:-10,0,-10 0/0:88.3802:23:23:829:0:0:0,-6.92369,-10 0/1:99:26:7:263:19:689:-10,0,-10 0/0:76.3395:19:19:672:0:0:0,-5.71957,-10 scaffold_56 4140089 . G A 6755.28 . AB=0.52669;ABP=4.74902;AC=30;AF=0.163043;AN=184;AO=243;CIGAR=1X;DP=1444;DPB=1444;DPRA=1.18171;EPP=9.52472;EPPR=3.02657;GTI=2;LEN=1;MEANALT=1;MQM=59.893;MQMR=59.9284;NS=92;NUMALT=1;ODDS=0.148993;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8976;QR=44291;RO=1201;RPP=463.479;RPPR=2365.14;RUN=1;SAF=110;SAP=7.7375;SAR=133;SRF=608;SRP=3.41711;SRR=593;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.1075:12:12:452:0:0:0,-3.61236,-10 1/1:8.78138:8:0:0:8:291:-10,-2.40824,0 0/0:47.1075:12:12:442:0:0:0,-3.61236,-10 0/0:68.1796:19:19:694:0:0:0,-5.71957,-10 0/0:35.0663:8:8:298:0:0:0,-2.40824,-10 0/0:44.0972:11:11:416:0:0:0,-3.31133,-10 0/0:80.2207:23:23:858:0:0:0,-6.92369,-10 0/0:74.2001:21:21:766:0:0:0,-6.32163,-10 0/0:41.0869:10:10:370:0:0:0,-3.0103,-10 0/0:20.0148:3:3:104:0:0:0,-0.90309,-9.70667 0/0:32.056:7:7:259:0:0:0,-2.10721,-10 0/0:17.0045:2:2:76:0:0:0,-0.60206,-7.22 0/0:92.2615:27:27:966:0:0:0,-8.12781,-10 0/1:99:29:14:520:15:546:-10,0,-10 0/0:71.1898:20:20:711:0:0:0,-6.0206,-10 0/0:95.2713:28:28:1026:0:0:0,-8.42884,-10 0/0:89.2506:26:26:961:0:0:0,-7.82678,-10 0/0:44.0972:11:11:384:0:0:0,-3.31133,-10 0/0:56.1384:15:15:542:0:0:0,-4.51545,-10 0/1:99:34:11:386:23:870:-10,0,-10 0/0:62.159:17:17:624:0:0:0,-5.11751,-10 0/1:99:18:9:342:9:342:-10,0,-10 0/0:50.1178:13:13:482:0:0:0,-3.91339,-10 0/0:59.1487:16:16:556:0:0:0,-4.81648,-10 0/0:62.159:17:17:628:0:0:0,-5.11751,-10 0/0:62.159:17:17:628:0:0:0,-5.11751,-10 0/0:44.0972:11:11:416:0:0:0,-3.31133,-10 1/1:29.8535:15:0:0:15:566:-10,-4.51545,0 0/0:68.1796:19:19:702:0:0:0,-5.71957,-10 0/1:99:21:11:417:10:371:-10,0,-10 0/0:26.0354:5:5:168:0:0:0,-1.50515,-10 0/0:29.0457:6:6:206:0:0:0,-1.80618,-10 0/0:68.1796:19:19:713:0:0:0,-5.71957,-10 0/1:0.431083:7:0:0:7:265:-10,-2.10721,0 0/0:71.1898:20:20:754:0:0:0,-6.0206,-10 0/0:38.0766:9:9:342:0:0:0,-2.70927,-10 0/0:38.0766:9:9:326:0:0:0,-2.70927,-10 0/1:99:15:8:300:7:266:-10,0,-10 0/0:53.1281:14:14:530:0:0:0,-4.21442,-10 0/0:59.1487:16:16:594:0:0:0,-4.81648,-10 0/0:71.1898:20:20:723:0:0:0,-6.0206,-10 0/1:7.09064:14:13:494:1:38:-0.731708,0,-10 1/1:29.8535:15:0:0:15:545:-10,-4.51545,0 0/0:86.2408:25:25:919:0:0:0,-7.52575,-10 0/0:53.1281:14:14:516:0:0:0,-4.21442,-10 0/0:48.6434:21:20:737:1:16:0,-3.39941,-10 0/0:92.2615:27:27:1015:0:0:0,-8.12781,-10 0/1:99:15:8:295:7:258:-10,0,-10 0/0:56.1384:15:15:564:0:0:0,-4.51545,-10 0/1:99:32:15:553:17:634:-10,0,-10 0/0:41.0869:10:10:372:0:0:0,-3.0103,-10 0/0:83.231:24:24:901:0:0:0,-7.22472,-10 0/0:41.0869:10:10:366:0:0:0,-3.0103,-10 0/0:29.0457:6:6:228:0:0:0,-1.80618,-10 0/0:99:34:34:1249:0:0:0,-10,-10 0/0:50.1178:13:13:491:0:0:0,-3.91339,-10 0/0:41.0869:10:10:365:0:0:0,-3.0103,-10 0/0:29.0457:6:6:205:0:0:0,-1.80618,-10 0/0:53.1281:14:14:504:0:0:0,-4.21442,-10 1/1:20.8226:12:0:0:12:405:-10,-3.61236,0 0/0:89.2506:26:26:933:0:0:0,-7.82678,-10 0/1:0.431083:7:0:0:7:263:-10,-2.10721,0 0/0:98.2741:29:29:1049:0:0:0,-8.72987,-10 0/0:38.0766:9:9:316:0:0:0,-2.70927,-10 0/0:50.1178:13:13:490:0:0:0,-3.91339,-10 0/1:99:24:10:380:14:532:-10,0,-10 0/1:99:20:14:522:6:206:-10,0,-10 1/1:8.78138:8:0:0:8:303:-10,-2.40824,0 0/1:99:28:13:489:15:564:-10,0,-10 1/1:26.8432:14:0:0:14:530:-10,-4.21442,0 0/0:41.0869:10:10:380:0:0:0,-3.0103,-10 0/0:74.2001:21:21:761:0:0:0,-6.32163,-10 0/0:71.1898:20:20:730:0:0:0,-6.0206,-10 0/0:53.1281:14:14:524:0:0:0,-4.21442,-10 0/0:83.231:24:24:906:0:0:0,-7.22472,-10 0/0:41.0869:10:10:380:0:0:0,-3.0103,-10 0/0:32.056:7:7:265:0:0:0,-2.10721,-10 1/1:17.8123:11:0:0:11:415:-10,-3.31133,0 0/0:26.0354:5:5:190:0:0:0,-1.50515,-10 0/0:50.1178:13:13:492:0:0:0,-3.91339,-10 0/0:89.2506:26:26:966:0:0:0,-7.82678,-10 0/0:74.1871:30:29:1058:1:16:0,-5.95378,-10 0/0:56.1384:15:15:525:0:0:0,-4.51545,-10 0/0:59.1487:16:16:605:0:0:0,-4.81648,-10 0/1:99:17:7:265:10:358:-10,0,-10 0/0:44.0972:11:11:406:0:0:0,-3.31133,-10 1/1:14.802:10:0:0:10:376:-10,-3.0103,0 0/0:62.159:17:17:638:0:0:0,-5.11751,-10 0/0:17.0045:2:2:76:0:0:0,-0.60206,-7.22 0/0:47.1075:12:12:456:0:0:0,-3.61236,-10 0/0:74.2001:21:21:771:0:0:0,-6.32163,-10 0/0:32.056:7:7:262:0:0:0,-2.10721,-10 scaffold_56 4140105 . G A 5002.53 . AB=0.563158;ABP=9.59329;AC=17;AF=0.0923913;AN=184;AO=184;CIGAR=1X;DP=1440;DPB=1440;DPRA=1.36876;EPP=8.72222;EPPR=4.89455;GTI=1;LEN=1;MEANALT=1.07143;MQM=59.8152;MQMR=59.9378;NS=92;NUMALT=1;ODDS=0.53177;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6791;QR=45764;RO=1255;RPP=402.561;RPPR=2710.86;RUN=1;SAF=103;SAP=8.72222;SAR=81;SRF=609;SRP=5.37902;SRR=646;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:37.6029:12:12:424:0:0:0,-3.61236,-10 0/0:25.5617:8:8:271:0:0:0,-2.40824,-10 0/0:34.5926:11:11:404:0:0:0,-3.31133,-10 0/0:58.675:19:19:684:0:0:0,-5.71957,-10 0/0:25.5617:8:8:304:0:0:0,-2.40824,-10 0/0:34.5926:11:11:417:0:0:0,-3.31133,-10 0/1:99:23:12:451:11:411:-10,0,-10 0/0:64.6956:21:21:766:0:0:0,-6.32163,-10 0/0:31.5823:10:10:357:0:0:0,-3.0103,-10 0/0:10.5102:3:3:92:0:0:0,-0.90309,-8.58667 0/0:22.5514:7:7:264:0:0:0,-2.10721,-10 0/0:7.49987:2:2:76:0:0:0,-0.60206,-7.22 0/1:99:27:13:467:14:532:-10,0,-10 0/0:88.7774:29:29:1060:0:0:0,-8.72987,-10 0/0:61.6853:20:20:681:0:0:0,-6.0206,-10 0/1:99:27:17:635:10:378:-10,0,-10 0/1:99:26:7:261:19:719:-10,0,-10 0/0:34.5926:11:11:386:0:0:0,-3.31133,-10 0/0:46.6338:15:15:528:0:0:0,-4.51545,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:52.6544:17:17:632:0:0:0,-5.11751,-10 0/0:55.6647:18:18:636:0:0:0,-5.41854,-10 0/0:40.6132:13:13:475:0:0:0,-3.91339,-10 0/0:49.6441:16:16:559:0:0:0,-4.81648,-10 0/0:52.6544:17:17:583:0:0:0,-5.11751,-10 0/0:27.4171:17:16:563:1:16:0,-2.28706,-10 0/0:34.5926:11:11:379:0:0:0,-3.31133,-10 0/0:43.6235:14:14:508:0:0:0,-4.21442,-10 1/1:52.196:19:0:0:19:722:-10,-5.71957,0 0/0:64.6956:21:21:734:0:0:0,-6.32163,-10 0/0:16.5308:5:5:168:0:0:0,-1.50515,-10 0/0:19.5411:6:6:225:0:0:0,-1.80618,-10 1/1:52.196:19:0:0:19:697:-10,-5.71957,0 0/0:22.5514:7:7:254:0:0:0,-2.10721,-10 0/0:61.6853:20:20:731:0:0:0,-6.0206,-10 0/0:28.572:9:9:333:0:0:0,-2.70927,-10 0/0:28.572:9:9:322:0:0:0,-2.70927,-10 0/0:46.6338:15:15:547:0:0:0,-4.51545,-10 0/0:49.6441:16:16:606:0:0:0,-4.81648,-10 0/0:49.6441:16:16:577:0:0:0,-4.81648,-10 0/1:99:20:9:312:11:397:-10,0,-10 0/0:40.6132:13:13:494:0:0:0,-3.91339,-10 0/0:46.6338:15:15:525:0:0:0,-4.51545,-10 0/0:76.7368:25:25:920:0:0:0,-7.52575,-10 0/0:43.6235:14:14:514:0:0:0,-4.21442,-10 0/0:64.6956:21:21:782:0:0:0,-6.32163,-10 0/0:82.7574:27:27:1009:0:0:0,-8.12781,-10 0/0:46.6338:15:15:557:0:0:0,-4.51545,-10 0/0:46.6338:15:15:540:0:0:0,-4.51545,-10 0/0:97.8045:32:32:1153:0:0:0,-9.63296,-10 1/1:25.1033:10:0:0:10:375:-10,-3.0103,0 0/0:73.7265:24:24:901:0:0:0,-7.22472,-10 0/0:31.5823:10:10:365:0:0:0,-3.0103,-10 0/0:19.5411:6:6:226:0:0:0,-1.80618,-10 0/0:97.8045:32:32:1176:0:0:0,-9.63296,-10 0/0:40.6132:13:13:494:0:0:0,-3.91339,-10 0/0:31.5823:10:10:370:0:0:0,-3.0103,-10 0/1:0.627962:6:0:0:6:201:-10,-1.80618,0 0/0:43.6235:14:14:510:0:0:0,-4.21442,-10 0/0:37.6029:12:12:385:0:0:0,-3.61236,-10 0/1:99:26:9:333:17:620:-10,0,-10 0/0:22.5514:7:7:264:0:0:0,-2.10721,-10 1/1:79.2886:29:0:0:28:1008:-10,-8.42884,0 0/1:69.8714:9:2:63:7:265:-10,0,-4.83203 0/0:40.6132:13:13:494:0:0:0,-3.91339,-10 0/0:73.7265:24:24:886:0:0:0,-7.22472,-10 0/0:61.6853:20:20:734:0:0:0,-6.0206,-10 0/0:25.5617:8:8:282:0:0:0,-2.40824,-10 0/0:85.7674:28:28:1060:0:0:0,-8.42884,-10 0/0:43.6235:14:14:519:0:0:0,-4.21442,-10 0/0:31.5823:10:10:357:0:0:0,-3.0103,-10 0/0:64.6956:21:21:754:0:0:0,-6.32163,-10 0/0:61.6853:20:20:748:0:0:0,-6.0206,-10 0/0:43.6235:14:14:527:0:0:0,-4.21442,-10 0/0:73.7265:24:24:909:0:0:0,-7.22472,-10 0/0:31.5823:10:10:372:0:0:0,-3.0103,-10 0/0:22.5514:7:7:264:0:0:0,-2.10721,-10 0/0:34.5926:11:11:418:0:0:0,-3.31133,-10 0/0:16.5308:5:5:158:0:0:0,-1.50515,-10 0/0:40.6132:13:13:485:0:0:0,-3.91339,-10 0/1:99:26:14:531:12:450:-10,0,-10 0/0:91.7872:30:30:1060:0:0:0,-9.0309,-10 0/0:46.6338:15:15:543:0:0:0,-4.51545,-10 0/0:49.6441:16:16:608:0:0:0,-4.81648,-10 0/0:52.6544:17:17:637:0:0:0,-5.11751,-10 0/0:34.5926:11:11:386:0:0:0,-3.31133,-10 0/0:31.5823:10:10:370:0:0:0,-3.0103,-10 0/0:52.6544:17:17:591:0:0:0,-5.11751,-10 0/0:7.49987:2:2:76:0:0:0,-0.60206,-7.22 0/0:37.6029:12:12:454:0:0:0,-3.61236,-10 0/0:64.6956:21:21:784:0:0:0,-6.32163,-10 0/0:22.5514:7:7:257:0:0:0,-2.10721,-10 scaffold_56 4274543 . G A 237.98 . AB=0.434783;ABP=3.86001;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1780;DPB=1780;DPRA=1.62398;EPP=3.20771;EPPR=3.45343;GTI=0;LEN=1;MEANALT=1;MQM=57.5455;MQMR=59.9542;NS=92;NUMALT=1;ODDS=10.0561;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=392;QR=64638;RO=1769;RPP=26.8965;RPPR=3826.99;RUN=1;SAF=6;SAP=3.20771;SAR=5;SRF=892;SRP=3.28649;SRR=877;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.746:9:9:322:0:0:0,-2.70927,-10 0/0:43.6739:2:2:75:0:0:0,-0.60206,-7.125 0/0:67.7563:10:10:364:0:0:0,-3.0103,-10 0/0:76.7872:13:13:471:0:0:0,-3.91339,-10 0/0:58.7254:7:7:254:0:0:0,-2.10721,-10 0/0:67.7563:10:10:374:0:0:0,-3.0103,-10 0/0:99:50:50:1824:0:0:0,-10,-10 0/0:88.8287:17:17:599:0:0:0,-5.11751,-10 0/0:70.7666:11:11:394:0:0:0,-3.31133,-10 0/0:43.6739:2:2:74:0:0:0,-0.60206,-7.03 0/0:49.6945:4:4:130:0:0:0,-1.20412,-10 0/0:55.7151:6:6:197:0:0:0,-1.80618,-10 0/0:94.8503:19:19:694:0:0:0,-5.71957,-10 0/0:99:26:26:975:0:0:0,-7.82678,-10 0/0:99:29:29:1061:0:0:0,-8.72987,-10 0/0:91.8393:18:18:675:0:0:0,-5.41854,-10 0/0:91.8393:18:18:616:0:0:0,-5.41854,-10 0/0:55.7151:6:6:222:0:0:0,-1.80618,-10 0/0:91.8393:18:18:630:0:0:0,-5.41854,-10 0/0:99:45:45:1700:0:0:0,-10,-10 0/0:79.7974:14:14:511:0:0:0,-4.21442,-10 0/0:99:28:28:1046:0:0:0,-8.42884,-10 0/0:55.7151:6:6:222:0:0:0,-1.80618,-10 0/0:94.8503:19:19:720:0:0:0,-5.71957,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:85.8183:16:16:576:0:0:0,-4.81648,-10 0/0:94.8503:19:19:720:0:0:0,-5.71957,-10 0/0:79.7974:14:14:532:0:0:0,-4.21442,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:52.7048:5:5:184:0:0:0,-1.50515,-10 0/0:64.746:9:9:339:0:0:0,-2.70927,-10 0/0:99:24:24:904:0:0:0,-7.22472,-10 0/0:76.7872:13:13:452:0:0:0,-3.91339,-10 0/0:76.7872:13:13:465:0:0:0,-3.91339,-10 0/0:64.746:9:9:297:0:0:0,-2.70927,-10 0/0:82.8077:15:15:568:0:0:0,-4.51545,-10 0/0:99:30:30:1066:0:0:0,-9.0309,-10 0/0:97.8618:20:20:737:0:0:0,-6.0206,-10 0/0:73.7769:12:12:453:0:0:0,-3.61236,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:99:21:21:774:0:0:0,-6.32163,-10 0/0:99:28:28:1043:0:0:0,-8.42884,-10 0/0:99:42:42:1496:0:0:0,-10,-10 0/0:99:21:21:791:0:0:0,-6.32163,-10 0/0:61.7357:8:8:304:0:0:0,-2.40824,-10 0/0:99:61:61:2176:0:0:0,-10,-10 0/0:99:34:34:1219:0:0:0,-10,-10 0/0:61.7357:8:8:297:0:0:0,-2.40824,-10 0/0:99:45:45:1668:0:0:0,-10,-10 0/0:64.746:9:9:340:0:0:0,-2.70927,-10 0/0:99:39:39:1433:0:0:0,-10,-10 0/0:99:25:25:928:0:0:0,-7.52575,-10 0/0:61.7357:8:8:304:0:0:0,-2.40824,-10 0/0:99:41:41:1479:0:0:0,-10,-10 0/0:79.7974:14:14:521:0:0:0,-4.21442,-10 0/0:97.8618:20:20:740:0:0:0,-6.0206,-10 0/0:46.6842:3:3:114:0:0:0,-0.90309,-10 0/0:99:21:21:784:0:0:0,-6.32163,-10 0/0:70.7666:11:11:411:0:0:0,-3.31133,-10 0/0:94.8503:19:19:672:0:0:0,-5.71957,-10 0/0:61.7357:8:8:282:0:0:0,-2.40824,-10 0/0:99:39:38:1365:1:16:0,-8.54911,-10 0/0:91.8393:18:18:652:0:0:0,-5.41854,-10 0/0:76.7872:13:13:482:0:0:0,-3.91339,-10 0/0:99:23:23:838:0:0:0,-6.92369,-10 0/0:88.8287:17:17:626:0:0:0,-5.11751,-10 0/0:99:22:22:830:0:0:0,-6.62266,-10 0/0:99:36:36:1303:0:0:0,-10,-10 0/0:76.7872:13:13:475:0:0:0,-3.91339,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:99:32:32:1162:0:0:0,-9.63296,-10 0/1:99:23:13:469:10:376:-10,0,-10 0/0:70.7666:11:11:414:0:0:0,-3.31133,-10 0/0:99:28:28:991:0:0:0,-8.42884,-10 0/0:94.8503:19:19:644:0:0:0,-5.71957,-10 0/0:64.746:9:9:331:0:0:0,-2.70927,-10 0/0:88.8287:17:17:623:0:0:0,-5.11751,-10 0/0:49.6945:4:4:139:0:0:0,-1.20412,-10 0/0:58.7254:7:7:256:0:0:0,-2.10721,-10 0/0:99:41:41:1494:0:0:0,-10,-10 0/0:99:37:37:1357:0:0:0,-10,-10 0/0:94.8503:19:19:694:0:0:0,-5.71957,-10 0/0:99:21:21:788:0:0:0,-6.32163,-10 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/0:52.7048:5:5:168:0:0:0,-1.50515,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:85.8183:16:16:602:0:0:0,-4.81648,-10 0/0:46.6842:3:3:109:0:0:0,-0.90309,-10 0/0:64.746:9:9:342:0:0:0,-2.70927,-10 0/0:64.746:9:9:334:0:0:0,-2.70927,-10 0/0:76.7872:13:13:469:0:0:0,-3.91339,-10 scaffold_56 4504221 . C T 833.617 . AB=0.596491;ABP=7.61992;AC=3;AF=0.0163043;AN=184;AO=34;CIGAR=1X;DP=1764;DPB=1764;DPRA=0.990627;EPP=4.03217;EPPR=4.06652;GTI=2;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9549;NS=92;NUMALT=1;ODDS=3.03851;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1273;QR=63336;RO=1729;RPP=76.8404;RPPR=3731.47;RUN=1;SAF=15;SAP=4.03217;SAR=19;SRF=853;SRP=3.67468;SRR=876;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.4011:12:12:445:0:0:0,-3.61236,-10 0/0:53.3908:11:11:360:0:0:0,-3.31133,-10 0/0:71.4526:17:17:606:0:0:0,-5.11751,-10 0/0:44.3599:8:8:291:0:0:0,-2.40824,-10 0/0:56.4011:12:12:450:0:0:0,-3.61236,-10 0/0:56.4011:12:12:437:0:0:0,-3.61236,-10 0/1:99:31:22:793:9:329:-10,0,-10 0/0:92.523:24:24:890:0:0:0,-7.22472,-10 0/0:53.3908:11:11:401:0:0:0,-3.31133,-10 0/0:38.3393:6:6:210:0:0:0,-1.80618,-10 0/0:47.3702:9:9:319:0:0:0,-2.70927,-10 0/0:38.3393:6:6:212:0:0:0,-1.80618,-10 0/0:99:32:32:1151:0:0:0,-9.63296,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:99:28:28:993:0:0:0,-8.42884,-10 0/0:89.5136:23:23:833:0:0:0,-6.92369,-10 0/0:68.4423:16:16:557:0:0:0,-4.81648,-10 0/0:35.329:5:5:182:0:0:0,-1.50515,-10 0/0:98.5458:26:26:957:0:0:0,-7.82678,-10 0/0:99:36:36:1326:0:0:0,-10,-10 0/0:71.4526:17:17:629:0:0:0,-5.11751,-10 0/0:99:27:27:1020:0:0:0,-8.12781,-10 0/0:35.329:5:5:190:0:0:0,-1.50515,-10 0/0:68.4423:16:16:603:0:0:0,-4.81648,-10 0/0:99:27:27:932:0:0:0,-8.12781,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:80.4834:20:20:718:0:0:0,-6.0206,-10 0/0:56.4011:12:12:427:0:0:0,-3.61236,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:99:40:40:1472:0:0:0,-10,-10 0/0:29.3084:3:3:109:0:0:0,-0.90309,-10 0/0:47.3702:9:9:319:0:0:0,-2.70927,-10 0/0:80.4834:20:20:736:0:0:0,-6.0206,-10 0/0:56.4011:12:12:446:0:0:0,-3.61236,-10 0/0:71.4526:17:17:621:0:0:0,-5.11751,-10 0/1:0.000386414:8:0:0:8:302:-10,-2.40824,0 0/0:71.4526:17:17:608:0:0:0,-5.11751,-10 0/0:99:28:28:1036:0:0:0,-8.42884,-10 0/0:99:28:28:1022:0:0:0,-8.42884,-10 0/0:77.4731:19:19:720:0:0:0,-5.71957,-10 0/0:99:31:31:1113:0:0:0,-9.33193,-10 0/0:86.5041:22:22:807:0:0:0,-6.62266,-10 0/1:0.202483:18:0:0:17:642:-10,-5.11751,0 0/0:99:27:27:986:0:0:0,-8.12781,-10 0/0:86.5041:22:22:833:0:0:0,-6.62266,-10 0/0:68.4423:16:16:570:0:0:0,-4.81648,-10 0/0:99:35:35:1230:0:0:0,-10,-10 0/0:74.4628:18:18:672:0:0:0,-5.41854,-10 0/0:56.4011:12:12:444:0:0:0,-3.61236,-10 0/0:99:32:32:1169:0:0:0,-9.63296,-10 0/0:59.4114:13:13:480:0:0:0,-3.91339,-10 0/0:99:30:30:1084:0:0:0,-9.0309,-10 0/0:53.3908:11:11:406:0:0:0,-3.31133,-10 0/0:47.3702:9:9:342:0:0:0,-2.70927,-10 0/0:99:32:32:1161:0:0:0,-9.63296,-10 0/0:62.4217:14:14:532:0:0:0,-4.21442,-10 0/0:89.5136:23:23:810:0:0:0,-6.92369,-10 0/0:38.3393:6:6:226:0:0:0,-1.80618,-10 0/0:53.3908:11:11:389:0:0:0,-3.31133,-10 0/0:71.4526:17:17:643:0:0:0,-5.11751,-10 0/0:99:38:38:1410:0:0:0,-10,-10 0/0:80.4834:20:20:743:0:0:0,-6.0206,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:74.4628:18:18:663:0:0:0,-5.41854,-10 0/0:56.4011:12:12:415:0:0:0,-3.61236,-10 0/0:92.523:24:24:905:0:0:0,-7.22472,-10 0/0:80.4834:20:20:731:0:0:0,-6.0206,-10 0/0:53.3908:11:11:417:0:0:0,-3.31133,-10 0/0:99:33:33:1202:0:0:0,-9.93399,-10 0/0:44.3599:8:8:300:0:0:0,-2.40824,-10 0/0:62.4217:14:14:528:0:0:0,-4.21442,-10 0/0:99:32:32:1182:0:0:0,-9.63296,-10 0/0:92.523:24:24:878:0:0:0,-7.22472,-10 0/0:65.432:15:15:563:0:0:0,-4.51545,-10 0/0:99:33:33:1241:0:0:0,-9.93399,-10 0/0:59.4114:13:13:479:0:0:0,-3.91339,-10 0/0:65.432:15:15:562:0:0:0,-4.51545,-10 0/0:68.4423:16:16:605:0:0:0,-4.81648,-10 0/0:35.329:5:5:190:0:0:0,-1.50515,-10 0/0:62.4217:14:14:523:0:0:0,-4.21442,-10 0/0:99:37:37:1361:0:0:0,-10,-10 0/0:89.5136:23:23:828:0:0:0,-6.92369,-10 0/0:99:31:31:1104:0:0:0,-9.33193,-10 0/0:68.4423:16:16:567:0:0:0,-4.81648,-10 0/0:74.4628:18:18:682:0:0:0,-5.41854,-10 0/0:41.3496:7:7:266:0:0:0,-2.10721,-10 0/0:86.5041:22:22:830:0:0:0,-6.62266,-10 0/0:38.3393:6:6:228:0:0:0,-1.80618,-10 0/0:32.3187:4:4:152:0:0:0,-1.20412,-10 0/0:89.5136:23:23:860:0:0:0,-6.92369,-10 0/0:80.4834:20:20:740:0:0:0,-6.0206,-10 0/0:86.5041:22:22:821:0:0:0,-6.62266,-10 scaffold_56 4509010 . G A 3738.87 . AB=0.4875;ABP=3.22745;AC=7;AF=0.0380435;AN=184;AO=139;CIGAR=1X;DP=2563;DPB=2563;DPRA=1.54066;EPP=6.52527;EPPR=3.21194;GTI=1;LEN=1;MEANALT=1;MQM=59.7482;MQMR=59.9538;NS=92;NUMALT=1;ODDS=1.02001;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4991;QR=87561;RO=2423;RPP=304.845;RPPR=5264.49;RUN=1;SAF=77;SAP=6.52527;SAR=62;SRF=1219;SRP=3.21194;SRR=1204;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:88.064:30:30:1079:0:0:0,-9.0309,-10 0/0:82.0432:28:28:1026:0:0:0,-8.42884,-10 0/0:91.073:31:31:1113:0:0:0,-9.33193,-10 0/0:66.9918:23:23:845:0:0:0,-6.92369,-10 0/0:30.8682:11:11:388:0:0:0,-3.31133,-10 0/0:39.8991:14:14:507:0:0:0,-4.21442,-10 0/0:99:53:53:1915:0:0:0,-10,-10 0/0:99:48:48:1756:0:0:0,-10,-10 0/0:54.9506:19:19:690:0:0:0,-5.71957,-10 0/0:24.8476:9:9:320:0:0:0,-2.70927,-10 0/0:36.8888:13:13:459:0:0:0,-3.91339,-10 0/0:33.8785:12:12:421:0:0:0,-3.61236,-10 0/0:99:38:38:1415:0:0:0,-10,-10 0/0:99:51:51:1818:0:0:0,-10,-10 0/0:99:38:38:1339:0:0:0,-10,-10 0/0:99:45:45:1660:0:0:0,-10,-10 0/0:85.0533:29:29:1067:0:0:0,-8.72987,-10 0/0:57.9609:20:20:738:0:0:0,-6.0206,-10 0/1:99:37:24:902:13:485:-10,0,-10 1/1:99:60:0:0:60:2169:-10,-10,0 0/0:82.0432:28:28:1048:0:0:0,-8.42884,-10 0/1:99:46:21:777:25:884:-10,0,-10 0/0:30.8682:11:11:404:0:0:0,-3.31133,-10 0/0:82.0432:28:28:992:0:0:0,-8.42884,-10 0/0:99:39:39:1423:0:0:0,-10,-10 0/0:99:36:36:1292:0:0:0,-10,-10 0/0:82.0432:28:28:1025:0:0:0,-8.42884,-10 0/0:76.0227:26:26:944:0:0:0,-7.82678,-10 0/0:66.9918:23:23:799:0:0:0,-6.92369,-10 0/0:99:53:53:1929:0:0:0,-10,-10 0/0:21.8373:8:8:301:0:0:0,-2.40824,-10 0/1:1.27541:4:4:151:0:0:0,-1.20412,-10 0/0:82.0432:28:28:1019:0:0:0,-8.42884,-10 0/0:45.9197:16:16:593:0:0:0,-4.81648,-10 0/0:82.0432:28:28:1034:0:0:0,-8.42884,-10 0/0:45.9197:16:16:597:0:0:0,-4.81648,-10 0/0:39.8991:14:14:488:0:0:0,-4.21442,-10 0/1:99:44:23:853:21:760:-10,0,-10 0/0:57.9609:20:20:716:0:0:0,-6.0206,-10 0/0:70.0021:24:24:899:0:0:0,-7.22472,-10 0/0:97.095:33:33:1180:0:0:0,-9.93399,-10 0/0:73.0124:25:25:879:0:0:0,-7.52575,-10 0/0:82.0432:28:28:970:0:0:0,-8.42884,-10 0/0:85.0533:29:29:1067:0:0:0,-8.72987,-10 0/0:94.0821:32:32:1161:0:0:0,-9.63296,-10 0/0:57.9609:20:20:750:0:0:0,-6.0206,-10 0/0:99:48:48:1737:0:0:0,-10,-10 0/0:99:39:39:1415:0:0:0,-10,-10 0/0:45.9197:16:16:573:0:0:0,-4.81648,-10 0/0:99:44:44:1611:0:0:0,-10,-10 0/0:70.0021:24:24:902:0:0:0,-7.22472,-10 0/0:99:52:52:1813:0:0:0,-10,-10 0/0:79.033:27:27:979:0:0:0,-8.12781,-10 0/0:24.8476:9:9:313:0:0:0,-2.70927,-10 0/0:99:63:63:2260:0:0:0,-10,-10 0/0:33.8785:12:12:431:0:0:0,-3.61236,-10 0/0:99:36:36:1275:0:0:0,-10,-10 0/0:39.8991:14:14:531:0:0:0,-4.21442,-10 0/0:70.0021:24:24:870:0:0:0,-7.22472,-10 0/0:24.8476:9:9:285:0:0:0,-2.70927,-10 0/0:99:34:34:1219:0:0:0,-10,-10 0/0:57.9609:20:20:720:0:0:0,-6.0206,-10 0/0:99:51:51:1855:0:0:0,-10,-10 0/0:73.0124:25:25:906:0:0:0,-7.52575,-10 0/0:54.9506:19:19:717:0:0:0,-5.71957,-10 0/0:99:38:38:1390:0:0:0,-10,-10 0/1:99:33:14:497:19:677:-10,0,-10 0/0:45.9197:16:16:575:0:0:0,-4.81648,-10 0/0:99:47:47:1684:0:0:0,-10,-10 0/0:42.9094:15:15:547:0:0:0,-4.51545,-10 0/0:73.0124:25:25:912:0:0:0,-7.52575,-10 0/0:91.073:31:31:1143:0:0:0,-9.33193,-10 0/0:85.0533:29:29:1087:0:0:0,-8.72987,-10 0/0:60.9712:21:21:772:0:0:0,-6.32163,-10 0/0:99:45:45:1574:0:0:0,-10,-10 0/0:63.9815:22:22:768:0:0:0,-6.62266,-10 0/0:63.1407:31:30:1002:1:16:0,-6.24057,-10 0/0:79.033:27:27:924:0:0:0,-8.12781,-10 0/0:21.8373:8:8:258:0:0:0,-2.40824,-10 0/0:66.9918:23:23:817:0:0:0,-6.92369,-10 0/0:99:44:44:1617:0:0:0,-10,-10 0/0:99:36:36:1259:0:0:0,-10,-10 0/0:82.0432:29:28:1031:0:0:0,-8.42884,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:79.033:27:27:954:0:0:0,-8.12781,-10 0/0:18.827:7:7:266:0:0:0,-2.10721,-10 0/0:70.0021:24:24:902:0:0:0,-7.22472,-10 0/0:51.9403:18:18:644:0:0:0,-5.41854,-10 0/0:33.8785:12:12:411:0:0:0,-3.61236,-10 0/0:70.0021:24:24:876:0:0:0,-7.22472,-10 0/0:36.8888:13:13:473:0:0:0,-3.91339,-10 0/0:54.9506:19:19:667:0:0:0,-5.71957,-10 scaffold_56 4586651 . T C 1682.02 . AB=0.528736;ABP=3.63429;AC=7;AF=0.0380435;AN=184;AO=65;CIGAR=1X;DP=1310;DPB=1310;DPRA=1.2619;EPP=3.04371;EPPR=3.51599;GTI=1;LEN=1;MEANALT=1;MQM=59.6923;MQMR=59.9202;NS=92;NUMALT=1;ODDS=2.57229;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2384;QR=45729;RO=1241;RPP=135.604;RPPR=2603.11;RUN=1;SAF=31;SAP=3.31097;SAR=34;SRF=601;SRP=5.67171;SRR=640;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.3511:13:13:480:0:0:0,-3.91339,-10 0/0:55.3717:15:15:541:0:0:0,-4.51545,-10 0/0:55.3717:15:15:569:0:0:0,-4.51545,-10 0/0:19.2481:3:3:114:0:0:0,-0.90309,-10 0/0:43.3305:11:11:418:0:0:0,-3.31133,-10 0/0:25.2687:5:5:190:0:0:0,-1.50515,-10 0/1:99:23:14:528:9:340:-10,0,-10 0/0:73.4335:21:21:756:0:0:0,-6.32163,-10 0/0:52.3614:14:14:513:0:0:0,-4.21442,-10 0/0:19.2481:3:3:111:0:0:0,-0.90309,-10 0/0:40.3202:10:10:357:0:0:0,-3.0103,-10 0/0:22.2584:4:4:152:0:0:0,-1.20412,-10 0/1:99:24:11:409:13:467:-10,0,-10 0/0:82.4643:24:24:890:0:0:0,-7.22472,-10 0/1:99:25:14:514:11:413:-10,0,-10 0/0:91.4955:27:27:957:0:0:0,-8.12781,-10 0/0:70.4232:20:20:758:0:0:0,-6.0206,-10 0/0:34.2996:8:8:267:0:0:0,-2.40824,-10 0/0:58.382:16:16:586:0:0:0,-4.81648,-10 0/0:52.3614:14:14:493:0:0:0,-4.21442,-10 0/0:55.3717:15:15:563:0:0:0,-4.51545,-10 0/0:64.4026:18:18:643:0:0:0,-5.41854,-10 0/0:28.279:6:6:214:0:0:0,-1.80618,-10 0/0:46.3408:12:12:454:0:0:0,-3.61236,-10 0/0:46.3408:12:12:452:0:0:0,-3.61236,-10 0/0:43.3305:12:11:418:0:0:0,-3.31133,-10 0/0:49.3511:13:13:476:0:0:0,-3.91339,-10 0/0:46.3408:12:12:436:0:0:0,-3.61236,-10 0/0:58.382:16:16:554:0:0:0,-4.81648,-10 0/0:79.4541:23:23:856:0:0:0,-6.92369,-10 0/0:31.2893:7:7:242:0:0:0,-2.10721,-10 0/0:28.279:6:6:226:0:0:0,-1.80618,-10 0/0:46.3408:12:12:425:0:0:0,-3.61236,-10 0/0:25.2687:5:5:163:0:0:0,-1.50515,-10 0/0:82.4643:24:24:907:0:0:0,-7.22472,-10 0/0:22.2584:4:4:152:0:0:0,-1.20412,-10 0/0:28.279:6:6:196:0:0:0,-1.80618,-10 0/0:70.4232:20:20:759:0:0:0,-6.0206,-10 0/0:34.2996:8:8:301:0:0:0,-2.40824,-10 0/0:34.2996:8:8:293:0:0:0,-2.40824,-10 0/0:76.4438:22:22:826:0:0:0,-6.62266,-10 0/0:40.3202:10:10:380:0:0:0,-3.0103,-10 1/1:16.1227:19:0:0:19:670:-10,-5.71957,0 0/0:76.4438:22:22:814:0:0:0,-6.62266,-10 0/0:67.4129:19:19:715:0:0:0,-5.71957,-10 0/0:61.3923:17:17:619:0:0:0,-5.11751,-10 0/0:79.4541:23:23:825:0:0:0,-6.92369,-10 0/0:52.3614:14:14:526:0:0:0,-4.21442,-10 0/0:34.2996:8:8:300:0:0:0,-2.40824,-10 0/0:88.4851:26:26:941:0:0:0,-7.82678,-10 0/0:31.2893:7:7:265:0:0:0,-2.10721,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:28.279:6:6:204:0:0:0,-1.80618,-10 0/0:25.2687:5:5:190:0:0:0,-1.50515,-10 0/0:97.5139:29:29:1004:0:0:0,-8.72987,-10 0/0:52.3614:14:14:517:0:0:0,-4.21442,-10 0/0:61.3923:17:17:641:0:0:0,-5.11751,-10 0/0:61.3923:17:17:644:0:0:0,-5.11751,-10 0/0:46.3408:12:12:445:0:0:0,-3.61236,-10 0/0:31.2893:7:7:266:0:0:0,-2.10721,-10 0/0:64.4026:18:18:660:0:0:0,-5.41854,-10 0/0:52.3614:14:14:528:0:0:0,-4.21442,-10 0/0:85.4746:25:25:920:0:0:0,-7.52575,-10 0/0:58.382:16:16:573:0:0:0,-4.81648,-10 0/0:22.2584:4:4:152:0:0:0,-1.20412,-10 0/0:58.382:16:16:581:0:0:0,-4.81648,-10 0/0:61.3923:17:17:620:0:0:0,-5.11751,-10 0/0:40.3202:10:10:366:0:0:0,-3.0103,-10 0/0:55.3717:15:15:570:0:0:0,-4.51545,-10 0/0:28.279:6:6:225:0:0:0,-1.80618,-10 0/0:49.3511:13:13:491:0:0:0,-3.91339,-10 0/0:76.4438:23:22:787:0:0:0,-6.62266,-10 0/0:46.3408:12:12:456:0:0:0,-3.61236,-10 0/0:46.3408:12:12:450:0:0:0,-3.61236,-10 0/0:64.4026:18:18:667:0:0:0,-5.41854,-10 0/0:46.3408:12:12:455:0:0:0,-3.61236,-10 0/0:31.2893:7:7:256:0:0:0,-2.10721,-10 0/1:0.290052:9:0:0:9:342:-10,-2.70927,0 0/0:28.279:6:6:228:0:0:0,-1.80618,-10 0/0:37.3099:9:9:316:0:0:0,-2.70927,-10 0/0:99:31:31:1171:0:0:0,-9.33193,-10 0/0:73.4335:21:21:794:0:0:0,-6.32163,-10 0/0:67.4129:19:19:714:0:0:0,-5.71957,-10 0/0:52.3614:15:14:530:0:0:0,-4.21442,-10 0/0:64.4026:18:18:668:0:0:0,-5.41854,-10 0/0:40.3202:10:10:371:0:0:0,-3.0103,-10 0/0:55.3717:15:15:536:0:0:0,-4.51545,-10 0/0:58.382:16:16:602:0:0:0,-4.81648,-10 0/1:98.4491:6:2:76:4:152:-10,0,-6.58991 0/0:43.3305:12:11:409:0:0:0,-3.31133,-10 0/0:55.3717:15:15:565:0:0:0,-4.51545,-10 0/0:46.3408:12:12:449:0:0:0,-3.61236,-10 scaffold_56 4586655 . A G 235.527 . AB=0.611111;ABP=4.9405;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1310;DPB=1310;DPRA=1.2678;EPP=7.94546;EPPR=4.41616;GTI=0;LEN=1;MEANALT=1;MQM=59.8182;MQMR=59.893;NS=92;NUMALT=1;ODDS=7.48076;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=391;QR=48138;RO=1299;RPP=26.8965;RPPR=2737.56;RUN=1;SAF=8;SAP=7.94546;SAR=3;SRF=625;SRP=7.02393;SRR=674;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.6052:13:13:492:0:0:0,-3.91339,-10 0/0:68.6258:15:15:561:0:0:0,-4.51545,-10 0/0:68.6258:15:15:568:0:0:0,-4.51545,-10 0/0:32.5022:3:3:114:0:0:0,-0.90309,-10 0/0:56.5846:11:11:418:0:0:0,-3.31133,-10 0/0:38.5228:5:5:190:0:0:0,-1.50515,-10 0/0:92.7083:23:23:872:0:0:0,-6.92369,-10 0/0:86.6874:21:21:742:0:0:0,-6.32163,-10 0/0:65.6155:14:14:519:0:0:0,-4.21442,-10 0/0:32.5022:3:3:114:0:0:0,-0.90309,-10 0/0:53.5743:10:10:379:0:0:0,-3.0103,-10 0/0:35.5125:4:4:152:0:0:0,-1.20412,-10 0/0:95.7169:24:24:893:0:0:0,-7.22472,-10 0/0:95.7169:24:24:898:0:0:0,-7.22472,-10 0/0:98.7292:25:25:936:0:0:0,-7.52575,-10 0/0:99:27:27:1020:0:0:0,-8.12781,-10 0/0:83.6773:20:20:745:0:0:0,-6.0206,-10 0/0:47.5537:8:8:300:0:0:0,-2.40824,-10 0/0:71.6361:16:16:608:0:0:0,-4.81648,-10 0/0:65.6155:14:14:509:0:0:0,-4.21442,-10 0/0:68.6258:15:15:567:0:0:0,-4.51545,-10 0/0:77.6567:18:18:670:0:0:0,-5.41854,-10 0/0:41.5331:6:6:211:0:0:0,-1.80618,-10 0/0:59.5949:12:12:456:0:0:0,-3.61236,-10 0/0:59.5949:12:12:444:0:0:0,-3.61236,-10 0/0:59.5949:12:12:440:0:0:0,-3.61236,-10 0/0:62.6052:13:13:468:0:0:0,-3.91339,-10 0/0:59.5949:12:12:403:0:0:0,-3.61236,-10 0/0:71.6361:16:16:577:0:0:0,-4.81648,-10 0/0:92.7083:23:23:862:0:0:0,-6.92369,-10 0/0:44.5434:7:7:244:0:0:0,-2.10721,-10 0/0:41.5331:6:6:224:0:0:0,-1.80618,-10 0/0:59.5949:12:12:426:0:0:0,-3.61236,-10 0/0:38.5228:5:5:180:0:0:0,-1.50515,-10 0/0:95.7169:24:24:910:0:0:0,-7.22472,-10 0/0:35.5125:4:4:141:0:0:0,-1.20412,-10 0/0:41.5331:6:6:196:0:0:0,-1.80618,-10 0/0:83.6773:20:20:736:0:0:0,-6.0206,-10 0/0:47.5537:8:8:300:0:0:0,-2.40824,-10 0/0:47.5537:8:8:284:0:0:0,-2.40824,-10 0/0:89.698:22:22:833:0:0:0,-6.62266,-10 0/0:53.5743:10:10:380:0:0:0,-3.0103,-10 0/0:80.667:19:19:716:0:0:0,-5.71957,-10 0/0:89.698:22:22:817:0:0:0,-6.62266,-10 0/0:80.667:19:19:691:0:0:0,-5.71957,-10 0/0:74.6464:17:17:638:0:0:0,-5.11751,-10 0/0:92.7083:23:23:826:0:0:0,-6.92369,-10 0/0:65.6155:14:14:532:0:0:0,-4.21442,-10 0/0:47.5537:8:8:289:0:0:0,-2.40824,-10 0/0:99:26:26:963:0:0:0,-7.82678,-10 0/0:44.5434:7:7:258:0:0:0,-2.10721,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:41.5331:6:6:206:0:0:0,-1.80618,-10 0/0:38.5228:5:5:189:0:0:0,-1.50515,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:65.6155:14:14:521:0:0:0,-4.21442,-10 0/0:74.6464:17:17:637:0:0:0,-5.11751,-10 0/0:74.6464:17:17:636:0:0:0,-5.11751,-10 0/0:59.5949:12:12:455:0:0:0,-3.61236,-10 0/0:44.5434:7:7:262:0:0:0,-2.10721,-10 0/0:77.6567:18:18:671:0:0:0,-5.41854,-10 0/0:65.6155:14:14:507:0:0:0,-4.21442,-10 0/0:98.7292:25:25:897:0:0:0,-7.52575,-10 0/0:71.6361:16:16:603:0:0:0,-4.81648,-10 0/0:35.5125:4:4:152:0:0:0,-1.20412,-10 0/0:71.6361:16:16:608:0:0:0,-4.81648,-10 0/0:74.6464:17:17:600:0:0:0,-5.11751,-10 0/0:53.5743:10:10:367:0:0:0,-3.0103,-10 0/0:68.6258:15:15:568:0:0:0,-4.51545,-10 0/0:41.5331:6:6:227:0:0:0,-1.80618,-10 0/0:62.6052:13:13:494:0:0:0,-3.91339,-10 0/0:92.7083:23:23:842:0:0:0,-6.92369,-10 0/0:59.5949:12:12:452:0:0:0,-3.61236,-10 0/0:59.5949:12:12:453:0:0:0,-3.61236,-10 0/0:77.6567:18:18:679:0:0:0,-5.41854,-10 0/0:59.5949:12:12:446:0:0:0,-3.61236,-10 0/0:44.5434:7:7:266:0:0:0,-2.10721,-10 0/0:50.564:9:9:320:0:0:0,-2.70927,-10 0/0:41.5331:6:6:226:0:0:0,-1.80618,-10 0/0:50.564:9:9:342:0:0:0,-2.70927,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:86.6874:21:21:785:0:0:0,-6.32163,-10 0/0:80.667:19:19:707:0:0:0,-5.71957,-10 0/0:68.6258:15:15:570:0:0:0,-4.51545,-10 0/1:99:18:7:266:11:391:-10,0,-10 0/0:53.5743:10:10:379:0:0:0,-3.0103,-10 0/0:68.6258:15:15:537:0:0:0,-4.51545,-10 0/0:71.6361:16:16:608:0:0:0,-4.81648,-10 0/0:41.5331:6:6:228:0:0:0,-1.80618,-10 0/0:59.5949:12:12:423:0:0:0,-3.61236,-10 0/0:68.6258:15:15:524:0:0:0,-4.51545,-10 0/0:59.5949:12:12:433:0:0:0,-3.61236,-10 scaffold_56 4605967 . G T 263.807 . AB=0.8;ABP=14.7363;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1220;DPB=1220;DPRA=0.979899;EPP=4.51363;EPPR=8.26073;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8872;NS=92;NUMALT=1;ODDS=4.89173;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=448;QR=43705;RO=1206;RPP=31.2394;RPPR=2621.81;RUN=1;SAF=8;SAP=4.51363;SAR=5;SRF=630;SRP=8.26073;SRR=576;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:66.4836:16:16:582:0:0:0,-4.81648,-10 0/0:45.4115:9:9:342:0:0:0,-2.70927,-10 0/0:81.5351:21:21:740:0:0:0,-6.32163,-10 0/0:33.3703:5:5:190:0:0:0,-1.50515,-10 0/0:42.4012:8:8:298:0:0:0,-2.40824,-10 0/0:36.3806:6:6:226:0:0:0,-1.80618,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:48.4218:10:10:374:0:0:0,-3.0103,-10 0/0:45.4115:9:9:332:0:0:0,-2.70927,-10 0/0:24.3394:2:2:76:0:0:0,-0.60206,-7.22 0/0:21.3291:1:1:38:0:0:0,-0.30103,-3.8 0/0:36.3806:6:6:222:0:0:0,-1.80618,-10 0/0:96.5856:26:26:962:0:0:0,-7.82678,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:99:27:27:932:0:0:0,-8.12781,-10 0/0:69.4939:17:17:634:0:0:0,-5.11751,-10 0/0:42.4012:8:8:262:0:0:0,-2.40824,-10 0/0:42.4012:8:8:279:0:0:0,-2.40824,-10 0/0:75.5145:19:19:667:0:0:0,-5.71957,-10 0/0:99:28:28:1023:0:0:0,-8.42884,-10 0/0:51.4321:11:11:405:0:0:0,-3.31133,-10 0/0:84.5454:22:22:798:0:0:0,-6.62266,-10 0/0:48.4218:10:10:350:0:0:0,-3.0103,-10 0/0:51.4321:11:11:414:0:0:0,-3.31133,-10 0/0:42.4012:8:8:303:0:0:0,-2.40824,-10 0/0:69.4939:17:17:617:0:0:0,-5.11751,-10 0/0:45.4115:9:9:301:0:0:0,-2.70927,-10 0/0:42.4012:8:8:292:0:0:0,-2.40824,-10 0/0:69.4939:17:17:639:0:0:0,-5.11751,-10 0/0:48.4218:10:10:325:0:0:0,-3.0103,-10 0/0:30.36:4:4:150:0:0:0,-1.20412,-10 0/0:51.4321:11:11:366:0:0:0,-3.31133,-10 0/0:63.4733:15:15:559:0:0:0,-4.51545,-10 0/0:48.4218:10:10:334:0:0:0,-3.0103,-10 0/0:60.463:14:14:517:0:0:0,-4.21442,-10 0/0:45.4115:9:9:318:0:0:0,-2.70927,-10 0/0:42.4012:8:8:302:0:0:0,-2.40824,-10 0/0:81.5351:22:21:737:0:0:0,-6.32163,-10 0/0:54.4424:12:12:428:0:0:0,-3.61236,-10 0/0:57.4527:13:13:459:0:0:0,-3.91339,-10 0/0:84.5454:22:22:771:0:0:0,-6.62266,-10 0/0:48.4218:10:10:378:0:0:0,-3.0103,-10 0/0:57.4527:13:13:462:0:0:0,-3.91339,-10 0/0:60.463:14:14:489:0:0:0,-4.21442,-10 0/0:57.4527:13:13:466:0:0:0,-3.91339,-10 0/0:48.4218:10:10:333:0:0:0,-3.0103,-10 0/0:99:37:37:1327:0:0:0,-10,-10 0/0:81.5351:21:21:776:0:0:0,-6.32163,-10 0/0:51.4321:11:11:382:0:0:0,-3.31133,-10 0/0:87.5556:23:23:811:0:0:0,-6.92369,-10 0/0:42.4012:8:8:278:0:0:0,-2.40824,-10 0/0:78.5248:20:20:707:0:0:0,-6.0206,-10 0/0:60.463:14:14:525:0:0:0,-4.21442,-10 0/0:39.3909:7:7:264:0:0:0,-2.10721,-10 0/0:99:29:29:1080:0:0:0,-8.72987,-10 0/0:42.4012:8:8:299:0:0:0,-2.40824,-10 0/0:75.5145:19:19:716:0:0:0,-5.71957,-10 0/0:42.4012:8:8:295:0:0:0,-2.40824,-10 0/0:54.4424:12:12:423:0:0:0,-3.61236,-10 0/0:42.4012:8:8:304:0:0:0,-2.40824,-10 0/0:66.4836:16:16:595:0:0:0,-4.81648,-10 0/0:57.4527:13:13:466:0:0:0,-3.91339,-10 0/0:81.5351:21:21:772:0:0:0,-6.32163,-10 0/0:51.4321:11:11:403:0:0:0,-3.31133,-10 0/0:54.4424:12:12:449:0:0:0,-3.61236,-10 0/0:75.5145:19:19:689:0:0:0,-5.71957,-10 0/0:60.463:14:14:530:0:0:0,-4.21442,-10 0/0:33.3703:5:5:188:0:0:0,-1.50515,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/0:36.3806:6:6:193:0:0:0,-1.80618,-10 0/0:57.4527:13:13:477:0:0:0,-3.91339,-10 0/0:45.4115:9:9:336:0:0:0,-2.70927,-10 0/1:99:15:3:112:12:432:-10,0,-8.59589 0/0:57.4527:13:13:478:0:0:0,-3.91339,-10 0/0:81.5351:21:21:760:0:0:0,-6.32163,-10 0/0:36.3806:6:6:227:0:0:0,-1.80618,-10 0/0:54.4424:12:12:451:0:0:0,-3.61236,-10 0/0:39.3909:7:7:261:0:0:0,-2.10721,-10 0/0:33.3703:5:5:183:0:0:0,-1.50515,-10 0/0:48.4218:10:10:362:0:0:0,-3.0103,-10 0/0:72.5042:18:18:653:0:0:0,-5.41854,-10 0/0:72.5042:18:18:624:0:0:0,-5.41854,-10 0/0:29.7493:11:10:380:1:16:0,-0.669937,-10 0/0:51.4321:11:11:381:0:0:0,-3.31133,-10 0/0:60.463:14:14:517:0:0:0,-4.21442,-10 0/0:30.36:4:4:152:0:0:0,-1.20412,-10 0/0:51.4321:11:11:415:0:0:0,-3.31133,-10 0/0:51.4321:11:11:380:0:0:0,-3.31133,-10 0/0:27.3497:3:3:104:0:0:0,-0.90309,-9.70667 0/0:66.4836:16:16:593:0:0:0,-4.81648,-10 0/0:48.4218:10:10:376:0:0:0,-3.0103,-10 0/0:42.4012:8:8:297:0:0:0,-2.40824,-10 scaffold_67 71115 . A C 5075.92 . AB=0.573913;ABP=8.4673;AC=19;AF=0.103261;AN=184;AO=188;CIGAR=1X;DP=1597;DPB=1597;DPRA=1.01937;EPP=3.0565;EPPR=3.82672;GTI=2;LEN=1;MEANALT=1;MQM=59.8989;MQMR=59.9282;NS=92;NUMALT=1;ODDS=0.515967;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6903;QR=51794;RO=1407;RPP=411.247;RPPR=3058.27;RUN=1;SAF=95;SAP=3.0565;SAR=93;SRF=715;SRP=3.82672;SRR=692;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.7378:15:15:568:0:0:0,-4.51545,-10 0/0:16.6245:4:4:139:0:0:0,-1.20412,-10 0/0:82.8509:26:26:948:0:0:0,-7.82678,-10 0/0:34.6863:10:10:376:0:0:0,-3.0103,-10 0/1:99:13:6:225:7:242:-10,0,-10 0/0:16.6245:4:4:152:0:0:0,-1.20412,-10 1/1:65.2579:30:0:0:30:1090:-10,-9.0309,0 0/0:79.8407:25:25:914:0:0:0,-7.52575,-10 0/0:52.7481:16:16:577:0:0:0,-4.81648,-10 0/0:10.6039:2:2:76:0:0:0,-0.60206,-7.22 0/0:19.6348:5:5:190:0:0:0,-1.50515,-10 0/0:19.6348:5:5:189:0:0:0,-1.50515,-10 0/0:64.7892:20:20:751:0:0:0,-6.0206,-10 0/0:91.8808:29:29:1052:0:0:0,-8.72987,-10 0/0:94.89:30:30:1112:0:0:0,-9.0309,-10 0/0:79.8407:25:25:914:0:0:0,-7.52575,-10 0/1:99:25:13:446:12:450:-10,0,-10 0/1:0.101648:8:0:0:8:292:-10,-2.40824,0 0/0:64.7892:20:20:729:0:0:0,-6.0206,-10 0/0:97.9042:31:31:1166:0:0:0,-9.33193,-10 0/0:55.7584:17:17:632:0:0:0,-5.11751,-10 0/0:70.8099:22:22:819:0:0:0,-6.62266,-10 0/0:19.6348:5:5:190:0:0:0,-1.50515,-10 0/1:99:16:10:379:6:225:-10,0,-10 0/0:76.8304:24:24:872:0:0:0,-7.22472,-10 0/0:58.7687:18:18:674:0:0:0,-5.41854,-10 0/0:46.7275:14:14:499:0:0:0,-4.21442,-10 0/0:22.6451:6:6:228:0:0:0,-1.80618,-10 0/0:58.7687:18:18:679:0:0:0,-5.41854,-10 0/0:99:36:36:1253:0:0:0,-10,-10 0/0:16.6245:4:4:146:0:0:0,-1.20412,-10 0/0:31.676:9:9:342:0:0:0,-2.70927,-10 0/0:85.8611:27:27:1022:0:0:0,-8.12781,-10 0/0:25.6554:7:7:265:0:0:0,-2.10721,-10 0/0:52.7481:16:16:574:0:0:0,-4.81648,-10 0/0:19.6348:5:5:176:0:0:0,-1.50515,-10 0/0:55.7584:17:17:598:0:0:0,-5.11751,-10 0/0:79.8407:25:25:942:0:0:0,-7.52575,-10 0/0:46.7275:14:14:510:0:0:0,-4.21442,-10 0/0:31.676:9:9:320:0:0:0,-2.70927,-10 0/0:79.8407:25:25:946:0:0:0,-7.52575,-10 0/0:58.7687:18:18:670:0:0:0,-5.41854,-10 0/0:25.6554:7:7:262:0:0:0,-2.10721,-10 0/0:82.8509:26:26:967:0:0:0,-7.82678,-10 0/0:85.8611:27:27:994:0:0:0,-8.12781,-10 0/0:40.7069:12:12:436:0:0:0,-3.61236,-10 0/0:99:58:58:2189:0:0:0,-10,-10 0/0:79.8407:25:25:935:0:0:0,-7.52575,-10 0/0:28.6657:8:8:299:0:0:0,-2.40824,-10 0/0:99:45:45:1650:0:0:0,-10,-10 0/0:49.7378:15:15:559:0:0:0,-4.51545,-10 0/0:91.8808:29:29:1018:0:0:0,-8.72987,-10 0/0:40.7069:12:12:424:0:0:0,-3.61236,-10 0/0:25.6554:7:7:265:0:0:0,-2.10721,-10 0/0:99:45:44:1619:0:0:0,-10,-10 0/0:40.7069:12:12:447:0:0:0,-3.61236,-10 0/1:99:17:10:371:7:259:-10,0,-10 0/0:37.6966:11:11:384:0:0:0,-3.31133,-10 0/0:70.8099:22:22:810:0:0:0,-6.62266,-10 0/0:25.6554:7:7:262:0:0:0,-2.10721,-10 1/1:32.1446:19:0:0:19:710:-10,-5.71957,0 0/0:52.7481:16:16:598:0:0:0,-4.81648,-10 0/0:99:36:36:1346:0:0:0,-10,-10 1/1:26.124:17:0:0:17:634:-10,-5.11751,0 0/0:25.6554:7:7:231:0:0:0,-2.10721,-10 0/0:61.7789:19:19:698:0:0:0,-5.71957,-10 0/0:52.7481:16:16:597:0:0:0,-4.81648,-10 0/1:0.888791:11:0:0:11:418:-10,-3.31133,0 0/1:99:25:10:372:15:556:-10,0,-10 1/1:8.06221:11:0:0:11:411:-10,-3.31133,0 0/0:34.6863:10:10:320:0:0:0,-3.0103,-10 0/0:61.7789:19:19:718:0:0:0,-5.71957,-10 0/0:99:36:36:1293:0:0:0,-10,-10 0/0:49.7378:15:15:548:0:0:0,-4.51545,-10 0/0:99:33:33:1233:0:0:0,-9.93399,-10 1/1:14.0828:13:0:0:13:459:-10,-3.91339,0 0/0:31.676:9:9:310:0:0:0,-2.70927,-10 0/0:43.7172:13:13:481:0:0:0,-3.91339,-10 0/0:22.6451:6:6:227:0:0:0,-1.80618,-10 0/0:31.676:9:9:342:0:0:0,-2.70927,-10 0/0:97.9042:31:31:1147:0:0:0,-9.33193,-10 0/0:73.8201:23:23:834:0:0:0,-6.92369,-10 0/0:55.7584:17:17:619:0:0:0,-5.11751,-10 0/0:52.7481:16:16:608:0:0:0,-4.81648,-10 1/1:68.2682:31:0:0:31:1142:-10,-9.33193,0 0/0:25.6554:7:7:253:0:0:0,-2.10721,-10 0/0:28.6657:8:8:282:0:0:0,-2.40824,-10 0/0:28.6657:8:8:303:0:0:0,-2.40824,-10 0/0:16.6245:4:4:150:0:0:0,-1.20412,-10 0/0:25.6554:8:7:265:0:0:0,-2.10721,-10 0/0:15.5519:11:10:376:1:15:0,-0.769937,-10 0/0:43.7172:13:13:492:0:0:0,-3.91339,-10 scaffold_67 71116 . C G 280.104 . AB=0.361111;ABP=9.04217;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1600;DPB=1600;DPRA=2.09463;EPP=11.1951;EPPR=3.24183;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9243;NS=92;NUMALT=1;ODDS=6.96845;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=462;QR=58450;RO=1585;RPP=31.2394;RPPR=3444.79;RUN=1;SAF=10;SAP=11.1951;SAR=3;SRF=799;SRP=3.24183;SRR=786;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.4095:15:15:565:0:0:0,-4.51545,-10 0/0:36.2962:4:4:127:0:0:0,-1.20412,-10 0/0:99:26:26:950:0:0:0,-7.82678,-10 0/0:54.358:10:10:354:0:0:0,-3.0103,-10 0/0:63.3889:13:13:454:0:0:0,-3.91339,-10 0/0:36.2962:4:4:152:0:0:0,-1.20412,-10 0/0:99:30:30:1067:0:0:0,-9.0309,-10 0/0:99:25:25:902:0:0:0,-7.52575,-10 0/0:72.4198:16:16:578:0:0:0,-4.81648,-10 0/0:30.2756:2:2:76:0:0:0,-0.60206,-7.22 0/0:39.3065:5:5:190:0:0:0,-1.50515,-10 0/0:39.3065:5:5:190:0:0:0,-1.50515,-10 0/0:84.461:20:20:753:0:0:0,-6.0206,-10 0/0:99:29:29:1073:0:0:0,-8.72987,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:99:25:25:908:0:0:0,-7.52575,-10 0/0:99:25:25:879:0:0:0,-7.52575,-10 0/0:48.3374:8:8:295:0:0:0,-2.40824,-10 0/0:84.461:20:20:719:0:0:0,-6.0206,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:75.4301:17:17:631:0:0:0,-5.11751,-10 0/0:93.4894:23:23:842:0:0:0,-6.92369,-10 0/0:39.3065:5:5:190:0:0:0,-1.50515,-10 0/0:72.4198:16:16:595:0:0:0,-4.81648,-10 0/0:96.4971:24:24:879:0:0:0,-7.22472,-10 0/0:78.4403:18:18:684:0:0:0,-5.41854,-10 0/0:66.3992:14:14:501:0:0:0,-4.21442,-10 0/0:42.3168:6:6:225:0:0:0,-1.80618,-10 0/0:78.4403:18:18:669:0:0:0,-5.41854,-10 0/1:99:36:23:822:13:462:-10,0,-10 0/0:36.2962:4:4:149:0:0:0,-1.20412,-10 0/0:51.3477:9:9:342:0:0:0,-2.70927,-10 0/0:99:27:27:1014:0:0:0,-8.12781,-10 0/0:45.3271:7:7:263:0:0:0,-2.10721,-10 0/0:75.4301:17:17:593:0:0:0,-5.11751,-10 0/0:39.3065:5:5:165:0:0:0,-1.50515,-10 0/0:75.4301:17:17:612:0:0:0,-5.11751,-10 0/0:99:25:25:946:0:0:0,-7.52575,-10 0/0:66.3992:14:14:519:0:0:0,-4.21442,-10 0/0:51.3477:9:9:335:0:0:0,-2.70927,-10 0/0:99:25:25:946:0:0:0,-7.52575,-10 0/0:78.4403:18:18:672:0:0:0,-5.41854,-10 0/0:45.3271:7:7:250:0:0:0,-2.10721,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:99:27:27:998:0:0:0,-8.12781,-10 0/0:60.3786:12:12:450:0:0:0,-3.61236,-10 0/0:99:58:58:2164:0:0:0,-10,-10 0/0:99:25:25:942:0:0:0,-7.52575,-10 0/0:48.3374:8:8:290:0:0:0,-2.40824,-10 0/0:99:45:45:1664:0:0:0,-10,-10 0/0:69.4095:15:15:569:0:0:0,-4.51545,-10 0/0:99:29:29:1027:0:0:0,-8.72987,-10 0/0:60.3786:12:12:398:0:0:0,-3.61236,-10 0/0:45.3271:7:7:240:0:0:0,-2.10721,-10 0/0:99:45:45:1674:0:0:0,-10,-10 0/0:60.3786:12:12:456:0:0:0,-3.61236,-10 0/0:75.4301:17:17:617:0:0:0,-5.11751,-10 0/0:54.358:11:10:373:0:0:0,-3.0103,-10 0/0:90.4814:22:22:822:0:0:0,-6.62266,-10 0/0:45.3271:7:7:264:0:0:0,-2.10721,-10 0/0:81.4506:19:19:711:0:0:0,-5.71957,-10 0/0:75.4301:17:17:637:0:0:0,-5.11751,-10 0/0:99:36:36:1333:0:0:0,-10,-10 0/0:75.4301:17:17:634:0:0:0,-5.11751,-10 0/0:45.3271:7:7:239:0:0:0,-2.10721,-10 0/0:81.4506:19:19:715:0:0:0,-5.71957,-10 0/0:72.4198:16:16:605:0:0:0,-4.81648,-10 0/0:57.3683:11:11:418:0:0:0,-3.31133,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:57.3683:11:11:418:0:0:0,-3.31133,-10 0/0:51.3477:10:9:307:0:0:0,-2.70927,-10 0/0:81.4506:19:19:722:0:0:0,-5.71957,-10 0/0:99:36:36:1321:0:0:0,-10,-10 0/0:69.4095:15:15:556:0:0:0,-4.51545,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:63.3889:13:13:470:0:0:0,-3.91339,-10 0/0:51.3477:9:9:319:0:0:0,-2.70927,-10 0/0:63.3889:13:13:483:0:0:0,-3.91339,-10 0/0:42.3168:6:6:228:0:0:0,-1.80618,-10 0/0:51.3477:9:9:342:0:0:0,-2.70927,-10 0/0:99:31:31:1117:0:0:0,-9.33193,-10 0/0:93.4894:23:23:834:0:0:0,-6.92369,-10 0/0:75.4301:17:17:637:0:0:0,-5.11751,-10 0/0:72.4198:16:16:608:0:0:0,-4.81648,-10 0/0:99:31:31:1165:0:0:0,-9.33193,-10 0/0:45.3271:7:7:258:0:0:0,-2.10721,-10 0/0:48.3374:8:8:298:0:0:0,-2.40824,-10 0/0:48.3374:8:8:299:0:0:0,-2.40824,-10 0/0:36.2962:4:4:152:0:0:0,-1.20412,-10 0/0:48.3374:8:8:304:0:0:0,-2.40824,-10 0/0:57.3683:11:11:408:0:0:0,-3.31133,-10 0/0:63.3889:13:13:492:0:0:0,-3.91339,-10 scaffold_67 278416 . T G 83.5811 . AB=0.3125;ABP=7.89611;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1X;DP=1121;DPB=1121;DPRA=1.79499;EPP=3.0103;EPPR=39.5631;GTI=0;LEN=1;MEANALT=1;MQM=58.3333;MQMR=59.8332;NS=92;NUMALT=1;ODDS=9.24513;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=202;QR=40845;RO=1115;RPP=16.0391;RPPR=1633.51;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=556;SRP=3.02783;SRR=559;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.2249:8:8:304:0:0:0,-2.40824,-10 0/0:76.2764:13:13:490:0:0:0,-3.91339,-10 0/0:91.3279:18:18:671:0:0:0,-5.41854,-10 0/0:55.2043:6:6:221:0:0:0,-1.80618,-10 0/0:88.3174:17:17:619:0:0:0,-5.11751,-10 0/0:70.2558:11:11:390:0:0:0,-3.31133,-10 0/0:82.297:15:15:532:0:0:0,-4.51545,-10 0/0:94.3382:19:19:715:0:0:0,-5.71957,-10 0/0:61.2249:8:8:287:0:0:0,-2.40824,-10 0/0:43.1631:2:2:76:0:0:0,-0.60206,-7.22 0/0:58.2146:7:7:262:0:0:0,-2.10721,-10 0/0:58.2146:7:7:263:0:0:0,-2.10721,-10 0/0:99:25:25:878:0:0:0,-7.52575,-10 0/0:99:22:22:807:0:0:0,-6.62266,-10 0/0:76.2764:13:13:488:0:0:0,-3.91339,-10 0/0:91.3279:18:18:673:0:0:0,-5.41854,-10 0/0:82.297:15:15:565:0:0:0,-4.51545,-10 0/0:55.2043:6:6:213:0:0:0,-1.80618,-10 0/0:64.2352:9:9:342:0:0:0,-2.70927,-10 0/0:99:23:23:827:0:0:0,-6.92369,-10 0/0:67.2455:10:10:371:0:0:0,-3.0103,-10 0/0:73.2661:12:12:449:0:0:0,-3.61236,-10 0/0:58.2146:7:7:244:0:0:0,-2.10721,-10 0/0:70.2558:11:11:418:0:0:0,-3.31133,-10 0/0:70.2558:11:11:410:0:0:0,-3.31133,-10 0/0:70.2558:11:11:408:0:0:0,-3.31133,-10 0/0:55.2043:6:6:205:0:0:0,-1.80618,-10 0/0:67.2455:10:10:326:0:0:0,-3.0103,-10 0/0:97.3484:20:20:744:0:0:0,-6.0206,-10 0/0:82.297:15:15:541:0:0:0,-4.51545,-10 0/0:43.1631:2:2:76:0:0:0,-0.60206,-7.22 0/0:52.194:5:5:190:0:0:0,-1.50515,-10 0/0:58.2146:7:7:242:0:0:0,-2.10721,-10 0/0:85.3073:16:16:558:0:0:0,-4.81648,-10 0/0:94.3382:19:19:689:0:0:0,-5.71957,-10 0/0:49.1837:4:4:151:0:0:0,-1.20412,-10 0/0:67.2455:10:10:378:0:0:0,-3.0103,-10 0/0:91.3279:18:18:648:0:0:0,-5.41854,-10 0/0:64.2352:9:9:341:0:0:0,-2.70927,-10 0/0:61.2249:8:8:304:0:0:0,-2.40824,-10 0/0:76.2764:13:13:450:0:0:0,-3.91339,-10 0/0:82.297:15:15:542:0:0:0,-4.51545,-10 0/0:73.2661:12:12:436:0:0:0,-3.61236,-10 0/0:73.2661:12:12:433:0:0:0,-3.61236,-10 0/0:70.2558:11:11:408:0:0:0,-3.31133,-10 0/0:73.2661:12:12:433:0:0:0,-3.61236,-10 0/0:99:26:26:963:0:0:0,-7.82678,-10 0/0:82.297:15:15:545:0:0:0,-4.51545,-10 0/0:67.2455:10:10:376:0:0:0,-3.0103,-10 0/0:97.3484:20:20:744:0:0:0,-6.0206,-10 0/0:52.194:5:5:189:0:0:0,-1.50515,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:58.2146:7:7:246:0:0:0,-2.10721,-10 0/0:43.1631:2:2:73:0:0:0,-0.60206,-6.935 0/0:99:28:28:1047:0:0:0,-8.42884,-10 0/0:55.2043:6:6:224:0:0:0,-1.80618,-10 0/0:70.2558:11:11:395:0:0:0,-3.31133,-10 0/0:76.2764:13:13:444:0:0:0,-3.91339,-10 0/0:64.2352:9:9:336:0:0:0,-2.70927,-10 0/0:61.2249:8:8:282:0:0:0,-2.40824,-10 0/0:88.0405:27:26:980:1:16:0,-5.09645,-10 0/0:70.2558:11:11:402:0:0:0,-3.31133,-10 0/0:85.3073:16:16:601:0:0:0,-4.81648,-10 0/0:70.2558:11:11:418:0:0:0,-3.31133,-10 0/0:40.1528:1:1:38:0:0:0,-0.30103,-3.8 0/0:76.2764:13:13:450:0:0:0,-3.91339,-10 0/0:64.2352:9:9:329:0:0:0,-2.70927,-10 0/0:58.2146:7:7:263:0:0:0,-2.10721,-10 0/0:85.3073:16:16:597:0:0:0,-4.81648,-10 0/0:61.2249:8:8:282:0:0:0,-2.40824,-10 0/0:58.2146:7:7:255:0:0:0,-2.10721,-10 0/1:83.581:16:11:404:5:186:-10,0,-10 0/0:76.2764:13:13:472:0:0:0,-3.91339,-10 0/0:79.2867:14:14:515:0:0:0,-4.21442,-10 0/0:67.2455:10:10:355:0:0:0,-3.0103,-10 0/0:58.2146:7:7:266:0:0:0,-2.10721,-10 0/0:82.297:15:15:557:0:0:0,-4.51545,-10 0/0:43.1631:2:2:75:0:0:0,-0.60206,-7.125 0/0:52.194:5:5:190:0:0:0,-1.50515,-10 0/0:61.2249:8:8:278:0:0:0,-2.40824,-10 0/0:94.3382:19:19:695:0:0:0,-5.71957,-10 0/0:73.2661:12:12:445:0:0:0,-3.61236,-10 0/0:82.297:15:15:529:0:0:0,-4.51545,-10 0/0:99:21:21:785:0:0:0,-6.32163,-10 0/0:88.3174:17:17:610:0:0:0,-5.11751,-10 0/0:64.2352:9:9:324:0:0:0,-2.70927,-10 0/0:79.2867:14:14:532:0:0:0,-4.21442,-10 0/0:58.2146:7:7:265:0:0:0,-2.10721,-10 0/0:43.1631:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:22:22:806:0:0:0,-6.62266,-10 0/0:97.3484:20:20:721:0:0:0,-6.0206,-10 0/0:82.297:15:15:554:0:0:0,-4.51545,-10 scaffold_67 739449 . G A 1292.66 . AB=0.833333;ABP=60.9162;AC=4;AF=0.0217391;AN=184;AO=51;CIGAR=1X;DP=1660;DPB=1660;DPRA=0.75462;EPP=3.3935;EPPR=5.39244;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9988;NS=92;NUMALT=1;ODDS=3.37504;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1888;QR=58605;RO=1608;RPP=113.755;RPPR=3494.74;RUN=1;SAF=27;SAP=3.3935;SAR=24;SRF=825;SRP=5.39244;SRR=783;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:37.6844:9:9:335:0:0:0,-2.70927,-10 0/0:55.7462:15:15:568:0:0:0,-4.51545,-10 0/0:76.8183:22:22:805:0:0:0,-6.62266,-10 0/0:34.6741:8:8:269:0:0:0,-2.40824,-10 0/0:67.7874:19:19:693:0:0:0,-5.71957,-10 0/1:0.0678526:11:0:0:11:416:-10,-3.31133,0 0/0:99:39:39:1398:0:0:0,-10,-10 0/0:52.7359:14:14:528:0:0:0,-4.21442,-10 0/0:64.7771:18:18:658:0:0:0,-5.41854,-10 0/1:0.00105208:5:0:0:5:187:-10,-1.50515,0 0/1:0.136782:12:0:0:12:442:-10,-3.61236,0 0/0:25.6432:5:5:181:0:0:0,-1.50515,-10 0/0:97.8886:29:29:1091:0:0:0,-8.72987,-10 0/1:99:32:10:374:22:828:-10,0,-10 0/0:85.8491:25:25:899:0:0:0,-7.52575,-10 0/0:76.8183:22:22:809:0:0:0,-6.62266,-10 0/0:99:30:30:1129:0:0:0,-9.0309,-10 0/0:37.6844:9:9:327:0:0:0,-2.70927,-10 0/0:49.7256:13:13:492:0:0:0,-3.91339,-10 0/0:99:43:43:1534:0:0:0,-10,-10 0/0:52.7359:14:14:500:0:0:0,-4.21442,-10 0/0:97.8886:29:29:1085:0:0:0,-8.72987,-10 0/0:46.7153:12:12:452:0:0:0,-3.61236,-10 0/0:61.7668:17:17:598:0:0:0,-5.11751,-10 0/0:64.7771:18:18:641:0:0:0,-5.41854,-10 0/0:61.7668:17:17:634:0:0:0,-5.11751,-10 0/0:46.7153:12:12:393:0:0:0,-3.61236,-10 0/0:52.7359:14:14:514:0:0:0,-4.21442,-10 0/0:73.808:21:21:777:0:0:0,-6.32163,-10 0/0:73.808:21:21:743:0:0:0,-6.32163,-10 0/0:19.6226:3:3:114:0:0:0,-0.90309,-10 0/0:61.7668:17:17:587:0:0:0,-5.11751,-10 0/0:37.6844:9:9:324:0:0:0,-2.70927,-10 0/0:43.705:11:11:407:0:0:0,-3.31133,-10 0/0:52.7359:14:14:531:0:0:0,-4.21442,-10 0/0:28.6535:6:6:228:0:0:0,-1.80618,-10 0/0:49.7256:13:13:448:0:0:0,-3.91339,-10 0/0:88.8593:26:26:944:0:0:0,-7.82678,-10 0/0:58.7565:17:16:583:0:0:0,-4.81648,-10 0/0:40.6947:10:10:368:0:0:0,-3.0103,-10 0/0:99:30:30:1116:0:0:0,-9.0309,-10 0/0:76.8183:22:22:817:0:0:0,-6.62266,-10 0/0:70.7977:20:20:720:0:0:0,-6.0206,-10 0/0:99:30:30:1080:0:0:0,-9.0309,-10 0/0:94.8792:28:28:1033:0:0:0,-8.42884,-10 0/0:49.7256:13:13:483:0:0:0,-3.91339,-10 0/0:99:39:39:1473:0:0:0,-10,-10 0/0:49.7256:13:13:486:0:0:0,-3.91339,-10 0/0:61.7668:17:17:569:0:0:0,-5.11751,-10 0/0:94.8792:28:28:1027:0:0:0,-8.42884,-10 0/0:49.7256:13:13:458:0:0:0,-3.91339,-10 0/0:99:34:34:1238:0:0:0,-10,-10 0/0:61.7668:17:17:594:0:0:0,-5.11751,-10 0/0:25.6432:5:5:190:0:0:0,-1.50515,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:49.7256:13:13:489:0:0:0,-3.91339,-10 0/0:73.808:21:21:759:0:0:0,-6.32163,-10 0/0:25.6432:5:5:167:0:0:0,-1.50515,-10 0/0:49.7256:13:13:491:0:0:0,-3.91339,-10 0/0:34.6741:8:8:301:0:0:0,-2.40824,-10 0/0:79.8286:23:23:855:0:0:0,-6.92369,-10 0/0:67.7874:19:19:722:0:0:0,-5.71957,-10 0/0:99:38:38:1358:0:0:0,-10,-10 0/0:91.8694:27:27:963:0:0:0,-8.12781,-10 0/0:34.6741:8:8:281:0:0:0,-2.40824,-10 0/0:91.8694:27:27:966:0:0:0,-8.12781,-10 0/0:61.7668:17:17:611:0:0:0,-5.11751,-10 0/0:52.7359:14:14:499:0:0:0,-4.21442,-10 0/0:99:31:31:1157:0:0:0,-9.33193,-10 0/0:16.1614:9:8:279:1:15:0,-0.255027,-10 0/0:61.7668:17:17:613:0:0:0,-5.11751,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:85.8491:25:25:909:0:0:0,-7.52575,-10 0/0:58.7565:16:16:570:0:0:0,-4.81648,-10 0/0:88.8593:26:26:974:0:0:0,-7.82678,-10 0/0:40.6947:10:10:354:0:0:0,-3.0103,-10 0/0:52.7359:14:14:476:0:0:0,-4.21442,-10 0/0:55.7462:15:15:496:0:0:0,-4.51545,-10 0/0:40.6947:10:10:369:0:0:0,-3.0103,-10 0/0:37.6844:9:9:331:0:0:0,-2.70927,-10 0/0:99:32:32:1202:0:0:0,-9.63296,-10 0/0:67.7874:19:19:714:0:0:0,-5.71957,-10 0/0:52.7359:14:14:480:0:0:0,-4.21442,-10 0/0:55.7462:15:15:544:0:0:0,-4.51545,-10 0/0:58.7565:16:16:570:0:0:0,-4.81648,-10 0/0:40.6947:10:10:365:0:0:0,-3.0103,-10 0/0:55.7462:15:15:560:0:0:0,-4.51545,-10 0/0:43.705:11:11:417:0:0:0,-3.31133,-10 0/0:40.6947:10:10:362:0:0:0,-3.0103,-10 0/0:40.6947:10:10:378:0:0:0,-3.0103,-10 0/0:70.7977:20:20:726:0:0:0,-6.0206,-10 0/0:58.7565:16:16:587:0:0:0,-4.81648,-10 scaffold_67 928371 . C T 763.783 . AB=0.702128;ABP=19.6891;AC=4;AF=0.021978;AN=182;AO=33;CIGAR=1X;DP=1339;DPB=1339;DPRA=0.791215;EPP=6.23461;EPPR=19.9844;GTI=2;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9502;NS=91;NUMALT=1;ODDS=5.90315;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1190;QR=48308;RO=1305;RPP=74.6689;RPPR=2648.91;RUN=1;SAF=13;SAP=6.23461;SAR=20;SRF=624;SRP=8.41652;SRR=681;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.0021523:9:0:0:9:340:-10,-2.70927,0 0/1:0.0021523:9:0:0:9:309:-10,-2.70927,0 0/1:99:14:4:148:9:313:-10,0,-10 0/0:34.7226:5:5:189:0:0:0,-1.50515,-10 0/0:49.7741:10:10:357:0:0:0,-3.0103,-10 0/0:37.7329:6:6:228:0:0:0,-1.80618,-10 0/0:99:33:33:1237:0:0:0,-9.93399,-10 0/0:76.8668:19:19:717:0:0:0,-5.71957,-10 0/0:55.7947:12:12:450:0:0:0,-3.61236,-10 0/0:25.6917:2:2:76:0:0:0,-0.60206,-7.22 0/0:25.6917:2:2:71:0:0:0,-0.60206,-6.745 0/0:31.7123:4:4:146:0:0:0,-1.20412,-10 0/0:70.8462:17:17:646:0:0:0,-5.11751,-10 0/0:99:29:29:1044:0:0:0,-8.72987,-10 0/0:70.8462:17:17:638:0:0:0,-5.11751,-10 0/0:61.8153:14:14:528:0:0:0,-4.21442,-10 0/0:76.8668:19:19:697:0:0:0,-5.71957,-10 0/0:40.7432:7:7:262:0:0:0,-2.10721,-10 0/0:94.9282:25:25:947:0:0:0,-7.52575,-10 0/0:97.9382:26:26:977:0:0:0,-7.82678,-10 0/0:64.8256:15:15:550:0:0:0,-4.51545,-10 0/0:97.9382:26:26:985:0:0:0,-7.82678,-10 0/0:34.7226:5:5:185:0:0:0,-1.50515,-10 0/0:52.7844:11:11:390:0:0:0,-3.31133,-10 0/0:49.7741:10:10:375:0:0:0,-3.0103,-10 0/0:55.7947:12:12:433:0:0:0,-3.61236,-10 0/0:46.7638:9:9:313:0:0:0,-2.70927,-10 0/0:43.7535:8:8:278:0:0:0,-2.40824,-10 0/0:79.8771:20:20:738:0:0:0,-6.0206,-10 0/0:91.9181:24:24:904:0:0:0,-7.22472,-10 0/0:40.7432:7:7:266:0:0:0,-2.10721,-10 0/0:58.805:13:13:483:0:0:0,-3.91339,-10 0/0:70.8462:17:17:638:0:0:0,-5.11751,-10 0/0:52.7844:11:11:404:0:0:0,-3.31133,-10 0/0:46.7638:9:9:342:0:0:0,-2.70927,-10 0/0:46.7638:9:9:322:0:0:0,-2.70927,-10 0/0:49.7741:10:10:364:0:0:0,-3.0103,-10 0/0:61.8153:14:14:520:0:0:0,-4.21442,-10 0/0:46.7638:9:9:320:0:0:0,-2.70927,-10 0/0:49.7741:10:10:375:0:0:0,-3.0103,-10 0/0:85.8977:22:22:821:0:0:0,-6.62266,-10 0/0:55.7947:12:12:446:0:0:0,-3.61236,-10 0/0:58.805:13:13:483:0:0:0,-3.91339,-10 0/0:99:36:36:1266:0:0:0,-10,-10 0/0:52.7844:11:11:394:0:0:0,-3.31133,-10 0/0:40.7432:7:7:238:0:0:0,-2.10721,-10 0/0:99:29:29:1076:0:0:0,-8.72987,-10 0/0:55.7947:12:12:444:0:0:0,-3.61236,-10 0/0:46.7638:9:9:341:0:0:0,-2.70927,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:52.7844:11:11:418:0:0:0,-3.31133,-10 0/0:99:29:29:1088:0:0:0,-8.72987,-10 0/0:49.7741:10:10:380:0:0:0,-3.0103,-10 0/0:40.7432:7:7:264:0:0:0,-2.10721,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:43.7535:8:8:295:0:0:0,-2.40824,-10 0/0:61.8153:14:14:518:0:0:0,-4.21442,-10 0/0:31.7123:4:4:149:0:0:0,-1.20412,-10 0/0:58.805:13:13:455:0:0:0,-3.91339,-10 0/0:52.7844:11:11:417:0:0:0,-3.31133,-10 0/0:99:28:28:1021:0:0:0,-8.42884,-10 0/0:73.8565:18:18:651:0:0:0,-5.41854,-10 0/0:99:32:32:1201:0:0:0,-9.63296,-10 0/0:49.7741:10:10:366:0:0:0,-3.0103,-10 0/0:55.7947:12:12:456:0:0:0,-3.61236,-10 0/0:70.8462:17:17:628:0:0:0,-5.11751,-10 0/0:70.8462:17:17:646:0:0:0,-5.11751,-10 0/0:46.7638:9:9:342:0:0:0,-2.70927,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:37.7329:6:6:226:0:0:0,-1.80618,-10 0/0:82.8874:21:21:791:0:0:0,-6.32163,-10 0/0:76.8668:19:19:720:0:0:0,-5.71957,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:73.8565:18:18:671:0:0:0,-5.41854,-10 0/0:79.8771:20:20:735:0:0:0,-6.0206,-10 0/0:46.7638:9:9:342:0:0:0,-2.70927,-10 0/0:40.7432:7:7:262:0:0:0,-2.10721,-10 0/0:49.7741:10:10:373:0:0:0,-3.0103,-10 0/0:40.7432:7:7:242:0:0:0,-2.10721,-10 0/0:46.7638:9:9:315:0:0:0,-2.70927,-10 0/0:88.9079:23:23:831:0:0:0,-6.92369,-10 0/0:73.8565:18:18:673:0:0:0,-5.41854,-10 0/0:73.8565:18:18:672:0:0:0,-5.41854,-10 0/1:99:15:9:335:6:228:-10,0,-10 0/0:79.8771:20:20:754:0:0:0,-6.0206,-10 0/0:25.6917:2:2:76:0:0:0,-0.60206,-7.22 0/0:58.805:13:13:486:0:0:0,-3.91339,-10 0/0:37.7329:6:6:228:0:0:0,-1.80618,-10 .:.:.:.:.:.:.:. 0/0:46.7638:9:9:334:0:0:0,-2.70927,-10 0/0:73.8565:18:18:656:0:0:0,-5.41854,-10 0/0:61.8153:14:14:521:0:0:0,-4.21442,-10 scaffold_67 945561 . G A 827.19 . AB=0.589286;ABP=6.88793;AC=2;AF=0.0108696;AN=184;AO=35;CIGAR=1X;DP=2454;DPB=2454;DPRA=1.27341;EPP=3.56868;EPPR=5.34515;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9682;NS=92;NUMALT=1;ODDS=10.0201;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1191;QR=88962;RO=2419;RPP=79.0118;RPPR=5255.8;RUN=1;SAF=19;SAP=3.56868;SAR=16;SRF=1235;SRP=5.34515;SRR=1184;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:85.6616:21:21:789:0:0:0,-6.32163,-10 0/0:61.5794:13:13:461:0:0:0,-3.91339,-10 0/0:99:34:34:1281:0:0:0,-10,-10 0/0:67.6:15:15:570:0:0:0,-4.51545,-10 0/1:99:21:9:342:12:420:-10,0,-10 0/0:70.6103:16:16:591:0:0:0,-4.81648,-10 0/0:99:67:67:2526:0:0:0,-10,-10 0/0:99:30:30:1077:0:0:0,-9.0309,-10 0/0:85.6616:21:21:768:0:0:0,-6.32163,-10 0/0:52.5485:10:10:374:0:0:0,-3.0103,-10 0/0:67.6:15:15:560:0:0:0,-4.51545,-10 0/0:67.6:15:15:558:0:0:0,-4.51545,-10 0/0:99:49:49:1784:0:0:0,-10,-10 0/0:99:36:36:1314:0:0:0,-10,-10 0/0:99:40:40:1451:0:0:0,-10,-10 0/1:99:35:14:522:21:739:-10,0,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/0:55.5588:11:11:412:0:0:0,-3.31133,-10 0/0:94.6911:24:24:888:0:0:0,-7.22472,-10 0/0:99:38:38:1426:0:0:0,-10,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:99:46:46:1675:0:0:0,-10,-10 0/0:76.6309:18:18:669:0:0:0,-5.41854,-10 0/0:79.6411:19:19:695:0:0:0,-5.71957,-10 0/0:99:26:26:940:0:0:0,-7.82678,-10 0/0:99:34:34:1261:0:0:0,-10,-10 0/0:99:26:26:952:0:0:0,-7.82678,-10 0/0:88.6717:22:22:827:0:0:0,-6.62266,-10 0/0:91.6816:23:23:834:0:0:0,-6.92369,-10 0/0:99:47:47:1761:0:0:0,-10,-10 0/0:55.5588:11:11:377:0:0:0,-3.31133,-10 0/0:67.6:15:15:538:0:0:0,-4.51545,-10 0/0:79.6411:19:19:717:0:0:0,-5.71957,-10 0/0:52.5485:10:10:373:0:0:0,-3.0103,-10 0/0:99:26:26:920:0:0:0,-7.82678,-10 0/0:43.5176:7:7:266:0:0:0,-2.10721,-10 0/0:55.5588:11:11:393:0:0:0,-3.31133,-10 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:85.6616:21:21:778:0:0:0,-6.32163,-10 0/0:82.6514:20:20:746:0:0:0,-6.0206,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:99:39:39:1434:0:0:0,-10,-10 0/0:99:35:35:1289:0:0:0,-10,-10 0/0:91.6816:23:23:835:0:0:0,-6.92369,-10 0/0:99:75:75:2774:0:0:0,-10,-10 0/0:99:32:32:1213:0:0:0,-9.63296,-10 0/0:76.6309:18:18:680:0:0:0,-5.41854,-10 0/0:99:52:52:1844:0:0:0,-10,-10 0/0:55.5588:11:11:414:0:0:0,-3.31133,-10 0/0:99:49:49:1804:0:0:0,-10,-10 0/0:85.6616:21:21:785:0:0:0,-6.32163,-10 0/0:55.5588:11:11:395:0:0:0,-3.31133,-10 0/0:99:45:43:1568:2:32:0,-7.51071,-10 0/0:79.6411:19:19:641:0:0:0,-5.71957,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:46.5279:8:8:282:0:0:0,-2.40824,-10 0/0:82.6514:20:20:736:0:0:0,-6.0206,-10 0/0:49.5382:9:9:342:0:0:0,-2.70927,-10 0/0:99:45:45:1681:0:0:0,-10,-10 0/0:99:34:34:1245:0:0:0,-10,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:97.6998:25:25:922:0:0:0,-7.52575,-10 0/0:82.6514:20:20:719:0:0:0,-6.0206,-10 0/0:99:46:46:1683:0:0:0,-10,-10 0/0:76.6309:18:18:656:0:0:0,-5.41854,-10 0/0:61.5794:13:13:469:0:0:0,-3.91339,-10 0/0:99:37:37:1379:0:0:0,-10,-10 0/0:70.6103:16:16:577:0:0:0,-4.81648,-10 0/0:91.6816:23:23:858:0:0:0,-6.92369,-10 0/0:99:35:35:1313:0:0:0,-10,-10 0/0:99:41:41:1519:0:0:0,-10,-10 0/0:91.6816:23:23:803:0:0:0,-6.92369,-10 0/0:99:50:50:1831:0:0:0,-10,-10 0/0:67.6:15:15:565:0:0:0,-4.51545,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:82.6514:20:20:725:0:0:0,-6.0206,-10 0/0:43.5176:7:7:266:0:0:0,-2.10721,-10 0/0:55.5588:11:11:414:0:0:0,-3.31133,-10 0/0:99:46:46:1718:0:0:0,-10,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:99:26:26:974:0:0:0,-7.82678,-10 0/0:99:34:34:1277:0:0:0,-10,-10 0/0:99:47:47:1711:0:0:0,-10,-10 0/0:64.5897:14:14:521:0:0:0,-4.21442,-10 0/0:99:30:30:1124:0:0:0,-9.0309,-10 0/0:64.5897:14:14:495:0:0:0,-4.21442,-10 0/0:55.5588:11:11:414:0:0:0,-3.31133,-10 0/0:91.6816:23:23:841:0:0:0,-6.92369,-10 0/0:97.6998:25:25:849:0:0:0,-7.52575,-10 0/0:55.5588:11:11:416:0:0:0,-3.31133,-10 scaffold_67 972853 . G A 4734.47 . AB=0.583333;ABP=11.6962;AC=15;AF=0.0815217;AN=184;AO=179;CIGAR=1X;DP=2165;DPB=2165;DPRA=0.979109;EPP=3.11948;EPPR=3.25644;GTI=1;LEN=1;MEANALT=1;MQM=59.8715;MQMR=59.9758;NS=92;NUMALT=1;ODDS=2.79085;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6495;QR=71599;RO=1985;RPP=391.704;RPPR=4313.38;RUN=1;SAF=88;SAP=3.11948;SAR=91;SRF=1000;SRP=3.25644;SRR=985;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:41.5339:16:1:38:15:558:-10,0,-0.18764 0/0:34.9159:8:8:299:0:0:0,-2.40824,-10 0/1:99:21:9:319:12:412:-10,0,-10 0/0:47.5802:21:20:718:1:16:0,-3.39941,-10 0/0:40.9365:10:10:363:0:0:0,-3.0103,-10 0/0:40.9365:10:10:374:0:0:0,-3.0103,-10 0/1:99:32:15:561:17:645:-10,0,-10 0/0:99:34:34:1278:0:0:0,-10,-10 0/0:62.0086:17:17:644:0:0:0,-5.11751,-10 0/0:31.9056:7:7:244:0:0:0,-2.10721,-10 0/0:37.9262:9:9:320:0:0:0,-2.70927,-10 0/0:37.9262:9:9:342:0:0:0,-2.70927,-10 0/0:56.0312:24:23:826:1:16:0,-4.24451,-10 0/0:99:35:35:1272:0:0:0,-10,-10 0/0:99:30:30:1125:0:0:0,-9.0309,-10 0/0:71.0395:20:20:703:0:0:0,-6.0206,-10 0/1:99:24:10:376:14:503:-10,0,-10 1/1:19.4423:18:0:0:18:635:-10,-5.41854,0 0/0:99:31:31:1098:0:0:0,-9.33193,-10 0/0:99:48:48:1652:0:0:0,-10,-10 0/0:77.0601:22:22:800:0:0:0,-6.62266,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:37.9262:9:9:315:0:0:0,-2.70927,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:41.9943:19:18:648:1:16:0,-2.84082,-10 0/0:89.1006:26:26:914:0:0:0,-7.82678,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:83.0807:24:24:856:0:0:0,-7.22472,-10 0/0:86.0906:25:25:878:0:0:0,-7.52575,-10 0/0:99:55:55:1986:0:0:0,-10,-10 0/0:31.9056:7:7:242:0:0:0,-2.10721,-10 0/0:22.8747:4:4:145:0:0:0,-1.20412,-10 0/0:68.0292:19:19:674:0:0:0,-5.71957,-10 0/0:55.988:15:15:560:0:0:0,-4.51545,-10 0/0:79.8641:32:31:1110:1:15:0,-6.62781,-10 0/0:28.8953:6:6:200:0:0:0,-1.80618,-10 0/0:40.9365:10:10:314:0:0:0,-3.0103,-10 0/0:99:34:34:1277:0:0:0,-10,-10 0/0:46.9571:12:12:430:0:0:0,-3.61236,-10 0/0:80.0703:23:23:855:0:0:0,-6.92369,-10 0/0:99:38:38:1371:0:0:0,-10,-10 0/0:77.0601:22:22:827:0:0:0,-6.62266,-10 0/0:52.9777:14:14:503:0:0:0,-4.21442,-10 0/0:99:37:37:1373:0:0:0,-10,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:46.9571:12:12:453:0:0:0,-3.61236,-10 0/0:99:59:59:2106:0:0:0,-10,-10 0/0:99:33:33:1134:0:0:0,-9.93399,-10 0/0:43.9468:11:11:380:0:0:0,-3.31133,-10 0/0:99:52:52:1886:0:0:0,-10,-10 0/0:62.0086:17:17:634:0:0:0,-5.11751,-10 0/0:79.9775:40:39:1414:1:38:0,-6.63914,-10 0/0:86.0906:25:25:930:0:0:0,-7.52575,-10 0/0:40.9365:10:10:335:0:0:0,-3.0103,-10 0/0:99:42:42:1448:0:0:0,-10,-10 1/1:37.5041:24:0:0:24:907:-10,-7.22472,0 0/0:80.0703:23:23:807:0:0:0,-6.92369,-10 0/0:28.8953:6:6:226:0:0:0,-1.80618,-10 0/0:99:32:32:1197:0:0:0,-9.63296,-10 0/1:0.24963:10:0:0:10:373:-10,-3.0103,0 0/0:99:45:45:1615:0:0:0,-10,-10 0/0:92.1102:28:27:947:0:0:0,-8.12781,-10 1/1:52.5556:29:0:0:29:1073:-10,-8.72987,0 0/0:99:38:38:1312:0:0:0,-10,-10 0/0:58.9983:16:16:608:0:0:0,-4.81648,-10 0/0:99:45:45:1631:0:0:0,-10,-10 0/1:99:17:9:282:8:302:-10,0,-10 0/0:62.0086:17:17:611:0:0:0,-5.11751,-10 0/0:99:47:47:1654:0:0:0,-10,-10 0/0:55.988:15:15:556:0:0:0,-4.51545,-10 0/0:46.9571:12:12:445:0:0:0,-3.61236,-10 0/0:99:47:47:1670:0:0:0,-10,-10 0/0:92.1102:27:27:1012:0:0:0,-8.12781,-10 0/0:34.9159:8:8:297:0:0:0,-2.40824,-10 0/0:89.1006:26:26:973:0:0:0,-7.82678,-10 0/0:62.0086:17:17:600:0:0:0,-5.11751,-10 1/1:22.4526:19:0:0:19:692:-10,-5.71957,0 0/0:43.9468:11:11:399:0:0:0,-3.31133,-10 0/0:40.9365:10:10:355:0:0:0,-3.0103,-10 0/0:65.0189:18:18:642:0:0:0,-5.41854,-10 0/0:99:60:60:2184:0:0:0,-10,-10 0/0:86.0906:25:25:909:0:0:0,-7.52575,-10 0/0:98.1268:29:29:1011:0:0:0,-8.72987,-10 0/1:99:24:16:576:8:294:-10,0,-10 0/0:89.1006:26:26:945:0:0:0,-7.82678,-10 0/0:22.8747:4:4:129:0:0:0,-1.20412,-10 0/0:86.0906:25:25:878:0:0:0,-7.52575,-10 0/0:46.9571:12:12:442:0:0:0,-3.61236,-10 0/0:31.9056:7:7:230:0:0:0,-2.10721,-10 0/0:62.0086:17:17:638:0:0:0,-5.11751,-10 0/0:58.9983:16:16:596:0:0:0,-4.81648,-10 0/0:86.0906:25:25:905:0:0:0,-7.52575,-10 scaffold_67 982209 . T C 1667.26 . AB=0.73913;ABP=37.2818;AC=6;AF=0.0326087;AN=184;AO=69;CIGAR=1X;DP=1693;DPB=1693;DPRA=0.926346;EPP=5.55942;EPPR=3.05844;GTI=4;LEN=1;MEANALT=1;MQM=60;MQMR=59.9692;NS=92;NUMALT=1;ODDS=0.129733;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2514;QR=59859;RO=1624;RPP=144.282;RPPR=3426.02;RUN=1;SAF=29;SAP=6.81824;SAR=40;SRF=797;SRP=4.2137;SRR=827;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:67.1659:17:17:624:0:0:0,-5.11751,-10 0/1:0.739528:14:0:0:14:529:-10,-4.21442,0 0/0:46.0938:10:10:368:0:0:0,-3.0103,-10 0/1:0.0858416:11:0:0:11:377:-10,-3.31133,0 0/0:37.0629:7:7:254:0:0:0,-2.10721,-10 0/0:46.0938:10:10:329:0:0:0,-3.0103,-10 0/0:99:43:43:1591:0:0:0,-10,-10 0/0:61.1453:15:15:556:0:0:0,-4.51545,-10 0/0:82.2173:22:22:769:0:0:0,-6.62266,-10 0/0:25.0217:3:3:114:0:0:0,-0.90309,-10 0/0:40.0732:8:8:303:0:0:0,-2.40824,-10 0/0:40.0732:8:8:282:0:0:0,-2.40824,-10 0/0:94.257:26:26:903:0:0:0,-7.82678,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:99:29:29:1096:0:0:0,-8.72987,-10 0/0:67.1659:17:17:646:0:0:0,-5.11751,-10 0/0:43.0835:9:9:338:0:0:0,-2.70927,-10 0/0:61.1453:15:15:570:0:0:0,-4.51545,-10 0/0:99:47:47:1758:0:0:0,-10,-10 0/0:76.1968:20:20:722:0:0:0,-6.0206,-10 0/0:64.1556:16:16:572:0:0:0,-4.81648,-10 0/0:55.1247:13:13:492:0:0:0,-3.91339,-10 0/0:99:28:28:985:0:0:0,-8.42884,-10 0/0:76.1968:20:20:723:0:0:0,-6.0206,-10 0/0:58.135:14:14:490:0:0:0,-4.21442,-10 0/0:61.1453:15:15:563:0:0:0,-4.51545,-10 0/0:55.1247:13:13:494:0:0:0,-3.91339,-10 0/0:73.1865:19:19:713:0:0:0,-5.71957,-10 0/0:99:32:32:1188:0:0:0,-9.63296,-10 0/0:28.032:4:4:147:0:0:0,-1.20412,-10 0/0:40.0732:8:8:293:0:0:0,-2.40824,-10 0/0:64.1556:16:16:577:0:0:0,-4.81648,-10 0/0:49.1041:11:11:400:0:0:0,-3.31133,-10 0/0:0.0603621:16:15:549:1:38:-0.18764,0,-10 0/0:25.0217:3:3:114:0:0:0,-0.90309,-10 0/0:34.0526:6:6:221:0:0:0,-1.80618,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:73.1865:19:19:714:0:0:0,-5.71957,-10 0/0:49.1041:11:11:413:0:0:0,-3.31133,-10 0/0:99:37:37:1376:0:0:0,-10,-10 0/0:67.1659:17:17:631:0:0:0,-5.11751,-10 0/0:85.2275:23:23:841:0:0:0,-6.92369,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:88.2376:24:24:868:0:0:0,-7.22472,-10 0/0:52.1144:12:12:447:0:0:0,-3.61236,-10 0/0:99:40:40:1487:0:0:0,-10,-10 0/0:70.1762:18:18:679:0:0:0,-5.41854,-10 0/0:52.1144:12:12:448:0:0:0,-3.61236,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/0:70.1762:18:18:680:0:0:0,-5.41854,-10 0/0:99:37:37:1377:0:0:0,-10,-10 0/0:64.1556:16:16:582:0:0:0,-4.81648,-10 0/0:40.0732:8:8:304:0:0:0,-2.40824,-10 0/0:99:43:43:1592:0:0:0,-10,-10 0/0:46.0938:10:10:347:0:0:0,-3.0103,-10 0/0:76.1968:20:20:735:0:0:0,-6.0206,-10 0/0:28.032:4:4:152:0:0:0,-1.20412,-10 0/0:55.1247:13:13:478:0:0:0,-3.91339,-10 0/0:73.1865:19:19:720:0:0:0,-5.71957,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:85.2275:23:23:843:0:0:0,-6.92369,-10 0/0:99:53:53:1989:0:0:0,-10,-10 0/0:58.135:14:14:525:0:0:0,-4.21442,-10 0/0:43.0835:9:9:342:0:0:0,-2.70927,-10 0/0:76.1968:20:20:731:0:0:0,-6.0206,-10 0/0:67.1659:17:17:636:0:0:0,-5.11751,-10 0/0:37.0629:7:7:266:0:0:0,-2.10721,-10 0/0:99:29:29:1082:0:0:0,-8.72987,-10 0/0:46.0938:10:10:376:0:0:0,-3.0103,-10 0/0:76.1968:20:20:736:0:0:0,-6.0206,-10 0/0:64.1556:16:16:594:0:0:0,-4.81648,-10 0/0:73.1865:19:19:718:0:0:0,-5.71957,-10 0/0:64.1556:16:16:571:0:0:0,-4.81648,-10 0/0:82.2173:22:22:812:0:0:0,-6.62266,-10 0/0:37.0629:7:7:251:0:0:0,-2.10721,-10 0/0:46.0938:10:10:367:0:0:0,-3.0103,-10 0/0:64.1556:16:16:603:0:0:0,-4.81648,-10 0/0:34.0526:6:6:227:0:0:0,-1.80618,-10 0/0:58.135:14:14:528:0:0:0,-4.21442,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/1:99:29:18:680:11:407:-10,0,-10 0/0:76.1968:20:20:735:0:0:0,-6.0206,-10 0/0:85.2275:23:23:867:0:0:0,-6.92369,-10 0/0:79.2071:21:21:764:0:0:0,-6.32163,-10 0/0:28.032:4:4:151:0:0:0,-1.20412,-10 0/0:49.1041:11:11:401:0:0:0,-3.31133,-10 0/0:24.3489:19:18:590:1:38:0,-0.640816,-10 0/0:34.0526:6:6:228:0:0:0,-1.80618,-10 0/1:1.63136:15:0:0:15:549:-10,-4.51545,0 0/0:52.1144:12:12:433:0:0:0,-3.61236,-10 1/1:9.09272:16:0:0:16:576:-10,-4.81648,0 scaffold_67 984173 . A G 314.161 . AB=0.764706;ABP=13.3567;AC=1;AF=0.00549451;AN=182;AO=15;CIGAR=1X;DP=1217;DPB=1217;DPRA=0.996885;EPP=4.31318;EPPR=17.0002;GTI=1;LEN=1;MEANALT=1;MQM=59.8;MQMR=59.9709;NS=91;NUMALT=1;ODDS=1.87097;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=546;QR=44481;RO=1202;RPP=35.5824;RPPR=2417.17;RUN=1;SAF=6;SAP=4.31318;SAR=9;SRF=624;SRP=6.83296;SRR=578;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.2779:12:12:455:0:0:0,-3.61236,-10 0/0:31.2058:5:5:189:0:0:0,-1.50515,-10 0/0:46.2573:10:10:379:0:0:0,-3.0103,-10 0/0:46.2573:10:10:379:0:0:0,-3.0103,-10 0/0:40.2367:8:8:282:0:0:0,-2.40824,-10 0/0:43.247:9:9:342:0:0:0,-2.70927,-10 0/0:76.3603:20:20:741:0:0:0,-6.0206,-10 0/0:76.3603:20:20:760:0:0:0,-6.0206,-10 0/0:43.247:9:9:342:0:0:0,-2.70927,-10 0/0:22.1749:2:2:72:0:0:0,-0.60206,-6.84 0/0:25.1852:3:3:114:0:0:0,-0.90309,-10 0/0:34.2161:6:6:228:0:0:0,-1.80618,-10 0/0:73.35:19:19:721:0:0:0,-5.71957,-10 0/0:99:36:36:1343:0:0:0,-10,-10 0/0:79.3706:21:21:771:0:0:0,-6.32163,-10 0/0:70.3397:18:18:675:0:0:0,-5.41854,-10 0/0:55.2882:13:13:478:0:0:0,-3.91339,-10 0/0:40.2367:8:8:299:0:0:0,-2.40824,-10 0/0:64.3191:16:16:605:0:0:0,-4.81648,-10 0/0:91.4117:25:25:928:0:0:0,-7.52575,-10 0/0:52.2779:12:12:448:0:0:0,-3.61236,-10 0/0:82.3809:22:22:809:0:0:0,-6.62266,-10 .:.:.:.:.:.:.:. 0/0:58.2985:14:14:531:0:0:0,-4.21442,-10 0/0:67.3294:17:17:614:0:0:0,-5.11751,-10 0/0:73.35:19:19:712:0:0:0,-5.71957,-10 0/0:43.247:9:9:340:0:0:0,-2.70927,-10 0/0:46.2573:10:10:343:0:0:0,-3.0103,-10 0/0:40.2367:8:8:291:0:0:0,-2.40824,-10 0/0:64.3191:16:16:584:0:0:0,-4.81648,-10 0/0:31.2058:5:5:190:0:0:0,-1.50515,-10 0/0:34.2161:6:6:225:0:0:0,-1.80618,-10 0/0:26.7274:11:10:359:1:14:0,-0.869937,-10 0/0:55.2882:13:13:488:0:0:0,-3.91339,-10 0/0:49.2676:11:11:417:0:0:0,-3.31133,-10 0/0:37.2264:7:7:266:0:0:0,-2.10721,-10 0/0:43.247:9:9:314:0:0:0,-2.70927,-10 0/0:79.3706:21:21:781:0:0:0,-6.32163,-10 0/0:58.2985:14:14:512:0:0:0,-4.21442,-10 0/0:40.2367:8:8:303:0:0:0,-2.40824,-10 0/0:85.3912:23:23:836:0:0:0,-6.92369,-10 0/0:52.2779:12:12:441:0:0:0,-3.61236,-10 0/0:55.2882:13:13:490:0:0:0,-3.91339,-10 0/0:73.35:19:19:677:0:0:0,-5.71957,-10 0/0:70.3397:18:18:683:0:0:0,-5.41854,-10 0/0:37.2264:7:7:238:0:0:0,-2.10721,-10 0/0:99:34:34:1253:0:0:0,-10,-10 0/0:67.3294:17:17:612:0:0:0,-5.11751,-10 0/0:43.247:9:9:338:0:0:0,-2.70927,-10 0/0:97.4317:27:27:1004:0:0:0,-8.12781,-10 0/0:46.2573:10:10:355:0:0:0,-3.0103,-10 0/0:88.4015:24:24:876:0:0:0,-7.22472,-10 0/0:55.2882:13:13:494:0:0:0,-3.91339,-10 0/0:31.2058:5:5:190:0:0:0,-1.50515,-10 0/0:88.4015:24:24:852:0:0:0,-7.22472,-10 0/0:43.247:9:9:325:0:0:0,-2.70927,-10 0/0:64.3191:16:16:580:0:0:0,-4.81648,-10 0/0:25.1852:3:3:114:0:0:0,-0.90309,-10 0/0:46.2573:10:10:380:0:0:0,-3.0103,-10 0/0:46.2573:10:10:369:0:0:0,-3.0103,-10 0/0:73.35:19:19:722:0:0:0,-5.71957,-10 0/0:34.2161:6:6:228:0:0:0,-1.80618,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:52.2779:12:12:455:0:0:0,-3.61236,-10 0/0:37.2264:7:7:259:0:0:0,-2.10721,-10 0/1:99:17:4:152:13:494:-10,0,-10 0/0:64.3191:16:16:566:0:0:0,-4.81648,-10 0/0:40.2367:8:8:304:0:0:0,-2.40824,-10 0/0:91.4117:25:25:894:0:0:0,-7.52575,-10 0/0:55.2882:13:13:468:0:0:0,-3.91339,-10 0/0:49.2676:11:11:405:0:0:0,-3.31133,-10 0/0:58.2985:14:14:531:0:0:0,-4.21442,-10 0/0:49.2676:11:11:417:0:0:0,-3.31133,-10 0/0:0.601661:12:11:407:1:38:-1.26682,0,-10 0/0:67.3294:17:17:646:0:0:0,-5.11751,-10 0/0:37.2264:7:7:244:0:0:0,-2.10721,-10 0/0:40.2367:8:8:300:0:0:0,-2.40824,-10 0/0:49.2676:11:11:402:0:0:0,-3.31133,-10 0/0:25.1852:3:3:114:0:0:0,-0.90309,-10 0/0:28.1955:4:4:139:0:0:0,-1.20412,-10 0/0:82.3809:22:22:831:0:0:0,-6.62266,-10 0/0:73.35:19:19:712:0:0:0,-5.71957,-10 0/0:70.3397:18:18:682:0:0:0,-5.41854,-10 0/0:64.3191:16:16:599:0:0:0,-4.81648,-10 0/0:91.4117:25:25:935:0:0:0,-7.52575,-10 0/0:22.1749:2:2:75:0:0:0,-0.60206,-7.125 0/0:46.2573:10:10:355:0:0:0,-3.0103,-10 0/0:43.247:9:9:297:0:0:0,-2.70927,-10 0/0:37.2264:7:7:265:0:0:0,-2.10721,-10 0/0:46.2573:10:10:365:0:0:0,-3.0103,-10 0/0:49.2676:11:11:418:0:0:0,-3.31133,-10 0/0:46.2573:10:10:376:0:0:0,-3.0103,-10 scaffold_67 1034642 . A T 649.052 . AB=0.586957;ABP=6.03148;AC=2;AF=0.0108696;AN=184;AO=29;CIGAR=1X;DP=1539;DPB=1539;DPRA=1.22222;EPP=3.68421;EPPR=6.75814;GTI=2;LEN=1;MEANALT=1;MQM=59.5862;MQMR=59.9987;NS=92;NUMALT=1;ODDS=0.125443;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1042;QR=55681;RO=1507;RPP=65.983;RPPR=3258.07;RUN=1;SAF=13;SAP=3.68421;SAR=16;SRF=777;SRP=6.1933;SRR=730;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.3061:14:14:518:0:0:0,-4.21442,-10 0/0:32.2237:6:6:228:0:0:0,-1.80618,-10 0/0:62.3267:16:16:598:0:0:0,-4.81648,-10 0/0:35.234:7:7:263:0:0:0,-2.10721,-10 0/0:53.2958:13:13:493:0:0:0,-3.91339,-10 0/0:47.2752:11:11:417:0:0:0,-3.31133,-10 0/0:60.4611:24:23:872:1:15:0,-4.34451,-10 0/1:0.100574:16:0:0:16:581:-10,-4.81648,0 0/0:50.2855:12:12:455:0:0:0,-3.61236,-10 0/0:23.1928:3:3:113:0:0:0,-0.90309,-10 0/0:35.234:7:7:262:0:0:0,-2.10721,-10 0/0:35.234:7:7:263:0:0:0,-2.10721,-10 0/0:68.3473:18:18:682:0:0:0,-5.41854,-10 0/1:99:30:19:720:11:408:-10,0,-10 0/0:86.409:24:24:895:0:0:0,-7.22472,-10 0/0:95.4387:27:27:1003:0:0:0,-8.12781,-10 0/0:62.3267:16:16:603:0:0:0,-4.81648,-10 0/0:29.2134:5:5:185:0:0:0,-1.50515,-10 0/0:71.3576:19:19:673:0:0:0,-5.71957,-10 0/0:99:35:35:1317:0:0:0,-10,-10 0/0:62.3267:16:16:598:0:0:0,-4.81648,-10 0/0:95.4387:27:27:976:0:0:0,-8.12781,-10 0/0:2.55505:11:10:377:1:38:-1.53006,0,-10 0/0:59.3164:15:15:543:0:0:0,-4.51545,-10 0/0:83.3988:23:23:869:0:0:0,-6.92369,-10 0/0:83.3988:23:23:862:0:0:0,-6.92369,-10 0/0:68.3473:18:18:643:0:0:0,-5.41854,-10 0/0:47.2752:11:11:418:0:0:0,-3.31133,-10 0/0:83.3988:23:23:869:0:0:0,-6.92369,-10 0/0:99:36:35:1275:0:0:0,-10,-10 0/0:38.2443:8:8:299:0:0:0,-2.40824,-10 0/0:59.3164:15:15:565:0:0:0,-4.51545,-10 0/0:62.3267:16:16:571:0:0:0,-4.81648,-10 0/0:32.2237:6:6:228:0:0:0,-1.80618,-10 0/0:71.3576:19:19:668:0:0:0,-5.71957,-10 0/0:23.1928:3:3:101:0:0:0,-0.90309,-9.42667 0/0:38.2443:8:8:300:0:0:0,-2.40824,-10 0/0:95.4387:27:27:998:0:0:0,-8.12781,-10 0/0:77.3782:21:21:776:0:0:0,-6.32163,-10 0/0:74.3679:20:20:758:0:0:0,-6.0206,-10 0/0:99:35:35:1279:0:0:0,-10,-10 0/0:53.2958:13:13:455:0:0:0,-3.91339,-10 0/0:50.2855:12:12:443:0:0:0,-3.61236,-10 0/0:74.3679:20:20:756:0:0:0,-6.0206,-10 0/0:77.3782:22:21:773:0:0:0,-6.32163,-10 0/0:35.234:7:7:266:0:0:0,-2.10721,-10 0/0:98.4477:28:28:1025:0:0:0,-8.42884,-10 0/0:62.3267:16:16:595:0:0:0,-4.81648,-10 0/0:59.3164:15:15:540:0:0:0,-4.51545,-10 0/0:98.4477:28:28:1033:0:0:0,-8.42884,-10 0/0:62.3267:16:16:604:0:0:0,-4.81648,-10 0/0:99:32:32:1133:0:0:0,-9.63296,-10 0/0:47.2752:11:11:388:0:0:0,-3.31133,-10 0/0:23.1928:3:3:113:0:0:0,-0.90309,-10 0/0:89.4182:25:25:897:0:0:0,-7.52575,-10 0/0:50.2855:12:12:456:0:0:0,-3.61236,-10 0/0:68.3473:18:18:677:0:0:0,-5.41854,-10 0/0:23.1928:3:3:92:0:0:0,-0.90309,-8.58667 0/0:47.2752:11:11:396:0:0:0,-3.31133,-10 0/0:53.2958:13:13:493:0:0:0,-3.91339,-10 0/0:99:38:38:1422:0:0:0,-10,-10 0/0:59.3164:15:15:569:0:0:0,-4.51545,-10 0/0:92.4291:26:26:962:0:0:0,-7.82678,-10 0/0:71.3576:19:19:660:0:0:0,-5.71957,-10 0/0:62.3267:16:16:608:0:0:0,-4.81648,-10 0/0:99:31:31:1160:0:0:0,-9.33193,-10 0/0:50.2855:12:12:432:0:0:0,-3.61236,-10 0/0:50.2855:12:12:427:0:0:0,-3.61236,-10 0/0:83.3988:23:23:843:0:0:0,-6.92369,-10 0/0:50.2855:12:12:444:0:0:0,-3.61236,-10 0/0:35.234:7:7:265:0:0:0,-2.10721,-10 0/0:95.4387:27:27:1001:0:0:0,-8.12781,-10 0/0:71.3576:19:19:721:0:0:0,-5.71957,-10 0/0:53.2958:13:13:490:0:0:0,-3.91339,-10 0/0:95.4387:27:27:979:0:0:0,-8.12781,-10 0/0:47.2752:11:11:418:0:0:0,-3.31133,-10 0/0:35.234:7:7:253:0:0:0,-2.10721,-10 0/0:47.2752:11:11:415:0:0:0,-3.31133,-10 0/0:35.234:7:7:256:0:0:0,-2.10721,-10 0/0:35.234:7:7:253:0:0:0,-2.10721,-10 0/0:99:37:37:1356:0:0:0,-10,-10 0/0:83.3988:23:23:863:0:0:0,-6.92369,-10 0/0:89.4182:25:25:921:0:0:0,-7.52575,-10 0/0:86.409:24:24:876:0:0:0,-7.22472,-10 0/0:65.337:18:17:619:0:0:0,-5.11751,-10 0/0:29.2134:5:5:184:0:0:0,-1.50515,-10 0/0:74.3679:20:20:726:0:0:0,-6.0206,-10 0/0:44.2649:10:10:366:0:0:0,-3.0103,-10 0/0:26.2031:4:4:145:0:0:0,-1.20412,-10 0/0:41.2546:9:9:342:0:0:0,-2.70927,-10 0/0:56.3061:14:14:518:0:0:0,-4.21442,-10 0/0:56.3061:14:14:519:0:0:0,-4.21442,-10 scaffold_67 1477970 . G A 183.056 . AB=0.5625;ABP=3.55317;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=1835;DPB=1835;DPRA=1.10553;EPP=3.87889;EPPR=12.2295;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=11.0506;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=324;QR=66794;RO=1824;RPP=24.725;RPPR=3937.76;RUN=1;SAF=4;SAP=3.87889;SAR=6;SRF=959;SRP=13.5296;SRR=865;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.0953:12:12:433:0:0:0,-3.61236,-10 0/0:66.0542:8:8:304:0:0:0,-2.40824,-10 0/1:99:16:7:266:9:309:-10,0,-10 0/0:75.085:11:11:406:0:0:0,-3.31133,-10 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:96.1568:18:18:670:0:0:0,-5.41854,-10 0/0:99:42:42:1546:0:0:0,-10,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/0:69.0645:9:9:324:0:0:0,-2.70927,-10 0/0:47.9924:2:2:76:0:0:0,-0.60206,-7.22 0/0:66.0542:8:8:299:0:0:0,-2.40824,-10 0/0:57.0233:5:5:189:0:0:0,-1.50515,-10 0/0:99:32:32:1201:0:0:0,-9.63296,-10 0/0:98.3858:28:27:994:1:15:0,-5.48168,-10 0/0:99:27:27:943:0:0:0,-8.12781,-10 0/0:99:30:30:1044:0:0:0,-9.0309,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:78.0953:12:12:422:0:0:0,-3.61236,-10 0/0:99:23:23:861:0:0:0,-6.92369,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:96.1568:18:18:672:0:0:0,-5.41854,-10 0/0:99:39:39:1470:0:0:0,-10,-10 0/0:81.1055:13:13:484:0:0:0,-3.91339,-10 0/0:99:19:19:672:0:0:0,-5.71957,-10 0/0:99:28:28:1047:0:0:0,-8.42884,-10 0/0:99:33:33:1163:0:0:0,-9.93399,-10 0/0:99:20:20:715:0:0:0,-6.0206,-10 0/0:93.1467:17:17:627:0:0:0,-5.11751,-10 0/0:93.1467:17:17:633:0:0:0,-5.11751,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:63.0439:7:7:259:0:0:0,-2.10721,-10 0/0:66.0542:8:8:278:0:0:0,-2.40824,-10 0/0:93.1467:17:17:613:0:0:0,-5.11751,-10 0/0:66.0542:8:8:304:0:0:0,-2.40824,-10 0/0:99:24:24:884:0:0:0,-7.22472,-10 0/0:66.0542:8:8:300:0:0:0,-2.40824,-10 0/0:63.0439:7:7:256:0:0:0,-2.10721,-10 0/0:99:33:33:1244:0:0:0,-9.93399,-10 0/0:81.1055:13:13:478:0:0:0,-3.91339,-10 0/0:84.116:14:14:468:0:0:0,-4.21442,-10 0/0:99:34:34:1227:0:0:0,-10,-10 0/0:75.085:11:11:393:0:0:0,-3.31133,-10 0/0:90.1365:16:16:605:0:0:0,-4.81648,-10 0/0:99:20:20:739:0:0:0,-6.0206,-10 0/0:99:23:23:786:0:0:0,-6.92369,-10 0/0:87.1262:15:15:570:0:0:0,-4.51545,-10 0/0:99:50:50:1860:0:0:0,-10,-10 0/0:99:19:19:700:0:0:0,-5.71957,-10 0/0:99:21:21:781:0:0:0,-6.32163,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:75.085:11:11:378:0:0:0,-3.31133,-10 0/0:99:29:29:1015:0:0:0,-8.72987,-10 0/0:72.0748:11:10:372:0:0:0,-3.0103,-10 0/0:87.1262:15:15:565:0:0:0,-4.51545,-10 0/0:99:47:47:1741:0:0:0,-10,-10 0/0:69.0645:9:9:341:0:0:0,-2.70927,-10 0/0:99:25:25:888:0:0:0,-7.52575,-10 0/0:60.0336:6:6:227:0:0:0,-1.80618,-10 0/0:93.1467:17:17:645:0:0:0,-5.11751,-10 0/0:90.1365:16:16:586:0:0:0,-4.81648,-10 0/0:99:44:44:1635:0:0:0,-10,-10 0/0:99:27:27:956:0:0:0,-8.12781,-10 0/0:99:40:40:1456:0:0:0,-10,-10 0/0:99:24:24:872:0:0:0,-7.22472,-10 0/0:96.1568:18:18:652:0:0:0,-5.41854,-10 0/0:99:22:22:828:0:0:0,-6.62266,-10 0/0:87.1262:15:15:514:0:0:0,-4.51545,-10 0/0:81.1055:13:13:470:0:0:0,-3.91339,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:72.0748:10:10:353:0:0:0,-3.0103,-10 0/0:84.116:14:14:521:0:0:0,-4.21442,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:99:26:26:950:0:0:0,-7.82678,-10 0/0:90.1365:16:16:601:0:0:0,-4.81648,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:90.1365:16:16:581:0:0:0,-4.81648,-10 0/0:99:19:19:662:0:0:0,-5.71957,-10 0/0:72.0748:10:10:333:0:0:0,-3.0103,-10 0/0:54.013:4:4:152:0:0:0,-1.20412,-10 0/0:69.0645:9:9:337:0:0:0,-2.70927,-10 0/0:99:20:20:752:0:0:0,-6.0206,-10 0/0:99:28:28:1034:0:0:0,-8.42884,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:90.1365:16:16:585:0:0:0,-4.81648,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:69.0645:9:9:319:0:0:0,-2.70927,-10 0/0:99:19:19:662:0:0:0,-5.71957,-10 0/0:81.1055:13:13:494:0:0:0,-3.91339,-10 0/0:66.0542:8:8:297:0:0:0,-2.40824,-10 0/0:93.1467:17:17:640:0:0:0,-5.11751,-10 0/0:99:26:26:919:0:0:0,-7.82678,-10 0/0:72.0748:10:10:377:0:0:0,-3.0103,-10 scaffold_67 1692904 . C T 477.484 . AB=0.44186;ABP=4.27278;AC=2;AF=0.0108696;AN=184;AO=19;CIGAR=1X;DP=1214;DPB=1214;DPRA=1.65243;EPP=3.12459;EPPR=3.01212;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=4.79395;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=714;QR=43818;RO=1195;RPP=44.2683;RPPR=2597.92;RUN=1;SAF=9;SAP=3.12459;SAR=10;SRF=597;SRP=3.01212;SRR=598;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.0216:12:12:452:0:0:0,-3.61236,-10 0/0:38.9701:7:7:213:0:0:0,-2.10721,-10 0/0:54.0216:12:12:443:0:0:0,-3.61236,-10 0/0:51.0113:11:11:418:0:0:0,-3.31133,-10 0/0:41.9804:8:8:302:0:0:0,-2.40824,-10 0/0:41.9804:8:8:280:0:0:0,-2.40824,-10 0/0:75.0937:19:19:714:0:0:0,-5.71957,-10 0/0:81.1143:21:21:779:0:0:0,-6.32163,-10 0/0:44.9907:9:9:323:0:0:0,-2.70927,-10 0/0:29.9392:4:4:152:0:0:0,-1.20412,-10 0/0:38.9701:7:7:264:0:0:0,-2.10721,-10 0/0:32.9495:5:5:189:0:0:0,-1.50515,-10 0/0:87.1347:23:23:796:0:0:0,-6.92369,-10 0/0:99:31:31:1114:0:0:0,-9.33193,-10 0/0:96.1646:26:26:936:0:0:0,-7.82678,-10 0/0:87.1347:23:23:859:0:0:0,-6.92369,-10 0/0:72.0834:18:18:683:0:0:0,-5.41854,-10 0/0:51.0113:11:11:416:0:0:0,-3.31133,-10 0/0:51.0113:11:11:416:0:0:0,-3.31133,-10 0/0:93.1549:25:25:939:0:0:0,-7.52575,-10 0/0:51.0113:11:11:416:0:0:0,-3.31133,-10 0/1:99:19:10:375:9:342:-10,0,-10 0/0:44.9907:9:9:338:0:0:0,-2.70927,-10 0/0:51.0113:11:11:406:0:0:0,-3.31133,-10 0/0:51.0113:11:11:403:0:0:0,-3.31133,-10 0/0:51.0113:11:11:399:0:0:0,-3.31133,-10 0/0:63.0525:15:15:559:0:0:0,-4.51545,-10 0/0:41.9804:8:8:253:0:0:0,-2.40824,-10 0/0:72.0834:18:18:664:0:0:0,-5.41854,-10 0/0:72.0834:18:18:648:0:0:0,-5.41854,-10 0/0:20.9083:1:1:38:0:0:0,-0.30103,-3.8 0/0:29.9392:4:4:152:0:0:0,-1.20412,-10 0/0:48.001:10:10:347:0:0:0,-3.0103,-10 0/0:32.9495:5:5:190:0:0:0,-1.50515,-10 0/0:57.0319:13:13:483:0:0:0,-3.91339,-10 0/0:32.9495:5:5:186:0:0:0,-1.50515,-10 0/0:41.9804:8:8:281:0:0:0,-2.40824,-10 0/0:93.1549:25:25:920:0:0:0,-7.52575,-10 0/0:32.9495:5:5:185:0:0:0,-1.50515,-10 0/0:41.9804:8:8:296:0:0:0,-2.40824,-10 0/0:87.1347:23:23:858:0:0:0,-6.92369,-10 0/0:57.0319:13:13:494:0:0:0,-3.91339,-10 0/0:35.9598:6:6:183:0:0:0,-1.80618,-10 0/0:72.0834:18:18:675:0:0:0,-5.41854,-10 0/0:57.0319:13:13:489:0:0:0,-3.91339,-10 0/0:66.0628:16:16:575:0:0:0,-4.81648,-10 0/0:72.0834:18:18:640:0:0:0,-5.41854,-10 0/0:60.0422:14:14:521:0:0:0,-4.21442,-10 0/0:41.9804:8:8:282:0:0:0,-2.40824,-10 0/0:96.1646:26:26:977:0:0:0,-7.82678,-10 0/0:44.9907:9:9:312:0:0:0,-2.70927,-10 0/0:93.1549:25:25:920:0:0:0,-7.52575,-10 0/0:35.9598:6:6:228:0:0:0,-1.80618,-10 0/0:35.9598:6:6:202:0:0:0,-1.80618,-10 0/0:72.0834:18:18:667:0:0:0,-5.41854,-10 0/0:57.0319:13:13:490:0:0:0,-3.91339,-10 0/0:66.0628:16:16:589:0:0:0,-4.81648,-10 0/0:48.001:10:10:372:0:0:0,-3.0103,-10 0/0:63.0525:15:15:552:0:0:0,-4.51545,-10 0/0:32.9495:5:5:188:0:0:0,-1.50515,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:38.9701:7:7:260:0:0:0,-2.10721,-10 0/0:57.0319:13:13:482:0:0:0,-3.91339,-10 0/0:38.9701:7:7:266:0:0:0,-2.10721,-10 0/0:44.9907:9:9:330:0:0:0,-2.70927,-10 0/1:99:24:14:523:10:372:-10,0,-10 0/0:69.0731:17:17:617:0:0:0,-5.11751,-10 0/0:26.9289:3:3:114:0:0:0,-0.90309,-10 0/0:99:29:29:1073:0:0:0,-8.72987,-10 0/0:44.9907:9:9:324:0:0:0,-2.70927,-10 0/0:41.9804:8:8:295:0:0:0,-2.40824,-10 0/0:78.104:20:20:695:0:0:0,-6.0206,-10 0/0:57.0319:13:13:483:0:0:0,-3.91339,-10 0/0:66.0628:16:16:607:0:0:0,-4.81648,-10 0/0:75.0937:19:19:684:0:0:0,-5.71957,-10 0/0:41.9804:8:8:304:0:0:0,-2.40824,-10 0/0:35.9598:6:6:228:0:0:0,-1.80618,-10 0/0:48.001:10:10:379:0:0:0,-3.0103,-10 0/0:26.9289:3:3:113:0:0:0,-0.90309,-10 0/0:60.0422:14:14:446:0:0:0,-4.21442,-10 0/0:96.1646:26:26:950:0:0:0,-7.82678,-10 0/0:93.1549:25:25:895:0:0:0,-7.52575,-10 0/0:48.001:10:10:380:0:0:0,-3.0103,-10 0/0:66.0628:16:16:599:0:0:0,-4.81648,-10 0/0:54.0216:12:12:449:0:0:0,-3.61236,-10 0/0:44.9907:9:9:331:0:0:0,-2.70927,-10 0/0:48.001:10:10:368:0:0:0,-3.0103,-10 0/0:48.001:10:10:376:0:0:0,-3.0103,-10 0/0:29.9392:4:4:138:0:0:0,-1.20412,-10 0/0:66.0628:16:16:599:0:0:0,-4.81648,-10 0/0:63.0525:15:15:534:0:0:0,-4.51545,-10 0/0:48.001:10:10:357:0:0:0,-3.0103,-10 scaffold_67 1706450 . C G 2637.58 . AB=0.525;ABP=3.66174;AC=8;AF=0.043956;AN=182;AO=104;CIGAR=1X;DP=1994;DPB=1994;DPRA=1.06101;EPP=3.09382;EPPR=4.41848;GTI=1;LEN=1;MEANALT=1;MQM=52.4327;MQMR=58.6548;NS=91;NUMALT=1;ODDS=3.26061;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3685;QR=68901;RO=1889;RPP=228.843;RPPR=4104.92;RUN=1;SAF=51;SAP=3.09382;SAR=53;SRF=927;SRP=4.41848;SRR=962;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:98.6755:29:29:1037:0:0:0,-8.72987,-10 0/0:38.4693:9:9:334:0:0:0,-2.70927,-10 0/0:99:30:30:1118:0:0:0,-9.0309,-10 0/0:53.5208:14:14:523:0:0:0,-4.21442,-10 0/1:99:15:9:325:6:224:-10,0,-10 0/0:35.459:8:8:286:0:0:0,-2.40824,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:92.6548:27:27:987:0:0:0,-8.12781,-10 0/0:62.5517:17:17:636:0:0:0,-5.11751,-10 0/0:26.4281:5:5:187:0:0:0,-1.50515,-10 0/0:29.4384:6:6:203:0:0:0,-1.80618,-10 0/0:29.4384:6:6:198:0:0:0,-1.80618,-10 1/1:79.9543:40:0:0:40:1378:-10,-10,0 0/0:99:35:35:1267:0:0:0,-10,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:68.5723:19:19:700:0:0:0,-5.71957,-10 0/0:95.6615:28:28:976:0:0:0,-8.42884,-10 0/0:35.459:8:8:295:0:0:0,-2.40824,-10 0/0:77.6032:22:22:786:0:0:0,-6.62266,-10 0/0:99:34:34:1267:0:0:0,-10,-10 0/0:59.5414:16:16:599:0:0:0,-4.81648,-10 0/0:99:47:47:1686:0:0:0,-10,-10 0/0:44.4899:11:11:381:0:0:0,-3.31133,-10 0/0:89.6435:26:26:936:0:0:0,-7.82678,-10 0/0:83.6236:24:24:893:0:0:0,-7.22472,-10 0/0:99:40:40:1448:0:0:0,-10,-10 0/0:77.6032:22:22:832:0:0:0,-6.62266,-10 0/0:44.4899:11:11:385:0:0:0,-3.31133,-10 0/0:83.6236:24:24:895:0:0:0,-7.22472,-10 0/0:99:48:48:1724:0:0:0,-10,-10 .:.:.:.:.:.:.:. 0/0:41.4796:10:10:365:0:0:0,-3.0103,-10 0/0:62.5517:17:17:638:0:0:0,-5.11751,-10 0/0:65.562:18:18:650:0:0:0,-5.41854,-10 0/0:95.6615:28:28:1029:0:0:0,-8.42884,-10 0/0:26.4281:5:5:171:0:0:0,-1.50515,-10 0/0:26.4281:5:5:168:0:0:0,-1.50515,-10 0/0:99:33:33:1163:0:0:0,-9.93399,-10 0/0:77.6032:22:22:793:0:0:0,-6.62266,-10 0/0:47.5002:12:12:420:0:0:0,-3.61236,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:80.6134:23:23:856:0:0:0,-6.92369,-10 0/0:74.5929:21:21:762:0:0:0,-6.32163,-10 0/0:99:36:36:1331:0:0:0,-10,-10 0/1:99:16:9:331:7:254:-10,0,-10 0/0:56.5311:15:15:540:0:0:0,-4.51545,-10 0/0:99:58:58:2115:0:0:0,-10,-10 0/0:68.5723:19:19:705:0:0:0,-5.71957,-10 0/0:68.5723:19:19:705:0:0:0,-5.71957,-10 0/0:99:42:42:1553:0:0:0,-10,-10 0/0:50.5105:13:13:491:0:0:0,-3.91339,-10 0/0:99:35:35:1317:0:0:0,-10,-10 0/0:35.459:8:8:302:0:0:0,-2.40824,-10 0/0:35.459:8:8:304:0:0:0,-2.40824,-10 0/0:99:41:41:1435:0:0:0,-10,-10 0/0:77.6032:22:22:818:0:0:0,-6.62266,-10 0/0:74.5929:21:21:769:0:0:0,-6.32163,-10 0/1:0.16111:7:0:0:7:265:-10,-2.10721,0 0/0:80.6134:23:23:862:0:0:0,-6.92369,-10 0/0:59.5414:16:16:579:0:0:0,-4.81648,-10 0/0:99:36:36:1355:0:0:0,-10,-10 0/0:71.5826:20:20:755:0:0:0,-6.0206,-10 0/0:99:41:41:1497:0:0:0,-10,-10 0/0:74.5929:21:21:752:0:0:0,-6.32163,-10 0/0:29.4384:6:6:221:0:0:0,-1.80618,-10 0/1:99:32:15:531:17:584:-10,0,-10 0/0:77.6032:22:22:820:0:0:0,-6.62266,-10 0/0:32.4487:7:7:266:0:0:0,-2.10721,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:41.4796:10:10:368:0:0:0,-3.0103,-10 0/0:62.5517:17:17:600:0:0:0,-5.11751,-10 0/0:99:32:32:1118:0:0:0,-9.63296,-10 0/0:99:30:30:1092:0:0:0,-9.0309,-10 0/0:89.6435:26:26:958:0:0:0,-7.82678,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:68.5723:19:19:682:0:0:0,-5.71957,-10 0/0:62.5517:17:17:632:0:0:0,-5.11751,-10 0/0:53.5208:14:14:521:0:0:0,-4.21442,-10 0/0:41.4796:10:10:367:0:0:0,-3.0103,-10 0/0:44.4899:11:11:386:0:0:0,-3.31133,-10 0/0:99:38:38:1400:0:0:0,-10,-10 0/1:99:25:19:696:6:216:-10,0,-10 0/0:68.5723:20:19:694:0:0:0,-5.71957,-10 0/0:71.5826:20:20:730:0:0:0,-6.0206,-10 0/1:99:25:5:178:20:726:-10,0,-10 0/0:32.4487:7:7:231:0:0:0,-2.10721,-10 0/0:71.5826:20:20:714:0:0:0,-6.0206,-10 0/0:56.5311:15:15:548:0:0:0,-4.51545,-10 0/0:29.4384:6:6:228:0:0:0,-1.80618,-10 0/0:37.7299:25:24:847:1:38:0,-2.32781,-10 0/0:47.5002:12:12:435:0:0:0,-3.61236,-10 0/0:77.6032:22:22:787:0:0:0,-6.62266,-10 scaffold_67 1941306 . T C 379.309 . AB=0.516129;ABP=3.08035;AC=1;AF=0.00549451;AN=182;AO=16;CIGAR=1X;DP=1339;DPB=1339;DPRA=2.13303;EPP=3.55317;EPPR=3.33224;GTI=0;LEN=1;MEANALT=1;MQM=59.3125;MQMR=59.9841;NS=91;NUMALT=1;ODDS=4.90354;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=574;QR=49221;RO=1322;RPP=37.7539;RPPR=2839.06;RUN=1;SAF=7;SAP=3.55317;SAR=9;SRF=658;SRP=3.06943;SRR=664;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.5517:12:12:432:0:0:0,-3.61236,-10 0/0:57.5929:16:16:601:0:0:0,-4.81648,-10 0/0:72.6444:21:21:785:0:0:0,-6.32163,-10 0/0:30.5002:7:7:262:0:0:0,-2.10721,-10 0/0:51.5723:14:14:528:0:0:0,-4.21442,-10 0/0:48.562:13:13:491:0:0:0,-3.91339,-10 0/0:69.6341:20:20:716:0:0:0,-6.0206,-10 0/0:42.5414:11:11:402:0:0:0,-3.31133,-10 0/0:60.6032:17:17:628:0:0:0,-5.11751,-10 0/0:24.4796:5:5:190:0:0:0,-1.50515,-10 0/0:24.4796:5:5:190:0:0:0,-1.50515,-10 0/0:24.4796:5:5:189:0:0:0,-1.50515,-10 0/0:78.665:23:23:838:0:0:0,-6.92369,-10 0/0:66.6238:19:19:713:0:0:0,-5.71957,-10 0/0:99:32:32:1209:0:0:0,-9.63296,-10 0/0:72.6444:21:21:760:0:0:0,-6.32163,-10 0/0:87.6956:26:26:985:0:0:0,-7.82678,-10 0/0:48.562:13:13:491:0:0:0,-3.91339,-10 0/0:66.6238:19:19:721:0:0:0,-5.71957,-10 0/0:84.6854:25:25:906:0:0:0,-7.52575,-10 0/0:51.5723:14:14:526:0:0:0,-4.21442,-10 0/0:93.7152:28:28:1051:0:0:0,-8.42884,-10 0/0:30.5002:7:7:266:0:0:0,-2.10721,-10 0/0:45.5517:12:12:456:0:0:0,-3.61236,-10 0/0:66.6238:19:19:685:0:0:0,-5.71957,-10 0/0:51.5723:14:14:532:0:0:0,-4.21442,-10 0/0:39.5311:10:10:374:0:0:0,-3.0103,-10 0/0:33.5105:8:8:291:0:0:0,-2.40824,-10 0/0:45.5517:12:12:444:0:0:0,-3.61236,-10 0/0:72.6444:21:21:788:0:0:0,-6.32163,-10 0/0:33.5105:8:8:304:0:0:0,-2.40824,-10 0/0:27.4899:6:6:228:0:0:0,-1.80618,-10 0/0:45.5517:12:12:451:0:0:0,-3.61236,-10 0/0:42.5414:11:11:416:0:0:0,-3.31133,-10 0/0:60.6032:17:17:642:0:0:0,-5.11751,-10 0/0:24.4796:5:5:179:0:0:0,-1.50515,-10 0/0:39.5311:10:10:379:0:0:0,-3.0103,-10 0/0:75.6547:22:22:824:0:0:0,-6.62266,-10 0/0:45.5517:12:12:438:0:0:0,-3.61236,-10 0/0:45.5517:12:12:449:0:0:0,-3.61236,-10 0/0:72.6444:21:21:795:0:0:0,-6.32163,-10 0/0:54.5826:15:15:569:0:0:0,-4.51545,-10 0/0:39.5311:10:10:380:0:0:0,-3.0103,-10 0/0:87.6956:26:26:954:0:0:0,-7.82678,-10 0/0:48.562:13:13:492:0:0:0,-3.91339,-10 0/0:36.5208:9:9:342:0:0:0,-2.70927,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:42.5414:11:11:417:0:0:0,-3.31133,-10 0/0:39.5311:10:10:380:0:0:0,-3.0103,-10 0/0:90.7056:27:27:1020:0:0:0,-8.12781,-10 0/0:42.5414:11:11:413:0:0:0,-3.31133,-10 0/0:93.7152:28:28:1035:0:0:0,-8.42884,-10 0/0:36.5208:9:9:332:0:0:0,-2.70927,-10 0/0:21.4693:4:4:152:0:0:0,-1.20412,-10 0/0:66.6238:19:19:707:0:0:0,-5.71957,-10 0/0:51.5723:14:14:518:0:0:0,-4.21442,-10 0/0:48.562:13:13:478:0:0:0,-3.91339,-10 0/0:30.5002:7:7:266:0:0:0,-2.10721,-10 0/0:39.5311:10:10:378:0:0:0,-3.0103,-10 0/0:36.5208:9:9:341:0:0:0,-2.70927,-10 0/0:81.6752:24:24:898:0:0:0,-7.22472,-10 0/0:42.5414:11:11:418:0:0:0,-3.31133,-10 0/0:75.6547:22:22:784:0:0:0,-6.62266,-10 0/0:48.562:13:13:469:0:0:0,-3.91339,-10 0/0:42.5414:11:11:404:0:0:0,-3.31133,-10 0/1:99:31:15:563:16:574:-10,0,-10 0/0:69.6341:20:20:740:0:0:0,-6.0206,-10 0/0:30.5002:7:7:266:0:0:0,-2.10721,-10 0/0:87.6956:26:26:966:0:0:0,-7.82678,-10 0/0:24.4796:6:5:190:0:0:0,-1.50515,-10 0/0:36.5208:9:9:331:0:0:0,-2.70927,-10 0/0:81.6752:24:24:869:0:0:0,-7.22472,-10 0/0:57.5929:16:16:577:0:0:0,-4.81648,-10 0/0:24.4796:5:5:190:0:0:0,-1.50515,-10 0/0:42.5414:11:11:409:0:0:0,-3.31133,-10 0/0:39.5311:10:10:375:0:0:0,-3.0103,-10 0/0:54.5826:15:15:564:0:0:0,-4.51545,-10 0/0:42.5414:11:11:417:0:0:0,-3.31133,-10 .:.:.:.:.:.:.:. 0/0:45.5517:12:12:444:0:0:0,-3.61236,-10 0/0:78.665:23:23:846:0:0:0,-6.92369,-10 0/0:69.6341:20:20:745:0:0:0,-6.0206,-10 0/0:57.5929:16:16:605:0:0:0,-4.81648,-10 0/0:48.562:13:13:485:0:0:0,-3.91339,-10 0/0:66.6238:19:19:691:0:0:0,-5.71957,-10 0/0:36.5208:9:9:342:0:0:0,-2.70927,-10 0/0:60.6032:17:17:622:0:0:0,-5.11751,-10 0/0:45.5517:12:12:456:0:0:0,-3.61236,-10 0/0:27.4899:6:6:225:0:0:0,-1.80618,-10 0/0:45.5517:12:12:449:0:0:0,-3.61236,-10 0/0:54.5826:15:15:568:0:0:0,-4.51545,-10 0/0:48.562:13:13:470:0:0:0,-3.91339,-10 scaffold_67 2088530 . TA T 902.241 . AB=0.655172;ABP=15.1406;AC=4;AF=0.0217391;AN=184;AO=38;CIGAR=1M1D1M;DP=1160;DPB=1147.67;DPRA=1.15789;EPP=3.23888;EPPR=7.50139;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9964;NS=92;NUMALT=1;ODDS=2.95902;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=19;PQR=19;PRO=0.5;QA=1345;QR=40786;RO=1114;RPP=85.5263;RPPR=2413.35;RUN=1;SAF=20;SAP=3.23888;SAR=18;SRF=532;SRP=7.88344;SRR=582;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:49.7966:13:13:492:0:0:0,-3.91339,-10 0|0:52.8069:14:14:529:0:0:0,-4.21442,-10 0|0:49.7966:13:13:452:0:0:0,-3.91339,-10 0|0:49.7966:13:13:471:0:0:0,-3.91339,-10 0|0:37.7554:9:9:315:0:0:0,-2.70927,-10 0|0:19.6936:3:3:114:0:0:0,-0.90309,-10 0|0:73.879:21:21:750:0:0:0,-6.32163,-10 0|0:46.7863:12:12:436:0:0:0,-3.61236,-10 0|0:58.8275:16:16:605:0:0:0,-4.81648,-10 0|0:22.7039:4:4:150:0:0:0,-1.20412,-10 0|0:22.7039:4:4:133:0:0:0,-1.20412,-10 0|0:19.6936:3:3:97:0:0:0,-0.90309,-9.05333 0|0:58.8275:16:16:566:0:0:0,-4.81648,-10 0|0:79.8996:23:23:866:0:0:0,-6.92369,-10 0|0:49.7966:13:13:483:0:0:0,-3.91339,-10 0|0:40.7657:10:10:364:0:0:0,-3.0103,-10 0|0:55.8172:15:15:544:0:0:0,-4.51545,-10 0|1:0.0165901:9:0:0:9:320:-10,-2.70927,0 0|0:52.8069:14:14:518:0:0:0,-4.21442,-10 0|0:91.9403:27:27:984:0:0:0,-8.12781,-10 0|0:58.8275:16:16:579:0:0:0,-4.81648,-10 0|0:73.879:21:21:767:0:0:0,-6.32163,-10 0|0:25.7142:5:5:178:0:0:0,-1.50515,-10 0|0:49.7966:13:13:483:0:0:0,-3.91339,-10 0|0:46.7863:12:12:441:0:0:0,-3.61236,-10 0|0:64.8481:19:18:672:0:0:0,-5.41854,-10 0|0:34.7451:8:8:303:0:0:0,-2.40824,-10 0|0:22.7039:4:4:146:0:0:0,-1.20412,-10 0|0:55.8172:15:15:557:0:0:0,-4.51545,-10 0|0:85.9201:26:25:914:0:0:0,-7.52575,-10 0|0:25.7142:5:5:174:0:0:0,-1.50515,-10 0|0:31.7348:7:7:251:0:0:0,-2.10721,-10 0|0:64.8481:18:18:637:0:0:0,-5.41854,-10 0|0:40.7657:10:10:380:0:0:0,-3.0103,-10 0|0:49.7966:14:13:481:0:0:0,-3.91339,-10 0|0:19.6936:3:3:112:0:0:0,-0.90309,-10 0|0:37.7554:9:9:322:0:0:0,-2.70927,-10 0|0:58.8275:16:16:589:0:0:0,-4.81648,-10 0|0:34.7451:8:8:303:0:0:0,-2.40824,-10 0|0:55.8172:15:15:568:0:0:0,-4.51545,-10 0|0:79.8996:23:23:855:0:0:0,-6.92369,-10 0|0:49.7966:14:13:460:0:0:0,-3.91339,-10 0|0:31.7348:7:7:264:0:0:0,-2.10721,-10 0|0:76.8893:22:22:805:0:0:0,-6.62266,-10 0|0:52.8069:14:14:520:0:0:0,-4.21442,-10 0|0:49.7966:13:13:470:0:0:0,-3.91339,-10 0|0:97.9596:29:29:1001:0:0:0,-8.72987,-10 0|0:64.8481:18:18:671:0:0:0,-5.41854,-10 0|0:40.7657:10:10:368:0:0:0,-3.0103,-10 0|0:55.8172:15:15:556:0:0:0,-4.51545,-10 0|0:25.7142:5:5:190:0:0:0,-1.50515,-10 0|0:52.8069:14:14:510:0:0:0,-4.21442,-10 0|0:31.7348:7:7:265:0:0:0,-2.10721,-10 0|0:13.673:1:1:34:0:0:0,-0.30103,-3.4 0|0:91.9403:28:27:1002:0:0:0,-8.12781,-10 0|0:19.6936:3:3:113:0:0:0,-0.90309,-10 0|0:46.7863:12:12:452:0:0:0,-3.61236,-10 0|0:37.7554:9:9:337:0:0:0,-2.70927,-10 0|0:37.7554:10:9:336:0:0:0,-2.70927,-10 0|0:43.776:11:11:390:0:0:0,-3.31133,-10 0|1:99:25:12:420:13:425:-10,0,-10 0|0:31.7348:7:7:263:0:0:0,-2.10721,-10 0|0:73.879:21:21:765:0:0:0,-6.32163,-10 0|1:99:7:3:104:4:145:-10,0,-9.14352 0|0:37.7554:9:9:324:0:0:0,-2.70927,-10 0|0:73.879:21:21:755:0:0:0,-6.32163,-10 0|0:46.7863:12:12:450:0:0:0,-3.61236,-10 0|0:28.7245:6:6:223:0:0:0,-1.80618,-10 0|0:85.9201:26:25:888:0:0:0,-7.52575,-10 0|0:43.776:11:11:399:0:0:0,-3.31133,-10 0|0:37.7554:9:9:334:0:0:0,-2.70927,-10 0|0:40.7657:10:10:375:0:0:0,-3.0103,-10 0|0:76.8893:23:22:789:0:0:0,-6.62266,-10 0|0:34.7451:8:8:303:0:0:0,-2.40824,-10 0|0:76.8893:22:22:781:0:0:0,-6.62266,-10 0|0:25.7142:5:5:184:0:0:0,-1.50515,-10 0|0:40.7657:10:10:374:0:0:0,-3.0103,-10 0|0:37.7554:9:9:331:0:0:0,-2.70927,-10 0|0:19.6936:3:3:114:0:0:0,-0.90309,-10 0|0:16.6833:2:2:76:0:0:0,-0.60206,-7.22 0|0:91.9403:27:27:996:0:0:0,-8.12781,-10 0|0:61.8378:17:17:629:0:0:0,-5.11751,-10 0|0:55.8172:15:15:566:0:0:0,-4.51545,-10 0|0:49.7966:13:13:470:0:0:0,-3.91339,-10 0|1:99:17:5:187:12:455:-10,0,-10 0|0:19.6936:3:3:112:0:0:0,-0.90309,-10 0|0:34.7451:8:8:298:0:0:0,-2.40824,-10 0|0:55.8172:15:15:530:0:0:0,-4.51545,-10 0|0:22.7039:4:4:151:0:0:0,-1.20412,-10 0|0:40.7657:10:10:379:0:0:0,-3.0103,-10 0|0:34.7451:8:8:292:0:0:0,-2.40824,-10 0|0:58.8275:16:16:599:0:0:0,-4.81648,-10 scaffold_67 2352165 . G A 1090.83 . AB=0.414634;ABP=5.60547;AC=3;AF=0.0163043;AN=184;AO=46;CIGAR=1X;DP=2635;DPB=2635;DPRA=1.60871;EPP=4.70971;EPPR=3.19901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9992;NS=92;NUMALT=1;ODDS=4.36531;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1647;QR=94018;RO=2589;RPP=102.898;RPPR=5616.27;RUN=1;SAF=26;SAP=4.70971;SAR=20;SRF=1301;SRP=3.15205;SRR=1288;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:92.7036:23:23:825:0:0:0,-6.92369,-10 0/0:89.694:22:22:779:0:0:0,-6.62266,-10 0/0:99:35:35:1279:0:0:0,-10,-10 0/0:47.5504:8:8:295:0:0:0,-2.40824,-10 0/0:99:28:28:1034:0:0:0,-8.42884,-10 0/0:50.5607:9:9:318:0:0:0,-2.70927,-10 0/0:99:57:57:2118:0:0:0,-10,-10 0/0:99:36:36:1333:0:0:0,-10,-10 0/0:83.6739:20:20:730:0:0:0,-6.0206,-10 0/0:47.5504:8:8:298:0:0:0,-2.40824,-10 0/0:62.6019:13:13:457:0:0:0,-3.91339,-10 0/0:68.6225:15:15:537:0:0:0,-4.51545,-10 0/0:99:40:40:1405:0:0:0,-10,-10 0/0:99:52:52:1823:0:0:0,-10,-10 0/0:99:42:42:1586:0:0:0,-10,-10 0/0:99:43:43:1556:0:0:0,-10,-10 0/0:99:38:38:1372:0:0:0,-10,-10 0/0:68.6225:15:15:551:0:0:0,-4.51545,-10 0/0:99:28:28:984:0:0:0,-8.42884,-10 0/0:99:51:50:1791:1:38:0,-9.84496,-10 0/0:80.6637:19:19:689:0:0:0,-5.71957,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:65.6122:14:14:532:0:0:0,-4.21442,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:99:33:33:1192:0:0:0,-9.93399,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:99:32:32:1190:0:0:0,-9.63296,-10 0/0:65.6122:14:14:523:0:0:0,-4.21442,-10 0/0:98.7274:25:25:938:0:0:0,-7.52575,-10 0/0:99:53:52:1895:1:36:0,-10,-10 0/0:53.571:10:10:380:0:0:0,-3.0103,-10 0/0:50.5607:9:9:333:0:0:0,-2.70927,-10 0/0:99:38:38:1410:0:0:0,-10,-10 0/0:62.6019:13:13:471:0:0:0,-3.91339,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:59.5916:12:12:419:0:0:0,-3.61236,-10 0/0:80.6637:19:19:651:0:0:0,-5.71957,-10 0/0:99:45:45:1621:0:0:0,-10,-10 0/0:99:34:34:1207:0:0:0,-10,-10 0/0:62.6019:13:13:478:0:0:0,-3.91339,-10 0/0:99:46:46:1713:0:0:0,-10,-10 0/0:89.694:22:22:800:0:0:0,-6.62266,-10 0/0:74.6431:17:17:632:0:0:0,-5.11751,-10 0/0:99:41:41:1517:0:0:0,-10,-10 0/0:99:39:39:1442:0:0:0,-10,-10 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:99:71:71:2608:0:0:0,-10,-10 0/0:99:39:39:1441:0:0:0,-10,-10 0/0:77.6534:18:18:641:0:0:0,-5.41854,-10 0/0:99:56:56:1989:0:0:0,-10,-10 0/0:92.7036:23:23:795:0:0:0,-6.92369,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:62.6019:13:13:463:0:0:0,-3.91339,-10 0/0:71.6328:16:16:562:0:0:0,-4.81648,-10 0/0:99:52:51:1824:1:16:0,-10,-10 1/1:19.0135:26:0:0:26:947:-10,-7.82678,0 0/0:92.7036:23:23:858:0:0:0,-6.92369,-10 0/0:74.6431:17:17:641:0:0:0,-5.11751,-10 0/0:95.7125:24:24:863:0:0:0,-7.22472,-10 0/0:80.6637:19:19:706:0:0:0,-5.71957,-10 0/0:99:62:62:2286:0:0:0,-10,-10 0/0:99:26:26:955:0:0:0,-7.82678,-10 0/0:99:34:34:1232:0:0:0,-10,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:74.6431:17:17:603:0:0:0,-5.11751,-10 0/1:99:41:24:870:17:610:-10,0,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:74.6431:17:17:563:0:0:0,-5.11751,-10 0/0:99:44:44:1608:0:0:0,-10,-10 0/0:56.5813:11:11:372:0:0:0,-3.31133,-10 0/0:89.694:22:22:801:0:0:0,-6.62266,-10 0/0:99:32:32:1176:0:0:0,-9.63296,-10 0/0:99:40:40:1409:0:0:0,-10,-10 0/0:99:35:35:1298:0:0:0,-10,-10 0/0:99:39:39:1359:0:0:0,-10,-10 0/0:65.6122:14:14:522:0:0:0,-4.21442,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:56.5813:11:11:404:0:0:0,-3.31133,-10 0/0:62.6019:13:13:494:0:0:0,-3.91339,-10 0/0:95.7125:24:24:860:0:0:0,-7.22472,-10 0/0:99:44:44:1645:0:0:0,-10,-10 0/0:99:38:38:1356:0:0:0,-10,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:99:26:26:926:0:0:0,-7.82678,-10 0/0:99:53:53:1896:0:0:0,-10,-10 0/0:74.6431:17:17:615:0:0:0,-5.11751,-10 0/0:92.7036:23:23:821:0:0:0,-6.92369,-10 0/0:83.6739:20:20:751:0:0:0,-6.0206,-10 0/0:56.5813:11:11:369:0:0:0,-3.31133,-10 0/0:99:30:30:1070:0:0:0,-9.0309,-10 0/0:86.6845:21:21:729:0:0:0,-6.32163,-10 0/0:99:31:31:1132:0:0:0,-9.33193,-10 scaffold_67 2482575 . G A 2006.42 . AB=0.596154;ABP=7.18621;AC=6;AF=0.0326087;AN=184;AO=79;CIGAR=1X;DP=1840;DPB=1840;DPRA=1.14925;EPP=4.35716;EPPR=3.11018;GTI=1;LEN=1;MEANALT=1;MQM=50.2911;MQMR=59.4412;NS=92;NUMALT=1;ODDS=0.422304;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2867;QR=64232;RO=1761;RPP=174.557;RPPR=3826.97;RUN=1;SAF=36;SAP=4.35716;SAR=43;SRF=876;SRP=3.11018;SRR=885;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.7247:18:18:651:0:0:0,-5.41854,-10 0/0:25.6114:7:7:252:0:0:0,-2.10721,-10 0/0:70.7659:22:22:795:0:0:0,-6.62266,-10 0/0:58.7247:18:18:665:0:0:0,-5.41854,-10 0/0:58.7247:18:18:653:0:0:0,-5.41854,-10 0/0:34.6423:10:10:353:0:0:0,-3.0103,-10 0/0:99:35:35:1226:0:0:0,-10,-10 0/0:70.7659:22:22:808:0:0:0,-6.62266,-10 0/0:40.6629:12:12:449:0:0:0,-3.61236,-10 0/0:7.54962:1:1:38:0:0:0,-0.30103,-3.8 0/0:37.6526:11:11:408:0:0:0,-3.31133,-10 0/0:37.6526:11:11:403:0:0:0,-3.31133,-10 0/0:79.7969:25:25:943:0:0:0,-7.52575,-10 0/0:99:33:33:1174:0:0:0,-9.93399,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:97.8548:31:31:1166:0:0:0,-9.33193,-10 0/0:91.8371:29:29:1069:0:0:0,-8.72987,-10 0/0:37.6526:11:11:385:0:0:0,-3.31133,-10 0/0:94.8464:30:30:1115:0:0:0,-9.0309,-10 0/1:99:34:21:792:13:458:-10,0,-10 0/0:49.6938:15:15:558:0:0:0,-4.51545,-10 0/0:97.8548:31:31:1097:0:0:0,-9.33193,-10 0/0:28.6217:8:8:304:0:0:0,-2.40824,-10 0/0:61.735:19:19:597:0:0:0,-5.71957,-10 0/0:73.7762:23:23:853:0:0:0,-6.92369,-10 0/0:88.8272:28:28:1009:0:0:0,-8.42884,-10 0/0:49.6938:15:15:542:0:0:0,-4.51545,-10 0/0:70.7659:22:22:793:0:0:0,-6.62266,-10 0/0:79.7969:25:25:901:0:0:0,-7.52575,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/0:13.5702:3:3:100:0:0:0,-0.90309,-9.33333 0/0:22.6011:6:6:227:0:0:0,-1.80618,-10 0/0:55.7144:17:17:599:0:0:0,-5.11751,-10 0/0:31.632:9:9:322:0:0:0,-2.70927,-10 0/1:1.36983:18:0:0:18:641:-10,-5.41854,0 0/0:22.6011:6:6:204:0:0:0,-1.80618,-10 0/0:27.2059:15:14:527:1:15:0,-1.83936,-10 0/0:79.7969:25:25:926:0:0:0,-7.52575,-10 0/0:49.6938:15:15:564:0:0:0,-4.51545,-10 1/1:19.4621:18:0:0:18:673:-10,-5.41854,0 0/0:99:36:36:1310:0:0:0,-10,-10 0/0:79.7969:25:25:917:0:0:0,-7.52575,-10 0/0:61.735:19:19:714:0:0:0,-5.71957,-10 1/1:52.5754:29:0:0:29:1080:-10,-8.72987,0 0/0:99:35:35:1315:0:0:0,-10,-10 0/0:49.6938:15:15:558:0:0:0,-4.51545,-10 0/0:99:40:40:1409:0:0:0,-10,-10 0/0:64.7453:20:20:730:0:0:0,-6.0206,-10 0/0:34.6423:10:10:367:0:0:0,-3.0103,-10 0/0:99:60:60:2192:0:0:0,-10,-10 0/0:37.6526:11:11:413:0:0:0,-3.31133,-10 0/0:99:48:48:1686:0:0:0,-10,-10 0/0:49.6938:15:15:536:0:0:0,-4.51545,-10 0/0:25.6114:7:7:262:0:0:0,-2.10721,-10 0/0:99:47:47:1683:0:0:0,-10,-10 0/0:55.7144:17:17:625:0:0:0,-5.11751,-10 0/0:61.735:19:19:658:0:0:0,-5.71957,-10 0/0:34.6423:10:10:363:0:0:0,-3.0103,-10 0/0:49.6938:15:15:544:0:0:0,-4.51545,-10 0/0:58.7247:18:18:647:0:0:0,-5.41854,-10 0/0:88.8272:28:28:1021:0:0:0,-8.42884,-10 0/0:52.7041:16:16:607:0:0:0,-4.81648,-10 0/0:88.8272:28:28:1050:0:0:0,-8.42884,-10 0/0:37.6526:11:11:416:0:0:0,-3.31133,-10 0/0:55.7144:17:17:617:0:0:0,-5.11751,-10 0/0:97.8548:31:31:1158:0:0:0,-9.33193,-10 0/0:67.7556:21:21:778:0:0:0,-6.32163,-10 0/0:19.5908:5:5:189:0:0:0,-1.50515,-10 0/0:85.8172:27:27:1005:0:0:0,-8.12781,-10 0/0:31.632:9:9:340:0:0:0,-2.70927,-10 0/0:55.7144:17:17:598:0:0:0,-5.11751,-10 0/0:70.7659:22:22:722:0:0:0,-6.62266,-10 0/0:91.8371:29:29:1068:0:0:0,-8.72987,-10 0/0:61.735:19:19:708:0:0:0,-5.71957,-10 0/0:99:39:39:1438:0:0:0,-10,-10 0/0:55.7144:17:17:612:0:0:0,-5.11751,-10 0/0:52.7041:16:16:590:0:0:0,-4.81648,-10 0/0:31.632:9:9:340:0:0:0,-2.70927,-10 0/0:22.6011:6:6:208:0:0:0,-1.80618,-10 0/0:37.6526:11:11:403:0:0:0,-3.31133,-10 0/0:99:32:32:1164:0:0:0,-9.63296,-10 0/0:91.8371:29:29:1067:0:0:0,-8.72987,-10 0/0:85.8172:27:27:1015:0:0:0,-8.12781,-10 0/0:76.7865:24:24:891:0:0:0,-7.22472,-10 0/0:70.7659:22:22:812:0:0:0,-6.62266,-10 0/0:16.5805:4:4:152:0:0:0,-1.20412,-10 0/0:64.7453:20:20:759:0:0:0,-6.0206,-10 0/0:34.6423:10:10:349:0:0:0,-3.0103,-10 0/0:16.5805:4:4:152:0:0:0,-1.20412,-10 0/0:37.6526:11:11:416:0:0:0,-3.31133,-10 0/0:31.632:9:9:320:0:0:0,-2.70927,-10 0/0:43.6732:13:13:483:0:0:0,-3.91339,-10 scaffold_67 2482579 . C A 318.391 . AB=0.448276;ABP=3.68421;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1840;DPB=1840;DPRA=1.45721;EPP=4.51363;EPPR=3.64042;GTI=0;LEN=1;MEANALT=1;MQM=40;MQMR=59.2282;NS=92;NUMALT=1;ODDS=7.57941;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=481;QR=67115;RO=1823;RPP=31.2394;RPPR=3961.6;RUN=1;SAF=8;SAP=4.51363;SAR=5;SRF=900;SRP=3.64042;SRR=923;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:84.0959:18:18:682:0:0:0,-5.41854,-10 0/0:50.9826:7:7:234:0:0:0,-2.10721,-10 0/0:96.1364:22:22:820:0:0:0,-6.62266,-10 0/0:84.0959:18:18:661:0:0:0,-5.41854,-10 0/0:84.0959:18:18:666:0:0:0,-5.41854,-10 0/0:60.0135:10:10:361:0:0:0,-3.0103,-10 0/0:99:35:35:1291:0:0:0,-10,-10 0/0:96.1364:22:22:810:0:0:0,-6.62266,-10 0/0:66.0341:12:12:448:0:0:0,-3.61236,-10 0/0:32.9208:1:1:38:0:0:0,-0.30103,-3.8 0/0:63.0238:11:11:405:0:0:0,-3.31133,-10 0/0:63.0238:11:11:382:0:0:0,-3.31133,-10 0/0:99:25:25:931:0:0:0,-7.52575,-10 0/0:99:33:33:1146:0:0:0,-9.93399,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:99:31:31:1117:0:0:0,-9.33193,-10 0/0:99:29:29:1077:0:0:0,-8.72987,-10 0/0:63.0238:11:11:415:0:0:0,-3.31133,-10 0/0:99:30:30:1124:0:0:0,-9.0309,-10 0/0:99:34:34:1262:0:0:0,-10,-10 0/0:75.065:15:15:569:0:0:0,-4.51545,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:53.9929:8:8:301:0:0:0,-2.40824,-10 0/0:87.1056:19:19:613:0:0:0,-5.71957,-10 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:99:28:28:1002:0:0:0,-8.42884,-10 0/0:75.065:15:15:564:0:0:0,-4.51545,-10 0/0:96.1364:22:22:796:0:0:0,-6.62266,-10 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:38.9414:3:3:104:0:0:0,-0.90309,-9.70667 0/0:47.9723:6:6:228:0:0:0,-1.80618,-10 0/0:81.0855:17:17:628:0:0:0,-5.11751,-10 0/0:57.0032:9:9:326:0:0:0,-2.70927,-10 0/0:84.0959:18:18:664:0:0:0,-5.41854,-10 0/0:47.9723:6:6:221:0:0:0,-1.80618,-10 0/0:75.065:15:15:562:0:0:0,-4.51545,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:75.065:15:15:567:0:0:0,-4.51545,-10 0/0:84.0959:18:18:679:0:0:0,-5.41854,-10 0/0:99:36:36:1316:0:0:0,-10,-10 0/0:99:25:25:901:0:0:0,-7.52575,-10 0/0:87.1056:19:19:703:0:0:0,-5.71957,-10 0/0:99:29:29:1094:0:0:0,-8.72987,-10 0/0:99:35:35:1313:0:0:0,-10,-10 0/0:75.065:15:15:564:0:0:0,-4.51545,-10 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:90.1163:20:20:743:0:0:0,-6.0206,-10 0/0:60.0135:10:10:352:0:0:0,-3.0103,-10 0/0:99:60:60:2211:0:0:0,-10,-10 0/0:63.0238:11:11:415:0:0:0,-3.31133,-10 0/0:99:48:48:1764:0:0:0,-10,-10 0/0:75.065:15:15:562:0:0:0,-4.51545,-10 0/0:50.9826:7:7:265:0:0:0,-2.10721,-10 0/0:99:47:47:1739:0:0:0,-10,-10 0/0:81.0855:17:17:614:0:0:0,-5.11751,-10 0/0:87.1056:19:19:716:0:0:0,-5.71957,-10 0/0:60.0135:10:10:379:0:0:0,-3.0103,-10 0/0:75.065:15:15:534:0:0:0,-4.51545,-10 0/0:84.0959:18:18:658:0:0:0,-5.41854,-10 0/0:99:28:27:994:0:0:0,-8.12781,-10 0/0:78.0752:16:16:601:0:0:0,-4.81648,-10 0/0:99:28:28:1043:0:0:0,-8.42884,-10 0/0:63.0238:11:11:417:0:0:0,-3.31133,-10 0/0:81.0855:17:17:623:0:0:0,-5.11751,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:93.1265:21:21:764:0:0:0,-6.32163,-10 0/0:44.962:5:5:190:0:0:0,-1.50515,-10 0/0:99:27:27:1001:0:0:0,-8.12781,-10 0/0:53.9929:9:8:291:0:0:0,-2.40824,-10 0/0:81.0855:17:17:605:0:0:0,-5.11751,-10 0/0:96.1364:22:22:815:0:0:0,-6.62266,-10 0/1:99:29:16:600:13:481:-10,0,-10 0/0:87.1056:19:19:703:0:0:0,-5.71957,-10 0/0:99:39:38:1351:0:0:0,-10,-10 0/0:81.0855:17:17:634:0:0:0,-5.11751,-10 0/0:78.0752:16:16:560:0:0:0,-4.81648,-10 0/0:57.0032:9:9:326:0:0:0,-2.70927,-10 0/0:47.9723:6:6:227:0:0:0,-1.80618,-10 0/0:63.0238:11:11:415:0:0:0,-3.31133,-10 0/0:99:32:31:1142:0:0:0,-9.33193,-10 0/0:99:29:29:1089:0:0:0,-8.72987,-10 0/0:99:27:27:969:0:0:0,-8.12781,-10 0/0:99:24:24:889:0:0:0,-7.22472,-10 0/0:96.1364:22:22:826:0:0:0,-6.62266,-10 0/0:41.9517:4:4:141:0:0:0,-1.20412,-10 0/0:90.1163:20:20:751:0:0:0,-6.0206,-10 0/0:60.0135:10:10:375:0:0:0,-3.0103,-10 0/0:41.9517:4:4:152:0:0:0,-1.20412,-10 0/0:63.0238:11:11:418:0:0:0,-3.31133,-10 0/0:57.0032:9:9:339:0:0:0,-2.70927,-10 0/0:69.0444:13:13:458:0:0:0,-3.91339,-10 scaffold_67 3079039 . G A 148.088 . AB=0.411765;ABP=4.1599;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1X;DP=2019;DPB=2019;DPRA=0.772727;EPP=3.32051;EPPR=4.25793;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.998;NS=92;NUMALT=1;ODDS=14.8534;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=266;QR=73964;RO=2012;RPP=18.2106;RPPR=4372.01;RUN=1;SAF=4;SAP=3.32051;SAR=3;SRF=989;SRP=4.25793;SRR=1023;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:24:24:903:0:0:0,-7.22472,-10 0/0:99:18:18:660:0:0:0,-5.41854,-10 0/0:99:35:35:1244:0:0:0,-10,-10 0/0:99:18:18:679:0:0:0,-5.41854,-10 0/0:99:20:20:744:0:0:0,-6.0206,-10 0/0:99:17:17:638:0:0:0,-5.11751,-10 0/0:99:38:38:1410:0:0:0,-10,-10 0/0:99:23:23:855:0:0:0,-6.92369,-10 0/0:85.5794:11:11:412:0:0:0,-3.31133,-10 0/0:82.5691:10:10:369:0:0:0,-3.0103,-10 0/0:88.5896:12:12:433:0:0:0,-3.61236,-10 0/0:70.5279:6:6:226:0:0:0,-1.80618,-10 0/0:99:44:44:1613:0:0:0,-10,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:99:29:29:1024:0:0:0,-8.72987,-10 0/0:99:39:39:1371:0:0:0,-10,-10 0/0:91.5999:13:13:494:0:0:0,-3.91339,-10 0/0:97.62:15:15:564:0:0:0,-4.51545,-10 0/0:99:31:31:1153:0:0:0,-9.33193,-10 0/0:88.5896:12:12:406:0:0:0,-3.61236,-10 0/0:99:39:39:1447:0:0:0,-10,-10 0/0:79.5587:9:9:328:0:0:0,-2.70927,-10 0/0:99:29:29:1034:0:0:0,-8.72987,-10 0/0:99:21:21:744:0:0:0,-6.32163,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:99:19:19:715:0:0:0,-5.71957,-10 0/0:82.5691:10:10:346:0:0:0,-3.0103,-10 0/0:99:18:18:634:0:0:0,-5.41854,-10 0/0:99:42:42:1563:0:0:0,-10,-10 0/0:70.5279:6:6:213:0:0:0,-1.80618,-10 0/0:79.5587:9:9:311:0:0:0,-2.70927,-10 0/0:99:20:20:695:0:0:0,-6.0206,-10 0/0:99:17:17:595:0:0:0,-5.11751,-10 0/0:94.6071:14:14:509:0:0:0,-4.21442,-10 0/0:91.5999:13:13:487:0:0:0,-3.91339,-10 0/0:97.62:15:15:551:0:0:0,-4.51545,-10 0/0:99:26:26:968:0:0:0,-7.82678,-10 0/0:79.5587:9:9:342:0:0:0,-2.70927,-10 0/0:99:21:21:777:0:0:0,-6.32163,-10 0/0:99:27:27:1011:0:0:0,-8.12781,-10 0/0:99:26:26:984:0:0:0,-7.82678,-10 0/0:99:20:20:760:0:0:0,-6.0206,-10 0/0:99:39:39:1445:0:0:0,-10,-10 0/0:99:18:18:665:0:0:0,-5.41854,-10 0/0:99:20:20:758:0:0:0,-6.0206,-10 0/0:99:51:51:1868:0:0:0,-10,-10 0/0:99:32:32:1197:0:0:0,-9.63296,-10 0/0:97.62:15:15:565:0:0:0,-4.51545,-10 0/0:99:29:29:1069:0:0:0,-8.72987,-10 0/0:94.6071:14:14:517:0:0:0,-4.21442,-10 0/0:99:38:38:1380:0:0:0,-10,-10 0/0:99:19:19:710:0:0:0,-5.71957,-10 0/0:91.5999:13:13:486:0:0:0,-3.91339,-10 0/0:99:46:46:1712:0:0:0,-10,-10 0/0:99:16:16:575:0:0:0,-4.81648,-10 0/0:99:20:20:732:0:0:0,-6.0206,-10 0/0:82.5691:10:10:345:0:0:0,-3.0103,-10 0/0:99:20:20:759:0:0:0,-6.0206,-10 0/0:73.5382:7:7:261:0:0:0,-2.10721,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:99:26:26:950:0:0:0,-7.82678,-10 0/0:99:44:44:1605:0:0:0,-10,-10 0/1:99:17:10:349:7:266:-10,0,-10 0/0:70.5279:6:6:227:0:0:0,-1.80618,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:99:21:21:793:0:0:0,-6.32163,-10 0/0:85.5794:11:11:411:0:0:0,-3.31133,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:99:16:16:600:0:0:0,-4.81648,-10 0/0:99:23:23:870:0:0:0,-6.92369,-10 0/0:99:27:27:1000:0:0:0,-8.12781,-10 0/0:99:36:36:1347:0:0:0,-10,-10 0/0:97.62:15:15:558:0:0:0,-4.51545,-10 0/0:99:40:40:1453:0:0:0,-10,-10 0/0:79.5587:9:9:330:0:0:0,-2.70927,-10 0/0:99:23:23:872:0:0:0,-6.92369,-10 0/0:88.5896:12:12:441:0:0:0,-3.61236,-10 0/0:67.5176:5:5:185:0:0:0,-1.50515,-10 0/0:82.5691:10:10:357:0:0:0,-3.0103,-10 0/0:99:46:46:1721:0:0:0,-10,-10 0/0:99:27:27:1000:0:0:0,-8.12781,-10 0/0:99:23:23:855:0:0:0,-6.92369,-10 0/0:99:21:21:771:0:0:0,-6.32163,-10 0/0:99:23:23:850:0:0:0,-6.92369,-10 0/0:97.62:15:15:551:0:0:0,-4.51545,-10 0/0:99:23:23:823:0:0:0,-6.92369,-10 0/0:99:22:22:804:0:0:0,-6.62266,-10 0/0:64.5073:4:4:126:0:0:0,-1.20412,-10 0/0:99:24:24:873:0:0:0,-7.22472,-10 0/0:99:22:22:795:0:0:0,-6.62266,-10 0/0:97.62:15:15:552:0:0:0,-4.51545,-10 scaffold_67 3138237 . T C 359.211 . AB=0.625;ABP=6.26751;AC=1;AF=0.00561798;AN=178;AO=15;CIGAR=1X;DP=1384;DPB=1384;DPRA=1.55294;EPP=3.15506;EPPR=4.08334;GTI=0;LEN=1;MEANALT=1;MQM=56.8;MQMR=59.739;NS=89;NUMALT=1;ODDS=3.92163;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=544;QR=50425;RO=1368;RPP=35.5824;RPPR=2973.58;RUN=1;SAF=7;SAP=3.15506;SAR=8;SRF=671;SRP=4.08334;SRR=697;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.412:14:14:524:0:0:0,-4.21442,-10 0/0:41.3605:9:9:320:0:0:0,-2.70927,-10 0/0:65.4429:17:17:624:0:0:0,-5.11751,-10 0/0:53.4017:13:13:483:0:0:0,-3.91339,-10 0/0:41.3605:9:9:328:0:0:0,-2.70927,-10 0/0:32.3296:6:6:225:0:0:0,-1.80618,-10 0/0:98.5541:28:28:1046:0:0:0,-8.42884,-10 0/1:99:24:9:320:15:544:-10,0,-10 0/0:47.3811:11:11:418:0:0:0,-3.31133,-10 0/0:23.2987:3:3:114:0:0:0,-0.90309,-10 0/0:23.2987:3:3:113:0:0:0,-0.90309,-10 0/0:29.3193:5:5:177:0:0:0,-1.50515,-10 0/0:71.4635:19:19:703:0:0:0,-5.71957,-10 0/0:99:31:31:1119:0:0:0,-9.33193,-10 0/0:50.3914:12:12:432:0:0:0,-3.61236,-10 0/0:65.4429:17:17:645:0:0:0,-5.11751,-10 0/0:74.4738:20:20:752:0:0:0,-6.0206,-10 0/0:35.3399:7:7:255:0:0:0,-2.10721,-10 0/0:62.4326:16:16:594:0:0:0,-4.81648,-10 0/0:83.5047:23:23:829:0:0:0,-6.92369,-10 0/0:62.4326:16:16:603:0:0:0,-4.81648,-10 0/0:95.5466:27:27:1013:0:0:0,-8.12781,-10 0/0:32.3296:6:6:226:0:0:0,-1.80618,-10 0/0:65.4429:17:17:598:0:0:0,-5.11751,-10 0/0:68.4532:18:18:683:0:0:0,-5.41854,-10 0/0:77.4841:21:21:785:0:0:0,-6.32163,-10 0/0:56.412:14:14:532:0:0:0,-4.21442,-10 0/0:35.3399:7:7:263:0:0:0,-2.10721,-10 0/0:95.5466:27:27:1017:0:0:0,-8.12781,-10 0/0:99:29:29:1097:0:0:0,-8.72987,-10 0/0:23.2987:3:3:113:0:0:0,-0.90309,-10 0/0:26.309:4:4:150:0:0:0,-1.20412,-10 0/0:59.4223:15:15:548:0:0:0,-4.51545,-10 0/0:38.3502:8:8:287:0:0:0,-2.40824,-10 0/0:56.412:14:14:516:0:0:0,-4.21442,-10 0/0:26.309:4:4:130:0:0:0,-1.20412,-10 0/0:35.3399:8:7:264:0:0:0,-2.10721,-10 0/0:99:30:30:1132:0:0:0,-9.0309,-10 .:.:.:.:.:.:.:. 0/0:53.4017:13:13:494:0:0:0,-3.91339,-10 0/0:80.4944:22:22:833:0:0:0,-6.62266,-10 0/0:80.4944:22:22:803:0:0:0,-6.62266,-10 .:.:.:.:.:.:.:. 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:89.5255:25:25:934:0:0:0,-7.52575,-10 0/0:38.3502:8:8:304:0:0:0,-2.40824,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:80.4944:22:22:834:0:0:0,-6.62266,-10 0/0:38.3502:8:8:300:0:0:0,-2.40824,-10 0/0:68.4532:18:18:640:0:0:0,-5.41854,-10 0/0:53.4017:13:13:487:0:0:0,-3.91339,-10 0/0:98.5541:28:28:1036:0:0:0,-8.42884,-10 0/0:65.4429:17:17:614:0:0:0,-5.11751,-10 0/0:44.3708:10:10:377:0:0:0,-3.0103,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:35.3399:7:7:264:0:0:0,-2.10721,-10 0/0:92.536:26:26:912:0:0:0,-7.82678,-10 0/0:23.2987:3:3:113:0:0:0,-0.90309,-10 0/0:41.3605:9:9:330:0:0:0,-2.70927,-10 0/0:29.3193:5:5:190:0:0:0,-1.50515,-10 0/0:38.3502:8:8:304:0:0:0,-2.40824,-10 0/0:71.4635:19:19:694:0:0:0,-5.71957,-10 0/0:99:35:35:1257:0:0:0,-10,-10 0/0:65.4429:17:17:616:0:0:0,-5.11751,-10 0/0:38.3502:8:8:302:0:0:0,-2.40824,-10 0/0:50.3914:12:12:438:0:0:0,-3.61236,-10 0/0:44.3708:10:10:380:0:0:0,-3.0103,-10 .:.:.:.:.:.:.:. 0/0:99:43:43:1582:0:0:0,-10,-10 0/0:47.3811:11:11:403:0:0:0,-3.31133,-10 0/0:65.4429:17:17:611:0:0:0,-5.11751,-10 0/0:77.4841:21:21:761:0:0:0,-6.32163,-10 0/0:95.5466:27:27:1019:0:0:0,-8.12781,-10 0/0:47.3811:11:11:396:0:0:0,-3.31133,-10 0/0:98.5541:28:28:1026:0:0:0,-8.42884,-10 0/0:41.3605:9:9:335:0:0:0,-2.70927,-10 0/0:47.3811:11:11:409:0:0:0,-3.31133,-10 0/0:50.3914:12:12:440:0:0:0,-3.61236,-10 0/0:26.309:4:4:152:0:0:0,-1.20412,-10 0/0:47.3811:11:11:365:0:0:0,-3.31133,-10 0/0:86.5151:24:24:850:0:0:0,-7.22472,-10 0/0:68.4532:18:18:640:0:0:0,-5.41854,-10 0/0:62.4326:16:16:583:0:0:0,-4.81648,-10 0/0:68.4532:18:18:675:0:0:0,-5.41854,-10 0/0:47.3811:11:11:399:0:0:0,-3.31133,-10 0/0:23.2987:3:3:114:0:0:0,-0.90309,-10 0/0:50.3914:12:12:454:0:0:0,-3.61236,-10 0/0:56.412:14:14:510:0:0:0,-4.21442,-10 0/0:17.2781:1:1:38:0:0:0,-0.30103,-3.8 0/0:59.4223:15:15:544:0:0:0,-4.51545,-10 0/0:38.3502:8:8:293:0:0:0,-2.40824,-10 0/0:83.5047:23:23:813:0:0:0,-6.92369,-10 scaffold_67 3251939 . G A 154.913 . AB=0.444444;ABP=3.49285;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1067;DPB=1067;DPRA=1.56149;EPP=20.3821;EPPR=2289.58;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9555;NS=92;NUMALT=1;ODDS=7.54103;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=277;QR=37434;RO=1057;RPP=4.09604;RPPR=6.4637;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=509;SRP=6.135;SRR=548;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.8801:13:13:424:0:0:0,-3.91339,-10 0/0:41.7977:5:5:190:0:0:0,-1.50515,-10 0/0:53.8389:9:9:329:0:0:0,-2.70927,-10 0/0:59.8595:11:11:369:0:0:0,-3.31133,-10 0/0:56.8492:10:10:354:0:0:0,-3.0103,-10 0/0:50.8286:8:8:303:0:0:0,-2.40824,-10 0/0:99:32:32:1108:0:0:0,-9.63296,-10 0/1:99:18:10:367:8:277:-10,0,-10 0/0:56.8492:10:10:349:0:0:0,-3.0103,-10 0/0:38.7874:4:4:143:0:0:0,-1.20412,-10 0/0:32.7668:2:2:52:0:0:0,-0.60206,-4.94 0/0:32.7668:2:2:52:0:0:0,-0.60206,-4.94 0/0:62.8698:12:12:439:0:0:0,-3.61236,-10 0/0:56.8492:10:10:365:0:0:0,-3.0103,-10 0/0:53.8389:9:9:323:0:0:0,-2.70927,-10 0/0:74.911:16:16:563:0:0:0,-4.81648,-10 0/0:65.8801:13:13:469:0:0:0,-3.91339,-10 0/0:44.808:6:6:226:0:0:0,-1.80618,-10 0/0:71.9007:15:15:562:0:0:0,-4.51545,-10 0/0:99:29:29:988:0:0:0,-8.72987,-10 0/0:50.8286:8:8:283:0:0:0,-2.40824,-10 0/0:99:25:25:932:0:0:0,-7.52575,-10 0/0:47.8183:7:7:261:0:0:0,-2.10721,-10 0/0:56.8492:10:10:373:0:0:0,-3.0103,-10 0/0:56.8492:10:10:361:0:0:0,-3.0103,-10 0/0:65.8801:13:13:437:0:0:0,-3.91339,-10 0/0:71.9007:15:15:543:0:0:0,-4.51545,-10 0/0:50.8286:9:8:304:0:0:0,-2.40824,-10 0/0:53.8389:9:9:313:0:0:0,-2.70927,-10 0/0:65.8801:13:13:434:0:0:0,-3.91339,-10 0/0:38.7874:4:4:151:0:0:0,-1.20412,-10 0/0:32.7668:2:2:65:0:0:0,-0.60206,-6.175 0/0:59.8595:11:11:374:0:0:0,-3.31133,-10 0/0:50.8286:8:8:299:0:0:0,-2.40824,-10 0/0:68.8904:14:14:460:0:0:0,-4.21442,-10 0/0:47.8183:7:7:227:0:0:0,-2.10721,-10 0/0:35.7771:3:3:112:0:0:0,-0.90309,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:50.8286:8:8:302:0:0:0,-2.40824,-10 0/0:62.8698:12:12:413:0:0:0,-3.61236,-10 0/0:74.911:16:16:570:0:0:0,-4.81648,-10 0/0:62.8698:12:12:437:0:0:0,-3.61236,-10 0/0:71.9007:15:15:533:0:0:0,-4.51545,-10 0/0:77.9213:17:17:588:0:0:0,-5.11751,-10 0/0:53.8389:9:9:301:0:0:0,-2.70927,-10 0/0:68.8904:14:14:517:0:0:0,-4.21442,-10 0/0:92.972:22:22:743:0:0:0,-6.62266,-10 0/0:56.8492:10:10:362:0:0:0,-3.0103,-10 0/0:47.8183:7:7:231:0:0:0,-2.10721,-10 0/0:86.9522:20:20:745:0:0:0,-6.0206,-10 0/0:50.8286:8:8:303:0:0:0,-2.40824,-10 0/0:86.9522:20:20:741:0:0:0,-6.0206,-10 0/0:35.7771:3:3:113:0:0:0,-0.90309,-10 0/0:38.7874:4:4:151:0:0:0,-1.20412,-10 0/0:80.9316:18:18:595:0:0:0,-5.41854,-10 0/0:41.7977:5:5:174:0:0:0,-1.50515,-10 0/0:68.8904:14:14:486:0:0:0,-4.21442,-10 0/0:38.7874:4:4:138:0:0:0,-1.20412,-10 0/0:53.8389:9:9:334:0:0:0,-2.70927,-10 0/0:56.8492:10:10:341:0:0:0,-3.0103,-10 0/0:77.9213:17:17:605:0:0:0,-5.11751,-10 0/0:59.8595:11:11:377:0:0:0,-3.31133,-10 0/0:92.972:22:22:797:0:0:0,-6.62266,-10 0/0:62.8698:12:12:430:0:0:0,-3.61236,-10 0/0:56.8492:10:10:340:0:0:0,-3.0103,-10 0/0:74.911:17:16:578:0:0:0,-4.81648,-10 0/0:68.8904:14:14:473:0:0:0,-4.21442,-10 0/0:35.7771:3:3:107:0:0:0,-0.90309,-9.98667 0/0:77.9213:17:17:637:0:0:0,-5.11751,-10 0/0:41.7977:5:5:186:0:0:0,-1.50515,-10 0/0:68.8904:14:14:500:0:0:0,-4.21442,-10 0/0:95.9814:23:23:791:0:0:0,-6.92369,-10 0/0:71.9007:15:15:556:0:0:0,-4.51545,-10 0/0:41.7977:5:5:171:0:0:0,-1.50515,-10 0/0:99:25:25:903:0:0:0,-7.52575,-10 0/0:56.8492:10:10:344:0:0:0,-3.0103,-10 0/0:53.8389:9:9:342:0:0:0,-2.70927,-10 0/0:41.7977:5:5:184:0:0:0,-1.50515,-10 0/0:41.7977:5:5:189:0:0:0,-1.50515,-10 0/0:38.7874:4:4:123:0:0:0,-1.20412,-10 0/0:83.9418:19:19:677:0:0:0,-5.71957,-10 0/0:89.9621:21:21:753:0:0:0,-6.32163,-10 0/0:65.8801:13:13:446:0:0:0,-3.91339,-10 0/0:65.8801:13:13:441:0:0:0,-3.91339,-10 0/0:53.8389:9:9:304:0:0:0,-2.70927,-10 0/0:38.7874:4:4:143:0:0:0,-1.20412,-10 0/0:56.8492:10:10:299:0:0:0,-3.0103,-10 0/0:44.808:6:6:225:0:0:0,-1.80618,-10 0/0:53.8389:9:9:309:0:0:0,-2.70927,-10 0/0:50.8286:8:8:281:0:0:0,-2.40824,-10 0/0:77.9213:17:17:587:0:0:0,-5.11751,-10 0/0:59.8595:11:11:397:0:0:0,-3.31133,-10 scaffold_67 3257874 . G A 1133.87 . AB=0.478261;ABP=3.38795;AC=5;AF=0.0271739;AN=184;AO=45;CIGAR=1X;DP=1403;DPB=1403;DPRA=1.17142;EPP=3.05855;EPPR=17.4521;GTI=1;LEN=1;MEANALT=1;MQM=59.9111;MQMR=59.7966;NS=92;NUMALT=1;ODDS=2.32841;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1683;QR=49001;RO=1357;RPP=100.727;RPPR=2949.7;RUN=1;SAF=23;SAP=3.05855;SAR=22;SRF=631;SRP=17.4521;SRR=726;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:35.5678:6:6:213:0:0:0,-1.80618,-10 0/0:44.5987:9:9:311:0:0:0,-2.70927,-10 0/0:80.7222:21:21:778:0:0:0,-6.32163,-10 0/0:62.6605:15:15:542:0:0:0,-4.51545,-10 0/0:74.7017:19:19:687:0:0:0,-5.71957,-10 0/0:32.5575:5:5:172:0:0:0,-1.50515,-10 0/0:80.7222:21:21:754:0:0:0,-6.32163,-10 0/0:77.712:20:20:715:0:0:0,-6.0206,-10 0/0:41.5884:8:8:297:0:0:0,-2.40824,-10 0/0:35.5678:6:6:223:0:0:0,-1.80618,-10 0/0:41.5884:8:8:288:0:0:0,-2.40824,-10 0/0:26.5369:3:3:113:0:0:0,-0.90309,-10 0/0:86.7425:23:23:866:0:0:0,-6.92369,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:89.7524:24:24:898:0:0:0,-7.22472,-10 0/0:98.7852:27:27:972:0:0:0,-8.12781,-10 0/0:95.7744:26:26:955:0:0:0,-7.82678,-10 0/0:44.5987:9:9:330:0:0:0,-2.70927,-10 0/1:99:15:9:319:6:228:-10,0,-10 0/0:99:28:28:1010:0:0:0,-8.42884,-10 0/1:95.0466:16:12:433:4:148:-10,0,-10 0/0:74.7017:19:19:656:0:0:0,-5.71957,-10 0/0:35.5678:6:6:202:0:0:0,-1.80618,-10 0/0:68.6811:17:17:571:0:0:0,-5.11751,-10 0/0:44.5987:9:9:340:0:0:0,-2.70927,-10 0/0:68.6811:17:17:600:0:0:0,-5.11751,-10 0/0:71.6914:18:18:622:0:0:0,-5.41854,-10 0/1:0.389047:15:0:0:15:569:-10,-4.51545,0 0/0:50.6193:11:11:395:0:0:0,-3.31133,-10 0/1:99:30:19:691:11:418:-10,0,-10 0/0:35.5678:6:6:225:0:0:0,-1.80618,-10 0/0:32.5575:5:5:190:0:0:0,-1.50515,-10 0/0:59.6502:14:14:511:0:0:0,-4.21442,-10 0/0:29.5472:4:4:148:0:0:0,-1.20412,-10 0/0:34.9354:14:13:456:1:16:0,-1.46829,-10 0/0:20.5163:1:1:38:0:0:0,-0.30103,-3.8 0/0:47.609:10:10:347:0:0:0,-3.0103,-10 0/0:86.7425:23:23:820:0:0:0,-6.92369,-10 0/0:44.5987:9:9:333:0:0:0,-2.70927,-10 0/0:53.6296:12:12:445:0:0:0,-3.61236,-10 0/0:80.7222:21:21:791:0:0:0,-6.32163,-10 0/0:20.5163:1:1:38:0:0:0,-0.30103,-3.8 0/0:71.6914:18:18:666:0:0:0,-5.41854,-10 0/0:89.7524:24:24:869:0:0:0,-7.22472,-10 0/0:68.6811:17:17:600:0:0:0,-5.11751,-10 0/0:53.6296:12:12:420:0:0:0,-3.61236,-10 0/0:99:41:41:1479:0:0:0,-10,-10 0/0:59.6502:14:14:510:0:0:0,-4.21442,-10 0/0:59.6502:14:14:503:0:0:0,-4.21442,-10 0/0:86.7425:23:23:815:0:0:0,-6.92369,-10 0/0:56.6399:13:13:480:0:0:0,-3.91339,-10 0/0:99:32:32:1135:0:0:0,-9.63296,-10 0/0:62.6605:15:15:519:0:0:0,-4.51545,-10 0/0:26.5369:3:3:90:0:0:0,-0.90309,-8.4 0/0:99:35:35:1259:0:0:0,-10,-10 0/0:50.6193:11:11:403:0:0:0,-3.31133,-10 0/0:47.609:10:10:374:0:0:0,-3.0103,-10 0/0:44.5987:9:9:318:0:0:0,-2.70927,-10 0/0:65.6708:16:16:544:0:0:0,-4.81648,-10 0/0:47.609:10:10:380:0:0:0,-3.0103,-10 0/0:71.6914:18:18:655:0:0:0,-5.41854,-10 0/0:92.7619:26:25:895:0:0:0,-7.52575,-10 0/0:95.7744:26:26:945:0:0:0,-7.82678,-10 0/0:50.6193:11:11:353:0:0:0,-3.31133,-10 0/0:38.5781:7:7:255:0:0:0,-2.10721,-10 0/0:83.7327:22:22:813:0:0:0,-6.62266,-10 0/0:62.6605:15:15:546:0:0:0,-4.51545,-10 0/0:23.5266:2:2:76:0:0:0,-0.60206,-7.22 0/0:80.7222:21:21:765:0:0:0,-6.32163,-10 0/0:56.6399:13:13:468:0:0:0,-3.91339,-10 0/0:41.5884:8:8:298:0:0:0,-2.40824,-10 0/0:89.7524:24:24:869:0:0:0,-7.22472,-10 0/1:99:16:8:289:8:304:-10,0,-10 0/0:38.5781:7:7:262:0:0:0,-2.10721,-10 0/0:65.6708:16:16:600:0:0:0,-4.81648,-10 0/0:68.6811:17:17:636:0:0:0,-5.11751,-10 0/0:68.6811:17:17:640:0:0:0,-5.11751,-10 0/0:56.6399:13:13:451:0:0:0,-3.91339,-10 0/0:29.5472:4:4:125:0:0:0,-1.20412,-10 0/0:50.6193:11:11:389:0:0:0,-3.31133,-10 0/0:99:34:34:1222:0:0:0,-10,-10 0/0:77.712:20:20:708:0:0:0,-6.0206,-10 0/0:74.7017:19:19:688:0:0:0,-5.71957,-10 0/0:95.7744:26:26:937:0:0:0,-7.82678,-10 0/0:71.6914:18:18:660:0:0:0,-5.41854,-10 0/0:26.5369:3:3:114:0:0:0,-0.90309,-10 0/0:53.6296:12:12:420:0:0:0,-3.61236,-10 0/0:41.5884:8:8:301:0:0:0,-2.40824,-10 0/0:32.5575:5:5:176:0:0:0,-1.50515,-10 0/0:47.609:10:10:345:0:0:0,-3.0103,-10 0/0:71.6914:18:18:658:0:0:0,-5.41854,-10 0/0:65.6708:16:16:594:0:0:0,-4.81648,-10 scaffold_67 3607580 . G C 352.395 . AB=0.535714;ABP=3.32051;AC=2;AF=0.0108696;AN=184;AO=16;CIGAR=1X;DP=1155;DPB=1155;DPRA=1.09186;EPP=5.18177;EPPR=4.62213;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9868;NS=92;NUMALT=1;ODDS=6.07421;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=569;QR=40825;RO=1133;RPP=37.7539;RPPR=2411.45;RUN=1;SAF=6;SAP=5.18177;SAR=10;SRF=546;SRP=6.23205;SRR=587;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.499:9:9:338:0:0:0,-2.70927,-10 0/0:38.4579:5:5:190:0:0:0,-1.50515,-10 0/0:83.6123:20:20:755:0:0:0,-6.0206,-10 0/0:44.4784:7:7:239:0:0:0,-2.10721,-10 0/0:50.499:9:9:342:0:0:0,-2.70927,-10 0/0:35.4476:4:4:106:0:0:0,-1.20412,-9.805 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:59.5299:12:12:456:0:0:0,-3.61236,-10 0/0:56.5196:11:11:407:0:0:0,-3.31133,-10 0/0:32.4373:3:3:112:0:0:0,-0.90309,-10 0/0:38.4579:5:5:188:0:0:0,-1.50515,-10 0/0:50.499:9:9:318:0:0:0,-2.70927,-10 0/0:83.6123:20:20:748:0:0:0,-6.0206,-10 0/0:89.6327:22:22:832:0:0:0,-6.62266,-10 0/0:59.5299:12:12:433:0:0:0,-3.61236,-10 0/0:71.5711:16:16:559:0:0:0,-4.81648,-10 0/0:77.5917:18:18:627:0:0:0,-5.41854,-10 0/0:38.4579:5:5:181:0:0:0,-1.50515,-10 0/0:80.602:19:19:686:0:0:0,-5.71957,-10 0/0:92.6428:25:23:807:0:0:0,-6.92369,-10 0/0:62.5402:13:13:487:0:0:0,-3.91339,-10 0/0:86.6225:21:21:780:0:0:0,-6.32163,-10 0/0:41.4682:6:6:228:0:0:0,-1.80618,-10 0/0:50.499:9:9:305:0:0:0,-2.70927,-10 0/0:56.5196:11:11:409:0:0:0,-3.31133,-10 0/0:80.602:19:19:699:0:0:0,-5.71957,-10 0/0:62.5402:13:13:458:0:0:0,-3.91339,-10 0/0:56.5196:11:11:387:0:0:0,-3.31133,-10 0/0:53.5093:10:10:357:0:0:0,-3.0103,-10 0/0:62.5402:13:13:484:0:0:0,-3.91339,-10 0/0:26.4167:1:1:38:0:0:0,-0.30103,-3.8 0/0:53.5093:10:10:355:0:0:0,-3.0103,-10 0/0:44.4784:7:7:255:0:0:0,-2.10721,-10 0/0:41.4682:6:6:228:0:0:0,-1.80618,-10 0/0:50.499:9:9:339:0:0:0,-2.70927,-10 0/0:32.4373:3:3:112:0:0:0,-0.90309,-10 0/0:68.5608:15:15:518:0:0:0,-4.51545,-10 0/0:74.5814:17:17:602:0:0:0,-5.11751,-10 0/0:62.5402:13:13:447:0:0:0,-3.91339,-10 0/0:68.5608:15:15:542:0:0:0,-4.51545,-10 0/0:98.6621:25:25:930:0:0:0,-7.52575,-10 0/0:80.602:19:19:714:0:0:0,-5.71957,-10 0/0:56.5196:11:11:406:0:0:0,-3.31133,-10 0/0:89.6327:22:22:761:0:0:0,-6.62266,-10 0/0:65.5505:14:14:474:0:0:0,-4.21442,-10 0/0:56.5196:11:11:386:0:0:0,-3.31133,-10 0/0:74.5814:17:17:586:0:0:0,-5.11751,-10 0/0:65.5505:14:14:446:0:0:0,-4.21442,-10 0/0:62.5402:13:13:470:0:0:0,-3.91339,-10 0/0:99:33:33:1175:0:0:0,-9.93399,-10 0/0:41.4682:6:6:215:0:0:0,-1.80618,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:41.6643:13:12:446:1:14:0,-1.39945,-10 0/0:35.4476:4:4:152:0:0:0,-1.20412,-10 0/0:80.602:19:19:683:0:0:0,-5.71957,-10 0/0:53.5093:10:10:342:0:0:0,-3.0103,-10 0/0:56.5196:12:11:416:0:0:0,-3.31133,-10 0/0:35.4476:4:4:148:0:0:0,-1.20412,-10 0/0:53.5093:10:10:371:0:0:0,-3.0103,-10 0/0:44.4784:7:7:253:0:0:0,-2.10721,-10 0/1:99:15:7:262:8:300:-10,0,-10 0/0:41.4682:6:6:197:0:0:0,-1.80618,-10 0/0:83.6123:20:20:717:0:0:0,-6.0206,-10 0/1:99:13:6:226:7:255:-10,0,-10 0/0:53.5093:10:10:364:0:0:0,-3.0103,-10 0/0:83.6123:20:20:713:0:0:0,-6.0206,-10 0/0:47.4887:8:8:258:0:0:0,-2.40824,-10 0/0:44.4784:7:7:248:0:0:0,-2.10721,-10 0/0:89.6327:22:22:808:0:0:0,-6.62266,-10 0/0:56.5196:11:11:389:0:0:0,-3.31133,-10 0/0:62.5402:13:13:461:0:0:0,-3.91339,-10 0/0:95.6527:24:24:888:0:0:0,-7.22472,-10 0/0:62.5402:13:13:462:0:0:0,-3.91339,-10 0/0:44.4784:7:7:266:0:0:0,-2.10721,-10 0/0:74.5814:18:17:613:0:0:0,-5.11751,-10 0/0:41.4682:6:6:225:0:0:0,-1.80618,-10 0/0:47.4887:8:8:299:0:0:0,-2.40824,-10 0/0:62.5402:13:13:485:0:0:0,-3.91339,-10 0/0:38.4579:5:5:161:0:0:0,-1.50515,-10 0/0:41.4682:6:6:226:0:0:0,-1.80618,-10 0/0:80.602:20:19:673:0:0:0,-5.71957,-10 0/0:74.5814:17:17:599:0:0:0,-5.11751,-10 0/0:56.5196:12:11:407:0:0:0,-3.31133,-10 0/0:68.5608:15:15:502:0:0:0,-4.51545,-10 0/0:83.6123:20:20:711:0:0:0,-6.0206,-10 0/0:26.4167:1:1:14:0:0:0,-0.30103,-1.4 0/0:53.5093:10:10:356:0:0:0,-3.0103,-10 0/0:44.4784:7:7:228:0:0:0,-2.10721,-10 0/0:38.4579:5:5:186:0:0:0,-1.50515,-10 0/0:53.5093:10:10:348:0:0:0,-3.0103,-10 0/0:50.499:9:9:336:0:0:0,-2.70927,-10 0/0:35.4476:4:4:149:0:0:0,-1.20412,-10 scaffold_67 3831898 . T C 172.607 . AB=0.75;ABP=9.52472;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1293;DPB=1293;DPRA=0.852459;EPP=5.18177;EPPR=3.14739;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9797;NS=92;NUMALT=1;ODDS=7.39309;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=308;QR=46911;RO=1283;RPP=22.5536;RPPR=2685.75;RUN=1;SAF=3;SAP=5.18177;SAR=6;SRF=625;SRP=4.85343;SRR=658;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.2266:12:12:447:0:0:0,-3.61236,-10 0/0:56.1957:9:9:315:0:0:0,-2.70927,-10 0/0:80.2781:17:17:629:0:0:0,-5.11751,-10 0/0:56.1957:9:9:328:0:0:0,-2.70927,-10 0/0:50.1751:7:7:266:0:0:0,-2.10721,-10 0/0:41.1442:4:4:152:0:0:0,-1.20412,-10 0/0:95.3291:22:22:791:0:0:0,-6.62266,-10 0/0:83.2883:18:18:614:0:0:0,-5.41854,-10 0/0:59.206:10:10:359:0:0:0,-3.0103,-10 0/0:32.1133:1:1:33:0:0:0,-0.30103,-3.3 0/0:50.1751:7:7:261:0:0:0,-2.10721,-10 0/0:50.1751:7:7:264:0:0:0,-2.10721,-10 0/0:99:24:24:869:0:0:0,-7.22472,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:89.3085:20:20:755:0:0:0,-6.0206,-10 0/0:99:24:24:898:0:0:0,-7.22472,-10 0/0:77.2678:16:16:604:0:0:0,-4.81648,-10 0/0:47.1648:6:6:218:0:0:0,-1.80618,-10 0/0:71.2472:14:14:520:0:0:0,-4.21442,-10 0/0:80.2781:17:17:625:0:0:0,-5.11751,-10 0/0:74.2575:15:15:567:0:0:0,-4.51545,-10 0/0:86.2985:19:19:719:0:0:0,-5.71957,-10 0/0:62.2163:11:11:418:0:0:0,-3.31133,-10 0/0:74.2575:15:15:537:0:0:0,-4.51545,-10 0/0:86.2985:19:19:708:0:0:0,-5.71957,-10 0/0:80.2781:17:17:640:0:0:0,-5.11751,-10 0/0:77.2678:16:16:584:0:0:0,-4.81648,-10 0/0:50.1751:7:7:261:0:0:0,-2.10721,-10 0/0:59.206:10:10:366:0:0:0,-3.0103,-10 0/0:74.2575:15:15:539:0:0:0,-4.51545,-10 0/0:59.206:10:10:348:0:0:0,-3.0103,-10 0/0:50.1751:7:7:244:0:0:0,-2.10721,-10 0/0:71.2472:14:14:517:0:0:0,-4.21442,-10 0/0:53.1854:8:8:299:0:0:0,-2.40824,-10 0/0:53.1854:8:8:304:0:0:0,-2.40824,-10 0/0:53.1854:8:8:278:0:0:0,-2.40824,-10 0/0:56.1957:9:9:337:0:0:0,-2.70927,-10 0/0:95.3291:22:22:816:0:0:0,-6.62266,-10 0/0:59.206:10:10:380:0:0:0,-3.0103,-10 0/0:68.2369:13:13:479:0:0:0,-3.91339,-10 0/0:92.3191:21:21:773:0:0:0,-6.32163,-10 0/0:71.2472:14:14:527:0:0:0,-4.21442,-10 0/0:59.206:10:10:349:0:0:0,-3.0103,-10 0/0:98.3355:23:23:818:0:0:0,-6.92369,-10 0/0:77.2678:16:16:591:0:0:0,-4.81648,-10 0/0:71.2472:14:14:513:0:0:0,-4.21442,-10 0/0:99:29:29:1062:0:0:0,-8.72987,-10 0/0:89.3085:20:20:741:0:0:0,-6.0206,-10 0/0:62.2163:11:11:391:0:0:0,-3.31133,-10 0/0:98.3355:23:23:801:0:0:0,-6.92369,-10 0/0:83.2883:18:18:667:0:0:0,-5.41854,-10 0/0:99:28:28:1002:0:0:0,-8.42884,-10 0/0:74.2575:15:15:547:0:0:0,-4.51545,-10 0/0:41.1442:4:4:150:0:0:0,-1.20412,-10 0/0:83.2883:18:18:634:0:0:0,-5.41854,-10 0/0:68.2369:13:13:494:0:0:0,-3.91339,-10 0/0:83.2883:18:18:641:0:0:0,-5.41854,-10 0/0:56.1957:9:9:319:0:0:0,-2.70927,-10 0/0:62.2163:11:11:392:0:0:0,-3.31133,-10 0/0:53.1854:8:8:290:0:0:0,-2.40824,-10 0/0:89.3085:20:20:708:0:0:0,-6.0206,-10 0/0:50.1751:7:7:253:0:0:0,-2.10721,-10 0/0:92.3191:21:21:798:0:0:0,-6.32163,-10 0/0:99:26:26:982:0:0:0,-7.82678,-10 0/0:44.1545:5:5:187:0:0:0,-1.50515,-10 0/0:99:28:28:1037:0:0:0,-8.42884,-10 0/0:68.2369:13:13:493:0:0:0,-3.91339,-10 0/0:53.1854:8:8:298:0:0:0,-2.40824,-10 0/0:99:29:29:1047:0:0:0,-8.72987,-10 0/0:59.206:10:10:358:0:0:0,-3.0103,-10 0/0:68.2369:13:13:464:0:0:0,-3.91339,-10 0/0:77.2678:16:16:606:0:0:0,-4.81648,-10 0/0:68.2369:13:13:488:0:0:0,-3.91339,-10 0/0:65.2266:12:12:447:0:0:0,-3.61236,-10 0/1:99:12:3:114:9:308:-10,0,-9.37006 0/0:71.2472:14:14:500:0:0:0,-4.21442,-10 0/0:47.1648:6:6:199:0:0:0,-1.80618,-10 0/0:68.2369:13:13:472:0:0:0,-3.91339,-10 0/0:35.1236:2:2:76:0:0:0,-0.60206,-7.22 0/0:62.2163:11:11:399:0:0:0,-3.31133,-10 0/0:99:31:30:1076:0:0:0,-9.0309,-10 0/0:71.2472:14:14:495:0:0:0,-4.21442,-10 0/0:74.2575:15:15:567:0:0:0,-4.51545,-10 0/0:71.2472:14:14:531:0:0:0,-4.21442,-10 0/0:68.2369:13:13:462:0:0:0,-3.91339,-10 0/0:50.1751:7:7:264:0:0:0,-2.10721,-10 0/0:71.2472:14:14:493:0:0:0,-4.21442,-10 0/0:59.206:10:10:370:0:0:0,-3.0103,-10 0/0:50.1751:7:7:261:0:0:0,-2.10721,-10 0/0:71.2472:14:14:469:0:0:0,-4.21442,-10 0/0:71.2472:14:14:492:0:0:0,-4.21442,-10 0/0:71.2472:14:14:515:0:0:0,-4.21442,-10 scaffold_67 3893892 . A G 706.341 . AB=0.478261;ABP=3.10471;AC=3;AF=0.0163043;AN=184;AO=31;CIGAR=1X;DP=1366;DPB=1366;DPRA=1.77217;EPP=4.76149;EPPR=5.00884;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9812;NS=92;NUMALT=1;ODDS=1.17339;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1119;QR=48463;RO=1331;RPP=70.3259;RPPR=2893.24;RUN=1;SAF=13;SAP=4.76149;SAR=18;SRF=648;SRP=5.00884;SRR=683;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:29.0633:6:6:208:0:0:0,-1.80618,-10 0/0:41.1045:10:10:346:0:0:0,-3.0103,-10 0/0:50.1354:13:13:480:0:0:0,-3.91339,-10 0/0:44.1148:11:11:373:0:0:0,-3.31133,-10 0/0:41.1045:10:10:361:0:0:0,-3.0103,-10 0/0:38.0942:9:9:336:0:0:0,-2.70927,-10 0/0:92.2794:28:27:989:0:0:0,-8.12781,-10 0/0:74.2178:21:21:774:0:0:0,-6.32163,-10 0/0:41.1045:10:10:372:0:0:0,-3.0103,-10 0/0:17.0221:2:2:76:0:0:0,-0.60206,-7.22 0/0:32.0736:7:7:237:0:0:0,-2.10721,-10 0/0:29.0633:6:6:226:0:0:0,-1.80618,-10 0/0:68.1972:19:19:696:0:0:0,-5.71957,-10 0/0:92.2794:27:27:990:0:0:0,-8.12781,-10 0/0:89.2692:26:26:962:0:0:0,-7.82678,-10 0/0:68.1972:19:19:689:0:0:0,-5.71957,-10 0/0:47.1251:12:12:438:0:0:0,-3.61236,-10 0/0:56.156:15:15:556:0:0:0,-4.51545,-10 0/0:65.1869:18:18:671:0:0:0,-5.41854,-10 0/0:92.2794:27:27:978:0:0:0,-8.12781,-10 0/0:71.2075:20:20:723:0:0:0,-6.0206,-10 0/0:71.2075:20:20:722:0:0:0,-6.0206,-10 0/0:44.1148:11:11:384:0:0:0,-3.31133,-10 0/0:65.1869:18:18:673:0:0:0,-5.41854,-10 0/0:35.0839:8:8:296:0:0:0,-2.40824,-10 0/0:71.2075:20:20:731:0:0:0,-6.0206,-10 0/0:62.1766:17:17:592:0:0:0,-5.11751,-10 0/0:38.0942:9:9:339:0:0:0,-2.70927,-10 0/0:98.2996:29:29:1026:0:0:0,-8.72987,-10 0/0:77.2281:22:22:802:0:0:0,-6.62266,-10 0/0:26.053:5:5:189:0:0:0,-1.50515,-10 0/0:26.053:5:5:184:0:0:0,-1.50515,-10 0/0:47.1251:12:12:451:0:0:0,-3.61236,-10 0/0:38.0942:9:9:341:0:0:0,-2.70927,-10 0/0:50.1354:13:13:469:0:0:0,-3.91339,-10 0/0:20.0324:3:3:114:0:0:0,-0.90309,-10 0/0:23.0427:4:4:148:0:0:0,-1.20412,-10 0/0:65.1869:18:18:671:0:0:0,-5.41854,-10 0/0:32.0736:7:7:260:0:0:0,-2.10721,-10 0/0:62.1766:17:17:629:0:0:0,-5.11751,-10 0/0:62.1766:17:17:642:0:0:0,-5.11751,-10 0/0:56.156:15:15:550:0:0:0,-4.51545,-10 0/0:38.0942:9:9:295:0:0:0,-2.70927,-10 0/0:71.2075:20:20:740:0:0:0,-6.0206,-10 0/0:68.1972:19:19:695:0:0:0,-5.71957,-10 0/0:35.0839:8:8:266:0:0:0,-2.40824,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:47.1251:12:12:402:0:0:0,-3.61236,-10 0/0:53.1457:14:14:532:0:0:0,-4.21442,-10 0/0:89.2692:26:26:948:0:0:0,-7.82678,-10 0/0:41.1045:10:10:356:0:0:0,-3.0103,-10 0/0:89.2692:26:26:959:0:0:0,-7.82678,-10 0/0:32.0736:7:7:239:0:0:0,-2.10721,-10 0/0:32.0736:7:7:254:0:0:0,-2.10721,-10 0/0:95.2896:28:28:1015:0:0:0,-8.42884,-10 0/0:44.1148:11:11:414:0:0:0,-3.31133,-10 0/0:44.1148:11:11:397:0:0:0,-3.31133,-10 0/0:29.0633:6:6:206:0:0:0,-1.80618,-10 1/1:6.71085:19:0:0:19:664:-10,-5.71957,0 0/0:32.0736:7:7:255:0:0:0,-2.10721,-10 0/0:99:36:36:1282:0:0:0,-10,-10 0/0:26.053:5:5:190:0:0:0,-1.50515,-10 0/0:67.4298:35:34:1269:1:38:0,-5.19198,-10 0/0:50.1354:13:13:441:0:0:0,-3.91339,-10 0/0:50.1354:13:13:488:0:0:0,-3.91339,-10 0/0:95.2896:28:28:1000:0:0:0,-8.42884,-10 0/1:99:23:12:449:11:417:-10,0,-10 0/0:44.1148:11:11:411:0:0:0,-3.31133,-10 0/0:95.2896:28:28:1003:0:0:0,-8.42884,-10 0/0:47.1251:12:12:441:0:0:0,-3.61236,-10 0/0:41.1045:10:10:368:0:0:0,-3.0103,-10 0/0:77.2281:22:22:785:0:0:0,-6.62266,-10 0/0:68.1972:19:19:695:0:0:0,-5.71957,-10 0/0:50.1354:13:13:487:0:0:0,-3.91339,-10 0/0:77.2281:23:22:810:0:0:0,-6.62266,-10 0/0:62.1766:17:17:628:0:0:0,-5.11751,-10 0/0:32.0736:8:7:263:0:0:0,-2.10721,-10 0/0:50.1354:13:13:485:0:0:0,-3.91339,-10 0/0:14.0118:1:1:38:0:0:0,-0.30103,-3.8 0/0:44.1148:11:11:409:0:0:0,-3.31133,-10 0/0:86.2589:25:25:877:0:0:0,-7.52575,-10 0/0:50.1354:13:13:457:0:0:0,-3.91339,-10 0/0:65.1869:18:18:641:0:0:0,-5.41854,-10 0/0:53.1457:14:14:508:0:0:0,-4.21442,-10 0/0:65.1869:18:18:665:0:0:0,-5.41854,-10 0/0:35.0839:8:8:292:0:0:0,-2.40824,-10 0/0:47.1251:12:12:437:0:0:0,-3.61236,-10 0/0:35.0839:8:8:304:0:0:0,-2.40824,-10 0/0:23.0427:4:4:152:0:0:0,-1.20412,-10 0/0:59.1663:16:16:593:0:0:0,-4.81648,-10 0/0:53.1457:14:14:521:0:0:0,-4.21442,-10 0/0:35.0839:9:8:279:0:0:0,-2.40824,-10 scaffold_67 4053673 . G A 1125.06 . AB=0.52809;ABP=3.62026;AC=6;AF=0.032967;AN=182;AO=47;CIGAR=1X;DP=1231;DPB=1231;DPRA=1.10406;EPP=16.3625;EPPR=3.12768;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9831;NS=91;NUMALT=1;ODDS=5.02321;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1715;QR=43376;RO=1184;RPP=105.07;RPPR=2565.36;RUN=1;SAF=15;SAP=16.3625;SAR=32;SRF=587;SRP=3.1937;SRR=597;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.0045:10:10:374:0:0:0,-3.0103,-10 0/0:61.056:15:15:566:0:0:0,-4.51545,-10 0/0:46.0045:10:10:379:0:0:0,-3.0103,-10 0/0:39.9839:8:8:298:0:0:0,-2.40824,-10 0/0:52.0251:12:12:456:0:0:0,-3.61236,-10 0/0:39.9839:8:8:302:0:0:0,-2.40824,-10 0/0:76.1075:20:20:746:0:0:0,-6.0206,-10 0/0:46.0045:10:10:366:0:0:0,-3.0103,-10 0/0:46.0045:10:10:352:0:0:0,-3.0103,-10 0/0:30.953:5:5:190:0:0:0,-1.50515,-10 0/0:21.9221:2:2:76:0:0:0,-0.60206,-7.22 0/0:42.9942:9:9:338:0:0:0,-2.70927,-10 0/1:99:30:21:755:9:332:-10,0,-10 0/0:82.128:22:22:742:0:0:0,-6.62266,-10 0/0:61.056:15:15:570:0:0:0,-4.51545,-10 0/0:70.0869:18:18:619:0:0:0,-5.41854,-10 0/0:73.0972:19:19:699:0:0:0,-5.71957,-10 0/0:55.0354:13:13:434:0:0:0,-3.91339,-10 0/0:58.0457:14:14:488:0:0:0,-4.21442,-10 0/0:85.1382:23:23:804:0:0:0,-6.92369,-10 0/1:99:17:10:354:7:259:-10,0,-10 0/0:82.128:22:22:745:0:0:0,-6.62266,-10 0/0:33.9633:6:6:224:0:0:0,-1.80618,-10 0/0:52.0251:12:12:445:0:0:0,-3.61236,-10 0/0:70.0869:18:18:670:0:0:0,-5.41854,-10 0/0:70.0869:18:18:665:0:0:0,-5.41854,-10 0/0:42.9942:9:9:338:0:0:0,-2.70927,-10 0/0:76.1075:20:20:725:0:0:0,-6.0206,-10 0/0:88.1487:24:24:884:0:0:0,-7.22472,-10 0/0:82.128:22:22:768:0:0:0,-6.62266,-10 0/0:42.9942:9:9:337:0:0:0,-2.70927,-10 0/0:39.9839:8:8:280:0:0:0,-2.40824,-10 0/0:42.9942:9:9:342:0:0:0,-2.70927,-10 0/0:52.0251:12:12:452:0:0:0,-3.61236,-10 0/0:42.9942:9:9:329:0:0:0,-2.70927,-10 0/1:0.00298701:7:0:0:7:266:-10,-2.10721,0 0/0:49.0148:11:11:399:0:0:0,-3.31133,-10 0/0:82.128:22:22:825:0:0:0,-6.62266,-10 0/0:42.9942:9:9:319:0:0:0,-2.70927,-10 0/0:49.0148:11:11:417:0:0:0,-3.31133,-10 0/0:88.1487:24:24:898:0:0:0,-7.22472,-10 0/0:39.9839:8:8:299:0:0:0,-2.40824,-10 0/0:39.9839:8:8:276:0:0:0,-2.40824,-10 0/0:91.159:25:25:899:0:0:0,-7.52575,-10 0/0:55.0354:13:13:472:0:0:0,-3.91339,-10 0/0:36.9736:7:7:266:0:0:0,-2.10721,-10 0/0:85.1382:23:23:868:0:0:0,-6.92369,-10 0/0:55.0354:13:13:492:0:0:0,-3.91339,-10 0/0:46.0045:10:10:378:0:0:0,-3.0103,-10 0/0:82.128:22:22:780:0:0:0,-6.62266,-10 0/0:42.9942:9:9:331:0:0:0,-2.70927,-10 0/0:67.0766:17:17:622:0:0:0,-5.11751,-10 0/0:52.0251:12:12:450:0:0:0,-3.61236,-10 0/0:39.9839:8:8:304:0:0:0,-2.40824,-10 0/0:91.159:25:25:880:0:0:0,-7.52575,-10 0/0:61.056:15:15:560:0:0:0,-4.51545,-10 0/0:70.0869:18:18:684:0:0:0,-5.41854,-10 0/0:33.9633:6:6:228:0:0:0,-1.80618,-10 0/1:0.00298701:7:0:0:7:262:-10,-2.10721,0 0/0:58.0457:14:14:524:0:0:0,-4.21442,-10 0/0:55.0354:13:13:493:0:0:0,-3.91339,-10 0/0:55.0354:13:13:484:0:0:0,-3.91339,-10 0/0:91.159:25:25:930:0:0:0,-7.52575,-10 0/0:46.0045:10:10:353:0:0:0,-3.0103,-10 0/0:33.9633:6:6:225:0:0:0,-1.80618,-10 0/0:85.1382:23:23:828:0:0:0,-6.92369,-10 0/1:99:17:5:188:12:430:-10,0,-10 .:.:.:.:.:.:.:. 0/0:73.0972:19:19:670:0:0:0,-5.71957,-10 0/0:27.9427:4:4:149:0:0:0,-1.20412,-10 0/0:30.953:5:5:190:0:0:0,-1.50515,-10 0/0:70.0869:18:18:679:0:0:0,-5.41854,-10 0/0:64.0663:16:16:580:0:0:0,-4.81648,-10 0/0:49.0148:11:11:385:0:0:0,-3.31133,-10 0/0:85.1382:23:23:868:0:0:0,-6.92369,-10 0/0:36.9736:7:7:266:0:0:0,-2.10721,-10 0/0:33.9633:6:6:228:0:0:0,-1.80618,-10 0/0:49.0148:11:11:409:0:0:0,-3.31133,-10 0/0:21.9221:2:2:76:0:0:0,-0.60206,-7.22 0/0:36.9736:7:7:261:0:0:0,-2.10721,-10 0/0:97.1795:27:27:1015:0:0:0,-8.12781,-10 0/0:73.0972:19:19:717:0:0:0,-5.71957,-10 0/1:99:11:6:218:5:166:-10,0,-10 0/0:58.0457:14:14:518:0:0:0,-4.21442,-10 0/0:88.1487:24:24:851:0:0:0,-7.22472,-10 0/0:24.9324:3:3:114:0:0:0,-0.90309,-10 0/0:46.0045:10:10:376:0:0:0,-3.0103,-10 0/0:55.0354:13:13:469:0:0:0,-3.91339,-10 0/0:39.9839:8:8:304:0:0:0,-2.40824,-10 0/0:58.0457:14:14:508:0:0:0,-4.21442,-10 0/0:46.0045:10:10:368:0:0:0,-3.0103,-10 0/0:46.0045:10:10:373:0:0:0,-3.0103,-10 scaffold_67 4099467 . G A 17063.6 . AB=0.535398;ABP=7.92974;AC=83;AF=0.451087;AN=184;AO=605;CIGAR=1X;DP=1357;DPB=1357;DPRA=1.07611;EPP=4.90899;EPPR=3.19511;GTI=3;LEN=1;MEANALT=1;MQM=59.6463;MQMR=59.8883;NS=92;NUMALT=1;ODDS=0.13899;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=22153;QR=27605;RO=752;RPP=1316.75;RPPR=1635.96;RUN=1;SAF=314;SAP=4.90899;SAR=291;SRF=380;SRP=3.19511;SRR=372;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:12.973:15:14:486:1:36:-0.260641,0,-10 0/0:19.4959:5:5:177:0:0:0,-1.50515,-10 0/1:99:13:4:150:9:342:-10,0,-10 1/1:26.8814:9:0:0:9:339:-10,-2.70927,0 0/0:34.5474:10:10:378:0:0:0,-3.0103,-10 0/1:0.299401:2:0:0:2:76:-7.22,-0.60206,0 0/1:99:32:12:429:20:700:-10,0,-10 0/1:99:22:11:413:11:401:-10,0,-10 1/1:38.9226:13:0:0:13:471:-10,-3.91339,0 1/1:11.8299:4:0:0:4:152:-10,-1.20412,0 1/1:14.8402:5:0:0:5:167:-10,-1.50515,0 1/1:14.8402:5:0:0:5:189:-10,-1.50515,0 0/1:74.8583:24:3:113:21:764:-10,0,-6.62816 0/1:99:26:15:567:11:399:-10,0,-10 0/1:99:17:8:300:9:341:-10,0,-10 1/1:41.9329:14:0:0:14:529:-10,-4.21442,0 0/0:49.5989:15:15:538:0:0:0,-4.51545,-10 1/1:20.8608:7:0:0:7:256:-10,-2.10721,0 0/1:99:11:5:166:6:225:-10,0,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 1/1:56.9844:19:0:0:19:710:-10,-5.71957,0 0/1:99:24:9:336:15:541:-10,0,-10 1/1:26.8814:9:0:0:9:331:-10,-2.70927,0 0/0:61.6401:19:19:671:0:0:0,-5.71957,-10 1/1:53.9741:18:0:0:18:647:-10,-5.41854,0 0/0:16.2141:20:19:704:1:38:0,-0.91957,-10 0/0:40.568:12:12:431:0:0:0,-3.61236,-10 1/1:29.8917:10:0:0:10:354:-10,-3.0103,0 1/1:35.9123:12:0:0:12:453:-10,-3.61236,0 0/1:99:27:14:519:13:446:-10,0,-10 0/1:0.299401:2:0:0:2:76:-7.22,-0.60206,0 0/0:19.4959:5:5:187:0:0:0,-1.50515,-10 0/0:49.5989:15:15:566:0:0:0,-4.51545,-10 0/0:34.5474:10:10:344:0:0:0,-3.0103,-10 0/0:43.5783:13:13:494:0:0:0,-3.91339,-10 0/0:19.4959:5:5:187:0:0:0,-1.50515,-10 0/0:19.4959:5:5:190:0:0:0,-1.50515,-10 0/0:37.5577:11:11:416:0:0:0,-3.31133,-10 1/1:44.9432:15:0:0:15:532:-10,-4.51545,0 0/1:99:10:5:186:5:176:-10,0,-10 0/1:99:33:18:681:15:563:-10,0,-10 1/1:53.9741:18:0:0:18:668:-10,-5.41854,0 1/1:69.0256:23:0:0:23:860:-10,-6.92369,0 0/1:99:28:14:495:14:477:-10,0,-10 0/0:49.5989:15:15:566:0:0:0,-4.51545,-10 0/0:25.5165:7:7:265:0:0:0,-2.10721,-10 0/0:99:37:37:1375:0:0:0,-10,-10 0/0:70.671:22:22:812:0:0:0,-6.62266,-10 0/0:31.5371:9:9:316:0:0:0,-2.70927,-10 0/1:99:29:12:445:17:645:-10,0,-10 1/1:26.8814:9:0:0:9:342:-10,-2.70927,0 0/1:99:24:12:434:12:415:-10,0,-10 0/0:28.5268:8:8:303:0:0:0,-2.40824,-10 0/0:19.4959:5:5:188:0:0:0,-1.50515,-10 0/0:97.7606:31:31:1129:0:0:0,-9.33193,-10 0/0:25.5165:7:7:263:0:0:0,-2.10721,-10 0/0:64.6504:20:20:706:0:0:0,-6.0206,-10 0/1:0.620981:3:0:0:3:114:-10,-0.90309,0 0/0:34.5474:10:10:368:0:0:0,-3.0103,-10 1/1:26.8814:9:0:0:9:337:-10,-2.70927,0 0/0:99:32:32:1172:0:0:0,-9.63296,-10 0/0:31.5371:9:9:329:0:0:0,-2.70927,-10 1/1:43.2983:31:1:38:30:1098:-10,-4.04057,0 0/0:52.6092:16:16:579:0:0:0,-4.81648,-10 0/0:37.5577:11:11:404:0:0:0,-3.31133,-10 1/1:69.0256:23:0:0:23:867:-10,-6.92369,0 0/1:99:10:7:265:3:114:-9.70888,0,-10 0/0:49.5989:15:15:547:0:0:0,-4.51545,-10 0/1:99:20:8:299:12:453:-10,0,-10 1/1:23.8711:8:0:0:8:293:-10,-2.40824,0 0/0:52.6092:16:16:592:0:0:0,-4.81648,-10 0/0:58.6298:18:18:675:0:0:0,-5.41854,-10 0/0:49.5989:15:15:553:0:0:0,-4.51545,-10 0/0:55.6195:17:17:626:0:0:0,-5.11751,-10 0/0:61.6401:19:19:694:0:0:0,-5.71957,-10 1/1:20.8608:7:0:0:7:243:-10,-2.10721,0 1/1:41.9329:14:0:0:14:530:-10,-4.21442,0 1/1:26.8814:9:0:0:9:333:-10,-2.70927,0 0/0:19.4959:5:5:178:0:0:0,-1.50515,-10 1/1:26.8814:9:0:0:9:326:-10,-2.70927,0 0/1:99:15:10:356:5:188:-10,0,-10 1/1:50.9638:17:0:0:17:600:-10,-5.11751,0 0/1:99:22:8:280:14:524:-10,0,-10 0/1:99:10:4:152:6:227:-10,0,-10 0/1:99:19:10:370:9:317:-10,0,-10 1/1:8.81959:3:0:0:3:113:-10,-0.90309,0 1/1:69.0256:23:0:0:23:825:-10,-6.92369,0 0/0:34.5474:10:10:370:0:0:0,-3.0103,-10 1/1:8.81959:3:0:0:3:113:-10,-0.90309,0 0/1:99:14:7:266:7:255:-10,0,-10 1/1:50.9638:17:0:0:17:622:-10,-5.11751,0 0/0:37.5577:11:11:406:0:0:0,-3.31133,-10 scaffold_67 4113443 . T G 1207.46 . AB=0.652778;ABP=17.6074;AC=4;AF=0.021978;AN=182;AO=47;CIGAR=1X;DP=1319;DPB=1319;DPRA=1.25581;EPP=3.0565;EPPR=3.03761;GTI=1;LEN=1;MEANALT=1;MQM=46.4681;MQMR=56.3097;NS=91;NUMALT=1;ODDS=0.821769;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1749;QR=46666;RO=1272;RPP=105.07;RPPR=2678.95;RUN=1;SAF=23;SAP=3.0565;SAR=24;SRF=648;SRP=3.99361;SRR=624;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.909:14:14:507:0:0:0,-4.21442,-10 0/0:22.8163:5:5:190:0:0:0,-1.50515,-10 0/0:46.8987:13:13:492:0:0:0,-3.91339,-10 0/0:28.8369:7:7:256:0:0:0,-2.10721,-10 0/0:49.909:14:14:523:0:0:0,-4.21442,-10 0/0:28.8369:7:7:264:0:0:0,-2.10721,-10 0/1:99:32:14:530:18:675:-10,0,-10 0/0:37.8678:10:10:378:0:0:0,-3.0103,-10 0/0:40.8781:11:11:414:0:0:0,-3.31133,-10 .:.:.:.:.:.:.:. 0/0:31.8472:8:8:273:0:0:0,-2.40824,-10 0/0:31.8472:8:8:296:0:0:0,-2.40824,-10 0/0:55.9296:16:16:607:0:0:0,-4.81648,-10 0/0:86.0326:26:26:959:0:0:0,-7.82678,-10 0/0:73.9914:22:22:808:0:0:0,-6.62266,-10 0/0:58.9399:17:17:631:0:0:0,-5.11751,-10 0/1:99:14:9:300:5:185:-10,0,-10 0/0:22.8163:5:5:189:0:0:0,-1.50515,-10 0/0:64.9605:19:19:680:0:0:0,-5.71957,-10 0/0:99:31:31:1119:0:0:0,-9.33193,-10 0/0:37.8678:10:10:345:0:0:0,-3.0103,-10 0/0:61.9502:18:18:637:0:0:0,-5.41854,-10 0/0:34.8575:9:9:340:0:0:0,-2.70927,-10 0/0:46.8987:13:13:472:0:0:0,-3.91339,-10 0/0:49.909:14:14:523:0:0:0,-4.21442,-10 0/0:67.9708:20:20:730:0:0:0,-6.0206,-10 0/0:37.8678:10:10:331:0:0:0,-3.0103,-10 0/0:34.8575:9:9:342:0:0:0,-2.70927,-10 0/0:49.909:14:14:520:0:0:0,-4.21442,-10 0/0:98.0732:30:30:1063:0:0:0,-9.0309,-10 0/0:16.7957:3:3:113:0:0:0,-0.90309,-10 0/0:25.8266:6:6:223:0:0:0,-1.80618,-10 0/0:67.9708:20:20:740:0:0:0,-6.0206,-10 0/0:37.8678:10:10:378:0:0:0,-3.0103,-10 0/0:58.9399:17:17:619:0:0:0,-5.11751,-10 0/0:31.8472:8:8:256:0:0:0,-2.40824,-10 0/0:37.8678:10:10:380:0:0:0,-3.0103,-10 0/0:95.0616:29:29:1024:0:0:0,-8.72987,-10 0/0:40.8781:11:11:403:0:0:0,-3.31133,-10 0/0:40.8781:11:11:377:0:0:0,-3.31133,-10 0/0:77.0017:23:23:854:0:0:0,-6.92369,-10 0/0:52.9193:15:15:547:0:0:0,-4.51545,-10 0/0:67.9708:20:20:711:0:0:0,-6.0206,-10 0/0:86.0326:26:26:963:0:0:0,-7.82678,-10 0/0:46.8987:13:13:481:0:0:0,-3.91339,-10 0/0:31.8472:8:8:279:0:0:0,-2.40824,-10 0/0:99:36:36:1308:0:0:0,-10,-10 0/0:55.9296:16:16:571:0:0:0,-4.81648,-10 0/0:25.8266:6:6:223:0:0:0,-1.80618,-10 0/0:98.0732:30:30:1127:0:0:0,-9.0309,-10 0/0:25.8266:6:6:226:0:0:0,-1.80618,-10 0/0:73.9914:22:22:824:0:0:0,-6.62266,-10 0/0:28.8369:7:7:266:0:0:0,-2.10721,-10 0/0:31.8472:8:8:292:0:0:0,-2.40824,-10 0/0:64.9605:19:19:696:0:0:0,-5.71957,-10 0/0:31.8472:8:8:303:0:0:0,-2.40824,-10 0/0:52.9193:15:15:566:0:0:0,-4.51545,-10 0/0:34.8575:9:9:327:0:0:0,-2.70927,-10 0/0:61.9502:18:18:679:0:0:0,-5.41854,-10 0/0:28.8369:7:7:263:0:0:0,-2.10721,-10 0/0:86.0326:26:26:981:0:0:0,-7.82678,-10 0/0:34.8575:9:9:319:0:0:0,-2.70927,-10 0/0:61.9502:18:18:673:0:0:0,-5.41854,-10 0/0:64.9605:19:19:707:0:0:0,-5.71957,-10 0/0:34.8575:9:9:329:0:0:0,-2.70927,-10 0/0:83.0222:25:25:917:0:0:0,-7.52575,-10 0/0:70.9811:21:21:772:0:0:0,-6.32163,-10 0/0:19.806:4:4:141:0:0:0,-1.20412,-10 0/0:98.0732:30:30:1072:0:0:0,-9.0309,-10 0/0:52.9193:15:15:555:0:0:0,-4.51545,-10 0/0:43.8884:12:12:445:0:0:0,-3.61236,-10 0/0:92.053:28:28:1045:0:0:0,-8.42884,-10 0/0:58.9399:17:17:623:0:0:0,-5.11751,-10 0/0:40.8781:11:11:411:0:0:0,-3.31133,-10 0/0:58.9399:17:17:637:0:0:0,-5.11751,-10 0/0:34.8575:9:9:331:0:0:0,-2.70927,-10 0/0:43.8884:12:12:452:0:0:0,-3.61236,-10 0/0:40.8781:11:11:405:0:0:0,-3.31133,-10 0/0:13.7854:2:2:76:0:0:0,-0.60206,-7.22 0/0:22.8163:5:5:190:0:0:0,-1.50515,-10 0/0:83.0222:25:25:908:0:0:0,-7.52575,-10 0/0:70.9811:21:21:788:0:0:0,-6.32163,-10 0/0:52.9193:15:15:552:0:0:0,-4.51545,-10 0/0:58.9399:17:17:599:0:0:0,-5.11751,-10 0/0:73.9914:22:22:830:0:0:0,-6.62266,-10 0/0:13.7854:2:2:76:0:0:0,-0.60206,-7.22 0/0:37.8678:10:10:380:0:0:0,-3.0103,-10 0/0:28.8369:7:7:252:0:0:0,-2.10721,-10 0/0:13.7854:2:2:76:0:0:0,-0.60206,-7.22 0/1:95.8788:12:2:75:10:380:-10,0,-5.33218 0/0:34.8575:9:9:311:0:0:0,-2.70927,-10 0/1:1.22582:14:0:0:14:509:-10,-4.21442,0 scaffold_67 4137082 . G C 47.5905 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1X;DP=1187;DPB=1187;DPRA=0.810463;EPP=16.0391;EPPR=3.23278;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9585;NS=92;NUMALT=1;ODDS=1.61366;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=221;QR=43097;RO=1181;RPP=16.0391;RPPR=2567.52;RUN=1;SAF=6;SAP=16.0391;SAR=0;SRF=596;SRP=3.23278;SRR=585;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.6036:9:9:331:0:0:0,-2.70927,-10 0/0:69.6036:9:9:328:0:0:0,-2.70927,-10 0/0:84.6551:14:14:530:0:0:0,-4.21442,-10 0/0:78.6345:12:12:414:0:0:0,-3.61236,-10 0/0:66.5933:8:8:291:0:0:0,-2.40824,-10 0/0:60.5727:6:6:204:0:0:0,-1.80618,-10 0/0:99:22:22:791:0:0:0,-6.62266,-10 0/0:99:19:19:714:0:0:0,-5.71957,-10 0/0:66.5933:8:8:268:0:0:0,-2.40824,-10 0/0:45.5212:1:1:38:0:0:0,-0.30103,-3.8 0/0:51.5418:3:3:112:0:0:0,-0.90309,-10 0/0:60.5727:6:6:201:0:0:0,-1.80618,-10 0/0:99:22:22:806:0:0:0,-6.62266,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:75.6242:11:11:358:0:0:0,-3.31133,-10 0/0:90.6752:16:16:540:0:0:0,-4.81648,-10 0/0:81.6447:13:13:480:0:0:0,-3.91339,-10 0/0:60.5727:6:6:171:0:0:0,-1.80618,-10 0/0:99:19:19:715:0:0:0,-5.71957,-10 0/0:90.6752:16:16:604:0:0:0,-4.81648,-10 0/0:87.6652:15:15:559:0:0:0,-4.51545,-10 0/0:87.6652:15:15:538:0:0:0,-4.51545,-10 0/0:72.6139:10:10:356:0:0:0,-3.0103,-10 0/0:99:19:19:716:0:0:0,-5.71957,-10 0/0:81.6447:13:13:485:0:0:0,-3.91339,-10 0/0:69.6036:9:9:337:0:0:0,-2.70927,-10 0/0:66.5933:8:8:304:0:0:0,-2.40824,-10 0/0:72.6139:10:10:375:0:0:0,-3.0103,-10 0/0:78.6345:12:12:455:0:0:0,-3.61236,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:48.5315:2:2:75:0:0:0,-0.60206,-7.125 0/0:72.6139:10:10:365:0:0:0,-3.0103,-10 0/0:78.6345:12:12:449:0:0:0,-3.61236,-10 0/0:72.6139:10:10:380:0:0:0,-3.0103,-10 0/0:63.583:7:7:237:0:0:0,-2.10721,-10 0/0:63.583:7:7:241:0:0:0,-2.10721,-10 0/0:66.5933:8:8:257:0:0:0,-2.40824,-10 0/0:99:19:19:697:0:0:0,-5.71957,-10 0/0:69.6036:9:9:327:0:0:0,-2.70927,-10 0/1:47.5905:8:4:149:4:152:-10,0,-10 0/0:99:22:22:776:0:0:0,-6.62266,-10 0/0:90.6752:16:16:571:0:0:0,-4.81648,-10 0/0:72.6139:10:10:351:0:0:0,-3.0103,-10 0/0:0.78867:13:11:400:2:69:-4.5337,0,-10 0/0:72.6139:10:10:380:0:0:0,-3.0103,-10 0/0:75.6242:11:11:409:0:0:0,-3.31133,-10 0/0:99:26:26:971:0:0:0,-7.82678,-10 0/0:90.6752:16:16:593:0:0:0,-4.81648,-10 0/0:84.6551:14:14:520:0:0:0,-4.21442,-10 0/0:99:29:29:1032:0:0:0,-8.72987,-10 0/0:54.5521:4:4:141:0:0:0,-1.20412,-10 0/0:99:24:24:896:0:0:0,-7.22472,-10 0/0:72.6139:10:10:363:0:0:0,-3.0103,-10 0/0:63.583:7:7:263:0:0:0,-2.10721,-10 0/0:99:21:21:739:0:0:0,-6.32163,-10 0/0:78.6345:12:12:442:0:0:0,-3.61236,-10 0/0:81.6447:13:13:477:0:0:0,-3.91339,-10 0/0:69.6036:9:9:341:0:0:0,-2.70927,-10 0/0:72.6139:10:10:374:0:0:0,-3.0103,-10 0/0:69.6036:9:9:267:0:0:0,-2.70927,-10 0/0:99:23:23:797:0:0:0,-6.92369,-10 0/0:72.6139:10:10:375:0:0:0,-3.0103,-10 0/0:99:34:34:1271:0:0:0,-10,-10 0/0:66.5933:8:8:304:0:0:0,-2.40824,-10 0/0:54.5521:4:4:152:0:0:0,-1.20412,-10 0/0:90.6752:16:16:595:0:0:0,-4.81648,-10 0/0:66.5933:8:8:299:0:0:0,-2.40824,-10 0/0:69.6036:9:9:336:0:0:0,-2.70927,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 0/0:57.5624:5:5:184:0:0:0,-1.50515,-10 0/0:84.6551:14:14:488:0:0:0,-4.21442,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:99:20:20:755:0:0:0,-6.0206,-10 0/0:69.6036:9:9:341:0:0:0,-2.70927,-10 0/0:93.6851:17:17:579:0:0:0,-5.11751,-10 0/0:78.6345:12:12:448:0:0:0,-3.61236,-10 0/0:57.5624:5:5:190:0:0:0,-1.50515,-10 0/0:72.6139:10:10:378:0:0:0,-3.0103,-10 0/0:51.5418:3:3:114:0:0:0,-0.90309,-10 0/0:57.5624:5:5:185:0:0:0,-1.50515,-10 0/0:99:21:21:770:0:0:0,-6.32163,-10 0/0:99:20:20:759:0:0:0,-6.0206,-10 0/0:99:22:22:812:0:0:0,-6.62266,-10 0/0:96.6945:18:18:668:0:0:0,-5.41854,-10 0/0:81.6447:13:13:444:0:0:0,-3.91339,-10 0/0:54.5521:4:4:138:0:0:0,-1.20412,-10 0/0:75.6242:11:11:416:0:0:0,-3.31133,-10 0/0:84.6551:14:14:490:0:0:0,-4.21442,-10 0/0:51.5418:3:3:114:0:0:0,-0.90309,-10 0/0:72.6139:10:10:370:0:0:0,-3.0103,-10 0/0:81.6447:13:13:473:0:0:0,-3.91339,-10 0/0:75.6242:11:11:395:0:0:0,-3.31133,-10 scaffold_86 109329 . A G 142.553 . AB=0.411765;ABP=4.1599;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1311;DPB=1311;DPRA=0.874806;EPP=3.0103;EPPR=6.09643;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9516;NS=92;NUMALT=1;ODDS=8.54434;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=48049;RO=1301;RPP=20.3821;RPPR=2733.36;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=661;SRP=3.74636;SRR=640;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:77.6928:14:14:531:0:0:0,-4.21442,-10 0/0:37.1098:8:7:252:1:14:0,-0.10515,-10 0/0:95.7554:20:20:737:0:0:0,-6.0206,-10 0/0:65.6516:10:10:350:0:0:0,-3.0103,-10 0/0:50.6001:5:5:190:0:0:0,-1.50515,-10 0/0:50.6001:5:5:167:0:0:0,-1.50515,-10 0/0:99:24:24:909:0:0:0,-7.22472,-10 0/0:89.7337:18:18:680:0:0:0,-5.41854,-10 0/0:68.6619:11:11:413:0:0:0,-3.31133,-10 0/0:38.5589:1:1:38:0:0:0,-0.30103,-3.8 0/0:50.6001:5:5:186:0:0:0,-1.50515,-10 0/0:47.5898:4:4:139:0:0:0,-1.20412,-10 0/0:99:22:22:822:0:0:0,-6.62266,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:99:32:32:1186:0:0:0,-9.63296,-10 0/0:98.7664:21:21:787:0:0:0,-6.32163,-10 0/0:77.6928:14:14:528:0:0:0,-4.21442,-10 0/0:50.6001:5:5:189:0:0:0,-1.50515,-10 0/1:99:17:10:316:7:256:-10,0,-10 0/0:92.7437:19:19:702:0:0:0,-5.71957,-10 0/0:77.6928:14:14:532:0:0:0,-4.21442,-10 0/0:92.7437:20:19:715:0:0:0,-5.71957,-10 0/0:47.5898:4:4:152:0:0:0,-1.20412,-10 0/0:74.6825:13:13:492:0:0:0,-3.91339,-10 0/0:62.6413:9:9:339:0:0:0,-2.70927,-10 0/0:89.7337:18:18:660:0:0:0,-5.41854,-10 0/0:56.6207:7:7:254:0:0:0,-2.10721,-10 0/0:62.6413:9:9:342:0:0:0,-2.70927,-10 0/0:80.7031:15:15:515:0:0:0,-4.51545,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:47.5898:4:4:152:0:0:0,-1.20412,-10 0/0:53.6104:6:6:219:0:0:0,-1.80618,-10 0/0:99:24:24:875:0:0:0,-7.22472,-10 0/0:59.631:8:8:298:0:0:0,-2.40824,-10 0/0:89.7337:18:18:673:0:0:0,-5.41854,-10 0/0:59.631:8:8:294:0:0:0,-2.40824,-10 0/0:65.6516:10:10:366:0:0:0,-3.0103,-10 0/0:99:23:23:871:0:0:0,-6.92369,-10 0/0:62.6413:9:9:333:0:0:0,-2.70927,-10 0/0:80.7031:15:15:570:0:0:0,-4.51545,-10 0/0:77.6928:14:14:532:0:0:0,-4.21442,-10 0/0:71.6722:12:12:450:0:0:0,-3.61236,-10 0/0:71.6722:12:12:456:0:0:0,-3.61236,-10 0/0:99:23:23:867:0:0:0,-6.92369,-10 0/0:99:26:26:975:0:0:0,-7.82678,-10 0/0:65.6516:10:10:368:0:0:0,-3.0103,-10 0/0:99:33:33:1229:0:0:0,-9.93399,-10 0/0:89.7337:18:18:675:0:0:0,-5.41854,-10 0/0:59.631:8:8:291:0:0:0,-2.40824,-10 0/0:99:27:27:984:0:0:0,-8.12781,-10 0/0:47.5898:4:4:152:0:0:0,-1.20412,-10 0/0:99:24:24:885:0:0:0,-7.22472,-10 0/0:56.6207:7:7:242:0:0:0,-2.10721,-10 0/0:53.6104:6:6:226:0:0:0,-1.80618,-10 0/0:99:30:30:1101:0:0:0,-9.0309,-10 0/0:68.6619:11:11:415:0:0:0,-3.31133,-10 0/0:83.7133:16:16:570:0:0:0,-4.81648,-10 0/0:62.6413:9:9:342:0:0:0,-2.70927,-10 0/0:92.7437:19:19:695:0:0:0,-5.71957,-10 0/0:59.631:8:8:302:0:0:0,-2.40824,-10 0/0:92.7437:19:19:696:0:0:0,-5.71957,-10 0/0:83.7133:16:16:604:0:0:0,-4.81648,-10 0/0:99:28:28:963:0:0:0,-8.42884,-10 0/0:77.6928:14:14:510:0:0:0,-4.21442,-10 0/0:59.631:8:8:288:0:0:0,-2.40824,-10 0/0:99:28:28:1039:0:0:0,-8.42884,-10 0/0:59.631:8:8:276:0:0:0,-2.40824,-10 0/0:65.6516:10:10:380:0:0:0,-3.0103,-10 0/0:98.7664:21:21:740:0:0:0,-6.32163,-10 0/0:59.631:8:8:304:0:0:0,-2.40824,-10 0/0:74.6825:13:13:492:0:0:0,-3.91339,-10 0/0:77.6928:14:14:532:0:0:0,-4.21442,-10 0/0:99:23:23:830:0:0:0,-6.92369,-10 0/0:56.6207:7:7:266:0:0:0,-2.10721,-10 0/0:95.7554:20:20:757:0:0:0,-6.0206,-10 0/0:65.6516:10:10:371:0:0:0,-3.0103,-10 0/0:68.6619:11:11:415:0:0:0,-3.31133,-10 0/0:74.6825:13:13:484:0:0:0,-3.91339,-10 0/0:53.6104:6:6:227:0:0:0,-1.80618,-10 0/0:50.6001:5:5:187:0:0:0,-1.50515,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:92.7437:19:19:711:0:0:0,-5.71957,-10 0/0:86.7235:17:17:642:0:0:0,-5.11751,-10 0/0:86.7235:17:17:597:0:0:0,-5.11751,-10 0/0:86.7235:17:17:628:0:0:0,-5.11751,-10 0/0:50.6001:5:5:185:0:0:0,-1.50515,-10 0/0:80.7031:15:15:567:0:0:0,-4.51545,-10 0/0:80.7031:15:15:565:0:0:0,-4.51545,-10 0/0:50.6001:5:5:189:0:0:0,-1.50515,-10 0/0:74.6825:14:13:489:0:0:0,-3.91339,-10 0/0:65.6516:10:10:332:0:0:0,-3.0103,-10 0/0:68.6619:11:11:383:0:0:0,-3.31133,-10 scaffold_86 306047 . C G 627.258 . AB=0.574468;ABP=5.27418;AC=2;AF=0.0108696;AN=184;AO=27;CIGAR=1X;DP=2103;DPB=2103;DPRA=1.0287;EPP=6.95112;EPPR=6.06924;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9696;NS=92;NUMALT=1;ODDS=6.37117;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=956;QR=75278;RO=2070;RPP=61.6401;RPPR=4497.96;RUN=1;SAF=17;SAP=6.95112;SAR=10;SRF=1062;SRP=6.06924;SRR=1008;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:75.8527:17:17:602:0:0:0,-5.11751,-10 0/0:84.8835:20:20:752:0:0:0,-6.0206,-10 0/0:75.8527:17:17:636:0:0:0,-5.11751,-10 0/0:93.9136:23:23:841:0:0:0,-6.92369,-10 0/0:72.8424:16:16:588:0:0:0,-4.81648,-10 0/0:51.7703:9:9:335:0:0:0,-2.70927,-10 0/0:99:56:55:2012:0:0:0,-10,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:84.8835:20:20:730:0:0:0,-6.0206,-10 0/0:27.6879:1:1:36:0:0:0,-0.30103,-3.6 0/0:51.7703:9:9:331:0:0:0,-2.70927,-10 0/0:48.76:8:8:297:0:0:0,-2.40824,-10 0/0:99:39:38:1367:0:0:0,-10,-10 0/0:99:44:44:1603:0:0:0,-10,-10 0/0:99:34:34:1242:0:0:0,-10,-10 0/0:90.9038:22:22:815:0:0:0,-6.62266,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:60.8012:12:12:432:0:0:0,-3.61236,-10 0/0:90.9038:22:22:778:0:0:0,-6.62266,-10 0/0:99:44:44:1606:0:0:0,-10,-10 0/0:72.8424:16:16:602:0:0:0,-4.81648,-10 0/0:99:42:42:1537:0:0:0,-10,-10 0/0:39.7291:5:5:189:0:0:0,-1.50515,-10 0/0:99:36:36:1349:0:0:0,-10,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:99:29:29:1050:0:0:0,-8.72987,-10 0/0:54.7806:10:10:380:0:0:0,-3.0103,-10 0/0:66.8218:14:14:498:0:0:0,-4.21442,-10 0/0:99:33:33:1153:0:0:0,-9.93399,-10 0/0:99:38:38:1367:0:0:0,-10,-10 0/0:54.7806:10:10:376:0:0:0,-3.0103,-10 0/0:30.6982:2:2:54:0:0:0,-0.60206,-5.13 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:87.8937:21:21:750:0:0:0,-6.32163,-10 0/0:96.923:24:24:844:0:0:0,-7.22472,-10 0/0:54.7806:10:10:377:0:0:0,-3.0103,-10 0/0:66.8218:15:14:527:0:0:0,-4.21442,-10 0/0:99:29:29:1030:0:0:0,-8.72987,-10 0/0:72.8424:16:16:574:0:0:0,-4.81648,-10 0/0:57.7909:11:11:410:0:0:0,-3.31133,-10 0/0:99:36:36:1268:0:0:0,-10,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:84.8835:20:20:714:0:0:0,-6.0206,-10 0/0:99:41:41:1482:0:0:0,-10,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:48.76:8:8:297:0:0:0,-2.40824,-10 0/0:99:52:52:1910:0:0:0,-10,-10 0/0:99:35:34:1262:0:0:0,-10,-10 0/0:66.8218:14:14:529:0:0:0,-4.21442,-10 0/0:99:36:36:1297:0:0:0,-10,-10 0/0:63.8115:13:13:486:0:0:0,-3.91339,-10 0/0:99:48:48:1706:0:0:0,-10,-10 0/0:60.8012:12:12:441:0:0:0,-3.61236,-10 0/0:57.7909:11:11:416:0:0:0,-3.31133,-10 0/0:99:51:51:1869:0:0:0,-10,-10 0/0:75.8527:17:17:583:0:0:0,-5.11751,-10 0/0:78.863:18:18:660:0:0:0,-5.41854,-10 0/0:66.8218:14:14:514:0:0:0,-4.21442,-10 0/0:51.7703:9:9:293:0:0:0,-2.70927,-10 0/0:66.8218:14:14:531:0:0:0,-4.21442,-10 0/0:99:30:30:1101:0:0:0,-9.0309,-10 0/0:75.8527:17:17:621:0:0:0,-5.11751,-10 0/0:99:53:53:1945:0:0:0,-10,-10 0/0:99:27:27:968:0:0:0,-8.12781,-10 0/0:93.9136:23:23:804:0:0:0,-6.92369,-10 0/0:99:32:32:1167:0:0:0,-9.63296,-10 0/0:99:34:34:1250:0:0:0,-10,-10 0/0:57.7909:11:11:409:0:0:0,-3.31133,-10 0/0:99:45:45:1642:0:0:0,-10,-10 0/0:54.7806:10:10:372:0:0:0,-3.0103,-10 0/0:81.8733:19:19:695:0:0:0,-5.71957,-10 0/0:99:31:31:1103:0:0:0,-9.33193,-10 0/0:87.8937:21:21:771:0:0:0,-6.32163,-10 0/1:0.00220775:14:0:0:14:502:-10,-4.21442,0 0/1:99:33:20:735:13:454:-10,0,-10 0/0:72.8424:16:16:568:0:0:0,-4.81648,-10 0/0:45.7497:7:7:252:0:0:0,-2.10721,-10 0/0:78.863:18:18:653:0:0:0,-5.41854,-10 0/0:30.6982:2:2:50:0:0:0,-0.60206,-4.75 0/0:66.8218:14:14:492:0:0:0,-4.21442,-10 0/0:99:35:35:1241:0:0:0,-10,-10 0/0:99:32:32:1140:0:0:0,-9.63296,-10 0/0:90.9038:22:22:824:0:0:0,-6.62266,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:99:25:25:914:0:0:0,-7.52575,-10 0/0:42.7394:6:6:224:0:0:0,-1.80618,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:84.8835:20:20:734:0:0:0,-6.0206,-10 0/0:45.7497:7:7:241:0:0:0,-2.10721,-10 0/0:66.8218:15:14:503:0:0:0,-4.21442,-10 0/0:81.8733:20:19:688:0:0:0,-5.71957,-10 0/0:69.8321:15:15:551:0:0:0,-4.51545,-10 scaffold_86 306059 . T C 1875.41 . AB=0.490741;ABP=3.09072;AC=6;AF=0.0326087;AN=184;AO=73;CIGAR=1X;DP=2104;DPB=2104;DPRA=1.12713;EPP=4.46786;EPPR=6.73206;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.969;NS=92;NUMALT=1;ODDS=0.925543;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2650;QR=75112;RO=2031;RPP=161.528;RPPR=4413.27;RUN=1;SAF=40;SAP=4.46786;SAR=33;SRF=1045;SRP=6.73206;SRR=986;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.6649:17:17:621:0:0:0,-5.11751,-10 0/0:79.6958:20:20:734:0:0:0,-6.0206,-10 0/0:70.6649:17:17:640:0:0:0,-5.11751,-10 0/0:88.7266:23:23:867:0:0:0,-6.92369,-10 0/0:67.6546:16:16:603:0:0:0,-4.81648,-10 0/0:46.5825:9:9:335:0:0:0,-2.70927,-10 0/0:99:56:56:2036:0:0:0,-10,-10 0/1:99:30:16:582:14:504:-10,0,-10 1/1:13.5399:20:0:0:20:721:-10,-6.0206,0 0/0:22.5001:1:1:38:0:0:0,-0.30103,-3.8 0/0:46.5825:9:9:320:0:0:0,-2.70927,-10 0/0:43.5722:8:8:298:0:0:0,-2.40824,-10 0/0:99:39:39:1444:0:0:0,-10,-10 0/0:99:44:44:1626:0:0:0,-10,-10 0/0:99:34:34:1266:0:0:0,-10,-10 0/0:85.7163:22:22:810:0:0:0,-6.62266,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:55.6134:12:12:452:0:0:0,-3.61236,-10 0/0:85.7163:22:22:814:0:0:0,-6.62266,-10 0/0:99:44:44:1649:0:0:0,-10,-10 0/0:67.6546:16:16:589:0:0:0,-4.81648,-10 0/0:99:42:42:1584:0:0:0,-10,-10 0/0:34.5413:5:5:190:0:0:0,-1.50515,-10 0/0:99:36:36:1334:0:0:0,-10,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:99:29:29:1076:0:0:0,-8.72987,-10 0/0:49.5928:10:10:378:0:0:0,-3.0103,-10 0/0:61.634:14:14:508:0:0:0,-4.21442,-10 0/0:99:33:33:1239:0:0:0,-9.93399,-10 0/0:99:38:38:1386:0:0:0,-10,-10 0/0:49.5928:10:10:360:0:0:0,-3.0103,-10 0/0:25.5104:2:2:69:0:0:0,-0.60206,-6.555 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/0:82.7061:21:21:789:0:0:0,-6.32163,-10 0/0:91.7353:24:24:860:0:0:0,-7.22472,-10 0/0:49.5928:10:10:380:0:0:0,-3.0103,-10 0/0:64.6443:15:15:541:0:0:0,-4.51545,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:67.6546:16:16:600:0:0:0,-4.81648,-10 0/0:52.6031:11:11:417:0:0:0,-3.31133,-10 0/0:99:36:36:1333:0:0:0,-10,-10 0/0:97.7508:26:26:981:0:0:0,-7.82678,-10 0/0:79.6958:20:20:728:0:0:0,-6.0206,-10 0/0:99:41:41:1531:0:0:0,-10,-10 0/0:99:28:28:1058:0:0:0,-8.42884,-10 0/0:43.5722:8:8:304:0:0:0,-2.40824,-10 0/0:99:52:52:1951:0:0:0,-10,-10 0/0:99:35:35:1316:0:0:0,-10,-10 0/0:61.634:14:14:514:0:0:0,-4.21442,-10 0/0:99:36:36:1327:0:0:0,-10,-10 0/0:58.6237:13:13:489:0:0:0,-3.91339,-10 0/0:99:48:48:1768:0:0:0,-10,-10 0/0:55.6134:12:12:445:0:0:0,-3.61236,-10 0/0:52.6031:11:11:417:0:0:0,-3.31133,-10 0/0:99:51:51:1870:0:0:0,-10,-10 0/0:70.6649:17:17:626:0:0:0,-5.11751,-10 0/0:73.6752:18:18:664:0:0:0,-5.41854,-10 0/1:0.314963:14:0:0:14:521:-10,-4.21442,0 0/0:46.5825:9:9:332:0:0:0,-2.70927,-10 0/0:61.634:14:14:530:0:0:0,-4.21442,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/0:70.6649:17:17:612:0:0:0,-5.11751,-10 0/1:99:53:29:1055:24:866:-10,0,-10 0/0:99:28:28:1017:0:0:0,-8.42884,-10 0/0:88.7266:23:23:855:0:0:0,-6.92369,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:99:34:34:1269:0:0:0,-10,-10 0/1:6.05622:11:10:370:1:38:-1.53006,0,-10 0/0:99:45:45:1686:0:0:0,-10,-10 0/0:49.5928:10:10:367:0:0:0,-3.0103,-10 0/0:76.6854:19:19:704:0:0:0,-5.71957,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:82.7061:21:21:791:0:0:0,-6.32163,-10 0/0:61.634:14:14:495:0:0:0,-4.21442,-10 0/0:99:33:33:1250:0:0:0,-9.93399,-10 0/0:67.6546:16:16:604:0:0:0,-4.81648,-10 0/0:40.5619:7:7:242:0:0:0,-2.10721,-10 0/0:73.6752:18:18:653:0:0:0,-5.41854,-10 0/0:25.5104:2:2:72:0:0:0,-0.60206,-6.84 0/0:61.634:14:14:521:0:0:0,-4.21442,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:85.7163:22:22:817:0:0:0,-6.62266,-10 0/0:97.7508:26:26:981:0:0:0,-7.82678,-10 0/0:94.7439:25:25:922:0:0:0,-7.52575,-10 0/0:37.5516:6:6:206:0:0:0,-1.80618,-10 0/0:99:27:27:1004:0:0:0,-8.12781,-10 0/0:79.6958:20:20:701:0:0:0,-6.0206,-10 0/0:40.5619:7:7:246:0:0:0,-2.10721,-10 0/0:64.6443:15:15:526:0:0:0,-4.51545,-10 0/0:79.6958:20:20:725:0:0:0,-6.0206,-10 0/0:64.6443:15:15:569:0:0:0,-4.51545,-10 scaffold_86 591710 . G A 439.722 . AB=0.76;ABP=17.6895;AC=2;AF=0.0108696;AN=184;AO=19;CIGAR=1X;DP=1747;DPB=1747;DPRA=0.65331;EPP=8.61041;EPPR=5.02325;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.6999;NS=92;NUMALT=1;ODDS=8.41272;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=673;QR=63377;RO=1726;RPP=28.7251;RPPR=3175.6;RUN=1;SAF=11;SAP=4.03889;SAR=8;SRF=858;SRP=3.13611;SRR=868;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.6097:9:9:274:0:0:0,-2.70927,-10 0/0:60.62:10:10:378:0:0:0,-3.0103,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/0:66.6406:12:12:430:0:0:0,-3.61236,-10 0/1:99:15:6:204:9:320:-10,0,-10 0/0:60.62:10:10:357:0:0:0,-3.0103,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 0/0:48.5788:6:6:208:0:0:0,-1.80618,-10 0/0:57.6097:9:9:327:0:0:0,-2.70927,-10 0/0:48.5788:6:6:223:0:0:0,-1.80618,-10 0/0:45.5685:5:5:183:0:0:0,-1.50515,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:99:36:36:1272:0:0:0,-10,-10 0/0:99:25:25:901:0:0:0,-7.52575,-10 0/0:99:31:31:1126:0:0:0,-9.33193,-10 0/0:99:30:30:1116:0:0:0,-9.0309,-10 0/1:3.59571e-05:10:0:0:10:353:-10,-3.0103,0 0/0:87.7126:19:19:708:0:0:0,-5.71957,-10 0/0:99:30:30:1127:0:0:0,-9.0309,-10 0/0:60.62:10:10:379:0:0:0,-3.0103,-10 0/0:99:27:27:1014:0:0:0,-8.12781,-10 0/0:54.5994:8:8:304:0:0:0,-2.40824,-10 0/0:72.6612:14:14:522:0:0:0,-4.21442,-10 0/0:81.6921:17:17:629:0:0:0,-5.11751,-10 0/0:99:27:27:966:0:0:0,-8.12781,-10 0/0:81.6921:17:17:641:0:0:0,-5.11751,-10 0/0:63.6303:11:11:415:0:0:0,-3.31133,-10 0/0:87.7126:19:19:687:0:0:0,-5.71957,-10 0/0:99:43:43:1578:0:0:0,-10,-10 0/0:36.5376:2:2:72:0:0:0,-0.60206,-6.84 0/0:72.6612:14:14:526:0:0:0,-4.21442,-10 0/0:93.7328:21:21:774:0:0:0,-6.32163,-10 0/0:60.62:10:10:367:0:0:0,-3.0103,-10 0/0:99:23:23:858:0:0:0,-6.92369,-10 0/0:45.5685:5:5:190:0:0:0,-1.50515,-10 0/0:54.5994:8:8:290:0:0:0,-2.40824,-10 0/0:96.7427:22:22:789:0:0:0,-6.62266,-10 0/0:72.6612:14:14:532:0:0:0,-4.21442,-10 0/0:72.6612:14:14:531:0:0:0,-4.21442,-10 0/0:99:36:36:1365:0:0:0,-10,-10 0/0:75.6715:15:15:556:0:0:0,-4.51545,-10 0/0:66.6406:12:12:440:0:0:0,-3.61236,-10 0/0:99:37:37:1378:0:0:0,-10,-10 0/0:99:24:24:878:0:0:0,-7.22472,-10 0/0:63.6303:11:11:414:0:0:0,-3.31133,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:72.6612:14:14:498:0:0:0,-4.21442,-10 0/0:99:57:57:2084:0:0:0,-10,-10 0/0:63.6303:11:11:396:0:0:0,-3.31133,-10 0/0:99:45:45:1631:0:0:0,-10,-10 0/0:66.6406:12:12:430:0:0:0,-3.61236,-10 0/0:57.6097:9:9:338:0:0:0,-2.70927,-10 0/0:99:29:29:1026:0:0:0,-8.72987,-10 0/0:63.6303:11:11:393:0:0:0,-3.31133,-10 0/0:72.6612:14:14:514:0:0:0,-4.21442,-10 0/0:54.5994:8:8:303:0:0:0,-2.40824,-10 0/0:93.7328:21:21:771:0:0:0,-6.32163,-10 0/0:84.7023:18:18:659:0:0:0,-5.41854,-10 0/0:93.7328:21:21:784:0:0:0,-6.32163,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:99:31:31:1163:0:0:0,-9.33193,-10 0/0:75.6715:15:15:563:0:0:0,-4.51545,-10 0/0:63.6303:11:11:392:0:0:0,-3.31133,-10 0/0:99:30:29:1052:0:0:0,-8.72987,-10 0/0:93.7328:21:21:783:0:0:0,-6.32163,-10 0/0:57.6097:9:9:337:0:0:0,-2.70927,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:75.6715:15:15:559:0:0:0,-4.51545,-10 0/0:84.7023:18:18:675:0:0:0,-5.41854,-10 0/0:90.7228:20:20:733:0:0:0,-6.0206,-10 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:72.6612:15:14:509:0:0:0,-4.21442,-10 0/0:99:29:29:984:0:0:0,-8.72987,-10 0/0:63.6303:11:11:412:0:0:0,-3.31133,-10 0/0:63.6303:11:11:412:0:0:0,-3.31133,-10 0/0:66.6406:12:12:427:0:0:0,-3.61236,-10 0/0:45.5685:5:5:187:0:0:0,-1.50515,-10 0/0:63.6303:11:11:394:0:0:0,-3.31133,-10 0/0:99:31:31:1111:0:0:0,-9.33193,-10 0/0:96.7427:22:22:821:0:0:0,-6.62266,-10 0/0:99:25:25:922:0:0:0,-7.52575,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:57.6097:9:9:338:0:0:0,-2.70927,-10 0/0:63.6303:11:11:404:0:0:0,-3.31133,-10 0/0:66.6406:12:12:440:0:0:0,-3.61236,-10 0/0:57.6097:9:9:339:0:0:0,-2.70927,-10 0/0:99:24:24:875:0:0:0,-7.22472,-10 0/0:90.7228:20:20:757:0:0:0,-6.0206,-10 0/0:87.7126:19:19:693:0:0:0,-5.71957,-10 scaffold_86 601360 . G T 1514.45 . AB=0.609375;ABP=9.66043;AC=9;AF=0.048913;AN=184;AO=64;CIGAR=1X;DP=1186;DPB=1186;DPRA=1.04124;EPP=3.55317;EPPR=3.57012;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.7261;NS=92;NUMALT=1;ODDS=0.238505;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2278;QR=39740;RO=1121;RPP=141.985;RPPR=2437.23;RUN=1;SAF=34;SAP=3.55317;SAR=30;SRF=552;SRP=3.57012;SRR=569;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:45.8408:10:8:302:2:71:-5.38791,0,-10 0/0:29.8243:5:5:181:0:0:0,-1.50515,-10 0/0:59.9273:15:15:564:0:0:0,-4.51545,-10 0/0:38.8552:8:8:279:0:0:0,-2.40824,-10 0/0:38.8552:8:8:298:0:0:0,-2.40824,-10 0/0:35.8449:7:7:257:0:0:0,-2.10721,-10 0/0:93.0405:26:26:908:0:0:0,-7.82678,-10 0/0:71.9685:19:19:623:0:0:0,-5.71957,-10 0/0:41.8655:9:9:321:0:0:0,-2.70927,-10 0/0:32.8346:6:6:226:0:0:0,-1.80618,-10 0/0:20.7934:2:2:63:0:0:0,-0.60206,-5.985 0/0:26.814:4:4:152:0:0:0,-1.20412,-10 0/0:68.9582:18:18:648:0:0:0,-5.41854,-10 0/0:80.9993:22:22:818:0:0:0,-6.62266,-10 0/0:77.9891:22:21:687:0:0:0,-6.32163,-10 0/0:47.8861:11:11:389:0:0:0,-3.31133,-10 0/0:59.9273:15:15:561:0:0:0,-4.51545,-10 0/0:41.8655:9:9:338:0:0:0,-2.70927,-10 0/0:65.9479:17:17:633:0:0:0,-5.11751,-10 0/1:99:19:7:223:12:422:-10,0,-10 0/1:99:12:6:179:6:218:-10,0,-10 0/0:68.9582:18:18:629:0:0:0,-5.41854,-10 0/0:32.8346:6:6:203:0:0:0,-1.80618,-10 0/0:68.9582:18:18:678:0:0:0,-5.41854,-10 0/0:59.9273:15:15:525:0:0:0,-4.51545,-10 0/0:65.9479:17:17:634:0:0:0,-5.11751,-10 0/0:44.8758:10:10:375:0:0:0,-3.0103,-10 0/0:56.917:14:14:507:0:0:0,-4.21442,-10 1/1:10.1511:13:0:0:13:492:-10,-3.91339,0 0/0:68.9582:18:18:675:0:0:0,-5.41854,-10 0/1:0.00754698:7:0:0:7:242:-10,-2.10721,0 0/0:47.8861:11:11:401:0:0:0,-3.31133,-10 0/0:47.8861:11:11:398:0:0:0,-3.31133,-10 0/0:35.8449:7:7:240:0:0:0,-2.10721,-10 0/0:74.9788:20:20:717:0:0:0,-6.0206,-10 0/0:23.8037:3:3:100:0:0:0,-0.90309,-9.33333 0/0:44.8758:10:10:274:0:0:0,-3.0103,-10 0/0:56.917:14:14:505:0:0:0,-4.21442,-10 0/0:59.9273:15:15:516:0:0:0,-4.51545,-10 0/0:44.8758:10:10:373:0:0:0,-3.0103,-10 0/1:99:16:4:151:12:415:-10,0,-10 0/0:47.8861:11:11:385:0:0:0,-3.31133,-10 0/0:47.8861:11:11:340:0:0:0,-3.31133,-10 0/0:77.9891:21:21:758:0:0:0,-6.32163,-10 0/0:47.8861:11:11:411:0:0:0,-3.31133,-10 0/0:38.8552:8:8:268:0:0:0,-2.40824,-10 0/0:84.0097:23:23:862:0:0:0,-6.92369,-10 0/0:62.9376:16:16:601:0:0:0,-4.81648,-10 0/0:44.8758:10:10:341:0:0:0,-3.0103,-10 0/0:93.0405:26:26:867:0:0:0,-7.82678,-10 0/0:41.8655:9:9:285:0:0:0,-2.70927,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:50.8964:12:12:443:0:0:0,-3.61236,-10 0/0:32.8346:6:6:228:0:0:0,-1.80618,-10 0/0:87.02:24:24:812:0:0:0,-7.22472,-10 0/0:50.8964:12:12:447:0:0:0,-3.61236,-10 0/0:62.9376:16:16:536:0:0:0,-4.81648,-10 0/0:38.8552:8:8:244:0:0:0,-2.40824,-10 0/0:50.8964:12:12:402:0:0:0,-3.61236,-10 0/0:35.8449:7:7:262:0:0:0,-2.10721,-10 0/0:71.9685:19:19:674:0:0:0,-5.71957,-10 0/0:47.8861:11:11:373:0:0:0,-3.31133,-10 0/0:68.9582:18:18:648:0:0:0,-5.41854,-10 0/0:56.917:14:14:517:0:0:0,-4.21442,-10 0/0:29.8243:5:5:149:0:0:0,-1.50515,-10 0/0:80.9993:22:22:732:0:0:0,-6.62266,-10 0/0:65.9479:17:17:604:0:0:0,-5.11751,-10 0/0:26.814:4:4:148:0:0:0,-1.20412,-10 0/0:96.0508:27:27:953:0:0:0,-8.12781,-10 0/0:29.8243:5:5:187:0:0:0,-1.50515,-10 0/0:68.9582:18:18:648:0:0:0,-5.41854,-10 0/0:46.6907:19:18:643:1:16:0,-2.84082,-10 0/0:44.8758:10:10:353:0:0:0,-3.0103,-10 0/0:44.8758:10:10:377:0:0:0,-3.0103,-10 0/0:59.9273:15:15:530:0:0:0,-4.51545,-10 0/0:35.8449:7:7:229:0:0:0,-2.10721,-10 0/0:56.917:14:14:509:0:0:0,-4.21442,-10 0/0:44.8758:10:10:375:0:0:0,-3.0103,-10 0/0:38.8552:8:8:296:0:0:0,-2.40824,-10 0/0:41.8655:9:9:337:0:0:0,-2.70927,-10 0/0:71.9685:19:19:666:0:0:0,-5.71957,-10 0/0:50.8964:12:12:442:0:0:0,-3.61236,-10 0/0:59.9273:15:15:524:0:0:0,-4.51545,-10 0/0:53.9067:13:13:446:0:0:0,-3.91339,-10 0/0:47.8861:11:11:389:0:0:0,-3.31133,-10 0/0:32.8346:6:6:228:0:0:0,-1.80618,-10 1/1:4.13052:11:0:0:11:402:-10,-3.31133,0 0/0:38.8552:8:8:294:0:0:0,-2.40824,-10 0/0:47.8861:11:11:377:0:0:0,-3.31133,-10 0/0:50.8964:12:12:381:0:0:0,-3.61236,-10 0/0:44.8758:10:10:355:0:0:0,-3.0103,-10 0/0:32.8346:6:6:222:0:0:0,-1.80618,-10 scaffold_86 724762 . A C 1543.66 . AB=0.545455;ABP=3.99733;AC=6;AF=0.0326087;AN=184;AO=60;CIGAR=1X;DP=1420;DPB=1420;DPRA=1.10787;EPP=5.32654;EPPR=3.17044;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9771;NS=92;NUMALT=1;ODDS=3.60616;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2207;QR=49127;RO=1356;RPP=133.299;RPPR=2904.26;RUN=1;SAF=34;SAP=5.32654;SAR=26;SRF=688;SRP=3.65085;SRR=668;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.2877:14:14:523:0:0:0,-4.21442,-10 0/0:37.2362:9:9:337:0:0:0,-2.70927,-10 0/0:46.2671:12:12:432:0:0:0,-3.61236,-10 0/0:43.2568:11:11:391:0:0:0,-3.31133,-10 0/0:34.2259:8:8:302:0:0:0,-2.40824,-10 0/0:31.2156:8:7:252:0:0:0,-2.10721,-10 0/0:99:38:38:1396:0:0:0,-10,-10 0/0:55.298:15:15:538:0:0:0,-4.51545,-10 0/0:46.2671:12:12:396:0:0:0,-3.61236,-10 0/0:16.1641:2:2:64:0:0:0,-0.60206,-6.08 0/0:31.2156:7:7:266:0:0:0,-2.10721,-10 0/0:25.195:5:5:167:0:0:0,-1.50515,-10 0/0:99:32:32:1156:0:0:0,-9.63296,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:79.3804:23:23:850:0:0:0,-6.92369,-10 0/0:49.2774:13:13:445:0:0:0,-3.91339,-10 0/0:49.2774:13:13:482:0:0:0,-3.91339,-10 0/0:46.2671:12:12:447:0:0:0,-3.61236,-10 0/0:49.2774:13:13:467:0:0:0,-3.91339,-10 0/0:99:31:31:1078:0:0:0,-9.33193,-10 0/0:52.2877:14:14:513:0:0:0,-4.21442,-10 0/0:67.3392:19:19:715:0:0:0,-5.71957,-10 0/0:34.2259:8:8:304:0:0:0,-2.40824,-10 0/0:52.2877:15:14:480:0:0:0,-4.21442,-10 0/0:64.3289:18:18:676:0:0:0,-5.41854,-10 0/0:79.3804:23:23:818:0:0:0,-6.92369,-10 0/0:94.4303:28:28:1021:0:0:0,-8.42884,-10 0/0:31.2156:7:7:265:0:0:0,-2.10721,-10 0/0:52.2877:14:14:483:0:0:0,-4.21442,-10 0/0:85.4008:25:25:920:0:0:0,-7.52575,-10 0/0:28.2053:6:6:211:0:0:0,-1.80618,-10 0/0:19.1744:3:3:114:0:0:0,-0.90309,-10 0/0:37.2362:9:9:318:0:0:0,-2.70927,-10 0/0:58.3083:16:16:566:0:0:0,-4.81648,-10 0/0:43.2568:11:11:391:0:0:0,-3.31133,-10 0/0:19.1744:3:3:114:0:0:0,-0.90309,-10 0/0:31.2156:7:7:228:0:0:0,-2.10721,-10 0/0:49.2774:13:13:478:0:0:0,-3.91339,-10 0/0:58.3083:16:16:598:0:0:0,-4.81648,-10 0/0:34.2259:8:8:280:0:0:0,-2.40824,-10 0/0:94.4303:28:28:1006:0:0:0,-8.42884,-10 0/0:43.2568:11:11:358:0:0:0,-3.31133,-10 0/0:46.2671:12:12:439:0:0:0,-3.61236,-10 0/0:97.439:29:29:1014:0:0:0,-8.72987,-10 0/0:61.3186:17:17:594:0:0:0,-5.11751,-10 0/0:49.2774:13:13:447:0:0:0,-3.91339,-10 0/0:99:39:39:1416:0:0:0,-10,-10 0/0:64.3289:18:18:661:0:0:0,-5.41854,-10 0/0:70.3495:20:20:698:0:0:0,-6.0206,-10 0/0:82.3906:24:24:875:0:0:0,-7.22472,-10 0/0:40.2465:10:10:374:0:0:0,-3.0103,-10 0/0:99:32:32:1156:0:0:0,-9.63296,-10 0/0:46.2671:12:12:453:0:0:0,-3.61236,-10 0/0:16.1641:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:34:34:1220:0:0:0,-10,-10 0/0:37.2362:9:9:341:0:0:0,-2.70927,-10 0/0:76.3701:22:22:781:0:0:0,-6.62266,-10 0/0:28.2053:6:6:218:0:0:0,-1.80618,-10 0/0:49.2774:13:13:485:0:0:0,-3.91339,-10 0/0:40.2465:10:10:352:0:0:0,-3.0103,-10 0/0:64.3289:18:18:675:0:0:0,-5.41854,-10 0/0:64.3289:18:18:657:0:0:0,-5.41854,-10 0/0:88.4109:27:26:985:0:0:0,-7.82678,-10 0/0:46.2671:12:12:381:0:0:0,-3.61236,-10 0/0:25.195:5:5:177:0:0:0,-1.50515,-10 0/1:99:29:16:595:13:489:-10,0,-10 0/0:82.3906:24:24:906:0:0:0,-7.22472,-10 0/0:28.2053:6:6:192:0:0:0,-1.80618,-10 0/0:97.439:29:29:1052:0:0:0,-8.72987,-10 0/0:37.2362:9:9:328:0:0:0,-2.70927,-10 0/0:55.298:15:15:570:0:0:0,-4.51545,-10 0/0:94.4303:28:28:1026:0:0:0,-8.42884,-10 0/0:55.298:15:15:559:0:0:0,-4.51545,-10 0/0:49.2774:13:13:483:0:0:0,-3.91339,-10 0/0:52.2877:14:14:528:0:0:0,-4.21442,-10 0/0:55.298:15:15:536:0:0:0,-4.51545,-10 0/0:46.2671:12:12:450:0:0:0,-3.61236,-10 0/1:0.0204667:7:0:0:7:251:-10,-2.10721,0 0/1:0.00127634:3:0:0:3:114:-10,-0.90309,0 0/0:61.3186:17:17:605:0:0:0,-5.11751,-10 1/1:48.2384:30:0:0:30:1094:-10,-9.0309,0 0/0:73.3598:21:21:756:0:0:0,-6.32163,-10 0/1:99:16:9:340:7:259:-10,0,-10 0/0:58.3083:16:16:561:0:0:0,-4.81648,-10 0/0:34.2259:8:8:273:0:0:0,-2.40824,-10 0/0:19.1744:3:3:112:0:0:0,-0.90309,-10 0/0:40.2465:10:10:364:0:0:0,-3.0103,-10 0/0:49.2774:13:13:479:0:0:0,-3.91339,-10 0/0:25.195:5:5:185:0:0:0,-1.50515,-10 0/0:49.2774:13:13:473:0:0:0,-3.91339,-10 0/0:61.3186:18:17:635:0:0:0,-5.11751,-10 0/0:52.2877:14:14:521:0:0:0,-4.21442,-10 scaffold_86 831658 . G A 13281.8 . AB=0.535398;ABP=5.47002;AC=59;AF=0.320652;AN=184;AO=475;CIGAR=1X;DP=1422;DPB=1422;DPRA=1.10345;EPP=3.56345;EPPR=3.01259;GTI=4;LEN=1;MEANALT=1;MQM=59.9853;MQMR=59.9768;NS=92;NUMALT=1;ODDS=0.199467;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17351;QR=33846;RO=947;RPP=1025.79;RPPR=2050.72;RUN=1;SAF=242;SAP=3.38059;SAR=233;SRF=475;SRP=3.03094;SRR=472;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.4671:16:16:569:0:0:0,-4.81648,-10 0/0:19.3744:7:7:230:0:0:0,-2.10721,-10 0/0:34.4259:12:12:447:0:0:0,-3.61236,-10 0/0:28.4053:10:10:351:0:0:0,-3.0103,-10 0/0:31.4156:11:11:410:0:0:0,-3.31133,-10 0/0:31.4156:11:11:392:0:0:0,-3.31133,-10 0/0:79.5803:27:27:983:0:0:0,-8.12781,-10 0/0:34.4259:12:12:450:0:0:0,-3.61236,-10 0/0:25.395:9:9:317:0:0:0,-2.70927,-10 0/0:13.3538:5:5:190:0:0:0,-1.50515,-10 0/0:25.395:9:9:317:0:0:0,-2.70927,-10 0/0:16.3641:6:6:195:0:0:0,-1.80618,-10 0/0:79.5803:27:27:962:0:0:0,-8.12781,-10 0/0:88.6109:30:30:1101:0:0:0,-9.0309,-10 0/0:43.4568:15:15:558:0:0:0,-4.51545,-10 0/0:52.4877:18:18:653:0:0:0,-5.41854,-10 0/0:40.4465:14:14:521:0:0:0,-4.21442,-10 0/0:10.3435:4:4:148:0:0:0,-1.20412,-10 0/1:99:15:4:143:11:415:-10,0,-10 1/1:78.326:30:0:0:30:1080:-10,-9.0309,0 0/1:99:21:9:320:12:429:-10,0,-10 0/1:99:24:13:489:11:386:-10,0,-10 1/1:12.0994:8:0:0:8:300:-10,-2.40824,0 1/1:21.1303:11:0:0:11:415:-10,-3.31133,0 0/0:34.4259:12:12:422:0:0:0,-3.61236,-10 1/1:51.2333:21:0:0:21:763:-10,-6.32163,0 1/1:39.1921:17:0:0:17:636:-10,-5.11751,0 0/0:34.4259:12:12:441:0:0:0,-3.61236,-10 1/1:21.1303:11:0:0:11:370:-10,-3.31133,0 0/1:99:31:15:567:16:574:-10,0,-10 0/1:0.0320038:3:0:0:3:103:-9.61333,-0.90309,0 1/1:9.08911:7:0:0:7:244:-10,-2.10721,0 1/1:18.12:10:0:0:10:340:-10,-3.0103,0 1/1:15.1097:9:0:0:9:336:-10,-2.70927,0 0/0:40.4465:14:14:486:0:0:0,-4.21442,-10 1/1:9.08911:7:0:0:7:256:-10,-2.10721,0 1/1:27.1509:13:0:0:13:491:-10,-3.91339,0 0/1:99:26:11:365:15:567:-10,0,-10 0/0:28.4053:10:10:378:0:0:0,-3.0103,-10 0/1:55.3751:5:1:36:4:150:-10,0,-2.79382 1/1:72.3054:28:0:0:28:1024:-10,-8.42884,0 0/0:34.4259:12:12:453:0:0:0,-3.61236,-10 0/0:37.4362:13:13:431:0:0:0,-3.91339,-10 0/1:99:37:19:699:18:647:-10,0,-10 1/1:42.2024:18:0:0:18:647:-10,-5.41854,0 1/1:27.1509:13:0:0:13:491:-10,-3.91339,0 1/1:66.2848:26:0:0:26:924:-10,-7.82678,0 1/1:45.2127:19:0:0:19:718:-10,-5.71957,0 1/1:12.0994:8:0:0:8:303:-10,-2.40824,0 0/1:99:35:21:758:14:526:-10,0,-10 1/1:15.1097:9:0:0:9:334:-10,-2.70927,0 0/1:99:22:12:408:10:347:-10,0,-10 1/1:12.0994:8:0:0:8:284:-10,-2.40824,0 0/1:0.0159724:2:0:0:2:76:-7.22,-0.60206,0 1/1:84.3465:32:0:0:32:1148:-10,-9.63296,0 1/1:39.1921:17:0:0:17:638:-10,-5.11751,0 1/1:36.1818:16:0:0:16:591:-10,-4.81648,0 0/0:25.395:9:9:292:0:0:0,-2.70927,-10 0/0:58.5083:20:20:699:0:0:0,-6.0206,-10 0/0:16.3641:6:6:216:0:0:0,-1.80618,-10 0/0:82.5906:28:28:1021:0:0:0,-8.42884,-10 0/0:55.498:19:19:705:0:0:0,-5.71957,-10 0/0:58.5083:20:20:653:0:0:0,-6.0206,-10 0/0:37.4362:13:13:479:0:0:0,-3.91339,-10 0/0:19.3744:7:7:261:0:0:0,-2.10721,-10 0/0:70.5495:24:24:862:0:0:0,-7.22472,-10 0/0:52.4877:18:18:625:0:0:0,-5.41854,-10 0/0:22.3847:8:8:277:0:0:0,-2.40824,-10 0/0:99:34:34:1175:0:0:0,-10,-10 0/0:34.4259:12:12:451:0:0:0,-3.61236,-10 0/0:31.4156:11:11:416:0:0:0,-3.31133,-10 0/0:73.5598:25:25:897:0:0:0,-7.52575,-10 0/0:97.6389:33:33:1143:0:0:0,-9.93399,-10 0/0:49.4774:17:17:589:0:0:0,-5.11751,-10 0/0:97.6389:33:33:1226:0:0:0,-9.93399,-10 0/0:37.4362:13:13:434:0:0:0,-3.91339,-10 0/0:25.395:9:9:319:0:0:0,-2.70927,-10 0/0:31.4156:11:11:400:0:0:0,-3.31133,-10 0/0:22.3847:8:8:280:0:0:0,-2.40824,-10 0/0:22.3847:8:8:300:0:0:0,-2.40824,-10 0/0:82.5906:28:28:935:0:0:0,-8.42884,-10 0/0:46.4671:16:16:518:0:0:0,-4.81648,-10 0/0:61.5186:21:21:780:0:0:0,-6.32163,-10 0/0:34.4259:12:12:414:0:0:0,-3.61236,-10 0/0:58.5083:20:20:730:0:0:0,-6.0206,-10 0/1:0.0927013:1:1:36:0:0:0,-0.30103,-3.6 1/1:36.1818:16:0:0:16:608:-10,-4.81648,0 0/1:0.129455:5:0:0:5:190:-10,-1.50515,0 0/0:31.4156:11:11:402:0:0:0,-3.31133,-10 0/0:19.3744:7:7:259:0:0:0,-2.10721,-10 0/0:31.4156:11:11:412:0:0:0,-3.31133,-10 0/0:37.4362:13:13:450:0:0:0,-3.91339,-10 scaffold_86 1303181 . C CA,CAA 11550.7 . AB=0.444915,0.416667;ABP=9.23028,4.45795;AC=15,1;AF=0.0815217,0.00543478;AN=184,184;AO=138,10;CIGAR=1M1I8M,1M2I8M;DP=1808,1808;DPB=1825,1825;DPRA=0.997794,1.24605;EPP=3.26206,3.0103;EPPR=5.40389,5.40389;GTI=9,9;LEN=1,2;MEANALT=1.78571,2;MQM=59.6594,60;MQMR=59.9649,59.9649;NS=92,92;NUMALT=3,3;ODDS=0.412685,0.412685;PAIRED=0,0;PAIREDR=0,0;PAO=0,0;PQA=0,0;PQR=0,0;PRO=0,0;QA=4868,318;QR=47522,47522;RO=1310,1310;RPP=285.553,24.725;RPPR=2795.76,2795.76;RUN=1,1;SAF=65,5;SAP=4.01736,3.0103;SAR=73,5;SRF=668,668;SRP=4.13085,4.13085;SRR=642,642;TYPE=ins,ins GT:GQ:DP:RO:QR:AO:QA:GL 0|1:-0:16:0:0:0,14,0:0,477,0:-10,-10,-10,-4.21442,-4.21442,0,-10,-10,-4.21442,-10 0|0:12.9825:13:0:0:12,0,0:445,0,0:-10,-3.61236,0,-10,-3.61236,-10,-10,-3.61236,-10,-10 0|1:99:20:0:0:12,8,0:435,301,0:-10,-10,-10,-10,0,-10,-10,-10,-10,-10 0|0:22.0134:15:0:0:15,0,0:558,0,0:-10,-4.51545,0,-10,-4.51545,-10,-10,-4.51545,-10,-10 0|0:0.298404:9:2:76:0,0,0:0,0,0:0,-0.60206,-6.84762,-0.60206,-6.84762,-6.84762,-0.60206,-6.84762,-6.84762,-6.84762 0|0:38.5267:12:12:432:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 0|0:99:39:39:1428:0,0,0:0,0,0:0,-10,-10,-10,-10,-10,-10,-10,-10,-10 0|1:99:22:1:37:13,8,0:480,280,0:-10,-10,-10,-10,0,-10,-10,-10,-10,-10 0|0:41.537:14:13:475:0,0,0:0,0,0:0,-3.91339,-10,-3.91339,-10,-10,-3.91339,-10,-10,-10 0|0:17.4546:5:5:187:0,0,0:0,0,0:0,-1.50515,-10,-1.50515,-10,-10,-1.50515,-10,-10,-10 0|0:38.5267:12:12:431:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 0|1:9.45063e-05:5:0:0:0,5,0:0,190,0:-10,-10,-10,-1.50515,-1.50515,0,-10,-10,-1.50515,-10 0|1:99:32:0:0:16,16,0:608,565,0:-10,-10,-10,-10,0,-10,-10,-10,-10,-10 0|1:99:46:30:1093:0,16,0:0,561,0:-10,-10,-10,0,-10,-10,-10,-10,-10,-10 0|0:80.671:27:26:948:0,0,0:0,0,0:0,-7.82678,-10,-7.82678,-10,-10,-7.82678,-10,-10,-10 0|0:99:33:11:394:21,0,0:769,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:53.5782:17:17:604:0,0,0:0,0,0:0,-5.11751,-10,-5.11751,-10,-10,-5.11751,-10,-10,-10 0|1:0.000189015:6:0:0:0,6,0:0,228,0:-10,-10,-10,-1.80618,-1.80618,0,-10,-10,-1.80618,-10 0|0:68.6297:23:22:806:0,0,0:0,0,0:0,-6.62266,-10,-6.62266,-10,-10,-6.62266,-10,-10,-10 0|0:95.72:31:31:1116:0,0,0:0,0,0:0,-9.33193,-10,-9.33193,-10,-10,-9.33193,-10,-10,-10 0|1:99:21:11:396:0,9,0:0,335,0:-10,-10,-10,0,-10,-10,-10,-10,-10,-10 0|0:77.6606:25:25:921:0,0,0:0,0,0:0,-7.52575,-10,-7.52575,-10,-10,-7.52575,-10,-10,-10 0|0:32.5061:10:10:374:0,0,0:0,0,0:0,-3.0103,-10,-3.0103,-10,-10,-3.0103,-10,-10,-10 0|0:74.6503:24:24:877:0,0,0:0,0,0:0,-7.22472,-10,-7.22472,-10,-10,-7.22472,-10,-10,-10 0|0:49.1061:24:0:0:24,0,0:903,0,0:-10,-7.22472,0,-10,-7.22472,-10,-10,-7.22472,-10,-10 0|0:59.5988:19:19:687:0,0,0:0,0,0:0,-5.71957,-10,-5.71957,-10,-10,-5.71957,-10,-10,-10 0|0:47.5576:15:15:547:0,0,0:0,0,0:0,-4.51545,-10,-4.51545,-10,-10,-4.51545,-10,-10,-10 0|0:0.352379:11:0:0:11,0,0:394,0,0:-10,-3.31133,0,-10,-3.31133,-10,-10,-3.31133,-10,-10 0|0:47.5576:15:15:542:0,0,0:0,0,0:0,-4.51545,-10,-4.51545,-10,-10,-4.51545,-10,-10,-10 0|0:99:29:14:488:15,0,0:551,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:32.5061:10:10:366:0,0,0:0,0,0:0,-3.0103,-10,-3.0103,-10,-10,-3.0103,-10,-10,-10 0|0:11.434:3:3:109:0,0,0:0,0,0:0,-0.90309,-10,-0.90309,-10,-10,-0.90309,-10,-10,-10 0|0:56.5885:19:18:665:0,0,0:0,0,0:0,-5.41854,-10,-5.41854,-10,-10,-5.41854,-10,-10,-10 0|0:50.5679:16:16:551:0,0,0:0,0,0:0,-4.81648,-10,-4.81648,-10,-10,-4.81648,-10,-10,-10 0|0:50.5679:16:16:574:0,0,0:0,0,0:0,-4.81648,-10,-4.81648,-10,-10,-4.81648,-10,-10,-10 0|0:14.4443:4:4:149:0,0,0:0,0,0:0,-1.20412,-10,-1.20412,-10,-10,-1.20412,-10,-10,-10 0|0:38.5267:12:12:427:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 0|0:77.6606:25:25:932:0,0,0:0,0,0:0,-7.52575,-10,-7.52575,-10,-10,-7.52575,-10,-10,-10 0|0:35.5164:12:11:403:0,0,0:0,0,0:0,-3.31133,-10,-3.31133,-10,-10,-3.31133,-10,-10,-10 0|0:53.5782:17:17:621:0,0,0:0,0,0:0,-5.11751,-10,-5.11751,-10,-10,-5.11751,-10,-10,-10 0|0:65.6194:23:21:764:0,0,0:0,0,0:0,-6.32163,-10,-6.32163,-10,-10,-6.32163,-10,-10,-10 0|0:62.6091:21:20:703:0,0,0:0,0,0:0,-6.0206,-10,-6.0206,-10,-10,-6.0206,-10,-10,-10 0|0:56.5885:20:18:617:0,0,0:0,0,0:0,-5.41854,-10,-5.41854,-10,-10,-5.41854,-10,-10,-10 0|0:95.72:31:31:1120:0,0,0:0,0,0:0,-9.33193,-10,-9.33193,-10,-10,-9.33193,-10,-10,-10 0|0:86.6912:28:28:1044:0,0,0:0,0,0:0,-8.42884,-10,-8.42884,-10,-10,-8.42884,-10,-10,-10 0|0:32.5061:10:10:360:0,0,0:0,0,0:0,-3.0103,-10,-3.0103,-10,-10,-3.0103,-10,-10,-10 0|0:99:40:39:1412:0,0,0:0,0,0:0,-10,-10,-10,-10,-10,-10,-10,-10,-10 0|0:65.6194:21:21:786:0,0,0:0,0,0:0,-6.32163,-10,-6.32163,-10,-10,-6.32163,-10,-10,-10 0|0:62.6091:20:20:734:0,0,0:0,0,0:0,-6.0206,-10,-6.0206,-10,-10,-6.0206,-10,-10,-10 0|0:99:29:17:624:11,0,0:387,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:50.5679:16:16:582:0,0,0:0,0,0:0,-4.81648,-10,-4.81648,-10,-10,-4.81648,-10,-10,-10 0|0:99:37:18:669:19,0,0:708,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:47.5576:15:15:543:0,0,0:0,0,0:0,-4.51545,-10,-4.51545,-10,-10,-4.51545,-10,-10,-10 0|0:17.4546:5:5:181:0,0,0:0,0,0:0,-1.50515,-10,-1.50515,-10,-10,-1.50515,-10,-10,-10 0|0:99:37:36:1300:0,0,0:0,0,0:0,-10,-10,-10,-10,-10,-10,-10,-10,-10 0|0:35.5164:12:11:402:0,0,0:0,0,0:0,-3.31133,-10,-3.31133,-10,-10,-3.31133,-10,-10,-10 0|0:80.671:26:26:931:0,0,0:0,0,0:0,-7.82678,-10,-7.82678,-10,-10,-7.82678,-10,-10,-10 0|0:38.5267:12:12:441:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 0|0:68.6297:23:22:792:0,0,0:0,0,0:0,-6.62266,-10,-6.62266,-10,-10,-6.62266,-10,-10,-10 1|1:16.4316:16:0:0:0,16,0:0,579,0:-10,-10,-10,-4.81648,-4.81648,0,-10,-10,-4.81648,-10 0|0:52.1164:25:0:0:25,0,0:891,0,0:-10,-7.52575,0,-10,-7.52575,-10,-10,-7.52575,-10,-10 0|0:47.5576:15:15:557:0,0,0:0,0,0:0,-4.51545,-10,-4.51545,-10,-10,-4.51545,-10,-10,-10 0|2:58.4078:24:13:465:0,1,10:0,38,318:-10,-10,-10,-10,-10,-10,0,-10,-10,-10 0|0:55.1267:26:0:0:26,0,0:988,0,0:-10,-7.82678,0,-10,-7.82678,-10,-10,-7.82678,-10,-10 0|0:38.5267:12:12:422:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 0|0:33.0056:30:1:22:29,0,0:1052,0,0:-10,-5.35378,0,-10,-8.72987,-10,-10,-8.72987,-10,-10 0|0:71.64:24:23:831:0,0,0:0,0,0:0,-6.92369,-10,-6.92369,-10,-10,-6.92369,-10,-10,-10 0|0:0.172617:10:0:0:10,0,0:379,0,0:-10,-3.0103,0,-10,-3.0103,-10,-10,-3.0103,-10,-10 0|0:99:43:42:1497:0,0,0:0,0,0:0,-10,-10,-10,-10,-10,-10,-10,-10,-10 0|0:35.5164:12:11:415:0,0,0:0,0,0:0,-3.31133,-10,-3.31133,-10,-10,-3.31133,-10,-10,-10 0|0:50.5679:17:16:567:0,0,0:0,0,0:0,-4.81648,-10,-4.81648,-10,-10,-4.81648,-10,-10,-10 0|0:89.7012:29:29:1032:0,0,0:0,0,0:0,-8.72987,-10,-8.72987,-10,-10,-8.72987,-10,-10,-10 0|0:65.6194:22:21:757:0,0,0:0,0,0:0,-6.32163,-10,-6.32163,-10,-10,-6.32163,-10,-10,-10 0|0:35.5164:11:11:401:0,0,0:0,0,0:0,-3.31133,-10,-3.31133,-10,-10,-3.31133,-10,-10,-10 0|0:99:37:36:1303:0,0,0:0,0,0:0,-10,-10,-10,-10,-10,-10,-10,-10,-10 0|0:41.537:13:13:480:0,0,0:0,0,0:0,-3.91339,-10,-3.91339,-10,-10,-3.91339,-10,-10,-10 0|0:38.5267:12:12:449:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 1|1:19.4419:18:0:0:0,17,0:0,575,0:-10,-10,-10,-5.11751,-5.11751,0,-10,-10,-5.11751,-10 0|0:0.685366:3:2:74:0,0,0:0,0,0:0,-0.60206,-6.65333,-0.60206,-6.65333,-6.65333,-0.60206,-6.65333,-6.65333,-6.65333 0|0:0.0212056:8:0:0:7,0,0:266,0,0:-10,-2.10721,0,-10,-2.10721,-10,-10,-2.10721,-10,-10 0|0:89.7012:29:29:1047:0,0,0:0,0,0:0,-8.72987,-10,-8.72987,-10,-10,-8.72987,-10,-10,-10 0|0:99:44:18:646:26,0,0:892,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|1:1.99507e-14:18:1:36:0,11,0:0,368,0:-10,-10,-10,0,-4.02172,-0.710393,-10,-10,-4.02172,-10 0|1:99:20:12:433:0,8,0:0,267,0:-10,-10,-10,0,-10,-10,-10,-10,-10,-10 0|0:74.6503:25:24:880:0,0,0:0,0,0:0,-7.22472,-10,-7.22472,-10,-10,-7.22472,-10,-10,-10 0|0:26.4855:8:8:297:0,0,0:0,0,0:0,-2.40824,-10,-2.40824,-10,-10,-2.40824,-10,-10,-10 0|0:53.5782:17:17:619:0,0,0:0,0,0:0,-5.11751,-10,-5.11751,-10,-10,-5.11751,-10,-10,-10 0|0:41.537:13:13:483:0,0,0:0,0,0:0,-3.91339,-10,-3.91339,-10,-10,-3.91339,-10,-10,-10 0|1:13.6984:6:1:33:2,3,0:76,104,0:-10,-6.32749,-8.86735,-4.01691,0,-6.36818,-10,-9.46941,-7.27127,-10 0|0:56.5885:18:18:653:0,0,0:0,0,0:0,-5.41854,-10,-5.41854,-10,-10,-5.41854,-10,-10,-10 0|0:99:30:17:628:12,0,0:453,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:71.64:23:23:834:0,0,0:0,0,0:0,-6.92369,-10,-6.92369,-10,-10,-6.92369,-10,-10,-10 scaffold_86 1303186 . A T 11550.7 . AB=0.562701;ABP=13.6303;AC=27;AF=0.146739;AN=184;AO=306;CIGAR=5M1X3M;DP=1808;DPB=1825;DPRA=1.23095;EPP=3.12384;EPPR=5.40389;GTI=9;LEN=1;MEANALT=1.47368;MQM=59.9542;MQMR=59.9649;NS=92;NUMALT=3;ODDS=0.412685;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11235;QR=47522;RO=1310;RPP=667.481;RPPR=2795.76;RUN=1;SAF=155;SAP=3.12384;SAR=151;SRF=668;SRP=4.13085;SRR=642;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:-0:16:0:0:0,14,0:0,477,0:-10,-10,-10,-4.21442,-4.21442,0,-10,-10,-4.21442,-10 1|1:12.9825:13:0:0:12,0,0:445,0,0:-10,-3.61236,0,-10,-3.61236,-10,-10,-3.61236,-10,-10 1|0:99:20:0:0:12,8,0:435,301,0:-10,-10,-10,-10,0,-10,-10,-10,-10,-10 1|1:22.0134:15:0:0:15,0,0:558,0,0:-10,-4.51545,0,-10,-4.51545,-10,-10,-4.51545,-10,-10 0|1:0.298404:9:2:76:0,0,0:0,0,0:0,-0.60206,-6.84762,-0.60206,-6.84762,-6.84762,-0.60206,-6.84762,-6.84762,-6.84762 0|0:38.5267:12:12:432:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 0|0:99:39:39:1428:0,0,0:0,0,0:0,-10,-10,-10,-10,-10,-10,-10,-10,-10 1|0:99:22:1:37:13,8,0:480,280,0:-10,-10,-10,-10,0,-10,-10,-10,-10,-10 0|0:41.537:14:13:475:0,0,0:0,0,0:0,-3.91339,-10,-3.91339,-10,-10,-3.91339,-10,-10,-10 0|0:17.4546:5:5:187:0,0,0:0,0,0:0,-1.50515,-10,-1.50515,-10,-10,-1.50515,-10,-10,-10 0|0:38.5267:12:12:431:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 0|0:9.45063e-05:5:0:0:0,5,0:0,190,0:-10,-10,-10,-1.50515,-1.50515,0,-10,-10,-1.50515,-10 1|0:99:32:0:0:16,16,0:608,565,0:-10,-10,-10,-10,0,-10,-10,-10,-10,-10 0|0:99:46:30:1093:0,16,0:0,561,0:-10,-10,-10,0,-10,-10,-10,-10,-10,-10 0|0:80.671:27:26:948:0,0,0:0,0,0:0,-7.82678,-10,-7.82678,-10,-10,-7.82678,-10,-10,-10 0|1:99:33:11:394:21,0,0:769,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:53.5782:17:17:604:0,0,0:0,0,0:0,-5.11751,-10,-5.11751,-10,-10,-5.11751,-10,-10,-10 0|0:0.000189015:6:0:0:0,6,0:0,228,0:-10,-10,-10,-1.80618,-1.80618,0,-10,-10,-1.80618,-10 0|0:68.6297:23:22:806:0,0,0:0,0,0:0,-6.62266,-10,-6.62266,-10,-10,-6.62266,-10,-10,-10 0|0:95.72:31:31:1116:0,0,0:0,0,0:0,-9.33193,-10,-9.33193,-10,-10,-9.33193,-10,-10,-10 0|0:99:21:11:396:0,9,0:0,335,0:-10,-10,-10,0,-10,-10,-10,-10,-10,-10 0|0:77.6606:25:25:921:0,0,0:0,0,0:0,-7.52575,-10,-7.52575,-10,-10,-7.52575,-10,-10,-10 0|0:32.5061:10:10:374:0,0,0:0,0,0:0,-3.0103,-10,-3.0103,-10,-10,-3.0103,-10,-10,-10 0|0:74.6503:24:24:877:0,0,0:0,0,0:0,-7.22472,-10,-7.22472,-10,-10,-7.22472,-10,-10,-10 1|1:49.1061:24:0:0:24,0,0:903,0,0:-10,-7.22472,0,-10,-7.22472,-10,-10,-7.22472,-10,-10 0|0:59.5988:19:19:687:0,0,0:0,0,0:0,-5.71957,-10,-5.71957,-10,-10,-5.71957,-10,-10,-10 0|0:47.5576:15:15:547:0,0,0:0,0,0:0,-4.51545,-10,-4.51545,-10,-10,-4.51545,-10,-10,-10 0|1:0.352379:11:0:0:11,0,0:394,0,0:-10,-3.31133,0,-10,-3.31133,-10,-10,-3.31133,-10,-10 0|0:47.5576:15:15:542:0,0,0:0,0,0:0,-4.51545,-10,-4.51545,-10,-10,-4.51545,-10,-10,-10 0|1:99:29:14:488:15,0,0:551,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:32.5061:10:10:366:0,0,0:0,0,0:0,-3.0103,-10,-3.0103,-10,-10,-3.0103,-10,-10,-10 0|0:11.434:3:3:109:0,0,0:0,0,0:0,-0.90309,-10,-0.90309,-10,-10,-0.90309,-10,-10,-10 0|0:56.5885:19:18:665:0,0,0:0,0,0:0,-5.41854,-10,-5.41854,-10,-10,-5.41854,-10,-10,-10 0|0:50.5679:16:16:551:0,0,0:0,0,0:0,-4.81648,-10,-4.81648,-10,-10,-4.81648,-10,-10,-10 0|0:50.5679:16:16:574:0,0,0:0,0,0:0,-4.81648,-10,-4.81648,-10,-10,-4.81648,-10,-10,-10 0|0:14.4443:4:4:149:0,0,0:0,0,0:0,-1.20412,-10,-1.20412,-10,-10,-1.20412,-10,-10,-10 0|0:38.5267:12:12:427:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 0|0:77.6606:25:25:932:0,0,0:0,0,0:0,-7.52575,-10,-7.52575,-10,-10,-7.52575,-10,-10,-10 0|0:35.5164:12:11:403:0,0,0:0,0,0:0,-3.31133,-10,-3.31133,-10,-10,-3.31133,-10,-10,-10 0|0:53.5782:17:17:621:0,0,0:0,0,0:0,-5.11751,-10,-5.11751,-10,-10,-5.11751,-10,-10,-10 0|0:65.6194:23:21:764:0,0,0:0,0,0:0,-6.32163,-10,-6.32163,-10,-10,-6.32163,-10,-10,-10 0|0:62.6091:21:20:703:0,0,0:0,0,0:0,-6.0206,-10,-6.0206,-10,-10,-6.0206,-10,-10,-10 0|0:56.5885:20:18:617:0,0,0:0,0,0:0,-5.41854,-10,-5.41854,-10,-10,-5.41854,-10,-10,-10 0|0:95.72:31:31:1120:0,0,0:0,0,0:0,-9.33193,-10,-9.33193,-10,-10,-9.33193,-10,-10,-10 0|0:86.6912:28:28:1044:0,0,0:0,0,0:0,-8.42884,-10,-8.42884,-10,-10,-8.42884,-10,-10,-10 0|0:32.5061:10:10:360:0,0,0:0,0,0:0,-3.0103,-10,-3.0103,-10,-10,-3.0103,-10,-10,-10 0|0:99:40:39:1412:0,0,0:0,0,0:0,-10,-10,-10,-10,-10,-10,-10,-10,-10 0|0:65.6194:21:21:786:0,0,0:0,0,0:0,-6.32163,-10,-6.32163,-10,-10,-6.32163,-10,-10,-10 0|0:62.6091:20:20:734:0,0,0:0,0,0:0,-6.0206,-10,-6.0206,-10,-10,-6.0206,-10,-10,-10 0|1:99:29:17:624:11,0,0:387,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:50.5679:16:16:582:0,0,0:0,0,0:0,-4.81648,-10,-4.81648,-10,-10,-4.81648,-10,-10,-10 0|1:99:37:18:669:19,0,0:708,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:47.5576:15:15:543:0,0,0:0,0,0:0,-4.51545,-10,-4.51545,-10,-10,-4.51545,-10,-10,-10 0|0:17.4546:5:5:181:0,0,0:0,0,0:0,-1.50515,-10,-1.50515,-10,-10,-1.50515,-10,-10,-10 0|0:99:37:36:1300:0,0,0:0,0,0:0,-10,-10,-10,-10,-10,-10,-10,-10,-10 0|0:35.5164:12:11:402:0,0,0:0,0,0:0,-3.31133,-10,-3.31133,-10,-10,-3.31133,-10,-10,-10 0|0:80.671:26:26:931:0,0,0:0,0,0:0,-7.82678,-10,-7.82678,-10,-10,-7.82678,-10,-10,-10 0|0:38.5267:12:12:441:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 0|0:68.6297:23:22:792:0,0,0:0,0,0:0,-6.62266,-10,-6.62266,-10,-10,-6.62266,-10,-10,-10 0|0:16.4316:16:0:0:0,16,0:0,579,0:-10,-10,-10,-4.81648,-4.81648,0,-10,-10,-4.81648,-10 1|1:52.1164:25:0:0:25,0,0:891,0,0:-10,-7.52575,0,-10,-7.52575,-10,-10,-7.52575,-10,-10 0|0:47.5576:15:15:557:0,0,0:0,0,0:0,-4.51545,-10,-4.51545,-10,-10,-4.51545,-10,-10,-10 0|0:58.4078:24:13:465:0,1,10:0,38,318:-10,-10,-10,-10,-10,-10,0,-10,-10,-10 1|1:55.1267:26:0:0:26,0,0:988,0,0:-10,-7.82678,0,-10,-7.82678,-10,-10,-7.82678,-10,-10 0|0:38.5267:12:12:422:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 1|1:33.0056:30:1:22:29,0,0:1052,0,0:-10,-5.35378,0,-10,-8.72987,-10,-10,-8.72987,-10,-10 0|0:71.64:24:23:831:0,0,0:0,0,0:0,-6.92369,-10,-6.92369,-10,-10,-6.92369,-10,-10,-10 0|1:0.172617:10:0:0:10,0,0:379,0,0:-10,-3.0103,0,-10,-3.0103,-10,-10,-3.0103,-10,-10 0|0:99:43:42:1497:0,0,0:0,0,0:0,-10,-10,-10,-10,-10,-10,-10,-10,-10 0|0:35.5164:12:11:415:0,0,0:0,0,0:0,-3.31133,-10,-3.31133,-10,-10,-3.31133,-10,-10,-10 0|0:50.5679:17:16:567:0,0,0:0,0,0:0,-4.81648,-10,-4.81648,-10,-10,-4.81648,-10,-10,-10 0|0:89.7012:29:29:1032:0,0,0:0,0,0:0,-8.72987,-10,-8.72987,-10,-10,-8.72987,-10,-10,-10 0|0:65.6194:22:21:757:0,0,0:0,0,0:0,-6.32163,-10,-6.32163,-10,-10,-6.32163,-10,-10,-10 0|0:35.5164:11:11:401:0,0,0:0,0,0:0,-3.31133,-10,-3.31133,-10,-10,-3.31133,-10,-10,-10 0|0:99:37:36:1303:0,0,0:0,0,0:0,-10,-10,-10,-10,-10,-10,-10,-10,-10 0|0:41.537:13:13:480:0,0,0:0,0,0:0,-3.91339,-10,-3.91339,-10,-10,-3.91339,-10,-10,-10 0|0:38.5267:12:12:449:0,0,0:0,0,0:0,-3.61236,-10,-3.61236,-10,-10,-3.61236,-10,-10,-10 0|0:19.4419:18:0:0:0,17,0:0,575,0:-10,-10,-10,-5.11751,-5.11751,0,-10,-10,-5.11751,-10 0|1:0.685366:3:2:74:0,0,0:0,0,0:0,-0.60206,-6.65333,-0.60206,-6.65333,-6.65333,-0.60206,-6.65333,-6.65333,-6.65333 0|1:0.0212056:8:0:0:7,0,0:266,0,0:-10,-2.10721,0,-10,-2.10721,-10,-10,-2.10721,-10,-10 0|0:89.7012:29:29:1047:0,0,0:0,0,0:0,-8.72987,-10,-8.72987,-10,-10,-8.72987,-10,-10,-10 0|1:99:44:18:646:26,0,0:892,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:1.99507e-14:18:1:36:0,11,0:0,368,0:-10,-10,-10,0,-4.02172,-0.710393,-10,-10,-4.02172,-10 0|0:99:20:12:433:0,8,0:0,267,0:-10,-10,-10,0,-10,-10,-10,-10,-10,-10 0|0:74.6503:25:24:880:0,0,0:0,0,0:0,-7.22472,-10,-7.22472,-10,-10,-7.22472,-10,-10,-10 0|0:26.4855:8:8:297:0,0,0:0,0,0:0,-2.40824,-10,-2.40824,-10,-10,-2.40824,-10,-10,-10 0|0:53.5782:17:17:619:0,0,0:0,0,0:0,-5.11751,-10,-5.11751,-10,-10,-5.11751,-10,-10,-10 0|0:41.537:13:13:483:0,0,0:0,0,0:0,-3.91339,-10,-3.91339,-10,-10,-3.91339,-10,-10,-10 1|0:13.6984:6:1:33:2,3,0:76,104,0:-10,-6.32749,-8.86735,-4.01691,0,-6.36818,-10,-9.46941,-7.27127,-10 0|0:56.5885:18:18:653:0,0,0:0,0,0:0,-5.41854,-10,-5.41854,-10,-10,-5.41854,-10,-10,-10 0|1:99:30:17:628:12,0,0:453,0,0:-10,0,-10,-10,-10,-10,-10,-10,-10,-10 0|0:71.64:23:23:834:0,0,0:0,0,0:0,-6.92369,-10,-6.92369,-10,-10,-6.92369,-10,-10,-10 scaffold_86 1319950 . T A 4301.06 . AB=0.605096;ABP=18.0723;AC=19;AF=0.103261;AN=184;AO=157;CIGAR=1X;DP=1309;DPB=1309;DPRA=1.09348;EPP=7.00747;EPPR=4.00831;GTI=2;LEN=1;MEANALT=1;MQM=59.9809;MQMR=59.9626;NS=92;NUMALT=1;ODDS=1.70148;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5778;QR=41571;RO=1151;RPP=277.985;RPPR=2289.94;RUN=1;SAF=79;SAP=3.02413;SAR=78;SRF=541;SRP=11.9924;SRR=610;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:23.2645:5:5:180:0:0:0,-1.50515,-10 0/1:0.216623:5:0:0:5:167:-10,-1.50515,0 0/1:99:15:4:117:11:413:-10,0,-9.44218 1/1:15.4746:11:0:0:11:417:-10,-3.31133,0 0/0:32.2954:8:8:304:0:0:0,-2.40824,-10 0/0:14.2335:2:2:47:0:0:0,-0.60206,-4.465 0/0:71.4293:21:21:736:0:0:0,-6.32163,-10 0/1:99:14:5:190:9:330:-10,0,-10 0/0:38.316:10:10:343:0:0:0,-3.0103,-10 0/0:20.2542:4:4:137:0:0:0,-1.20412,-10 0/0:20.2542:4:4:128:0:0:0,-1.20412,-10 0/0:32.2954:8:8:260:0:0:0,-2.40824,-10 0/1:99:25:9:331:16:584:-10,0,-10 0/0:77.0906:32:31:1146:1:15:0,-6.62781,-10 0/1:99:20:7:241:13:494:-10,0,-10 0/1:99:15:6:200:9:330:-10,0,-10 0/0:56.3778:16:16:561:0:0:0,-4.81648,-10 0/0:41.3263:11:11:411:0:0:0,-3.31133,-10 0/0:50.3572:14:14:479:0:0:0,-4.21442,-10 0/0:83.4705:25:25:923:0:0:0,-7.52575,-10 0/0:47.3469:13:13:471:0:0:0,-3.91339,-10 0/0:74.4395:22:22:802:0:0:0,-6.62266,-10 0/0:17.2439:3:3:109:0:0:0,-0.90309,-10 0/0:38.316:10:10:361:0:0:0,-3.0103,-10 0/0:59.3881:17:17:620:0:0:0,-5.11751,-10 0/0:59.3881:17:17:614:0:0:0,-5.11751,-10 0/0:32.2954:8:8:295:0:0:0,-2.40824,-10 0/0:53.3675:15:15:558:0:0:0,-4.51545,-10 0/0:44.3366:12:12:423:0:0:0,-3.61236,-10 0/0:80.4602:24:24:895:0:0:0,-7.22472,-10 0/0:20.2542:4:4:152:0:0:0,-1.20412,-10 0/0:14.2336:2:2:76:0:0:0,-0.60206,-7.22 0/0:80.4602:24:24:869:0:0:0,-7.22472,-10 0/0:50.3572:14:14:524:0:0:0,-4.21442,-10 0/0:41.3263:11:11:408:0:0:0,-3.31133,-10 0/0:14.2336:2:2:73:0:0:0,-0.60206,-6.935 0/0:50.3572:14:14:501:0:0:0,-4.21442,-10 0/0:50.3572:14:14:504:0:0:0,-4.21442,-10 0/0:65.4087:19:19:684:0:0:0,-5.71957,-10 0/0:56.3778:16:16:594:0:0:0,-4.81648,-10 0/0:83.4705:25:25:903:0:0:0,-7.52575,-10 0/0:50.3572:14:14:530:0:0:0,-4.21442,-10 0/0:59.3881:17:17:617:0:0:0,-5.11751,-10 0/0:89.4911:27:27:962:0:0:0,-8.12781,-10 0/0:68.4189:20:20:690:0:0:0,-6.0206,-10 0/0:41.3263:11:11:412:0:0:0,-3.31133,-10 0/0:99:36:36:1289:0:0:0,-10,-10 0/0:35.3057:9:9:316:0:0:0,-2.70927,-10 0/0:50.3572:14:14:522:0:0:0,-4.21442,-10 0/0:17.5119:11:10:375:1:16:0,-0.669937,-10 0/0:47.3469:13:13:465:0:0:0,-3.91339,-10 0/0:86.4805:26:26:956:0:0:0,-7.82678,-10 0/0:38.316:10:10:376:0:0:0,-3.0103,-10 0/0:35.3057:9:9:338:0:0:0,-2.70927,-10 0/0:99:31:31:1083:0:0:0,-9.33193,-10 0/0:53.3675:15:15:545:0:0:0,-4.51545,-10 0/0:44.3366:12:12:452:0:0:0,-3.61236,-10 0/0:14.2336:2:2:74:0:0:0,-0.60206,-7.03 0/0:47.3469:13:13:480:0:0:0,-3.91339,-10 0/0:29.2851:7:7:265:0:0:0,-2.10721,-10 1/1:51.5982:23:0:0:23:850:-10,-6.92369,0 0/0:62.3984:18:18:641:0:0:0,-5.41854,-10 0/0:99:32:32:1182:0:0:0,-9.63296,-10 1/1:24.5055:14:0:0:14:516:-10,-4.21442,0 0/0:32.2954:8:8:290:0:0:0,-2.40824,-10 0/1:99:17:12:451:5:181:-10,0,-10 0/0:50.3572:15:14:525:0:0:0,-4.21442,-10 0/1:0.444621:6:0:0:6:228:-10,-1.80618,0 0/0:99:34:34:1171:0:0:0,-10,-10 0/0:32.2954:8:8:280:0:0:0,-2.40824,-10 0/0:41.3263:11:11:361:0:0:0,-3.31133,-10 0/0:47.3469:13:13:449:0:0:0,-3.91339,-10 0/0:50.3572:14:14:498:0:0:0,-4.21442,-10 0/0:32.2954:8:8:277:0:0:0,-2.40824,-10 0/0:71.4293:21:21:742:0:0:0,-6.32163,-10 0/0:29.2851:7:7:260:0:0:0,-2.10721,-10 0/0:35.3057:9:9:330:0:0:0,-2.70927,-10 0/0:44.3366:12:12:427:0:0:0,-3.61236,-10 0/0:26.2748:6:6:227:0:0:0,-1.80618,-10 1/1:18.4849:12:0:0:12:443:-10,-3.61236,0 0/0:74.4395:22:22:777:0:0:0,-6.62266,-10 0/1:99:22:8:281:14:530:-10,0,-10 0/0:62.3984:18:18:675:0:0:0,-5.41854,-10 0/0:62.3984:18:18:666:0:0:0,-5.41854,-10 0/0:71.4293:21:21:762:0:0:0,-6.32163,-10 0/0:14.2336:2:2:76:0:0:0,-0.60206,-7.22 0/0:44.3366:12:12:449:0:0:0,-3.61236,-10 0/0:50.3572:14:14:523:0:0:0,-4.21442,-10 0/1:24.3226:5:4:145:1:37:-2.89382,0,-10 0/0:68.4189:20:20:698:0:0:0,-6.0206,-10 0/1:99:13:7:264:6:227:-10,0,-10 0/0:26.2748:6:6:227:0:0:0,-1.80618,-10 scaffold_86 1382542 . C T 16290.3 . AB=0.471519;ABP=5.23675;AC=69;AF=0.375;AN=184;AO=576;CIGAR=1X;DP=1645;DPB=1645;DPRA=0.985855;EPP=3.9754;EPPR=3.30308;GTI=5;LEN=1;MEANALT=1.02326;MQM=59.9601;MQMR=59.9794;NS=92;NUMALT=1;ODDS=0.274436;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=21167;QR=39447;RO=1068;RPP=1253.78;RPPR=2304.8;RUN=1;SAF=296;SAP=3.9754;SAR=280;SRF=526;SRP=3.5308;SRR=542;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:22.7352:12:0:0:12:454:-10,-3.61236,0 0/1:0.0398034:3:0:0:3:114:-10,-0.90309,0 1/1:43.8073:19:0:0:19:680:-10,-5.71957,0 1/1:19.7249:11:0:0:11:374:-10,-3.31133,0 1/1:22.7352:12:0:0:12:453:-10,-3.61236,0 1/1:16.7146:10:0:0:10:379:-10,-3.0103,0 0/0:99:37:37:1393:0:0:0,-10,-10 0/1:99:25:16:553:9:329:-10,0,-10 0/0:28.4161:8:8:297:0:0:0,-2.40824,-10 1/1:13.7043:9:0:0:9:341:-10,-2.70927,0 1/1:19.7249:11:0:0:11:416:-10,-3.31133,0 0/1:0.685275:7:0:0:7:248:-10,-2.10721,0 0/1:99:36:16:581:20:701:-10,0,-10 1/1:99:38:0:0:38:1413:-10,-10,0 0/1:99:32:16:584:16:606:-10,0,-10 0/1:99:17:8:299:9:342:-10,0,-10 0/0:94.6391:30:30:1095:0:0:0,-9.0309,-10 1/1:19.7249:11:0:0:11:390:-10,-3.31133,0 0/1:99:18:14:527:4:152:-10,0,-10 0/1:99:36:22:780:14:503:-10,0,-10 0/1:99:14:6:226:8:303:-10,0,-10 0/1:99:33:21:770:12:449:-10,0,-10 0/0:37.447:11:11:417:0:0:0,-3.31133,-10 0/0:49.4882:15:15:565:0:0:0,-4.51545,-10 0/0:49.4882:15:15:561:0:0:0,-4.51545,-10 0/0:76.5809:24:24:904:0:0:0,-7.22472,-10 0/0:52.4985:16:16:603:0:0:0,-4.81648,-10 0/0:40.4573:12:12:455:0:0:0,-3.61236,-10 0/0:49.4882:15:15:552:0:0:0,-4.51545,-10 0/0:91.6306:29:29:1101:0:0:0,-8.72987,-10 0/0:13.3646:3:3:114:0:0:0,-0.90309,-10 0/0:16.3749:4:4:83:0:0:0,-1.20412,-7.6775 0/0:70.5603:22:22:823:0:0:0,-6.62266,-10 0/1:0.666542:1:1:38:0:0:0,-0.30103,-3.8 0/0:61.5294:19:19:687:0:0:0,-5.71957,-10 0/0:31.4264:9:9:335:0:0:0,-2.70927,-10 0/0:49.4882:15:15:549:0:0:0,-4.51545,-10 0/1:99:22:13:494:9:322:-10,0,-10 0/0:40.4573:12:12:414:0:0:0,-3.61236,-10 0/0:34.4367:10:10:365:0:0:0,-3.0103,-10 0/0:82.6014:26:26:951:0:0:0,-7.82678,-10 0/0:61.5294:19:19:687:0:0:0,-5.71957,-10 0/0:64.5397:20:20:753:0:0:0,-6.0206,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:49.4882:15:15:567:0:0:0,-4.51545,-10 0/0:46.4779:14:14:509:0:0:0,-4.21442,-10 0/0:99:49:49:1813:0:0:0,-10,-10 0/0:79.5912:25:25:945:0:0:0,-7.52575,-10 0/0:28.4161:8:8:301:0:0:0,-2.40824,-10 0/0:99:37:37:1399:0:0:0,-10,-10 0/0:28.4161:8:8:295:0:0:0,-2.40824,-10 0/0:70.5603:22:22:787:0:0:0,-6.62266,-10 0/0:46.4779:14:14:506:0:0:0,-4.21442,-10 0/0:37.447:11:11:393:0:0:0,-3.31133,-10 0/0:99:37:37:1360:0:0:0,-10,-10 0/0:40.4573:12:12:451:0:0:0,-3.61236,-10 0/0:38.5585:28:27:998:1:38:0,-3.18168,-10 0/0:19.3852:5:5:180:0:0:0,-1.50515,-10 1/1:34.7764:16:0:0:16:590:-10,-4.81648,0 1/1:37.7867:17:0:0:17:616:-10,-5.11751,0 1/1:55.8485:23:0:0:23:835:-10,-6.92369,0 1/1:28.7558:14:0:0:14:510:-10,-4.21442,0 1/1:99:38:0:0:38:1429:-10,-10,0 1/1:31.7661:15:0:0:15:554:-10,-4.51545,0 0/1:0.329135:6:0:0:6:228:-10,-1.80618,0 0/1:99:26:13:471:13:492:-10,0,-10 1/1:46.8176:21:0:0:20:726:-10,-6.0206,0 1/1:22.7352:12:0:0:12:441:-10,-3.61236,0 1/1:79.9309:31:0:0:31:1127:-10,-9.33193,0 1/1:16.7146:10:0:0:10:370:-10,-3.0103,0 1/1:31.7661:15:0:0:15:554:-10,-4.51545,0 0/0:94.6391:30:30:1116:0:0:0,-9.0309,-10 0/0:49.4882:15:15:546:0:0:0,-4.51545,-10 0/0:43.4676:13:13:480:0:0:0,-3.91339,-10 0/0:99:34:34:1228:0:0:0,-10,-10 1/1:16.7146:10:0:0:10:349:-10,-3.0103,0 1/1:31.7661:15:0:0:15:553:-10,-4.51545,0 0/0:64.5397:20:20:758:0:0:0,-6.0206,-10 0/0:13.3646:3:3:114:0:0:0,-0.90309,-10 0/0:25.4058:7:7:266:0:0:0,-2.10721,-10 0/0:99:33:33:1246:0:0:0,-9.93399,-10 0/1:99:22:13:485:9:328:-10,0,-10 0/0:43.4676:13:13:488:0:0:0,-3.91339,-10 1/1:46.8176:20:0:0:20:736:-10,-6.0206,0 1/1:43.8073:19:0:0:19:709:-10,-5.71957,0 1/1:10.694:8:0:0:8:295:-10,-2.40824,0 0/0:58.5191:18:18:653:0:0:0,-5.41854,-10 0/0:40.4573:12:12:448:0:0:0,-3.61236,-10 0/1:0.16145:5:0:0:5:153:-10,-1.50515,0 0/1:99:14:9:338:5:188:-10,0,-10 1/1:16.7146:10:0:0:10:377:-10,-3.0103,0 0/0:46.4779:14:14:527:0:0:0,-4.21442,-10 scaffold_86 1659858 . C G 10464 . AB=0.609053;ABP=28.1118;AC=31;AF=0.168478;AN=184;AO=379;CIGAR=1X;DP=2309;DPB=2309;DPRA=0.926871;EPP=4.66612;EPPR=3.37522;GTI=3;LEN=1;MEANALT=1;MQM=59.8813;MQMR=59.9212;NS=92;NUMALT=1;ODDS=0.841758;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=13710;QR=70538;RO=1928;RPP=808.718;RPPR=4017.69;RUN=1;SAF=183;SAP=3.97858;SAR=196;SRF=939;SRP=5.82601;SRR=989;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.00627514:18:1:38:17:632:-10,-0.363267,0 0/1:0.0420948:5:0:0:5:174:-10,-1.50515,0 1/1:53.8027:27:0:0:27:966:-10,-8.12781,0 1/1:26.71:18:0:0:18:666:-10,-5.41854,0 0/1:99:16:4:152:12:449:-10,0,-10 0/0:45.1591:13:13:479:0:0:0,-3.91339,-10 0/0:99:56:56:1996:0:0:0,-10,-10 0/0:84.2929:26:26:962:0:0:0,-7.82678,-10 1/1:17.6791:15:0:0:15:570:-10,-4.51545,0 0/0:24.087:6:6:205:0:0:0,-1.80618,-10 0/0:24.087:6:6:228:0:0:0,-1.80618,-10 0/0:30.1076:8:8:301:0:0:0,-2.40824,-10 0/1:99:52:22:825:30:1041:-10,0,-10 0/0:99:55:55:1990:0:0:0,-10,-10 0/1:99:31:16:607:15:557:-10,0,-10 0/0:74.2994:35:34:1235:1:24:0,-6.59198,-10 0/0:72.2518:22:22:813:0:0:0,-6.62266,-10 1/1:5.63786:11:0:0:11:409:-10,-3.31133,0 0/0:93.3234:29:29:1050:0:0:0,-8.72987,-10 0/0:99:51:50:1860:0:0:0,-10,-10 0/0:66.2312:20:20:744:0:0:0,-6.0206,-10 0/0:82.9732:38:37:1352:1:24:0,-7.45936,-10 0/0:42.1488:12:12:412:0:0:0,-3.61236,-10 0/0:78.2724:24:24:885:0:0:0,-7.22472,-10 0/0:60.2106:18:18:671:0:0:0,-5.41854,-10 0/0:99:37:37:1393:0:0:0,-10,-10 0/0:96.3333:30:30:1065:0:0:0,-9.0309,-10 0/0:42.1488:12:12:432:0:0:0,-3.61236,-10 0/0:81.2826:25:25:943:0:0:0,-7.52575,-10 0/0:99:39:39:1432:0:0:0,-10,-10 0/0:18.0664:4:4:147:0:0:0,-1.20412,-10 0/0:39.1385:11:11:416:0:0:0,-3.31133,-10 0/0:81.2826:25:25:834:0:0:0,-7.52575,-10 0/0:51.1797:15:15:561:0:0:0,-4.51545,-10 0/0:78.2724:24:24:883:0:0:0,-7.22472,-10 0/0:39.1385:11:11:416:0:0:0,-3.31133,-10 0/0:63.2209:19:19:702:0:0:0,-5.71957,-10 0/0:72.2518:22:22:803:0:0:0,-6.62266,-10 0/0:81.2826:25:25:897:0:0:0,-7.52575,-10 0/0:63.2209:19:19:689:0:0:0,-5.71957,-10 0/0:99:39:39:1392:0:0:0,-10,-10 0/0:78.2724:24:24:859:0:0:0,-7.22472,-10 0/0:75.2621:23:23:858:0:0:0,-6.92369,-10 0/0:99:45:45:1645:0:0:0,-10,-10 0/0:72.2518:22:22:828:0:0:0,-6.62266,-10 0/0:69.2415:21:21:738:0:0:0,-6.32163,-10 0/0:99:59:59:2168:0:0:0,-10,-10 0/0:87.3032:28:27:1004:0:0:0,-8.12781,-10 0/0:48.1694:14:14:526:0:0:0,-4.21442,-10 0/0:99:56:56:2031:0:0:0,-10,-10 0/0:39.1385:11:11:410:0:0:0,-3.31133,-10 0/0:99:40:40:1411:0:0:0,-10,-10 0/0:42.1488:12:12:440:0:0:0,-3.61236,-10 0/0:42.1488:12:12:453:0:0:0,-3.61236,-10 0/0:99:49:49:1818:0:0:0,-10,-10 0/0:72.2518:22:22:817:0:0:0,-6.62266,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:36.1282:10:10:377:0:0:0,-3.0103,-10 1/1:56.813:28:0:0:28:1028:-10,-8.42884,0 0/0:30.1076:8:8:304:0:0:0,-2.40824,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:78.2724:24:24:899:0:0:0,-7.22472,-10 0/0:99:61:61:2212:0:0:0,-10,-10 0/0:75.2621:23:23:845:0:0:0,-6.92369,-10 0/0:48.1694:14:14:517:0:0:0,-4.21442,-10 0/1:99:40:15:560:25:882:-10,0,-10 0/1:99:17:9:328:8:304:-10,0,-10 0/0:24.087:6:6:221:0:0:0,-1.80618,-10 0/0:99:49:49:1797:0:0:0,-10,-10 0/0:75.2621:23:23:816:0:0:0,-6.92369,-10 0/0:96.3333:30:30:1070:0:0:0,-9.0309,-10 0/0:99:47:47:1688:0:0:0,-10,-10 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:87.3032:27:27:976:0:0:0,-8.12781,-10 0/0:96.3333:30:30:1112:0:0:0,-9.0309,-10 0/0:36.1282:10:10:377:0:0:0,-3.0103,-10 0/0:72.2518:22:22:809:0:0:0,-6.62266,-10 1/1:44.7718:24:0:0:24:861:-10,-7.22472,0 0/1:0.0420948:5:0:0:5:190:-10,-1.50515,0 0/0:30.1076:8:8:296:0:0:0,-2.40824,-10 1/1:99:46:0:0:46:1672:-10,-10,0 0/0:99:58:58:2105:0:0:0,-10,-10 0/1:99:32:16:602:16:582:-10,0,-10 1/1:47.7821:25:0:0:25:914:-10,-7.52575,0 0/0:99:33:33:1239:0:0:0,-9.93399,-10 0/0:18.0664:4:4:152:0:0:0,-1.20412,-10 0/0:66.2312:20:20:728:0:0:0,-6.0206,-10 0/0:54.19:16:16:582:0:0:0,-4.81648,-10 0/1:99:8:4:151:4:151:-10,0,-10 0/1:99:19:8:292:11:372:-10,0,-10 1/1:23.6997:17:0:0:17:630:-10,-5.11751,0 1/1:26.71:18:0:0:18:612:-10,-5.41854,0 scaffold_86 1711979 . G A 239.198 . AB=0.454545;ABP=3.40511;AC=1;AF=0.00537634;AN=186;AO=10;CIGAR=1X;DP=1374;DPB=1374;DPRA=1.49704;EPP=6.48466;EPPR=11.5002;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9685;NS=93;NUMALT=1;ODDS=7.06815;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=374;QR=49955;RO=1363;RPP=24.725;RPPR=2962.73;RUN=1;SAF=7;SAP=6.48466;SAR=3;SRF=718;SRP=11.5002;SRR=645;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.8403:14:14:496:0:0:0,-4.21442,-10 0/0:66.83:13:13:472:0:0:0,-3.91339,-10 0/0:96.9321:23:23:862:0:0:0,-6.92369,-10 0/0:63.8197:12:12:447:0:0:0,-3.61236,-10 0/0:60.8094:11:11:408:0:0:0,-3.31133,-10 0/0:51.7785:8:8:284:0:0:0,-2.40824,-10 0/0:99:25:25:937:0:0:0,-7.52575,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:48.7682:7:7:262:0:0:0,-2.10721,-10 0/0:30.7064:1:1:38:0:0:0,-0.30103,-3.8 0/0:42.7476:5:5:154:0:0:0,-1.50515,-10 0/0:57.7991:10:10:367:0:0:0,-3.0103,-10 0/0:99:24:24:866:0:0:0,-7.22472,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:54.7888:9:9:336:0:0:0,-2.70927,-10 0/0:72.8506:15:15:558:0:0:0,-4.51545,-10 0/0:69.8403:14:14:531:0:0:0,-4.21442,-10 0/0:60.8094:11:11:412:0:0:0,-3.31133,-10 0/0:63.8197:12:12:409:0:0:0,-3.61236,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:84.8917:19:19:710:0:0:0,-5.71957,-10 0/0:57.7991:10:10:368:0:0:0,-3.0103,-10 0/0:45.7579:6:6:227:0:0:0,-1.80618,-10 0/0:93.9222:22:22:785:0:0:0,-6.62266,-10 0/0:75.8608:16:16:581:0:0:0,-4.81648,-10 0/0:78.8712:17:17:641:0:0:0,-5.11751,-10 0/0:51.7785:8:8:292:0:0:0,-2.40824,-10 0/0:54.7888:9:9:335:0:0:0,-2.70927,-10 0/0:78.8712:17:17:642:0:0:0,-5.11751,-10 0/0:96.9321:23:23:841:0:0:0,-6.92369,-10 0/0:48.7682:7:7:262:0:0:0,-2.10721,-10 0/0:48.7682:7:7:265:0:0:0,-2.10721,-10 0/0:81.8814:18:18:650:0:0:0,-5.41854,-10 0/0:54.7888:9:9:308:0:0:0,-2.70927,-10 0/0:54.7888:9:9:336:0:0:0,-2.70927,-10 0/0:45.7579:6:6:228:0:0:0,-1.80618,-10 0/0:78.8712:17:17:636:0:0:0,-5.11751,-10 0/0:99:24:24:901:0:0:0,-7.22472,-10 0/0:51.7785:8:8:270:0:0:0,-2.40824,-10 0/0:69.8403:14:14:524:0:0:0,-4.21442,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:75.8608:16:16:574:0:0:0,-4.81648,-10 0/0:54.7888:9:9:338:0:0:0,-2.70927,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:81.8814:18:18:644:0:0:0,-5.41854,-10 0/0:69.8403:14:14:505:0:0:0,-4.21442,-10 0/0:99:33:33:1162:0:0:0,-9.93399,-10 0/0:96.9321:23:23:869:0:0:0,-6.92369,-10 0/0:42.7476:5:5:156:0:0:0,-1.50515,-10 0/0:99:29:29:1085:0:0:0,-8.72987,-10 0/0:39.7373:4:4:130:0:0:0,-1.20412,-10 0/0:99:36:36:1338:0:0:0,-10,-10 0/0:60.8094:11:11:409:0:0:0,-3.31133,-10 0/0:45.7579:6:6:228:0:0:0,-1.80618,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:54.7888:9:9:314:0:0:0,-2.70927,-10 0/0:54.7888:9:9:336:0:0:0,-2.70927,-10 0/0:57.7991:10:10:358:0:0:0,-3.0103,-10 0/0:66.83:13:13:440:0:0:0,-3.91339,-10 0/0:72.8506:15:15:568:0:0:0,-4.51545,-10 0/0:87.902:20:20:732:0:0:0,-6.0206,-10 0/0:66.83:13:13:462:0:0:0,-3.91339,-10 0/0:93.9222:23:22:805:0:0:0,-6.62266,-10 0/0:51.7785:8:8:293:0:0:0,-2.40824,-10 0/0:66.83:13:13:487:0:0:0,-3.91339,-10 0/0:87.902:20:20:721:0:0:0,-6.0206,-10 0/0:72.8506:15:15:529:0:0:0,-4.51545,-10 0/0:54.7888:9:9:322:0:0:0,-2.70927,-10 0/0:99:29:29:1057:0:0:0,-8.72987,-10 0/0:57.7991:10:10:371:0:0:0,-3.0103,-10 0/0:90.9121:21:21:754:0:0:0,-6.32163,-10 0/1:99:22:12:434:10:374:-10,0,-10 0/0:84.8917:19:19:716:0:0:0,-5.71957,-10 0/0:63.8197:12:12:441:0:0:0,-3.61236,-10 0/0:99:24:24:862:0:0:0,-7.22472,-10 0/0:48.7682:7:7:243:0:0:0,-2.10721,-10 0/0:48.7682:7:7:262:0:0:0,-2.10721,-10 0/0:51.7785:8:8:290:0:0:0,-2.40824,-10 0/0:42.7476:5:5:186:0:0:0,-1.50515,-10 0/0:57.7991:10:10:375:0:0:0,-3.0103,-10 0/0:84.8917:19:19:717:0:0:0,-5.71957,-10 0/0:99:24:24:875:0:0:0,-7.22472,-10 0/0:90.9121:21:21:753:0:0:0,-6.32163,-10 0/0:72.8506:15:15:570:0:0:0,-4.51545,-10 0/0:66.83:13:13:487:0:0:0,-3.91339,-10 0/0:42.7476:5:5:167:0:0:0,-1.50515,-10 0/0:54.7888:9:9:340:0:0:0,-2.70927,-10 0/0:69.8403:14:14:517:0:0:0,-4.21442,-10 0/0:51.7785:8:8:303:0:0:0,-2.40824,-10 0/0:69.8403:14:14:515:0:0:0,-4.21442,-10 0/0:63.8197:12:12:443:0:0:0,-3.61236,-10 0/0:78.8712:17:17:621:0:0:0,-5.11751,-10 scaffold_86 1712037 . T C 6392.11 . AB=0.602564;ABP=17.2641;AC=32;AF=0.172043;AN=186;AO=241;CIGAR=1X;DP=1370;DPB=1370;DPRA=0.935115;EPP=9.57878;EPPR=5.50961;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9618;NS=93;NUMALT=1;ODDS=1.02331;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8729;QR=41357;RO=1126;RPP=517.685;RPPR=2362;RUN=1;SAF=133;SAP=8.64171;SAR=108;SRF=571;SRP=3.50399;SRR=555;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:32.904:14:1:34:13:489:-10,0,-0.331708 1/1:17.7041:13:0:0:13:469:-10,-3.91339,0 1/1:47.8071:23:0:0:23:786:-10,-6.92369,0 1/1:14.6938:12:0:0:12:454:-10,-3.61236,0 1/1:11.6835:11:0:0:11:404:-10,-3.31133,0 0/0:29.8415:8:8:302:0:0:0,-2.40824,-10 0/0:78.0063:24:24:903:0:0:0,-7.22472,-10 0/1:99:29:11:410:18:643:-10,0,-10 0/0:26.8312:7:7:263:0:0:0,-2.10721,-10 0/0:8.7694:1:1:38:0:0:0,-0.30103,-3.8 0/0:23.8209:6:6:224:0:0:0,-1.80618,-10 0/0:35.8621:10:10:370:0:0:0,-3.0103,-10 0/1:99:23:13:493:10:355:-10,0,-10 0/0:93.0553:29:29:1089:0:0:0,-8.72987,-10 0/1:99:10:5:159:5:163:-10,0,-10 0/0:47.9033:14:14:507:0:0:0,-4.21442,-10 0/0:47.9033:14:14:523:0:0:0,-4.21442,-10 1/1:11.6835:11:0:0:11:418:-10,-3.31133,0 0/0:38.8724:12:11:367:0:0:0,-3.31133,-10 0/0:81.0166:25:25:932:0:0:0,-7.52575,-10 0/0:65.9651:20:20:747:0:0:0,-6.0206,-10 0/1:99:10:6:202:4:143:-10,0,-10 0/0:23.8209:6:6:219:0:0:0,-1.80618,-10 0/0:71.9857:22:22:806:0:0:0,-6.62266,-10 0/0:53.9239:16:16:583:0:0:0,-4.81648,-10 0/0:56.9342:17:17:639:0:0:0,-5.11751,-10 0/0:29.8415:8:8:302:0:0:0,-2.40824,-10 0/0:32.8518:9:9:331:0:0:0,-2.70927,-10 0/0:56.9342:17:17:628:0:0:0,-5.11751,-10 0/0:78.0063:24:24:886:0:0:0,-7.22472,-10 0/0:26.8312:7:7:220:0:0:0,-2.10721,-10 0/0:26.8312:7:7:262:0:0:0,-2.10721,-10 0/0:62.9548:19:19:692:0:0:0,-5.71957,-10 0/0:32.8518:9:9:341:0:0:0,-2.70927,-10 0/0:32.8518:9:9:329:0:0:0,-2.70927,-10 0/0:23.8209:6:6:227:0:0:0,-1.80618,-10 0/0:53.9239:17:16:594:0:0:0,-4.81648,-10 0/0:78.0063:24:24:907:0:0:0,-7.22472,-10 0/0:29.8415:8:8:266:0:0:0,-2.40824,-10 0/0:47.9033:14:14:523:0:0:0,-4.21442,-10 0/0:84.0268:26:26:960:0:0:0,-7.82678,-10 0/0:53.9239:16:16:585:0:0:0,-4.81648,-10 0/0:35.8621:10:10:379:0:0:0,-3.0103,-10 0/0:96.067:30:30:1128:0:0:0,-9.0309,-10 0/0:56.9342:17:17:614:0:0:0,-5.11751,-10 0/0:50.9136:15:15:541:0:0:0,-4.51545,-10 0/0:99:32:32:1122:0:0:0,-9.63296,-10 0/0:74.996:23:23:844:0:0:0,-6.92369,-10 0/0:20.8106:5:5:154:0:0:0,-1.50515,-10 0/0:93.0553:29:29:1071:0:0:0,-8.72987,-10 0/0:17.8003:4:4:129:0:0:0,-1.20412,-10 0/0:99:37:37:1344:0:0:0,-10,-10 0/0:35.8621:10:10:380:0:0:0,-3.0103,-10 0/0:23.8209:6:6:228:0:0:0,-1.80618,-10 0/0:84.0268:26:26:956:0:0:0,-7.82678,-10 0/0:29.8415:8:8:304:0:0:0,-2.40824,-10 0/0:32.8518:9:9:316:0:0:0,-2.70927,-10 0/0:32.8518:9:9:332:0:0:0,-2.70927,-10 1/1:14.6938:12:0:0:12:430:-10,-3.61236,0 0/0:50.9136:15:15:570:0:0:0,-4.51545,-10 0/0:65.9651:20:20:742:0:0:0,-6.0206,-10 0/0:47.9033:14:14:512:0:0:0,-4.21442,-10 0/0:71.9857:23:22:810:0:0:0,-6.62266,-10 0/0:29.8415:8:8:300:0:0:0,-2.40824,-10 0/0:47.9033:14:14:528:0:0:0,-4.21442,-10 0/0:16.9279:20:19:685:1:38:0,-0.91957,-10 0/1:99:14:8:285:6:206:-10,0,-10 0/0:32.8518:9:9:320:0:0:0,-2.70927,-10 0/0:93.0553:29:29:1056:0:0:0,-8.72987,-10 0/0:32.8518:9:9:334:0:0:0,-2.70927,-10 0/0:68.9754:21:21:786:0:0:0,-6.32163,-10 0/0:71.9857:22:22:826:0:0:0,-6.62266,-10 0/0:62.9548:19:19:691:0:0:0,-5.71957,-10 0/0:41.8827:12:12:433:0:0:0,-3.61236,-10 0/0:71.9857:22:22:803:0:0:0,-6.62266,-10 0/0:26.8312:7:7:241:0:0:0,-2.10721,-10 0/0:23.8209:6:6:224:0:0:0,-1.80618,-10 0/1:0.63196:8:0:0:8:299:-10,-2.40824,0 0/1:0.0741458:5:0:0:5:190:-10,-1.50515,0 0/0:38.8724:11:11:413:0:0:0,-3.31133,-10 1/1:35.7659:19:0:0:19:699:-10,-5.71957,0 0/0:81.0166:25:25:908:0:0:0,-7.52575,-10 0/1:99:20:8:301:12:428:-10,0,-10 1/1:23.7247:15:0:0:15:541:-10,-4.51545,0 0/0:44.893:13:13:479:0:0:0,-3.91339,-10 0/0:20.8106:5:5:181:0:0:0,-1.50515,-10 0/0:32.8518:9:9:337:0:0:0,-2.70927,-10 0/0:47.9033:14:14:515:0:0:0,-4.21442,-10 0/1:99:8:3:112:5:178:-10,0,-9.79328 0/1:99:14:7:260:7:256:-10,0,-10 1/1:17.7041:13:0:0:13:458:-10,-3.91339,0 1/1:29.7453:17:0:0:17:644:-10,-5.11751,0 scaffold_86 1875901 . A T 688.928 . AB=0.684211;ABP=14.2105;AC=1;AF=0.00543478;AN=184;AO=27;CIGAR=1X;DP=2204;DPB=2204;DPRA=1.4761;EPP=6.95112;EPPR=11.6453;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.891;NS=92;NUMALT=1;ODDS=3.26986;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1022;QR=78507;RO=2175;RPP=61.6401;RPPR=4725.96;RUN=1;SAF=17;SAP=6.95112;SAR=10;SRF=1041;SRP=11.6453;SRR=1134;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:38.7638:13:13:484:0:0:0,-3.91339,-10 0/0:47.7947:16:16:599:0:0:0,-4.81648,-10 0/0:65.8565:22:22:738:0:0:0,-6.62266,-10 0/0:41.7741:14:14:508:0:0:0,-4.21442,-10 0/0:59.8359:20:20:737:0:0:0,-6.0206,-10 0/0:47.7947:16:16:547:0:0:0,-4.81648,-10 0/0:99:37:37:1359:0:0:0,-10,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:29.7329:10:10:335:0:0:0,-3.0103,-10 0/0:20.702:7:7:254:0:0:0,-2.10721,-10 0/0:14.6814:5:5:179:0:0:0,-1.50515,-10 0/0:35.7535:12:12:439:0:0:0,-3.61236,-10 0/1:99:38:12:448:26:984:-10,0,-10 0/0:99:46:46:1703:0:0:0,-10,-10 0/0:99:45:45:1634:0:0:0,-10,-10 0/0:74.8874:25:25:916:0:0:0,-7.52575,-10 0/0:92.9479:31:31:1161:0:0:0,-9.33193,-10 0/0:44.7844:15:15:538:0:0:0,-4.51545,-10 0/0:89.9382:31:30:1051:0:0:0,-9.0309,-10 0/0:99:52:52:1909:0:0:0,-10,-10 0/0:74.8874:25:25:870:0:0:0,-7.52575,-10 0/0:95.9569:32:32:1136:0:0:0,-9.63296,-10 0/0:20.702:7:7:233:0:0:0,-2.10721,-10 0/0:71.8771:24:24:842:0:0:0,-7.22472,-10 0/0:44.7844:15:15:524:0:0:0,-4.51545,-10 0/0:86.9283:29:29:973:0:0:0,-8.72987,-10 0/0:50.805:17:17:640:0:0:0,-5.11751,-10 0/0:71.8771:24:24:849:0:0:0,-7.22472,-10 0/0:47.7947:16:16:567:0:0:0,-4.81648,-10 0/0:98.9645:33:33:1221:0:0:0,-9.93399,-10 0/0:23.7123:8:8:271:0:0:0,-2.40824,-10 0/0:14.6814:5:5:182:0:0:0,-1.50515,-10 0/0:80.9079:27:27:958:0:0:0,-8.12781,-10 0/0:26.7226:9:9:341:0:0:0,-2.70927,-10 0/0:89.9382:30:30:1091:0:0:0,-9.0309,-10 0/0:41.7741:14:14:509:0:0:0,-4.21442,-10 0/0:47.7947:16:16:571:0:0:0,-4.81648,-10 0/0:99:34:34:1181:0:0:0,-10,-10 0/0:80.9079:27:27:967:0:0:0,-8.12781,-10 0/0:65.8565:22:22:777:0:0:0,-6.62266,-10 0/0:95.9569:32:32:1120:0:0:0,-9.63296,-10 0/0:68.8668:23:23:864:0:0:0,-6.92369,-10 0/0:80.9079:27:27:966:0:0:0,-8.12781,-10 0/0:99:36:36:1277:0:0:0,-10,-10 0/0:92.9479:31:31:1115:0:0:0,-9.33193,-10 0/0:92.9479:31:31:1129:0:0:0,-9.33193,-10 0/0:99:49:48:1748:0:0:0,-10,-10 0/0:89.9382:30:30:1082:0:0:0,-9.0309,-10 0/0:56.8256:19:19:678:0:0:0,-5.71957,-10 0/0:99:44:44:1581:0:0:0,-10,-10 0/0:59.8359:20:20:713:0:0:0,-6.0206,-10 0/0:83.9181:28:28:1020:0:0:0,-8.42884,-10 0/0:50.805:17:17:604:0:0:0,-5.11751,-10 0/0:23.7123:8:8:296:0:0:0,-2.40824,-10 0/0:99:49:49:1740:0:0:0,-10,-10 0/0:50.805:17:17:617:0:0:0,-5.11751,-10 0/0:74.8874:25:25:917:0:0:0,-7.52575,-10 0/0:56.8256:19:19:691:0:0:0,-5.71957,-10 0/0:68.8668:23:23:845:0:0:0,-6.92369,-10 0/0:44.7844:15:15:533:0:0:0,-4.51545,-10 0/0:86.9283:29:29:1045:0:0:0,-8.72987,-10 0/0:65.8565:22:22:795:0:0:0,-6.62266,-10 0/0:99:47:47:1711:0:0:0,-10,-10 0/0:50.805:17:17:633:0:0:0,-5.11751,-10 0/0:56.8256:19:19:721:0:0:0,-5.71957,-10 0/0:99:48:48:1740:0:0:0,-10,-10 0/0:56.8256:19:19:682:0:0:0,-5.71957,-10 0/0:35.7535:12:12:434:0:0:0,-3.61236,-10 0/0:99:37:37:1339:0:0:0,-10,-10 0/0:41.7741:14:14:517:0:0:0,-4.21442,-10 0/0:77.8977:26:26:918:0:0:0,-7.82678,-10 0/0:74.8874:25:25:894:0:0:0,-7.52575,-10 0/0:99:36:36:1332:0:0:0,-10,-10 0/0:59.8359:20:20:739:0:0:0,-6.0206,-10 0/0:59.8359:20:20:711:0:0:0,-6.0206,-10 0/0:38.7638:13:13:489:0:0:0,-3.91339,-10 0/0:50.805:17:17:581:0:0:0,-5.11751,-10 0/0:41.7741:14:14:489:0:0:0,-4.21442,-10 0/0:23.7123:8:8:299:0:0:0,-2.40824,-10 0/0:53.8153:18:18:658:0:0:0,-5.41854,-10 0/0:99:35:35:1244:0:0:0,-10,-10 0/0:99:40:40:1455:0:0:0,-10,-10 0/0:68.8668:23:23:817:0:0:0,-6.92369,-10 0/0:98.9645:33:33:1198:0:0:0,-9.93399,-10 0/0:48.444:32:31:1132:1:38:0,-4.32781,-10 0/0:35.7535:12:12:444:0:0:0,-3.61236,-10 0/0:44.7844:15:15:555:0:0:0,-4.51545,-10 0/0:62.8462:21:21:770:0:0:0,-6.32163,-10 0/0:26.7226:9:9:339:0:0:0,-2.70927,-10 0/0:68.8668:23:23:852:0:0:0,-6.92369,-10 0/0:80.9079:27:27:973:0:0:0,-8.12781,-10 0/0:77.8977:26:26:928:0:0:0,-7.82678,-10 scaffold_86 1875913 . C A 819.251 . AB=0.571429;ABP=5.49198;AC=2;AF=0.0108696;AN=184;AO=34;CIGAR=1X;DP=2218;DPB=2218;DPRA=1.47421;EPP=5.30951;EPPR=14.8286;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9024;NS=92;NUMALT=1;ODDS=7.73903;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1221;QR=80206;RO=2183;RPP=76.8404;RPPR=4734.65;RUN=1;SAF=20;SAP=5.30951;SAR=14;SRF=1038;SRP=14.3988;SRR=1145;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.6984:13:13:480:0:0:0,-3.91339,-10 0/0:66.7293:16:16:601:0:0:0,-4.81648,-10 0/0:84.7908:22:22:811:0:0:0,-6.62266,-10 0/0:60.7087:14:14:524:0:0:0,-4.21442,-10 0/0:78.7704:20:20:747:0:0:0,-6.0206,-10 0/0:66.7293:16:16:584:0:0:0,-4.81648,-10 0/0:99:37:36:1327:0:0:0,-10,-10 0/0:99:35:35:1327:0:0:0,-10,-10 0/0:48.6675:10:10:358:0:0:0,-3.0103,-10 0/0:39.6366:7:7:262:0:0:0,-2.10721,-10 0/0:33.616:5:5:180:0:0:0,-1.50515,-10 0/0:54.6881:12:12:438:0:0:0,-3.61236,-10 0/0:99:38:38:1426:0:0:0,-10,-10 0/0:99:46:46:1687:0:0:0,-10,-10 0/0:99:45:45:1643:0:0:0,-10,-10 0/0:96.8281:26:26:969:0:0:0,-7.82678,-10 0/0:99:32:32:1155:0:0:0,-9.63296,-10 0/0:63.719:15:15:546:0:0:0,-4.51545,-10 0/0:99:32:32:1196:0:0:0,-9.63296,-10 0/0:99:52:52:1917:0:0:0,-10,-10 0/0:96.8281:26:26:922:0:0:0,-7.82678,-10 0/0:99:32:32:1153:0:0:0,-9.63296,-10 0/0:39.6366:7:7:237:0:0:0,-2.10721,-10 0/0:93.8199:25:25:906:0:0:0,-7.52575,-10 0/0:63.719:15:15:562:0:0:0,-4.51545,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:69.7396:17:17:620:0:0:0,-5.11751,-10 0/0:90.8106:24:24:865:0:0:0,-7.22472,-10 0/0:66.7293:16:16:577:0:0:0,-4.81648,-10 0/0:99:33:33:1249:0:0:0,-9.93399,-10 0/0:42.6469:8:8:292:0:0:0,-2.40824,-10 0/0:33.616:5:5:168:0:0:0,-1.50515,-10 0/0:99:27:27:1000:0:0:0,-8.12781,-10 0/0:45.6572:9:9:342:0:0:0,-2.70927,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:60.7087:14:14:510:0:0:0,-4.21442,-10 0/0:66.7293:16:16:548:0:0:0,-4.81648,-10 0/0:99:34:34:1199:0:0:0,-10,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:84.7908:22:22:791:0:0:0,-6.62266,-10 0/0:99:32:32:1125:0:0:0,-9.63296,-10 0/0:87.8014:23:23:864:0:0:0,-6.92369,-10 0/0:99:27:27:1017:0:0:0,-8.12781,-10 0/0:99:37:37:1330:0:0:0,-10,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:99:31:31:1160:0:0:0,-9.33193,-10 0/0:72.3107:49:47:1707:2:72:0,-4.84006,-10 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:75.7601:19:19:709:0:0:0,-5.71957,-10 0/0:99:44:44:1626:0:0:0,-10,-10 0/0:78.7704:20:20:744:0:0:0,-6.0206,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:69.7396:17:17:621:0:0:0,-5.11751,-10 0/0:42.6469:8:8:298:0:0:0,-2.40824,-10 0/0:99:50:50:1791:0:0:0,-10,-10 0/0:72.7499:18:18:640:0:0:0,-5.41854,-10 0/0:93.8199:25:25:909:0:0:0,-7.52575,-10 0/0:75.7601:19:19:708:0:0:0,-5.71957,-10 0/0:87.8014:23:23:858:0:0:0,-6.92369,-10 0/0:63.719:15:15:537:0:0:0,-4.51545,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:84.7908:22:22:819:0:0:0,-6.62266,-10 0/0:99:47:47:1747:0:0:0,-10,-10 0/0:69.7396:17:17:643:0:0:0,-5.11751,-10 0/0:75.7601:19:19:716:0:0:0,-5.71957,-10 0/0:99:49:49:1814:0:0:0,-10,-10 0/0:75.7601:19:19:706:0:0:0,-5.71957,-10 0/0:57.6984:13:13:493:0:0:0,-3.91339,-10 0/0:99:37:37:1356:0:0:0,-10,-10 0/0:60.7087:14:14:512:0:0:0,-4.21442,-10 0/0:96.8281:26:26:921:0:0:0,-7.82678,-10 0/0:93.8199:25:25:911:0:0:0,-7.52575,-10 0/1:99:36:15:565:21:760:-10,0,-10 0/0:78.7704:20:20:747:0:0:0,-6.0206,-10 0/1:99:20:9:322:11:389:-10,0,-10 0/0:57.6984:13:13:494:0:0:0,-3.91339,-10 0/0:69.7396:17:17:632:0:0:0,-5.11751,-10 0/0:63.719:15:15:564:0:0:0,-4.51545,-10 0/0:42.6469:8:8:302:0:0:0,-2.40824,-10 0/0:72.7499:18:18:629:0:0:0,-5.41854,-10 0/0:99:35:35:1313:0:0:0,-10,-10 0/0:99:40:40:1473:0:0:0,-10,-10 0/0:87.8014:23:23:863:0:0:0,-6.92369,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:99:32:32:1186:0:0:0,-9.63296,-10 0/0:54.6881:12:12:455:0:0:0,-3.61236,-10 0/0:66.7293:16:16:602:0:0:0,-4.81648,-10 0/0:81.7806:21:21:773:0:0:0,-6.32163,-10 0/0:45.6572:9:9:331:0:0:0,-2.70927,-10 0/0:87.8014:23:23:837:0:0:0,-6.92369,-10 0/0:99:27:27:942:0:0:0,-8.12781,-10 0/0:96.8281:26:26:957:0:0:0,-7.82678,-10 scaffold_86 1914661 . G A 1039.78 . AB=0.513158;ABP=3.12459;AC=3;AF=0.0163043;AN=184;AO=40;CIGAR=1X;DP=2020;DPB=2020;DPRA=1.04979;EPP=3.87889;EPPR=3.54164;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9742;NS=92;NUMALT=1;ODDS=6.44534;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1496;QR=72038;RO=1978;RPP=89.8692;RPPR=4298.18;RUN=1;SAF=22;SAP=3.87889;SAR=18;SRF=978;SRP=3.54164;SRR=1000;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.0081:18:18:665:0:0:0,-5.41854,-10 0/0:49.9257:10:10:376:0:0:0,-3.0103,-10 0/0:83.0389:21:21:722:0:0:0,-6.32163,-10 0/0:55.9463:12:12:455:0:0:0,-3.61236,-10 0/0:55.9463:12:12:454:0:0:0,-3.61236,-10 0/0:61.9669:14:14:486:0:0:0,-4.21442,-10 0/0:99:39:39:1448:0:0:0,-10,-10 0/0:89.0592:23:23:845:0:0:0,-6.92369,-10 0/0:64.9772:15:15:560:0:0:0,-4.51545,-10 0/0:34.8742:5:5:165:0:0:0,-1.50515,-10 0/0:40.8948:7:7:263:0:0:0,-2.10721,-10 0/0:31.8639:4:4:149:0:0:0,-1.20412,-10 0/0:99:37:37:1319:0:0:0,-10,-10 0/0:99:47:47:1725:0:0:0,-10,-10 0/0:99:27:27:991:0:0:0,-8.12781,-10 0/0:99:32:32:1169:0:0:0,-9.63296,-10 0/0:99:29:29:1048:0:0:0,-8.72987,-10 0/0:58.9566:13:13:491:0:0:0,-3.91339,-10 0/0:99:28:28:1041:0:0:0,-8.42884,-10 0/0:99:44:43:1493:0:0:0,-10,-10 0/0:92.0691:24:24:882:0:0:0,-7.22472,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:67.9875:17:16:590:0:0:0,-4.81648,-10 0/0:74.0081:18:18:682:0:0:0,-5.41854,-10 0/0:92.0691:24:24:893:0:0:0,-7.22472,-10 0/0:99:29:29:1069:0:0:0,-8.72987,-10 0/0:77.0184:19:19:695:0:0:0,-5.71957,-10 0/0:37.8845:6:6:228:0:0:0,-1.80618,-10 0/0:80.0287:20:20:708:0:0:0,-6.0206,-10 0/0:99:42:42:1514:0:0:0,-10,-10 0/0:43.9051:8:8:258:0:0:0,-2.40824,-10 0/0:46.9154:9:9:316:0:0:0,-2.70927,-10 0/0:80.0287:20:20:758:0:0:0,-6.0206,-10 0/0:74.0081:18:18:632:0:0:0,-5.41854,-10 0/0:80.0287:20:20:680:0:0:0,-6.0206,-10 0/0:61.9669:14:14:525:0:0:0,-4.21442,-10 0/0:52.936:11:11:416:0:0:0,-3.31133,-10 0/0:99:38:38:1390:0:0:0,-10,-10 0/0:70.9978:17:17:639:0:0:0,-5.11751,-10 0/0:55.9463:12:12:456:0:0:0,-3.61236,-10 0/0:95.0785:25:25:902:0:0:0,-7.52575,-10 0/0:99:35:35:1284:0:0:0,-10,-10 0/0:83.0389:21:21:772:0:0:0,-6.32163,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:77.0184:19:19:698:0:0:0,-5.71957,-10 0/0:80.0287:20:20:732:0:0:0,-6.0206,-10 0/0:99:40:40:1472:0:0:0,-10,-10 0/0:99:38:38:1387:0:0:0,-10,-10 0/0:58.9566:13:13:484:0:0:0,-3.91339,-10 0/0:99:36:36:1127:0:0:0,-10,-10 0/0:61.9669:14:14:503:0:0:0,-4.21442,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:55.9463:12:12:456:0:0:0,-3.61236,-10 0/0:40.8948:7:7:263:0:0:0,-2.10721,-10 0/0:99:50:50:1812:0:0:0,-10,-10 0/0:74.0081:18:18:650:0:0:0,-5.41854,-10 0/0:67.9875:16:16:578:0:0:0,-4.81648,-10 0/0:52.936:11:11:403:0:0:0,-3.31133,-10 0/0:49.9257:10:10:355:0:0:0,-3.0103,-10 0/0:43.3835:16:15:525:1:16:0,-2.01236,-10 0/0:99:28:28:1004:0:0:0,-8.42884,-10 0/0:89.0592:23:23:854:0:0:0,-6.92369,-10 0/1:99:36:24:898:12:454:-10,0,-10 0/0:70.9978:17:17:621:0:0:0,-5.11751,-10 0/1:0.00687022:12:0:0:12:456:-10,-3.61236,0 0/1:99:28:13:478:15:570:-10,0,-10 0/0:89.0592:23:23:853:0:0:0,-6.92369,-10 0/0:64.9772:15:15:550:0:0:0,-4.51545,-10 0/0:99:39:39:1359:0:0:0,-10,-10 0/0:61.9669:14:14:521:0:0:0,-4.21442,-10 0/0:86.0491:22:22:786:0:0:0,-6.62266,-10 0/0:99:29:29:1025:0:0:0,-8.72987,-10 0/0:99:36:36:1336:0:0:0,-10,-10 0/0:95.0785:25:25:933:0:0:0,-7.52575,-10 0/0:92.0691:24:24:885:0:0:0,-7.22472,-10 0/0:55.9463:12:12:447:0:0:0,-3.61236,-10 0/0:99:27:27:978:0:0:0,-8.12781,-10 0/0:70.9978:17:17:632:0:0:0,-5.11751,-10 0/0:64.9772:15:15:548:0:0:0,-4.51545,-10 0/0:37.8845:6:6:206:0:0:0,-1.80618,-10 0/0:99:49:49:1818:0:0:0,-10,-10 0/0:99:39:39:1420:0:0:0,-10,-10 0/0:95.0785:25:25:912:0:0:0,-7.52575,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:99:28:28:1050:0:0:0,-8.42884,-10 0/0:43.9051:8:8:301:0:0:0,-2.40824,-10 0/0:55.9463:12:12:452:0:0:0,-3.61236,-10 0/0:67.9875:16:16:598:0:0:0,-4.81648,-10 0/0:28.8536:3:3:113:0:0:0,-0.90309,-10 0/0:80.0287:20:20:757:0:0:0,-6.0206,-10 0/0:99:27:27:925:0:0:0,-8.12781,-10 0/0:70.9978:17:17:624:0:0:0,-5.11751,-10 scaffold_86 1991627 . A G 721.49 . AB=1;ABP=26.8965;AC=3;AF=0.0163043;AN=184;AO=33;CIGAR=1X;DP=1415;DPB=1415;DPRA=1.40602;EPP=6.23461;EPPR=5.65732;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9695;NS=92;NUMALT=1;ODDS=0.784463;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1206;QR=50590;RO=1379;RPP=74.6689;RPPR=2997.47;RUN=1;SAF=13;SAP=6.23461;SAR=20;SRF=710;SRP=5.65732;SRR=669;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:32.7007:7:7:252:0:0:0,-2.10721,-10 0/0:29.6904:6:6:226:0:0:0,-1.80618,-10 0/0:83.8757:24:24:811:0:0:0,-7.22472,-10 0/0:35.711:8:8:304:0:0:0,-2.40824,-10 0/0:47.7522:12:12:432:0:0:0,-3.61236,-10 0/0:23.6698:4:4:152:0:0:0,-1.20412,-10 0/0:45.2798:27:26:984:1:38:0,-2.89645,-10 0/0:47.7522:12:12:436:0:0:0,-3.61236,-10 0/0:32.7007:7:7:243:0:0:0,-2.10721,-10 0/0:29.6904:6:6:226:0:0:0,-1.80618,-10 0/0:29.6904:6:6:226:0:0:0,-1.80618,-10 0/0:23.6698:4:4:148:0:0:0,-1.20412,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:92.9059:27:27:967:0:0:0,-8.12781,-10 0/0:65.814:18:18:642:0:0:0,-5.41854,-10 0/0:65.814:19:18:655:0:0:0,-5.41854,-10 0/0:45.2798:27:26:985:1:38:0,-2.89645,-10 0/0:59.7934:16:16:586:0:0:0,-4.81648,-10 0/0:71.8346:20:20:733:0:0:0,-6.0206,-10 0/0:99:31:31:1164:0:0:0,-9.33193,-10 0/0:83.8757:24:24:855:0:0:0,-7.22472,-10 0/0:68.8243:19:19:716:0:0:0,-5.71957,-10 0/0:38.7213:9:9:339:0:0:0,-2.70927,-10 0/0:62.8037:17:17:646:0:0:0,-5.11751,-10 0/0:68.8243:19:19:712:0:0:0,-5.71957,-10 0/0:80.8654:23:23:851:0:0:0,-6.92369,-10 0/0:59.7934:16:16:550:0:0:0,-4.81648,-10 0/0:47.7522:12:12:425:0:0:0,-3.61236,-10 0/0:62.8037:17:17:593:0:0:0,-5.11751,-10 0/0:83.8757:24:24:886:0:0:0,-7.22472,-10 0/0:23.6698:4:4:152:0:0:0,-1.20412,-10 0/0:38.7213:9:9:342:0:0:0,-2.70927,-10 0/0:41.7316:10:10:379:0:0:0,-3.0103,-10 0/0:26.6801:5:5:190:0:0:0,-1.50515,-10 0/0:53.7728:14:14:509:0:0:0,-4.21442,-10 0/0:23.6698:4:4:151:0:0:0,-1.20412,-10 0/0:38.7213:9:9:323:0:0:0,-2.70927,-10 0/0:86.8859:25:25:907:0:0:0,-7.52575,-10 0/0:62.8037:17:17:623:0:0:0,-5.11751,-10 0/0:44.7419:11:11:389:0:0:0,-3.31133,-10 0/0:95.9115:28:28:1035:0:0:0,-8.42884,-10 0/0:65.814:18:18:642:0:0:0,-5.41854,-10 0/0:65.814:18:18:645:0:0:0,-5.41854,-10 0/0:89.896:26:26:943:0:0:0,-7.82678,-10 0/0:65.814:18:18:674:0:0:0,-5.41854,-10 0/0:53.7728:14:14:506:0:0:0,-4.21442,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/0:59.7934:16:16:600:0:0:0,-4.81648,-10 0/0:38.7213:9:9:339:0:0:0,-2.70927,-10 0/0:59.7934:16:16:597:0:0:0,-4.81648,-10 0/0:50.7625:13:13:463:0:0:0,-3.91339,-10 0/0:74.8449:21:21:724:0:0:0,-6.32163,-10 0/0:44.7419:11:11:418:0:0:0,-3.31133,-10 0/0:41.7316:10:10:353:0:0:0,-3.0103,-10 0/0:99:36:36:1308:0:0:0,-10,-10 0/0:47.7522:12:12:455:0:0:0,-3.61236,-10 0/0:56.7831:15:15:558:0:0:0,-4.51545,-10 0/0:38.7213:9:9:320:0:0:0,-2.70927,-10 0/0:53.7728:14:14:527:0:0:0,-4.21442,-10 0/0:32.7007:7:7:265:0:0:0,-2.10721,-10 0/0:77.8552:22:22:835:0:0:0,-6.62266,-10 0/0:59.7934:16:16:605:0:0:0,-4.81648,-10 0/0:92.9059:27:27:1020:0:0:0,-8.12781,-10 0/0:59.7934:16:16:599:0:0:0,-4.81648,-10 0/0:23.6698:4:4:143:0:0:0,-1.20412,-10 0/0:77.8552:23:22:832:0:0:0,-6.62266,-10 0/0:38.7213:9:9:308:0:0:0,-2.70927,-10 0/0:35.711:8:8:282:0:0:0,-2.40824,-10 0/0:86.8859:25:25:910:0:0:0,-7.52575,-10 0/0:47.7522:12:12:430:0:0:0,-3.61236,-10 0/1:1.34587:11:0:0:11:396:-10,-3.31133,0 1/1:11.0551:20:0:0:20:734:-10,-6.0206,0 0/0:74.8449:21:21:777:0:0:0,-6.32163,-10 0/0:77.8552:22:22:803:0:0:0,-6.62266,-10 0/0:74.8449:21:21:795:0:0:0,-6.32163,-10 0/0:38.7213:9:9:311:0:0:0,-2.70927,-10 0/0:47.7522:12:12:456:0:0:0,-3.61236,-10 0/0:32.7007:7:7:266:0:0:0,-2.10721,-10 0/0:26.6801:5:5:190:0:0:0,-1.50515,-10 0/0:32.7007:7:7:266:0:0:0,-2.10721,-10 0/0:99:31:31:1090:0:0:0,-9.33193,-10 0/0:65.814:18:18:668:0:0:0,-5.41854,-10 0/0:71.8346:20:20:737:0:0:0,-6.0206,-10 0/0:47.7522:12:12:449:0:0:0,-3.61236,-10 0/0:74.8449:21:21:792:0:0:0,-6.32163,-10 0/0:14.6389:1:1:38:0:0:0,-0.30103,-3.8 0/0:47.7522:12:12:442:0:0:0,-3.61236,-10 0/0:59.7934:16:16:600:0:0:0,-4.81648,-10 0/0:26.6801:5:5:186:0:0:0,-1.50515,-10 0/0:29.6904:6:6:228:0:0:0,-1.80618,-10 0/0:56.7831:15:15:535:0:0:0,-4.51545,-10 0/0:59.7934:17:16:573:0:0:0,-4.81648,-10 scaffold_86 1991628 . T C 1665.9 . AB=0.52459;ABP=3.65106;AC=8;AF=0.0434783;AN=184;AO=64;CIGAR=1X;DP=1415;DPB=1415;DPRA=0.990719;EPP=3.14602;EPPR=5.21724;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9829;NS=92;NUMALT=1;ODDS=3.71833;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2379;QR=49720;RO=1347;RPP=141.985;RPPR=2927.98;RUN=1;SAF=33;SAP=3.14602;SAR=31;SRF=692;SRP=5.21724;SRR=655;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:34.4243:7:7:257:0:0:0,-2.10721,-10 0/0:31.414:6:6:226:0:0:0,-1.80618,-10 0/0:82.5891:24:23:827:0:0:0,-6.92369,-10 0/0:37.4346:8:8:304:0:0:0,-2.40824,-10 0/0:49.4758:12:12:431:0:0:0,-3.61236,-10 0/1:0.000804325:4:0:0:4:152:-10,-1.20412,0 0/0:94.6278:27:27:1023:0:0:0,-8.12781,-10 0/0:49.4758:12:12:453:0:0:0,-3.61236,-10 0/0:34.4243:7:7:264:0:0:0,-2.10721,-10 0/1:0.0032182:6:0:0:6:221:-10,-1.80618,0 0/1:0.0032182:6:0:0:6:228:-10,-1.80618,0 0/0:22.3831:4:3:114:0:0:0,-0.90309,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/1:99:27:14:487:13:468:-10,0,-10 0/0:67.5376:18:18:633:0:0:0,-5.41854,-10 0/0:70.5479:19:19:708:0:0:0,-5.71957,-10 0/0:94.6278:27:27:1008:0:0:0,-8.12781,-10 0/0:61.517:16:16:585:0:0:0,-4.81648,-10 0/1:99:20:10:357:10:376:-10,0,-10 0/0:99:31:31:1172:0:0:0,-9.33193,-10 0/0:85.5995:24:24:853:0:0:0,-7.22472,-10 0/0:70.5479:19:19:717:0:0:0,-5.71957,-10 0/0:40.4449:9:9:328:0:0:0,-2.70927,-10 0/0:64.5273:17:17:639:0:0:0,-5.11751,-10 0/0:70.5479:19:19:721:0:0:0,-5.71957,-10 0/0:82.5891:23:23:863:0:0:0,-6.92369,-10 0/0:61.517:16:16:557:0:0:0,-4.81648,-10 0/0:49.4758:12:12:449:0:0:0,-3.61236,-10 0/0:61.517:17:16:582:0:0:0,-4.81648,-10 0/0:85.5995:24:24:889:0:0:0,-7.22472,-10 0/0:25.3934:4:4:148:0:0:0,-1.20412,-10 0/0:40.4449:9:9:340:0:0:0,-2.70927,-10 0/0:43.4552:10:10:380:0:0:0,-3.0103,-10 0/0:28.4037:5:5:190:0:0:0,-1.50515,-10 0/0:55.4964:14:14:517:0:0:0,-4.21442,-10 0/0:25.3934:4:4:150:0:0:0,-1.20412,-10 0/0:40.4449:9:9:333:0:0:0,-2.70927,-10 0/0:88.6091:25:25:895:0:0:0,-7.52575,-10 0/0:64.5273:17:17:642:0:0:0,-5.11751,-10 0/0:46.4655:11:11:395:0:0:0,-3.31133,-10 0/0:97.6357:28:28:1011:0:0:0,-8.42884,-10 0/0:67.5376:18:18:655:0:0:0,-5.41854,-10 0/0:67.5376:18:18:648:0:0:0,-5.41854,-10 0/0:91.6202:26:26:973:0:0:0,-7.82678,-10 0/0:67.5376:18:18:673:0:0:0,-5.41854,-10 0/0:55.4964:14:14:511:0:0:0,-4.21442,-10 0/0:99:34:34:1250:0:0:0,-10,-10 0/0:61.517:16:16:596:0:0:0,-4.81648,-10 0/0:40.4449:9:9:339:0:0:0,-2.70927,-10 0/0:61.517:16:16:577:0:0:0,-4.81648,-10 0/0:52.4861:13:13:458:0:0:0,-3.91339,-10 0/0:76.5685:21:21:783:0:0:0,-6.32163,-10 0/0:46.4655:11:11:418:0:0:0,-3.31133,-10 0/0:43.4552:10:10:335:0:0:0,-3.0103,-10 0/0:99:36:36:1284:0:0:0,-10,-10 0/0:49.4758:12:12:456:0:0:0,-3.61236,-10 0/0:58.5067:15:15:569:0:0:0,-4.51545,-10 0/0:40.4449:9:9:338:0:0:0,-2.70927,-10 0/0:55.4964:14:14:522:0:0:0,-4.21442,-10 0/0:34.4243:7:7:253:0:0:0,-2.10721,-10 0/1:99:22:13:494:9:333:-10,0,-10 0/0:61.517:16:16:597:0:0:0,-4.81648,-10 0/0:94.6278:27:27:985:0:0:0,-8.12781,-10 0/1:99:16:7:266:9:337:-10,0,-10 0/0:25.3934:4:4:148:0:0:0,-1.20412,-10 0/0:82.5891:23:23:855:0:0:0,-6.92369,-10 0/0:40.4449:9:9:322:0:0:0,-2.70927,-10 0/0:37.4346:8:8:300:0:0:0,-2.40824,-10 0/0:88.6091:25:25:944:0:0:0,-7.52575,-10 0/0:49.4758:12:12:453:0:0:0,-3.61236,-10 0/0:43.4552:11:10:364:0:0:0,-3.0103,-10 0/0:73.5582:20:20:757:0:0:0,-6.0206,-10 0/0:76.5685:21:21:767:0:0:0,-6.32163,-10 0/0:79.5787:22:22:827:0:0:0,-6.62266,-10 0/0:76.5685:21:21:797:0:0:0,-6.32163,-10 0/0:40.4449:9:9:319:0:0:0,-2.70927,-10 0/0:49.4758:12:12:453:0:0:0,-3.61236,-10 0/0:34.4243:7:7:266:0:0:0,-2.10721,-10 0/0:28.4037:5:5:190:0:0:0,-1.50515,-10 0/0:34.4243:7:7:264:0:0:0,-2.10721,-10 0/0:99:31:31:1153:0:0:0,-9.33193,-10 0/0:67.5376:18:18:656:0:0:0,-5.41854,-10 0/0:73.5582:20:20:731:0:0:0,-6.0206,-10 0/0:49.4758:12:12:450:0:0:0,-3.61236,-10 0/1:99:21:14:527:7:264:-10,0,-10 0/0:16.3625:1:1:38:0:0:0,-0.30103,-3.8 0/0:49.4758:12:12:421:0:0:0,-3.61236,-10 0/0:61.517:16:16:607:0:0:0,-4.81648,-10 0/0:28.4037:5:5:190:0:0:0,-1.50515,-10 0/0:31.414:6:6:228:0:0:0,-1.80618,-10 0/0:58.5067:15:15:564:0:0:0,-4.51545,-10 0/0:64.5273:17:17:611:0:0:0,-5.11751,-10 scaffold_86 2002001 . A ATA 5905.29 . AB=0.559322;ABP=8.42058;AC=19;AF=0.102151;AN=186;AO=228;CIGAR=1M4I1X;DP=1980;DPB=2443;DPRA=1.12925;EPP=10.4771;EPPR=31.3513;GTI=1;LEN=2;MEANALT=1.07692;MQM=54.0307;MQMR=59.9954;NS=93;NUMALT=1;ODDS=0.400515;PAIRED=0;PAIREDR=0;PAO=5;PQA=182.5;PQR=182.5;PRO=5;QA=7976;QR=63710;RO=1747;RPP=498.106;RPPR=3796.57;RUN=1;SAF=128;SAP=10.4771;SAR=100;SRF=949;SRP=31.3513;SRR=798;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 1|1:17.9437:14:0:0:14:522:-10,-4.21442,0 0|0:30.8171:9:9:315:0:0:0,-2.70927,-10 0|1:99:11:7:252:4:129:-10,0,-10 0|0:33.8274:10:10:371:0:0:0,-3.0103,-10 0|0:30.8171:9:9:292:0:0:0,-2.70927,-10 0|0:24.7965:7:7:259:0:0:0,-2.10721,-10 0|0:99:47:47:1692:0:0:0,-10,-10 0|0:81.9921:26:26:958:0:0:0,-7.82678,-10 1|1:42.0261:22:0:0:22:782:-10,-6.62266,0 0|0:15.7656:4:4:150:0:0:0,-1.20412,-10 0|0:36.8377:11:11:384:0:0:0,-3.31133,-10 0|0:21.7862:6:6:228:0:0:0,-1.80618,-10 0|0:88.0129:28:28:973:0:0:0,-8.42884,-10 0|0:99:46:45:1666:0:0:0,-10,-10 0|0:75.9716:24:24:891:0:0:0,-7.22472,-10 0|0:69.951:23:22:792:0:0:0,-6.62266,-10 0|0:72.9613:23:23:841:0:0:0,-6.92369,-10 0|0:39.848:12:12:420:0:0:0,-3.61236,-10 0|0:99:35:35:1252:0:0:0,-10,-10 0|0:99:37:37:1355:0:0:0,-10,-10 0|0:81.9921:26:26:913:0:0:0,-7.82678,-10 0|0:99:43:43:1592:0:0:0,-10,-10 0|0:21.7862:6:6:211:0:0:0,-1.80618,-10 0|0:88.0129:28:28:1037:0:0:0,-8.42884,-10 0|0:57.9098:18:18:656:0:0:0,-5.41854,-10 0|0:88.0129:28:28:1045:0:0:0,-8.42884,-10 0|0:72.9613:23:23:848:0:0:0,-6.92369,-10 0|0:33.8274:10:10:358:0:0:0,-3.0103,-10 0|0:45.8686:14:14:528:0:0:0,-4.21442,-10 0|0:91.0234:29:29:991:0:0:0,-8.72987,-10 0|0:9.74501:2:2:75:0:0:0,-0.60206,-7.125 0|0:24.7965:7:7:249:0:0:0,-2.10721,-10 0|0:94.0314:30:30:1112:0:0:0,-9.0309,-10 0|0:27.8068:8:8:304:0:0:0,-2.40824,-10 0|0:78.9818:25:25:921:0:0:0,-7.52575,-10 0|0:60.9201:19:19:713:0:0:0,-5.71957,-10 0|0:33.8274:10:10:343:0:0:0,-3.0103,-10 0|0:99:33:33:1221:0:0:0,-9.93399,-10 1|1:57.0776:27:0:0:27:933:-10,-8.12781,0 0|0:60.9201:19:19:700:0:0:0,-5.71957,-10 0|0:91.0234:29:29:1057:0:0:0,-8.72987,-10 0|0:88.0129:28:28:1052:0:0:0,-8.42884,-10 1|1:54.0673:26:0:0:26:878:-10,-7.82678,0 0|0:99:43:43:1573:0:0:0,-10,-10 0|0:88.0129:28:28:996:0:0:0,-8.42884,-10 0|0:30.8171:9:9:328:0:0:0,-2.70927,-10 0|0:99:41:41:1511:0:0:0,-10,-10 0|0:99:39:39:1413:0:0:0,-10,-10 0|0:30.8171:9:9:340:0:0:0,-2.70927,-10 0|0:81.9921:26:26:924:0:0:0,-7.82678,-10 0|0:45.8686:14:14:517:0:0:0,-4.21442,-10 0|0:99:34:34:1225:0:0:0,-10,-10 0|0:51.8892:16:16:579:0:0:0,-4.81648,-10 0|0:36.8377:11:11:395:0:0:0,-3.31133,-10 0|0:99:45:45:1643:0:0:0,-10,-10 0|0:54.8995:17:17:613:0:0:0,-5.11751,-10 0|0:45.8686:14:14:528:0:0:0,-4.21442,-10 0|0:15.7656:4:4:102:0:0:0,-1.20412,-9.435 0|0:69.951:23:22:825:0:0:0,-6.62266,-10 0|0:48.8789:15:15:560:0:0:0,-4.51545,-10 0|0:91.0234:29:29:1056:0:0:0,-8.72987,-10 1|1:51.057:26:0:0:25:884:-10,-7.52575,0 0|1:99:49:23:859:26:913:-10,0,-10 0|0:60.9201:19:19:696:0:0:0,-5.71957,-10 0|0:48.8789:15:15:561:0:0:0,-4.51545,-10 0|0:99:32:32:1146:0:0:0,-9.63296,-10 0|0:51.8892:16:16:578:0:0:0,-4.81648,-10 0|0:36.8377:11:11:382:0:0:0,-3.31133,-10 0|1:99:44:20:730:24:806:-10,0,-10 0|0:27.8068:8:8:291:0:0:0,-2.40824,-10 0|0:69.951:23:22:818:0:0:0,-6.62266,-10 0|0:94.0314:30:30:1114:0:0:0,-9.0309,-10 0|0:75.9716:24:24:884:0:0:0,-7.22472,-10 0|0:69.951:22:22:829:0:0:0,-6.62266,-10 0|0:99:40:40:1440:0:0:0,-10,-10 0|0:48.8789:15:15:553:0:0:0,-4.51545,-10 0|0:48.8789:15:15:559:0:0:0,-4.51545,-10 0|0:42.8583:13:13:479:0:0:0,-3.91339,-10 0|0:15.7656:4:4:130:0:0:0,-1.20412,-10 0|0:51.8892:16:16:585:0:0:0,-4.81648,-10 0|0:99:44:44:1582:0:0:0,-10,-10 0|1:99:33:10:354:23:774:-10,0,-10 0|0:78.9818:25:25:924:0:0:0,-7.52575,-10 0|1:99:22:12:456:10:372:-10,0,-10 0|0:94.0314:30:30:1120:0:0:0,-9.0309,-10 0|0:21.7862:6:6:227:0:0:0,-1.80618,-10 0|0:63.9304:20:20:736:0:0:0,-6.0206,-10 0|0:39.848:12:12:426:0:0:0,-3.61236,-10 0|1:28.57:7:6:212:1:36:-2.33789,0,-10 1|1:20.954:15:0:0:15:545:-10,-4.51545,0 0|0:72.9613:23:23:856:0:0:0,-6.92369,-10 0|1:1.06341:11:0:0:11:402:-10,-3.31133,0 scaffold_86 2002002 . G GCA 5905.29 . AB=0.559322;ABP=8.42058;AC=19;AF=0.102151;AN=186;AO=228;CIGAR=1M4I1X;DP=1980;DPB=2443;DPRA=1.12925;EPP=10.4771;EPPR=31.3513;GTI=1;LEN=2;MEANALT=1.07692;MQM=54.0307;MQMR=59.9954;NS=93;NUMALT=1;ODDS=0.400515;PAIRED=0;PAIREDR=0;PAO=5;PQA=182.5;PQR=182.5;PRO=5;QA=7976;QR=63710;RO=1747;RPP=498.106;RPPR=3796.57;RUN=1;SAF=128;SAP=10.4771;SAR=100;SRF=949;SRP=31.3513;SRR=798;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 1|1:17.9437:14:0:0:14:522:-10,-4.21442,0 0|0:30.8171:9:9:315:0:0:0,-2.70927,-10 0|1:99:11:7:252:4:129:-10,0,-10 0|0:33.8274:10:10:371:0:0:0,-3.0103,-10 0|0:30.8171:9:9:292:0:0:0,-2.70927,-10 0|0:24.7965:7:7:259:0:0:0,-2.10721,-10 0|0:99:47:47:1692:0:0:0,-10,-10 0|0:81.9921:26:26:958:0:0:0,-7.82678,-10 1|1:42.0261:22:0:0:22:782:-10,-6.62266,0 0|0:15.7656:4:4:150:0:0:0,-1.20412,-10 0|0:36.8377:11:11:384:0:0:0,-3.31133,-10 0|0:21.7862:6:6:228:0:0:0,-1.80618,-10 0|0:88.0129:28:28:973:0:0:0,-8.42884,-10 0|0:99:46:45:1666:0:0:0,-10,-10 0|0:75.9716:24:24:891:0:0:0,-7.22472,-10 0|0:69.951:23:22:792:0:0:0,-6.62266,-10 0|0:72.9613:23:23:841:0:0:0,-6.92369,-10 0|0:39.848:12:12:420:0:0:0,-3.61236,-10 0|0:99:35:35:1252:0:0:0,-10,-10 0|0:99:37:37:1355:0:0:0,-10,-10 0|0:81.9921:26:26:913:0:0:0,-7.82678,-10 0|0:99:43:43:1592:0:0:0,-10,-10 0|0:21.7862:6:6:211:0:0:0,-1.80618,-10 0|0:88.0129:28:28:1037:0:0:0,-8.42884,-10 0|0:57.9098:18:18:656:0:0:0,-5.41854,-10 0|0:88.0129:28:28:1045:0:0:0,-8.42884,-10 0|0:72.9613:23:23:848:0:0:0,-6.92369,-10 0|0:33.8274:10:10:358:0:0:0,-3.0103,-10 0|0:45.8686:14:14:528:0:0:0,-4.21442,-10 0|0:91.0234:29:29:991:0:0:0,-8.72987,-10 0|0:9.74501:2:2:75:0:0:0,-0.60206,-7.125 0|0:24.7965:7:7:249:0:0:0,-2.10721,-10 0|0:94.0314:30:30:1112:0:0:0,-9.0309,-10 0|0:27.8068:8:8:304:0:0:0,-2.40824,-10 0|0:78.9818:25:25:921:0:0:0,-7.52575,-10 0|0:60.9201:19:19:713:0:0:0,-5.71957,-10 0|0:33.8274:10:10:343:0:0:0,-3.0103,-10 0|0:99:33:33:1221:0:0:0,-9.93399,-10 1|1:57.0776:27:0:0:27:933:-10,-8.12781,0 0|0:60.9201:19:19:700:0:0:0,-5.71957,-10 0|0:91.0234:29:29:1057:0:0:0,-8.72987,-10 0|0:88.0129:28:28:1052:0:0:0,-8.42884,-10 1|1:54.0673:26:0:0:26:878:-10,-7.82678,0 0|0:99:43:43:1573:0:0:0,-10,-10 0|0:88.0129:28:28:996:0:0:0,-8.42884,-10 0|0:30.8171:9:9:328:0:0:0,-2.70927,-10 0|0:99:41:41:1511:0:0:0,-10,-10 0|0:99:39:39:1413:0:0:0,-10,-10 0|0:30.8171:9:9:340:0:0:0,-2.70927,-10 0|0:81.9921:26:26:924:0:0:0,-7.82678,-10 0|0:45.8686:14:14:517:0:0:0,-4.21442,-10 0|0:99:34:34:1225:0:0:0,-10,-10 0|0:51.8892:16:16:579:0:0:0,-4.81648,-10 0|0:36.8377:11:11:395:0:0:0,-3.31133,-10 0|0:99:45:45:1643:0:0:0,-10,-10 0|0:54.8995:17:17:613:0:0:0,-5.11751,-10 0|0:45.8686:14:14:528:0:0:0,-4.21442,-10 0|0:15.7656:4:4:102:0:0:0,-1.20412,-9.435 0|0:69.951:23:22:825:0:0:0,-6.62266,-10 0|0:48.8789:15:15:560:0:0:0,-4.51545,-10 0|0:91.0234:29:29:1056:0:0:0,-8.72987,-10 1|1:51.057:26:0:0:25:884:-10,-7.52575,0 0|1:99:49:23:859:26:913:-10,0,-10 0|0:60.9201:19:19:696:0:0:0,-5.71957,-10 0|0:48.8789:15:15:561:0:0:0,-4.51545,-10 0|0:99:32:32:1146:0:0:0,-9.63296,-10 0|0:51.8892:16:16:578:0:0:0,-4.81648,-10 0|0:36.8377:11:11:382:0:0:0,-3.31133,-10 0|1:99:44:20:730:24:806:-10,0,-10 0|0:27.8068:8:8:291:0:0:0,-2.40824,-10 0|0:69.951:23:22:818:0:0:0,-6.62266,-10 0|0:94.0314:30:30:1114:0:0:0,-9.0309,-10 0|0:75.9716:24:24:884:0:0:0,-7.22472,-10 0|0:69.951:22:22:829:0:0:0,-6.62266,-10 0|0:99:40:40:1440:0:0:0,-10,-10 0|0:48.8789:15:15:553:0:0:0,-4.51545,-10 0|0:48.8789:15:15:559:0:0:0,-4.51545,-10 0|0:42.8583:13:13:479:0:0:0,-3.91339,-10 0|0:15.7656:4:4:130:0:0:0,-1.20412,-10 0|0:51.8892:16:16:585:0:0:0,-4.81648,-10 0|0:99:44:44:1582:0:0:0,-10,-10 0|1:99:33:10:354:23:774:-10,0,-10 0|0:78.9818:25:25:924:0:0:0,-7.52575,-10 0|1:99:22:12:456:10:372:-10,0,-10 0|0:94.0314:30:30:1120:0:0:0,-9.0309,-10 0|0:21.7862:6:6:227:0:0:0,-1.80618,-10 0|0:63.9304:20:20:736:0:0:0,-6.0206,-10 0|0:39.848:12:12:426:0:0:0,-3.61236,-10 0|1:28.57:7:6:212:1:36:-2.33789,0,-10 1|1:20.954:15:0:0:15:545:-10,-4.51545,0 0|0:72.9613:23:23:856:0:0:0,-6.92369,-10 0|1:1.06341:11:0:0:11:402:-10,-3.31133,0 scaffold_86 2036443 . G A 367.401 . AB=0.461538;ABP=3.51141;AC=3;AF=0.0164835;AN=182;AO=18;CIGAR=1X;DP=2674;DPB=2674;DPRA=0.434156;EPP=3.49285;EPPR=7.48733;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=26.5403;NS=91;NUMALT=1;ODDS=2.09153;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=679;QR=97561;RO=2656;RPP=42.0968;RPPR=4822.75;RUN=1;SAF=10;SAP=3.49285;SAR=8;SRF=1345;SRP=3.95541;SRR=1311;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:27:27:975:0:0:0,-8.12781,-10 0/0:99:18:18:618:0:0:0,-5.41854,-10 0/0:99:32:32:1194:0:0:0,-9.63296,-10 0/0:99:29:29:1057:0:0:0,-8.72987,-10 0/0:99:22:22:795:0:0:0,-6.62266,-10 0/1:4.72577e-09:6:0:0:6:228:-10,-1.80618,0 0/0:99:80:80:2921:0:0:0,-10,-10 0/0:99:31:31:1109:0:0:0,-9.33193,-10 0/0:99:23:23:865:0:0:0,-6.92369,-10 0/1:2.95361e-10:2:0:0:2:76:-7.22,-0.60206,0 .:.:.:.:.:.:.:. 0/0:96.6371:11:11:409:0:0:0,-3.31133,-10 0/0:99:54:54:1970:0:0:0,-10,-10 0/1:99:31:21:763:10:375:-10,0,-10 0/0:99:47:47:1707:0:0:0,-10,-10 0/0:99:43:43:1570:0:0:0,-10,-10 0/0:99:38:38:1393:0:0:0,-10,-10 0/0:99:17:17:641:0:0:0,-5.11751,-10 0/0:99:23:23:839:0:0:0,-6.92369,-10 0/0:99:61:61:2198:0:0:0,-10,-10 0/0:99:19:19:700:0:0:0,-5.71957,-10 0/0:99:50:50:1862:0:0:0,-10,-10 0/0:99:23:23:867:0:0:0,-6.92369,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:99:40:40:1438:0:0:0,-10,-10 0/0:99:41:41:1530:0:0:0,-10,-10 0/0:99:25:25:903:0:0:0,-7.52575,-10 0/0:99:27:27:975:0:0:0,-8.12781,-10 0/0:99:39:39:1408:0:0:0,-10,-10 0/0:81.5899:6:6:225:0:0:0,-1.80618,-10 0/0:72.559:3:3:91:0:0:0,-0.90309,-8.49333 0/0:99:19:19:698:0:0:0,-5.71957,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:99:30:30:1117:0:0:0,-9.0309,-10 0/0:99:16:16:603:0:0:0,-4.81648,-10 0/0:99:15:15:535:0:0:0,-4.51545,-10 0/0:99:45:45:1653:0:0:0,-10,-10 0/0:99:23:23:839:0:0:0,-6.92369,-10 0/0:99:20:20:737:0:0:0,-6.0206,-10 0/0:99:48:48:1784:0:0:0,-10,-10 0/0:99:32:32:1196:0:0:0,-9.63296,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:99:42:42:1530:0:0:0,-10,-10 0/0:99:24:24:834:0:0:0,-7.22472,-10 0/0:99:27:27:1016:0:0:0,-8.12781,-10 0/0:99:84:84:3153:0:0:0,-10,-10 0/0:99:47:47:1739:0:0:0,-10,-10 0/0:99:16:16:608:0:0:0,-4.81648,-10 0/0:99:44:44:1587:0:0:0,-10,-10 0/0:99:15:15:564:0:0:0,-4.51545,-10 0/0:99:61:61:2199:0:0:0,-10,-10 0/0:99:21:21:775:0:0:0,-6.32163,-10 0/0:99:17:17:624:0:0:0,-5.11751,-10 0/0:99:50:50:1839:0:0:0,-10,-10 0/0:99:17:17:619:0:0:0,-5.11751,-10 0/0:99:28:28:1034:0:0:0,-8.42884,-10 0/0:99:13:13:428:0:0:0,-3.91339,-10 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:99:17:17:632:0:0:0,-5.11751,-10 0/0:99:54:54:2017:0:0:0,-10,-10 0/0:99:19:19:700:0:0:0,-5.71957,-10 0/0:99:71:71:2622:0:0:0,-10,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:99:31:31:1120:0:0:0,-9.33193,-10 0/0:99:46:46:1666:0:0:0,-10,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:99:12:12:450:0:0:0,-3.61236,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:99:14:14:524:0:0:0,-4.21442,-10 0/0:99:17:17:606:0:0:0,-5.11751,-10 0/0:99:36:36:1313:0:0:0,-10,-10 0/0:99:36:36:1263:0:0:0,-10,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:99:35:35:1319:0:0:0,-10,-10 0/0:99:20:20:745:0:0:0,-6.0206,-10 0/0:99:16:16:570:0:0:0,-4.81648,-10 0/0:99:18:18:671:0:0:0,-5.41854,-10 0/0:78.5796:5:5:188:0:0:0,-1.50515,-10 0/0:99:19:19:673:0:0:0,-5.71957,-10 0/0:99:51:51:1856:0:0:0,-10,-10 0/0:99:40:40:1480:0:0:0,-10,-10 0/0:99:31:31:1177:0:0:0,-9.33193,-10 0/0:99:15:15:552:0:0:0,-4.51545,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:99:18:18:648:0:0:0,-5.41854,-10 0/0:99:26:26:986:0:0:0,-7.82678,-10 0/0:99:25:25:918:0:0:0,-7.52575,-10 0/0:99:13:13:476:0:0:0,-3.91339,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:99:39:39:1465:0:0:0,-10,-10 0/0:99:19:19:698:0:0:0,-5.71957,-10 scaffold_86 2242474 . C G 242.559 . AB=0.526316;ABP=3.12459;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1671;DPB=1671;DPRA=1.50278;EPP=4.78696;EPPR=18.8385;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9904;NS=92;NUMALT=1;ODDS=8.7657;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=394;QR=59823;RO=1660;RPP=26.8965;RPPR=3419.1;RUN=1;SAF=7;SAP=4.78696;SAR=4;SRF=865;SRP=9.42007;SRR=795;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.1627:10:10:322:0:0:0,-3.0103,-10 0/0:68.173:11:11:404:0:0:0,-3.31133,-10 0/0:77.2038:14:14:525:0:0:0,-4.21442,-10 0/0:53.1215:6:6:201:0:0:0,-1.80618,-10 0/0:74.1936:13:13:450:0:0:0,-3.91339,-10 0/0:65.1627:10:10:358:0:0:0,-3.0103,-10 0/0:99:43:43:1561:0:0:0,-10,-10 0/0:99:26:26:926:0:0:0,-7.82678,-10 0/0:77.2038:14:14:494:0:0:0,-4.21442,-10 0/0:38.07:1:1:36:0:0:0,-0.30103,-3.6 0/0:59.1421:8:8:282:0:0:0,-2.40824,-10 0/0:59.1421:8:8:294:0:0:0,-2.40824,-10 0/0:99:30:30:1048:0:0:0,-9.0309,-10 0/0:99:29:29:1055:0:0:0,-8.72987,-10 0/0:99:23:23:826:0:0:0,-6.92369,-10 0/0:98.2693:21:21:775:0:0:0,-6.32163,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:62.1524:9:9:312:0:0:0,-2.70927,-10 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:99:32:32:1153:0:0:0,-9.63296,-10 0/0:99:22:22:804:0:0:0,-6.62266,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:53.1215:6:6:206:0:0:0,-1.80618,-10 0/0:68.173:11:11:376:0:0:0,-3.31133,-10 0/0:98.2693:21:21:762:0:0:0,-6.32163,-10 0/0:99:26:26:931:0:0:0,-7.82678,-10 0/0:92.2554:19:19:715:0:0:0,-5.71957,-10 0/0:77.2038:14:14:525:0:0:0,-4.21442,-10 0/0:99:26:26:937:0:0:0,-7.82678,-10 0/0:99:31:31:1099:0:0:0,-9.33193,-10 0/0:50.1112:5:5:187:0:0:0,-1.50515,-10 0/0:86.2344:17:17:631:0:0:0,-5.11751,-10 0/0:74.1936:13:13:491:0:0:0,-3.91339,-10 0/0:86.2344:17:17:598:0:0:0,-5.11751,-10 0/0:98.2693:21:21:748:0:0:0,-6.32163,-10 0/0:50.1112:5:5:185:0:0:0,-1.50515,-10 0/0:56.1318:7:7:263:0:0:0,-2.10721,-10 0/0:99:29:29:1054:0:0:0,-8.72987,-10 0/0:83.2243:16:16:554:0:0:0,-4.81648,-10 0/0:95.2623:20:20:712:0:0:0,-6.0206,-10 0/0:99:24:24:869:0:0:0,-7.22472,-10 0/0:95.2623:20:20:739:0:0:0,-6.0206,-10 0/0:71.1833:12:12:409:0:0:0,-3.61236,-10 0/0:99:29:29:1017:0:0:0,-8.72987,-10 0/0:71.1833:12:12:442:0:0:0,-3.61236,-10 0/0:74.1936:13:13:464:0:0:0,-3.91339,-10 0/0:99:52:52:1897:0:0:0,-10,-10 0/0:83.2243:16:16:604:0:0:0,-4.81648,-10 0/0:92.2554:19:19:712:0:0:0,-5.71957,-10 0/0:99:29:29:1018:0:0:0,-8.72987,-10 0/0:74.1936:13:13:490:0:0:0,-3.91339,-10 0/0:99:34:34:1228:0:0:0,-10,-10 0/0:77.2038:14:14:501:0:0:0,-4.21442,-10 0/0:56.1318:7:7:266:0:0:0,-2.10721,-10 0/0:99:37:37:1359:0:0:0,-10,-10 0/0:71.1833:12:12:413:0:0:0,-3.61236,-10 0/0:74.1936:13:13:476:0:0:0,-3.91339,-10 0/0:62.1524:9:9:274:0:0:0,-2.70927,-10 0/0:80.2141:15:15:531:0:0:0,-4.51545,-10 0/0:56.1318:7:7:258:0:0:0,-2.10721,-10 0/0:99:23:23:827:0:0:0,-6.92369,-10 0/0:77.2038:14:14:528:0:0:0,-4.21442,-10 0/0:99:33:33:1185:0:0:0,-9.93399,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:83.2243:16:16:547:0:0:0,-4.81648,-10 0/0:99:23:23:819:0:0:0,-6.92369,-10 0/0:89.2442:18:18:654:0:0:0,-5.41854,-10 0/0:59.1421:8:8:277:0:0:0,-2.40824,-10 0/0:99:35:34:1195:1:14:0,-7.59198,-10 0/0:56.1318:7:7:264:0:0:0,-2.10721,-10 0/0:95.2623:20:20:644:0:0:0,-6.0206,-10 0/0:99:27:27:959:0:0:0,-8.12781,-10 0/0:99:27:27:964:0:0:0,-8.12781,-10 0/0:86.2344:17:17:580:0:0:0,-5.11751,-10 0/0:99:24:24:901:0:0:0,-7.22472,-10 0/0:71.1833:12:12:450:0:0:0,-3.61236,-10 0/0:68.173:11:11:397:0:0:0,-3.31133,-10 0/0:59.1421:8:8:293:0:0:0,-2.40824,-10 0/0:47.1009:4:4:152:0:0:0,-1.20412,-10 0/0:80.2141:15:15:508:0:0:0,-4.51545,-10 0/0:99:33:33:1185:0:0:0,-9.93399,-10 0/0:99:29:29:1096:0:0:0,-8.72987,-10 0/1:99:19:9:336:10:380:-10,0,-10 0/0:99:22:22:803:0:0:0,-6.62266,-10 0/0:99:23:23:830:0:0:0,-6.92369,-10 0/0:56.1318:7:7:266:0:0:0,-2.10721,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/0:62.1524:9:9:315:0:0:0,-2.70927,-10 0/0:50.1112:5:5:183:0:0:0,-1.50515,-10 0/0:83.2243:16:16:582:0:0:0,-4.81648,-10 0/0:62.1524:9:9:294:0:0:0,-2.70927,-10 0/0:77.2038:14:14:515:0:0:0,-4.21442,-10 scaffold_86 2534677 . C A 593.198 . AB=0.694444;ABP=14.8328;AC=2;AF=0.0108696;AN=184;AO=27;CIGAR=1X;DP=1896;DPB=1896;DPRA=0.931281;EPP=5.02092;EPPR=6.40366;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.962;NS=92;NUMALT=1;ODDS=6.05813;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=948;QR=67074;RO=1866;RPP=61.6401;RPPR=4028.96;RUN=1;SAF=16;SAP=5.02092;SAR=11;SRF=909;SRP=5.69147;SRR=957;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:95.5587:24:24:861:0:0:0,-7.22472,-10 0/0:65.4566:14:14:531:0:0:0,-4.21442,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:53.4154:10:10:357:0:0:0,-3.0103,-10 0/0:89.5388:22:22:768:0:0:0,-6.62266,-10 0/0:59.436:12:12:410:0:0:0,-3.61236,-10 0/0:99:35:34:1238:0:0:0,-10,-10 0/0:99:39:39:1391:0:0:0,-10,-10 0/0:68.4669:15:15:542:0:0:0,-4.51545,-10 0/0:26.3227:1:1:34:0:0:0,-0.30103,-3.4 0/0:47.3948:8:8:303:0:0:0,-2.40824,-10 0/0:47.3948:8:8:278:0:0:0,-2.40824,-10 0/0:99:31:31:1091:0:0:0,-9.33193,-10 0/0:99:34:34:1221:0:0:0,-10,-10 0/0:99:38:38:1366:0:0:0,-10,-10 0/0:99:28:28:1023:0:0:0,-8.42884,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:71.4772:16:16:550:0:0:0,-4.81648,-10 0/0:68.4669:15:15:526:0:0:0,-4.51545,-10 0/0:99:40:40:1412:0:0:0,-10,-10 0/0:53.0164:18:17:616:1:16:0,-2.56327,-10 0/0:99:32:32:1129:0:0:0,-9.63296,-10 0/0:56.4257:11:11:408:0:0:0,-3.31133,-10 0/0:99:29:29:1031:0:0:0,-8.72987,-10 0/0:56.4257:11:11:413:0:0:0,-3.31133,-10 0/0:89.5388:22:22:756:0:0:0,-6.62266,-10 0/0:80.5081:19:19:670:0:0:0,-5.71957,-10 0/0:59.436:12:12:425:0:0:0,-3.61236,-10 0/0:99:30:30:1075:0:0:0,-9.0309,-10 0/0:99:38:38:1347:0:0:0,-10,-10 0/0:50.4051:9:9:333:0:0:0,-2.70927,-10 0/0:44.3845:7:7:239:0:0:0,-2.10721,-10 0/0:83.5181:20:20:728:0:0:0,-6.0206,-10 0/0:74.4875:17:17:602:0:0:0,-5.11751,-10 0/0:77.4978:18:18:650:0:0:0,-5.41854,-10 0/0:44.3845:7:7:255:0:0:0,-2.10721,-10 0/0:56.4257:11:11:401:0:0:0,-3.31133,-10 0/0:99:43:42:1527:0:0:0,-10,-10 0/0:77.4978:18:18:654:0:0:0,-5.41854,-10 0/0:65.4566:14:14:507:0:0:0,-4.21442,-10 0/0:99:28:28:1021:0:0:0,-8.42884,-10 0/0:89.5388:22:22:755:0:0:0,-6.62266,-10 0/0:77.4978:18:18:663:0:0:0,-5.41854,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:99:29:28:1034:0:0:0,-8.42884,-10 0/0:92.5488:23:23:828:0:0:0,-6.92369,-10 0/0:99:45:45:1592:0:0:0,-10,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:62.4463:13:13:462:0:0:0,-3.91339,-10 0/0:99:37:37:1257:0:0:0,-10,-10 0/0:83.5181:20:20:738:0:0:0,-6.0206,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:83.5181:20:20:692:0:0:0,-6.0206,-10 0/0:50.4051:9:9:313:0:0:0,-2.70927,-10 0/0:99:37:37:1369:0:0:0,-10,-10 0/0:62.4463:13:13:489:0:0:0,-3.91339,-10 0/0:77.4978:18:18:682:0:0:0,-5.41854,-10 0/0:62.4463:13:13:482:0:0:0,-3.91339,-10 0/0:50.4051:9:9:322:0:0:0,-2.70927,-10 0/0:50.4051:9:9:337:0:0:0,-2.70927,-10 0/1:99:25:11:416:14:489:-10,0,-10 0/0:59.436:12:12:446:0:0:0,-3.61236,-10 0/0:98.568:25:25:903:0:0:0,-7.52575,-10 0/0:77.4978:18:18:669:0:0:0,-5.41854,-10 0/0:41.3742:6:6:203:0:0:0,-1.80618,-10 0/0:92.5488:23:23:806:0:0:0,-6.92369,-10 0/0:71.4772:16:16:565:0:0:0,-4.81648,-10 0/1:0.000377823:11:0:0:11:405:-10,-3.31133,0 0/0:99:28:28:985:0:0:0,-8.42884,-10 0/0:80.5081:19:19:689:0:0:0,-5.71957,-10 0/0:89.5388:22:22:784:0:0:0,-6.62266,-10 0/0:89.5388:22:22:823:0:0:0,-6.62266,-10 0/0:99:31:31:1116:0:0:0,-9.33193,-10 0/0:68.4669:15:15:482:0:0:0,-4.51545,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:44.3845:7:7:233:0:0:0,-2.10721,-10 0/0:83.5181:20:20:689:0:0:0,-6.0206,-10 0/0:68.4669:15:15:567:0:0:0,-4.51545,-10 0/0:47.3948:8:8:272:0:0:0,-2.40824,-10 0/0:62.4463:13:13:459:0:0:0,-3.91339,-10 0/0:99:31:31:1159:0:0:0,-9.33193,-10 0/0:99:29:29:1011:0:0:0,-8.72987,-10 0/0:71.4772:16:16:583:0:0:0,-4.81648,-10 0/0:62.4463:13:13:493:0:0:0,-3.91339,-10 0/0:99:31:31:1164:0:0:0,-9.33193,-10 0/0:44.3845:7:7:236:0:0:0,-2.10721,-10 0/0:62.4463:13:13:483:0:0:0,-3.91339,-10 0/0:41.7488:23:22:808:1:38:0,-1.76196,-10 0/0:41.3742:6:6:224:0:0:0,-1.80618,-10 0/0:99:26:26:900:0:0:0,-7.82678,-10 0/0:89.5388:22:22:754:0:0:0,-6.62266,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 scaffold_86 2629206 . C T 1362.08 . AB=0.489796;ABP=3.05462;AC=6;AF=0.0326087;AN=184;AO=52;CIGAR=1X;DP=1425;DPB=1425;DPRA=0.993917;EPP=4.51363;EPPR=3.20195;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9847;NS=92;NUMALT=1;ODDS=4.23073;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1947;QR=50291;RO=1371;RPP=115.927;RPPR=2980.1;RUN=1;SAF=29;SAP=4.51363;SAR=23;SRF=680;SRP=3.20195;SRR=691;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.6949:15:15:563:0:0:0,-4.51545,-10 0/0:27.5816:4:4:130:0:0:0,-1.20412,-10 0/0:69.7258:18:18:651:0:0:0,-5.41854,-10 0/0:39.6228:8:8:268:0:0:0,-2.40824,-10 0/0:39.6228:8:8:300:0:0:0,-2.40824,-10 0/0:33.6022:6:6:219:0:0:0,-1.80618,-10 1/1:35.1925:28:0:0:28:1044:-10,-8.42884,0 0/0:81.7669:22:22:828:0:0:0,-6.62266,-10 0/0:48.6537:11:11:374:0:0:0,-3.31133,-10 0/0:30.5919:5:5:186:0:0:0,-1.50515,-10 0/0:24.5713:3:3:114:0:0:0,-0.90309,-10 0/0:36.6125:7:7:264:0:0:0,-2.10721,-10 0/0:81.7669:22:22:798:0:0:0,-6.62266,-10 0/0:78.7566:21:21:774:0:0:0,-6.32163,-10 0/0:66.7155:17:17:617:0:0:0,-5.11751,-10 0/0:51.664:12:12:449:0:0:0,-3.61236,-10 0/1:99:18:9:341:9:335:-10,0,-10 0/0:33.6022:6:6:227:0:0:0,-1.80618,-10 0/0:66.7155:17:17:597:0:0:0,-5.11751,-10 0/0:99:31:31:1116:0:0:0,-9.33193,-10 0/0:54.6743:13:13:469:0:0:0,-3.91339,-10 0/0:90.7974:25:25:923:0:0:0,-7.52575,-10 0/0:39.6228:8:8:295:0:0:0,-2.40824,-10 0/0:51.664:12:12:455:0:0:0,-3.61236,-10 0/0:60.6949:15:15:544:0:0:0,-4.51545,-10 0/0:84.7772:23:23:847:0:0:0,-6.92369,-10 0/0:66.7155:17:17:611:0:0:0,-5.11751,-10 0/0:54.6743:13:13:489:0:0:0,-3.91339,-10 0/0:63.7052:16:16:602:0:0:0,-4.81648,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:45.6434:10:10:367:0:0:0,-3.0103,-10 0/0:39.6228:8:8:250:0:0:0,-2.40824,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:45.6434:10:10:345:0:0:0,-3.0103,-10 0/0:66.7155:17:17:632:0:0:0,-5.11751,-10 0/0:27.5816:4:4:149:0:0:0,-1.20412,-10 0/0:60.6949:15:15:540:0:0:0,-4.51545,-10 0/0:69.7258:18:18:676:0:0:0,-5.41854,-10 0/0:54.6743:13:13:472:0:0:0,-3.91339,-10 0/0:51.664:12:12:398:0:0:0,-3.61236,-10 0/0:90.7974:25:25:936:0:0:0,-7.52575,-10 0/0:81.7669:22:22:796:0:0:0,-6.62266,-10 0/0:66.7155:17:17:635:0:0:0,-5.11751,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:66.7155:17:17:641:0:0:0,-5.11751,-10 0/0:54.6743:13:13:491:0:0:0,-3.91339,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:63.7052:16:16:602:0:0:0,-4.81648,-10 0/0:48.6537:11:11:407:0:0:0,-3.31133,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/0:54.6743:13:13:486:0:0:0,-3.91339,-10 0/0:99:32:32:1172:0:0:0,-9.63296,-10 0/0:39.6228:8:8:304:0:0:0,-2.40824,-10 0/0:18.5507:1:1:38:0:0:0,-0.30103,-3.8 0/0:99:34:34:1275:0:0:0,-10,-10 0/0:51.664:12:12:431:0:0:0,-3.61236,-10 0/0:48.6537:11:11:381:0:0:0,-3.31133,-10 0/0:24.5713:3:3:113:0:0:0,-0.90309,-10 0/0:72.7361:19:19:680:0:0:0,-5.71957,-10 0/0:39.6228:8:8:302:0:0:0,-2.40824,-10 0/0:63.7052:16:16:581:0:0:0,-4.81648,-10 0/0:36.6125:7:7:259:0:0:0,-2.10721,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:48.6537:11:11:392:0:0:0,-3.31133,-10 0/0:51.664:12:12:429:0:0:0,-3.61236,-10 0/1:99:18:9:293:8:303:-10,0,-10 0/1:99:11:5:186:6:227:-10,0,-10 0/0:42.6331:9:9:312:0:0:0,-2.70927,-10 0/0:78.7566:21:21:773:0:0:0,-6.32163,-10 0/0:45.6434:10:10:379:0:0:0,-3.0103,-10 0/0:66.7155:17:17:630:0:0:0,-5.11751,-10 0/0:99:28:28:1049:0:0:0,-8.42884,-10 0/0:75.7464:20:20:743:0:0:0,-6.0206,-10 0/0:66.7155:17:17:645:0:0:0,-5.11751,-10 0/0:57.6846:14:14:498:0:0:0,-4.21442,-10 0/0:51.664:12:12:443:0:0:0,-3.61236,-10 0/0:39.6228:8:8:292:0:0:0,-2.40824,-10 0/0:39.6228:8:8:295:0:0:0,-2.40824,-10 0/0:24.5713:3:3:114:0:0:0,-0.90309,-10 0/0:51.664:12:12:448:0:0:0,-3.61236,-10 0/0:75.7464:20:20:755:0:0:0,-6.0206,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:78.7566:21:21:796:0:0:0,-6.32163,-10 0/0:81.7669:22:22:819:0:0:0,-6.62266,-10 0/0:69.7258:19:18:646:0:0:0,-5.41854,-10 0/0:30.5919:5:5:164:0:0:0,-1.50515,-10 0/0:75.7464:20:20:724:0:0:0,-6.0206,-10 0/0:63.7052:16:16:592:0:0:0,-4.81648,-10 0/1:21.2661:2:1:38:1:38:-3.49897,0,-3.49897 0/0:48.6537:11:11:405:0:0:0,-3.31133,-10 0/0:57.6846:14:14:504:0:0:0,-4.21442,-10 0/0:60.6949:15:15:562:0:0:0,-4.51545,-10 scaffold_86 2968476 . A G 4416.69 . AB=0.63964;ABP=21.8102;AC=22;AF=0.119565;AN=184;AO=167;CIGAR=1X;DP=1257;DPB=1257;DPRA=0.936429;EPP=4.06353;EPPR=3.45978;GTI=4;LEN=1;MEANALT=1;MQM=59.988;MQMR=59.8822;NS=92;NUMALT=1;ODDS=0.538693;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6116;QR=39460;RO=1087;RPP=365.646;RPPR=2234.91;RUN=1;SAF=88;SAP=4.06353;SAR=79;SRF=536;SRP=3.45978;SRR=551;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.9237:12:12:427:0:0:0,-3.61236,-10 0/1:0.00506375:2:0:0:2:76:-7.22,-0.60206,0 0/1:99:11:5:168:6:202:-10,0,-10 0/0:38.9031:10:10:365:0:0:0,-3.0103,-10 0/0:38.9031:10:10:348:0:0:0,-3.0103,-10 0/0:26.8619:6:6:218:0:0:0,-1.80618,-10 0/0:62.9855:18:18:680:0:0:0,-5.41854,-10 0/0:35.8928:9:9:320:0:0:0,-2.70927,-10 1/1:8.37544:11:0:0:11:394:-10,-3.31133,0 0/0:17.831:3:3:110:0:0:0,-0.90309,-10 0/0:17.831:3:3:114:0:0:0,-0.90309,-10 0/0:11.8104:1:1:35:0:0:0,-0.30103,-3.5 0/0:96.0993:29:29:1090:0:0:0,-8.72987,-10 0/0:53.9546:15:15:566:0:0:0,-4.51545,-10 0/0:62.9855:18:18:631:0:0:0,-5.41854,-10 0/0:56.9649:16:16:589:0:0:0,-4.81648,-10 0/0:59.9752:17:17:619:0:0:0,-5.11751,-10 0/0:20.8413:4:4:152:0:0:0,-1.20412,-10 0/0:50.9443:14:14:508:0:0:0,-4.21442,-10 0/0:90.0778:27:27:1005:0:0:0,-8.12781,-10 0/1:99:15:8:288:7:233:-10,0,-10 0/0:59.9752:18:17:623:0:0:0,-5.11751,-10 0/0:23.8516:5:5:179:0:0:0,-1.50515,-10 0/0:41.9134:11:11:410:0:0:0,-3.31133,-10 0/0:65.9958:19:19:659:0:0:0,-5.71957,-10 0/0:56.9649:16:16:590:0:0:0,-4.81648,-10 0/0:56.9649:16:16:600:0:0:0,-4.81648,-10 0/0:23.8516:5:5:164:0:0:0,-1.50515,-10 0/0:65.9958:19:19:701:0:0:0,-5.71957,-10 0/0:84.0575:25:25:872:0:0:0,-7.52575,-10 0/0:38.9031:10:10:343:0:0:0,-3.0103,-10 0/0:29.8722:7:7:263:0:0:0,-2.10721,-10 0/0:69.0061:20:20:718:0:0:0,-6.0206,-10 0/0:35.8928:9:9:321:0:0:0,-2.70927,-10 0/0:62.9855:18:18:615:0:0:0,-5.41854,-10 0/0:23.8516:5:5:178:0:0:0,-1.50515,-10 0/0:23.8516:5:5:188:0:0:0,-1.50515,-10 0/1:99:19:8:271:11:388:-10,0,-10 0/0:35.8928:9:9:329:0:0:0,-2.70927,-10 0/0:47.934:13:13:469:0:0:0,-3.91339,-10 0/0:53.9546:15:15:554:0:0:0,-4.51545,-10 0/0:53.9546:15:15:523:0:0:0,-4.51545,-10 0/0:47.934:13:13:454:0:0:0,-3.91339,-10 0/0:78.037:23:23:853:0:0:0,-6.92369,-10 0/0:53.9546:15:15:556:0:0:0,-4.51545,-10 0/0:50.9443:14:14:525:0:0:0,-4.21442,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:62.9855:18:18:657:0:0:0,-5.41854,-10 0/0:44.9237:12:12:432:0:0:0,-3.61236,-10 0/0:99:31:31:1085:0:0:0,-9.33193,-10 0/0:41.9134:11:11:392:0:0:0,-3.31133,-10 0/0:81.0472:25:24:889:0:0:0,-7.22472,-10 0/0:17.831:3:3:114:0:0:0,-0.90309,-10 0/0:23.8516:5:5:179:0:0:0,-1.50515,-10 0/0:81.0472:24:24:833:0:0:0,-7.22472,-10 0/0:29.8722:7:7:262:0:0:0,-2.10721,-10 0/0:62.9855:19:18:669:0:0:0,-5.41854,-10 0/0:23.8516:5:5:188:0:0:0,-1.50515,-10 0/0:56.9649:16:16:578:0:0:0,-4.81648,-10 0/0:23.8516:5:5:190:0:0:0,-1.50515,-10 0/0:65.9958:19:19:713:0:0:0,-5.71957,-10 0/0:56.9649:16:16:568:0:0:0,-4.81648,-10 0/0:84.0575:25:25:908:0:0:0,-7.52575,-10 0/0:87.0677:26:26:968:0:0:0,-7.82678,-10 0/0:29.8722:7:7:261:0:0:0,-2.10721,-10 0/0:84.0575:25:25:917:0:0:0,-7.52575,-10 0/0:53.9546:15:15:556:0:0:0,-4.51545,-10 0/0:26.8619:6:6:226:0:0:0,-1.80618,-10 0/0:81.0472:24:24:852:0:0:0,-7.22472,-10 0/0:32.8825:8:8:300:0:0:0,-2.40824,-10 0/0:32.8825:8:8:299:0:0:0,-2.40824,-10 0/0:72.0164:21:21:733:0:0:0,-6.32163,-10 0/0:59.9752:17:17:610:0:0:0,-5.11751,-10 0/0:35.8928:9:9:338:0:0:0,-2.70927,-10 0/0:84.0575:25:25:903:0:0:0,-7.52575,-10 0/0:38.9031:10:10:374:0:0:0,-3.0103,-10 0/0:41.9134:11:11:368:0:0:0,-3.31133,-10 1/1:14.396:13:0:0:13:478:-10,-3.91339,0 0/1:0.0406763:5:0:0:5:190:-10,-1.50515,0 0/1:0.701507:9:0:0:9:324:-10,-2.70927,0 1/1:47.5093:24:0:0:24:870:-10,-7.22472,0 1/1:41.4887:22:0:0:22:822:-10,-6.62266,0 0/1:99:16:8:293:8:300:-10,0,-10 0/1:99:18:8:302:10:372:-10,0,-10 0/0:29.8722:7:7:265:0:0:0,-2.10721,-10 0/0:17.831:3:3:112:0:0:0,-0.90309,-10 0/0:29.8722:7:7:246:0:0:0,-2.10721,-10 0/0:47.934:13:13:487:0:0:0,-3.91339,-10 0/1:99:7:3:91:4:146:-10,0,-7.93019 1/1:14.396:13:0:0:13:494:-10,-3.91339,0 1/1:14.396:13:0:0:13:487:-10,-3.91339,0 0/1:0.701507:9:0:0:9:340:-10,-2.70927,0 scaffold_86 2995382 . G A 2036.88 . AB=0.57;ABP=7.26639;AC=9;AF=0.0494505;AN=182;AO=77;CIGAR=1X;DP=1269;DPB=1269;DPRA=1.08355;EPP=170.214;EPPR=2580.56;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9715;NS=91;NUMALT=1;ODDS=1.68368;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2905;QR=43434;RO=1191;RPP=3.0385;RPPR=3.02671;RUN=1;SAF=38;SAP=3.0385;SAR=39;SRF=598;SRP=3.05588;SRR=593;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.842:11:11:388:0:0:0,-3.31133,-10 0/0:36.8111:8:8:256:0:0:0,-2.40824,-10 0/0:42.8317:10:10:357:0:0:0,-3.0103,-10 0/0:60.8935:16:16:599:0:0:0,-4.81648,-10 0/0:42.8317:10:10:357:0:0:0,-3.0103,-10 0/0:21.7596:3:3:112:0:0:0,-0.90309,-10 0/0:99:35:35:1280:0:0:0,-10,-10 0/0:63.9038:17:17:615:0:0:0,-5.11751,-10 0/0:45.842:11:11:414:0:0:0,-3.31133,-10 .:.:.:.:.:.:.:. 0/0:30.7905:6:6:221:0:0:0,-1.80618,-10 0/0:21.7596:3:3:114:0:0:0,-0.90309,-10 0/0:69.9244:19:19:719:0:0:0,-5.71957,-10 0/0:57.8832:15:15:544:0:0:0,-4.51545,-10 0/0:78.9553:22:22:803:0:0:0,-6.62266,-10 0/0:60.8935:16:16:606:0:0:0,-4.81648,-10 0/1:99:17:8:298:9:338:-10,0,-10 0/0:33.8008:7:7:244:0:0:0,-2.10721,-10 0/0:63.9038:17:17:645:0:0:0,-5.11751,-10 0/0:84.9758:24:24:882:0:0:0,-7.22472,-10 0/0:57.8832:15:15:553:0:0:0,-4.51545,-10 0/0:72.9347:20:20:735:0:0:0,-6.0206,-10 0/0:48.8523:12:12:429:0:0:0,-3.61236,-10 0/0:51.8626:13:13:488:0:0:0,-3.91339,-10 0/0:33.8008:7:7:265:0:0:0,-2.10721,-10 0/0:99:30:30:1052:0:0:0,-9.0309,-10 0/0:45.842:11:11:388:0:0:0,-3.31133,-10 0/0:30.7905:6:6:226:0:0:0,-1.80618,-10 0/0:39.8214:9:9:337:0:0:0,-2.70927,-10 0/0:78.9553:22:22:828:0:0:0,-6.62266,-10 0/0:24.7699:4:4:128:0:0:0,-1.20412,-10 0/0:48.8523:12:12:453:0:0:0,-3.61236,-10 0/0:51.8626:13:13:444:0:0:0,-3.91339,-10 0/0:48.8523:12:12:443:0:0:0,-3.61236,-10 0/0:75.945:21:21:774:0:0:0,-6.32163,-10 0/0:30.7905:6:6:221:0:0:0,-1.80618,-10 0/0:60.8935:16:16:597:0:0:0,-4.81648,-10 0/0:69.9244:19:19:708:0:0:0,-5.71957,-10 0/0:54.8729:14:14:486:0:0:0,-4.21442,-10 0/0:42.8317:10:10:367:0:0:0,-3.0103,-10 0/0:99:30:30:1128:0:0:0,-9.0309,-10 0/0:81.9655:23:23:805:0:0:0,-6.92369,-10 0/0:45.842:11:11:412:0:0:0,-3.31133,-10 0/0:75.945:22:21:789:0:0:0,-6.32163,-10 0/0:57.8832:15:15:562:0:0:0,-4.51545,-10 0/0:57.8832:15:15:559:0:0:0,-4.51545,-10 0/0:84.9758:24:24:832:0:0:0,-7.22472,-10 0/0:57.8832:15:15:546:0:0:0,-4.51545,-10 0/0:42.8317:10:10:377:0:0:0,-3.0103,-10 0/0:94.006:27:27:983:0:0:0,-8.12781,-10 0/0:27.7802:5:5:168:0:0:0,-1.50515,-10 0/0:78.9553:22:22:792:0:0:0,-6.62266,-10 0/0:42.8317:10:10:379:0:0:0,-3.0103,-10 0/0:30.7905:6:6:224:0:0:0,-1.80618,-10 0/0:78.9553:22:22:803:0:0:0,-6.62266,-10 0/0:39.8214:9:9:339:0:0:0,-2.70927,-10 0/0:72.9347:20:20:749:0:0:0,-6.0206,-10 0/0:27.7802:5:5:186:0:0:0,-1.50515,-10 0/0:36.8111:8:8:286:0:0:0,-2.40824,-10 0/0:33.8008:7:7:260:0:0:0,-2.10721,-10 1/1:18.6575:20:0:0:20:755:-10,-6.0206,0 0/0:33.8008:7:7:265:0:0:0,-2.10721,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/1:99:16:7:222:9:337:-10,0,-10 0/0:27.7802:5:5:188:0:0:0,-1.50515,-10 0/0:69.9244:19:19:679:0:0:0,-5.71957,-10 0/0:54.8729:14:14:497:0:0:0,-4.21442,-10 0/1:0.294404:7:0:0:7:262:-10,-2.10721,0 0/1:99:26:16:575:10:380:-10,0,-10 0/1:0.144708:6:0:0:6:225:-10,-1.80618,0 0/0:48.8523:12:12:412:0:0:0,-3.61236,-10 0/0:90.9961:26:26:941:0:0:0,-7.82678,-10 0/0:60.8935:16:16:593:0:0:0,-4.81648,-10 0/0:30.7905:6:6:224:0:0:0,-1.80618,-10 0/0:75.945:21:21:796:0:0:0,-6.32163,-10 0/1:0.610226:8:0:0:8:304:-10,-2.40824,0 0/0:60.8935:16:16:584:0:0:0,-4.81648,-10 0/0:36.8111:8:8:302:0:0:0,-2.40824,-10 0/0:18.7493:2:2:76:0:0:0,-0.60206,-7.22 0/0:27.7802:5:5:189:0:0:0,-1.50515,-10 0/0:81.9655:23:23:834:0:0:0,-6.92369,-10 0/0:78.9553:22:22:786:0:0:0,-6.62266,-10 0/0:39.8214:9:9:314:0:0:0,-2.70927,-10 0/0:75.945:21:21:732:0:0:0,-6.32163,-10 0/1:99:20:12:403:8:304:-10,0,-10 0/0:24.7699:4:4:141:0:0:0,-1.20412,-10 0/0:45.842:11:11:396:0:0:0,-3.31133,-10 0/0:45.842:11:11:411:0:0:0,-3.31133,-10 0/0:24.7699:4:4:151:0:0:0,-1.20412,-10 0/0:51.8626:13:13:474:0:0:0,-3.91339,-10 0/0:36.8111:8:8:304:0:0:0,-2.40824,-10 0/0:36.8111:8:8:295:0:0:0,-2.40824,-10 scaffold_86 3078142 . C T 1753.61 . AB=0.589744;ABP=8.46682;AC=5;AF=0.0271739;AN=184;AO=70;CIGAR=1X;DP=2621;DPB=2621;DPRA=1.23521;EPP=3.13438;EPPR=3.11338;GTI=1;LEN=1;MEANALT=1.14286;MQM=52.1571;MQMR=59.8309;NS=92;NUMALT=1;ODDS=1.41437;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2484;QR=92433;RO=2549;RPP=155.013;RPPR=5512.07;RUN=1;SAF=34;SAP=3.13438;SAR=36;SRF=1266;SRP=3.2565;SRR=1283;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:86.5903:20:20:738:0:0:0,-6.0206,-10 0/0:74.5496:16:16:597:0:0:0,-4.81648,-10 0/0:99:29:29:1043:0:0:0,-8.72987,-10 0/0:65.5187:13:13:483:0:0:0,-3.91339,-10 0/0:71.5393:15:15:548:0:0:0,-4.51545,-10 0/0:77.5599:17:17:618:0:0:0,-5.11751,-10 0/0:99:69:69:2544:0:0:0,-10,-10 0/0:99:41:41:1451:0:0:0,-10,-10 0/0:86.5903:20:20:756:0:0:0,-6.0206,-10 0/0:41.4363:5:5:183:0:0:0,-1.50515,-10 0/0:62.5084:12:12:384:0:0:0,-3.61236,-10 0/0:62.5084:12:12:430:0:0:0,-3.61236,-10 0/0:99:25:25:907:0:0:0,-7.52575,-10 0/0:99:38:38:1400:0:0:0,-10,-10 0/0:99:53:53:1855:0:0:0,-10,-10 0/0:99:44:44:1631:0:0:0,-10,-10 0/0:99:36:36:1266:0:0:0,-10,-10 0/0:71.5393:15:15:534:0:0:0,-4.51545,-10 0/0:95.6174:23:23:826:0:0:0,-6.92369,-10 0/0:99:54:54:1985:0:0:0,-10,-10 0/0:99:25:25:907:0:0:0,-7.52575,-10 0/1:99:37:13:488:24:878:-10,0,-10 0/0:80.5702:18:18:660:0:0:0,-5.41854,-10 0/0:99:34:34:1197:0:0:0,-10,-10 0/0:99:34:34:1285:0:0:0,-10,-10 0/0:99:36:35:1307:1:16:0,-7.68078,-10 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:95.6174:23:23:852:0:0:0,-6.92369,-10 0/0:99:39:39:1433:0:0:0,-10,-10 0/0:99:58:57:2042:1:16:0,-10,-10 0/0:50.4672:8:8:279:0:0:0,-2.40824,-10 0/0:41.4363:5:5:189:0:0:0,-1.50515,-10 0/0:99:27:27:899:0:0:0,-8.12781,-10 0/0:77.5599:17:17:620:0:0:0,-5.11751,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/1:5.06324e-05:6:0:0:6:217:-10,-1.80618,0 0/0:62.5084:12:12:428:0:0:0,-3.61236,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:83.5805:19:19:696:0:0:0,-5.71957,-10 0/0:99:33:33:1173:0:0:0,-9.93399,-10 1/1:7.08834:22:0:0:21:760:-10,-6.32163,0 0/0:99:34:34:1238:0:0:0,-10,-10 0/0:99:48:47:1704:1:16:0,-10,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:99:25:25:918:0:0:0,-7.52575,-10 0/0:99:60:60:2180:0:0:0,-10,-10 0/0:99:40:40:1444:0:0:0,-10,-10 0/0:77.5599:17:17:572:0:0:0,-5.11751,-10 0/0:99:45:45:1614:0:0:0,-10,-10 0/0:77.5599:17:17:614:0:0:0,-5.11751,-10 0/0:99:37:37:1342:0:0:0,-10,-10 0/0:99:30:30:1123:0:0:0,-9.0309,-10 0/0:65.5187:13:13:494:0:0:0,-3.91339,-10 0/0:99:67:67:2430:0:0:0,-10,-10 0/0:99:29:29:1036:0:0:0,-8.72987,-10 0/0:99:38:38:1378:0:0:0,-10,-10 0/0:65.5187:13:13:494:0:0:0,-3.91339,-10 0/0:95.6174:23:23:847:0:0:0,-6.92369,-10 0/0:77.5599:17:17:620:0:0:0,-5.11751,-10 0/0:99:49:49:1795:0:0:0,-10,-10 0/0:99:31:30:1074:0:0:0,-9.0309,-10 0/0:99:57:57:1997:0:0:0,-10,-10 0/0:98.6306:24:24:858:0:0:0,-7.22472,-10 0/0:92.6111:22:22:817:0:0:0,-6.62266,-10 0/0:99:44:44:1607:0:0:0,-10,-10 0/0:99:27:27:971:0:0:0,-8.12781,-10 0/0:62.5084:12:12:424:0:0:0,-3.61236,-10 0/0:99:56:56:2030:0:0:0,-10,-10 0/0:83.5805:19:19:715:0:0:0,-5.71957,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:99:39:39:1382:0:0:0,-10,-10 0/0:99:45:45:1650:0:0:0,-10,-10 0/0:83.5805:19:19:709:0:0:0,-5.71957,-10 0/0:99:44:44:1628:0:0:0,-10,-10 0/0:71.5393:15:15:549:0:0:0,-4.51545,-10 0/0:74.5496:16:16:571:0:0:0,-4.81648,-10 0/0:83.5805:19:19:699:0:0:0,-5.71957,-10 0/0:56.4878:10:10:358:0:0:0,-3.0103,-10 0/0:65.5187:13:13:490:0:0:0,-3.91339,-10 0/0:99:61:61:2139:0:0:0,-10,-10 0/0:99:37:37:1352:0:0:0,-10,-10 0/1:99:35:19:640:16:581:-10,0,-10 0/0:99:30:30:1048:0:0:0,-9.0309,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:50.4672:8:8:301:0:0:0,-2.40824,-10 0/0:77.5599:17:17:599:0:0:0,-5.11751,-10 0/0:83.5805:19:19:694:0:0:0,-5.71957,-10 0/0:50.4672:8:8:304:0:0:0,-2.40824,-10 0/0:89.6001:21:21:788:0:0:0,-6.32163,-10 0/0:99:28:28:986:0:0:0,-8.42884,-10 0/0:92.6111:22:22:821:0:0:0,-6.62266,-10 scaffold_86 3131517 . A G 108.804 . AB=0.428571;ABP=3.63072;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1578;DPB=1578;DPRA=0.705036;EPP=9.04217;EPPR=3.04499;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=5.483;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=311;QR=56978;RO=1565;RPP=22.5536;RPPR=3401.36;RUN=1;SAF=7;SAP=9.04217;SAR=2;SRF=780;SRP=3.04499;SRR=785;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:18:18:641:0:0:0,-5.41854,-10 0/0:62.926:6:6:206:0:0:0,-1.80618,-10 0/0:99:19:19:693:0:0:0,-5.71957,-10 0/0:83.998:13:13:444:0:0:0,-3.91339,-10 0/0:0.00695104:6:5:179:1:31:-2.07197,0,-10 0/0:62.926:6:6:218:0:0:0,-1.80618,-10 0/0:99:23:23:861:0:0:0,-6.92369,-10 0/0:99:18:18:676:0:0:0,-5.41854,-10 0/0:87.0083:14:14:504:0:0:0,-4.21442,-10 0/0:71.9569:9:9:289:0:0:0,-2.70927,-10 0/0:53.8951:3:3:114:0:0:0,-0.90309,-10 0/0:65.9363:7:7:251:0:0:0,-2.10721,-10 0/0:74.3132:18:17:600:1:16:0,-2.56327,-10 0/0:99:34:34:1239:0:0:0,-10,-10 0/0:99:23:23:833:0:0:0,-6.92369,-10 0/0:99:24:24:859:0:0:0,-7.22472,-10 0/0:99:25:25:916:0:0:0,-7.52575,-10 0/0:80.9878:12:12:442:0:0:0,-3.61236,-10 0/0:87.0083:14:14:497:0:0:0,-4.21442,-10 0/0:99:36:36:1329:0:0:0,-10,-10 0/0:96.038:17:17:620:0:0:0,-5.11751,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:65.9363:7:7:264:0:0:0,-2.10721,-10 0/0:99:29:29:1067:0:0:0,-8.72987,-10 0/0:99:21:21:767:0:0:0,-6.32163,-10 0/0:87.0083:14:14:497:0:0:0,-4.21442,-10 0/0:99:22:22:804:0:0:0,-6.62266,-10 0/0:96.038:17:17:617:0:0:0,-5.11751,-10 0/0:99:18:18:653:0:0:0,-5.41854,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:90.0174:15:15:534:0:0:0,-4.51545,-10 0/0:56.9054:4:4:148:0:0:0,-1.20412,-10 0/0:93.0284:16:16:529:0:0:0,-4.81648,-10 0/0:62.926:6:6:213:0:0:0,-1.80618,-10 0/0:77.9775:11:11:405:0:0:0,-3.31133,-10 0/0:74.9672:10:10:354:0:0:0,-3.0103,-10 0/0:71.9569:9:9:339:0:0:0,-2.70927,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:90.0174:15:15:543:0:0:0,-4.51545,-10 0/0:77.9775:11:11:399:0:0:0,-3.31133,-10 0/0:99:19:19:701:0:0:0,-5.71957,-10 0/0:80.9878:12:12:428:0:0:0,-3.61236,-10 0/0:83.998:13:13:484:0:0:0,-3.91339,-10 0/0:99:28:28:1022:0:0:0,-8.42884,-10 0/0:99:21:21:761:0:0:0,-6.32163,-10 0/0:74.9672:10:10:380:0:0:0,-3.0103,-10 0/0:99:47:47:1728:0:0:0,-10,-10 0/0:99:31:31:1169:0:0:0,-9.33193,-10 0/0:68.9466:8:8:288:0:0:0,-2.40824,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:83.998:13:13:467:0:0:0,-3.91339,-10 0/0:99:26:26:938:0:0:0,-7.82678,-10 0/0:77.9775:11:11:380:0:0:0,-3.31133,-10 0/0:65.9363:8:7:266:0:0:0,-2.10721,-10 0/0:99:43:43:1572:0:0:0,-10,-10 0/0:71.9569:9:9:326:0:0:0,-2.70927,-10 0/0:99:22:21:787:0:0:0,-6.32163,-10 0/0:56.9054:4:4:147:0:0:0,-1.20412,-10 0/0:99:19:19:693:0:0:0,-5.71957,-10 0/0:68.9466:8:8:292:0:0:0,-2.40824,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:96.038:17:17:646:0:0:0,-5.11751,-10 0/0:99:30:30:1066:0:0:0,-9.0309,-10 0/0:87.0083:14:14:527:0:0:0,-4.21442,-10 0/0:83.998:13:13:476:0:0:0,-3.91339,-10 0/0:99:21:21:720:0:0:0,-6.32163,-10 0/0:99:22:21:767:0:0:0,-6.32163,-10 0/0:62.926:6:6:218:0:0:0,-1.80618,-10 0/0:99:36:36:1342:0:0:0,-10,-10 0/0:74.9672:10:10:371:0:0:0,-3.0103,-10 0/0:96.038:17:17:592:0:0:0,-5.11751,-10 0/0:99:19:19:683:0:0:0,-5.71957,-10 0/0:99:24:24:831:0:0:0,-7.22472,-10 0/0:83.998:13:13:481:0:0:0,-3.91339,-10 0/0:99:24:24:884:0:0:0,-7.22472,-10 0/0:83.998:14:13:461:0:0:0,-3.91339,-10 0/0:74.9672:10:10:346:0:0:0,-3.0103,-10 0/0:99:21:21:761:0:0:0,-6.32163,-10 0/0:68.9466:8:8:304:0:0:0,-2.40824,-10 0/0:50.8848:2:2:75:0:0:0,-0.60206,-7.125 0/0:99:45:45:1638:0:0:0,-10,-10 0/0:99:20:20:744:0:0:0,-6.0206,-10 0/0:99:19:19:666:0:0:0,-5.71957,-10 0/1:99:14:8:300:6:226:-10,0,-10 0/0:83.998:13:13:478:0:0:0,-3.91339,-10 0/0:50.8848:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:21:21:791:0:0:0,-6.32163,-10 0/0:0.017986:11:10:342:1:38:-1.53006,0,-10 0/0:59.9157:5:5:189:0:0:0,-1.50515,-10 0/0:99:18:18:682:0:0:0,-5.41854,-10 0/0:74.9672:10:10:375:0:0:0,-3.0103,-10 0/0:87.0083:14:14:519:0:0:0,-4.21442,-10 scaffold_86 3164490 . G C 331.669 . AB=0.464286;ABP=3.32051;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1892;DPB=1892;DPRA=1.36695;EPP=3.17734;EPPR=5.67434;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9601;NS=92;NUMALT=1;ODDS=9.26708;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=492;QR=68674;RO=1878;RPP=31.2394;RPPR=4081.04;RUN=1;SAF=7;SAP=3.17734;SAR=6;SRF=915;SRP=5.67434;SRR=963;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:76.3711:15:15:532:0:0:0,-4.51545,-10 0/0:58.3094:9:9:272:0:0:0,-2.70927,-10 0/0:91.422:20:20:744:0:0:0,-6.0206,-10 0/0:73.3608:14:14:519:0:0:0,-4.21442,-10 0/0:76.3711:15:15:560:0:0:0,-4.51545,-10 0/0:52.2888:7:7:222:0:0:0,-2.10721,-10 0/0:99:35:35:1270:0:0:0,-10,-10 0/0:79.3814:16:16:599:0:0:0,-4.81648,-10 0/0:70.3506:13:13:480:0:0:0,-3.91339,-10 0/0:43.2579:4:4:152:0:0:0,-1.20412,-10 0/0:55.2991:8:8:304:0:0:0,-2.40824,-10 0/0:64.33:11:11:374:0:0:0,-3.31133,-10 0/0:99:31:31:1158:0:0:0,-9.33193,-10 0/0:99:40:40:1507:0:0:0,-10,-10 0/0:88.412:19:19:684:0:0:0,-5.71957,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:82.3917:17:17:615:0:0:0,-5.11751,-10 0/0:67.3403:12:12:438:0:0:0,-3.61236,-10 0/0:99:28:28:988:0:0:0,-8.42884,-10 0/0:99:42:42:1525:0:0:0,-10,-10 0/0:99:26:26:955:0:0:0,-7.82678,-10 0/1:99:28:15:565:13:492:-10,0,-10 0/0:46.2682:5:5:181:0:0:0,-1.50515,-10 0/0:73.3608:14:14:527:0:0:0,-4.21442,-10 0/0:73.3608:14:14:524:0:0:0,-4.21442,-10 0/0:99:26:26:936:0:0:0,-7.82678,-10 0/0:82.3917:17:17:607:0:0:0,-5.11751,-10 0/0:79.3814:16:16:605:0:0:0,-4.81648,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:99:32:32:1139:0:0:0,-9.63296,-10 0/0:46.2682:5:5:186:0:0:0,-1.50515,-10 0/0:58.3094:9:9:338:0:0:0,-2.70927,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:73.3608:14:14:532:0:0:0,-4.21442,-10 0/0:97.4406:22:22:812:0:0:0,-6.62266,-10 0/0:49.2785:6:6:219:0:0:0,-1.80618,-10 0/0:99:23:23:868:0:0:0,-6.92369,-10 0/0:99:38:38:1372:0:0:0,-10,-10 0/0:79.3814:16:16:595:0:0:0,-4.81648,-10 0/0:79.3814:16:16:579:0:0:0,-4.81648,-10 0/0:99:37:37:1353:0:0:0,-10,-10 0/0:94.4317:21:21:737:0:0:0,-6.32163,-10 0/0:99:26:26:953:0:0:0,-7.82678,-10 0/0:99:37:36:1326:0:0:0,-10,-10 0/0:91.422:20:20:671:0:0:0,-6.0206,-10 0/0:82.3917:17:17:639:0:0:0,-5.11751,-10 0/0:99:43:43:1595:0:0:0,-10,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:88.412:19:19:692:0:0:0,-5.71957,-10 0/0:99:43:43:1575:0:0:0,-10,-10 0/0:61.3197:10:10:366:0:0:0,-3.0103,-10 0/0:99:48:48:1749:0:0:0,-10,-10 0/0:61.3197:10:10:374:0:0:0,-3.0103,-10 0/0:55.2991:8:8:281:0:0:0,-2.40824,-10 0/0:99:47:47:1706:0:0:0,-10,-10 0/0:58.3094:9:9:334:0:0:0,-2.70927,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:58.3094:9:9:339:0:0:0,-2.70927,-10 0/0:99:23:23:810:0:0:0,-6.92369,-10 0/0:58.3094:9:9:338:0:0:0,-2.70927,-10 0/0:99:27:27:971:0:0:0,-8.12781,-10 0/0:79.3814:16:16:568:0:0:0,-4.81648,-10 0/0:99:34:34:1241:0:0:0,-10,-10 0/0:70.3506:13:13:489:0:0:0,-3.91339,-10 0/0:55.2991:8:8:302:0:0:0,-2.40824,-10 0/0:94.4317:21:21:793:0:0:0,-6.32163,-10 0/0:88.412:19:19:719:0:0:0,-5.71957,-10 0/0:67.3403:12:12:412:0:0:0,-3.61236,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:49.2785:6:6:220:0:0:0,-1.80618,-10 0/0:64.33:11:11:385:0:0:0,-3.31133,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:99:23:23:841:0:0:0,-6.92369,-10 0/0:97.4406:22:22:811:0:0:0,-6.62266,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:73.3608:14:14:515:0:0:0,-4.21442,-10 0/0:82.3917:17:17:637:0:0:0,-5.11751,-10 0/0:73.3608:14:14:521:0:0:0,-4.21442,-10 0/0:46.2682:5:5:167:0:0:0,-1.50515,-10 0/0:99:27:27:976:0:0:0,-8.12781,-10 0/0:99:29:29:1053:0:0:0,-8.72987,-10 0/0:99:26:26:935:0:0:0,-7.82678,-10 0/0:99:24:24:866:0:0:0,-7.22472,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:99:26:26:943:0:0:0,-7.82678,-10 0/0:40.2476:3:3:114:0:0:0,-0.90309,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:82.3917:17:17:634:0:0:0,-5.11751,-10 0/0:55.2991:8:8:284:0:0:0,-2.40824,-10 0/0:61.3197:10:10:353:0:0:0,-3.0103,-10 0/0:88.412:19:19:669:0:0:0,-5.71957,-10 0/0:91.422:20:20:734:0:0:0,-6.0206,-10 scaffold_86 3164494 . T A 435.294 . AB=0.485714;ABP=3.07234;AC=1;AF=0.00543478;AN=184;AO=18;CIGAR=1X;DP=1892;DPB=1892;DPRA=1.62651;EPP=3.0103;EPPR=6.5211;GTI=0;LEN=1;MEANALT=1.5;MQM=60;MQMR=59.9642;NS=92;NUMALT=1;ODDS=6.45613;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=646;QR=69180;RO=1871;RPP=42.0968;RPPR=4057.15;RUN=1;SAF=9;SAP=3.0103;SAR=9;SRF=909;SRP=6.27041;SRR=962;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.1813:15:15:541:0:0:0,-4.51545,-10 0/0:46.1195:9:9:316:0:0:0,-2.70927,-10 0/0:79.2328:20:20:723:0:0:0,-6.0206,-10 0/0:61.171:14:14:525:0:0:0,-4.21442,-10 0/0:64.1813:15:15:563:0:0:0,-4.51545,-10 0/0:40.0989:7:7:257:0:0:0,-2.10721,-10 0/0:99:35:35:1261:0:0:0,-10,-10 0/0:67.1916:16:16:578:0:0:0,-4.81648,-10 0/0:58.1607:13:13:485:0:0:0,-3.91339,-10 0/0:31.068:4:4:152:0:0:0,-1.20412,-10 0/0:43.1092:8:8:304:0:0:0,-2.40824,-10 0/0:52.1401:11:11:395:0:0:0,-3.31133,-10 0/0:83.703:31:29:1082:1:16:0,-6.22378,-10 0/0:99:40:40:1500:0:0:0,-10,-10 0/0:76.2225:19:19:720:0:0:0,-5.71957,-10 0/0:97.2953:26:26:954:0:0:0,-7.82678,-10 0/0:67.1916:17:16:603:0:0:0,-4.81648,-10 0/0:55.1504:12:12:452:0:0:0,-3.61236,-10 0/0:99:28:28:1046:0:0:0,-8.42884,-10 0/0:99:42:42:1528:0:0:0,-10,-10 0/0:97.2953:26:26:958:0:0:0,-7.82678,-10 0/0:99:28:28:1050:0:0:0,-8.42884,-10 0/0:34.0783:5:5:183:0:0:0,-1.50515,-10 0/0:61.171:14:14:508:0:0:0,-4.21442,-10 0/0:61.171:14:14:511:0:0:0,-4.21442,-10 0/0:97.2953:26:26:943:0:0:0,-7.82678,-10 0/0:70.2019:17:17:637:0:0:0,-5.11751,-10 0/0:67.1916:16:16:606:0:0:0,-4.81648,-10 0/0:99:30:30:1134:0:0:0,-9.0309,-10 0/0:99:32:32:1130:0:0:0,-9.63296,-10 0/0:34.0783:5:5:185:0:0:0,-1.50515,-10 0/0:46.1195:9:9:337:0:0:0,-2.70927,-10 0/0:85.2531:23:22:828:0:0:0,-6.62266,-10 0/0:61.171:14:14:532:0:0:0,-4.21442,-10 0/0:85.2531:22:22:827:0:0:0,-6.62266,-10 0/0:37.0886:6:6:225:0:0:0,-1.80618,-10 0/0:88.2638:23:23:852:0:0:0,-6.92369,-10 0/0:99:38:38:1395:0:0:0,-10,-10 0/0:67.1916:16:16:608:0:0:0,-4.81648,-10 0/0:67.1916:16:16:588:0:0:0,-4.81648,-10 0/0:99:37:37:1356:0:0:0,-10,-10 0/0:79.2328:20:20:711:0:0:0,-6.0206,-10 0/0:97.2953:26:26:970:0:0:0,-7.82678,-10 0/0:99:37:37:1369:0:0:0,-10,-10 0/0:79.2328:20:20:728:0:0:0,-6.0206,-10 0/0:70.2019:17:17:644:0:0:0,-5.11751,-10 0/0:99:43:43:1621:0:0:0,-10,-10 0/0:99:34:34:1279:0:0:0,-10,-10 0/0:76.2225:19:19:719:0:0:0,-5.71957,-10 0/0:99:43:43:1579:0:0:0,-10,-10 0/0:49.1298:10:10:374:0:0:0,-3.0103,-10 0/0:99:48:48:1726:0:0:0,-10,-10 0/0:49.1298:10:10:356:0:0:0,-3.0103,-10 0/0:43.1092:8:8:303:0:0:0,-2.40824,-10 0/0:99:47:47:1748:0:0:0,-10,-10 0/0:46.1195:9:9:342:0:0:0,-2.70927,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:46.1195:9:9:342:0:0:0,-2.70927,-10 0/0:88.2638:23:23:839:0:0:0,-6.92369,-10 0/0:46.1195:9:9:333:0:0:0,-2.70927,-10 0/0:99:27:27:1010:0:0:0,-8.12781,-10 0/0:67.1916:16:16:558:0:0:0,-4.81648,-10 0/0:99:34:34:1269:0:0:0,-10,-10 0/0:58.1607:13:13:472:0:0:0,-3.91339,-10 0/0:43.1092:8:8:303:0:0:0,-2.40824,-10 0/0:82.2432:21:21:771:0:0:0,-6.32163,-10 0/0:79.2328:20:20:760:0:0:0,-6.0206,-10 0/0:55.1504:12:12:455:0:0:0,-3.61236,-10 0/0:99:33:33:1254:0:0:0,-9.93399,-10 0/0:37.0886:6:6:227:0:0:0,-1.80618,-10 0/0:52.1401:11:11:411:0:0:0,-3.31133,-10 0/1:99:35:18:658:17:630:-10,0,-10 0/0:88.2638:23:23:835:0:0:0,-6.92369,-10 0/0:85.2531:22:22:825:0:0:0,-6.62266,-10 0/0:99:35:35:1318:0:0:0,-10,-10 0/0:61.171:14:14:507:0:0:0,-4.21442,-10 0/0:70.2019:17:17:624:0:0:0,-5.11751,-10 0/0:61.171:14:14:510:0:0:0,-4.21442,-10 0/0:34.0783:5:5:183:0:0:0,-1.50515,-10 0/0:99:27:27:1004:0:0:0,-8.12781,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:97.2953:26:26:941:0:0:0,-7.82678,-10 0/0:91.2742:24:24:860:0:0:0,-7.22472,-10 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/0:97.2953:26:26:956:0:0:0,-7.82678,-10 0/0:28.0577:3:3:114:0:0:0,-0.90309,-10 0/0:94.2847:25:25:917:0:0:0,-7.52575,-10 0/0:70.2019:17:17:641:0:0:0,-5.11751,-10 0/0:43.1092:8:8:294:0:0:0,-2.40824,-10 0/0:49.1298:10:10:362:0:0:0,-3.0103,-10 0/0:76.2225:19:19:709:0:0:0,-5.71957,-10 0/0:79.2328:20:20:734:0:0:0,-6.0206,-10 scaffold_86 3443668 . G A 150.881 . AB=0.171171;ABP=107.261;AC=4;AF=0.0217391;AN=184;AO=50;CIGAR=1X;DP=2483;DPB=2483;DPRA=1.28807;EPP=103.072;EPPR=4785.76;GTI=6;LEN=1;MEANALT=1.09524;MQM=60;MQMR=59.9502;NS=92;NUMALT=1;ODDS=2.41145;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1789;QR=88233;RO=2429;RPP=103.072;RPPR=4785.76;RUN=1;SAF=50;SAP=111.584;SAR=0;SRF=2429;SRP=5277.52;SRR=0;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:26:26:940:0:0:0,-7.82678,-10 0/0:99:21:21:767:0:0:0,-6.32163,-10 0/0:99:36:36:1318:0:0:0,-10,-10 0/0:99:15:15:568:0:0:0,-4.51545,-10 0/0:0.0708486:14:12:430:2:76:-4.96462,0,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:86.3489:55:52:1881:3:114:0,-1.49777,-10 0/0:99:24:24:865:0:0:0,-7.22472,-10 0/0:99:27:27:972:0:0:0,-8.12781,-10 0/0:90.696:10:10:376:0:0:0,-3.0103,-10 0/0:99:14:14:532:0:0:0,-4.21442,-10 0/0:81.6675:7:7:257:0:0:0,-2.10721,-10 0/0:99:26:26:925:0:0:0,-7.82678,-10 0/0:99:38:38:1369:0:0:0,-10,-10 0/0:99:37:37:1313:0:0:0,-10,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:99:20:20:694:0:0:0,-6.0206,-10 0/0:99:17:17:630:0:0:0,-5.11751,-10 0/0:99:19:19:636:0:0:0,-5.71957,-10 0/0:0.000222623:38:35:1265:3:111:-2.847,0,-10 0/0:4.52999e-05:22:19:683:2:63:-1.77392,0,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:99:18:18:612:0:0:0,-5.41854,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:99:35:35:1256:0:0:0,-10,-10 0/0:99:36:36:1331:0:0:0,-10,-10 0/0:72.5646:50:47:1699:3:114:0,-0.119244,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:5.1258e-06:30:28:975:2:76:-0.827589,0,-10 0/0:99:34:34:1214:0:0:0,-10,-10 0/0:93.7036:11:11:406:0:0:0,-3.31133,-10 0/1:10.999:18:15:510:3:114:-8.13315,0,-10 0/0:99:43:43:1535:0:0:0,-10,-10 0/0:99:19:19:674:0:0:0,-5.71957,-10 0/0:99:47:47:1724:0:0:0,-10,-10 0/0:78.6574:6:6:228:0:0:0,-1.80618,-10 0/0:99:20:20:741:0:0:0,-6.0206,-10 0/0:99:26:25:936:0:0:0,-7.52575,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:99:22:22:815:0:0:0,-6.62266,-10 0/0:99:39:39:1450:0:0:0,-10,-10 0/0:99:37:36:1310:1:34:0,-6.16991,-10 0/0:99:23:22:783:1:16:0,-3.96196,-10 0/1:20.9648:24:21:732:3:114:-6.72149,0,-10 0/0:99:21:21:740:0:0:0,-6.32163,-10 0/0:99:22:22:777:0:0:0,-6.62266,-10 0/0:99:35:34:1216:1:36:0,-5.39198,-10 0/0:99:29:29:1067:0:0:0,-8.72987,-10 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:99:47:46:1666:1:38:0,-8.67631,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:99:40:40:1427:0:0:0,-10,-10 0/0:90.0797:26:25:922:1:38:0,-2.61181,-10 0/0:96.7086:12:12:431:0:0:0,-3.61236,-10 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:99:46:43:1585:2:76:0,-3.56405,-10 0/0:99:17:17:622:0:0:0,-5.11751,-10 0/0:99:14:14:505:0:0:0,-4.21442,-10 0/0:77.6334:36:34:1240:2:74:0,-1.00774,-10 0/0:99:20:20:722:0:0:0,-6.0206,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:99:30:30:1123:0:0:0,-9.0309,-10 0/0:99:44:44:1594:0:0:0,-10,-10 0/0:99:23:23:829:0:0:0,-6.92369,-10 0/0:99:21:21:781:0:0:0,-6.32163,-10 0/0:99:26:26:981:0:0:0,-7.82678,-10 0/0:99:18:18:634:0:0:0,-5.41854,-10 0/0:99:14:14:494:0:0:0,-4.21442,-10 0/0:99:18:18:656:0:0:0,-5.41854,-10 0/0:99:14:14:530:0:0:0,-4.21442,-10 0/1:99:39:30:1061:9:301:-10,0,-10 0/1:19.8311:30:26:953:4:152:-9.46693,0,-10 0/0:6.58482e-06:25:23:867:2:63:-0.936371,0,-10 0/0:97.2849:40:38:1373:2:65:0,-2.97411,-10 0/0:1.78166e-05:28:26:955:2:76:-1.36865,0,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:99:33:33:1142:0:0:0,-9.93399,-10 0/0:99:43:43:1584:0:0:0,-10,-10 0/0:87.6871:9:9:340:0:0:0,-2.70927,-10 0/0:78.7622:22:21:771:1:38:0,-1.48024,-10 0/0:99:40:40:1432:0:0:0,-10,-10 0/0:99:21:21:787:0:0:0,-6.32163,-10 0/0:99:22:22:809:0:0:0,-6.62266,-10 0/0:99:28:28:1021:0:0:0,-8.42884,-10 0/0:99:14:14:519:0:0:0,-4.21442,-10 0/0:99:18:17:615:0:0:0,-5.11751,-10 0/0:99:29:29:1068:0:0:0,-8.72987,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:84.6775:8:8:298:0:0:0,-2.40824,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:99:42:42:1491:0:0:0,-10,-10 scaffold_93 332709 . C G 778.669 . AB=0.571429;ABP=3.63072;AC=3;AF=0.0163043;AN=184;AO=31;CIGAR=1X;DP=1861;DPB=1861;DPRA=0.90347;EPP=6.44263;EPPR=10.0572;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8807;NS=92;NUMALT=1;ODDS=0.520038;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1176;QR=65528;RO=1827;RPP=54.0749;RPPR=3806.97;RUN=1;SAF=17;SAP=3.64073;SAR=14;SRF=939;SRP=6.10171;SRR=888;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.4999:11:11:335:0:0:0,-3.31133,-10 0/0:65.5308:14:14:504:0:0:0,-4.21442,-10 0/1:99:14:6:228:8:304:-10,0,-10 0/0:77.572:18:18:623:0:0:0,-5.41854,-10 0/0:53.4896:10:10:368:0:0:0,-3.0103,-10 0/0:50.4793:9:9:335:0:0:0,-2.70927,-10 0/0:99:38:38:1393:0:0:0,-10,-10 0/0:89.6132:22:22:756:0:0:0,-6.62266,-10 0/0:53.4896:10:10:378:0:0:0,-3.0103,-10 0/0:35.4278:4:4:151:0:0:0,-1.20412,-10 0/0:38.4381:5:5:159:0:0:0,-1.50515,-10 0/0:41.4484:6:6:227:0:0:0,-1.80618,-10 0/0:99:38:38:1328:0:0:0,-10,-10 0/0:99:35:35:1254:0:0:0,-10,-10 0/0:83.5926:20:20:727:0:0:0,-6.0206,-10 0/0:92.6235:23:23:800:0:0:0,-6.92369,-10 0/0:80.5823:19:19:679:0:0:0,-5.71957,-10 0/0:50.4793:9:9:303:0:0:0,-2.70927,-10 0/0:98.6441:25:25:917:0:0:0,-7.52575,-10 0/0:99:42:42:1511:0:0:0,-10,-10 0/0:59.5102:12:12:426:0:0:0,-3.61236,-10 0/0:99:41:41:1492:0:0:0,-10,-10 0/0:41.4484:6:6:219:0:0:0,-1.80618,-10 0/0:98.6441:25:25:875:0:0:0,-7.52575,-10 0/0:99:28:28:996:0:0:0,-8.42884,-10 0/0:71.5514:16:16:580:0:0:0,-4.81648,-10 0/0:71.5514:16:16:573:0:0:0,-4.81648,-10 0/0:71.5514:16:16:541:0:0:0,-4.81648,-10 0/0:68.5411:15:15:543:0:0:0,-4.51545,-10 0/0:99:44:44:1507:0:0:0,-10,-10 0/0:47.469:8:8:282:0:0:0,-2.40824,-10 0/0:41.4484:6:6:228:0:0:0,-1.80618,-10 0/0:71.5514:16:16:568:0:0:0,-4.81648,-10 0/0:44.4587:7:7:261:0:0:0,-2.10721,-10 0/0:86.6024:21:21:777:0:0:0,-6.32163,-10 0/0:38.4381:5:5:189:0:0:0,-1.50515,-10 0/0:59.5102:12:12:427:0:0:0,-3.61236,-10 0/0:99:37:37:1291:0:0:0,-10,-10 0/0:77.572:18:18:629:0:0:0,-5.41854,-10 0/0:50.4793:9:9:333:0:0:0,-2.70927,-10 0/0:99:42:42:1545:0:0:0,-10,-10 0/0:99:26:26:941:0:0:0,-7.82678,-10 0/0:74.5617:17:17:620:0:0:0,-5.11751,-10 0/0:99:39:39:1364:0:0:0,-10,-10 0/0:99:27:27:914:0:0:0,-8.12781,-10 0/0:41.4484:6:6:226:0:0:0,-1.80618,-10 0/0:99:64:64:2275:0:0:0,-10,-10 0/0:77.572:18:18:661:0:0:0,-5.41854,-10 0/0:53.4896:10:10:350:0:0:0,-3.0103,-10 0/0:99:47:47:1639:0:0:0,-10,-10 0/0:50.4793:10:9:274:0:0:0,-2.70927,-10 0/0:99:55:55:1906:0:0:0,-10,-10 0/0:89.6132:22:22:807:0:0:0,-6.62266,-10 0/0:41.4484:6:6:220:0:0:0,-1.80618,-10 0/0:99:42:42:1537:0:0:0,-10,-10 0/0:71.5514:16:16:579:0:0:0,-4.81648,-10 0/0:83.5926:20:20:737:0:0:0,-6.0206,-10 0/0:47.469:9:8:304:0:0:0,-2.40824,-10 1/1:4.32442:22:0:0:22:835:-10,-6.62266,0 0/0:53.4896:10:10:369:0:0:0,-3.0103,-10 0/0:99:32:32:1151:0:0:0,-9.63296,-10 0/0:21.1947:19:18:632:1:37:0,-0.740816,-10 0/0:99:39:39:1418:0:0:0,-10,-10 0/0:86.6024:21:21:797:0:0:0,-6.32163,-10 0/0:62.5205:13:13:465:0:0:0,-3.91339,-10 0/0:99:29:29:1011:0:0:0,-8.72987,-10 0/0:74.5617:17:17:627:0:0:0,-5.11751,-10 0/0:65.5308:14:14:502:0:0:0,-4.21442,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:53.4896:10:10:351:0:0:0,-3.0103,-10 0/0:74.5617:18:17:587:0:0:0,-5.11751,-10 0/0:99:33:33:1206:0:0:0,-9.93399,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:74.5617:17:17:635:0:0:0,-5.11751,-10 0/0:99:26:26:910:0:0:0,-7.82678,-10 0/0:59.5102:12:12:386:0:0:0,-3.61236,-10 0/0:74.5617:17:17:636:0:0:0,-5.11751,-10 0/0:56.4999:11:11:392:0:0:0,-3.31133,-10 0/0:38.4381:5:5:190:0:0:0,-1.50515,-10 0/0:38.4381:5:5:189:0:0:0,-1.50515,-10 0/0:98.6441:25:25:876:0:0:0,-7.52575,-10 0/0:99:36:36:1330:0:0:0,-10,-10 0/0:99:29:29:1095:0:0:0,-8.72987,-10 0/0:89.6132:22:22:826:0:0:0,-6.62266,-10 0/0:86.6024:21:21:748:0:0:0,-6.32163,-10 0/0:41.4484:6:6:227:0:0:0,-1.80618,-10 0/0:80.5823:19:19:702:0:0:0,-5.71957,-10 0/0:74.5617:17:17:603:0:0:0,-5.11751,-10 0/0:41.4484:6:6:206:0:0:0,-1.80618,-10 0/0:68.5411:15:15:565:0:0:0,-4.51545,-10 0/0:68.5411:15:15:546:0:0:0,-4.51545,-10 0/0:68.5411:15:15:562:0:0:0,-4.51545,-10 scaffold_93 422028 . G A 602.625 . AB=0.666667;ABP=11.6962;AC=2;AF=0.0108696;AN=184;AO=28;CIGAR=1X;DP=1829;DPB=1829;DPRA=0.899477;EPP=7.97367;EPPR=10.5435;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=6.09445;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=984;QR=65478;RO=1799;RPP=63.8115;RPPR=3909.49;RUN=1;SAF=10;SAP=7.97367;SAR=18;SRF=860;SRP=10.5435;SRR=939;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.6074:13:13:488:0:0:0,-3.91339,-10 0/0:53.5765:10:10:336:0:0:0,-3.0103,-10 0/0:99:42:42:1458:0:0:0,-10,-10 0/0:33.7217:19:18:653:1:38:0,-0.640816,-10 0/0:80.6691:19:19:675:0:0:0,-5.71957,-10 0/0:62.6074:13:13:470:0:0:0,-3.91339,-10 0/0:99:34:34:1239:0:0:0,-10,-10 0/0:83.6794:20:20:748:0:0:0,-6.0206,-10 0/0:68.628:15:15:522:0:0:0,-4.51545,-10 0/0:44.5456:7:7:262:0:0:0,-2.10721,-10 0/0:47.5559:8:8:294:0:0:0,-2.40824,-10 0/0:56.5868:11:11:403:0:0:0,-3.31133,-10 0/0:99:41:41:1522:0:0:0,-10,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:74.6486:17:17:616:0:0:0,-5.11751,-10 0/0:98.7275:25:25:937:0:0:0,-7.52575,-10 0/0:59.5971:12:12:448:0:0:0,-3.61236,-10 0/0:83.6794:20:20:753:0:0:0,-6.0206,-10 0/0:99:40:40:1455:0:0:0,-10,-10 0/0:83.6794:20:20:738:0:0:0,-6.0206,-10 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:50.5662:9:9:328:0:0:0,-2.70927,-10 0/0:95.7189:24:24:886:0:0:0,-7.22472,-10 0/0:74.6486:17:17:624:0:0:0,-5.11751,-10 0/0:95.7189:24:24:873:0:0:0,-7.22472,-10 0/0:59.5971:12:12:449:0:0:0,-3.61236,-10 0/0:44.5456:7:7:262:0:0:0,-2.10721,-10 0/0:77.6588:18:18:621:0:0:0,-5.41854,-10 0/0:99:30:29:1093:0:0:0,-8.72987,-10 0/0:35.5147:4:4:152:0:0:0,-1.20412,-10 0/0:26.4838:1:1:34:0:0:0,-0.30103,-3.4 0/0:99:26:26:980:0:0:0,-7.82678,-10 0/0:62.6074:13:13:466:0:0:0,-3.91339,-10 0/0:89.6996:22:22:804:0:0:0,-6.62266,-10 0/0:44.5456:7:7:243:0:0:0,-2.10721,-10 0/0:53.5765:10:10:358:0:0:0,-3.0103,-10 0/0:99:33:33:1239:0:0:0,-9.93399,-10 0/0:65.6177:14:14:519:0:0:0,-4.21442,-10 0/0:83.6794:20:20:748:0:0:0,-6.0206,-10 0/0:99:30:30:1128:0:0:0,-9.0309,-10 0/0:68.628:15:15:548:0:0:0,-4.51545,-10 0/0:89.6996:22:22:807:0:0:0,-6.62266,-10 0/0:86.6895:21:21:764:0:0:0,-6.32163,-10 0/0:99:26:26:901:0:0:0,-7.82678,-10 0/0:59.5971:12:12:451:0:0:0,-3.61236,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:89.6996:22:22:811:0:0:0,-6.62266,-10 0/0:65.6177:14:14:477:0:0:0,-4.21442,-10 0/0:99:31:31:1112:0:0:0,-9.33193,-10 0/0:68.628:15:15:562:0:0:0,-4.51545,-10 0/0:69.7586:24:23:838:1:16:0,-4.24451,-10 0/0:38.525:5:5:168:0:0:0,-1.50515,-10 0/0:44.5456:7:7:240:0:0:0,-2.10721,-10 0/0:99:35:34:1249:0:0:0,-10,-10 0/0:39.308:13:12:410:1:16:0,-1.19945,-10 0/0:83.6794:20:20:713:0:0:0,-6.0206,-10 0/0:56.5868:11:11:391:0:0:0,-3.31133,-10 0/0:62.6074:13:13:431:0:0:0,-3.91339,-10 0/0:71.6383:16:16:537:0:0:0,-4.81648,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/1:0.000364069:11:0:0:11:416:-10,-3.31133,0 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:62.6074:13:13:493:0:0:0,-3.91339,-10 0/0:89.6996:22:22:829:0:0:0,-6.62266,-10 0/0:86.6895:21:21:708:0:0:0,-6.32163,-10 0/0:83.6794:20:20:718:0:0:0,-6.0206,-10 0/0:56.5868:11:11:393:0:0:0,-3.31133,-10 0/1:99:25:12:452:13:482:-10,0,-10 0/0:65.6177:14:14:455:0:0:0,-4.21442,-10 0/0:65.6177:14:14:527:0:0:0,-4.21442,-10 0/0:99:26:26:985:0:0:0,-7.82678,-10 0/0:99:30:30:1074:0:0:0,-9.0309,-10 0/0:53.5765:10:10:376:0:0:0,-3.0103,-10 0/0:99:45:45:1619:0:0:0,-10,-10 0/0:80.6691:19:19:691:0:0:0,-5.71957,-10 0/0:74.6486:17:17:636:0:0:0,-5.11751,-10 0/0:59.5971:12:12:432:0:0:0,-3.61236,-10 0/0:53.5765:10:10:380:0:0:0,-3.0103,-10 0/0:62.6074:13:13:478:0:0:0,-3.91339,-10 0/0:99:41:41:1523:0:0:0,-10,-10 0/0:99:27:27:946:0:0:0,-8.12781,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:99:29:29:1032:0:0:0,-8.72987,-10 0/0:89.6996:22:22:786:0:0:0,-6.62266,-10 0/0:38.525:5:5:190:0:0:0,-1.50515,-10 0/0:86.6895:21:21:758:0:0:0,-6.32163,-10 0/0:47.4371:16:15:543:1:16:0,-2.01236,-10 0/0:62.6074:13:13:468:0:0:0,-3.91339,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:95.7189:24:24:876:0:0:0,-7.22472,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 scaffold_93 477042 . C T 80.3467 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=5;CIGAR=1X;DP=1243;DPB=1243;DPRA=0.738037;EPP=3.44459;EPPR=4.48901;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9798;NS=92;NUMALT=1;ODDS=10.5958;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=177;QR=44943;RO=1235;RPP=13.8677;RPPR=2684.78;RUN=1;SAF=2;SAP=3.44459;SAR=3;SRF=632;SRP=4.48901;SRR=603;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.0691:7:7:241:0:0:0,-2.10721,-10 0/0:70.1:10:10:378:0:0:0,-3.0103,-10 0/0:85.1514:15:15:539:0:0:0,-4.51545,-10 0/0:70.1:10:10:357:0:0:0,-3.0103,-10 0/0:73.1103:11:11:409:0:0:0,-3.31133,-10 0/0:88.1615:16:16:604:0:0:0,-4.81648,-10 0/0:99:24:24:886:0:0:0,-7.22472,-10 0/0:99:24:24:848:0:0:0,-7.22472,-10 0/0:73.1103:11:11:396:0:0:0,-3.31133,-10 0/0:52.0382:4:4:142:0:0:0,-1.20412,-10 0/0:55.0485:5:5:157:0:0:0,-1.50515,-10 0/0:46.0176:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:20:20:717:0:0:0,-6.0206,-10 0/0:91.1716:17:17:604:0:0:0,-5.11751,-10 0/0:99:23:23:848:0:0:0,-6.92369,-10 0/0:94.1826:18:18:612:0:0:0,-5.41854,-10 0/0:94.1826:18:18:656:0:0:0,-5.41854,-10 0/0:67.0897:9:9:288:0:0:0,-2.70927,-10 0/0:79.1309:13:13:481:0:0:0,-3.91339,-10 0/0:99:27:27:976:0:0:0,-8.12781,-10 0/0:79.1309:13:13:472:0:0:0,-3.91339,-10 0/0:99:24:24:865:0:0:0,-7.22472,-10 0/0:76.1206:12:12:450:0:0:0,-3.61236,-10 0/0:99:25:25:891:0:0:0,-7.52575,-10 0/0:76.1206:12:12:452:0:0:0,-3.61236,-10 0/0:70.1:10:10:367:0:0:0,-3.0103,-10 0/0:82.1411:14:14:517:0:0:0,-4.21442,-10 0/0:52.0382:4:4:152:0:0:0,-1.20412,-10 0/0:88.1615:16:16:604:0:0:0,-4.81648,-10 0/0:99:25:25:853:0:0:0,-7.52575,-10 0/0:61.0691:7:7:266:0:0:0,-2.10721,-10 0/0:46.0176:2:2:72:0:0:0,-0.60206,-6.84 0/0:67.0897:9:9:307:0:0:0,-2.70927,-10 0/0:64.0794:8:8:298:0:0:0,-2.40824,-10 0/0:67.0897:9:9:332:0:0:0,-2.70927,-10 0/0:55.0485:5:5:190:0:0:0,-1.50515,-10 0/0:79.1309:13:13:492:0:0:0,-3.91339,-10 0/0:67.0897:9:9:329:0:0:0,-2.70927,-10 0/0:64.0794:8:8:280:0:0:0,-2.40824,-10 0/0:82.1411:14:14:503:0:0:0,-4.21442,-10 0/0:91.1716:17:17:639:0:0:0,-5.11751,-10 0/0:88.1615:16:16:603:0:0:0,-4.81648,-10 0/0:70.1:10:10:357:0:0:0,-3.0103,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:79.1309:13:13:442:0:0:0,-3.91339,-10 0/0:99:22:22:821:0:0:0,-6.62266,-10 0/0:99:26:26:953:0:0:0,-7.82678,-10 0/0:91.1716:18:17:641:0:0:0,-5.11751,-10 0/0:82.1411:14:14:530:0:0:0,-4.21442,-10 0/0:94.1826:18:18:683:0:0:0,-5.41854,-10 0/0:64.0794:9:8:293:0:0:0,-2.40824,-10 0/0:85.1514:15:15:544:0:0:0,-4.51545,-10 0/0:70.1:10:10:377:0:0:0,-3.0103,-10 0/0:49.0279:3:3:113:0:0:0,-0.90309,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:73.1103:11:11:417:0:0:0,-3.31133,-10 0/0:85.1514:15:15:558:0:0:0,-4.51545,-10 0/0:64.0794:8:8:278:0:0:0,-2.40824,-10 0/0:70.1:10:10:375:0:0:0,-3.0103,-10 0/0:64.0794:8:8:296:0:0:0,-2.40824,-10 0/0:99:22:22:801:0:0:0,-6.62266,-10 0/0:76.1206:12:12:391:0:0:0,-3.61236,-10 0/0:91.1716:17:17:613:0:0:0,-5.11751,-10 0/1:80.3467:10:5:184:5:177:-10,0,-10 0/0:58.0588:6:6:213:0:0:0,-1.80618,-10 0/0:99:29:29:1071:0:0:0,-8.72987,-10 0/0:85.1514:15:15:536:0:0:0,-4.51545,-10 0/0:70.1:10:10:374:0:0:0,-3.0103,-10 0/0:94.1826:18:18:631:0:0:0,-5.41854,-10 0/0:64.0794:8:8:304:0:0:0,-2.40824,-10 0/0:67.0897:9:9:319:0:0:0,-2.70927,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:91.1716:17:17:626:0:0:0,-5.11751,-10 0/0:61.0691:7:7:244:0:0:0,-2.10721,-10 0/0:94.1826:18:18:656:0:0:0,-5.41854,-10 0/0:64.0794:8:8:302:0:0:0,-2.40824,-10 0/0:73.1103:11:11:391:0:0:0,-3.31133,-10 0/0:70.1:10:10:348:0:0:0,-3.0103,-10 0/0:49.0279:3:3:114:0:0:0,-0.90309,-10 0/0:61.0691:7:7:253:0:0:0,-2.10721,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:99:20:20:718:0:0:0,-6.0206,-10 0/0:70.1:10:10:352:0:0:0,-3.0103,-10 0/0:76.1206:13:12:425:0:0:0,-3.61236,-10 0/0:88.1615:16:16:575:0:0:0,-4.81648,-10 0/0:58.0588:6:6:227:0:0:0,-1.80618,-10 0/0:82.1411:14:14:522:0:0:0,-4.21442,-10 0/0:70.1:10:10:362:0:0:0,-3.0103,-10 0/0:46.0176:2:2:76:0:0:0,-0.60206,-7.22 0/0:88.1615:16:16:596:0:0:0,-4.81648,-10 0/0:85.1514:15:15:538:0:0:0,-4.51545,-10 0/0:88.1615:16:16:593:0:0:0,-4.81648,-10 scaffold_93 534125 . C T 25044.8 . AB=0.523322;ABP=7.16302;AC=71;AF=0.38587;AN=184;AO=880;CIGAR=1X;DP=2271;DPB=2271;DPRA=1.177;EPP=6.20829;EPPR=3.01656;GTI=1;LEN=1;MEANALT=1.02041;MQM=59.9125;MQMR=59.9849;NS=92;NUMALT=1;ODDS=0.654886;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=31923;QR=50289;RO=1388;RPP=1913.91;RPPR=3008.33;RUN=1;SAF=458;SAP=6.20829;SAR=422;SRF=692;SRP=3.03533;SRR=696;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:83.0708:29:0:0:29:1055:-10,-8.72987,0 1/1:31.8959:12:0:0:12:424:-10,-3.61236,0 0/1:99:31:18:646:13:481:-10,0,-10 0/0:38.2188:12:12:419:0:0:0,-3.61236,-10 0/1:99:12:5:185:7:256:-10,0,-10 0/0:68.3218:22:22:813:0:0:0,-6.62266,-10 0/0:99:39:39:1433:0:0:0,-10,-10 0/1:99:33:17:592:16:527:-10,0,-10 0/0:62.3012:20:20:696:0:0:0,-6.0206,-10 0/1:1.4009:2:0:0:2:76:-7.22,-0.60206,0 1/1:28.8856:11:0:0:11:410:-10,-3.31133,0 1/1:16.8444:7:0:0:7:250:-10,-2.10721,0 0/1:99:45:24:888:21:734:-10,0,-10 0/1:99:45:25:900:20:702:-10,0,-10 1/1:98.1221:34:0:0:34:1248:-10,-10,0 0/0:99:46:46:1602:0:0:0,-10,-10 0/0:68.3218:22:22:813:0:0:0,-6.62266,-10 1/1:31.8959:12:0:0:12:432:-10,-3.61236,0 0/1:99:21:9:336:12:445:-10,0,-10 0/1:99:72:31:1127:41:1545:-10,0,-10 0/1:99:21:10:379:11:347:-10,0,-10 0/0:99:44:44:1653:0:0:0,-10,-10 0/0:32.1982:10:10:370:0:0:0,-3.0103,-10 0/1:99:25:10:371:15:561:-10,0,-10 0/0:99:33:33:1195:0:0:0,-9.93399,-10 0/1:99:34:17:625:17:620:-10,0,-10 1/1:55.9783:20:0:0:20:714:-10,-6.0206,0 0/0:38.2188:12:12:400:0:0:0,-3.61236,-10 1/1:61.9989:22:0:0:22:797:-10,-6.62266,0 0/1:99:40:19:639:21:737:-10,0,-10 1/1:22.865:9:0:0:9:337:-10,-2.70927,0 1/1:31.8959:12:0:0:12:394:-10,-3.61236,0 0/0:65.3115:21:21:753:0:0:0,-6.32163,-10 0/0:56.2806:18:18:621:0:0:0,-5.41854,-10 1/1:65.0092:23:0:0:23:838:-10,-6.92369,0 0/0:17.1467:5:5:185:0:0:0,-1.50515,-10 0/0:32.1982:10:10:365:0:0:0,-3.0103,-10 0/0:99:39:39:1451:0:0:0,-10,-10 0/0:80.3629:26:26:940:0:0:0,-7.82678,-10 0/1:99:21:13:441:8:297:-10,0,-10 1/1:99:41:0:0:41:1452:-10,-10,0 1/1:58.9886:21:0:0:21:749:-10,-6.32163,0 0/0:83.373:27:27:993:0:0:0,-8.12781,-10 0/1:99:38:20:700:18:663:-10,0,-10 0/0:68.3218:22:22:777:0:0:0,-6.62266,-10 0/1:99:20:10:379:10:350:-10,0,-10 0/1:99:56:24:895:32:1191:-10,0,-10 0/0:99:33:33:1155:0:0:0,-9.93399,-10 0/0:26.1776:8:8:281:0:0:0,-2.40824,-10 0/1:99:38:18:660:20:720:-10,0,-10 1/1:52.968:19:0:0:19:683:-10,-5.71957,0 0/1:99:52:25:888:27:1002:-10,0,-10 1/1:37.9165:14:0:0:14:492:-10,-4.21442,0 1/1:25.8753:11:0:0:10:351:-10,-3.0103,0 0/1:99:59:27:947:32:1191:-10,0,-10 0/0:59.2909:19:19:683:0:0:0,-5.71957,-10 0/0:77.3526:25:25:944:0:0:0,-7.52575,-10 0/0:26.1776:8:8:300:0:0:0,-2.40824,-10 0/0:65.3115:21:21:736:0:0:0,-6.32163,-10 0/0:77.3526:25:25:925:0:0:0,-7.52575,-10 1/1:92.1018:32:0:0:32:1171:-10,-9.63296,0 0/0:74.3424:24:24:881:0:0:0,-7.22472,-10 0/1:99:42:23:870:19:682:-10,0,-10 0/1:99:34:13:457:21:747:-10,0,-10 0/0:26.1776:8:8:301:0:0:0,-2.40824,-10 0/1:99:25:17:639:8:293:-10,0,-10 0/1:99:21:12:443:9:337:-10,0,-10 1/1:49.9577:18:0:0:18:653:-10,-5.41854,0 0/0:99:40:40:1490:0:0:0,-10,-10 0/0:41.2291:13:13:467:0:0:0,-3.91339,-10 0/0:99:48:48:1710:0:0:0,-10,-10 0/0:99:36:35:1284:0:0:0,-10,-10 0/0:74.3424:25:24:875:0:0:0,-7.22472,-10 0/0:74.3424:24:24:870:0:0:0,-7.22472,-10 0/0:99:33:33:1207:0:0:0,-9.93399,-10 0/0:26.1776:8:8:267:0:0:0,-2.40824,-10 0/1:10.4505:16:1:38:15:562:-10,0,-0.18764 0/0:32.1982:10:10:380:0:0:0,-3.0103,-10 1/1:16.8444:7:0:0:7:247:-10,-2.10721,0 0/0:35.2085:11:11:392:0:0:0,-3.31133,-10 0/1:99:46:22:786:24:881:-10,0,-10 1/1:41.1505:31:1:36:30:1112:-10,-4.24057,0 0/0:62.3012:20:20:702:0:0:0,-6.0206,-10 1/1:61.9989:22:0:0:22:831:-10,-6.62266,0 0/0:98.4175:32:32:1145:0:0:0,-9.63296,-10 0/0:17.1467:5:5:186:0:0:0,-1.50515,-10 0/0:74.3424:24:24:897:0:0:0,-7.22472,-10 1/1:40.9268:15:0:0:15:565:-10,-4.51545,0 0/1:57.5267:13:2:76:11:417:-10,0,-5.1987 0/0:74.3424:24:24:876:0:0:0,-7.22472,-10 0/1:99:17:7:254:10:354:-10,0,-10 0/0:56.2806:18:18:659:0:0:0,-5.41854,-10 scaffold_93 585680 . C T 50260.6 . AB=0.445545;ABP=8.21323;AC=172;AF=0.945055;AN=182;AO=1686;CIGAR=1X;DP=1825;DPB=1825;DPRA=1.49646;EPP=3.34001;EPPR=3.77578;GTI=0;LEN=1;MEANALT=1;MQM=59.9786;MQMR=60;NS=91;NUMALT=1;ODDS=2.33134;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=61588;QR=5084;RO=139;RPP=3664.11;RPPR=304.845;RUN=1;SAF=835;SAP=3.34001;SAR=851;SRF=73;SRP=3.77578;SRR=66;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL .:.:.:.:.:.:.:. 1/1:47.7468:16:0:0:16:598:-10,-4.81648,0 1/1:35.7056:12:0:0:12:382:-10,-3.61236,0 0/0:16.1141:10:10:371:0:0:0,-3.0103,-10 1/1:71.8292:24:0:0:24:830:-10,-7.22472,0 1/1:35.7056:12:0:0:12:449:-10,-3.61236,0 1/1:68.8189:23:0:0:23:823:-10,-6.92369,0 1/1:74.8395:25:0:0:25:921:-10,-7.52575,0 1/1:53.7674:18:0:0:18:681:-10,-5.41854,0 1/1:32.6953:11:0:0:11:418:-10,-3.31133,0 1/1:23.6644:8:0:0:8:275:-10,-2.40824,0 1/1:11.6232:4:0:0:4:142:-10,-1.20412,0 1/1:99:35:0:0:35:1222:-10,-10,0 0/1:99:25:13:487:12:443:-10,0,-10 1/1:99:39:0:0:39:1389:-10,-10,0 1/1:92.9016:31:0:0:31:1140:-10,-9.33193,0 0/1:99:37:23:837:14:489:-10,0,-10 1/1:65.8086:22:0:0:22:793:-10,-6.62266,0 1/1:65.8086:22:0:0:22:826:-10,-6.62266,0 0/1:99:42:24:866:18:637:-10,0,-10 1/1:38.7159:13:0:0:13:438:-10,-3.91339,0 1/1:95.9083:32:0:0:32:1169:-10,-9.63296,0 1/1:80.86:27:0:0:27:973:-10,-8.12781,0 1/1:65.8086:22:0:0:22:826:-10,-6.62266,0 1/1:56.7777:19:0:0:19:721:-10,-5.71957,0 1/1:83.8702:28:0:0:28:1049:-10,-8.42884,0 1/1:50.7571:17:0:0:17:634:-10,-5.11751,0 1/1:26.6747:9:0:0:9:336:-10,-2.70927,0 1/1:65.8086:22:0:0:22:833:-10,-6.62266,0 1/1:99:34:0:0:34:1223:-10,-10,0 1/1:32.6953:11:0:0:11:386:-10,-3.31133,0 1/1:14.6335:5:0:0:5:190:-10,-1.50515,0 1/1:26.6747:9:0:0:9:335:-10,-2.70927,0 1/1:29.685:10:0:0:10:380:-10,-3.0103,0 1/1:56.7777:19:0:0:19:682:-10,-5.71957,0 1/1:20.6541:7:0:0:7:244:-10,-2.10721,0 1/1:38.7159:13:0:0:13:490:-10,-3.91339,0 0/1:99:31:15:530:16:583:-10,0,-10 1/1:53.7674:18:0:0:18:678:-10,-5.41854,0 1/1:35.7056:12:0:0:12:452:-10,-3.61236,0 1/1:68.8189:23:0:0:23:853:-10,-6.92369,0 1/1:53.7674:18:0:0:18:673:-10,-5.41854,0 1/1:44.7365:15:0:0:15:554:-10,-4.51545,0 1/1:56.7777:19:0:0:19:705:-10,-5.71957,0 1/1:59.788:20:0:0:20:760:-10,-6.0206,0 1/1:89.8911:30:0:0:30:1102:-10,-9.0309,0 1/1:92.9016:31:0:0:31:1118:-10,-9.33193,0 1/1:99:38:0:0:38:1386:-10,-10,0 1/1:38.7159:13:0:0:13:489:-10,-3.91339,0 1/1:83.8702:28:0:0:28:979:-10,-8.42884,0 1/1:35.7056:12:0:0:12:447:-10,-3.61236,0 1/1:99:38:0:0:38:1369:-10,-10,0 1/1:29.685:10:0:0:10:357:-10,-3.0103,0 1/1:17.6438:6:0:0:6:218:-10,-1.80618,0 1/1:99:54:0:0:54:1997:-10,-10,0 1/1:35.7056:12:0:0:12:430:-10,-3.61236,0 1/1:38.7159:13:0:0:13:481:-10,-3.91339,0 1/1:38.7159:13:0:0:13:490:-10,-3.91339,0 1/1:53.7674:18:0:0:18:652:-10,-5.41854,0 1/1:38.7159:13:0:0:13:480:-10,-3.91339,0 1/1:99:34:0:0:34:1264:-10,-10,0 1/1:29.685:10:0:0:10:348:-10,-3.0103,0 1/1:99:34:0:0:34:1241:-10,-10,0 1/1:44.7365:15:0:0:15:562:-10,-4.51545,0 1/1:14.6335:5:0:0:5:183:-10,-1.50515,0 0/1:99:38:18:665:20:720:-10,0,-10 1/1:62.7983:21:0:0:21:767:-10,-6.32163,0 1/1:20.6541:7:0:0:7:220:-10,-2.10721,0 1/1:74.8395:25:0:0:25:924:-10,-7.52575,0 1/1:38.7159:13:0:0:13:488:-10,-3.91339,0 1/1:59.788:20:0:0:20:753:-10,-6.0206,0 1/1:62.7983:21:0:0:21:797:-10,-6.32163,0 1/1:65.8086:22:0:0:22:799:-10,-6.62266,0 1/1:50.7571:17:0:0:17:630:-10,-5.11751,0 1/1:99:39:0:0:39:1398:-10,-10,0 1/1:47.7468:16:0:0:16:553:-10,-4.81648,0 0/0:37.1862:17:17:628:0:0:0,-5.11751,-10 1/1:53.7674:18:0:0:18:657:-10,-5.41854,0 1/1:11.6232:4:0:0:4:147:-10,-1.20412,0 1/1:26.6747:9:0:0:9:323:-10,-2.70927,0 1/1:99:34:0:0:34:1270:-10,-10,0 0/1:99:29:19:700:10:379:-10,0,-10 1/1:65.8086:22:0:0:22:809:-10,-6.62266,0 1/1:38.7159:13:0:0:13:469:-10,-3.91339,0 1/1:53.7674:18:0:0:18:659:-10,-5.41854,0 1/1:44.7365:15:0:0:15:570:-10,-4.51545,0 1/1:62.7983:21:0:0:21:756:-10,-6.32163,0 1/1:74.8395:25:0:0:25:907:-10,-7.52575,0 1/1:20.6541:7:0:0:7:243:-10,-2.10721,0 1/1:50.7571:17:0:0:17:620:-10,-5.11751,0 1/1:65.8086:22:0:0:22:808:-10,-6.62266,0 1/1:56.7777:19:0:0:19:704:-10,-5.71957,0 scaffold_93 653162 . A G 746.694 . AB=0.630435;ABP=9.80795;AC=2;AF=0.0108696;AN=184;AO=31;CIGAR=1X;DP=1410;DPB=1410;DPRA=1.51782;EPP=3.08035;EPPR=3.11115;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9702;NS=92;NUMALT=1;ODDS=3.13386;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1150;QR=50540;RO=1378;RPP=70.3259;RPPR=2891.98;RUN=1;SAF=16;SAP=3.08035;SAR=15;SRF=673;SRP=4.62393;SRR=705;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:26.3755:7:7:265:0:0:0,-2.10721,-10 0/0:26.3755:7:7:251:0:0:0,-2.10721,-10 0/0:38.4167:11:11:408:0:0:0,-3.31133,-10 0/0:38.4167:11:11:394:0:0:0,-3.31133,-10 0/0:32.3961:9:9:333:0:0:0,-2.70927,-10 0/0:26.3755:7:7:258:0:0:0,-2.10721,-10 0/0:99:36:36:1351:0:0:0,-10,-10 0/0:56.4785:17:17:621:0:0:0,-5.11751,-10 0/0:47.4476:14:14:529:0:0:0,-4.21442,-10 0/0:14.3343:3:3:113:0:0:0,-0.90309,-10 0/0:23.3652:6:6:228:0:0:0,-1.80618,-10 0/0:29.3858:8:8:303:0:0:0,-2.40824,-10 0/0:95.6121:30:30:1096:0:0:0,-9.0309,-10 0/0:59.4888:18:18:667:0:0:0,-5.41854,-10 0/0:47.4476:14:14:515:0:0:0,-4.21442,-10 0/0:47.4476:14:14:525:0:0:0,-4.21442,-10 0/0:59.4888:18:18:676:0:0:0,-5.41854,-10 0/0:32.3961:9:9:334:0:0:0,-2.70927,-10 0/0:65.5094:20:20:746:0:0:0,-6.0206,-10 0/0:83.5712:26:26:962:0:0:0,-7.82678,-10 0/0:71.53:22:22:770:0:0:0,-6.62266,-10 0/0:71.53:22:22:785:0:0:0,-6.62266,-10 0/0:41.427:12:12:456:0:0:0,-3.61236,-10 0/0:35.4064:10:10:380:0:0:0,-3.0103,-10 0/0:59.4888:18:18:648:0:0:0,-5.41854,-10 0/0:68.5197:21:21:783:0:0:0,-6.32163,-10 0/0:44.4373:13:13:493:0:0:0,-3.91339,-10 0/0:32.3961:9:9:333:0:0:0,-2.70927,-10 0/0:41.427:12:12:444:0:0:0,-3.61236,-10 0/0:50.4579:15:15:552:0:0:0,-4.51545,-10 0/0:29.3858:8:8:295:0:0:0,-2.40824,-10 0/0:41.427:12:12:455:0:0:0,-3.61236,-10 0/0:50.4579:16:15:569:0:0:0,-4.51545,-10 0/0:29.3858:8:8:297:0:0:0,-2.40824,-10 0/0:44.4373:13:13:494:0:0:0,-3.91339,-10 0/0:29.3858:8:8:304:0:0:0,-2.40824,-10 0/0:44.4373:13:13:469:0:0:0,-3.91339,-10 0/0:62.4991:19:19:692:0:0:0,-5.71957,-10 0/0:44.4373:13:13:489:0:0:0,-3.91339,-10 0/0:41.427:12:12:422:0:0:0,-3.61236,-10 0/0:89.5918:28:28:1055:0:0:0,-8.42884,-10 0/0:77.5506:24:24:793:0:0:0,-7.22472,-10 0/0:38.4167:11:11:380:0:0:0,-3.31133,-10 0/0:77.5506:24:24:864:0:0:0,-7.22472,-10 0/0:65.5094:20:20:751:0:0:0,-6.0206,-10 0/0:38.4167:11:11:395:0:0:0,-3.31133,-10 0/0:99:34:34:1278:0:0:0,-10,-10 0/0:50.4579:15:15:542:0:0:0,-4.51545,-10 0/0:44.4373:13:13:461:0:0:0,-3.91339,-10 0/0:60.1545:26:25:882:1:14:0,-5.01181,-10 0/0:35.4064:10:10:367:0:0:0,-3.0103,-10 0/0:80.5609:25:25:908:0:0:0,-7.52575,-10 0/0:35.4064:10:10:379:0:0:0,-3.0103,-10 0/0:20.3549:5:5:177:0:0:0,-1.50515,-10 0/0:99:46:46:1674:0:0:0,-10,-10 0/0:26.3755:7:7:256:0:0:0,-2.10721,-10 0/0:74.5403:23:23:838:0:0:0,-6.92369,-10 0/0:32.3961:9:9:340:0:0:0,-2.70927,-10 0/0:59.4888:18:18:648:0:0:0,-5.41854,-10 0/0:29.3858:8:8:304:0:0:0,-2.40824,-10 0/0:71.53:22:22:819:0:0:0,-6.62266,-10 0/1:0.0480395:12:0:0:12:456:-10,-3.61236,0 0/0:65.5094:20:20:705:0:0:0,-6.0206,-10 0/0:59.4888:18:18:615:0:0:0,-5.41854,-10 0/0:35.4064:10:10:373:0:0:0,-3.0103,-10 0/0:71.53:22:22:818:0:0:0,-6.62266,-10 0/0:50.4579:15:15:568:0:0:0,-4.51545,-10 0/0:29.3858:8:8:300:0:0:0,-2.40824,-10 0/1:99:34:17:608:17:642:-10,0,-10 0/0:23.3652:6:6:225:0:0:0,-1.80618,-10 0/0:56.4785:17:17:641:0:0:0,-5.11751,-10 0/0:83.5712:26:26:980:0:0:0,-7.82678,-10 0/0:62.4991:19:19:678:0:0:0,-5.71957,-10 0/0:50.4579:15:15:546:0:0:0,-4.51545,-10 0/0:83.5712:26:26:971:0:0:0,-7.82678,-10 0/0:38.4167:11:11:368:0:0:0,-3.31133,-10 0/0:41.427:12:12:455:0:0:0,-3.61236,-10 0/0:35.4064:10:10:376:0:0:0,-3.0103,-10 0/0:32.3961:9:9:311:0:0:0,-2.70927,-10 0/0:32.3961:9:9:340:0:0:0,-2.70927,-10 0/0:65.5094:20:20:735:0:0:0,-6.0206,-10 0/0:15.884:19:18:665:1:38:0,-0.640816,-10 0/0:71.53:22:22:823:0:0:0,-6.62266,-10 0/0:38.4167:11:11:405:0:0:0,-3.31133,-10 0/0:53.4682:16:16:596:0:0:0,-4.81648,-10 0/0:35.4064:10:10:366:0:0:0,-3.0103,-10 0/0:44.4373:13:13:465:0:0:0,-3.91339,-10 0/0:32.3961:9:9:332:0:0:0,-2.70927,-10 0/0:14.3343:3:3:114:0:0:0,-0.90309,-10 0/0:29.3858:8:8:291:0:0:0,-2.40824,-10 0/0:56.4785:17:17:600:0:0:0,-5.11751,-10 0/0:44.4373:13:13:454:0:0:0,-3.91339,-10 scaffold_93 677995 . G A 982.799 . AB=0.487179;ABP=3.12166;AC=3;AF=0.0163043;AN=184;AO=38;CIGAR=1X;DP=2150;DPB=2150;DPRA=1.1168;EPP=8.7247;EPPR=16.6141;GTI=1;LEN=1;MEANALT=1;MQM=59.9211;MQMR=59.9673;NS=92;NUMALT=1;ODDS=7.66376;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1411;QR=77291;RO=2111;RPP=85.5263;RPPR=4586.99;RUN=1;SAF=14;SAP=8.7247;SAR=24;SRF=998;SRP=16.6141;SRR=1113;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.3708:11:11:416:0:0:0,-3.31133,-10 0/0:63.3914:13:13:489:0:0:0,-3.91339,-10 0/0:81.4531:19:19:719:0:0:0,-5.71957,-10 0/0:54.3605:10:10:378:0:0:0,-3.0103,-10 0/0:75.4326:17:17:642:0:0:0,-5.11751,-10 0/0:66.4017:14:14:527:0:0:0,-4.21442,-10 0/0:99:40:40:1490:0:0:0,-10,-10 0/0:99:25:25:944:0:0:0,-7.52575,-10 0/0:63.3914:13:13:459:0:0:0,-3.91339,-10 0/0:33.2884:3:3:110:0:0:0,-0.90309,-10 0/0:33.2884:3:3:114:0:0:0,-0.90309,-10 0/0:63.3914:13:13:452:0:0:0,-3.91339,-10 0/0:99:43:43:1571:0:0:0,-10,-10 0/0:99:47:47:1723:0:0:0,-10,-10 0/0:99:35:35:1290:0:0:0,-10,-10 0/0:99:26:26:966:0:0:0,-7.82678,-10 0/0:99:29:29:1091:0:0:0,-8.72987,-10 0/0:84.4633:20:20:735:0:0:0,-6.0206,-10 0/1:99:25:12:453:13:490:-10,0,-10 0/0:99:44:44:1634:0:0:0,-10,-10 0/0:96.5013:24:24:894:0:0:0,-7.22472,-10 0/0:99:33:33:1184:0:0:0,-9.93399,-10 0/0:42.3193:6:6:226:0:0:0,-1.80618,-10 0/0:90.4832:22:22:770:0:0:0,-6.62266,-10 0/0:99:25:25:881:0:0:0,-7.52575,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:90.4832:22:22:781:0:0:0,-6.62266,-10 0/1:0.000309085:9:0:0:9:336:-10,-2.70927,0 0/0:87.4734:21:21:793:0:0:0,-6.32163,-10 0/0:99:37:37:1331:0:0:0,-10,-10 0/0:48.3399:8:8:282:0:0:0,-2.40824,-10 0/0:45.3296:7:7:266:0:0:0,-2.10721,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:66.4017:14:14:530:0:0:0,-4.21442,-10 0/0:99:29:29:1055:0:0:0,-8.72987,-10 0/0:63.3914:13:13:489:0:0:0,-3.91339,-10 0/0:57.3708:11:11:395:0:0:0,-3.31133,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:99:26:26:945:0:0:0,-7.82678,-10 0/0:57.3708:11:11:405:0:0:0,-3.31133,-10 0/0:99:50:50:1767:0:0:0,-10,-10 0/0:90.4832:22:22:816:0:0:0,-6.62266,-10 0/0:81.4531:19:19:719:0:0:0,-5.71957,-10 0/0:99:39:39:1433:0:0:0,-10,-10 0/0:99:31:30:1079:0:0:0,-9.0309,-10 0/0:99:25:25:907:0:0:0,-7.52575,-10 0/0:99:42:42:1530:0:0:0,-10,-10 0/0:99:38:38:1361:0:0:0,-10,-10 0/0:87.4734:21:21:767:0:0:0,-6.32163,-10 0/0:99:53:53:1898:0:0:0,-10,-10 0/0:69.412:15:15:562:0:0:0,-4.51545,-10 0/1:99:44:28:1023:16:585:-10,0,-10 0/0:57.3708:11:11:416:0:0:0,-3.31133,-10 0/0:63.3914:13:13:492:0:0:0,-3.91339,-10 0/0:99:44:44:1651:0:0:0,-10,-10 0/0:69.412:15:15:533:0:0:0,-4.51545,-10 0/0:78.4428:18:18:657:0:0:0,-5.41854,-10 0/0:45.3296:7:7:262:0:0:0,-2.10721,-10 0/0:84.4633:20:20:754:0:0:0,-6.0206,-10 0/0:72.4223:16:16:605:0:0:0,-4.81648,-10 0/0:99:32:32:1211:0:0:0,-9.63296,-10 0/0:66.4017:14:14:506:0:0:0,-4.21442,-10 0/0:99:48:48:1793:0:0:0,-10,-10 0/0:93.4927:23:23:822:0:0:0,-6.92369,-10 0/0:63.3914:13:13:440:0:0:0,-3.91339,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:96.5013:24:24:891:0:0:0,-7.22472,-10 0/0:72.4223:16:16:570:0:0:0,-4.81648,-10 0/0:99:44:44:1587:0:0:0,-10,-10 0/0:60.3811:12:12:456:0:0:0,-3.61236,-10 0/0:99:30:30:1035:0:0:0,-9.0309,-10 0/0:93.4927:23:23:831:0:0:0,-6.92369,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:63.3914:13:13:483:0:0:0,-3.91339,-10 0/0:99:29:29:1062:0:0:0,-8.72987,-10 0/0:60.3811:12:12:419:0:0:0,-3.61236,-10 0/0:90.4832:22:22:794:0:0:0,-6.62266,-10 0/0:54.3605:10:10:356:0:0:0,-3.0103,-10 0/0:69.412:15:15:566:0:0:0,-4.51545,-10 0/0:99:25:25:897:0:0:0,-7.52575,-10 0/0:99:34:34:1240:0:0:0,-10,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:84.4633:20:20:738:0:0:0,-6.0206,-10 0/0:99:32:32:1110:0:0:0,-9.63296,-10 0/0:99:37:37:1361:0:0:0,-10,-10 0/0:57.3708:11:11:374:0:0:0,-3.31133,-10 0/0:99:26:26:941:0:0:0,-7.82678,-10 0/0:72.4223:16:16:587:0:0:0,-4.81648,-10 0/0:51.3502:9:9:340:0:0:0,-2.70927,-10 0/0:75.4326:17:17:637:0:0:0,-5.11751,-10 0/0:93.4927:23:23:836:0:0:0,-6.92369,-10 0/0:99:27:27:1002:0:0:0,-8.12781,-10 scaffold_93 678005 . C T 470.118 . AB=0.45;ABP=3.87889;AC=1;AF=0.00543478;AN=184;AO=19;CIGAR=1X;DP=2150;DPB=2150;DPRA=1.09338;EPP=3.12459;EPPR=19.4456;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9662;NS=92;NUMALT=1;ODDS=2.17384;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=709;QR=77363;RO=2131;RPP=44.2683;RPPR=4630.42;RUN=1;SAF=10;SAP=3.12459;SAR=9;SRF=1002;SRP=19.4456;SRR=1129;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.7727:11:11:413:0:0:0,-3.31133,-10 0/0:61.7933:13:13:441:0:0:0,-3.91339,-10 0/0:79.8551:19:19:719:0:0:0,-5.71957,-10 0/0:52.7624:10:10:380:0:0:0,-3.0103,-10 0/0:73.8345:17:17:637:0:0:0,-5.11751,-10 0/0:64.8036:14:14:524:0:0:0,-4.21442,-10 0/1:99:40:22:794:18:671:-10,0,-10 0/0:97.9135:25:25:870:0:0:0,-7.52575,-10 0/0:61.7933:13:13:456:0:0:0,-3.91339,-10 0/0:31.6903:3:3:107:0:0:0,-0.90309,-9.98667 0/0:31.6903:3:3:114:0:0:0,-0.90309,-10 0/0:61.7933:13:13:422:0:0:0,-3.91339,-10 0/0:99:43:43:1537:0:0:0,-10,-10 0/0:99:47:47:1679:0:0:0,-10,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:99:26:26:919:0:0:0,-7.82678,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:82.8653:20:20:742:0:0:0,-6.0206,-10 0/0:97.9135:25:25:931:0:0:0,-7.52575,-10 0/0:99:44:44:1565:0:0:0,-10,-10 0/0:94.9049:24:24:898:0:0:0,-7.22472,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:40.7212:6:6:223:0:0:0,-1.80618,-10 0/0:88.8856:22:22:775:0:0:0,-6.62266,-10 0/0:97.9135:25:25:873:0:0:0,-7.52575,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:88.8856:22:22:741:0:0:0,-6.62266,-10 0/0:49.7521:9:9:342:0:0:0,-2.70927,-10 0/0:85.8755:21:21:777:0:0:0,-6.32163,-10 0/0:99:37:37:1346:0:0:0,-10,-10 0/0:46.7418:8:8:297:0:0:0,-2.40824,-10 0/0:43.7315:7:7:261:0:0:0,-2.10721,-10 0/0:97.9135:25:25:924:0:0:0,-7.52575,-10 0/0:64.8036:14:14:530:0:0:0,-4.21442,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:61.7933:13:13:494:0:0:0,-3.91339,-10 0/0:55.7727:11:11:407:0:0:0,-3.31133,-10 0/0:99:30:30:1035:0:0:0,-9.0309,-10 0/0:99:26:26:892:0:0:0,-7.82678,-10 0/0:55.7727:11:11:404:0:0:0,-3.31133,-10 0/0:99:50:50:1799:0:0:0,-10,-10 0/0:88.8856:22:22:790:0:0:0,-6.62266,-10 0/0:79.8551:19:19:701:0:0:0,-5.71957,-10 0/0:99:39:39:1357:0:0:0,-10,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:97.9135:25:25:919:0:0:0,-7.52575,-10 0/0:99:42:42:1508:0:0:0,-10,-10 0/0:99:38:38:1333:0:0:0,-10,-10 0/0:85.8755:21:21:745:0:0:0,-6.32163,-10 0/0:99:53:53:1912:0:0:0,-10,-10 0/0:67.8139:15:15:560:0:0:0,-4.51545,-10 0/0:99:44:44:1618:0:0:0,-10,-10 0/0:55.7727:11:11:396:0:0:0,-3.31133,-10 0/0:61.7933:13:13:473:0:0:0,-3.91339,-10 0/0:99:44:44:1611:0:0:0,-10,-10 0/0:67.8139:15:15:555:0:0:0,-4.51545,-10 0/0:76.8448:18:18:672:0:0:0,-5.41854,-10 0/0:43.7315:7:7:265:0:0:0,-2.10721,-10 0/0:82.8653:20:20:751:0:0:0,-6.0206,-10 0/0:70.8242:16:16:559:0:0:0,-4.81648,-10 0/0:99:32:32:1199:0:0:0,-9.63296,-10 0/0:64.8036:14:14:530:0:0:0,-4.21442,-10 0/0:99:48:48:1779:0:0:0,-10,-10 0/0:91.8955:23:23:805:0:0:0,-6.92369,-10 0/0:61.7933:13:13:467:0:0:0,-3.91339,-10 0/0:99:37:37:1325:0:0:0,-10,-10 0/0:94.9049:24:24:900:0:0:0,-7.22472,-10 0/0:70.8242:16:16:573:0:0:0,-4.81648,-10 0/0:99:44:44:1631:0:0:0,-10,-10 0/0:58.783:12:12:454:0:0:0,-3.61236,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:91.8955:23:23:832:0:0:0,-6.92369,-10 0/0:99:28:28:1010:0:0:0,-8.42884,-10 0/0:61.7933:13:13:486:0:0:0,-3.91339,-10 0/0:99:29:29:1050:0:0:0,-8.72987,-10 0/0:58.783:12:12:451:0:0:0,-3.61236,-10 0/0:88.8856:22:22:785:0:0:0,-6.62266,-10 0/0:52.7624:10:10:355:0:0:0,-3.0103,-10 0/0:67.8139:15:15:550:0:0:0,-4.51545,-10 0/0:97.9135:25:25:927:0:0:0,-7.52575,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:82.8653:20:20:744:0:0:0,-6.0206,-10 0/0:99:32:32:1138:0:0:0,-9.63296,-10 0/0:99:37:37:1361:0:0:0,-10,-10 0/0:0.467048:11:10:345:1:38:-1.53006,0,-10 0/0:99:26:26:960:0:0:0,-7.82678,-10 0/0:70.8242:16:16:576:0:0:0,-4.81648,-10 0/0:49.7521:9:9:319:0:0:0,-2.70927,-10 0/0:73.8345:17:17:633:0:0:0,-5.11751,-10 0/0:91.8955:23:23:856:0:0:0,-6.92369,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 scaffold_93 862511 . T A 4013.04 . AB=0.509091;ABP=3.12874;AC=12;AF=0.0652174;AN=184;AO=151;CIGAR=1X;DP=1974;DPB=1974;DPRA=1.22822;EPP=9.35215;EPPR=3.69754;GTI=1;LEN=1;MEANALT=1.11111;MQM=59.9139;MQMR=59.9758;NS=92;NUMALT=1;ODDS=1.07267;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5454;QR=66652;RO=1820;RPP=330.903;RPPR=3946.41;RUN=1;SAF=86;SAP=9.35215;SAR=65;SRF=899;SRP=3.58777;SRR=921;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.5027:20:20:722:0:0:0,-6.0206,-10 0/0:30.3689:7:7:256:0:0:0,-2.10721,-10 0/0:42.4101:11:11:366:0:0:0,-3.31133,-10 0/0:63.4821:18:18:656:0:0:0,-5.41854,-10 0/0:54.4513:15:15:567:0:0:0,-4.51545,-10 0/0:33.3792:8:8:299:0:0:0,-2.40824,-10 0/0:99:41:41:1498:0:0:0,-10,-10 0/0:72.513:21:21:771:0:0:0,-6.32163,-10 0/0:63.4821:18:18:606:0:0:0,-5.41854,-10 0/0:33.3792:8:8:293:0:0:0,-2.40824,-10 0/0:48.4307:13:13:490:0:0:0,-3.91339,-10 0/0:33.3792:8:8:304:0:0:0,-2.40824,-10 0/0:93.5835:28:28:1052:0:0:0,-8.42884,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:72.513:21:21:783:0:0:0,-6.32163,-10 0/1:99:25:14:524:11:402:-10,0,-10 0/0:51.441:14:14:531:0:0:0,-4.21442,-10 0/0:39.3998:10:10:358:0:0:0,-3.0103,-10 0/0:84.554:25:25:919:0:0:0,-7.52575,-10 0/1:99:32:20:723:12:456:-10,0,-10 0/0:51.441:14:14:498:0:0:0,-4.21442,-10 0/0:99:43:43:1611:0:0:0,-10,-10 0/0:24.3483:5:5:188:0:0:0,-1.50515,-10 0/0:63.4821:18:18:659:0:0:0,-5.41854,-10 0/0:90.5752:27:27:995:0:0:0,-8.12781,-10 0/0:99:46:46:1635:0:0:0,-10,-10 0/0:69.5027:20:20:748:0:0:0,-6.0206,-10 0/0:57.4616:16:16:604:0:0:0,-4.81648,-10 0/0:87.5641:26:26:957:0:0:0,-7.82678,-10 0/0:99:32:32:1148:0:0:0,-9.63296,-10 0/0:33.3792:8:8:301:0:0:0,-2.40824,-10 0/0:36.3895:9:9:342:0:0:0,-2.70927,-10 1/1:64.3419:30:0:0:30:1045:-10,-9.0309,0 0/0:60.4719:17:17:623:0:0:0,-5.11751,-10 0/0:63.4821:18:18:677:0:0:0,-5.41854,-10 0/0:30.3689:7:7:266:0:0:0,-2.10721,-10 0/0:57.4616:16:16:574:0:0:0,-4.81648,-10 0/1:99:36:17:632:19:684:-10,0,-10 0/1:1.21339:13:0:0:12:418:-10,-3.61236,0 0/0:60.4719:17:17:572:0:0:0,-5.11751,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 1/1:37.2492:21:0:0:21:743:-10,-6.32163,0 0/0:45.4204:12:12:445:0:0:0,-3.61236,-10 0/0:99:39:39:1452:0:0:0,-10,-10 0/0:78.5336:23:23:846:0:0:0,-6.92369,-10 0/0:69.5027:20:20:724:0:0:0,-6.0206,-10 0/0:99:42:42:1559:0:0:0,-10,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:39.3998:10:10:377:0:0:0,-3.0103,-10 0/0:99:65:65:2347:0:0:0,-10,-10 0/0:57.4616:16:16:600:0:0:0,-4.81648,-10 0/0:99:36:36:1317:0:0:0,-10,-10 0/0:75.5233:22:22:827:0:0:0,-6.62266,-10 0/0:48.4307:13:13:485:0:0:0,-3.91339,-10 0/0:99:55:55:2004:0:0:0,-10,-10 0/0:57.4616:16:16:606:0:0:0,-4.81648,-10 0/0:99:34:34:1235:0:0:0,-10,-10 0/0:45.4204:12:12:449:0:0:0,-3.61236,-10 0/0:60.4719:17:17:601:0:0:0,-5.11751,-10 0/0:30.3689:8:7:266:0:0:0,-2.10721,-10 0/0:90.5752:27:27:967:0:0:0,-8.12781,-10 0/0:63.4821:18:18:653:0:0:0,-5.41854,-10 0/1:99:47:20:753:27:1006:-10,0,-10 0/0:78.5336:23:23:820:0:0:0,-6.92369,-10 0/0:48.4307:13:13:485:0:0:0,-3.91339,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:45.4204:12:12:455:0:0:0,-3.61236,-10 0/0:30.3689:7:7:260:0:0:0,-2.10721,-10 0/0:99:50:50:1825:0:0:0,-10,-10 0/0:48.4307:13:13:472:0:0:0,-3.91339,-10 0/0:87.5641:26:26:958:0:0:0,-7.82678,-10 0/0:72.513:21:21:791:0:0:0,-6.32163,-10 0/0:90.5752:27:27:968:0:0:0,-8.12781,-10 0/0:54.4513:15:15:561:0:0:0,-4.51545,-10 0/0:99:32:31:1137:0:0:0,-9.33193,-10 0/0:54.4513:15:15:536:0:0:0,-4.51545,-10 0/0:60.4719:17:17:634:0:0:0,-5.11751,-10 0/0:60.4719:17:17:642:0:0:0,-5.11751,-10 0/0:27.3586:6:6:228:0:0:0,-1.80618,-10 0/0:24.3483:5:5:168:0:0:0,-1.50515,-10 0/0:99:39:39:1417:0:0:0,-10,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:93.5835:28:28:1029:0:0:0,-8.42884,-10 0/0:60.4719:17:17:624:0:0:0,-5.11751,-10 0/0:87.5641:26:26:949:0:0:0,-7.82678,-10 0/0:18.3277:3:3:105:0:0:0,-0.90309,-9.8 0/0:45.4204:12:12:429:0:0:0,-3.61236,-10 0/0:54.4513:15:15:555:0:0:0,-4.51545,-10 0/0:21.338:4:4:127:0:0:0,-1.20412,-10 0/1:83.883:12:9:320:3:114:-9.37006,0,-10 0/0:84.554:25:25:891:0:0:0,-7.52575,-10 1/1:22.1977:16:0:0:16:586:-10,-4.81648,0 scaffold_93 904709 . G A 1068.15 . AB=0.519481;ABP=3.26411;AC=3;AF=0.0163043;AN=184;AO=40;CIGAR=1X;DP=1825;DPB=1825;DPRA=1.30683;EPP=3.0103;EPPR=3.06991;GTI=1;LEN=1;MEANALT=1;MQM=59.775;MQMR=59.9669;NS=92;NUMALT=1;ODDS=4.58915;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1501;QR=65529;RO=1785;RPP=89.8692;RPPR=3879.09;RUN=1;SAF=20;SAP=3.0103;SAR=20;SRF=896;SRP=3.06991;SRR=889;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.1947:20:20:736:0:0:0,-6.0206,-10 0/0:44.0917:10:10:376:0:0:0,-3.0103,-10 0/0:68.1741:18:18:671:0:0:0,-5.41854,-10 0/0:47.102:11:11:401:0:0:0,-3.31133,-10 0/0:41.0814:9:9:341:0:0:0,-2.70927,-10 0/0:50.1123:12:12:430:0:0:0,-3.61236,-10 0/0:99:48:48:1763:0:0:0,-10,-10 0/0:80.2153:22:22:829:0:0:0,-6.62266,-10 0/0:59.1432:15:15:520:0:0:0,-4.51545,-10 0/0:20.0093:2:2:72:0:0:0,-0.60206,-6.84 0/0:35.0608:7:7:263:0:0:0,-2.10721,-10 0/0:44.0917:10:10:374:0:0:0,-3.0103,-10 0/0:99:44:44:1537:0:0:0,-10,-10 0/0:89.246:25:25:873:0:0:0,-7.52575,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:98.2758:28:28:1050:0:0:0,-8.42884,-10 0/0:92.2562:26:26:946:0:0:0,-7.82678,-10 0/0:44.0917:10:10:378:0:0:0,-3.0103,-10 0/0:86.2358:24:24:896:0:0:0,-7.22472,-10 0/0:99:32:32:1163:0:0:0,-9.63296,-10 0/0:59.1432:15:15:550:0:0:0,-4.51545,-10 0/1:99:44:21:790:23:869:-10,0,-10 0/0:44.0917:10:10:380:0:0:0,-3.0103,-10 0/0:80.2153:22:22:800:0:0:0,-6.62266,-10 0/0:98.2758:28:28:974:0:0:0,-8.42884,-10 0/0:92.2562:26:26:956:0:0:0,-7.82678,-10 0/0:44.0917:10:10:356:0:0:0,-3.0103,-10 0/0:56.1329:14:14:522:0:0:0,-4.21442,-10 0/0:56.1329:14:14:529:0:0:0,-4.21442,-10 0/0:99:46:46:1690:0:0:0,-10,-10 0/0:29.0402:5:5:190:0:0:0,-1.50515,-10 0/0:38.0711:8:8:294:0:0:0,-2.40824,-10 0/0:68.1741:18:18:664:0:0:0,-5.41854,-10 0/0:41.0814:9:9:329:0:0:0,-2.70927,-10 0/0:53.1226:13:13:479:0:0:0,-3.91339,-10 0/1:0.00164435:8:0:0:8:302:-10,-2.40824,0 0/0:65.1638:17:17:624:0:0:0,-5.11751,-10 0/1:99:25:16:590:9:330:-10,0,-10 0/0:92.2562:26:26:945:0:0:0,-7.82678,-10 0/0:59.1432:15:15:551:0:0:0,-4.51545,-10 0/0:95.2662:27:27:1019:0:0:0,-8.12781,-10 0/0:71.1844:19:19:699:0:0:0,-5.71957,-10 0/0:56.1329:14:14:524:0:0:0,-4.21442,-10 0/0:99:40:40:1472:0:0:0,-10,-10 0/0:56.1329:14:14:489:0:0:0,-4.21442,-10 0/0:65.1638:17:17:641:0:0:0,-5.11751,-10 0/0:99:45:45:1672:0:0:0,-10,-10 0/0:86.2358:24:24:888:0:0:0,-7.22472,-10 0/0:44.0917:10:10:380:0:0:0,-3.0103,-10 0/0:99:43:43:1604:0:0:0,-10,-10 0/0:50.1123:12:12:414:0:0:0,-3.61236,-10 0/0:99:35:35:1304:0:0:0,-10,-10 0/0:47.102:11:11:378:0:0:0,-3.31133,-10 0/0:41.0814:9:9:332:0:0:0,-2.70927,-10 0/0:99:40:40:1477:0:0:0,-10,-10 0/0:38.0711:8:8:302:0:0:0,-2.40824,-10 0/0:86.2358:24:24:854:0:0:0,-7.22472,-10 0/0:29.0402:5:5:190:0:0:0,-1.50515,-10 0/0:56.1329:14:14:531:0:0:0,-4.21442,-10 0/0:68.1741:18:18:655:0:0:0,-5.41854,-10 0/0:99:30:30:1073:0:0:0,-9.0309,-10 0/0:65.1638:17:17:632:0:0:0,-5.11751,-10 0/0:99:32:32:1118:0:0:0,-9.63296,-10 0/0:59.1432:15:15:543:0:0:0,-4.51545,-10 0/0:47.102:11:11:394:0:0:0,-3.31133,-10 0/0:99:36:36:1313:0:0:0,-10,-10 0/0:68.1741:18:18:676:0:0:0,-5.41854,-10 0/0:38.0711:8:8:299:0:0:0,-2.40824,-10 0/0:77.205:21:21:773:0:0:0,-6.32163,-10 0/0:65.1638:17:17:614:0:0:0,-5.11751,-10 0/0:80.2153:22:22:778:0:0:0,-6.62266,-10 0/0:99:30:30:1125:0:0:0,-9.0309,-10 0/0:99:29:29:1076:0:0:0,-8.72987,-10 0/0:50.1123:12:12:454:0:0:0,-3.61236,-10 0/0:92.2562:26:26:927:0:0:0,-7.82678,-10 0/0:50.1123:12:12:451:0:0:0,-3.61236,-10 0/0:56.1329:14:14:523:0:0:0,-4.21442,-10 0/0:47.102:11:11:354:0:0:0,-3.31133,-10 0/0:35.0608:7:7:263:0:0:0,-2.10721,-10 0/0:35.0608:7:7:246:0:0:0,-2.10721,-10 0/0:99:37:37:1380:0:0:0,-10,-10 0/0:99:33:33:1244:0:0:0,-9.93399,-10 0/0:50.1123:12:12:456:0:0:0,-3.61236,-10 0/0:77.205:21:21:761:0:0:0,-6.32163,-10 0/0:71.1844:19:19:715:0:0:0,-5.71957,-10 0/0:26.0299:4:4:152:0:0:0,-1.20412,-10 0/0:99:31:31:1176:0:0:0,-9.33193,-10 0/0:65.1638:17:17:645:0:0:0,-5.11751,-10 0/0:32.0505:6:6:228:0:0:0,-1.80618,-10 0/0:65.1638:17:17:605:0:0:0,-5.11751,-10 0/0:89.246:25:25:927:0:0:0,-7.52575,-10 0/0:74.1947:20:20:747:0:0:0,-6.0206,-10 scaffold_93 904719 . G C 924.646 . AB=0.603448;ABP=8.40154;AC=2;AF=0.0108696;AN=184;AO=35;CIGAR=1X;DP=1826;DPB=1826;DPRA=1.47624;EPP=3.56868;EPPR=3.02973;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.939;NS=92;NUMALT=1;ODDS=2.26688;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1283;QR=65682;RO=1788;RPP=70.5741;RPPR=3833.66;RUN=1;SAF=17;SAP=3.07234;SAR=18;SRF=898;SRP=3.08803;SRR=890;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.7663:20:20:719:0:0:0,-6.0206,-10 0/0:34.6633:10:10:323:0:0:0,-3.0103,-10 0/0:58.7457:18:18:679:0:0:0,-5.41854,-10 0/0:37.6736:11:11:415:0:0:0,-3.31133,-10 0/0:31.653:9:9:342:0:0:0,-2.70927,-10 0/0:37.6736:12:11:399:0:0:0,-3.31133,-10 0/0:99:50:50:1784:0:0:0,-10,-10 0/0:70.7869:22:22:831:0:0:0,-6.62266,-10 0/0:49.7148:15:15:541:0:0:0,-4.51545,-10 0/0:10.5809:2:2:76:0:0:0,-0.60206,-7.22 0/0:25.6324:7:7:252:0:0:0,-2.10721,-10 0/0:34.6633:10:10:380:0:0:0,-3.0103,-10 0/0:99:44:44:1616:0:0:0,-10,-10 0/0:79.8178:25:25:905:0:0:0,-7.52575,-10 0/0:99:33:33:1229:0:0:0,-9.93399,-10 0/0:88.8481:28:28:1042:0:0:0,-8.42884,-10 0/0:82.8279:26:26:940:0:0:0,-7.82678,-10 0/0:34.6633:10:10:358:0:0:0,-3.0103,-10 0/0:76.8075:24:24:900:0:0:0,-7.22472,-10 0/0:99:32:32:1197:0:0:0,-9.63296,-10 0/0:49.7148:15:15:534:0:0:0,-4.51545,-10 0/0:99:43:43:1613:0:0:0,-10,-10 0/0:34.6633:10:10:369:0:0:0,-3.0103,-10 0/0:70.7869:22:22:832:0:0:0,-6.62266,-10 0/0:91.8579:29:29:1025:0:0:0,-8.72987,-10 0/0:82.8279:26:26:981:0:0:0,-7.82678,-10 0/0:34.6633:10:10:355:0:0:0,-3.0103,-10 0/0:49.7148:15:15:562:0:0:0,-4.51545,-10 0/0:46.7045:14:14:506:0:0:0,-4.21442,-10 0/0:99:46:46:1664:0:0:0,-10,-10 0/0:19.6118:5:5:188:0:0:0,-1.50515,-10 0/0:28.6427:8:8:300:0:0:0,-2.40824,-10 0/0:58.7457:18:18:674:0:0:0,-5.41854,-10 0/0:31.653:9:9:338:0:0:0,-2.70927,-10 0/0:43.6942:13:13:490:0:0:0,-3.91339,-10 0/0:28.6427:8:8:293:0:0:0,-2.40824,-10 0/0:55.7354:17:17:622:0:0:0,-5.11751,-10 0/0:79.8178:25:25:937:0:0:0,-7.52575,-10 0/0:82.8279:26:26:978:0:0:0,-7.82678,-10 0/0:49.7148:15:15:547:0:0:0,-4.51545,-10 0/0:85.8381:27:27:1006:0:0:0,-8.12781,-10 0/0:61.756:19:19:694:0:0:0,-5.71957,-10 0/0:46.7045:14:14:528:0:0:0,-4.21442,-10 0/0:99:40:40:1452:0:0:0,-10,-10 0/0:46.7045:14:14:522:0:0:0,-4.21442,-10 0/0:55.7354:17:17:646:0:0:0,-5.11751,-10 0/0:99:45:45:1675:0:0:0,-10,-10 0/0:76.8075:24:24:903:0:0:0,-7.22472,-10 0/0:34.6633:10:10:365:0:0:0,-3.0103,-10 0/0:99:43:43:1592:0:0:0,-10,-10 0/0:40.6839:12:12:432:0:0:0,-3.61236,-10 0/0:99:34:34:1291:0:0:0,-10,-10 0/0:37.6736:11:11:369:0:0:0,-3.31133,-10 0/0:31.653:9:9:337:0:0:0,-2.70927,-10 0/0:99:40:40:1463:0:0:0,-10,-10 0/0:28.6427:8:8:304:0:0:0,-2.40824,-10 0/0:76.8075:24:24:893:0:0:0,-7.22472,-10 0/0:19.6118:5:5:184:0:0:0,-1.50515,-10 0/0:46.7045:14:14:516:0:0:0,-4.21442,-10 0/0:58.7457:18:18:679:0:0:0,-5.41854,-10 0/0:94.867:30:30:1099:0:0:0,-9.0309,-10 0/0:55.7354:17:17:642:0:0:0,-5.11751,-10 0/0:99:32:32:1118:0:0:0,-9.63296,-10 0/0:49.7148:15:15:541:0:0:0,-4.51545,-10 0/0:37.6736:11:11:416:0:0:0,-3.31133,-10 0/0:99:36:36:1276:0:0:0,-10,-10 0/0:58.7457:18:18:658:0:0:0,-5.41854,-10 0/0:28.6427:8:8:289:0:0:0,-2.40824,-10 0/0:64.7663:21:20:692:0:0:0,-6.0206,-10 0/0:55.7354:17:17:635:0:0:0,-5.11751,-10 0/0:73.7972:23:23:803:0:0:0,-6.92369,-10 0/1:99:29:8:299:21:766:-10,0,-10 0/1:99:29:15:569:14:517:-10,0,-10 0/0:40.6839:12:12:453:0:0:0,-3.61236,-10 0/0:82.8279:26:26:949:0:0:0,-7.82678,-10 0/0:40.6839:12:12:427:0:0:0,-3.61236,-10 0/0:46.7045:14:14:493:0:0:0,-4.21442,-10 0/0:37.6736:11:11:403:0:0:0,-3.31133,-10 0/0:25.6324:7:7:266:0:0:0,-2.10721,-10 0/0:25.6324:7:7:242:0:0:0,-2.10721,-10 0/0:99:37:37:1387:0:0:0,-10,-10 0/0:99:33:33:1180:0:0:0,-9.93399,-10 0/0:40.6839:12:12:454:0:0:0,-3.61236,-10 0/0:67.7766:21:21:765:0:0:0,-6.32163,-10 0/0:58.7457:19:18:679:0:0:0,-5.41854,-10 0/0:16.6015:4:4:151:0:0:0,-1.20412,-10 0/0:94.867:30:30:1125:0:0:0,-9.0309,-10 0/0:55.7354:17:17:638:0:0:0,-5.11751,-10 0/0:22.6221:6:6:222:0:0:0,-1.80618,-10 0/0:55.7354:17:17:591:0:0:0,-5.11751,-10 0/0:79.8178:25:25:891:0:0:0,-7.52575,-10 0/0:64.7663:20:20:742:0:0:0,-6.0206,-10 scaffold_93 989969 . G C 953.63 . AB=0.558824;ABP=5.05404;AC=3;AF=0.0163043;AN=184;AO=38;CIGAR=1X;DP=1552;DPB=1552;DPRA=1.35939;EPP=5.06748;EPPR=18.5438;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9749;NS=92;NUMALT=1;ODDS=3.65205;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1384;QR=55193;RO=1512;RPP=85.5263;RPPR=3277.6;RUN=1;SAF=22;SAP=5.06748;SAR=16;SRF=807;SRP=17.9521;SRR=705;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.4503:17:17:583:0:0:0,-5.11751,-10 0/0:31.3473:7:7:264:0:0:0,-2.10721,-10 0/0:67.4709:19:19:687:0:0:0,-5.71957,-10 0/0:37.3679:9:9:336:0:0:0,-2.70927,-10 0/0:40.3782:10:10:376:0:0:0,-3.0103,-10 0/0:28.337:6:6:201:0:0:0,-1.80618,-10 0/1:99:35:21:742:14:527:-10,0,-10 0/0:58.44:16:16:596:0:0:0,-4.81648,-10 0/0:43.3885:11:11:407:0:0:0,-3.31133,-10 0/0:19.3061:3:3:109:0:0:0,-0.90309,-10 0/0:28.337:6:6:227:0:0:0,-1.80618,-10 0/0:25.3267:5:5:186:0:0:0,-1.50515,-10 0/0:99:33:33:1232:0:0:0,-9.93399,-10 0/0:99:35:35:1318:0:0:0,-10,-10 0/0:52.4194:14:14:519:0:0:0,-4.21442,-10 0/1:99:23:9:329:14:530:-10,0,-10 0/0:73.4914:21:21:769:0:0:0,-6.32163,-10 0/1:0.0154917:10:0:0:10:327:-10,-3.0103,0 0/0:82.5222:24:24:885:0:0:0,-7.22472,-10 0/0:99:43:43:1577:0:0:0,-10,-10 0/0:34.3576:8:8:301:0:0:0,-2.40824,-10 0/0:79.512:23:23:855:0:0:0,-6.92369,-10 0/0:25.3267:5:5:189:0:0:0,-1.50515,-10 0/0:55.4297:15:15:554:0:0:0,-4.51545,-10 0/0:52.4194:14:14:525:0:0:0,-4.21442,-10 0/0:73.4914:21:21:758:0:0:0,-6.32163,-10 0/0:52.4194:14:14:520:0:0:0,-4.21442,-10 0/0:49.4091:13:13:482:0:0:0,-3.91339,-10 0/0:46.3988:12:12:424:0:0:0,-3.61236,-10 0/0:85.5326:25:25:920:0:0:0,-7.52575,-10 0/0:16.2958:2:2:76:0:0:0,-0.60206,-7.22 0/0:25.3267:5:5:181:0:0:0,-1.50515,-10 0/0:58.44:16:16:600:0:0:0,-4.81648,-10 0/0:19.3061:3:3:92:0:0:0,-0.90309,-8.58667 0/0:55.4297:15:15:524:0:0:0,-4.51545,-10 0/0:28.337:6:6:214:0:0:0,-1.80618,-10 0/0:52.4194:14:14:485:0:0:0,-4.21442,-10 0/0:67.4709:19:19:718:0:0:0,-5.71957,-10 0/0:70.4812:20:20:732:0:0:0,-6.0206,-10 0/0:46.3988:12:12:410:0:0:0,-3.61236,-10 0/0:91.5531:27:27:1017:0:0:0,-8.12781,-10 0/0:61.4503:17:17:592:0:0:0,-5.11751,-10 0/0:49.4091:13:13:487:0:0:0,-3.91339,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/0:64.4606:18:18:650:0:0:0,-5.41854,-10 0/0:40.3782:10:10:358:0:0:0,-3.0103,-10 0/0:99:42:42:1561:0:0:0,-10,-10 0/0:67.4709:19:19:710:0:0:0,-5.71957,-10 0/0:31.3473:7:7:259:0:0:0,-2.10721,-10 0/0:99:38:38:1341:0:0:0,-10,-10 0/0:46.3988:12:12:454:0:0:0,-3.61236,-10 0/0:99:38:38:1364:0:0:0,-10,-10 0/0:58.44:16:16:595:0:0:0,-4.81648,-10 0/0:22.3164:4:4:152:0:0:0,-1.20412,-10 0/0:99:48:48:1769:0:0:0,-10,-10 0/0:49.4091:13:13:482:0:0:0,-3.91339,-10 0/0:64.4606:18:18:646:0:0:0,-5.41854,-10 0/0:31.3473:7:7:244:0:0:0,-2.10721,-10 0/0:61.4503:17:17:641:0:0:0,-5.11751,-10 0/0:43.3885:11:11:383:0:0:0,-3.31133,-10 0/0:85.5326:25:25:892:0:0:0,-7.52575,-10 0/0:64.4606:18:18:660:0:0:0,-5.41854,-10 0/0:99:37:37:1373:0:0:0,-10,-10 0/0:43.3885:11:11:412:0:0:0,-3.31133,-10 0/0:55.4297:15:15:554:0:0:0,-4.51545,-10 0/0:76.5017:22:22:804:0:0:0,-6.62266,-10 0/0:43.3885:11:11:411:0:0:0,-3.31133,-10 0/0:49.4091:14:13:468:0:0:0,-3.91339,-10 0/0:99:35:35:1240:0:0:0,-10,-10 0/0:43.3885:11:11:394:0:0:0,-3.31133,-10 0/0:58.44:16:16:570:0:0:0,-4.81648,-10 0/0:99:30:30:1063:0:0:0,-9.0309,-10 0/0:64.4606:18:18:645:0:0:0,-5.41854,-10 0/0:55.4297:16:15:520:0:0:0,-4.51545,-10 0/0:94.5633:28:28:1042:0:0:0,-8.42884,-10 0/0:46.3988:12:12:453:0:0:0,-3.61236,-10 0/0:22.3164:4:4:148:0:0:0,-1.20412,-10 0/0:46.3988:12:12:393:0:0:0,-3.61236,-10 0/0:28.337:6:6:220:0:0:0,-1.80618,-10 0/0:52.4194:14:14:503:0:0:0,-4.21442,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:76.5017:22:22:797:0:0:0,-6.62266,-10 0/0:67.4709:19:19:691:0:0:0,-5.71957,-10 0/0:58.44:16:16:605:0:0:0,-4.81648,-10 0/0:73.4914:21:21:764:0:0:0,-6.32163,-10 0/0:25.3267:5:5:179:0:0:0,-1.50515,-10 0/0:55.4297:15:15:541:0:0:0,-4.51545,-10 0/0:49.4091:13:13:472:0:0:0,-3.91339,-10 0/0:19.3061:3:3:114:0:0:0,-0.90309,-10 0/0:46.3988:12:12:445:0:0:0,-3.61236,-10 0/0:34.3576:8:8:303:0:0:0,-2.40824,-10 0/0:58.44:16:16:595:0:0:0,-4.81648,-10 scaffold_93 990006 . C T 999.155 . AB=0.75;ABP=31.2394;AC=3;AF=0.0163043;AN=184;AO=40;CIGAR=1X;DP=1588;DPB=1588;DPRA=1.33734;EPP=3.0103;EPPR=19.7089;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9696;NS=92;NUMALT=1;ODDS=1.967;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1470;QR=56446;RO=1545;RPP=81.4005;RPPR=2978.45;RUN=1;SAF=19;SAP=3.22745;SAR=21;SRF=810;SRP=10.9161;SRR=735;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.5133:17:17:610:0:0:0,-5.11751,-10 0/0:31.4103:7:7:266:0:0:0,-2.10721,-10 0/0:70.5442:20:20:721:0:0:0,-6.0206,-10 0/0:37.4309:9:9:342:0:0:0,-2.70927,-10 0/0:40.4412:10:10:378:0:0:0,-3.0103,-10 0/0:34.4206:8:8:304:0:0:0,-2.40824,-10 0/0:99:35:35:1249:0:0:0,-10,-10 0/0:61.5133:17:17:597:0:0:0,-5.11751,-10 0/0:43.4515:11:11:416:0:0:0,-3.31133,-10 0/0:19.3691:3:3:111:0:0:0,-0.90309,-10 0/0:28.4:6:6:225:0:0:0,-1.80618,-10 0/0:25.3897:5:5:189:0:0:0,-1.50515,-10 0/0:99:34:34:1276:0:0:0,-10,-10 0/0:99:35:35:1243:0:0:0,-10,-10 0/0:52.4824:14:14:524:0:0:0,-4.21442,-10 0/0:88.6058:26:26:943:0:0:0,-7.82678,-10 0/0:76.5648:22:22:807:0:0:0,-6.62266,-10 0/0:40.4412:10:10:370:0:0:0,-3.0103,-10 0/0:82.5854:24:24:864:0:0:0,-7.22472,-10 0/0:99:45:44:1650:0:0:0,-10,-10 0/0:40.4412:10:10:367:0:0:0,-3.0103,-10 0/0:82.5854:24:24:906:0:0:0,-7.22472,-10 0/0:25.3897:5:5:190:0:0:0,-1.50515,-10 0/0:55.4927:15:15:565:0:0:0,-4.51545,-10 0/0:52.4824:14:14:522:0:0:0,-4.21442,-10 0/0:73.5545:21:21:727:0:0:0,-6.32163,-10 0/0:52.4824:14:14:532:0:0:0,-4.21442,-10 0/0:49.4721:13:13:489:0:0:0,-3.91339,-10 0/0:46.4618:12:12:428:0:0:0,-3.61236,-10 0/0:85.5956:25:25:923:0:0:0,-7.52575,-10 0/0:16.3588:2:2:76:0:0:0,-0.60206,-7.22 0/0:25.3897:5:5:188:0:0:0,-1.50515,-10 0/0:61.5133:17:17:603:0:0:0,-5.11751,-10 0/0:19.3691:3:3:112:0:0:0,-0.90309,-10 0/0:55.4927:15:15:530:0:0:0,-4.51545,-10 0/0:31.4103:7:7:237:0:0:0,-2.10721,-10 0/0:55.4927:15:15:531:0:0:0,-4.51545,-10 0/0:67.5339:19:19:707:0:0:0,-5.71957,-10 0/0:70.5442:20:20:737:0:0:0,-6.0206,-10 0/0:46.4618:12:12:434:0:0:0,-3.61236,-10 0/0:91.616:27:27:1010:0:0:0,-8.12781,-10 0/0:61.5133:17:17:617:0:0:0,-5.11751,-10 0/0:49.4721:13:13:446:0:0:0,-3.91339,-10 0/0:99:32:31:1133:0:0:0,-9.33193,-10 0/0:64.5236:18:18:680:0:0:0,-5.41854,-10 0/0:43.4515:11:11:413:0:0:0,-3.31133,-10 0/0:99:44:44:1628:0:0:0,-10,-10 0/0:67.5339:19:19:718:0:0:0,-5.71957,-10 0/0:40.4412:10:10:374:0:0:0,-3.0103,-10 0/0:99:39:39:1414:0:0:0,-10,-10 0/0:46.4618:12:12:441:0:0:0,-3.61236,-10 0/0:77.5894:39:38:1341:1:38:0,-6.34911,-10 0/0:58.503:16:16:583:0:0:0,-4.81648,-10 0/0:25.3897:5:5:178:0:0:0,-1.50515,-10 0/0:99:48:48:1776:0:0:0,-10,-10 0/0:49.4721:13:13:491:0:0:0,-3.91339,-10 0/0:67.5339:19:19:645:0:0:0,-5.71957,-10 0/0:31.4103:7:7:252:0:0:0,-2.10721,-10 0/0:61.5133:17:17:611:0:0:0,-5.11751,-10 0/0:43.4515:11:11:392:0:0:0,-3.31133,-10 0/1:99:26:9:303:17:645:-10,0,-10 0/0:64.5236:18:18:668:0:0:0,-5.41854,-10 0/0:99:37:37:1358:0:0:0,-10,-10 0/1:99:11:4:147:7:261:-10,0,-10 0/0:55.4927:15:15:565:0:0:0,-4.51545,-10 0/0:76.5648:22:22:779:0:0:0,-6.62266,-10 0/0:43.4515:11:11:418:0:0:0,-3.31133,-10 0/1:0.517343:15:0:0:15:526:-10,-4.51545,0 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:43.4515:11:11:408:0:0:0,-3.31133,-10 0/0:58.503:16:16:596:0:0:0,-4.81648,-10 0/0:99:30:30:1043:0:0:0,-9.0309,-10 0/0:64.5236:18:18:675:0:0:0,-5.41854,-10 0/0:58.503:16:16:567:0:0:0,-4.81648,-10 0/0:97.6355:29:29:1096:0:0:0,-8.72987,-10 0/0:46.4618:12:12:453:0:0:0,-3.61236,-10 0/0:22.3794:4:4:152:0:0:0,-1.20412,-10 0/0:46.4618:12:12:394:0:0:0,-3.61236,-10 0/0:28.4:6:6:225:0:0:0,-1.80618,-10 0/0:52.4824:14:14:525:0:0:0,-4.21442,-10 0/0:99:36:36:1286:0:0:0,-10,-10 0/0:73.5545:22:21:732:0:0:0,-6.32163,-10 0/0:70.5442:20:20:707:0:0:0,-6.0206,-10 0/0:58.503:16:16:606:0:0:0,-4.81648,-10 0/0:73.5545:21:21:775:0:0:0,-6.32163,-10 0/0:25.3897:5:5:183:0:0:0,-1.50515,-10 0/0:55.4927:15:15:558:0:0:0,-4.51545,-10 0/0:49.4721:13:13:485:0:0:0,-3.91339,-10 0/0:19.3691:3:3:113:0:0:0,-0.90309,-10 0/0:46.4618:12:12:435:0:0:0,-3.61236,-10 0/0:34.4206:8:8:300:0:0:0,-2.40824,-10 0/0:58.503:16:16:585:0:0:0,-4.81648,-10 scaffold_93 990029 . C T 30358 . AB=0.457421;ABP=9.48245;AC=130;AF=0.706522;AN=184;AO=1047;CIGAR=1X;DP=1578;DPB=1578;DPRA=1.03172;EPP=4.52224;EPPR=9.59052;GTI=2;LEN=1;MEANALT=1.0411;MQM=59.9561;MQMR=59.9811;NS=92;NUMALT=1;ODDS=0.00997456;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=38136;QR=19141;RO=528;RPP=2250.56;RPPR=1149.55;RUN=1;SAF=534;SAP=3.92493;SAR=513;SRF=284;SRP=9.59052;SRR=244;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.098953:17:16:596:1:38:0,-0.087061,-10 1/1:20.5739:7:0:0:7:258:-10,-2.10721,0 0/1:99:20:7:265:12:449:-10,0,-10 1/1:26.5945:9:0:0:9:340:-10,-2.70927,0 0/1:99:10:7:264:3:114:-9.70888,0,-10 1/1:23.5842:8:0:0:8:299:-10,-2.40824,0 0/1:99:35:14:527:21:747:-10,0,-10 0/1:99:17:11:412:6:212:-10,0,-10 1/1:32.6151:11:0:0:11:414:-10,-3.31133,0 1/1:8.53274:3:0:0:3:114:-10,-0.90309,0 1/1:17.5636:6:0:0:6:228:-10,-1.80618,0 1/1:14.5533:5:0:0:5:168:-10,-1.50515,0 0/1:99:34:14:484:20:749:-10,0,-10 0/1:99:35:23:830:12:437:-10,0,-10 1/1:41.646:14:0:0:14:476:-10,-4.21442,0 0/1:99:26:16:570:10:375:-10,0,-10 1/1:14.8402:20:1:36:19:674:-10,-1.11957,0 0/0:28.7813:10:10:370:0:0:0,-3.0103,-10 0/0:70.9255:24:24:848:0:0:0,-7.22472,-10 1/1:99:45:0:0:45:1658:-10,-10,0 0/1:99:10:7:266:3:114:-9.70888,0,-10 1/1:71.749:24:0:0:24:907:-10,-7.22472,0 1/1:17.5636:6:0:0:6:228:-10,-1.80618,0 0/1:99:15:7:263:8:282:-10,0,-10 1/1:38.6357:13:0:0:13:487:-10,-3.91339,0 1/1:59.7078:20:0:0:20:744:-10,-6.0206,0 0/0:40.8225:14:14:524:0:0:0,-4.21442,-10 1/1:38.6357:13:0:0:13:490:-10,-3.91339,0 0/0:31.7916:11:11:379:0:0:0,-3.31133,-10 1/1:71.749:24:0:0:24:879:-10,-7.22472,0 0/1:0.164843:2:2:76:0:0:0,-0.60206,-7.22 0/0:13.7298:5:5:165:0:0:0,-1.50515,-10 1/1:50.6769:17:0:0:17:615:-10,-5.11751,0 1/1:8.53274:3:0:0:3:114:-10,-0.90309,0 0/0:43.8328:15:15:565:0:0:0,-4.51545,-10 1/1:20.5739:7:0:0:7:244:-10,-2.10721,0 1/1:44.6563:15:0:0:15:516:-10,-4.51545,0 1/1:59.7078:20:0:0:20:743:-10,-6.0206,0 1/1:59.7078:20:0:0:20:747:-10,-6.0206,0 0/0:34.8019:12:12:418:0:0:0,-3.61236,-10 0/0:79.9564:27:27:1008:0:0:0,-8.12781,-10 0/1:17.8929:16:1:38:15:542:-10,0,-0.18764 1/1:38.6357:13:0:0:13:475:-10,-3.91339,0 0/0:95.005:32:32:1152:0:0:0,-9.63296,-10 1/1:53.6872:18:0:0:18:677:-10,-5.41854,0 0/1:99:11:7:262:4:152:-10,0,-10 0/1:99:43:25:915:18:643:-10,0,-10 1/1:56.6975:19:0:0:19:703:-10,-5.71957,0 1/1:26.5945:9:0:0:9:340:-10,-2.70927,0 1/1:99:39:0:0:39:1359:-10,-10,0 0/0:34.8019:12:12:421:0:0:0,-3.61236,-10 1/1:99:39:0:0:39:1419:-10,-10,0 0/0:46.8431:16:16:592:0:0:0,-4.81648,-10 0/0:13.7298:5:5:188:0:0:0,-1.50515,-10 0/1:99:48:26:953:21:785:-10,0,-10 1/1:38.6357:13:0:0:13:486:-10,-3.91339,0 1/1:56.6975:19:0:0:19:611:-10,-5.71957,0 1/1:20.5739:7:0:0:7:218:-10,-2.10721,0 1/1:50.6769:17:0:0:17:640:-10,-5.11751,0 1/1:32.6151:11:0:0:11:414:-10,-3.31133,0 0/1:99:27:9:323:18:683:-10,0,-10 1/1:53.6872:18:0:0:18:639:-10,-5.41854,0 1/1:99:37:0:0:37:1355:-10,-10,0 0/1:99:11:4:147:7:258:-10,0,-10 1/1:44.6563:15:0:0:15:567:-10,-4.51545,0 1/1:65.7284:22:0:0:22:780:-10,-6.62266,0 1/1:29.6048:10:0:0:10:376:-10,-3.0103,0 1/1:44.6563:15:0:0:15:523:-10,-4.51545,0 1/1:99:35:0:0:34:1250:-10,-10,0 1/1:32.6151:11:0:0:11:394:-10,-3.31133,0 0/0:46.8431:16:16:582:0:0:0,-4.81648,-10 0/0:88.9865:30:30:1074:0:0:0,-9.0309,-10 0/0:52.8637:18:18:649:0:0:0,-5.41854,-10 0/0:46.8431:16:16:553:0:0:0,-4.81648,-10 0/0:85.9766:29:29:1084:0:0:0,-8.72987,-10 1/1:35.6254:12:0:0:12:433:-10,-3.61236,0 1/1:11.543:4:0:0:4:152:-10,-1.20412,0 0/0:34.8019:12:12:406:0:0:0,-3.61236,-10 1/1:17.5636:6:0:0:6:219:-10,-1.80618,0 1/1:38.6357:13:0:0:13:474:-10,-3.91339,0 0/1:99:36:27:936:9:339:-10,0,-10 1/1:65.7284:22:0:0:22:753:-10,-6.62266,0 1/1:59.7078:20:0:0:20:732:-10,-6.0206,0 1/1:47.6666:16:0:0:16:595:-10,-4.81648,0 1/1:62.7181:21:0:0:21:754:-10,-6.32163,0 1/1:14.5533:5:0:0:5:189:-10,-1.50515,0 1/1:44.6563:15:0:0:15:518:-10,-4.51545,0 1/1:35.6254:12:0:0:12:451:-10,-3.61236,0 1/1:8.53274:3:0:0:3:113:-10,-0.90309,0 1/1:35.6254:12:0:0:12:433:-10,-3.61236,0 1/1:20.5739:7:0:0:7:259:-10,-2.10721,0 1/1:47.6666:16:0:0:16:573:-10,-4.81648,0 scaffold_93 1030487 . C T 1329.39 . AB=0.56044;ABP=5.89764;AC=5;AF=0.0274725;AN=182;AO=53;CIGAR=1X;DP=1486;DPB=1486;DPRA=1.29754;EPP=118.098;EPPR=3106.05;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9142;NS=91;NUMALT=1;ODDS=5.21155;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1894;QR=52384;RO=1433;RPP=4.03458;RPPR=8.64885;RUN=1;SAF=29;SAP=4.03458;SAR=24;SRF=687;SRP=8.28517;SRR=746;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.8247:14:14:517:0:0:0,-4.21442,-10 0/0:67.8659:18:18:634:0:0:0,-5.41854,-10 0/0:70.8762:19:19:653:0:0:0,-5.71957,-10 0/0:40.7732:9:9:340:0:0:0,-2.70927,-10 0/0:40.7732:9:9:338:0:0:0,-2.70927,-10 0/0:37.7629:8:8:291:0:0:0,-2.40824,-10 0/1:99:30:11:412:19:706:-10,0,-10 0/0:91.9473:26:26:960:0:0:0,-7.82678,-10 0/0:28.732:5:5:167:0:0:0,-1.50515,-10 0/0:28.732:5:5:188:0:0:0,-1.50515,-10 0/0:37.7629:8:8:300:0:0:0,-2.40824,-10 0/0:22.7114:3:3:114:0:0:0,-0.90309,-10 0/0:88.9375:25:25:910:0:0:0,-7.52575,-10 0/0:99:36:36:1345:0:0:0,-10,-10 0/0:67.8659:18:18:657:0:0:0,-5.41854,-10 0/0:76.8968:21:21:766:0:0:0,-6.32163,-10 0/0:73.8865:20:20:744:0:0:0,-6.0206,-10 0/0:55.8247:14:14:525:0:0:0,-4.21442,-10 0/0:49.8041:12:12:455:0:0:0,-3.61236,-10 0/0:74.2712:29:28:971:1:16:0,-5.66747,-10 0/0:67.8659:18:18:680:0:0:0,-5.41854,-10 0/0:82.9173:23:23:863:0:0:0,-6.92369,-10 0/0:25.7217:4:4:150:0:0:0,-1.20412,-10 0/0:61.8453:16:16:552:0:0:0,-4.81648,-10 0/0:79.9071:22:22:833:0:0:0,-6.62266,-10 0/0:46.7938:11:11:414:0:0:0,-3.31133,-10 0/0:67.8659:18:18:658:0:0:0,-5.41854,-10 0/0:40.7732:9:9:318:0:0:0,-2.70927,-10 0/0:64.8556:17:17:644:0:0:0,-5.11751,-10 0/0:82.9173:23:23:849:0:0:0,-6.92369,-10 0/0:28.732:5:5:189:0:0:0,-1.50515,-10 0/0:43.7835:10:10:356:0:0:0,-3.0103,-10 0/0:73.8865:20:20:687:0:0:0,-6.0206,-10 0/0:43.7835:10:10:354:0:0:0,-3.0103,-10 0/0:52.8144:13:13:483:0:0:0,-3.91339,-10 0/0:40.7732:9:9:342:0:0:0,-2.70927,-10 0/0:40.7732:9:9:323:0:0:0,-2.70927,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:52.8144:13:13:489:0:0:0,-3.91339,-10 0/0:46.7938:11:11:415:0:0:0,-3.31133,-10 0/0:62.8746:25:24:911:1:16:0,-4.52781,-10 0/0:61.8453:16:16:598:0:0:0,-4.81648,-10 0/0:49.8041:12:12:452:0:0:0,-3.61236,-10 0/0:99:29:29:1045:0:0:0,-8.72987,-10 0/0:64.8556:17:17:631:0:0:0,-5.11751,-10 0/0:52.8144:13:13:479:0:0:0,-3.91339,-10 0/0:99:37:37:1375:0:0:0,-10,-10 0/0:61.8453:16:16:599:0:0:0,-4.81648,-10 0/0:43.7835:10:10:376:0:0:0,-3.0103,-10 0/0:99:37:37:1300:0:0:0,-10,-10 0/0:43.7835:10:10:356:0:0:0,-3.0103,-10 0/0:97.9646:28:28:1009:0:0:0,-8.42884,-10 0/0:46.7938:11:11:396:0:0:0,-3.31133,-10 .:.:.:.:.:.:.:. 0/0:91.9473:26:26:947:0:0:0,-7.82678,-10 0/0:34.7526:7:7:254:0:0:0,-2.10721,-10 0/0:55.8247:14:14:497:0:0:0,-4.21442,-10 0/0:34.7526:7:7:240:0:0:0,-2.10721,-10 0/0:85.9275:24:24:835:0:0:0,-7.22472,-10 0/0:40.7732:9:9:334:0:0:0,-2.70927,-10 0/0:94.9565:27:27:995:0:0:0,-8.12781,-10 0/0:70.8762:19:19:694:0:0:0,-5.71957,-10 0/1:99:29:14:508:15:557:-10,0,-10 0/0:64.8556:17:17:638:0:0:0,-5.11751,-10 0/0:70.8762:19:19:722:0:0:0,-5.71957,-10 0/0:94.9565:27:27:927:0:0:0,-8.12781,-10 0/1:99:11:6:215:5:190:-10,0,-10 0/0:55.8247:14:14:519:0:0:0,-4.21442,-10 0/0:99:30:30:1067:0:0:0,-9.0309,-10 0/0:61.8453:16:16:603:0:0:0,-4.81648,-10 0/0:61.8453:16:16:563:0:0:0,-4.81648,-10 0/0:73.8865:20:20:736:0:0:0,-6.0206,-10 0/0:52.8144:13:13:492:0:0:0,-3.91339,-10 0/0:61.8453:16:16:574:0:0:0,-4.81648,-10 0/0:64.8556:17:17:608:0:0:0,-5.11751,-10 0/0:25.7217:4:4:130:0:0:0,-1.20412,-10 0/0:70.8762:19:19:704:0:0:0,-5.71957,-10 0/0:43.7835:10:10:357:0:0:0,-3.0103,-10 0/0:31.7423:6:6:228:0:0:0,-1.80618,-10 0/0:58.835:15:15:568:0:0:0,-4.51545,-10 0/0:70.8762:19:19:716:0:0:0,-5.71957,-10 0/0:79.9071:22:22:829:0:0:0,-6.62266,-10 0/0:61.8453:16:16:597:0:0:0,-4.81648,-10 0/0:67.8659:18:18:674:0:0:0,-5.41854,-10 0/0:58.835:15:15:548:0:0:0,-4.51545,-10 0/0:34.7526:7:7:247:0:0:0,-2.10721,-10 0/0:64.8556:17:17:616:0:0:0,-5.11751,-10 0/0:37.7629:8:8:300:0:0:0,-2.40824,-10 0/1:43.4096:5:3:94:2:67:-5.85985,0,-8.26818 0/0:55.8247:14:14:475:0:0:0,-4.21442,-10 0/1:99:16:6:222:10:342:-10,0,-10 0/0:55.8247:14:14:518:0:0:0,-4.21442,-10 scaffold_93 1163128 . T C 732.582 . AB=0.54902;ABP=4.07475;AC=2;AF=0.0108696;AN=184;AO=29;CIGAR=1X;DP=1638;DPB=1638;DPRA=1.24555;EPP=6.67934;EPPR=3.14534;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.8271;NS=92;NUMALT=1;ODDS=4.02632;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1080;QR=58634;RO=1608;RPP=65.983;RPPR=3486.06;RUN=1;SAF=11;SAP=6.67934;SAR=18;SRF=810;SRP=3.20476;SRR=798;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.1257:14:14:516:0:0:0,-4.21442,-10 0/0:33.0536:7:7:240:0:0:0,-2.10721,-10 0/0:54.1257:14:14:507:0:0:0,-4.21442,-10 0/0:51.1154:13:13:454:0:0:0,-3.91339,-10 0/0:36.0639:8:8:302:0:0:0,-2.40824,-10 0/0:30.0433:6:6:223:0:0:0,-1.80618,-10 0/0:87.2387:25:25:908:0:0:0,-7.52575,-10 0/0:96.2669:28:28:1034:0:0:0,-8.42884,-10 0/0:48.1051:12:12:431:0:0:0,-3.61236,-10 0/0:33.0536:7:7:261:0:0:0,-2.10721,-10 0/0:27.033:5:5:188:0:0:0,-1.50515,-10 0/0:30.0433:6:6:226:0:0:0,-1.80618,-10 0/0:99:34:34:1241:0:0:0,-10,-10 0/0:99:36:36:1354:0:0:0,-10,-10 0/0:99:38:38:1346:0:0:0,-10,-10 0/0:78.2081:22:22:827:0:0:0,-6.62266,-10 0/0:75.1978:21:21:745:0:0:0,-6.32163,-10 0/0:39.0742:9:9:340:0:0:0,-2.70927,-10 0/0:69.1772:19:19:711:0:0:0,-5.71957,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:72.1875:20:20:712:0:0:0,-6.0206,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:45.0948:11:11:391:0:0:0,-3.31133,-10 0/0:75.1978:21:21:777:0:0:0,-6.32163,-10 0/0:81.2183:23:23:859:0:0:0,-6.92369,-10 0/0:63.1566:17:17:607:0:0:0,-5.11751,-10 0/0:54.1257:14:14:465:0:0:0,-4.21442,-10 0/0:45.0948:11:11:413:0:0:0,-3.31133,-10 0/0:54.1257:14:14:486:0:0:0,-4.21442,-10 0/0:99:35:35:1214:0:0:0,-10,-10 0/0:24.0227:4:4:152:0:0:0,-1.20412,-10 0/0:27.033:5:5:190:0:0:0,-1.50515,-10 0/0:81.2183:23:23:826:0:0:0,-6.92369,-10 0/0:36.0639:8:8:299:0:0:0,-2.40824,-10 0/0:63.1566:17:17:604:0:0:0,-5.11751,-10 0/0:39.0742:9:9:329:0:0:0,-2.70927,-10 0/0:60.1463:16:16:603:0:0:0,-4.81648,-10 0/0:69.1772:19:19:712:0:0:0,-5.71957,-10 0/0:39.0742:9:9:337:0:0:0,-2.70927,-10 0/1:99:17:6:223:11:408:-10,0,-10 0/0:99:32:32:1125:0:0:0,-9.63296,-10 0/0:78.2081:22:22:776:0:0:0,-6.62266,-10 0/0:45.0948:11:11:418:0:0:0,-3.31133,-10 0/1:99:34:16:564:17:639:-10,0,-10 0/0:66.1669:18:18:654:0:0:0,-5.41854,-10 0/0:54.1257:14:14:526:0:0:0,-4.21442,-10 0/0:90.2486:26:26:981:0:0:0,-7.82678,-10 0/0:99:29:29:1023:0:0:0,-8.72987,-10 0/0:51.1154:13:13:480:0:0:0,-3.91339,-10 0/0:87.2387:25:25:920:0:0:0,-7.52575,-10 0/0:33.0536:7:7:258:0:0:0,-2.10721,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:33.0536:7:7:265:0:0:0,-2.10721,-10 0/0:36.0639:8:8:301:0:0:0,-2.40824,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:48.1051:12:12:426:0:0:0,-3.61236,-10 0/0:57.136:15:15:561:0:0:0,-4.51545,-10 0/0:60.1463:16:16:581:0:0:0,-4.81648,-10 0/0:51.1154:13:13:481:0:0:0,-3.91339,-10 0/0:69.1772:19:19:678:0:0:0,-5.71957,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:42.0845:10:10:349:0:0:0,-3.0103,-10 0/0:99:30:30:1065:0:0:0,-9.0309,-10 0/0:54.1257:14:14:497:0:0:0,-4.21442,-10 0/0:45.0948:11:11:408:0:0:0,-3.31133,-10 0/0:90.2486:26:26:950:0:0:0,-7.82678,-10 0/0:72.1875:20:20:737:0:0:0,-6.0206,-10 0/0:54.1257:14:14:479:0:0:0,-4.21442,-10 0/0:93.2581:27:27:981:0:0:0,-8.12781,-10 0/0:42.0845:10:10:370:0:0:0,-3.0103,-10 0/0:39.0742:9:9:342:0:0:0,-2.70927,-10 0/0:87.2387:25:25:897:0:0:0,-7.52575,-10 0/0:54.1257:14:14:526:0:0:0,-4.21442,-10 0/0:63.1566:17:17:644:0:0:0,-5.11751,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:66.1669:18:18:653:0:0:0,-5.41854,-10 0/0:57.136:15:15:566:0:0:0,-4.51545,-10 0/0:63.1566:17:17:624:0:0:0,-5.11751,-10 0/0:39.0742:9:9:336:0:0:0,-2.70927,-10 0/0:39.0742:9:9:339:0:0:0,-2.70927,-10 0/0:99:43:43:1573:0:0:0,-10,-10 0/0:81.2183:23:23:845:0:0:0,-6.92369,-10 0/0:63.1566:17:17:634:0:0:0,-5.11751,-10 0/0:66.1669:18:18:661:0:0:0,-5.41854,-10 0/0:63.1566:17:17:596:0:0:0,-5.11751,-10 0/0:36.0639:8:8:263:0:0:0,-2.40824,-10 0/0:60.1463:16:16:588:0:0:0,-4.81648,-10 0/0:60.1463:16:16:592:0:0:0,-4.81648,-10 0/0:17.624:15:14:528:1:33:0,-0.0393587,-10 0/0:57.136:15:15:558:0:0:0,-4.51545,-10 0/0:51.1154:13:13:488:0:0:0,-3.91339,-10 0/0:63.1566:17:17:630:0:0:0,-5.11751,-10 scaffold_93 1538040 . A G 12650.8 . AB=0.478155;ABP=4.71796;AC=31;AF=0.168478;AN=184;AO=455;CIGAR=1X;DP=2331;DPB=2331;DPRA=1.28675;EPP=4.0841;EPPR=3.34535;GTI=0;LEN=1;MEANALT=1;MQM=59.8044;MQMR=59.9792;NS=92;NUMALT=1;ODDS=0.300322;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=16478;QR=69305;RO=1873;RPP=991.03;RPPR=4070.18;RUN=1;SAF=220;SAP=4.0841;SAR=235;SRF=928;SRP=3.34535;SRR=945;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.305:16:16:607:0:0:0,-4.81648,-10 0/0:15.202:6:6:225:0:0:0,-1.80618,-10 0/1:99:34:11:401:23:867:-10,0,-10 0/0:42.2947:15:15:559:0:0:0,-4.51545,-10 0/0:57.3462:20:20:736:0:0:0,-6.0206,-10 0/0:18.2123:7:7:266:0:0:0,-2.10721,-10 0/1:99:46:28:1028:18:672:-10,0,-10 0/1:99:30:17:645:13:494:-10,0,-10 0/0:33.2638:12:12:433:0:0:0,-3.61236,-10 0/0:18.2123:7:7:266:0:0:0,-2.10721,-10 0/0:33.2638:12:12:435:0:0:0,-3.61236,-10 0/0:18.2123:7:7:264:0:0:0,-2.10721,-10 0/1:99:36:18:661:18:632:-10,0,-10 0/0:99:49:49:1774:0:0:0,-10,-10 0/0:78.4183:27:27:1021:0:0:0,-8.12781,-10 0/1:99:26:13:458:13:488:-10,0,-10 0/0:99:34:34:1282:0:0:0,-10,-10 1/1:26.6371:13:0:0:13:486:-10,-3.91339,0 0/0:20.9855:16:15:567:1:16:0,-2.01236,-10 0/1:99:55:30:1088:25:868:-10,0,-10 0/0:51.3256:18:18:682:0:0:0,-5.41854,-10 0/0:99:41:41:1542:0:0:0,-10,-10 0/0:36.2741:13:13:493:0:0:0,-3.91339,-10 0/0:66.3771:23:23:872:0:0:0,-6.92369,-10 0/0:90.4592:31:31:1147:0:0:0,-9.33193,-10 0/0:99:44:44:1609:0:0:0,-10,-10 0/0:93.4692:32:32:1191:0:0:0,-9.63296,-10 1/1:56.7401:23:0:0:23:871:-10,-6.92369,0 0/0:81.4284:28:28:1024:0:0:0,-8.42884,-10 0/0:99:41:41:1556:0:0:0,-10,-10 0/0:21.2226:8:8:294:0:0:0,-2.40824,-10 0/0:36.2741:13:13:472:0:0:0,-3.91339,-10 0/0:57.3462:20:20:737:0:0:0,-6.0206,-10 1/1:23.6268:12:0:0:12:439:-10,-3.61236,0 1/1:77.8122:30:0:0:30:1054:-10,-9.0309,0 0/0:18.2123:7:7:263:0:0:0,-2.10721,-10 0/0:27.2432:10:10:379:0:0:0,-3.0103,-10 1/1:86.8425:33:0:0:33:1188:-10,-9.93399,0 0/0:72.3977:25:25:914:0:0:0,-7.52575,-10 1/1:53.7298:22:0:0:22:780:-10,-6.62266,0 0/0:96.4745:34:33:1187:0:0:0,-9.93399,-10 1/1:71.7916:28:0:0:28:1045:-10,-8.42884,0 0/0:60.3565:21:21:752:0:0:0,-6.32163,-10 1/1:89.8522:34:0:0:34:1254:-10,-10,0 0/0:99:39:39:1432:0:0:0,-10,-10 0/0:42.2947:15:15:570:0:0:0,-4.51545,-10 0/0:99:58:58:2143:0:0:0,-10,-10 0/0:84.4385:29:29:1088:0:0:0,-8.72987,-10 0/0:45.305:16:16:606:0:0:0,-4.81648,-10 0/0:99:49:49:1799:0:0:0,-10,-10 0/0:24.2329:9:9:339:0:0:0,-2.70927,-10 0/1:99:54:29:1044:25:876:-10,0,-10 0/0:48.3153:17:17:617:0:0:0,-5.11751,-10 0/0:21.2226:8:8:282:0:0:0,-2.40824,-10 0/0:99:73:73:2712:0:0:0,-10,-10 0/0:33.2638:12:12:428:0:0:0,-3.61236,-10 0/0:8.22008:34:32:1194:2:75:0,-0.361057,-10 0/0:36.2741:13:13:462:0:0:0,-3.91339,-10 1/1:71.7916:28:0:0:28:1000:-10,-8.42884,0 0/0:11.1937:12:11:416:1:15:0,-1.03318,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:66.3771:23:23:847:0:0:0,-6.92369,-10 0/1:99:52:29:1052:23:858:-10,0,-10 0/0:63.3668:22:22:786:0:0:0,-6.62266,-10 0/0:51.3256:18:18:660:0:0:0,-5.41854,-10 0/0:99:41:40:1488:0:0:0,-10,-10 1/1:80.8224:31:0:0:31:1114:-10,-9.33193,0 0/0:42.2947:15:15:566:0:0:0,-4.51545,-10 0/0:99:43:43:1574:0:0:0,-10,-10 0/0:57.3462:20:20:693:0:0:0,-6.0206,-10 0/0:51.3256:18:18:684:0:0:0,-5.41854,-10 0/0:99:38:38:1401:0:0:0,-10,-10 0/0:96.4745:33:33:1243:0:0:0,-9.93399,-10 0/0:39.2844:14:14:512:0:0:0,-4.21442,-10 0/0:99:43:43:1601:0:0:0,-10,-10 0/0:69.3874:24:24:900:0:0:0,-7.22472,-10 0/0:54.3359:19:19:707:0:0:0,-5.71957,-10 0/0:51.3256:18:18:661:0:0:0,-5.41854,-10 0/0:18.2123:7:7:263:0:0:0,-2.10721,-10 0/0:27.2432:10:10:378:0:0:0,-3.0103,-10 0/0:99:41:41:1530:0:0:0,-10,-10 0/0:99:39:39:1439:0:0:0,-10,-10 0/1:99:39:19:712:20:701:-10,0,-10 0/1:99:29:14:528:15:534:-10,0,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:12.1917:5:5:188:0:0:0,-1.50515,-10 0/0:66.3771:23:23:871:0:0:0,-6.92369,-10 0/0:48.3153:17:17:631:0:0:0,-5.11751,-10 0/0:6.17107:3:3:111:0:0:0,-0.90309,-10 0/0:39.2844:15:14:530:0:0:0,-4.21442,-10 0/1:99:11:7:266:4:151:-10,0,-10 0/0:78.4183:27:27:1014:0:0:0,-8.12781,-10 scaffold_93 1540238 . C G 2120.76 . AB=0.528302;ABP=3.37904;AC=8;AF=0.0434783;AN=184;AO=86;CIGAR=1X;DP=1598;DPB=1598;DPRA=1.29886;EPP=3.0103;EPPR=5.54368;GTI=1;LEN=1;MEANALT=1;MQM=59.9186;MQMR=59.9398;NS=92;NUMALT=1;ODDS=0.09898;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3024;QR=55903;RO=1512;RPP=181.172;RPPR=3131.79;RUN=1;SAF=44;SAP=3.1113;SAR=42;SRF=753;SRP=3.062;SRR=759;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.2859:20:20:730:0:0:0,-6.0206,-10 0/0:19.1417:6:6:228:0:0:0,-1.80618,-10 0/0:64.2962:21:21:765:0:0:0,-6.32163,-10 0/0:28.1726:9:9:342:0:0:0,-2.70927,-10 0/0:52.255:17:17:626:0:0:0,-5.11751,-10 0/0:34.1932:11:11:405:0:0:0,-3.31133,-10 0/0:97.4095:32:32:1210:0:0:0,-9.63296,-10 0/0:91.3876:30:30:1140:0:0:0,-9.0309,-10 0/0:34.1932:11:11:410:0:0:0,-3.31133,-10 0/0:7.10053:2:2:75:0:0:0,-0.60206,-7.125 0/0:31.1829:10:10:378:0:0:0,-3.0103,-10 0/0:19.1417:6:6:224:0:0:0,-1.80618,-10 0/0:61.2859:20:20:729:0:0:0,-6.0206,-10 0/0:70.3168:23:23:831:0:0:0,-6.92369,-10 0/0:88.3779:29:29:1071:0:0:0,-8.72987,-10 0/0:61.2859:20:20:732:0:0:0,-6.0206,-10 0/0:58.2756:19:19:709:0:0:0,-5.71957,-10 0/0:10.1108:3:3:112:0:0:0,-0.90309,-10 0/0:25.1623:8:8:280:0:0:0,-2.40824,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:46.2344:15:15:548:0:0:0,-4.51545,-10 0/0:82.358:27:27:1000:0:0:0,-8.12781,-10 0/0:22.152:7:7:239:0:0:0,-2.10721,-10 0/0:67.3065:22:22:829:0:0:0,-6.62266,-10 0/0:40.2138:13:13:470:0:0:0,-3.91339,-10 0/0:55.2653:18:18:654:0:0:0,-5.41854,-10 0/0:67.3065:22:22:834:0:0:0,-6.62266,-10 0/0:40.2138:13:13:485:0:0:0,-3.91339,-10 0/0:52.255:17:17:646:0:0:0,-5.11751,-10 0/0:99:37:37:1380:0:0:0,-10,-10 0/0:25.1623:8:8:301:0:0:0,-2.40824,-10 0/0:22.152:7:7:266:0:0:0,-2.10721,-10 0/0:52.255:17:17:621:0:0:0,-5.11751,-10 0/0:28.1726:9:9:305:0:0:0,-2.70927,-10 0/0:34.1932:11:11:417:0:0:0,-3.31133,-10 0/0:13.1211:4:4:147:0:0:0,-1.20412,-10 0/0:25.1623:8:8:282:0:0:0,-2.40824,-10 0/0:99:37:37:1390:0:0:0,-10,-10 0/0:61.2859:20:20:750:0:0:0,-6.0206,-10 0/0:40.2138:13:13:454:0:0:0,-3.91339,-10 0/0:64.2962:21:21:773:0:0:0,-6.32163,-10 0/0:55.2653:18:18:680:0:0:0,-5.41854,-10 0/0:25.1623:8:8:301:0:0:0,-2.40824,-10 0/0:99:33:33:1195:0:0:0,-9.93399,-10 0/0:61.2859:20:20:735:0:0:0,-6.0206,-10 0/0:28.1726:9:9:340:0:0:0,-2.70927,-10 0/0:94.3965:31:31:1129:0:0:0,-9.33193,-10 0/0:52.255:17:17:646:0:0:0,-5.11751,-10 0/0:25.1623:8:8:297:0:0:0,-2.40824,-10 0/0:99:35:35:1317:0:0:0,-10,-10 0/0:46.2344:15:15:567:0:0:0,-4.51545,-10 0/0:91.3876:30:30:1070:0:0:0,-9.0309,-10 0/0:25.1623:8:8:303:0:0:0,-2.40824,-10 0/0:28.1726:9:9:340:0:0:0,-2.70927,-10 0/0:99:40:40:1485:0:0:0,-10,-10 0/0:43.2241:14:14:529:0:0:0,-4.21442,-10 0/0:85.3683:28:28:1017:0:0:0,-8.42884,-10 0/0:28.1726:9:9:342:0:0:0,-2.70927,-10 0/0:25.1623:8:8:299:0:0:0,-2.40824,-10 0/0:40.2138:13:13:471:0:0:0,-3.91339,-10 0/0:61.2859:20:20:752:0:0:0,-6.0206,-10 0/0:46.2344:15:15:533:0:0:0,-4.51545,-10 0/0:99:36:36:1332:0:0:0,-10,-10 0/0:40.2138:13:13:487:0:0:0,-3.91339,-10 0/0:52.255:17:17:640:0:0:0,-5.11751,-10 0/0:55.2653:18:18:646:0:0:0,-5.41854,-10 0/0:55.2653:18:18:684:0:0:0,-5.41854,-10 0/0:34.1932:11:11:409:0:0:0,-3.31133,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:34.1932:11:11:395:0:0:0,-3.31133,-10 1/1:7.13304:15:0:0:15:533:-10,-4.51545,0 0/1:99:42:25:926:17:597:-10,0,-10 1/1:37.236:25:0:0:25:865:-10,-7.52575,0 1/1:16.1639:18:0:0:18:614:-10,-5.41854,0 0/1:0.00889656:11:0:0:11:415:-10,-3.31133,0 0/0:46.2344:15:15:561:0:0:0,-4.51545,-10 0/0:28.1726:9:9:309:0:0:0,-2.70927,-10 0/0:58.2756:19:19:712:0:0:0,-5.71957,-10 0/0:10.1108:3:3:113:0:0:0,-0.90309,-10 0/0:25.1623:8:8:304:0:0:0,-2.40824,-10 0/0:91.3876:30:30:1126:0:0:0,-9.0309,-10 0/0:64.2962:21:21:771:0:0:0,-6.32163,-10 0/0:58.2756:19:19:711:0:0:0,-5.71957,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:76.3374:25:25:946:0:0:0,-7.52575,-10 0/0:25.1623:8:8:300:0:0:0,-2.40824,-10 0/0:52.255:17:17:644:0:0:0,-5.11751,-10 0/0:49.2447:16:16:572:0:0:0,-4.81648,-10 0/0:13.1211:4:4:152:0:0:0,-1.20412,-10 0/0:31.1829:10:10:357:0:0:0,-3.0103,-10 0/0:52.255:17:17:624:0:0:0,-5.11751,-10 0/0:37.2035:12:12:446:0:0:0,-3.61236,-10 scaffold_93 1758630 . G C 61291.1 . AB=0.67382;ABP=125.302;AC=169;AF=0.918478;AN=184;AO=2069;CIGAR=1X;DP=2225;DPB=2225;DPRA=0;EPP=28.8801;EPPR=3.02449;GTI=0;LEN=1;MEANALT=1.03261;MQM=43.3074;MQMR=54.3856;NS=92;NUMALT=1;ODDS=7.84351;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75460;QR=5584;RO=153;RPP=4495.79;RPPR=335.246;RUN=1;SAF=956;SAP=28.8801;SAR=1113;SRF=77;SRP=3.02449;SRR=76;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:73.204:16:0:0:16:554:-10,-4.81648,0 1/1:43.101:6:0:0:6:226:-10,-1.80618,0 1/1:99:27:0:0:27:954:-10,-8.12781,0 1/1:64.1731:13:0:0:13:436:-10,-3.91339,0 1/1:85.245:20:0:0:20:737:-10,-6.0206,0 1/1:55.1422:10:0:0:10:379:-10,-3.0103,0 1/1:99:57:0:0:57:2065:-10,-10,0 1/1:99:28:0:0:28:1027:-10,-8.42884,0 1/1:79.2246:18:0:0:18:676:-10,-5.41854,0 1/1:34.0701:3:0:0:3:114:-10,-0.90309,0 1/1:40.0907:5:0:0:5:181:-10,-1.50515,0 1/1:52.1319:9:0:0:9:307:-10,-2.70927,0 1/1:99:30:0:0:30:1098:-10,-9.0309,0 1/1:99:48:0:0:48:1742:-10,-10,0 1/1:99:32:0:0:32:1155:-10,-9.63296,0 1/1:99:25:0:0:25:913:-10,-7.52575,0 1/1:88.2551:21:0:0:21:735:-10,-6.32163,0 1/1:61.1628:12:0:0:12:396:-10,-3.61236,0 0/1:99:34:11:373:23:771:-10,0,-10 1/1:99:55:0:0:55:1982:-10,-10,0 1/1:99:25:0:0:25:935:-10,-7.52575,0 0/1:99:31:10:357:21:684:-10,0,-10 1/1:64.1731:13:0:0:13:488:-10,-3.91339,0 0/1:99:25:10:373:15:570:-10,0,-10 1/1:99:27:0:0:27:972:-10,-8.12781,0 0/1:99:24:8:286:16:595:-10,0,-10 1/1:82.2349:19:0:0:19:688:-10,-5.71957,0 1/1:79.2246:18:0:0:18:680:-10,-5.41854,0 1/1:99:28:0:0:28:1055:-10,-8.42884,0 1/1:99:36:0:0:36:1276:-10,-10,0 1/1:43.101:6:0:0:6:215:-10,-1.80618,0 1/1:61.1628:12:0:0:12:456:-10,-3.61236,0 1/1:94.2745:23:0:0:23:796:-10,-6.92369,0 1/1:64.1731:13:0:0:13:446:-10,-3.91339,0 1/1:99:28:0:0:28:1056:-10,-8.42884,0 1/1:52.1319:9:0:0:9:342:-10,-2.70927,0 1/1:70.1937:15:0:0:15:543:-10,-4.51545,0 1/1:99:29:0:0:29:1039:-10,-8.72987,0 1/1:85.245:20:0:0:20:716:-10,-6.0206,0 1/1:79.2246:18:0:0:18:674:-10,-5.41854,0 1/1:99:36:0:0:36:1345:-10,-10,0 1/1:76.2142:18:0:0:17:641:-10,-5.11751,0 1/1:99:25:0:0:25:933:-10,-7.52575,0 1/1:99:40:0:0:40:1462:-10,-10,0 1/1:99:33:0:0:33:1183:-10,-9.93399,0 1/1:82.2349:19:0:0:19:702:-10,-5.71957,0 1/1:99:61:0:0:61:2218:-10,-10,0 1/1:99:30:0:0:30:1128:-10,-9.0309,0 1/1:64.1731:13:0:0:13:475:-10,-3.91339,0 1/1:99:65:0:0:65:2385:-10,-10,0 1/1:49.1216:8:0:0:8:300:-10,-2.40824,0 0/1:99:54:14:521:40:1490:-10,0,-10 1/1:55.1422:10:0:0:10:380:-10,-3.0103,0 1/1:70.1937:15:0:0:15:534:-10,-4.51545,0 1/1:99:54:0:0:54:1989:-10,-10,0 1/1:79.2246:18:0:0:18:668:-10,-5.41854,0 0/1:99:29:7:257:22:809:-10,0,-10 1/1:40.0907:5:0:0:5:179:-10,-1.50515,0 1/1:99:31:0:0:30:1098:-10,-9.0309,0 1/1:55.1422:10:0:0:10:380:-10,-3.0103,0 0/1:99:39:10:380:29:1057:-10,0,-10 0/1:99:25:12:456:13:487:-10,0,-10 1/1:99:37:0:0:37:1394:-10,-10,0 1/1:99:32:0:0:32:1192:-10,-9.63296,0 1/1:88.2551:21:0:0:21:734:-10,-6.32163,0 1/1:99:39:0:0:39:1451:-10,-10,0 1/1:70.1937:15:0:0:15:561:-10,-4.51545,0 0/1:70.0221:8:3:114:5:190:-10,0,-9.97995 0/1:99:37:12:418:25:879:-10,0,-10 1/1:76.2142:17:0:0:17:585:-10,-5.11751,0 1/1:97.2832:24:0:0:24:904:-10,-7.22472,0 0/1:99:32:13:460:19:676:-10,0,-10 0/1:99:30:8:298:22:796:-10,0,-10 0/1:99:27:9:342:18:652:-10,0,-10 0/1:99:34:18:655:16:595:-10,0,-10 1/1:76.2142:17:0:0:17:621:-10,-5.11751,0 1/1:61.1628:12:0:0:12:450:-10,-3.61236,0 1/1:85.245:20:0:0:20:750:-10,-6.0206,0 1/1:37.0804:4:0:0:4:129:-10,-1.20412,0 1/1:76.2142:17:0:0:17:641:-10,-5.11751,0 1/1:99:45:0:0:45:1666:-10,-10,0 1/1:53.097:26:1:38:25:924:-10,-2.61181,0 1/1:99:38:0:0:38:1351:-10,-10,0 1/1:94.2745:23:0:0:23:793:-10,-6.92369,0 0/1:99:37:7:256:30:1049:-10,0,-10 1/1:34.0701:3:0:0:3:114:-10,-0.90309,0 1/1:91.265:23:0:0:22:827:-10,-6.62266,0 1/1:73.204:16:0:0:16:583:-10,-4.81648,0 1/1:40.0907:5:0:0:5:185:-10,-1.50515,0 1/1:91.265:22:0:0:22:821:-10,-6.62266,0 1/1:85.245:20:0:0:20:749:-10,-6.0206,0 1/1:79.2246:18:0:0:18:681:-10,-5.41854,0 scaffold_93 1759990 . G A 1455.11 . AB=0.708861;ABP=32.9436;AC=4;AF=0.0217391;AN=184;AO=58;CIGAR=1X;DP=1793;DPB=1793;DPRA=1.05569;EPP=3.16006;EPPR=5.43474;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9723;NS=92;NUMALT=1;ODDS=0.658689;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2097;QR=63509;RO=1734;RPP=128.956;RPPR=3768.34;RUN=1;SAF=30;SAP=3.16006;SAR=28;SRF=845;SRP=5.43474;SRR=889;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.6592:15:15:544:0:0:0,-4.51545,-10 0/0:27.5665:6:6:219:0:0:0,-1.80618,-10 0/0:57.6695:16:16:596:0:0:0,-4.81648,-10 0/0:72.721:21:21:741:0:0:0,-6.32163,-10 0/0:42.618:11:11:379:0:0:0,-3.31133,-10 0/0:39.6077:10:10:370:0:0:0,-3.0103,-10 0/0:99:44:44:1636:0:0:0,-10,-10 0/0:99:32:32:1197:0:0:0,-9.63296,-10 0/0:30.5768:7:7:266:0:0:0,-2.10721,-10 0/0:24.5562:5:5:187:0:0:0,-1.50515,-10 0/0:21.5459:4:4:150:0:0:0,-1.20412,-10 0/0:27.5665:6:6:213:0:0:0,-1.80618,-10 0/0:99:35:35:1227:0:0:0,-10,-10 0/0:90.7823:27:27:969:0:0:0,-8.12781,-10 0/0:72.721:21:21:774:0:0:0,-6.32163,-10 0/0:60.6798:17:17:636:0:0:0,-5.11751,-10 0/0:87.7722:26:26:935:0:0:0,-7.82678,-10 0/0:33.5871:8:8:272:0:0:0,-2.40824,-10 0/0:75.7313:22:22:822:0:0:0,-6.62266,-10 0/0:99:42:42:1555:0:0:0,-10,-10 0/0:90.7823:27:27:974:0:0:0,-8.12781,-10 0/0:90.7823:27:27:1018:0:0:0,-8.12781,-10 0/0:27.5665:6:6:219:0:0:0,-1.80618,-10 0/0:48.6386:13:13:481:0:0:0,-3.91339,-10 0/0:51.6489:14:14:477:0:0:0,-4.21442,-10 0/0:93.792:28:28:976:0:0:0,-8.42884,-10 0/0:84.762:25:25:886:0:0:0,-7.52575,-10 0/0:42.618:11:11:418:0:0:0,-3.31133,-10 0/0:99:31:31:1173:0:0:0,-9.33193,-10 0/0:99:41:40:1444:0:0:0,-10,-10 0/0:36.5974:9:9:328:0:0:0,-2.70927,-10 0/0:54.6592:15:15:517:0:0:0,-4.51545,-10 0/0:42.618:11:11:412:0:0:0,-3.31133,-10 0/0:30.5768:7:7:242:0:0:0,-2.10721,-10 0/0:78.7415:23:23:855:0:0:0,-6.92369,-10 0/0:18.5356:3:3:107:0:0:0,-0.90309,-9.98667 0/0:54.6592:15:15:550:0:0:0,-4.51545,-10 0/0:75.1373:31:30:1100:1:16:0,-6.24057,-10 0/0:60.6798:17:17:618:0:0:0,-5.11751,-10 0/0:69.7107:20:20:724:0:0:0,-6.0206,-10 0/0:99:31:31:1119:0:0:0,-9.33193,-10 0/0:51.6489:14:14:492:0:0:0,-4.21442,-10 0/0:51.6489:14:14:502:0:0:0,-4.21442,-10 0/0:99:33:33:1231:0:0:0,-9.93399,-10 0/0:72.721:21:21:792:0:0:0,-6.32163,-10 0/0:81.7518:24:24:859:0:0:0,-7.22472,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/0:42.618:11:11:416:0:0:0,-3.31133,-10 0/0:99:37:37:1383:0:0:0,-10,-10 0/0:24.7261:13:12:448:1:16:0,-1.19945,-10 0/0:75.7313:22:22:802:0:0:0,-6.62266,-10 0/0:75.7313:22:22:792:0:0:0,-6.62266,-10 0/0:33.5871:8:8:304:0:0:0,-2.40824,-10 0/0:99:41:41:1514:0:0:0,-10,-10 0/0:54.6592:15:15:549:0:0:0,-4.51545,-10 0/0:99:31:31:1168:0:0:0,-9.33193,-10 0/0:45.6283:12:12:454:0:0:0,-3.61236,-10 0/0:75.7313:22:22:820:0:0:0,-6.62266,-10 0/0:33.5871:8:8:303:0:0:0,-2.40824,-10 0/0:96.8013:29:29:1083:0:0:0,-8.72987,-10 0/0:69.7107:20:20:753:0:0:0,-6.0206,-10 0/0:99:39:39:1436:0:0:0,-10,-10 0/0:42.618:11:11:408:0:0:0,-3.31133,-10 0/0:51.6489:14:14:508:0:0:0,-4.21442,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:60.6798:17:17:620:0:0:0,-5.11751,-10 0/0:42.618:11:11:412:0:0:0,-3.31133,-10 0/1:99:32:13:493:19:672:-10,0,-10 0/1:0.0216723:9:0:0:9:342:-10,-2.70927,0 0/0:87.7722:26:26:970:0:0:0,-7.82678,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:90.7823:27:27:984:0:0:0,-8.12781,-10 0/0:39.6077:10:10:368:0:0:0,-3.0103,-10 0/0:84.762:25:25:934:0:0:0,-7.52575,-10 0/1:1.66585:15:0:0:15:558:-10,-4.51545,0 0/0:54.6592:15:15:546:0:0:0,-4.51545,-10 0/0:21.5459:4:4:148:0:0:0,-1.20412,-10 0/0:39.6077:10:10:366:0:0:0,-3.0103,-10 0/0:51.6489:14:14:506:0:0:0,-4.21442,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:99:33:33:1181:0:0:0,-9.93399,-10 0/0:78.7415:23:23:842:0:0:0,-6.92369,-10 0/0:87.7722:26:26:911:0:0:0,-7.82678,-10 0/1:99:23:10:375:13:493:-10,0,-10 0/0:27.5665:6:6:202:0:0:0,-1.80618,-10 0/0:45.6283:12:12:454:0:0:0,-3.61236,-10 0/0:30.5768:7:7:266:0:0:0,-2.10721,-10 0/0:18.5356:3:3:114:0:0:0,-0.90309,-10 0/0:54.6592:15:15:570:0:0:0,-4.51545,-10 0/0:60.6798:17:17:610:0:0:0,-5.11751,-10 0/0:48.6386:13:13:460:0:0:0,-3.91339,-10 scaffold_93 1835299 . G A 149.652 . AB=0.466667;ABP=3.15506;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1981;DPB=1981;DPRA=0.598465;EPP=4.09604;EPPR=9.54234;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9462;NS=92;NUMALT=1;ODDS=8.48333;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=72470;RO=1971;RPP=20.3821;RPPR=4196.56;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=937;SRP=13.3763;SRR=1034;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:20:20:696:0:0:0,-6.0206,-10 0/0:0.000898414:11:10:353:1:38:-1.53006,0,-10 0/0:99:21:21:758:0:0:0,-6.32163,-10 0/0:87.6147:12:12:449:0:0:0,-3.61236,-10 0/0:99:22:22:801:0:0:0,-6.62266,-10 0/0:81.5943:10:10:332:0:0:0,-3.0103,-10 0/0:99:39:39:1445:0:0:0,-10,-10 0/0:99:33:33:1173:0:0:0,-9.93399,-10 0/0:90.6247:13:13:482:0:0:0,-3.91339,-10 0/0:72.5634:7:7:264:0:0:0,-2.10721,-10 0/0:66.5428:5:5:189:0:0:0,-1.50515,-10 0/0:69.5531:6:6:228:0:0:0,-1.80618,-10 0/0:99:36:36:1359:0:0:0,-10,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:99:41:41:1527:0:0:0,-10,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:99:28:28:1040:0:0:0,-8.42884,-10 0/0:90.6247:13:13:492:0:0:0,-3.91339,-10 0/0:99:24:24:862:0:0:0,-7.22472,-10 0/0:99:50:49:1817:0:0:0,-10,-10 0/0:99:26:26:981:0:0:0,-7.82678,-10 0/0:99:42:42:1506:0:0:0,-10,-10 0/0:84.6045:11:11:402:0:0:0,-3.31133,-10 0/0:99:17:17:635:0:0:0,-5.11751,-10 0/0:99:22:22:814:0:0:0,-6.62266,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 0/0:99:21:20:746:0:0:0,-6.0206,-10 0/0:87.6147:12:12:427:0:0:0,-3.61236,-10 0/0:99:22:22:791:0:0:0,-6.62266,-10 0/0:99:30:30:1078:0:0:0,-9.0309,-10 0/0:87.6147:12:12:455:0:0:0,-3.61236,-10 0/0:63.5325:4:4:145:0:0:0,-1.20412,-10 0/0:99:29:29:1079:0:0:0,-8.72987,-10 0/0:84.6045:11:11:416:0:0:0,-3.31133,-10 0/0:99:17:17:641:0:0:0,-5.11751,-10 0/0:81.5943:10:10:374:0:0:0,-3.0103,-10 0/0:84.6045:11:11:396:0:0:0,-3.31133,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:78.584:9:9:341:0:0:0,-2.70927,-10 0/0:99:22:22:802:0:0:0,-6.62266,-10 0/0:99:28:28:996:0:0:0,-8.42884,-10 0/0:99:18:18:658:0:0:0,-5.41854,-10 0/0:99:19:19:681:0:0:0,-5.71957,-10 0/0:99:41:41:1522:0:0:0,-10,-10 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:99:17:17:623:0:0:0,-5.11751,-10 0/0:99:35:35:1273:0:0:0,-10,-10 0/0:99:23:23:864:0:0:0,-6.92369,-10 0/0:90.6247:13:13:492:0:0:0,-3.91339,-10 0/0:99:34:34:1245:0:0:0,-10,-10 0/0:99:16:16:603:0:0:0,-4.81648,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:84.6045:11:11:385:0:0:0,-3.31133,-10 0/0:69.5531:6:6:228:0:0:0,-1.80618,-10 0/0:99:39:39:1388:0:0:0,-10,-10 0/0:99:22:22:812:0:0:0,-6.62266,-10 0/0:99:21:21:757:0:0:0,-6.32163,-10 0/0:96.6439:15:15:544:0:0:0,-4.51545,-10 0/0:93.6345:14:14:508:0:0:0,-4.21442,-10 0/0:90.6247:13:13:482:0:0:0,-3.91339,-10 0/0:99:36:36:1341:0:0:0,-10,-10 0/0:99:19:19:673:0:0:0,-5.71957,-10 0/0:99:41:41:1513:0:0:0,-10,-10 0/0:99:23:23:808:0:0:0,-6.92369,-10 0/0:96.6439:15:15:546:0:0:0,-4.51545,-10 0/0:99:42:42:1579:0:0:0,-10,-10 0/0:99:20:20:724:0:0:0,-6.0206,-10 0/0:81.5943:10:10:379:0:0:0,-3.0103,-10 0/0:99:40:40:1497:0:0:0,-10,-10 0/0:99:17:17:640:0:0:0,-5.11751,-10 0/0:96.6439:15:15:543:0:0:0,-4.51545,-10 0/0:99:24:24:888:0:0:0,-7.22472,-10 0/1:99:15:8:293:7:266:-10,0,-10 0/0:90.6247:13:13:493:0:0:0,-3.91339,-10 0/0:99:22:22:830:0:0:0,-6.62266,-10 0/0:93.6345:14:14:507:0:0:0,-4.21442,-10 0/0:90.6247:13:13:469:0:0:0,-3.91339,-10 0/0:99:22:22:823:0:0:0,-6.62266,-10 0/0:75.5737:8:8:300:0:0:0,-2.40824,-10 0/0:99:20:20:756:0:0:0,-6.0206,-10 0/0:99:34:34:1272:0:0:0,-10,-10 0/0:99:33:33:1251:0:0:0,-9.93399,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:99:22:22:811:0:0:0,-6.62266,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:87.6147:12:12:411:0:0:0,-3.61236,-10 0/0:99:20:20:746:0:0:0,-6.0206,-10 0/0:99:17:17:644:0:0:0,-5.11751,-10 0/0:90.6247:13:13:485:0:0:0,-3.91339,-10 0/0:99:21:21:783:0:0:0,-6.32163,-10 0/0:99:31:31:1082:0:0:0,-9.33193,-10 0/0:99:22:22:813:0:0:0,-6.62266,-10 scaffold_93 1835316 . T C 413.853 . AB=0.6;ABP=5.61607;AC=2;AF=0.0108696;AN=184;AO=18;CIGAR=1X;DP=1966;DPB=1966;DPRA=0.697314;EPP=7.35324;EPPR=14.6078;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9456;NS=92;NUMALT=1;ODDS=11.4276;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=674;QR=71655;RO=1948;RPP=42.0968;RPPR=4233.04;RUN=1;SAF=6;SAP=7.35324;SAR=12;SRF=923;SRP=14.6078;SRR=1025;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:97.7915:20:20:704:0:0:0,-6.0206,-10 0/0:67.6915:10:10:373:0:0:0,-3.0103,-10 0/0:99:21:21:792:0:0:0,-6.32163,-10 0/0:73.7121:12:12:454:0:0:0,-3.61236,-10 0/0:99:22:22:828:0:0:0,-6.62266,-10 0/0:67.6915:10:10:350:0:0:0,-3.0103,-10 0/0:99:39:39:1394:0:0:0,-10,-10 0/0:99:33:33:1167:0:0:0,-9.93399,-10 0/0:76.7223:13:13:477:0:0:0,-3.91339,-10 0/0:58.6606:7:7:243:0:0:0,-2.10721,-10 0/0:52.64:5:5:184:0:0:0,-1.50515,-10 0/0:55.6503:6:6:228:0:0:0,-1.80618,-10 0/0:99:36:36:1357:0:0:0,-10,-10 0/0:99:33:33:1207:0:0:0,-9.93399,-10 0/0:99:41:41:1546:0:0:0,-10,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:76.7223:13:13:472:0:0:0,-3.91339,-10 0/0:99:24:24:865:0:0:0,-7.22472,-10 0/0:99:49:49:1811:0:0:0,-10,-10 0/0:99:26:26:980:0:0:0,-7.82678,-10 0/0:99:42:42:1531:0:0:0,-10,-10 0/0:67.6915:10:10:371:0:0:0,-3.0103,-10 0/0:88.7632:17:17:633:0:0:0,-5.11751,-10 0/0:99:22:22:793:0:0:0,-6.62266,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:99:21:21:786:0:0:0,-6.32163,-10 0/0:73.7121:12:12:430:0:0:0,-3.61236,-10 0/0:99:22:22:815:0:0:0,-6.62266,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:73.7121:12:12:450:0:0:0,-3.61236,-10 0/0:49.6297:4:4:128:0:0:0,-1.20412,-10 0/0:99:29:29:999:0:0:0,-8.72987,-10 0/1:1.41145e-05:11:0:0:11:409:-10,-3.31133,0 0/0:88.7632:17:17:629:0:0:0,-5.11751,-10 0/0:67.6915:10:10:366:0:0:0,-3.0103,-10 0/0:70.7018:11:11:418:0:0:0,-3.31133,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:64.6812:9:9:330:0:0:0,-2.70927,-10 0/0:99:22:22:798:0:0:0,-6.62266,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:91.7731:18:18:649:0:0:0,-5.41854,-10 0/0:94.7827:19:19:708:0:0:0,-5.71957,-10 0/0:99:41:41:1519:0:0:0,-10,-10 0/0:99:24:24:891:0:0:0,-7.22472,-10 0/0:88.7632:17:17:623:0:0:0,-5.11751,-10 0/0:99:34:34:1277:0:0:0,-10,-10 0/0:99:23:23:870:0:0:0,-6.92369,-10 0/0:76.7223:13:13:470:0:0:0,-3.91339,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:85.7531:16:16:605:0:0:0,-4.81648,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:67.6915:10:10:356:0:0:0,-3.0103,-10 0/0:55.6503:6:6:228:0:0:0,-1.80618,-10 0/0:99:39:39:1418:0:0:0,-10,-10 0/0:99:22:22:826:0:0:0,-6.62266,-10 0/0:99:21:21:775:0:0:0,-6.32163,-10 0/0:82.7429:15:15:548:0:0:0,-4.51545,-10 0/0:76.7223:13:13:472:0:0:0,-3.91339,-10 0/0:67.6915:10:10:368:0:0:0,-3.0103,-10 0/0:99:36:36:1327:0:0:0,-10,-10 0/0:94.7827:19:19:712:0:0:0,-5.71957,-10 0/0:99:41:41:1490:0:0:0,-10,-10 0/0:99:22:22:820:0:0:0,-6.62266,-10 0/0:82.7429:15:15:559:0:0:0,-4.51545,-10 0/0:99:42:42:1562:0:0:0,-10,-10 0/1:99:19:12:435:7:265:-10,0,-10 0/0:67.6915:10:10:378:0:0:0,-3.0103,-10 0/0:99:40:40:1453:0:0:0,-10,-10 0/0:88.7632:17:17:639:0:0:0,-5.11751,-10 0/0:82.7429:15:15:521:0:0:0,-4.51545,-10 0/0:99:24:24:867:0:0:0,-7.22472,-10 0/0:82.7429:15:15:545:0:0:0,-4.51545,-10 0/0:76.7223:13:13:489:0:0:0,-3.91339,-10 0/0:99:22:22:816:0:0:0,-6.62266,-10 0/0:79.7326:14:14:512:0:0:0,-4.21442,-10 0/0:76.7223:13:13:463:0:0:0,-3.91339,-10 0/0:99:22:22:797:0:0:0,-6.62266,-10 0/0:61.6709:8:8:283:0:0:0,-2.40824,-10 0/0:97.7915:20:20:757:0:0:0,-6.0206,-10 0/0:99:34:34:1273:0:0:0,-10,-10 0/0:99:33:33:1220:0:0:0,-9.93399,-10 0/0:99:28:28:1016:0:0:0,-8.42884,-10 0/0:99:22:22:799:0:0:0,-6.62266,-10 0/0:99:25:25:949:0:0:0,-7.52575,-10 0/0:73.7121:12:12:449:0:0:0,-3.61236,-10 0/0:97.7915:20:20:734:0:0:0,-6.0206,-10 0/0:88.7632:17:17:638:0:0:0,-5.11751,-10 0/0:76.7223:13:13:494:0:0:0,-3.91339,-10 0/0:99:21:21:770:0:0:0,-6.32163,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:99:22:22:827:0:0:0,-6.62266,-10 scaffold_93 2095302 . G T 12013.3 . AB=0.529412;ABP=5.82044;AC=64;AF=0.347826;AN=184;AO=426;CIGAR=1X;DP=1279;DPB=1279;DPRA=1.03279;EPP=5.94638;EPPR=3.03326;GTI=3;LEN=1;MEANALT=1.02273;MQM=60;MQMR=59.9929;NS=92;NUMALT=1;ODDS=0.814342;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15725;QR=30875;RO=851;RPP=876.676;RPPR=1773.59;RUN=1;SAF=219;SAP=3.74432;SAR=207;SRF=418;SRP=3.58443;SRR=433;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:36.6697:10:10:332:0:0:0,-3.0103,-10 0/0:33.6594:9:9:320:0:0:0,-2.70927,-10 0/0:33.6594:9:9:293:0:0:0,-2.70927,-10 0/0:42.6903:12:12:443:0:0:0,-3.61236,-10 0/0:30.6491:8:8:293:0:0:0,-2.40824,-10 0/0:39.68:11:11:405:0:0:0,-3.31133,-10 0/0:87.8441:27:27:992:0:0:0,-8.12781,-10 0/1:99:17:8:301:9:310:-10,0,-10 0/0:36.6697:10:10:375:0:0:0,-3.0103,-10 0/1:0.100163:2:0:0:2:76:-7.22,-0.60206,0 1/1:9.9751:6:0:0:6:228:-10,-1.80618,0 0/0:27.6388:7:7:243:0:0:0,-2.10721,-10 0/0:69.783:21:21:768:0:0:0,-6.32163,-10 0/1:99:32:17:547:15:548:-10,0,-10 0/1:99:17:6:221:11:415:-10,0,-10 0/0:60.7521:18:18:667:0:0:0,-5.41854,-10 0/0:33.6594:9:9:333:0:0:0,-2.70927,-10 0/0:30.6491:8:8:276:0:0:0,-2.40824,-10 1/1:19.006:9:0:0:9:334:-10,-2.70927,0 0/0:93.8627:29:29:1023:0:0:0,-8.72987,-10 0/1:99:11:4:152:7:256:-10,0,-10 0/1:99:18:10:378:8:275:-10,0,-10 0/0:27.6388:7:7:265:0:0:0,-2.10721,-10 0/1:99:14:9:296:5:185:-10,0,-10 0/0:48.7109:14:14:532:0:0:0,-4.21442,-10 1/1:43.0884:17:0:0:17:635:-10,-5.11751,0 1/1:31.0472:13:0:0:13:471:-10,-3.91339,0 0/0:42.6903:12:12:429:0:0:0,-3.61236,-10 1/1:19.006:9:0:0:9:340:-10,-2.70927,0 0/0:81.824:26:25:917:0:0:0,-7.52575,-10 0/1:0.415307:4:0:0:4:152:-10,-1.20412,0 1/1:19.006:9:0:0:9:340:-10,-2.70927,0 1/1:49.109:19:0:0:19:693:-10,-5.71957,0 1/1:9.9751:6:0:0:6:205:-10,-1.80618,0 0/0:20.8848:21:20:710:1:38:0,-1.19941,-10 0/0:18.6079:4:4:152:0:0:0,-1.20412,-10 0/0:36.6697:10:10:378:0:0:0,-3.0103,-10 0/1:99:14:7:257:7:253:-10,0,-10 0/0:66.7727:20:20:720:0:0:0,-6.0206,-10 0/0:33.6594:9:9:342:0:0:0,-2.70927,-10 0/1:99:18:10:376:8:303:-10,0,-10 0/1:0.230002:19:1:38:18:682:-10,-0.640816,0 1/1:34.0575:14:0:0:14:531:-10,-4.21442,0 0/0:93.8627:29:29:1022:0:0:0,-8.72987,-10 0/1:99:20:10:379:9:342:-10,0,-10 0/1:99:14:9:341:5:168:-10,0,-10 0/1:99:28:17:559:11:413:-10,0,-10 0/0:66.7727:20:20:736:0:0:0,-6.0206,-10 0/0:30.6491:8:8:281:0:0:0,-2.40824,-10 0/0:96.8702:30:30:1096:0:0:0,-9.0309,-10 1/1:15.9957:8:0:0:8:302:-10,-2.40824,0 0/1:99:28:17:636:11:358:-10,0,-10 1/1:9.9751:6:0:0:6:219:-10,-1.80618,0 1/1:15.9957:8:0:0:8:293:-10,-2.40824,0 0/1:99:28:13:469:15:567:-10,0,-10 1/1:25.0266:11:0:0:11:405:-10,-3.31133,0 0/0:60.7521:18:18:669:0:0:0,-5.41854,-10 1/1:9.9751:6:0:0:6:226:-10,-1.80618,0 0/0:36.6697:10:10:373:0:0:0,-3.0103,-10 0/0:18.6079:4:4:152:0:0:0,-1.20412,-10 0/0:72.7933:22:22:819:0:0:0,-6.62266,-10 1/1:37.0678:15:0:0:15:530:-10,-4.51545,0 1/1:40.0781:16:0:0:16:601:-10,-4.81648,0 0/0:39.68:11:11:418:0:0:0,-3.31133,-10 1/1:15.9957:8:0:0:8:303:-10,-2.40824,0 0/0:75.8036:23:23:829:0:0:0,-6.92369,-10 1/1:28.0369:12:0:0:12:455:-10,-3.61236,0 0/0:24.6285:6:6:221:0:0:0,-1.80618,-10 0/1:99:19:6:228:13:494:-10,0,-10 0/0:30.6491:8:8:275:0:0:0,-2.40824,-10 0/0:36.6697:10:10:324:0:0:0,-3.0103,-10 0/0:90.8537:28:28:950:0:0:0,-8.42884,-10 0/0:48.7109:14:14:524:0:0:0,-4.21442,-10 0/0:24.6285:6:6:228:0:0:0,-1.80618,-10 0/0:63.7624:19:19:701:0:0:0,-5.71957,-10 0/0:39.68:11:11:404:0:0:0,-3.31133,-10 1/1:22.0163:10:0:0:10:365:-10,-3.0103,0 0/0:42.6903:12:12:436:0:0:0,-3.61236,-10 0/0:24.6285:6:6:221:0:0:0,-1.80618,-10 0/0:24.6285:6:6:227:0:0:0,-1.80618,-10 0/0:51.7212:15:15:546:0:0:0,-4.51545,-10 0/1:99:15:8:280:7:266:-10,0,-10 0/0:39.68:11:11:409:0:0:0,-3.31133,-10 0/0:60.7521:18:18:684:0:0:0,-5.41854,-10 0/1:99:17:4:129:13:485:-10,0,-10 0/0:21.6182:5:5:190:0:0:0,-1.50515,-10 1/1:40.0781:16:0:0:16:604:-10,-4.81648,0 0/0:57.7418:17:17:638:0:0:0,-5.11751,-10 0/1:99:6:3:112:3:114:-10,0,-9.94818 0/1:99:15:5:189:10:372:-10,0,-10 0/1:99:18:11:406:7:243:-10,0,-10 1/1:19.006:9:0:0:9:330:-10,-2.70927,0 scaffold_93 2291317 . G A 1349.77 . AB=0.528571;ABP=3.50664;AC=6;AF=0.0326087;AN=184;AO=55;CIGAR=1X;DP=1247;DPB=1247;DPRA=1.32114;EPP=3.99733;EPPR=2582.73;GTI=2;LEN=1;MEANALT=1;MQM=53.3455;MQMR=59.9304;NS=92;NUMALT=1;ODDS=0.880242;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2004;QR=43704;RO=1192;RPP=113.913;RPPR=3.89201;RUN=1;SAF=29;SAP=3.36563;SAR=26;SRF=584;SRP=4.0596;SRR=608;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:17.3985:2:2:76:0:0:0,-0.60206,-7.22 0/0:32.45:7:7:266:0:0:0,-2.10721,-10 0/0:71.5839:20:20:750:0:0:0,-6.0206,-10 0/0:35.4603:8:8:304:0:0:0,-2.40824,-10 0/0:35.4603:8:8:303:0:0:0,-2.40824,-10 0/0:29.4397:6:6:226:0:0:0,-1.80618,-10 0/0:65.5633:18:18:662:0:0:0,-5.41854,-10 0/0:65.5633:18:18:653:0:0:0,-5.41854,-10 0/0:53.5221:14:14:493:0:0:0,-4.21442,-10 0/0:17.3985:2:2:76:0:0:0,-0.60206,-7.22 0/0:23.4191:4:4:129:0:0:0,-1.20412,-10 0/0:29.4397:6:6:221:0:0:0,-1.80618,-10 0/0:86.6353:25:25:918:0:0:0,-7.52575,-10 0/0:59.5427:16:16:545:0:0:0,-4.81648,-10 0/0:74.5942:21:21:793:0:0:0,-6.32163,-10 0/0:56.5324:15:15:542:0:0:0,-4.51545,-10 0/0:68.5736:19:19:708:0:0:0,-5.71957,-10 0/0:41.4809:10:10:378:0:0:0,-3.0103,-10 0/0:56.5324:15:15:562:0:0:0,-4.51545,-10 0/0:89.6455:26:26:943:0:0:0,-7.82678,-10 0/0:50.5118:13:13:479:0:0:0,-3.91339,-10 0/0:80.6148:23:23:858:0:0:0,-6.92369,-10 0/0:17.3985:2:2:76:0:0:0,-0.60206,-7.22 0/0:35.4603:8:8:293:0:0:0,-2.40824,-10 0/0:44.4912:11:11:409:0:0:0,-3.31133,-10 0/0:74.5942:21:21:776:0:0:0,-6.32163,-10 0/0:47.5015:12:12:446:0:0:0,-3.61236,-10 0/0:26.4294:5:5:189:0:0:0,-1.50515,-10 0/0:26.4294:5:5:187:0:0:0,-1.50515,-10 0/0:47.5015:12:12:446:0:0:0,-3.61236,-10 0/0:20.4088:3:3:109:0:0:0,-0.90309,-10 0/0:32.45:7:7:243:0:0:0,-2.10721,-10 0/0:71.5839:20:20:747:0:0:0,-6.0206,-10 0/0:26.4294:5:5:190:0:0:0,-1.50515,-10 0/0:50.5118:13:13:460:0:0:0,-3.91339,-10 0/0:26.4294:5:5:190:0:0:0,-1.50515,-10 0/0:29.4397:6:6:211:0:0:0,-1.80618,-10 0/0:68.5736:19:19:693:0:0:0,-5.71957,-10 0/0:53.5221:14:14:526:0:0:0,-4.21442,-10 0/0:29.4397:6:6:205:0:0:0,-1.80618,-10 0/0:80.6148:23:23:789:0:0:0,-6.92369,-10 0/0:62.553:17:17:599:0:0:0,-5.11751,-10 0/0:68.5736:19:19:698:0:0:0,-5.71957,-10 0/0:86.6353:25:25:916:0:0:0,-7.52575,-10 0/0:65.5633:18:18:651:0:0:0,-5.41854,-10 0/0:47.5015:12:12:446:0:0:0,-3.61236,-10 0/0:99:36:36:1357:0:0:0,-10,-10 0/0:68.5736:19:19:715:0:0:0,-5.71957,-10 0/0:32.45:7:7:261:0:0:0,-2.10721,-10 0/0:92.6556:27:27:999:0:0:0,-8.12781,-10 0/0:26.4294:5:5:190:0:0:0,-1.50515,-10 0/0:80.6148:23:23:860:0:0:0,-6.92369,-10 0/0:32.45:7:7:260:0:0:0,-2.10721,-10 0/0:41.4809:10:10:361:0:0:0,-3.0103,-10 0/0:95.6654:28:28:1052:0:0:0,-8.42884,-10 0/0:38.4706:9:9:330:0:0:0,-2.70927,-10 0/0:62.553:17:17:639:0:0:0,-5.11751,-10 0/0:26.4294:5:5:188:0:0:0,-1.50515,-10 0/0:41.4809:10:10:365:0:0:0,-3.0103,-10 0/1:0.0619064:9:0:0:9:339:-10,-2.70927,0 0/0:83.6251:24:24:849:0:0:0,-7.22472,-10 0/0:59.5427:16:16:599:0:0:0,-4.81648,-10 0/0:77.6045:22:22:798:0:0:0,-6.62266,-10 0/0:71.5839:20:20:684:0:0:0,-6.0206,-10 0/0:41.4809:10:10:362:0:0:0,-3.0103,-10 0/0:80.6148:23:23:840:0:0:0,-6.92369,-10 0/0:59.5427:16:16:574:0:0:0,-4.81648,-10 0/0:50.5118:13:13:468:0:0:0,-3.91339,-10 0/0:68.5736:19:19:692:0:0:0,-5.71957,-10 0/0:38.4706:9:9:318:0:0:0,-2.70927,-10 1/1:14.0456:18:0:0:18:641:-10,-5.41854,0 0/0:74.5942:21:21:786:0:0:0,-6.32163,-10 0/1:99:16:5:190:11:418:-10,0,-10 0/0:38.4706:9:9:339:0:0:0,-2.70927,-10 0/1:99:26:10:350:16:568:-10,0,-10 0/0:38.4706:9:9:325:0:0:0,-2.70927,-10 0/0:35.4603:8:8:301:0:0:0,-2.40824,-10 0/0:41.4809:10:10:357:0:0:0,-3.0103,-10 0/0:26.4294:5:5:165:0:0:0,-1.50515,-10 0/0:35.4603:8:8:304:0:0:0,-2.40824,-10 0/0:74.5942:21:21:752:0:0:0,-6.32163,-10 0/0:47.5015:12:12:449:0:0:0,-3.61236,-10 0/0:56.5324:15:15:569:0:0:0,-4.51545,-10 0/0:41.4809:10:10:379:0:0:0,-3.0103,-10 0/1:1.18324:19:18:633:1:38:0,-0.640816,-10 0/0:14.3882:1:1:38:0:0:0,-0.30103,-3.8 0/0:35.4603:8:8:294:0:0:0,-2.40824,-10 0/0:35.4603:8:8:298:0:0:0,-2.40824,-10 0/0:26.4294:5:5:188:0:0:0,-1.50515,-10 0/0:50.5118:13:13:488:0:0:0,-3.91339,-10 0/0:59.5427:16:16:596:0:0:0,-4.81648,-10 0/0:74.5942:21:21:762:0:0:0,-6.32163,-10 scaffold_93 2291326 . G C 1326.43 . AB=0.705882;ABP=21.7871;AC=5;AF=0.0271739;AN=184;AO=54;CIGAR=1X;DP=1242;DPB=1242;DPRA=1.29412;EPP=3.6537;EPPR=2574.04;GTI=1;LEN=1;MEANALT=1;MQM=53.2222;MQMR=59.92;NS=92;NUMALT=1;ODDS=1.29621;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1944;QR=43615;RO=1188;RPP=120.27;RPPR=5.37918;RUN=1;SAF=29;SAP=3.6537;SAR=25;SRF=575;SRP=5.6497;SRR=613;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:11.7672:2:2:76:0:0:0,-0.60206,-7.22 0/0:26.8187:7:7:265:0:0:0,-2.10721,-10 0/0:65.9526:20:20:708:0:0:0,-6.0206,-10 0/0:29.829:8:8:303:0:0:0,-2.40824,-10 0/0:29.829:8:8:304:0:0:0,-2.40824,-10 0/0:23.8084:6:6:215:0:0:0,-1.80618,-10 0/0:59.932:18:18:662:0:0:0,-5.41854,-10 0/0:59.932:18:18:650:0:0:0,-5.41854,-10 0/0:47.8908:14:14:530:0:0:0,-4.21442,-10 0/0:11.7672:2:2:76:0:0:0,-0.60206,-7.22 0/0:17.7878:4:4:145:0:0:0,-1.20412,-10 0/0:23.8084:6:6:223:0:0:0,-1.80618,-10 0/0:81.0041:25:25:900:0:0:0,-7.52575,-10 0/0:53.9114:16:16:550:0:0:0,-4.81648,-10 0/0:68.9629:21:21:792:0:0:0,-6.32163,-10 0/0:50.9011:15:15:538:0:0:0,-4.51545,-10 0/0:62.9423:19:19:691:0:0:0,-5.71957,-10 0/0:35.8496:10:10:357:0:0:0,-3.0103,-10 0/0:50.9011:15:15:542:0:0:0,-4.51545,-10 0/0:81.0041:25:25:891:0:0:0,-7.52575,-10 0/0:44.8805:13:13:490:0:0:0,-3.91339,-10 0/0:74.9834:23:23:861:0:0:0,-6.92369,-10 0/0:11.7672:2:2:67:0:0:0,-0.60206,-6.365 0/0:29.829:8:8:303:0:0:0,-2.40824,-10 0/0:38.8599:11:11:418:0:0:0,-3.31133,-10 0/0:65.9526:20:20:724:0:0:0,-6.0206,-10 0/0:38.8599:11:11:416:0:0:0,-3.31133,-10 0/0:17.7878:4:4:152:0:0:0,-1.20412,-10 0/0:20.7981:5:5:188:0:0:0,-1.50515,-10 0/0:41.8702:12:12:453:0:0:0,-3.61236,-10 0/0:14.7775:3:3:105:0:0:0,-0.90309,-9.8 0/0:26.8187:7:7:263:0:0:0,-2.10721,-10 0/0:65.9526:20:20:756:0:0:0,-6.0206,-10 0/0:20.7981:5:5:188:0:0:0,-1.50515,-10 0/0:44.8805:13:13:491:0:0:0,-3.91339,-10 0/0:20.7981:5:5:190:0:0:0,-1.50515,-10 0/0:23.8084:6:6:183:0:0:0,-1.80618,-10 0/0:62.9423:19:19:697:0:0:0,-5.71957,-10 0/0:50.9011:15:15:565:0:0:0,-4.51545,-10 0/0:26.8187:7:7:252:0:0:0,-2.10721,-10 0/0:74.9834:23:23:820:0:0:0,-6.92369,-10 0/0:56.9217:17:17:595:0:0:0,-5.11751,-10 0/0:62.9423:19:19:713:0:0:0,-5.71957,-10 0/0:81.0041:25:25:922:0:0:0,-7.52575,-10 0/0:59.932:18:18:678:0:0:0,-5.41854,-10 0/0:41.8702:12:12:443:0:0:0,-3.61236,-10 0/0:99:36:36:1337:0:0:0,-10,-10 0/0:62.9423:19:19:696:0:0:0,-5.71957,-10 0/0:26.8187:7:7:266:0:0:0,-2.10721,-10 0/0:84.0142:26:26:934:0:0:0,-7.82678,-10 0/0:20.7981:5:5:189:0:0:0,-1.50515,-10 0/0:77.9937:24:24:883:0:0:0,-7.22472,-10 0/0:26.8187:7:7:266:0:0:0,-2.10721,-10 0/0:35.8496:10:10:356:0:0:0,-3.0103,-10 0/0:93.0452:29:29:1093:0:0:0,-8.72987,-10 0/0:32.8393:9:9:341:0:0:0,-2.70927,-10 0/0:53.9114:16:16:594:0:0:0,-4.81648,-10 0/0:20.7981:5:5:186:0:0:0,-1.50515,-10 0/0:35.8496:10:10:364:0:0:0,-3.0103,-10 0/1:0.0471738:9:0:0:9:335:-10,-2.70927,0 0/0:77.9937:24:24:845:0:0:0,-7.22472,-10 0/0:53.9114:16:16:575:0:0:0,-4.81648,-10 0/0:71.9732:22:22:747:0:0:0,-6.62266,-10 0/0:65.9526:20:20:696:0:0:0,-6.0206,-10 0/0:35.8496:10:10:362:0:0:0,-3.0103,-10 0/0:74.9834:23:23:864:0:0:0,-6.92369,-10 0/0:53.9114:16:16:594:0:0:0,-4.81648,-10 0/0:41.8702:12:12:443:0:0:0,-3.61236,-10 0/0:62.9423:19:19:694:0:0:0,-5.71957,-10 0/0:32.8393:9:9:342:0:0:0,-2.70927,-10 1/1:20.5699:18:0:0:18:628:-10,-5.41854,0 0/0:68.9629:21:21:795:0:0:0,-6.32163,-10 0/1:99:16:5:189:11:416:-10,0,-10 0/0:32.8393:9:9:318:0:0:0,-2.70927,-10 0/1:99:26:10:380:16:565:-10,0,-10 0/0:26.8187:7:7:266:0:0:0,-2.10721,-10 0/0:29.829:8:8:300:0:0:0,-2.40824,-10 0/0:35.8496:10:10:373:0:0:0,-3.0103,-10 0/0:20.7981:5:5:179:0:0:0,-1.50515,-10 0/0:29.829:8:8:304:0:0:0,-2.40824,-10 0/0:68.9629:21:21:770:0:0:0,-6.32163,-10 0/0:41.8702:12:12:446:0:0:0,-3.61236,-10 0/0:50.9011:15:15:569:0:0:0,-4.51545,-10 0/0:35.8496:10:10:380:0:0:0,-3.0103,-10 0/0:62.9423:19:19:683:0:0:0,-5.71957,-10 0/0:8.75686:1:1:38:0:0:0,-0.30103,-3.8 0/0:29.829:8:8:281:0:0:0,-2.40824,-10 0/0:29.829:8:8:300:0:0:0,-2.40824,-10 0/0:20.7981:5:5:186:0:0:0,-1.50515,-10 0/0:44.8805:13:13:494:0:0:0,-3.91339,-10 0/0:53.9114:16:16:599:0:0:0,-4.81648,-10 0/0:68.9629:21:21:747:0:0:0,-6.32163,-10 scaffold_93 2291333 . C G 34721.5 . AB=0.556098;ABP=8.61376;AC=180;AF=0.978261;AN=184;AO=198;CIGAR=1X2M1X;DP=1237;DPB=1238;DPRA=1.1995;EPP=432.962;EPPR=3.6537;GTI=2;LEN=1;MEANALT=1.73684;MQM=59.904;MQMR=53.2222;NS=92;NUMALT=2;ODDS=0.364222;PAIRED=0;PAIREDR=0;PAO=1;PQA=37;PQR=0;PRO=0;QA=7202;QR=1971;RO=54;RPP=3.18577;RPPR=120.27;RUN=1;SAF=97;SAP=3.18577;SAR=101;SRF=29;SRP=3.6537;SRR=25;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1|1:11.4982:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 1|1:26.5497:7:0:0:7,0:262,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:65.6836:20:0:0:20,0:745,0:-10,-6.0206,0,-10,-6.0206,-10 1|1:7.97577:8:0:0:0,8:0,304:-10,-10,-10,-2.40824,-2.40824,0 1|1:99:8:0:0:3,5:113,189:-10,-10,-10,-10,0,-9.88661 1|1:26.5497:7:0:0:7,0:263,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:56.6527:17:0:0:17,0:615,0:-10,-5.11751,0,-10,-5.11751,-10 1|1:56.6527:18:0:0:17,0:620,0:-10,-5.11751,0,-10,-5.11751,-10 1|1:23.0273:13:0:0:0,13:0,485:-10,-10,-10,-3.91339,-3.91339,0 1|1:11.4982:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 1|1:11.4982:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 1|1:23.5394:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:80.7352:25:0:0:25,0:926,0:-10,-7.52575,0,-10,-7.52575,-10 1|1:99:16:0:0:10,6:342,228:-10,-10,-10,-10,0,-10 1|1:99:21:0:0:9,12:341,453:-10,-10,-10,-10,0,-10 1|1:50.6321:15:0:0:15,0:546,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:62.6733:19:0:0:19,0:698,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:35.5806:10:0:0:10,0:378,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:50.6321:15:0:0:15,0:562,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:99:25:0:0:16,9:603,304:-10,-10,-10,-10,0,-10 1|1:44.6115:13:0:0:13,0:466,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:74.7145:23:0:0:23,0:867,0:-10,-6.92369,0,-10,-6.92369,-10 1|1:11.4982:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 1|1:99:8:0:0:4,4:152,148:-10,-10,-10,-10,0,-10 1|1:38.5909:11:0:0:11,0:418,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:62.6733:20:0:0:19,0:687,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:38.5909:11:0:0:11,0:405,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:17.5188:4:0:0:4,0:152,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:20.5291:5:0:0:5,0:190,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:99:12:0:0:7,5:264,187:-10,-10,-10,-10,0,-10 1|1:14.5085:3:0:0:3,0:105,0:-9.8,-0.90309,0,-9.8,-0.90309,-9.8 1|1:26.5497:7:0:0:7,0:259,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:65.6836:20:0:0:20,0:756,0:-10,-6.0206,0,-10,-6.0206,-10 1|1:20.5291:5:0:0:5,0:187,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:44.6115:13:0:0:13,0:487,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:20.5291:5:0:0:5,0:190,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:23.5394:6:0:0:6,0:221,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:62.6733:19:0:0:19,0:689,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:29.0479:15:0:0:0,15:0,544:-10,-10,-10,-4.51545,-4.51545,0 1|1:26.5497:7:0:0:7,0:233,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:74.7145:23:0:0:23,0:824,0:-10,-6.92369,0,-10,-6.92369,-10 1|1:53.6424:17:0:0:16,0:597,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:62.6733:19:0:0:19,0:719,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:80.7352:25:0:0:25,0:896,0:-10,-7.52575,0,-10,-7.52575,-10 1|1:99:18:0:0:4,14:152,500:-10,-10,-10,-10,0,-10 1|1:41.6012:12:0:0:12,0:438,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:99:36:0:0:36,0:1321,0:-10,-10,0,-10,-10,-10 1|1:62.6733:19:0:0:19,0:715,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:26.5497:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:83.7455:26:0:0:26,0:961,0:-10,-7.82678,0,-10,-7.82678,-10 1|1:20.5291:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:77.7248:24:0:0:24,0:861,0:-10,-7.22472,0,-10,-7.22472,-10 1|1:26.5497:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:35.5806:10:0:0:10,0:379,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:89.7654:28:0:0:28,0:1025,0:-10,-8.42884,0,-10,-8.42884,-10 1|1:32.5703:9:0:0:9,0:342,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:99:16:0:0:5,11:188,390:-10,-10,-10,-10,0,-10 1|1:20.5291:5:0:0:5,0:188,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:13.9964:10:0:0:0,10:0,351:-10,-10,-10,-3.0103,-3.0103,0 0|1:3.82814e-10:9:9:337:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 1|1:77.7248:24:0:0:24,0:854,0:-10,-7.22472,0,-10,-7.22472,-10 1|1:29.0479:16:0:0:0,15:0,531:-10,-10,-10,-4.51545,-4.51545,0 1|1:99:22:0:0:13,9:462,334:-10,-10,-10,-10,0,-10 1|1:65.6836:20:0:0:20,0:703,0:-10,-6.0206,0,-10,-6.0206,-10 1|1:32.5703:9:0:0:9,0:332,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:53.1303:23:0:0:0,23:0,843:-10,-10,-10,-6.92369,-6.92369,0 1|1:53.6424:16:0:0:16,0:596,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:41.6012:12:0:0:12,0:452,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:99:19:0:0:8,11:282,390:-10,-10,-10,-10,0,-10 1|1:32.5703:9:0:0:9,0:315,0:-10,-2.70927,0,-10,-2.70927,-10 0|1:1.96001e-07:18:18:649:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 1|1:68.6939:21:0:0:21,0:785,0:-10,-6.32163,0,-10,-6.32163,-10 0|1:99:16:11:412:5,0:190,0:-10,0,-10,-10,-10,-10 1|1:32.5703:9:0:0:9,0:321,0:-10,-2.70927,0,-10,-2.70927,-10 0|1:99:26:16:573:10,0:369,0:-10,0,-10,-10,-10,-10 1|1:26.5497:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:29.56:8:0:0:8,0:300,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:35.5806:10:0:0:10,0:353,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:20.5291:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:29.56:8:0:0:8,0:303,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:68.6939:21:0:0:21,0:773,0:-10,-6.32163,0,-10,-6.32163,-10 1|1:41.6012:12:0:0:12,0:446,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:50.6321:15:0:0:15,0:560,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:35.5806:10:0:0:10,0:380,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:99:19:0:0:3,16:113,576:-10,-10,-10,-10,0,-7.81342 1|1:8.48792:1:0:0:1,0:38,0:-3.8,-0.30103,0,-3.8,-0.30103,-3.8 1|1:29.56:8:0:0:8,0:282,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:29.56:8:0:0:8,0:294,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:89.5625:5:0:0:2,3:76,113:-10,-10,-10,-7.61794,0,-6.71485 1|1:44.6115:13:0:0:13,0:492,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:99:16:0:0:7,9:266,332:-10,-10,-10,-10,0,-10 1|1:68.6939:21:0:0:21,0:780,0:-10,-6.32163,0,-10,-6.32163,-10 scaffold_93 2291336 . C G 34721.5 . AB=0.556098;ABP=8.61376;AC=25;AF=0.13587;AN=184;AO=198;CIGAR=1X2M1X;DP=1237;DPB=1238;DPRA=1.1995;EPP=432.962;EPPR=3.6537;GTI=2;LEN=1;MEANALT=1.73684;MQM=59.904;MQMR=53.2222;NS=92;NUMALT=2;ODDS=0.364222;PAIRED=0;PAIREDR=0;PAO=1;PQA=37;PQR=0;PRO=0;QA=7202;QR=1971;RO=54;RPP=3.18577;RPPR=120.27;RUN=1;SAF=97;SAP=3.18577;SAR=101;SRF=29;SRP=3.6537;SRR=25;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:11.4982:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 0|0:26.5497:7:0:0:7,0:262,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:65.6836:20:0:0:20,0:745,0:-10,-6.0206,0,-10,-6.0206,-10 1|1:7.97577:8:0:0:0,8:0,304:-10,-10,-10,-2.40824,-2.40824,0 0|1:99:8:0:0:3,5:113,189:-10,-10,-10,-10,0,-9.88661 0|0:26.5497:7:0:0:7,0:263,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:56.6527:17:0:0:17,0:615,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:56.6527:18:0:0:17,0:620,0:-10,-5.11751,0,-10,-5.11751,-10 1|1:23.0273:13:0:0:0,13:0,485:-10,-10,-10,-3.91339,-3.91339,0 0|0:11.4982:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 0|0:11.4982:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 0|0:23.5394:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:80.7352:25:0:0:25,0:926,0:-10,-7.52575,0,-10,-7.52575,-10 0|1:99:16:0:0:10,6:342,228:-10,-10,-10,-10,0,-10 0|1:99:21:0:0:9,12:341,453:-10,-10,-10,-10,0,-10 0|0:50.6321:15:0:0:15,0:546,0:-10,-4.51545,0,-10,-4.51545,-10 0|0:62.6733:19:0:0:19,0:698,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:35.5806:10:0:0:10,0:378,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:50.6321:15:0:0:15,0:562,0:-10,-4.51545,0,-10,-4.51545,-10 0|1:99:25:0:0:16,9:603,304:-10,-10,-10,-10,0,-10 0|0:44.6115:13:0:0:13,0:466,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:74.7145:23:0:0:23,0:867,0:-10,-6.92369,0,-10,-6.92369,-10 0|0:11.4982:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 0|1:99:8:0:0:4,4:152,148:-10,-10,-10,-10,0,-10 0|0:38.5909:11:0:0:11,0:418,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:62.6733:20:0:0:19,0:687,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:38.5909:11:0:0:11,0:405,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:17.5188:4:0:0:4,0:152,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:20.5291:5:0:0:5,0:190,0:-10,-1.50515,0,-10,-1.50515,-10 0|1:99:12:0:0:7,5:264,187:-10,-10,-10,-10,0,-10 0|0:14.5085:3:0:0:3,0:105,0:-9.8,-0.90309,0,-9.8,-0.90309,-9.8 0|0:26.5497:7:0:0:7,0:259,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:65.6836:20:0:0:20,0:756,0:-10,-6.0206,0,-10,-6.0206,-10 0|0:20.5291:5:0:0:5,0:187,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:44.6115:13:0:0:13,0:487,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:20.5291:5:0:0:5,0:190,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:23.5394:6:0:0:6,0:221,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:62.6733:19:0:0:19,0:689,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:29.0479:15:0:0:0,15:0,544:-10,-10,-10,-4.51545,-4.51545,0 0|0:26.5497:7:0:0:7,0:233,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:74.7145:23:0:0:23,0:824,0:-10,-6.92369,0,-10,-6.92369,-10 0|0:53.6424:17:0:0:16,0:597,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:62.6733:19:0:0:19,0:719,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:80.7352:25:0:0:25,0:896,0:-10,-7.52575,0,-10,-7.52575,-10 0|1:99:18:0:0:4,14:152,500:-10,-10,-10,-10,0,-10 0|0:41.6012:12:0:0:12,0:438,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:99:36:0:0:36,0:1321,0:-10,-10,0,-10,-10,-10 0|0:62.6733:19:0:0:19,0:715,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:26.5497:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:83.7455:26:0:0:26,0:961,0:-10,-7.82678,0,-10,-7.82678,-10 0|0:20.5291:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:77.7248:24:0:0:24,0:861,0:-10,-7.22472,0,-10,-7.22472,-10 0|0:26.5497:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:35.5806:10:0:0:10,0:379,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:89.7654:28:0:0:28,0:1025,0:-10,-8.42884,0,-10,-8.42884,-10 0|0:32.5703:9:0:0:9,0:342,0:-10,-2.70927,0,-10,-2.70927,-10 0|1:99:16:0:0:5,11:188,390:-10,-10,-10,-10,0,-10 0|0:20.5291:5:0:0:5,0:188,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:13.9964:10:0:0:0,10:0,351:-10,-10,-10,-3.0103,-3.0103,0 0|0:3.82814e-10:9:9:337:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:77.7248:24:0:0:24,0:854,0:-10,-7.22472,0,-10,-7.22472,-10 1|1:29.0479:16:0:0:0,15:0,531:-10,-10,-10,-4.51545,-4.51545,0 0|1:99:22:0:0:13,9:462,334:-10,-10,-10,-10,0,-10 0|0:65.6836:20:0:0:20,0:703,0:-10,-6.0206,0,-10,-6.0206,-10 0|0:32.5703:9:0:0:9,0:332,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:53.1303:23:0:0:0,23:0,843:-10,-10,-10,-6.92369,-6.92369,0 0|0:53.6424:16:0:0:16,0:596,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:41.6012:12:0:0:12,0:452,0:-10,-3.61236,0,-10,-3.61236,-10 0|1:99:19:0:0:8,11:282,390:-10,-10,-10,-10,0,-10 0|0:32.5703:9:0:0:9,0:315,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:1.96001e-07:18:18:649:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:68.6939:21:0:0:21,0:785,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:99:16:11:412:5,0:190,0:-10,0,-10,-10,-10,-10 0|0:32.5703:9:0:0:9,0:321,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:99:26:16:573:10,0:369,0:-10,0,-10,-10,-10,-10 0|0:26.5497:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:29.56:8:0:0:8,0:300,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:35.5806:10:0:0:10,0:353,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:20.5291:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:29.56:8:0:0:8,0:303,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:68.6939:21:0:0:21,0:773,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:41.6012:12:0:0:12,0:446,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:50.6321:15:0:0:15,0:560,0:-10,-4.51545,0,-10,-4.51545,-10 0|0:35.5806:10:0:0:10,0:380,0:-10,-3.0103,0,-10,-3.0103,-10 0|1:99:19:0:0:3,16:113,576:-10,-10,-10,-10,0,-7.81342 0|0:8.48792:1:0:0:1,0:38,0:-3.8,-0.30103,0,-3.8,-0.30103,-3.8 0|0:29.56:8:0:0:8,0:282,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:29.56:8:0:0:8,0:294,0:-10,-2.40824,0,-10,-2.40824,-10 0|1:89.5625:5:0:0:2,3:76,113:-10,-10,-10,-7.61794,0,-6.71485 0|0:44.6115:13:0:0:13,0:492,0:-10,-3.91339,0,-10,-3.91339,-10 0|1:99:16:0:0:7,9:266,332:-10,-10,-10,-10,0,-10 0|0:68.6939:21:0:0:21,0:780,0:-10,-6.32163,0,-10,-6.32163,-10 scaffold_93 2291375 . C T 369.849 . AB=0.294118;ABP=21.7871;AC=1;AF=0.00543478;AN=184;AO=16;CIGAR=1X;DP=3040;DPB=3040;DPRA=1.65757;EPP=3.0103;EPPR=206.244;GTI=0;LEN=1;MEANALT=1;MQM=53.375;MQMR=58.1511;NS=92;NUMALT=1;ODDS=14.8534;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=601;QR=110407;RO=3024;RPP=37.7539;RPPR=6457.11;RUN=1;SAF=8;SAP=3.0103;SAR=8;SRF=1259;SRP=186.865;SRR=1765;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:99:16:16:540:0:0:0,-4.81648,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/0:99:19:19:720:0:0:0,-5.71957,-10 0/0:97.6172:15:15:547:0:0:0,-4.51545,-10 0/0:67.5178:5:5:179:0:0:0,-1.50515,-10 0/0:99:29:29:1049:0:0:0,-8.72987,-10 0/0:99:55:55:2027:0:0:0,-10,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:88.5894:12:12:445:0:0:0,-3.61236,-10 0/0:79.5589:9:9:335:0:0:0,-2.70927,-10 0/0:67.5178:5:5:186:0:0:0,-1.50515,-10 0/0:99:69:69:2535:0:0:0,-10,-10 0/0:99:46:46:1632:0:0:0,-10,-10 0/0:99:70:70:2560:0:0:0,-10,-10 0/0:88.5894:12:12:453:0:0:0,-3.61236,-10 0/1:99:51:36:1309:15:563:-10,0,-10 0/0:99:24:24:901:0:0:0,-7.22472,-10 0/0:99:37:37:1384:0:0:0,-10,-10 0/0:99:51:51:1833:0:0:0,-10,-10 0/0:99:17:17:594:0:0:0,-5.11751,-10 0/0:82.5692:10:10:378:0:0:0,-3.0103,-10 0/0:99:17:17:627:0:0:0,-5.11751,-10 0/0:99:46:46:1667:0:0:0,-10,-10 0/0:99:37:37:1383:0:0:0,-10,-10 0/0:99:50:50:1846:0:0:0,-10,-10 0/0:99:42:42:1583:0:0:0,-10,-10 0/0:99:16:16:587:0:0:0,-4.81648,-10 0/0:99:21:21:773:0:0:0,-6.32163,-10 0/0:99:44:44:1642:0:0:0,-10,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:88.5894:12:12:443:0:0:0,-3.61236,-10 0/0:99:46:46:1656:0:0:0,-10,-10 0/0:91.5993:13:13:463:0:0:0,-3.91339,-10 0/0:99:37:37:1354:0:0:0,-10,-10 0/0:88.5894:12:12:440:0:0:0,-3.61236,-10 0/0:99:16:16:531:0:0:0,-4.81648,-10 0/0:99:67:67:2484:0:0:0,-10,-10 0/0:99:25:25:907:0:0:0,-7.52575,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:99:35:35:1319:0:0:0,-10,-10 0/0:99:29:29:1047:0:0:0,-8.72987,-10 0/0:99:57:57:2079:0:0:0,-10,-10 0/0:99:35:35:1266:0:0:0,-10,-10 0/0:99:41:41:1483:0:0:0,-10,-10 0/0:99:79:79:2840:0:0:0,-10,-10 0/0:99:36:36:1351:0:0:0,-10,-10 0/0:99:28:28:1043:0:0:0,-8.42884,-10 0/0:99:52:52:1925:0:0:0,-10,-10 0/0:99:22:22:833:0:0:0,-6.62266,-10 0/0:99:65:65:2269:0:0:0,-10,-10 0/0:99:16:16:569:0:0:0,-4.81648,-10 0/0:85.5787:11:11:410:0:0:0,-3.31133,-10 0/0:99:68:68:2460:0:0:0,-10,-10 0/0:99:31:31:1126:0:0:0,-9.33193,-10 0/0:99:41:41:1522:0:0:0,-10,-10 0/0:99:17:17:644:0:0:0,-5.11751,-10 0/0:99:35:35:1195:0:0:0,-10,-10 0/0:99:21:21:748:0:0:0,-6.32163,-10 0/0:99:37:37:1347:0:0:0,-10,-10 0/0:99:56:56:1982:0:0:0,-10,-10 0/0:99:63:63:2282:0:0:0,-10,-10 0/0:99:19:19:699:0:0:0,-5.71957,-10 0/0:99:24:24:897:0:0:0,-7.22472,-10 0/0:99:69:69:2550:0:0:0,-10,-10 0/0:99:40:40:1481:0:0:0,-10,-10 0/0:76.5486:8:8:280:0:0:0,-2.40824,-10 0/0:99:50:50:1788:0:0:0,-10,-10 0/0:99:18:18:661:0:0:0,-5.41854,-10 0/0:99:23:23:834:0:0:0,-6.92369,-10 0/0:99:46:46:1675:0:0:0,-10,-10 0/0:99:37:37:1357:0:0:0,-10,-10 0/0:99:36:36:1298:0:0:0,-10,-10 0/0:99:41:41:1460:0:0:0,-10,-10 0/0:99:24:24:906:0:0:0,-7.22472,-10 0/0:99:16:16:602:0:0:0,-4.81648,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 0/0:88.5894:12:12:430:0:0:0,-3.61236,-10 0/0:99:18:18:679:0:0:0,-5.41854,-10 0/0:99:57:56:2024:1:38:0,-10,-10 0/0:99:50:50:1839:0:0:0,-10,-10 0/0:99:57:57:2114:0:0:0,-10,-10 0/0:99:41:41:1515:0:0:0,-10,-10 0/0:99:41:41:1489:0:0:0,-10,-10 0/0:99:19:19:679:0:0:0,-5.71957,-10 0/0:99:27:27:965:0:0:0,-8.12781,-10 0/0:64.5075:4:4:151:0:0:0,-1.20412,-10 0/0:99:16:16:571:0:0:0,-4.81648,-10 0/0:99:39:39:1443:0:0:0,-10,-10 0/0:99:53:53:1945:0:0:0,-10,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 scaffold_93 2432324 . T C 19161.6 . AB=0.489362;ABP=3.37991;AC=75;AF=0.407609;AN=184;AO=656;CIGAR=1X;DP=1576;DPB=1576;DPRA=1.20455;EPP=5.24798;EPPR=3.95442;GTI=4;LEN=1;MEANALT=1;MQM=59.8963;MQMR=60;NS=92;NUMALT=1;ODDS=0.13367;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=24383;QR=33860;RO=920;RPP=1367.34;RPPR=1923.36;RUN=1;SAF=334;SAP=3.48696;SAR=322;SRF=461;SRP=3.01974;SRR=459;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:34.6362:13:0:0:13:486:-10,-3.91339,0 1/1:16.5744:7:0:0:7:260:-10,-2.10721,0 0/0:68.8485:23:23:866:0:0:0,-6.92369,-10 0/0:29.7147:10:10:374:0:0:0,-3.0103,-10 0/1:99:15:9:318:6:225:-10,0,-10 0/0:23.6941:8:8:304:0:0:0,-2.40824,-10 0/1:99:34:16:595:18:681:-10,0,-10 1/1:76.7804:27:0:0:27:952:-10,-8.12781,0 0/0:35.7353:12:12:456:0:0:0,-3.61236,-10 0/1:0.0590277:1:0:0:1:38:-3.8,-0.30103,0 1/1:31.6259:12:0:0:12:447:-10,-3.61236,0 0/0:29.7147:10:10:375:0:0:0,-3.0103,-10 0/1:99:35:21:717:14:531:-10,0,-10 1/1:99:40:0:0:40:1491:-10,-10,0 0/1:99:29:14:499:15:536:-10,0,-10 0/1:99:18:11:418:7:246:-10,0,-10 0/1:99:16:9:342:7:266:-10,0,-10 1/1:28.6156:11:0:0:11:393:-10,-3.31133,0 0/0:56.8074:19:19:706:0:0:0,-5.71957,-10 1/1:99:36:0:0:36:1358:-10,-10,0 0/0:50.7868:17:17:632:0:0:0,-5.11751,-10 0/0:68.8485:23:23:829:0:0:0,-6.92369,-10 1/1:25.6053:10:0:0:10:357:-10,-3.0103,0 0/0:53.7971:18:18:665:0:0:0,-5.41854,-10 1/1:25.6053:10:0:0:10:378:-10,-3.0103,0 0/0:59.8177:20:20:751:0:0:0,-6.0206,-10 0/0:44.7662:15:15:544:0:0:0,-4.51545,-10 1/1:34.6362:13:0:0:13:483:-10,-3.91339,0 0/0:62.828:21:21:763:0:0:0,-6.32163,-10 0/1:99:24:11:416:13:492:-10,0,-10 0/1:0.326106:2:2:76:0:0:0,-0.60206,-7.22 0/0:14.6632:5:5:184:0:0:0,-1.50515,-10 0/0:41.7559:14:14:528:0:0:0,-4.21442,-10 1/1:40.6568:15:0:0:15:548:-10,-4.51545,0 1/1:43.6671:16:0:0:16:594:-10,-4.81648,0 1/1:10.5538:5:0:0:5:188:-10,-1.50515,0 0/0:23.6941:8:8:281:0:0:0,-2.40824,-10 0/1:99:24:10:342:14:510:-10,0,-10 1/1:49.6877:18:0:0:18:679:-10,-5.41854,0 1/1:28.6156:11:0:0:11:413:-10,-3.31133,0 0/0:86.9099:29:29:1086:0:0:0,-8.72987,-10 0/0:44.7662:15:15:570:0:0:0,-4.51545,-10 0/0:38.7456:13:13:465:0:0:0,-3.91339,-10 1/1:76.7804:27:0:0:27:1005:-10,-8.12781,0 0/0:53.7971:18:18:667:0:0:0,-5.41854,-10 0/0:32.725:11:11:418:0:0:0,-3.31133,-10 0/0:99:46:46:1684:0:0:0,-10,-10 0/0:59.8177:20:20:736:0:0:0,-6.0206,-10 0/0:41.7559:14:14:532:0:0:0,-4.21442,-10 1/1:82.801:29:0:0:29:1089:-10,-8.72987,0 0/0:32.725:11:11:396:0:0:0,-3.31133,-10 0/1:99:28:16:571:12:427:-10,0,-10 0/0:14.6632:5:5:186:0:0:0,-1.50515,-10 0/1:0.678702:3:3:114:0:0:0,-0.90309,-10 0/0:99:35:35:1303:0:0:0,-10,-10 0/0:35.7353:12:12:442:0:0:0,-3.61236,-10 0/0:47.7765:16:16:600:0:0:0,-4.81648,-10 0/0:20.6838:7:7:253:0:0:0,-2.10721,-10 1/1:52.698:19:0:0:19:703:-10,-5.71957,0 1/1:31.6259:12:0:0:12:455:-10,-3.61236,0 0/0:68.8485:23:23:852:0:0:0,-6.92369,-10 0/0:29.7147:10:10:380:0:0:0,-3.0103,-10 1/1:99:44:0:0:44:1655:-10,-10,0 0/0:44.7662:15:15:544:0:0:0,-4.51545,-10 1/1:22.595:9:0:0:9:324:-10,-2.70927,0 1/1:61.7289:22:0:0:22:827:-10,-6.62266,0 1/1:43.6671:16:0:0:16:600:-10,-4.81648,0 0/0:32.725:11:11:409:0:0:0,-3.31133,-10 0/1:99:25:10:358:15:569:-10,0,-10 1/1:10.5538:5:0:0:5:167:-10,-1.50515,0 0/0:35.7353:12:12:430:0:0:0,-3.61236,-10 0/0:71.8589:24:24:866:0:0:0,-7.22472,-10 0/0:38.7456:13:13:485:0:0:0,-3.91339,-10 0/0:47.7765:16:16:606:0:0:0,-4.81648,-10 0/1:99:27:17:601:10:366:-10,0,-10 1/1:19.5847:8:0:0:8:297:-10,-2.40824,0 0/0:50.7868:17:17:619:0:0:0,-5.11751,-10 1/1:31.6259:12:0:0:12:456:-10,-3.61236,0 0/1:0.678702:3:3:114:0:0:0,-0.90309,-10 1/1:34.6362:13:0:0:13:494:-10,-3.91339,0 0/1:99:35:12:456:23:863:-10,0,-10 0/0:71.8589:24:24:872:0:0:0,-7.22472,-10 0/1:99:29:21:758:8:302:-10,0,-10 0/0:44.7662:15:15:566:0:0:0,-4.51545,-10 0/1:99:23:10:376:13:478:-10,0,-10 1/1:31.6259:12:0:0:12:451:-10,-3.61236,0 0/0:47.7765:16:16:605:0:0:0,-4.81648,-10 0/0:23.6941:8:8:300:0:0:0,-2.40824,-10 0/0:8.64256:3:3:92:0:0:0,-0.90309,-8.58667 0/1:99:13:5:183:8:303:-10,0,-10 0/0:47.7765:16:16:586:0:0:0,-4.81648,-10 0/0:65.8383:22:22:798:0:0:0,-6.62266,-10 scaffold_93 2811587 . AG A 14384.7 . AB=0.65;ABP=6.91895;AC=1;AF=0.00549451;AN=182;AO=13;CIGAR=1M1D1M;DP=1549;DPB=1545.33;DPRA=1.23239;EPP=23.2217;EPPR=3.01243;GTI=1;LEN=1;MEANALT=1;MQM=59.1538;MQMR=59.8921;NS=91;NUMALT=2;ODDS=0.282337;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=0;PQR=0;PRO=0.5;QA=420;QR=36831;RO=1019;RPP=31.2394;RPPR=2215.74;RUN=1;SAF=12;SAP=23.2217;SAR=1;SRF=509;SRP=3.01243;SRR=510;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:46.3935:15:2:59:13,0:492,0:-10,0,-3.11074,-10,-7.02413,-10 0|0:21.1818:7:7:256:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|0:54.2951:18:18:642:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:27.2024:9:9:336:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:24.1921:8:8:300:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:27.2024:9:9:332:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:99:33:33:1215:0,0:0,0:0,-9.93399,-10,-9.93399,-10,-10 0|0:70.9852:26:0:0:26,0:971,0:-10,-7.82678,0,-10,-7.82678,-10 0|0:39.2436:13:13:468:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:0.974207:2:2:76:0,0:0,0:0,-0.60206,-7.22,-0.60206,-7.22,-7.22 0|0:27.2024:9:9:306:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:9.14059:3:3:104:0,0:0,0:0,-0.90309,-9.70667,-0.90309,-9.70667,-9.70667 0|1:99:20:7:260:0,13:0,420:-10,-10,-10,0,-10,-10 0|0:93.4279:31:31:1149:0,0:0,0:0,-9.33193,-10,-9.33193,-10,-10 0|0:60.3157:20:20:658:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:99:11:7:260:4,0:152,0:-10,0,-10,-10,-10,-10 0|0:75.3672:25:25:884:0,0:0,0:0,-7.52575,-10,-7.52575,-10,-10 0|0:30.2127:10:10:376:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:99:14:5:187:9,0:296,0:-10,0,-10,-10,-10,-10 0|0:99:22:14:486:8,0:303,0:-10,0,-10,-10,-10,-10 0|0:20.7404:15:1:36:14,0:495,0:-10,0,-0.260641,-10,-4.47506,-10 0|0:99:38:38:1385:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:13.7895:7:0:0:7,0:236,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:54.2951:18:18:646:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:25.8307:11:0:0:11,0:415,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:81.3877:27:27:981:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:16.7998:9:0:0:8,0:276,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:33.223:11:11:401:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:72.3569:24:24:876:0,0:0,0:0,-7.22472,-10,-7.22472,-10,-10 0|0:99:28:12:427:16,0:561,0:-10,0,-10,-10,-10,-10 0|0:15.1612:5:5:180:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:33.4176:11:1:38:10,0:369,0:-10,0,-1.53006,-10,-4.54036,-10 0|0:33.223:11:11:384:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:36.2333:13:12:438:0,0:0,0:0,-3.61236,-10,-3.61236,-10,-10 0|0:30.2127:10:10:369:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:12.1509:4:4:150:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:33.223:11:11:383:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:48.2745:16:16:577:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:31.8513:13:0:0:13,0:465,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:99:9:3:114:6,0:182,0:-10,0,-9.85501,-10,-10,-10 0|0:99:27:14:525:13,0:443,0:-10,0,-10,-10,-10,-10 0|0:54.2951:18:18:665:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:37.8719:15:0:0:15,0:561,0:-10,-4.51545,0,-10,-4.51545,-10 0|0:99:20:8:291:12,0:428,0:-10,0,-10,-10,-10,-10 0|0:63.326:21:21:761:0,0:0,0:0,-6.32163,-10,-6.32163,-10,-10 0|0:99:14:9:336:5,0:178,0:-10,0,-10,-10,-10,-10 0|0:99:50:24:873:26,0:965,0:-10,0,-10,-10,-10,-10 0|0:49.9131:19:0:0:19,0:713,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:31.8513:13:0:0:13,0:480,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:99:42:0:0:42,0:1566,0:-10,-10,0,-10,-10,-10 0|0:31.8513:13:0:0:13,0:492,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:93.4279:31:31:1128:0,0:0,0:0,-9.33193,-10,-9.33193,-10,-10 0|0:28.841:12:0:0:12,0:408,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:18.1715:6:6:195:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|0:99:40:19:686:21,0:784,0:-10,0,-10,-10,-10,-10 0|0:30.2127:10:10:373:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:99:26:13:438:13,0:479,0:-10,0,-10,-10,-10,-10 0|0:15.1612:5:5:177:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:30.2127:10:10:349:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:12.1509:4:4:149:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:99:33:22:784:11,0:386,0:-10,0,-10,-10,-10,-10 0|0:46.9028:18:0:0:18,0:680,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:84.398:28:28:1030:0,0:0,0:0,-8.42884,-10,-8.42884,-10,-10 0|0:99:21:7:225:14,0:524,0:-10,0,-10,-10,-10,-10 0|0:33.223:11:11:395:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:69.3466:23:23:809:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:78.3775:26:26:905:0,0:0,0:0,-7.82678,-10,-7.82678,-10,-10 0|0:18.1715:6:6:211:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|0:95.066:34:0:0:34,0:1186,0:-10,-10,0,-10,-10,-10 0|0:19.8101:9:0:0:9,0:335,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:60.3157:20:20:724:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:81.3877:27:27:962:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:81.3877:28:27:1001:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:39.2436:13:13:484:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:96.4372:32:32:1146:0,0:0,0:0,-9.63296,-10,-9.63296,-10,-10 0|0:43.8925:17:0:0:17,0:583,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:42.2539:14:14:522:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 .:.:.:.:.:.:.:. 0|0:16.7998:8:0:0:8,0:281,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:33.223:11:11:387:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:40.8822:16:0:0:16,0:587,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:99:39:39:1423:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:54.2951:18:18:665:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:99:17:10:366:7,0:263,0:-10,0,-10,-10,-10,-10 0|0:55.9337:21:0:0:21,0:749,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:12.1509:4:4:151:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:45.2642:15:15:564:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:30.2127:10:10:355:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:79.6361:7:2:76:5,0:190,0:-10,0,-6.43501,-10,-7.94016,-10 0|0:33.223:11:11:413:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:99:11:6:221:5,0:164,0:-10,0,-10,-10,-10,-10 0|0:27.2024:9:9:327:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 scaffold_93 2811589 . G A 14384.7 . AB=0.542199;ABP=9.05821;AC=56;AF=0.307692;AN=182;AO=514;CIGAR=2M1X;DP=1549;DPB=1545.33;DPRA=1.17089;EPP=6.81249;EPPR=3.01243;GTI=1;LEN=1;MEANALT=1.02703;MQM=59.9961;MQMR=59.8921;NS=91;NUMALT=2;ODDS=0.282337;PAIRED=0;PAIREDR=0;PAO=1;PQA=37;PQR=0;PRO=0.5;QA=18638;QR=36831;RO=1019;RPP=1119.15;RPPR=2215.74;RUN=1;SAF=272;SAP=6.81249;SAR=242;SRF=509;SRP=3.01243;SRR=510;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|1:46.3935:15:2:59:13,0:492,0:-10,0,-3.11074,-10,-7.02413,-10 0|0:21.1818:7:7:256:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|0:54.2951:18:18:642:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:27.2024:9:9:336:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:24.1921:8:8:300:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:27.2024:9:9:332:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:99:33:33:1215:0,0:0,0:0,-9.93399,-10,-9.93399,-10,-10 1|1:70.9852:26:0:0:26,0:971,0:-10,-7.82678,0,-10,-7.82678,-10 0|0:39.2436:13:13:468:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|1:0.974207:2:2:76:0,0:0,0:0,-0.60206,-7.22,-0.60206,-7.22,-7.22 0|0:27.2024:9:9:306:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:9.14059:3:3:104:0,0:0,0:0,-0.90309,-9.70667,-0.90309,-9.70667,-9.70667 0|0:99:20:7:260:0,13:0,420:-10,-10,-10,0,-10,-10 0|0:93.4279:31:31:1149:0,0:0,0:0,-9.33193,-10,-9.33193,-10,-10 0|0:60.3157:20:20:658:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|1:99:11:7:260:4,0:152,0:-10,0,-10,-10,-10,-10 0|0:75.3672:25:25:884:0,0:0,0:0,-7.52575,-10,-7.52575,-10,-10 0|0:30.2127:10:10:376:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|1:99:14:5:187:9,0:296,0:-10,0,-10,-10,-10,-10 0|1:99:22:14:486:8,0:303,0:-10,0,-10,-10,-10,-10 0|1:20.7404:15:1:36:14,0:495,0:-10,0,-0.260641,-10,-4.47506,-10 0|0:99:38:38:1385:0,0:0,0:0,-10,-10,-10,-10,-10 1|1:13.7895:7:0:0:7,0:236,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:54.2951:18:18:646:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 1|1:25.8307:11:0:0:11,0:415,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:81.3877:27:27:981:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 1|1:16.7998:9:0:0:8,0:276,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:33.223:11:11:401:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:72.3569:24:24:876:0,0:0,0:0,-7.22472,-10,-7.22472,-10,-10 0|1:99:28:12:427:16,0:561,0:-10,0,-10,-10,-10,-10 0|0:15.1612:5:5:180:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|1:33.4176:11:1:38:10,0:369,0:-10,0,-1.53006,-10,-4.54036,-10 0|0:33.223:11:11:384:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:36.2333:13:12:438:0,0:0,0:0,-3.61236,-10,-3.61236,-10,-10 0|0:30.2127:10:10:369:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:12.1509:4:4:150:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:33.223:11:11:383:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:48.2745:16:16:577:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 1|1:31.8513:13:0:0:13,0:465,0:-10,-3.91339,0,-10,-3.91339,-10 0|1:99:9:3:114:6,0:182,0:-10,0,-9.85501,-10,-10,-10 0|1:99:27:14:525:13,0:443,0:-10,0,-10,-10,-10,-10 0|0:54.2951:18:18:665:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 1|1:37.8719:15:0:0:15,0:561,0:-10,-4.51545,0,-10,-4.51545,-10 0|1:99:20:8:291:12,0:428,0:-10,0,-10,-10,-10,-10 0|0:63.326:21:21:761:0,0:0,0:0,-6.32163,-10,-6.32163,-10,-10 0|1:99:14:9:336:5,0:178,0:-10,0,-10,-10,-10,-10 0|1:99:50:24:873:26,0:965,0:-10,0,-10,-10,-10,-10 1|1:49.9131:19:0:0:19,0:713,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:31.8513:13:0:0:13,0:480,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:99:42:0:0:42,0:1566,0:-10,-10,0,-10,-10,-10 1|1:31.8513:13:0:0:13,0:492,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:93.4279:31:31:1128:0,0:0,0:0,-9.33193,-10,-9.33193,-10,-10 1|1:28.841:12:0:0:12,0:408,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:18.1715:6:6:195:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|1:99:40:19:686:21,0:784,0:-10,0,-10,-10,-10,-10 0|0:30.2127:10:10:373:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|1:99:26:13:438:13,0:479,0:-10,0,-10,-10,-10,-10 0|0:15.1612:5:5:177:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:30.2127:10:10:349:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:12.1509:4:4:149:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|1:99:33:22:784:11,0:386,0:-10,0,-10,-10,-10,-10 1|1:46.9028:18:0:0:18,0:680,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:84.398:28:28:1030:0,0:0,0:0,-8.42884,-10,-8.42884,-10,-10 0|1:99:21:7:225:14,0:524,0:-10,0,-10,-10,-10,-10 0|0:33.223:11:11:395:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:69.3466:23:23:809:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:78.3775:26:26:905:0,0:0,0:0,-7.82678,-10,-7.82678,-10,-10 0|0:18.1715:6:6:211:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 1|1:95.066:34:0:0:34,0:1186,0:-10,-10,0,-10,-10,-10 1|1:19.8101:9:0:0:9,0:335,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:60.3157:20:20:724:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:81.3877:27:27:962:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:81.3877:28:27:1001:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:39.2436:13:13:484:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:96.4372:32:32:1146:0,0:0,0:0,-9.63296,-10,-9.63296,-10,-10 1|1:43.8925:17:0:0:17,0:583,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:42.2539:14:14:522:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 .:.:.:.:.:.:.:. 1|1:16.7998:8:0:0:8,0:281,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:33.223:11:11:387:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 1|1:40.8822:16:0:0:16,0:587,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:99:39:39:1423:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:54.2951:18:18:665:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|1:99:17:10:366:7,0:263,0:-10,0,-10,-10,-10,-10 1|1:55.9337:21:0:0:21,0:749,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:12.1509:4:4:151:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:45.2642:15:15:564:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:30.2127:10:10:355:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|1:79.6361:7:2:76:5,0:190,0:-10,0,-6.43501,-10,-7.94016,-10 0|0:33.223:11:11:413:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|1:99:11:6:221:5,0:164,0:-10,0,-10,-10,-10,-10 0|0:27.2024:9:9:327:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 scaffold_93 2811620 . A C 2746.52 . AB=0.591716;ABP=15.3581;AC=7;AF=0.0384615;AN=182;AO=101;CIGAR=1X;DP=1568;DPB=1568;DPRA=1.52551;EPP=3.54779;EPPR=5.38349;GTI=1;LEN=1;MEANALT=1.125;MQM=59.5446;MQMR=59.9303;NS=91;NUMALT=1;ODDS=0.401407;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3631;QR=53961;RO=1464;RPP=151.122;RPPR=2985.41;RUN=1;SAF=46;SAP=4.75178;SAR=55;SRF=747;SRP=4.34522;SRR=717;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.4473:16:16:563:0:0:0,-4.81648,-10 0/0:22.3546:7:7:248:0:0:0,-2.10721,-10 0/1:99:18:7:261:11:378:-10,0,-10 0/0:28.3752:9:9:342:0:0:0,-2.70927,-10 0/0:22.3546:7:7:266:0:0:0,-2.10721,-10 0/0:28.3752:9:9:339:0:0:0,-2.70927,-10 0/1:99:33:13:488:20:739:-10,0,-10 0/0:79.5502:26:26:973:0:0:0,-7.82678,-10 0/0:40.4164:13:13:483:0:0:0,-3.91339,-10 0/0:7.30307:2:2:76:0:0:0,-0.60206,-7.22 0/0:28.3752:9:9:330:0:0:0,-2.70927,-10 0/0:10.3134:3:3:112:0:0:0,-0.90309,-10 0/1:99:29:7:265:22:769:-10,0,-10 0/0:94.5989:31:31:1161:0:0:0,-9.33193,-10 0/0:61.4885:20:20:751:0:0:0,-6.0206,-10 0/0:34.3958:11:11:410:0:0:0,-3.31133,-10 0/1:99:25:15:553:10:365:-10,0,-10 0/0:31.3855:10:10:358:0:0:0,-3.0103,-10 0/0:43.4267:14:14:532:0:0:0,-4.21442,-10 0/0:67.5091:22:22:812:0:0:0,-6.62266,-10 0/0:46.437:15:15:544:0:0:0,-4.51545,-10 0/0:99:38:38:1413:0:0:0,-10,-10 0/0:22.3546:7:7:249:0:0:0,-2.10721,-10 0/0:55.4679:18:18:672:0:0:0,-5.41854,-10 0/0:34.3958:11:11:417:0:0:0,-3.31133,-10 0/0:82.5606:27:27:992:0:0:0,-8.12781,-10 0/0:28.3752:9:9:295:0:0:0,-2.70927,-10 0/0:34.3958:11:11:417:0:0:0,-3.31133,-10 0/0:70.5194:24:23:873:0:0:0,-6.92369,-10 0/0:85.5709:28:28:990:0:0:0,-8.42884,-10 0/0:16.334:5:5:179:0:0:0,-1.50515,-10 0/0:34.3958:11:11:368:0:0:0,-3.31133,-10 0/0:34.3958:11:11:411:0:0:0,-3.31133,-10 0/0:40.4164:13:13:486:0:0:0,-3.91339,-10 0/0:37.4061:12:12:431:0:0:0,-3.61236,-10 0/0:13.3237:4:4:139:0:0:0,-1.20412,-10 0/0:34.3958:11:11:378:0:0:0,-3.31133,-10 0/0:49.4473:16:16:588:0:0:0,-4.81648,-10 0/0:43.4267:14:14:506:0:0:0,-4.21442,-10 0/0:28.3752:9:9:314:0:0:0,-2.70927,-10 0/0:85.5709:28:28:1034:0:0:0,-8.42884,-10 0/0:55.4679:18:18:656:0:0:0,-5.41854,-10 0/0:46.437:15:15:563:0:0:0,-4.51545,-10 0/0:64.4988:21:21:759:0:0:0,-6.32163,-10 0/0:64.4988:21:21:786:0:0:0,-6.32163,-10 0/0:43.4267:14:14:505:0:0:0,-4.21442,-10 0/0:99:51:50:1832:0:0:0,-10,-10 0/0:58.4782:19:19:717:0:0:0,-5.71957,-10 0/0:40.4164:13:13:482:0:0:0,-3.91339,-10 0/0:99:43:43:1596:0:0:0,-10,-10 0/0:40.4164:13:13:491:0:0:0,-3.91339,-10 0/0:71.6112:32:30:1108:1:14:0,-6.59057,-10 0/0:37.4061:12:12:435:0:0:0,-3.61236,-10 0/0:19.3443:6:6:206:0:0:0,-1.80618,-10 0/0:99:40:40:1453:0:0:0,-10,-10 0/0:31.3855:10:10:380:0:0:0,-3.0103,-10 0/0:79.5502:26:26:939:0:0:0,-7.82678,-10 0/0:16.334:5:5:188:0:0:0,-1.50515,-10 0/0:31.3855:10:10:351:0:0:0,-3.0103,-10 0/0:13.3237:4:4:152:0:0:0,-1.20412,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:55.4679:18:18:682:0:0:0,-5.41854,-10 0/1:99:28:12:421:16:597:-10,0,-10 0/0:64.4988:21:21:780:0:0:0,-6.32163,-10 0/0:37.4061:12:12:456:0:0:0,-3.61236,-10 0/0:70.5194:23:23:856:0:0:0,-6.92369,-10 0/1:99:26:15:512:11:413:-10,0,-10 0/0:19.3443:6:6:222:0:0:0,-1.80618,-10 0/0:99:34:34:1252:0:0:0,-10,-10 0/0:28.3752:9:9:342:0:0:0,-2.70927,-10 0/0:61.4885:20:20:755:0:0:0,-6.0206,-10 0/0:82.5606:27:27:998:0:0:0,-8.12781,-10 0/0:88.5804:29:29:1098:0:0:0,-8.72987,-10 0/0:40.4164:13:13:488:0:0:0,-3.91339,-10 0/0:97.6062:32:32:1200:0:0:0,-9.63296,-10 0/0:52.4576:17:17:628:0:0:0,-5.11751,-10 0/0:43.4267:14:14:530:0:0:0,-4.21442,-10 .:.:.:.:.:.:.:. 0/0:25.3649:8:8:300:0:0:0,-2.40824,-10 0/0:34.3958:11:11:410:0:0:0,-3.31133,-10 0/0:49.4473:16:16:598:0:0:0,-4.81648,-10 0/0:99:39:39:1448:0:0:0,-10,-10 0/0:55.4679:18:18:678:0:0:0,-5.41854,-10 0/0:52.4576:17:17:623:0:0:0,-5.11751,-10 0/0:64.4988:21:21:747:0:0:0,-6.32163,-10 0/0:13.3237:4:4:152:0:0:0,-1.20412,-10 0/0:46.437:15:15:569:0:0:0,-4.51545,-10 0/1:0.903548:10:0:0:10:356:-10,-3.0103,0 0/0:22.3546:7:7:264:0:0:0,-2.10721,-10 0/0:34.3958:11:11:418:0:0:0,-3.31133,-10 0/0:34.3958:11:11:386:0:0:0,-3.31133,-10 0/0:28.3752:9:9:339:0:0:0,-2.70927,-10 scaffold_93 2938235 . T C 467.524 . AB=0.740741;ABP=16.6021;AC=2;AF=0.0108696;AN=184;AO=20;CIGAR=1X;DP=1511;DPB=1511;DPRA=0.818733;EPP=4.74748;EPPR=6.22746;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9363;NS=92;NUMALT=1;ODDS=6.5354;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=746;QR=55402;RO=1491;RPP=46.4397;RPPR=3128.74;RUN=1;SAF=12;SAP=4.74748;SAR=8;SRF=780;SRP=9.94416;SRR=711;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.2656:11:11:404:0:0:0,-3.31133,-10 0/0:35.1935:4:4:152:0:0:0,-1.20412,-10 0/0:77.3377:18:18:684:0:0:0,-5.41854,-10 0/0:53.2553:10:10:367:0:0:0,-3.0103,-10 0/0:41.2141:6:6:213:0:0:0,-1.80618,-10 0/0:38.2038:5:5:163:0:0:0,-1.50515,-10 0/0:99:37:37:1388:0:0:0,-10,-10 0/0:83.3583:20:20:760:0:0:0,-6.0206,-10 0/0:50.245:9:9:341:0:0:0,-2.70927,-10 0/0:35.1935:4:4:150:0:0:0,-1.20412,-10 0/0:32.1832:3:3:114:0:0:0,-0.90309,-10 0/0:47.2347:8:8:285:0:0:0,-2.40824,-10 0/0:83.3583:20:20:737:0:0:0,-6.0206,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:99:28:28:1050:0:0:0,-8.42884,-10 0/0:86.3686:21:21:794:0:0:0,-6.32163,-10 0/0:83.3583:20:20:733:0:0:0,-6.0206,-10 0/0:44.2244:7:7:266:0:0:0,-2.10721,-10 0/0:92.3884:23:23:849:0:0:0,-6.92369,-10 0/0:92.3884:23:23:869:0:0:0,-6.92369,-10 0/0:68.3068:15:15:528:0:0:0,-4.51545,-10 0/0:99:36:36:1354:0:0:0,-10,-10 0/0:44.2244:7:7:266:0:0:0,-2.10721,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:77.3377:18:18:669:0:0:0,-5.41854,-10 0/0:65.2965:14:14:512:0:0:0,-4.21442,-10 0/0:62.2862:13:13:494:0:0:0,-3.91339,-10 0/0:47.2347:8:8:304:0:0:0,-2.40824,-10 0/0:77.3377:18:18:674:0:0:0,-5.41854,-10 0/0:98.41:25:25:907:0:0:0,-7.52575,-10 0/0:32.1832:3:3:114:0:0:0,-0.90309,-10 0/0:53.2553:10:10:378:0:0:0,-3.0103,-10 0/0:74.3274:17:17:646:0:0:0,-5.11751,-10 0/0:38.2038:5:5:190:0:0:0,-1.50515,-10 0/0:89.3785:22:22:820:0:0:0,-6.62266,-10 0/0:35.1935:4:4:152:0:0:0,-1.20412,-10 0/0:74.3274:17:17:632:0:0:0,-5.11751,-10 0/0:99:27:27:1026:0:0:0,-8.12781,-10 0/0:65.2965:14:14:531:0:0:0,-4.21442,-10 0/0:65.2965:14:14:517:0:0:0,-4.21442,-10 0/0:77.3377:18:18:648:0:0:0,-5.41854,-10 0/0:86.3686:21:21:797:0:0:0,-6.32163,-10 0/0:77.3377:18:18:682:0:0:0,-5.41854,-10 0/0:99:30:30:1076:0:0:0,-9.0309,-10 0/0:59.2759:12:12:438:0:0:0,-3.61236,-10 0/0:59.2759:12:12:432:0:0:0,-3.61236,-10 0/0:99:34:34:1239:0:0:0,-10,-10 0/0:83.3583:20:20:760:0:0:0,-6.0206,-10 0/0:56.2656:11:11:405:0:0:0,-3.31133,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:47.2347:8:8:293:0:0:0,-2.40824,-10 0/0:99:33:33:1250:0:0:0,-9.93399,-10 0/0:62.2862:13:13:490:0:0:0,-3.91339,-10 0/0:44.2244:7:7:262:0:0:0,-2.10721,-10 0/0:99:34:34:1278:0:0:0,-10,-10 0/0:68.3068:15:15:549:0:0:0,-4.51545,-10 0/0:77.3377:18:18:630:0:0:0,-5.41854,-10 0/0:44.2244:7:7:254:0:0:0,-2.10721,-10 0/0:56.2656:11:11:417:0:0:0,-3.31133,-10 0/0:83.3583:20:20:710:0:0:0,-6.0206,-10 0/0:99:37:37:1382:0:0:0,-10,-10 0/0:62.2862:13:13:448:0:0:0,-3.91339,-10 0/0:99:31:31:1153:0:0:0,-9.33193,-10 0/0:53.2553:10:10:380:0:0:0,-3.0103,-10 0/0:53.2553:10:10:375:0:0:0,-3.0103,-10 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/0:99:28:28:1056:0:0:0,-8.42884,-10 0/0:62.2862:13:13:478:0:0:0,-3.91339,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:50.245:9:9:342:0:0:0,-2.70927,-10 0/0:62.2862:13:13:490:0:0:0,-3.91339,-10 0/0:92.3884:23:23:872:0:0:0,-6.92369,-10 0/0:59.2759:12:12:430:0:0:0,-3.61236,-10 0/1:0.00627643:15:0:0:15:566:-10,-4.51545,0 0/1:99:12:7:266:5:180:-10,0,-10 0/0:59.2759:12:12:456:0:0:0,-3.61236,-10 0/0:80.348:19:19:722:0:0:0,-5.71957,-10 0/0:65.2965:14:14:532:0:0:0,-4.21442,-10 0/0:35.1935:4:4:129:0:0:0,-1.20412,-10 0/0:53.2553:10:10:376:0:0:0,-3.0103,-10 0/0:99:40:40:1513:0:0:0,-10,-10 0/0:65.2965:14:14:484:0:0:0,-4.21442,-10 0/0:95.3979:24:24:912:0:0:0,-7.22472,-10 0/0:74.3274:17:17:646:0:0:0,-5.11751,-10 0/0:80.348:19:19:703:0:0:0,-5.71957,-10 0/0:41.2141:6:6:226:0:0:0,-1.80618,-10 0/0:44.2244:7:7:262:0:0:0,-2.10721,-10 0/0:59.2759:12:12:440:0:0:0,-3.61236,-10 0/0:44.2244:7:7:266:0:0:0,-2.10721,-10 0/0:62.2862:13:13:472:0:0:0,-3.91339,-10 0/0:53.2553:10:10:371:0:0:0,-3.0103,-10 0/0:38.2038:5:5:180:0:0:0,-1.50515,-10 scaffold_101 17833 . T C 632.3 . AB=0.722222;ABP=18.4519;AC=2;AF=0.0108696;AN=184;AO=28;CIGAR=1X;DP=2103;DPB=2103;DPRA=1.12144;EPP=7.97367;EPPR=3.03649;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9879;NS=92;NUMALT=1;ODDS=8.00238;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1028;QR=75653;RO=2073;RPP=63.8115;RPPR=4504.47;RUN=1;SAF=10;SAP=7.97367;SAR=18;SRF=1039;SRP=3.03649;SRR=1034;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:71.6485:15:15:509:0:0:0,-4.51545,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:99:42:42:1566:0:0:0,-10,-10 0/0:71.6485:15:15:542:0:0:0,-4.51545,-10 0/0:92.7193:22:22:800:0:0:0,-6.62266,-10 0/0:56.5971:10:10:372:0:0:0,-3.0103,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:99:27:27:966:0:0:0,-8.12781,-10 0/0:92.7193:22:22:801:0:0:0,-6.62266,-10 0/0:50.5765:8:8:281:0:0:0,-2.40824,-10 0/0:50.5765:8:8:274:0:0:0,-2.40824,-10 0/0:59.6074:11:11:414:0:0:0,-3.31133,-10 0/0:99:40:40:1448:0:0:0,-10,-10 0/0:99:54:54:2012:0:0:0,-10,-10 0/0:99:33:33:1186:0:0:0,-9.93399,-10 0/0:80.6738:36:35:1285:1:38:0,-5.48078,-10 0/0:99:31:31:1125:0:0:0,-9.33193,-10 0/0:53.5868:9:9:338:0:0:0,-2.70927,-10 0/0:86.6997:20:20:739:0:0:0,-6.0206,-10 0/0:99:33:33:1227:0:0:0,-9.93399,-10 0/0:98.7359:24:24:783:0:0:0,-7.22472,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:62.6177:12:12:454:0:0:0,-3.61236,-10 0/0:99:26:26:940:0:0:0,-7.82678,-10 0/0:92.7193:22:22:795:0:0:0,-6.62266,-10 0/0:99:27:27:957:0:0:0,-8.12781,-10 0/0:95.7283:23:23:840:0:0:0,-6.92369,-10 0/0:59.6074:11:11:396:0:0:0,-3.31133,-10 0/0:83.6896:19:19:703:0:0:0,-5.71957,-10 0/0:99:40:40:1489:0:0:0,-10,-10 0/0:50.5765:8:8:253:0:0:0,-2.40824,-10 0/0:44.5559:6:6:224:0:0:0,-1.80618,-10 0/0:86.6997:20:20:744:0:0:0,-6.0206,-10 0/0:68.6383:14:14:525:0:0:0,-4.21442,-10 0/0:83.6896:19:19:693:0:0:0,-5.71957,-10 0/0:59.6074:11:11:388:0:0:0,-3.31133,-10 0/0:71.6485:15:15:548:0:0:0,-4.51545,-10 0/0:99:32:32:1199:0:0:0,-9.63296,-10 0/0:86.6997:20:20:725:0:0:0,-6.0206,-10 0/0:47.5662:7:7:263:0:0:0,-2.10721,-10 0/0:99:27:26:962:0:0:0,-7.82678,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:89.7097:21:21:744:0:0:0,-6.32163,-10 0/0:99:35:35:1307:0:0:0,-10,-10 0/0:95.7283:23:23:842:0:0:0,-6.92369,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/0:99:42:42:1558:0:0:0,-10,-10 0/0:72.5093:30:29:1036:1:34:0,-4.15378,-10 0/0:77.6692:17:17:608:0:0:0,-5.11751,-10 0/0:99:37:37:1381:0:0:0,-10,-10 0/0:68.6383:14:14:501:0:0:0,-4.21442,-10 0/0:99:32:32:1172:0:0:0,-9.63296,-10 0/0:86.6997:20:20:735:0:0:0,-6.0206,-10 0/0:50.5765:8:8:287:0:0:0,-2.40824,-10 0/0:99:51:51:1865:0:0:0,-10,-10 0/0:62.6177:12:12:455:0:0:0,-3.61236,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:89.7097:21:21:772:0:0:0,-6.32163,-10 0/0:86.6997:20:20:738:0:0:0,-6.0206,-10 0/0:53.5868:9:9:314:0:0:0,-2.70927,-10 0/0:99:36:36:1330:0:0:0,-10,-10 0/0:80.6795:18:18:674:0:0:0,-5.41854,-10 0/0:99:31:31:1098:0:0:0,-9.33193,-10 0/0:99:30:30:1079:0:0:0,-9.0309,-10 0/0:62.6177:12:12:442:0:0:0,-3.61236,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:92.7193:22:22:787:0:0:0,-6.62266,-10 0/0:53.5868:9:9:339:0:0:0,-2.70927,-10 0/0:99:27:27:964:0:0:0,-8.12781,-10 0/0:71.6485:15:15:543:0:0:0,-4.51545,-10 0/1:0.00145301:14:0:0:14:527:-10,-4.21442,0 0/0:99:33:33:1207:0:0:0,-9.93399,-10 0/1:99:22:10:366:12:429:-10,0,-10 0/0:95.7283:23:23:849:0:0:0,-6.92369,-10 0/0:99:30:30:1047:0:0:0,-9.0309,-10 0/0:68.6383:14:14:522:0:0:0,-4.21442,-10 0/0:99:25:25:904:0:0:0,-7.52575,-10 0/0:68.6383:14:14:518:0:0:0,-4.21442,-10 0/0:50.5765:8:8:303:0:0:0,-2.40824,-10 0/0:65.628:13:13:485:0:0:0,-3.91339,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 0/0:99:37:37:1381:0:0:0,-10,-10 0/0:99:29:28:1053:0:0:0,-8.42884,-10 0/0:98.7359:24:24:870:0:0:0,-7.22472,-10 0/0:98.7359:24:24:853:0:0:0,-7.22472,-10 0/0:59.6074:11:11:373:0:0:0,-3.31133,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:50.5765:8:8:292:0:0:0,-2.40824,-10 0/0:65.628:13:13:477:0:0:0,-3.91339,-10 0/0:99:31:31:1104:0:0:0,-9.33193,-10 0/0:99:27:27:1023:0:0:0,-8.12781,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 scaffold_101 23530 . A G 1918.91 . AB=0.764706;ABP=23.7032;AC=10;AF=0.0543478;AN=184;AO=77;CIGAR=1X;DP=1129;DPB=1129;DPRA=0.988643;EPP=3.26411;EPPR=3.67908;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.999;NS=92;NUMALT=1;ODDS=0.3859;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2799;QR=38901;RO=1052;RPP=170.214;RPPR=2270.06;RUN=1;SAF=37;SAP=3.26411;SAR=40;SRF=519;SRP=3.41487;SRR=533;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:17.297:17:0:0:17:600:-10,-5.11751,0 0/1:0.000796777:4:0:0:4:152:-10,-1.20412,0 0/0:48.6162:14:14:522:0:0:0,-4.21442,-10 0/0:30.5544:8:8:299:0:0:0,-2.40824,-10 0/0:51.6265:15:15:547:0:0:0,-4.51545,-10 0/0:21.5235:5:5:186:0:0:0,-1.50515,-10 0/0:69.6883:21:21:781:0:0:0,-6.32163,-10 0/0:72.6986:22:22:833:0:0:0,-6.62266,-10 0/0:21.5235:5:5:190:0:0:0,-1.50515,-10 0/0:15.5029:3:3:114:0:0:0,-0.90309,-10 0/0:36.575:10:10:334:0:0:0,-3.0103,-10 0/0:12.4926:2:2:76:0:0:0,-0.60206,-7.22 0/0:48.6162:14:14:525:0:0:0,-4.21442,-10 0/0:45.6059:13:13:445:0:0:0,-3.91339,-10 0/0:48.6162:14:14:525:0:0:0,-4.21442,-10 0/0:63.6677:19:19:711:0:0:0,-5.71957,-10 0/0:57.6471:17:17:646:0:0:0,-5.11751,-10 0/0:21.5235:5:5:190:0:0:0,-1.50515,-10 0/0:36.575:10:10:356:0:0:0,-3.0103,-10 0/0:87.7499:27:27:1018:0:0:0,-8.12781,-10 0/0:54.6368:16:16:580:0:0:0,-4.81648,-10 0/0:69.6883:21:21:771:0:0:0,-6.32163,-10 0/0:33.5647:9:9:340:0:0:0,-2.70927,-10 0/0:57.6471:17:17:646:0:0:0,-5.11751,-10 0/0:30.5544:8:8:304:0:0:0,-2.40824,-10 0/0:48.6162:14:14:532:0:0:0,-4.21442,-10 0/0:54.6368:16:16:585:0:0:0,-4.81648,-10 0/0:27.5441:7:7:259:0:0:0,-2.10721,-10 0/0:33.5647:9:9:314:0:0:0,-2.70927,-10 0/0:54.6368:16:16:591:0:0:0,-4.81648,-10 0/0:24.5338:6:6:223:0:0:0,-1.80618,-10 0/0:18.5132:4:4:148:0:0:0,-1.20412,-10 0/0:33.5647:9:9:286:0:0:0,-2.70927,-10 0/0:27.5441:7:7:262:0:0:0,-2.10721,-10 0/0:54.6368:16:16:603:0:0:0,-4.81648,-10 0/0:12.4926:2:2:76:0:0:0,-0.60206,-7.22 0/0:30.5544:8:8:297:0:0:0,-2.40824,-10 0/0:66.678:20:20:727:0:0:0,-6.0206,-10 0/0:36.575:10:10:378:0:0:0,-3.0103,-10 0/0:39.5853:11:11:417:0:0:0,-3.31133,-10 0/0:54.6368:16:16:608:0:0:0,-4.81648,-10 0/0:27.5441:7:7:266:0:0:0,-2.10721,-10 0/0:36.575:10:10:378:0:0:0,-3.0103,-10 0/0:54.6368:16:16:575:0:0:0,-4.81648,-10 0/0:33.5647:9:9:338:0:0:0,-2.70927,-10 0/0:30.5544:8:8:304:0:0:0,-2.40824,-10 0/0:78.7192:24:24:875:0:0:0,-7.22472,-10 0/0:45.6059:13:13:450:0:0:0,-3.91339,-10 0/0:39.5853:11:11:415:0:0:0,-3.31133,-10 0/0:81.7295:25:25:915:0:0:0,-7.52575,-10 0/0:39.5853:11:11:417:0:0:0,-3.31133,-10 0/0:57.6471:17:17:605:0:0:0,-5.11751,-10 0/0:51.6265:15:15:562:0:0:0,-4.51545,-10 0/0:18.5132:4:4:151:0:0:0,-1.20412,-10 0/0:69.6883:21:21:745:0:0:0,-6.32163,-10 0/0:42.5956:12:12:455:0:0:0,-3.61236,-10 0/0:48.6162:14:14:513:0:0:0,-4.21442,-10 0/0:36.575:10:10:347:0:0:0,-3.0103,-10 0/0:45.6059:13:13:494:0:0:0,-3.91339,-10 0/0:21.5235:5:5:190:0:0:0,-1.50515,-10 0/0:63.6677:19:19:711:0:0:0,-5.71957,-10 0/0:66.678:20:20:737:0:0:0,-6.0206,-10 0/0:72.6986:22:22:830:0:0:0,-6.62266,-10 0/0:39.5853:11:11:414:0:0:0,-3.31133,-10 0/0:30.5544:8:8:302:0:0:0,-2.40824,-10 0/0:45.6059:13:13:490:0:0:0,-3.91339,-10 0/0:57.6471:17:17:609:0:0:0,-5.11751,-10 0/0:21.5235:5:5:190:0:0:0,-1.50515,-10 0/0:60.6574:18:18:676:0:0:0,-5.41854,-10 0/0:21.5235:5:5:168:0:0:0,-1.50515,-10 0/0:45.6059:13:13:486:0:0:0,-3.91339,-10 0/0:42.5956:12:12:434:0:0:0,-3.61236,-10 0/0:45.6059:13:13:481:0:0:0,-3.91339,-10 0/0:33.5647:9:9:332:0:0:0,-2.70927,-10 0/0:45.6059:13:13:490:0:0:0,-3.91339,-10 0/0:24.5338:6:6:228:0:0:0,-1.80618,-10 1/1:5.25584:13:0:0:13:465:-10,-3.91339,0 0/0:33.5647:9:9:341:0:0:0,-2.70927,-10 0/0:24.5338:6:6:228:0:0:0,-1.80618,-10 0/0:24.5338:6:6:204:0:0:0,-1.80618,-10 0/0:69.6883:21:21:795:0:0:0,-6.32163,-10 0/1:94.2636:13:2:75:11:412:-10,0,-5.1037 0/0:57.6471:17:17:612:0:0:0,-5.11751,-10 0/1:99:9:2:76:7:244:-10,0,-6.06703 0/0:69.6883:21:21:794:0:0:0,-6.32163,-10 0/0:27.5441:7:7:266:0:0:0,-2.10721,-10 0/0:42.5956:12:12:449:0:0:0,-3.61236,-10 0/0:27.5441:7:7:243:0:0:0,-2.10721,-10 0/1:99:8:4:151:4:152:-10,0,-10 0/0:42.5956:12:12:454:0:0:0,-3.61236,-10 1/1:29.3382:21:0:0:21:774:-10,-6.32163,0 0/0:39.5853:11:11:395:0:0:0,-3.31133,-10 scaffold_101 296126 . A G 2147.8 . AB=0.594595;ABP=8.76177;AC=8;AF=0.0434783;AN=184;AO=84;CIGAR=1X;DP=1524;DPB=1524;DPRA=1.00679;EPP=6.73282;EPPR=5.93378;GTI=4;LEN=1;MEANALT=1;MQM=60;MQMR=59.9826;NS=92;NUMALT=1;ODDS=1.40933;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3086;QR=52005;RO=1438;RPP=185.414;RPPR=3125.59;RUN=1;SAF=36;SAP=6.73282;SAR=48;SRF=697;SRP=5.93378;SRR=741;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.8662:15:15:520:0:0:0,-4.51545,-10 0/0:29.7838:7:7:248:0:0:0,-2.10721,-10 0/0:53.8662:15:15:517:0:0:0,-4.51545,-10 0/0:41.825:11:11:410:0:0:0,-3.31133,-10 0/0:47.8456:13:13:467:0:0:0,-3.91339,-10 0/0:53.8662:15:15:540:0:0:0,-4.51545,-10 1/1:75.7126:38:0:0:38:1417:-10,-10,0 0/0:74.9383:22:22:763:0:0:0,-6.62266,-10 0/0:41.825:11:11:407:0:0:0,-3.31133,-10 0/0:11.7218:1:1:15:0:0:0,-0.30103,-1.5 0/0:26.7735:6:6:227:0:0:0,-1.80618,-10 0/0:26.7735:6:6:216:0:0:0,-1.80618,-10 0/0:89.9894:28:27:972:0:0:0,-8.12781,-10 0/0:92.9994:28:28:956:0:0:0,-8.42884,-10 0/0:89.9894:27:27:982:0:0:0,-8.12781,-10 0/0:86.9793:26:26:946:0:0:0,-7.82678,-10 0/1:99:14:10:352:4:145:-10,0,-10 0/0:35.8044:9:9:339:0:0:0,-2.70927,-10 0/0:38.8147:10:10:371:0:0:0,-3.0103,-10 0/0:99:37:37:1346:0:0:0,-10,-10 0/0:56.8765:16:16:579:0:0:0,-4.81648,-10 0/0:77.9486:23:23:820:0:0:0,-6.92369,-10 0/0:23.7632:5:5:161:0:0:0,-1.50515,-10 0/0:50.8559:14:14:503:0:0:0,-4.21442,-10 0/0:41.825:11:11:414:0:0:0,-3.31133,-10 0/0:83.9691:25:25:917:0:0:0,-7.52575,-10 0/0:68.9177:20:20:738:0:0:0,-6.0206,-10 0/0:41.825:11:11:417:0:0:0,-3.31133,-10 0/0:0.312497:16:15:537:1:38:-0.18764,0,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:26.7735:6:6:228:0:0:0,-1.80618,-10 0/0:29.7838:7:7:242:0:0:0,-2.10721,-10 0/0:50.8559:14:14:520:0:0:0,-4.21442,-10 0/0:47.8456:13:13:480:0:0:0,-3.91339,-10 0/0:71.928:21:21:763:0:0:0,-6.32163,-10 0/0:29.7838:7:7:261:0:0:0,-2.10721,-10 0/0:68.9177:20:20:731:0:0:0,-6.0206,-10 0/0:80.9588:25:24:856:0:0:0,-7.22472,-10 0/0:38.8147:10:10:351:0:0:0,-3.0103,-10 0/0:53.8662:15:15:562:0:0:0,-4.51545,-10 0/0:68.9177:20:20:754:0:0:0,-6.0206,-10 0/0:68.9177:20:20:720:0:0:0,-6.0206,-10 0/0:41.825:11:11:390:0:0:0,-3.31133,-10 0/0:56.8765:16:16:526:0:0:0,-4.81648,-10 0/0:99:31:31:1147:0:0:0,-9.33193,-10 0/0:56.8765:16:16:594:0:0:0,-4.81648,-10 0/0:99:43:43:1609:0:0:0,-10,-10 0/0:62.8971:18:18:673:0:0:0,-5.41854,-10 0/0:32.7941:8:8:255:0:0:0,-2.40824,-10 0/0:99:33:33:1181:0:0:0,-9.93399,-10 0/0:26.7735:6:6:228:0:0:0,-1.80618,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:47.8456:13:13:475:0:0:0,-3.91339,-10 0/0:20.7529:4:4:151:0:0:0,-1.20412,-10 0/0:47.7647:22:21:744:1:16:0,-3.68024,-10 0/0:56.8765:16:16:579:0:0:0,-4.81648,-10 0/0:65.9074:19:19:694:0:0:0,-5.71957,-10 0/0:47.8456:13:13:487:0:0:0,-3.91339,-10 0/0:74.9383:22:22:808:0:0:0,-6.62266,-10 0/0:44.8353:12:12:405:0:0:0,-3.61236,-10 0/0:68.9177:20:20:728:0:0:0,-6.0206,-10 0/0:35.8044:9:9:330:0:0:0,-2.70927,-10 0/0:99:38:38:1370:0:0:0,-10,-10 0/0:65.9074:19:19:667:0:0:0,-5.71957,-10 0/0:35.8044:9:9:323:0:0:0,-2.70927,-10 0/0:68.9177:20:20:692:0:0:0,-6.0206,-10 0/0:53.8662:15:15:544:0:0:0,-4.51545,-10 0/1:0.291515:7:0:0:7:244:-10,-2.10721,0 0/1:99:22:11:380:11:402:-10,0,-10 0/1:0.143312:6:0:0:6:223:-10,-1.80618,0 0/0:38.8147:10:10:380:0:0:0,-3.0103,-10 0/0:86.9793:26:26:947:0:0:0,-7.82678,-10 0/0:71.928:21:21:792:0:0:0,-6.32163,-10 0/0:47.8456:13:13:458:0:0:0,-3.91339,-10 0/0:83.9691:25:25:920:0:0:0,-7.52575,-10 0/1:0.604014:8:0:0:8:300:-10,-2.40824,0 0/0:38.8147:10:10:349:0:0:0,-3.0103,-10 0/0:56.8765:16:16:593:0:0:0,-4.81648,-10 0/0:20.7529:4:4:152:0:0:0,-1.20412,-10 0/0:35.8044:9:9:336:0:0:0,-2.70927,-10 0/0:96.005:29:29:1073:0:0:0,-8.72987,-10 0/0:99:30:30:1045:0:0:0,-9.0309,-10 0/0:59.8868:17:17:611:0:0:0,-5.11751,-10 0/0:56.8765:16:16:574:0:0:0,-4.81648,-10 0/1:99:17:9:338:8:301:-10,0,-10 0/0:11.722:1:1:38:0:0:0,-0.30103,-3.8 0/0:56.8765:16:16:565:0:0:0,-4.81648,-10 0/0:50.8559:14:14:512:0:0:0,-4.21442,-10 0/0:26.7735:6:6:219:0:0:0,-1.80618,-10 0/0:59.8868:17:17:602:0:0:0,-5.11751,-10 0/0:53.8662:15:15:516:0:0:0,-4.51545,-10 0/0:44.8353:12:12:445:0:0:0,-3.61236,-10 scaffold_101 706755 . G A 5451.2 . AB=0.494662;ABP=3.07985;AC=12;AF=0.0652174;AN=184;AO=200;CIGAR=1X;DP=2357;DPB=2357;DPRA=1.47358;EPP=3.70517;EPPR=7.01335;GTI=1;LEN=1;MEANALT=1;MQM=59.94;MQMR=59.981;NS=92;NUMALT=1;ODDS=0.378902;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7239;QR=76760;RO=2153;RPP=437.305;RPPR=4574.54;RUN=1;SAF=96;SAP=3.70517;SAR=104;SRF=1037;SRP=9.30485;SRR=1116;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:36.2128:10:10:313:0:0:0,-3.0103,-10 0/0:75.3467:23:23:812:0:0:0,-6.92369,-10 0/0:75.3467:23:23:859:0:0:0,-6.92369,-10 0/0:51.2643:15:15:508:0:0:0,-4.51545,-10 0/0:81.3671:25:25:894:0:0:0,-7.52575,-10 0/0:57.2849:17:17:634:0:0:0,-5.11751,-10 1/1:99:46:0:0:46:1707:-10,-10,0 0/0:75.3467:23:23:805:0:0:0,-6.92369,-10 0/0:60.2952:18:18:651:0:0:0,-5.41854,-10 0/0:18.151:4:4:152:0:0:0,-1.20412,-10 0/0:27.1819:7:7:265:0:0:0,-2.10721,-10 0/0:36.2128:10:10:357:0:0:0,-3.0103,-10 0/0:99:48:47:1605:0:0:0,-10,-10 0/0:99:46:45:1616:1:16:0,-10,-10 0/0:99:35:35:1220:0:0:0,-10,-10 0/1:99:36:20:722:16:584:-10,0,-10 0/1:99:43:21:713:22:807:-10,0,-10 0/0:39.2231:11:11:367:0:0:0,-3.31133,-10 0/0:54.2746:16:16:577:0:0:0,-4.81648,-10 0/0:99:52:51:1828:1:16:0,-10,-10 0/0:69.3261:21:21:771:0:0:0,-6.32163,-10 0/0:99:46:46:1641:0:0:0,-10,-10 0/0:57.2849:17:17:624:0:0:0,-5.11751,-10 0/0:81.3671:25:25:936:0:0:0,-7.52575,-10 0/0:69.3261:21:21:781:0:0:0,-6.32163,-10 0/0:99:40:40:1487:0:0:0,-10,-10 0/0:90.3981:28:28:997:0:0:0,-8.42884,-10 0/0:57.2849:17:17:581:0:0:0,-5.11751,-10 0/0:78.3569:24:24:860:0:0:0,-7.22472,-10 0/1:99:41:18:671:23:827:-10,0,-10 0/0:27.1819:7:7:246:0:0:0,-2.10721,-10 0/0:48.254:14:14:477:0:0:0,-4.21442,-10 0/0:49.7618:23:22:750:1:16:0,-3.96196,-10 0/0:48.254:14:14:507:0:0:0,-4.21442,-10 0/0:96.4141:30:30:1092:0:0:0,-9.0309,-10 0/0:21.1613:5:5:185:0:0:0,-1.50515,-10 0/0:51.2643:15:15:558:0:0:0,-4.51545,-10 0/0:99:41:41:1393:0:0:0,-10,-10 0/0:78.3569:24:24:833:0:0:0,-7.22472,-10 0/0:57.2849:17:17:621:0:0:0,-5.11751,-10 0/0:99:48:48:1674:0:0:0,-10,-10 0/0:66.3158:20:20:728:0:0:0,-6.0206,-10 0/0:72.3363:22:22:813:0:0:0,-6.62266,-10 0/0:99:47:47:1643:0:0:0,-10,-10 0/0:66.3158:20:20:726:0:0:0,-6.0206,-10 0/1:99:16:10:334:6:224:-10,0,-10 0/1:99:42:28:1048:14:524:-10,0,-10 0/0:99:37:37:1360:0:0:0,-10,-10 0/0:69.3261:21:21:744:0:0:0,-6.32163,-10 0/1:99:39:17:586:22:801:-10,0,-10 1/1:28.6512:12:0:0:12:424:-10,-3.61236,0 0/0:99:47:47:1692:0:0:0,-10,-10 0/0:87.3878:27:27:1001:0:0:0,-8.12781,-10 0/1:2.16814:8:0:0:8:296:-10,-2.40824,0 0/1:99:56:28:1012:28:997:-10,0,-10 0/0:63.3055:19:19:677:0:0:0,-5.71957,-10 0/0:78.3569:24:24:886:0:0:0,-7.22472,-10 0/0:48.254:14:14:494:0:0:0,-4.21442,-10 0/0:45.2437:13:13:479:0:0:0,-3.91339,-10 0/0:51.2643:16:15:506:0:0:0,-4.51545,-10 0/0:99:47:47:1704:0:0:0,-10,-10 0/0:69.3261:21:21:770:0:0:0,-6.32163,-10 0/0:93.4061:29:29:1016:0:0:0,-8.72987,-10 0/0:90.3981:28:28:1034:0:0:0,-8.42884,-10 0/0:45.2437:13:13:470:0:0:0,-3.91339,-10 0/0:99:46:46:1642:0:0:0,-10,-10 0/0:69.3261:21:21:766:0:0:0,-6.32163,-10 0/0:39.2231:11:11:382:0:0:0,-3.31133,-10 0/0:99:46:46:1628:0:0:0,-10,-10 0/0:42.2334:12:12:427:0:0:0,-3.61236,-10 0/0:99:33:33:1183:0:0:0,-9.93399,-10 0/0:99:39:39:1406:0:0:0,-10,-10 0/0:93.4061:29:29:1018:0:0:0,-8.72987,-10 0/0:81.3671:25:25:910:0:0:0,-7.52575,-10 0/0:99:50:50:1765:0:0:0,-10,-10 0/0:48.254:14:14:486:0:0:0,-4.21442,-10 0/0:84.3773:26:26:893:0:0:0,-7.82678,-10 0/0:54.2746:16:16:586:0:0:0,-4.81648,-10 0/0:27.1819:7:7:230:0:0:0,-2.10721,-10 0/0:63.3055:19:19:683:0:0:0,-5.71957,-10 0/0:99:39:38:1414:0:0:0,-10,-10 0/0:99:35:35:1175:0:0:0,-10,-10 0/0:99:35:35:1230:0:0:0,-10,-10 0/0:63.3055:19:19:650:0:0:0,-5.71957,-10 0/0:93.4061:29:29:1060:0:0:0,-8.72987,-10 0/0:48.254:14:14:469:0:0:0,-4.21442,-10 0/0:90.3981:28:28:979:0:0:0,-8.42884,-10 0/0:63.3055:19:19:651:0:0:0,-5.71957,-10 0/0:27.1819:7:7:248:0:0:0,-2.10721,-10 0/0:90.3981:29:28:994:0:0:0,-8.42884,-10 0/0:87.3878:27:27:956:0:0:0,-8.12781,-10 0/0:60.2952:18:18:623:0:0:0,-5.41854,-10 scaffold_101 864509 . C A 6468.83 . AB=0.482972;ABP=3.82376;AC=24;AF=0.130435;AN=184;AO=238;CIGAR=1X;DP=1657;DPB=1657;DPRA=1.30522;EPP=11.2218;EPPR=6.3907;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9746;NS=92;NUMALT=1;ODDS=0.639668;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8696;QR=51865;RO=1419;RPP=494.092;RPPR=2946.92;RUN=1;SAF=101;SAP=14.8348;SAR=137;SRF=717;SRP=3.35461;SRR=702;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:14.4442:15:14:522:1:28:0,-0.539359,-10 0/0:31.2568:8:8:294:0:0:0,-2.40824,-10 0/0:76.4113:23:23:867:0:0:0,-6.92369,-10 0/0:43.298:12:12:452:0:0:0,-3.61236,-10 0/0:34.2671:9:9:342:0:0:0,-2.70927,-10 0/0:40.2877:11:11:402:0:0:0,-3.31133,-10 0/0:88.4523:27:27:983:0:0:0,-8.12781,-10 0/0:61.3598:18:18:635:0:0:0,-5.41854,-10 0/0:49.3186:14:14:521:0:0:0,-4.21442,-10 0/0:25.2362:6:6:194:0:0:0,-1.80618,-10 0/0:25.2362:6:6:228:0:0:0,-1.80618,-10 0/0:22.2259:5:5:187:0:0:0,-1.50515,-10 0/0:99:34:34:1269:0:0:0,-10,-10 0/0:99:38:38:1404:0:0:0,-10,-10 0/0:73.401:22:22:810:0:0:0,-6.62266,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/0:91.4624:28:28:1031:0:0:0,-8.42884,-10 0/0:28.2465:7:7:243:0:0:0,-2.10721,-10 0/0:79.4216:24:24:888:0:0:0,-7.22472,-10 0/1:99:43:20:719:23:815:-10,0,-10 0/1:99:19:13:458:6:228:-10,0,-10 0/0:76.4113:23:23:867:0:0:0,-6.92369,-10 1/1:12.0927:10:0:0:10:380:-10,-3.0103,0 0/1:99:27:17:624:10:355:-10,0,-10 0/0:58.3495:17:17:592:0:0:0,-5.11751,-10 0/1:99:31:15:569:16:606:-10,0,-10 0/0:43.298:12:12:429:0:0:0,-3.61236,-10 0/0:37.2774:10:10:337:0:0:0,-3.0103,-10 0/0:29.1742:16:15:545:1:16:0,-2.01236,-10 0/0:91.4624:28:28:1023:0:0:0,-8.42884,-10 0/0:22.2259:5:5:187:0:0:0,-1.50515,-10 0/0:43.298:12:12:433:0:0:0,-3.61236,-10 0/0:46.3083:13:13:462:0:0:0,-3.91339,-10 0/0:37.2774:10:10:365:0:0:0,-3.0103,-10 0/0:55.3392:16:16:599:0:0:0,-4.81648,-10 0/0:25.2362:6:6:228:0:0:0,-1.80618,-10 1/1:6.07208:8:0:0:8:304:-10,-2.40824,0 0/0:73.401:22:22:820:0:0:0,-6.62266,-10 0/0:61.3598:18:18:682:0:0:0,-5.41854,-10 0/1:99:16:6:228:10:358:-10,0,-10 0/1:99:23:13:487:10:379:-10,0,-10 0/0:85.4421:26:26:947:0:0:0,-7.82678,-10 0/0:55.3392:16:16:598:0:0:0,-4.81648,-10 0/0:79.4216:24:24:861:0:0:0,-7.22472,-10 0/1:99:23:16:597:7:252:-10,0,-10 0/1:99:10:5:190:5:189:-10,0,-10 0/1:99:41:19:683:22:797:-10,0,-10 1/1:45.206:21:0:0:21:746:-10,-6.32163,0 1/1:24.1339:14:0:0:14:531:-10,-4.21442,0 0/0:97.4765:30:30:1070:0:0:0,-9.0309,-10 0/0:31.2568:8:8:304:0:0:0,-2.40824,-10 0/1:99:36:21:780:15:563:-10,0,-10 0/0:40.2877:11:11:384:0:0:0,-3.31133,-10 0/0:28.2465:7:7:258:0:0:0,-2.10721,-10 0/1:99:40:21:762:19:679:-10,0,-10 0/0:58.3495:17:17:645:0:0:0,-5.11751,-10 0/1:50.5499:14:1:36:13:482:-10,0,-0.531708 0/0:19.2156:4:4:152:0:0:0,-1.20412,-10 0/0:64.3701:19:19:656:0:0:0,-5.71957,-10 0/0:40.2877:11:11:407:0:0:0,-3.31133,-10 0/0:88.4523:27:27:986:0:0:0,-8.12781,-10 0/0:67.3804:20:20:748:0:0:0,-6.0206,-10 0/0:66.6509:33:32:1135:1:29:0,-5.51548,-10 0/0:49.3186:14:14:487:0:0:0,-4.21442,-10 0/0:25.2362:6:6:228:0:0:0,-1.80618,-10 0/0:99:36:36:1350:0:0:0,-10,-10 0/0:55.3392:16:16:567:0:0:0,-4.81648,-10 0/0:70.3907:21:21:784:0:0:0,-6.32163,-10 0/0:99:33:33:1238:0:0:0,-9.93399,-10 0/0:49.3186:14:14:527:0:0:0,-4.21442,-10 0/0:73.401:22:22:824:0:0:0,-6.62266,-10 0/0:85.4421:26:26:938:0:0:0,-7.82678,-10 0/0:73.401:22:22:810:0:0:0,-6.62266,-10 0/0:58.3495:17:17:641:0:0:0,-5.11751,-10 0/0:85.4421:26:26:933:0:0:0,-7.82678,-10 0/0:55.3392:16:16:537:0:0:0,-4.81648,-10 0/0:40.2877:11:11:370:0:0:0,-3.31133,-10 0/0:34.3667:17:16:547:1:16:0,-2.28706,-10 0/0:25.2362:6:6:222:0:0:0,-1.80618,-10 0/0:25.2362:6:6:226:0:0:0,-1.80618,-10 0/0:82.4318:25:25:934:0:0:0,-7.52575,-10 0/0:64.3701:19:19:704:0:0:0,-5.71957,-10 0/0:58.3495:17:17:641:0:0:0,-5.11751,-10 0/0:67.3804:20:20:757:0:0:0,-6.0206,-10 0/0:55.3392:16:16:569:0:0:0,-4.81648,-10 0/0:10.1847:1:1:38:0:0:0,-0.30103,-3.8 1/1:15.103:11:0:0:11:418:-10,-3.31133,0 1/1:24.1339:14:0:0:14:525:-10,-4.21442,0 0/0:25.2362:6:6:205:0:0:0,-1.80618,-10 0/0:55.3392:16:16:557:0:0:0,-4.81648,-10 0/0:46.3083:13:13:456:0:0:0,-3.91339,-10 0/0:46.3083:13:13:450:0:0:0,-3.91339,-10 scaffold_101 931629 . A G 1805.31 . AB=0.657658;ABP=26.9747;AC=9;AF=0.048913;AN=184;AO=73;CIGAR=1X;DP=1198;DPB=1198;DPRA=0.941736;EPP=3.75395;EPPR=3.01803;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=3.21878;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2636;QR=41463;RO=1124;RPP=161.528;RPPR=2391.91;RUN=1;SAF=39;SAP=3.75395;SAR=34;SRF=555;SRP=3.38896;SRR=569;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:38.5752:9:9:334:0:0:0,-2.70927,-10 0/0:50.6164:13:13:477:0:0:0,-3.91339,-10 0/1:99:10:3:110:7:242:-10,0,-9.33555 0/0:20.5134:3:3:114:0:0:0,-0.90309,-10 0/0:53.6267:14:14:529:0:0:0,-4.21442,-10 0/0:26.534:5:5:190:0:0:0,-1.50515,-10 0/0:95.7685:28:28:1051:0:0:0,-8.42884,-10 0/0:38.5752:9:9:342:0:0:0,-2.70927,-10 0/0:38.5752:9:9:316:0:0:0,-2.70927,-10 0/0:20.5134:3:3:114:0:0:0,-0.90309,-10 0/0:23.5237:4:4:152:0:0:0,-1.20412,-10 0/0:17.5031:2:2:76:0:0:0,-0.60206,-7.22 0/0:86.7399:25:25:920:0:0:0,-7.52575,-10 0/0:77.7091:22:22:833:0:0:0,-6.62266,-10 0/0:62.6576:17:17:637:0:0:0,-5.11751,-10 0/0:80.7194:23:23:814:0:0:0,-6.92369,-10 0/0:47.6061:12:12:453:0:0:0,-3.61236,-10 0/0:35.5649:8:8:300:0:0:0,-2.40824,-10 0/0:44.5958:11:11:405:0:0:0,-3.31133,-10 0/0:77.7091:22:22:817:0:0:0,-6.62266,-10 0/1:99:12:6:224:6:228:-10,0,-10 0/0:74.6988:21:21:788:0:0:0,-6.32163,-10 0/0:44.5958:11:11:409:0:0:0,-3.31133,-10 0/0:44.5958:11:11:407:0:0:0,-3.31133,-10 0/0:44.5958:11:11:411:0:0:0,-3.31133,-10 0/0:68.6782:19:19:688:0:0:0,-5.71957,-10 0/0:62.6576:17:17:643:0:0:0,-5.11751,-10 0/0:38.5752:9:9:303:0:0:0,-2.70927,-10 0/0:53.6267:14:14:528:0:0:0,-4.21442,-10 0/0:83.7296:24:24:839:0:0:0,-7.22472,-10 0/0:32.5546:7:7:262:0:0:0,-2.10721,-10 0/0:35.5649:8:8:304:0:0:0,-2.40824,-10 0/0:44.5958:11:11:403:0:0:0,-3.31133,-10 0/0:29.5443:6:6:228:0:0:0,-1.80618,-10 0/1:0.0190464:8:0:0:8:288:-10,-2.40824,0 0/0:17.5031:2:2:76:0:0:0,-0.60206,-7.22 0/0:38.5752:9:9:336:0:0:0,-2.70927,-10 0/1:99:21:13:481:8:295:-10,0,-10 0/0:56.637:15:15:561:0:0:0,-4.51545,-10 0/1:99:11:5:188:6:201:-10,0,-10 0/0:47.6061:12:12:456:0:0:0,-3.61236,-10 0/1:45.6537:16:1:37:15:550:-10,0,-0.0876401 0/1:0.154762:11:0:0:11:418:-10,-3.31133,0 0/0:77.7091:22:22:826:0:0:0,-6.62266,-10 0/0:38.5752:9:9:331:0:0:0,-2.70927,-10 0/0:47.6061:12:12:410:0:0:0,-3.61236,-10 0/0:98.7802:29:29:1061:0:0:0,-8.72987,-10 0/0:65.6679:18:18:648:0:0:0,-5.41854,-10 0/0:26.534:5:5:190:0:0:0,-1.50515,-10 0/0:92.7603:27:27:976:0:0:0,-8.12781,-10 0/0:56.637:15:15:550:0:0:0,-4.51545,-10 0/0:65.6679:18:18:651:0:0:0,-5.41854,-10 0/0:26.534:5:5:184:0:0:0,-1.50515,-10 0/0:26.534:5:5:188:0:0:0,-1.50515,-10 0/0:80.7194:23:23:851:0:0:0,-6.92369,-10 0/0:50.6164:13:13:490:0:0:0,-3.91339,-10 0/0:50.6164:13:13:493:0:0:0,-3.91339,-10 0/0:41.5855:10:10:354:0:0:0,-3.0103,-10 0/0:32.5546:7:7:253:0:0:0,-2.10721,-10 0/0:35.5649:8:8:304:0:0:0,-2.40824,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:44.5958:11:11:415:0:0:0,-3.31133,-10 0/0:89.7502:26:26:964:0:0:0,-7.82678,-10 0/0:53.6267:14:14:532:0:0:0,-4.21442,-10 0/0:35.5649:8:8:277:0:0:0,-2.40824,-10 0/0:47.6061:12:12:443:0:0:0,-3.61236,-10 0/0:65.6679:18:18:658:0:0:0,-5.41854,-10 0/0:38.5752:9:9:339:0:0:0,-2.70927,-10 0/0:62.6576:18:17:596:0:0:0,-5.11751,-10 0/0:20.5134:3:3:114:0:0:0,-0.90309,-10 0/0:65.6679:18:18:680:0:0:0,-5.41854,-10 0/0:77.7091:22:22:833:0:0:0,-6.62266,-10 0/0:47.6061:12:12:433:0:0:0,-3.61236,-10 0/0:44.5958:11:11:394:0:0:0,-3.31133,-10 0/0:65.6679:18:18:673:0:0:0,-5.41854,-10 0/0:38.5752:9:9:333:0:0:0,-2.70927,-10 0/0:35.5649:8:8:293:0:0:0,-2.40824,-10 0/0:29.5443:6:6:228:0:0:0,-1.80618,-10 0/0:26.534:5:5:190:0:0:0,-1.50515,-10 0/0:35.5649:8:8:299:0:0:0,-2.40824,-10 0/0:77.7091:22:22:762:0:0:0,-6.62266,-10 0/0:68.6782:19:19:711:0:0:0,-5.71957,-10 0/1:99:12:6:224:6:228:-10,0,-10 0/1:99:10:4:152:6:186:-10,0,-10 0/0:50.6164:13:13:451:0:0:0,-3.91339,-10 0/0:32.5546:7:7:262:0:0:0,-2.10721,-10 0/0:53.6267:14:14:521:0:0:0,-4.21442,-10 0/0:47.6061:12:12:445:0:0:0,-3.61236,-10 0/0:32.5546:7:7:262:0:0:0,-2.10721,-10 0/0:65.6679:18:18:653:0:0:0,-5.41854,-10 0/0:47.6061:12:12:456:0:0:0,-3.61236,-10 0/0:47.6061:12:12:448:0:0:0,-3.61236,-10 scaffold_101 1306639 . A G 59269.9 . AB=0.535211;ABP=3.7749;AC=182;AF=0.98913;AN=184;AO=1955;CIGAR=1X;DP=1989;DPB=1989;DPRA=0;EPP=3.19801;EPPR=3.60252;GTI=0;LEN=1;MEANALT=1.01087;MQM=59.9749;MQMR=60;NS=92;NUMALT=1;ODDS=4.69107;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=71552;QR=1204;RO=33;RPP=4033.87;RPPR=66.2462;RUN=1;SAF=996;SAP=4.53089;SAR=959;SRF=16;SRP=3.0761;SRR=17;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:47.5792:12:0:0:12:413:-10,-3.61236,0 1/1:53.5998:14:0:0:14:527:-10,-4.21442,0 1/1:92.7323:27:0:0:27:996:-10,-8.12781,0 1/1:50.5895:13:0:0:13:493:-10,-3.91339,0 1/1:50.5895:13:0:0:13:483:-10,-3.91339,0 1/1:56.6101:15:0:0:15:531:-10,-4.51545,0 1/1:99:54:0:0:54:2042:-10,-10,0 1/1:99:40:0:0:40:1470:-10,-10,0 1/1:47.5792:12:0:0:12:441:-10,-3.61236,0 1/1:20.4865:3:0:0:3:111:-10,-0.90309,0 1/1:32.5277:7:0:0:7:243:-10,-2.10721,0 1/1:47.5792:12:0:0:12:441:-10,-3.61236,0 0/1:99:35:15:537:20:689:-10,0,-10 0/1:99:36:18:667:18:683:-10,0,-10 1/1:99:36:0:0:36:1301:-10,-10,0 1/1:99:31:0:0:31:1159:-10,-9.33193,0 1/1:95.7449:28:0:0:28:1041:-10,-8.42884,0 1/1:38.5483:9:0:0:9:319:-10,-2.70927,0 1/1:77.6821:22:0:0:22:819:-10,-6.62266,0 1/1:99:45:0:0:45:1601:-10,-10,0 1/1:53.5998:14:0:0:14:496:-10,-4.21442,0 1/1:99:30:0:0:30:1097:-10,-9.0309,0 1/1:53.5998:14:0:0:14:517:-10,-4.21442,0 1/1:92.7323:27:0:0:27:1009:-10,-8.12781,0 1/1:74.6719:21:0:0:21:779:-10,-6.32163,0 1/1:99:33:0:0:33:1205:-10,-9.93399,0 1/1:95.7449:28:0:0:28:956:-10,-8.42884,0 1/1:35.538:8:0:0:8:302:-10,-2.40824,0 1/1:74.6719:21:0:0:21:761:-10,-6.32163,0 1/1:92.7323:27:0:0:27:978:-10,-8.12781,0 1/1:26.5071:5:0:0:5:190:-10,-1.50515,0 1/1:26.5071:5:0:0:5:181:-10,-1.50515,0 1/1:92.7323:27:0:0:27:964:-10,-8.12781,0 1/1:62.6307:17:0:0:17:613:-10,-5.11751,0 1/1:99:31:0:0:31:1144:-10,-9.33193,0 1/1:29.5174:6:0:0:6:227:-10,-1.80618,0 1/1:23.4968:4:0:0:4:152:-10,-1.20412,0 1/1:99:47:0:0:47:1733:-10,-10,0 1/1:62.6307:17:0:0:17:633:-10,-5.11751,0 1/1:65.641:18:0:0:18:682:-10,-5.41854,0 1/1:98.7561:29:0:0:29:1090:-10,-8.72987,0 1/1:99:31:0:0:31:1166:-10,-9.33193,0 1/1:47.5792:12:0:0:12:418:-10,-3.61236,0 1/1:99:34:0:0:34:1271:-10,-10,0 1/1:77.6821:22:0:0:22:797:-10,-6.62266,0 1/1:99:33:0:0:33:1209:-10,-9.93399,0 1/1:99:54:0:0:54:1994:-10,-10,0 1/1:92.7323:27:0:0:27:1012:-10,-8.12781,0 1/1:62.6307:17:0:0:17:622:-10,-5.11751,0 1/1:99:38:0:0:38:1401:-10,-10,0 1/1:50.5895:13:0:0:13:483:-10,-3.91339,0 1/1:99:31:0:0:31:1168:-10,-9.33193,0 1/1:59.6204:16:0:0:16:562:-10,-4.81648,0 1/1:35.538:8:0:0:8:300:-10,-2.40824,0 1/1:99:41:0:0:41:1486:-10,-10,0 1/1:50.5895:13:0:0:13:484:-10,-3.91339,0 1/1:65.641:18:0:0:18:626:-10,-5.41854,0 1/1:53.5998:14:0:0:14:491:-10,-4.21442,0 1/1:89.7227:26:0:0:26:920:-10,-7.82678,0 1/1:44.5689:11:0:0:11:408:-10,-3.31133,0 1/1:99:32:0:0:31:1141:-10,-9.33193,0 1/1:65.641:18:0:0:18:662:-10,-5.41854,0 1/1:99:41:0:0:41:1527:-10,-10,0 1/1:68.6513:19:0:0:19:719:-10,-5.71957,0 1/1:62.6307:17:0:0:17:643:-10,-5.11751,0 1/1:83.7026:24:0:0:24:826:-10,-7.22472,0 1/1:74.6719:21:0:0:21:765:-10,-6.32163,0 1/1:44.5689:11:0:0:11:413:-10,-3.31133,0 1/1:92.7323:27:0:0:27:1018:-10,-8.12781,0 1/1:59.6204:16:0:0:16:560:-10,-4.81648,0 1/1:83.7026:24:0:0:24:805:-10,-7.22472,0 1/1:68.6513:19:0:0:19:707:-10,-5.71957,0 1/1:80.6924:23:0:0:23:858:-10,-6.92369,0 1/1:38.5483:9:0:0:9:301:-10,-2.70927,0 1/1:99:30:0:0:30:1077:-10,-9.0309,0 1/1:44.5689:11:0:0:11:395:-10,-3.31133,0 1/1:77.6821:22:0:0:22:813:-10,-6.62266,0 1/1:65.641:18:0:0:18:681:-10,-5.41854,0 1/1:44.5689:11:0:0:11:414:-10,-3.31133,0 1/1:32.5277:7:0:0:7:242:-10,-2.10721,0 1/1:99:36:0:0:36:1295:-10,-10,0 1/1:99:30:0:0:30:1096:-10,-9.0309,0 1/1:59.6204:16:0:0:16:576:-10,-4.81648,0 1/1:77.6821:22:0:0:22:829:-10,-6.62266,0 1/1:80.6924:23:0:0:23:825:-10,-6.92369,0 1/1:23.4968:4:0:0:4:148:-10,-1.20412,0 1/1:41.5586:10:0:0:10:354:-10,-3.0103,0 1/1:50.5895:13:0:0:13:489:-10,-3.91339,0 1/1:59.6204:16:0:0:16:591:-10,-4.81648,0 1/1:77.6821:22:0:0:22:823:-10,-6.62266,0 1/1:99:32:0:0:32:1177:-10,-9.63296,0 1/1:50.5895:13:0:0:13:452:-10,-3.91339,0 scaffold_101 1306655 . T C 239.687 . AB=0.434783;ABP=3.86001;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=1989;DPB=1989;DPRA=1.0646;EPP=3.87889;EPPR=8.23434;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9813;NS=92;NUMALT=1;ODDS=11.8999;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=378;QR=72791;RO=1979;RPP=24.725;RPPR=4128.39;RUN=1;SAF=4;SAP=3.87889;SAR=6;SRF=1008;SRP=4.51245;SRR=971;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.7735:12:12:453:0:0:0,-3.61236,-10 0/0:84.7942:14:14:532:0:0:0,-4.21442,-10 0/0:99:27:27:1017:0:0:0,-8.12781,-10 0/0:81.7838:13:13:461:0:0:0,-3.91339,-10 0/0:81.7838:13:13:485:0:0:0,-3.91339,-10 0/0:87.804:15:15:518:0:0:0,-4.51545,-10 0/0:99:54:54:2029:0:0:0,-10,-10 0/0:99:40:40:1445:0:0:0,-10,-10 0/0:78.7735:12:12:454:0:0:0,-3.61236,-10 0/0:51.6809:3:3:114:0:0:0,-0.90309,-10 0/0:63.7221:7:7:255:0:0:0,-2.10721,-10 0/0:78.7735:12:12:452:0:0:0,-3.61236,-10 0/0:99:35:35:1240:0:0:0,-10,-10 0/0:99:36:36:1348:0:0:0,-10,-10 0/0:99:36:36:1318:0:0:0,-10,-10 0/0:99:31:31:1156:0:0:0,-9.33193,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:69.7427:9:9:319:0:0:0,-2.70927,-10 0/0:99:22:22:774:0:0:0,-6.62266,-10 0/0:99:45:45:1684:0:0:0,-10,-10 0/0:84.7942:14:14:495:0:0:0,-4.21442,-10 0/0:99:30:30:1123:0:0:0,-9.0309,-10 0/0:84.7942:14:14:530:0:0:0,-4.21442,-10 0/0:99:27:27:1016:0:0:0,-8.12781,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:99:33:33:1241:0:0:0,-9.93399,-10 0/0:99:28:28:975:0:0:0,-8.42884,-10 0/0:66.7324:8:8:304:0:0:0,-2.40824,-10 0/0:99:21:21:747:0:0:0,-6.32163,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:57.7015:5:5:189:0:0:0,-1.50515,-10 0/0:57.7015:5:5:188:0:0:0,-1.50515,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:93.8254:17:17:638:0:0:0,-5.11751,-10 0/0:99:31:31:1138:0:0:0,-9.33193,-10 0/0:60.7118:6:6:228:0:0:0,-1.80618,-10 0/0:54.6912:4:4:143:0:0:0,-1.20412,-10 0/0:99:46:46:1711:0:0:0,-10,-10 0/0:93.8254:17:17:627:0:0:0,-5.11751,-10 0/0:96.8312:18:18:661:0:0:0,-5.41854,-10 0/0:99:28:28:1061:0:0:0,-8.42884,-10 0/0:99:31:31:1163:0:0:0,-9.33193,-10 0/0:78.7735:12:12:443:0:0:0,-3.61236,-10 0/0:99:34:34:1260:0:0:0,-10,-10 0/0:99:22:22:769:0:0:0,-6.62266,-10 0/0:99:33:33:1225:0:0:0,-9.93399,-10 0/0:99:54:54:2026:0:0:0,-10,-10 0/0:99:27:27:1019:0:0:0,-8.12781,-10 0/0:93.8254:17:17:617:0:0:0,-5.11751,-10 0/0:99:38:38:1388:0:0:0,-10,-10 0/0:84.7942:14:14:527:0:0:0,-4.21442,-10 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/0:90.8149:16:16:551:0:0:0,-4.81648,-10 0/0:66.7324:8:8:299:0:0:0,-2.40824,-10 0/0:99:41:41:1495:0:0:0,-10,-10 0/0:81.7838:13:13:455:0:0:0,-3.91339,-10 0/0:96.8312:18:18:658:0:0:0,-5.41854,-10 0/0:84.7942:14:14:502:0:0:0,-4.21442,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:75.7633:11:11:418:0:0:0,-3.31133,-10 0/0:99:32:32:1144:0:0:0,-9.63296,-10 0/0:96.8312:18:18:671:0:0:0,-5.41854,-10 0/0:99:41:41:1509:0:0:0,-10,-10 0/0:99:19:19:721:0:0:0,-5.71957,-10 0/0:93.8254:17:17:629:0:0:0,-5.11751,-10 0/0:99:24:24:836:0:0:0,-7.22472,-10 0/0:99:22:22:815:0:0:0,-6.62266,-10 0/0:75.7633:11:11:408:0:0:0,-3.31133,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:90.8149:16:16:577:0:0:0,-4.81648,-10 0/0:99:24:24:843:0:0:0,-7.22472,-10 0/0:99:19:19:678:0:0:0,-5.71957,-10 0/1:99:23:13:492:10:378:-10,0,-10 0/0:69.7427:9:9:323:0:0:0,-2.70927,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:75.7633:11:11:383:0:0:0,-3.31133,-10 0/0:99:22:22:798:0:0:0,-6.62266,-10 0/0:96.8312:18:18:684:0:0:0,-5.41854,-10 0/0:75.7633:11:11:418:0:0:0,-3.31133,-10 0/0:63.7221:7:7:255:0:0:0,-2.10721,-10 0/0:99:36:36:1304:0:0:0,-10,-10 0/0:99:30:30:1080:0:0:0,-9.0309,-10 0/0:90.8149:16:16:595:0:0:0,-4.81648,-10 0/0:99:22:22:828:0:0:0,-6.62266,-10 0/0:99:23:23:848:0:0:0,-6.92369,-10 0/0:54.6912:4:4:130:0:0:0,-1.20412,-10 0/0:72.753:10:10:360:0:0:0,-3.0103,-10 0/0:81.7838:13:13:465:0:0:0,-3.91339,-10 0/0:90.8149:16:16:606:0:0:0,-4.81648,-10 0/0:99:22:22:834:0:0:0,-6.62266,-10 0/0:99:32:32:1176:0:0:0,-9.63296,-10 0/0:81.7838:13:13:491:0:0:0,-3.91339,-10 scaffold_101 1370448 . C T 31358.5 . AB=0.516129;ABP=3.43058;AC=159;AF=0.86413;AN=184;AO=1030;CIGAR=1X;DP=1193;DPB=1193;DPRA=1.29032;EPP=21.6386;EPPR=7.81951;GTI=2;LEN=1;MEANALT=1;MQM=59.9748;MQMR=60;NS=92;NUMALT=1;ODDS=0.130463;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=38221;QR=5977;RO=163;RPP=2052.62;RPPR=348.328;RUN=1;SAF=490;SAP=8.28086;SAR=540;SRF=92;SRP=8.88527;SRR=71;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:34.8522:7:0:0:7:252:-10,-2.10721,0 1/1:31.8419:6:0:0:6:228:-10,-1.80618,0 1/1:55.9243:14:0:0:14:529:-10,-4.21442,0 1/1:64.9552:17:0:0:17:619:-10,-5.11751,0 1/1:58.9346:15:0:0:15:560:-10,-4.51545,0 1/1:43.8831:10:0:0:10:378:-10,-3.0103,0 1/1:99:31:0:0:31:1172:-10,-9.33193,0 1/1:73.9861:20:0:0:20:758:-10,-6.0206,0 1/1:31.8419:6:0:0:6:225:-10,-1.80618,0 1/1:22.811:3:0:0:3:92:-8.58667,-0.90309,0 1/1:22.811:3:0:0:3:114:-10,-0.90309,0 1/1:22.811:3:0:0:3:101:-9.42667,-0.90309,0 1/1:86.0272:24:0:0:24:905:-10,-7.22472,0 1/1:70.9758:19:0:0:19:696:-10,-5.71957,0 1/1:76.9964:21:0:0:21:762:-10,-6.32163,0 1/1:55.9243:14:0:0:14:532:-10,-4.21442,0 1/1:49.9037:12:0:0:12:456:-10,-3.61236,0 1/1:28.8316:5:0:0:5:190:-10,-1.50515,0 1/1:70.9758:19:0:0:19:711:-10,-5.71957,0 0/1:99:28:18:640:10:376:-10,0,-10 0/1:83.2204:10:3:112:7:262:-10,0,-9.52221 1/1:52.914:13:0:0:13:470:-10,-3.91339,0 0/0:6.81493:8:8:304:0:0:0,-2.40824,-10 0/1:99:10:4:128:6:226:-10,0,-10 1/1:34.8522:7:0:0:7:265:-10,-2.10721,0 0/1:99:18:11:405:7:266:-10,0,-10 1/1:28.8316:5:0:0:5:190:-10,-1.50515,0 1/1:52.914:13:0:0:13:482:-10,-3.91339,0 1/1:64.9552:17:0:0:17:644:-10,-5.11751,0 1/1:83.017:23:0:0:23:863:-10,-6.92369,0 1/1:22.811:3:0:0:3:114:-10,-0.90309,0 1/1:34.8522:7:0:0:7:212:-10,-2.10721,0 1/1:43.8831:10:0:0:10:380:-10,-3.0103,0 1/1:37.8625:8:0:0:8:304:-10,-2.40824,0 1/1:46.8934:11:0:0:11:418:-10,-3.31133,0 1/1:34.8522:7:0:0:7:266:-10,-2.10721,0 0/1:0.271248:7:7:261:0:0:0,-2.10721,-10 1/1:61.9449:16:0:0:16:606:-10,-4.81648,0 1/1:58.9346:15:0:0:15:558:-10,-4.51545,0 0/1:91.7594:7:5:190:2:76:-6.43501,0,-10 0/1:99:16:9:337:7:266:-10,0,-10 1/1:76.9964:21:0:0:21:770:-10,-6.32163,0 1/1:49.9037:12:0:0:12:455:-10,-3.61236,0 1/1:55.9243:14:0:0:14:532:-10,-4.21442,0 0/1:99:11:5:189:6:228:-10,0,-10 0/1:99:13:5:188:8:304:-10,0,-10 0/1:99:31:15:526:16:591:-10,0,-10 0/0:15.8458:11:11:417:0:0:0,-3.31133,-10 0/0:9.82523:9:9:337:0:0:0,-2.70927,-10 1/1:99:29:0:0:29:1101:-10,-8.72987,0 1/1:34.8522:7:0:0:7:243:-10,-2.10721,0 0/1:99:22:8:298:14:531:-10,0,-10 1/1:52.914:13:0:0:13:489:-10,-3.91339,0 1/1:25.8213:4:0:0:4:145:-10,-1.20412,0 0/1:99:20:7:262:13:488:-10,0,-10 0/1:0.0329939:4:4:152:0:0:0,-1.20412,-10 0/0:33.9076:17:17:627:0:0:0,-5.11751,-10 1/1:34.8522:7:0:0:7:243:-10,-2.10721,0 1/1:76.9964:21:0:0:21:790:-10,-6.32163,0 1/1:40.8728:9:0:0:9:338:-10,-2.70927,0 1/1:61.9449:16:0:0:16:605:-10,-4.81648,0 1/1:58.9346:15:0:0:15:547:-10,-4.51545,0 1/1:99:30:0:0:30:1112:-10,-9.0309,0 1/1:61.9449:16:0:0:16:599:-10,-4.81648,0 1/1:37.8625:8:0:0:8:304:-10,-2.40824,0 1/1:83.017:23:0:0:23:793:-10,-6.92369,0 1/1:55.9243:14:0:0:14:527:-10,-4.21442,0 1/1:40.8728:9:0:0:9:338:-10,-2.70927,0 1/1:64.9552:17:0:0:17:630:-10,-5.11751,0 1/1:43.8831:10:0:0:10:356:-10,-3.0103,0 1/1:28.8316:5:0:0:5:187:-10,-1.50515,0 1/1:76.9964:21:0:0:21:768:-10,-6.32163,0 1/1:61.9449:16:0:0:16:597:-10,-4.81648,0 1/1:58.9346:15:0:0:15:557:-10,-4.51545,0 1/1:83.017:23:0:0:23:834:-10,-6.92369,0 1/1:40.8728:9:0:0:9:327:-10,-2.70927,0 1/1:49.9037:12:0:0:12:406:-10,-3.61236,0 1/1:31.8419:6:0:0:6:227:-10,-1.80618,0 1/1:25.8213:4:0:0:4:152:-10,-1.20412,0 1/1:31.8419:6:0:0:6:205:-10,-1.80618,0 1/1:70.9758:19:0:0:19:717:-10,-5.71957,0 1/1:55.9243:14:0:0:14:514:-10,-4.21442,0 1/1:46.8934:11:0:0:11:417:-10,-3.31133,0 1/1:55.9243:14:0:0:14:528:-10,-4.21442,0 1/1:70.9758:19:0:0:19:717:-10,-5.71957,0 1/1:25.8213:4:0:0:4:140:-10,-1.20412,0 0/0:9.82523:9:9:327:0:0:0,-2.70927,-10 0/0:6.81493:8:8:277:0:0:0,-2.40824,-10 1/1:37.8625:8:0:0:8:283:-10,-2.40824,0 1/1:22.811:3:0:0:3:114:-10,-0.90309,0 1/1:64.9552:17:0:0:17:607:-10,-5.11751,0 1/1:40.8728:9:0:0:9:341:-10,-2.70927,0 scaffold_101 1370469 . C T 682.656 . AB=0.5625;ABP=4.6389;AC=3;AF=0.0163043;AN=184;AO=27;CIGAR=1X;DP=1193;DPB=1193;DPRA=1.24367;EPP=61.6401;EPPR=2521.93;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.982;NS=92;NUMALT=1;ODDS=5.58171;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1011;QR=42310;RO=1164;RPP=3.73412;RPPR=9.28593;RUN=1;SAF=15;SAP=3.73412;SAR=12;SRF=554;SRP=8.86059;SRR=610;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:36.4283:7:7:199:0:0:0,-2.10721,-10 0/0:33.418:6:6:228:0:0:0,-1.80618,-10 0/0:60.5107:15:15:568:0:0:0,-4.51545,-10 0/0:69.5416:18:18:633:0:0:0,-5.41854,-10 0/0:60.5107:15:15:507:0:0:0,-4.51545,-10 0/0:45.4592:10:10:380:0:0:0,-3.0103,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:75.5622:20:20:724:0:0:0,-6.0206,-10 0/0:30.4077:5:5:167:0:0:0,-1.50515,-10 0/0:24.3871:3:3:110:0:0:0,-0.90309,-10 0/0:24.3871:3:3:114:0:0:0,-0.90309,-10 0/0:24.3871:3:3:113:0:0:0,-0.90309,-10 0/0:90.6137:25:25:899:0:0:0,-7.52575,-10 0/0:78.5725:21:21:765:0:0:0,-6.32163,-10 0/0:78.5725:21:21:744:0:0:0,-6.32163,-10 0/0:57.5004:14:14:522:0:0:0,-4.21442,-10 0/0:51.4798:12:12:449:0:0:0,-3.61236,-10 0/0:27.3974:4:4:152:0:0:0,-1.20412,-10 0/0:72.5519:19:19:708:0:0:0,-5.71957,-10 0/0:99:30:30:1051:0:0:0,-9.0309,-10 0/0:45.4592:10:10:357:0:0:0,-3.0103,-10 0/0:54.4901:13:13:458:0:0:0,-3.91339,-10 0/0:39.4386:8:8:286:0:0:0,-2.40824,-10 0/0:45.4592:10:10:323:0:0:0,-3.0103,-10 0/0:36.4283:7:7:266:0:0:0,-2.10721,-10 0/0:69.5416:18:18:658:0:0:0,-5.41854,-10 0/0:30.4077:5:5:190:0:0:0,-1.50515,-10 0/0:51.4798:12:12:410:0:0:0,-3.61236,-10 0/0:63.521:16:16:601:0:0:0,-4.81648,-10 0/0:84.5931:23:23:869:0:0:0,-6.92369,-10 0/0:24.3871:3:3:113:0:0:0,-0.90309,-10 0/0:33.418:7:6:220:0:0:0,-1.80618,-10 0/0:45.4592:10:10:380:0:0:0,-3.0103,-10 0/0:39.4386:8:8:290:0:0:0,-2.40824,-10 0/0:48.4695:11:11:412:0:0:0,-3.31133,-10 0/0:36.4283:7:7:266:0:0:0,-2.10721,-10 0/0:36.4283:7:7:253:0:0:0,-2.10721,-10 0/0:63.521:16:16:606:0:0:0,-4.81648,-10 0/0:60.5107:15:15:558:0:0:0,-4.51545,-10 0/0:36.4283:7:7:264:0:0:0,-2.10721,-10 0/0:63.521:16:16:605:0:0:0,-4.81648,-10 0/0:78.5725:21:21:770:0:0:0,-6.32163,-10 0/0:51.4798:12:12:448:0:0:0,-3.61236,-10 0/0:57.5004:14:14:507:0:0:0,-4.21442,-10 0/0:48.4695:11:11:414:0:0:0,-3.31133,-10 0/0:54.4901:13:13:483:0:0:0,-3.91339,-10 0/0:99:31:31:1138:0:0:0,-9.33193,-10 0/0:48.4695:11:11:399:0:0:0,-3.31133,-10 0/0:42.4489:9:9:330:0:0:0,-2.70927,-10 0/0:99:29:29:1048:0:0:0,-8.72987,-10 0/0:33.418:6:6:204:0:0:0,-1.80618,-10 0/0:75.5622:20:20:744:0:0:0,-6.0206,-10 0/0:57.5004:14:14:513:0:0:0,-4.21442,-10 0/0:27.3974:4:4:106:0:0:0,-1.20412,-9.805 0/0:75.5622:20:20:688:0:0:0,-6.0206,-10 0/0:30.4077:5:5:189:0:0:0,-1.50515,-10 0/0:66.5313:17:17:632:0:0:0,-5.11751,-10 0/0:36.4283:7:7:241:0:0:0,-2.10721,-10 0/0:75.5622:20:20:730:0:0:0,-6.0206,-10 0/0:42.4489:9:9:329:0:0:0,-2.70927,-10 0/0:63.521:16:16:589:0:0:0,-4.81648,-10 0/0:60.5107:15:15:562:0:0:0,-4.51545,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/0:60.5107:15:15:548:0:0:0,-4.51545,-10 0/0:39.4386:8:8:304:0:0:0,-2.40824,-10 0/0:84.5931:23:23:795:0:0:0,-6.92369,-10 0/0:54.4901:13:13:487:0:0:0,-3.91339,-10 0/0:42.4489:9:9:340:0:0:0,-2.70927,-10 0/0:66.5313:17:17:619:0:0:0,-5.11751,-10 0/0:45.4592:10:10:348:0:0:0,-3.0103,-10 0/1:0.000149995:5:0:0:5:188:-10,-1.50515,0 0/1:99:21:9:340:12:447:-10,0,-10 0/0:66.5313:17:17:621:0:0:0,-5.11751,-10 0/0:60.5107:15:15:566:0:0:0,-4.51545,-10 0/1:99:22:12:456:10:376:-10,0,-10 0/0:42.4489:9:9:305:0:0:0,-2.70927,-10 0/0:51.4798:12:12:443:0:0:0,-3.61236,-10 0/0:33.418:6:6:203:0:0:0,-1.80618,-10 0/0:27.3974:4:4:147:0:0:0,-1.20412,-10 0/0:33.418:6:6:226:0:0:0,-1.80618,-10 0/0:72.5519:19:19:699:0:0:0,-5.71957,-10 0/0:57.5004:14:14:508:0:0:0,-4.21442,-10 0/0:48.4695:11:11:395:0:0:0,-3.31133,-10 0/0:57.5004:14:14:530:0:0:0,-4.21442,-10 0/0:75.5622:21:20:692:0:0:0,-6.0206,-10 0/0:27.3974:4:4:141:0:0:0,-1.20412,-10 0/0:42.4489:9:9:325:0:0:0,-2.70927,-10 0/0:39.4386:8:8:267:0:0:0,-2.40824,-10 0/0:39.4386:8:8:277:0:0:0,-2.40824,-10 0/0:24.3871:3:3:114:0:0:0,-0.90309,-10 0/0:63.521:16:16:566:0:0:0,-4.81648,-10 0/0:42.4489:9:9:341:0:0:0,-2.70927,-10 scaffold_101 1391151 . C T 3481.42 . AB=0.536585;ABP=5.87029;AC=11;AF=0.0597826;AN=184;AO=133;CIGAR=1X;DP=2237;DPB=2237;DPRA=0.930548;EPP=3.81032;EPPR=3.07642;GTI=4;LEN=1;MEANALT=1;MQM=60;MQMR=59.9957;NS=92;NUMALT=1;ODDS=1.78145;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4789;QR=76002;RO=2102;RPP=291.816;RPPR=4567.45;RUN=1;SAF=70;SAP=3.81032;SAR=63;SRF=1047;SRP=3.07642;SRR=1055;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:76.4504:19:19:686:0:0:0,-5.71957,-10 0/0:52.3681:11:11:406:0:0:0,-3.31133,-10 0/1:99:24:15:541:9:342:-10,0,-10 0/0:82.4709:21:21:767:0:0:0,-6.32163,-10 0/0:64.4093:15:15:516:0:0:0,-4.51545,-10 0/0:43.3372:8:8:299:0:0:0,-2.40824,-10 0/0:99:42:42:1565:0:0:0,-10,-10 0/0:54.1295:28:27:972:1:38:0,-3.18168,-10 0/0:76.4504:19:19:665:0:0:0,-5.71957,-10 0/1:0.000297189:5:0:0:5:184:-10,-1.50515,0 0/0:40.3269:7:7:257:0:0:0,-2.10721,-10 0/0:46.3475:9:9:340:0:0:0,-2.70927,-10 0/0:99:33:33:1118:0:0:0,-9.93399,-10 0/0:99:44:44:1540:0:0:0,-10,-10 0/0:99:32:32:1129:0:0:0,-9.63296,-10 0/1:99:24:14:525:10:346:-10,0,-10 0/0:88.491:23:23:808:0:0:0,-6.92369,-10 0/0:58.3887:13:13:421:0:0:0,-3.91339,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:99:50:50:1786:0:0:0,-10,-10 0/0:64.4093:15:15:535:0:0:0,-4.51545,-10 0/0:99:40:40:1475:0:0:0,-10,-10 0/0:55.3784:12:12:454:0:0:0,-3.61236,-10 0/0:99:33:33:1184:0:0:0,-9.93399,-10 0/0:99:30:30:1026:0:0:0,-9.0309,-10 0/0:99:41:41:1482:0:0:0,-10,-10 0/0:88.491:23:23:823:0:0:0,-6.92369,-10 0/0:55.3784:12:12:447:0:0:0,-3.61236,-10 0/0:82.4709:21:21:734:0:0:0,-6.32163,-10 0/0:99:49:48:1775:0:0:0,-10,-10 0/0:43.3372:8:8:266:0:0:0,-2.40824,-10 0/0:34.3063:5:5:168:0:0:0,-1.50515,-10 0/0:91.5007:24:24:881:0:0:0,-7.22472,-10 0/0:31.296:4:4:128:0:0:0,-1.20412,-10 0/0:88.491:23:23:813:0:0:0,-6.92369,-10 0/0:58.3887:13:13:453:0:0:0,-3.91339,-10 0/0:64.4093:15:15:531:0:0:0,-4.51545,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:99:32:31:1108:0:0:0,-9.33193,-10 0/0:79.4608:20:20:726:0:0:0,-6.0206,-10 0/0:99:35:35:1234:0:0:0,-10,-10 0/1:2.26718e-05:17:1:38:16:583:-10,-0.087061,0 0/0:99:34:34:1212:0:0:0,-10,-10 0/0:99:51:51:1854:0:0:0,-10,-10 0/0:99:31:31:1172:0:0:0,-9.33193,-10 0/0:61.399:14:14:507:0:0:0,-4.21442,-10 0/0:99:57:57:2043:0:0:0,-10,-10 0/0:99:27:27:974:0:0:0,-8.12781,-10 0/0:76.4504:19:19:680:0:0:0,-5.71957,-10 0/0:99:44:44:1611:0:0:0,-10,-10 0/0:46.3475:9:9:292:0:0:0,-2.70927,-10 0/0:99:42:42:1563:0:0:0,-10,-10 0/0:94.5097:25:25:879:0:0:0,-7.52575,-10 0/0:52.3681:11:11:380:0:0:0,-3.31133,-10 0/0:99:47:47:1725:0:0:0,-10,-10 0/0:67.4196:16:16:548:0:0:0,-4.81648,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/1:0.00237808:8:0:0:8:292:-10,-2.40824,0 0/0:82.4709:21:21:786:0:0:0,-6.32163,-10 0/1:0.00118888:7:0:0:7:235:-10,-2.10721,0 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:99:31:31:1165:0:0:0,-9.33193,-10 0/1:99:49:24:869:25:901:-10,0,-10 0/0:64.4093:15:15:557:0:0:0,-4.51545,-10 0/0:70.4299:17:17:599:0:0:0,-5.11751,-10 0/1:99:48:26:955:22:807:-10,0,-10 0/1:99:38:19:705:19:665:-10,0,-10 0/0:58.3887:13:13:473:0:0:0,-3.91339,-10 0/0:99:54:54:1944:0:0:0,-10,-10 0/0:55.3784:12:12:432:0:0:0,-3.61236,-10 0/0:52.3681:11:11:397:0:0:0,-3.31133,-10 0/0:99:45:45:1651:0:0:0,-10,-10 0/0:85.4814:22:22:803:0:0:0,-6.62266,-10 0/0:91.5007:24:24:837:0:0:0,-7.22472,-10 0/0:99:42:42:1541:0:0:0,-10,-10 0/0:76.4504:19:19:688:0:0:0,-5.71957,-10 0/0:73.4402:18:18:667:0:0:0,-5.41854,-10 0/0:82.4709:21:21:792:0:0:0,-6.32163,-10 0/0:34.3063:5:5:184:0:0:0,-1.50515,-10 0/0:61.399:14:14:488:0:0:0,-4.21442,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:99:38:38:1374:0:0:0,-10,-10 0/0:99:27:27:960:0:0:0,-8.12781,-10 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:31.296:4:4:125:0:0:0,-1.20412,-10 0/0:99:27:27:1015:0:0:0,-8.12781,-10 0/0:64.4093:15:15:568:0:0:0,-4.51545,-10 0/0:34.3063:5:5:183:0:0:0,-1.50515,-10 0/1:99:19:9:342:10:358:-10,0,-10 0/1:8.42901:7:6:206:1:38:-2.53789,0,-10 0/0:82.4709:21:21:778:0:0:0,-6.32163,-10 scaffold_101 1418324 . G A 951.579 . AB=1;ABP=11.6962;AC=3;AF=0.0163043;AN=184;AO=39;CIGAR=1X;DP=1935;DPB=1935;DPRA=0.925633;EPP=5.73856;EPPR=24.5176;GTI=1;LEN=1;MEANALT=1;MQM=59.7179;MQMR=59.6612;NS=92;NUMALT=1;ODDS=3.39001;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1393;QR=68762;RO=1895;RPP=87.6977;RPPR=4117.95;RUN=1;SAF=16;SAP=5.73856;SAR=23;SRF=1016;SRP=24.5176;SRR=879;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:81.2154:23:23:865:0:0:0,-6.92369,-10 0/0:33.0506:7:7:260:0:0:0,-2.10721,-10 0/0:99:30:30:1078:0:0:0,-9.0309,-10 0/0:48.1021:12:12:441:0:0:0,-3.61236,-10 0/0:45.0918:11:11:394:0:0:0,-3.31133,-10 0/0:48.1021:12:12:456:0:0:0,-3.61236,-10 0/0:99:44:44:1606:0:0:0,-10,-10 0/0:99:33:33:1187:0:0:0,-9.93399,-10 0/0:42.0815:10:10:340:0:0:0,-3.0103,-10 0/0:39.0712:9:9:337:0:0:0,-2.70927,-10 0/0:30.0403:6:6:228:0:0:0,-1.80618,-10 0/0:45.0918:11:11:404:0:0:0,-3.31133,-10 0/0:99:42:42:1506:0:0:0,-10,-10 0/0:84.2256:24:24:855:0:0:0,-7.22472,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:75.1948:21:21:753:0:0:0,-6.32163,-10 0/0:48.1021:12:12:444:0:0:0,-3.61236,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:99:37:37:1360:0:0:0,-10,-10 0/0:93.2557:27:27:998:0:0:0,-8.12781,-10 0/0:96.2652:28:28:1026:0:0:0,-8.42884,-10 0/0:42.0815:10:10:353:0:0:0,-3.0103,-10 0/0:66.1639:18:18:631:0:0:0,-5.41854,-10 0/0:66.1639:18:18:657:0:0:0,-5.41854,-10 0/0:96.2652:28:28:957:0:0:0,-8.42884,-10 0/0:69.1742:19:19:708:0:0:0,-5.71957,-10 0/0:42.0815:10:10:359:0:0:0,-3.0103,-10 0/0:72.1845:20:20:730:0:0:0,-6.0206,-10 0/0:99:34:34:1253:0:0:0,-10,-10 0/0:17.9991:2:2:69:0:0:0,-0.60206,-6.555 0/0:33.0506:7:7:262:0:0:0,-2.10721,-10 0/0:60.1433:16:16:593:0:0:0,-4.81648,-10 0/0:45.0918:11:11:413:0:0:0,-3.31133,-10 0/0:78.2051:22:22:810:0:0:0,-6.62266,-10 0/0:30.0403:6:6:206:0:0:0,-1.80618,-10 0/0:51.1124:13:13:465:0:0:0,-3.91339,-10 0/0:87.2358:25:25:920:0:0:0,-7.52575,-10 0/0:48.1021:12:12:445:0:0:0,-3.61236,-10 0/0:24.0197:4:4:152:0:0:0,-1.20412,-10 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:87.2358:25:25:887:0:0:0,-7.52575,-10 0/0:54.1227:14:14:478:0:0:0,-4.21442,-10 0/0:96.2652:28:28:1037:0:0:0,-8.42884,-10 0/0:72.1845:20:20:692:0:0:0,-6.0206,-10 0/0:45.0918:11:11:390:0:0:0,-3.31133,-10 0/0:99:55:55:2017:0:0:0,-10,-10 0/0:99:34:34:1178:0:0:0,-10,-10 0/0:63.1536:17:17:627:0:0:0,-5.11751,-10 0/0:99:40:40:1462:0:0:0,-10,-10 0/0:51.1124:13:13:467:0:0:0,-3.91339,-10 0/0:99:41:41:1483:0:0:0,-10,-10 0/0:75.1948:21:21:789:0:0:0,-6.32163,-10 0/0:36.0609:8:8:246:0:0:0,-2.40824,-10 0/0:99:47:47:1690:0:0:0,-10,-10 0/0:60.1433:16:16:580:0:0:0,-4.81648,-10 0/0:87.2358:25:25:914:0:0:0,-7.52575,-10 0/0:14.9888:1:1:38:0:0:0,-0.30103,-3.8 0/0:81.2154:23:23:799:0:0:0,-6.92369,-10 0/0:54.1227:14:14:495:0:0:0,-4.21442,-10 0/0:99:32:31:1172:0:0:0,-9.33193,-10 0/0:54.1227:14:14:503:0:0:0,-4.21442,-10 0/0:99:32:32:1129:0:0:0,-9.63296,-10 0/0:63.1536:17:17:631:0:0:0,-5.11751,-10 0/0:45.0918:11:11:416:0:0:0,-3.31133,-10 0/0:99:37:37:1311:0:0:0,-10,-10 0/0:84.2256:24:24:876:0:0:0,-7.22472,-10 0/0:45.0918:11:11:416:0:0:0,-3.31133,-10 0/0:99:44:44:1585:0:0:0,-10,-10 0/0:57.133:15:15:510:0:0:0,-4.51545,-10 0/0:63.1536:17:17:637:0:0:0,-5.11751,-10 0/0:99:34:34:1249:0:0:0,-10,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:78.2051:22:22:803:0:0:0,-6.62266,-10 0/0:99:35:35:1205:0:0:0,-10,-10 0/0:48.1021:12:12:430:0:0:0,-3.61236,-10 0/0:63.1536:17:17:633:0:0:0,-5.11751,-10 0/0:45.0918:11:11:377:0:0:0,-3.31133,-10 0/1:0.00834952:4:0:0:4:147:-10,-1.20412,0 0/0:57.133:15:15:557:0:0:0,-4.51545,-10 1/1:55.8797:35:0:0:35:1246:-10,-10,0 0/0:99:35:35:1320:0:0:0,-10,-10 0/0:93.2557:27:27:969:0:0:0,-8.12781,-10 0/0:81.2154:23:23:833:0:0:0,-6.92369,-10 0/0:99:32:32:1209:0:0:0,-9.63296,-10 0/0:27.03:5:5:163:0:0:0,-1.50515,-10 0/0:72.1845:20:20:718:0:0:0,-6.0206,-10 0/0:39.0712:9:9:322:0:0:0,-2.70927,-10 0/0:45.0918:11:11:373:0:0:0,-3.31133,-10 0/0:51.1124:13:13:484:0:0:0,-3.91339,-10 0/0:66.1639:18:18:678:0:0:0,-5.41854,-10 0/0:51.1124:13:13:475:0:0:0,-3.91339,-10 scaffold_101 1437862 . C G 3359.4 . AB=0.618056;ABP=20.4424;AC=16;AF=0.0860215;AN=186;AO=131;CIGAR=1X;DP=1667;DPB=1667;DPRA=0.772867;EPP=3.82253;EPPR=3.0103;GTI=4;LEN=1;MEANALT=1;MQM=59.9771;MQMR=59.9713;NS=93;NUMALT=1;ODDS=0.69307;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4740;QR=55625;RO=1534;RPP=287.473;RPPR=3334.05;RUN=1;SAF=62;SAP=3.82253;SAR=69;SRF=767;SRP=3.0103;SRR=767;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.2651:12:12:443:0:0:0,-3.61236,-10 0/1:0.22425:9:0:0:9:262:-10,-2.70927,0 0/1:99:18:5:185:13:467:-10,0,-10 0/0:59.2754:13:13:461:0:0:0,-3.91339,-10 0/0:59.2754:13:13:491:0:0:0,-3.91339,-10 0/0:59.2754:13:13:471:0:0:0,-3.91339,-10 0/0:99:45:44:1601:0:0:0,-10,-10 0/0:86.3678:22:22:795:0:0:0,-6.62266,-10 0/0:92.3873:24:24:908:0:0:0,-7.22472,-10 0/1:0.00341632:3:0:0:3:105:-9.8,-0.90309,0 0/0:44.2239:8:8:303:0:0:0,-2.40824,-10 0/0:53.2548:11:11:375:0:0:0,-3.31133,-10 0/0:99:34:34:1278:0:0:0,-10,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:83.3577:21:21:767:0:0:0,-6.32163,-10 0/1:99:13:7:262:6:226:-10,0,-10 0/0:92.3873:25:24:868:0:0:0,-7.22472,-10 0/0:47.2342:9:9:333:0:0:0,-2.70927,-10 0/0:98.4035:26:26:960:0:0:0,-7.82678,-10 0/0:99:33:33:1167:0:0:0,-9.93399,-10 0/0:68.3063:16:16:583:0:0:0,-4.81648,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:71.3166:17:17:584:0:0:0,-5.11751,-10 0/0:83.3577:21:21:792:0:0:0,-6.32163,-10 0/0:80.3475:20:20:737:0:0:0,-6.0206,-10 0/0:89.3786:23:23:818:0:0:0,-6.92369,-10 0/0:62.2857:14:14:483:0:0:0,-4.21442,-10 0/0:65.296:15:15:570:0:0:0,-4.51545,-10 0/0:89.3786:23:23:853:0:0:0,-6.92369,-10 0/0:99:44:44:1593:0:0:0,-10,-10 0/0:59.2754:13:13:486:0:0:0,-3.91339,-10 0/0:56.2651:12:12:456:0:0:0,-3.61236,-10 0/0:80.3475:20:20:728:0:0:0,-6.0206,-10 0/0:53.2548:11:11:417:0:0:0,-3.31133,-10 0/0:89.3786:23:23:848:0:0:0,-6.92369,-10 0/0:50.2445:10:10:379:0:0:0,-3.0103,-10 0/0:50.2445:10:10:379:0:0:0,-3.0103,-10 0/0:99:27:27:916:0:0:0,-8.12781,-10 0/0:35.193:5:5:190:0:0:0,-1.50515,-10 0/0:59.2754:13:13:461:0:0:0,-3.91339,-10 0/0:99:27:27:950:0:0:0,-8.12781,-10 0/0:41.2136:7:7:259:0:0:0,-2.10721,-10 0/0:56.2651:12:12:409:0:0:0,-3.61236,-10 0/0:99:30:30:1005:0:0:0,-9.0309,-10 0/0:95.3995:25:25:901:0:0:0,-7.52575,-10 0/0:71.3166:17:17:631:0:0:0,-5.11751,-10 0/0:99:42:42:1486:0:0:0,-10,-10 0/0:92.3873:24:24:837:0:0:0,-7.22472,-10 0/0:53.2548:11:11:414:0:0:0,-3.31133,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 0/0:56.2651:12:12:434:0:0:0,-3.61236,-10 0/0:95.3995:25:25:920:0:0:0,-7.52575,-10 0/0:47.2342:9:9:331:0:0:0,-2.70927,-10 0/0:50.2445:10:10:379:0:0:0,-3.0103,-10 0/0:99:27:27:936:0:0:0,-8.12781,-10 0/0:53.2548:11:11:394:0:0:0,-3.31133,-10 0/0:83.3577:21:21:765:0:0:0,-6.32163,-10 1/1:13.2372:13:0:0:13:460:-10,-3.91339,0 0/0:53.2548:11:11:416:0:0:0,-3.31133,-10 0/1:0.976163:11:0:0:11:393:-10,-3.31133,0 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:62.2857:14:14:526:0:0:0,-4.21442,-10 0/0:99:29:29:1047:0:0:0,-8.72987,-10 0/0:53.2548:11:11:418:0:0:0,-3.31133,-10 0/0:56.2651:12:12:403:0:0:0,-3.61236,-10 0/1:99:24:11:412:13:481:-10,0,-10 0/1:99:15:9:316:6:228:-10,0,-10 0/0:50.2445:10:10:380:0:0:0,-3.0103,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:62.2857:14:14:520:0:0:0,-4.21442,-10 0/0:56.2651:12:12:450:0:0:0,-3.61236,-10 0/0:92.3873:24:24:880:0:0:0,-7.22472,-10 0/0:74.3269:18:18:614:0:0:0,-5.41854,-10 0/0:74.3269:18:18:655:0:0:0,-5.41854,-10 0/0:89.3786:23:23:836:0:0:0,-6.92369,-10 0/0:53.2548:11:11:384:0:0:0,-3.31133,-10 0/1:0.460712:10:0:0:10:366:-10,-3.0103,0 0/0:44.2239:8:8:297:0:0:0,-2.40824,-10 0/0:41.2136:7:7:255:0:0:0,-2.10721,-10 0/0:44.2239:8:8:297:0:0:0,-2.40824,-10 0/0:98.4035:26:26:915:0:0:0,-7.82678,-10 0/1:99:17:9:333:8:293:-10,0,-10 0/1:99:24:14:527:10:376:-10,0,-10 0/0:74.3269:18:18:652:0:0:0,-5.41854,-10 0/0:71.3166:17:17:641:0:0:0,-5.11751,-10 0/0:41.2136:7:7:266:0:0:0,-2.10721,-10 0/0:86.3678:22:22:801:0:0:0,-6.62266,-10 0/0:59.2754:13:13:463:0:0:0,-3.91339,-10 1/1:7.21663:11:0:0:11:404:-10,-3.31133,0 0/0:77.3372:19:19:639:0:0:0,-5.71957,-10 1/1:28.2887:18:0:0:18:679:-10,-5.41854,0 0/0:77.3372:19:19:706:0:0:0,-5.71957,-10 scaffold_101 1445080 . C T 285.063 . AB=0.444444;ABP=3.73412;AC=1;AF=0.00543478;AN=184;AO=12;CIGAR=1X;DP=1962;DPB=1962;DPRA=1.26977;EPP=9.52472;EPPR=3.29538;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9697;NS=92;NUMALT=1;ODDS=11.741;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=449;QR=71190;RO=1950;RPP=29.068;RPPR=4237.38;RUN=1;SAF=3;SAP=9.52472;SAR=9;SRF=983;SRP=3.29538;SRR=967;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.0629:12:12:412:0:0:0,-3.61236,-10 0/0:90.1239:18:18:669:0:0:0,-5.41854,-10 0/0:96.1423:20:20:721:0:0:0,-6.0206,-10 0/0:78.0834:14:14:492:0:0:0,-4.21442,-10 0/0:78.0834:14:14:504:0:0:0,-4.21442,-10 0/0:57.0114:7:7:261:0:0:0,-2.10721,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:99:26:26:936:0:0:0,-7.82678,-10 0/0:72.0629:12:12:456:0:0:0,-3.61236,-10 0/0:69.0526:11:11:418:0:0:0,-3.31133,-10 0/0:66.0423:10:10:380:0:0:0,-3.0103,-10 0/0:66.0423:10:10:376:0:0:0,-3.0103,-10 0/0:99:27:27:1000:0:0:0,-8.12781,-10 0/0:99:24:24:905:0:0:0,-7.22472,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:99:28:28:1018:0:0:0,-8.42884,-10 0/0:60.0217:8:8:304:0:0:0,-2.40824,-10 0/0:87.114:17:17:603:0:0:0,-5.11751,-10 0/0:99:39:39:1397:0:0:0,-10,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:84.1039:16:16:569:0:0:0,-4.81648,-10 0/0:99:22:22:814:0:0:0,-6.62266,-10 0/0:84.1039:16:16:566:0:0:0,-4.81648,-10 0/0:99:26:26:937:0:0:0,-7.82678,-10 0/0:84.1039:16:16:587:0:0:0,-4.81648,-10 0/0:75.0732:13:13:482:0:0:0,-3.91339,-10 0/0:99:24:24:892:0:0:0,-7.22472,-10 0/0:99:40:40:1436:0:0:0,-10,-10 0/0:50.9908:5:5:190:0:0:0,-1.50515,-10 0/0:69.0526:11:11:414:0:0:0,-3.31133,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:69.0526:11:11:372:0:0:0,-3.31133,-10 0/0:99:32:32:1140:0:0:0,-9.63296,-10 0/0:69.0526:11:11:418:0:0:0,-3.31133,-10 0/0:60.0217:8:8:280:0:0:0,-2.40824,-10 0/0:99:41:41:1482:0:0:0,-10,-10 0/0:93.1355:19:19:673:0:0:0,-5.71957,-10 0/0:69.0526:11:11:394:0:0:0,-3.31133,-10 0/0:99:22:22:822:0:0:0,-6.62266,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 0/0:78.0834:14:14:531:0:0:0,-4.21442,-10 0/0:99:34:34:1238:0:0:0,-10,-10 0/0:99:23:23:854:0:0:0,-6.92369,-10 0/0:99:23:23:842:0:0:0,-6.92369,-10 0/0:99:45:45:1629:0:0:0,-10,-10 0/0:99:25:25:871:0:0:0,-7.52575,-10 0/0:90.1239:18:18:678:0:0:0,-5.41854,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:63.032:9:9:342:0:0:0,-2.70927,-10 0/0:99:42:42:1518:0:0:0,-10,-10 0/0:90.1239:18:18:641:0:0:0,-5.41854,-10 0/0:60.0217:8:8:301:0:0:0,-2.40824,-10 0/0:99:35:35:1249:0:0:0,-10,-10 0/0:87.114:17:17:610:0:0:0,-5.11751,-10 0/0:99:25:25:919:0:0:0,-7.52575,-10 0/0:75.0732:13:13:459:0:0:0,-3.91339,-10 0/0:87.114:17:17:637:0:0:0,-5.11751,-10 0/0:81.0937:15:15:560:0:0:0,-4.51545,-10 0/0:99:52:52:1863:0:0:0,-10,-10 0/0:96.1423:20:20:728:0:0:0,-6.0206,-10 0/0:99:41:41:1528:0:0:0,-10,-10 0/0:99:21:21:786:0:0:0,-6.32163,-10 0/0:63.032:9:9:334:0:0:0,-2.70927,-10 0/0:99:22:22:818:0:0:0,-6.62266,-10 0/0:99:27:27:1014:0:0:0,-8.12781,-10 0/0:63.032:9:9:336:0:0:0,-2.70927,-10 0/0:99:40:40:1460:0:0:0,-10,-10 0/0:66.0423:10:10:347:0:0:0,-3.0103,-10 0/0:87.114:17:17:620:0:0:0,-5.11751,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/1:99:27:15:558:12:449:-10,0,-10 0/0:75.0732:13:13:479:0:0:0,-3.91339,-10 0/0:99:29:29:990:0:0:0,-8.72987,-10 0/0:96.1423:20:20:727:0:0:0,-6.0206,-10 0/0:84.1039:16:16:595:0:0:0,-4.81648,-10 0/0:81.0937:15:15:522:0:0:0,-4.51545,-10 0/0:54.0011:6:6:226:0:0:0,-1.80618,-10 0/0:81.0937:15:15:560:0:0:0,-4.51545,-10 0/0:99:35:35:1266:0:0:0,-10,-10 0/0:99:31:31:1156:0:0:0,-9.33193,-10 0/0:99:22:22:793:0:0:0,-6.62266,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:99:22:22:816:0:0:0,-6.62266,-10 0/0:63.032:9:9:340:0:0:0,-2.70927,-10 0/0:99:23:23:872:0:0:0,-6.92369,-10 0/0:63.032:9:9:324:0:0:0,-2.70927,-10 0/0:99:21:21:794:0:0:0,-6.32163,-10 0/0:72.0629:12:12:439:0:0:0,-3.61236,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:90.1239:18:18:626:0:0:0,-5.41854,-10 scaffold_101 1468912 . G C 760.81 . AB=0.608696;ABP=7.73089;AC=2;AF=0.0108696;AN=184;AO=28;CIGAR=1X;DP=2005;DPB=2005;DPRA=1.05666;EPP=3.0103;EPPR=3.06428;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9518;NS=92;NUMALT=1;ODDS=6.1134;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1054;QR=71554;RO=1971;RPP=47.6806;RPPR=3560.67;RUN=1;SAF=12;SAP=4.25114;SAR=16;SRF=986;SRP=3.0114;SRR=985;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:80.7585:20:20:695:0:0:0,-6.0206,-10 0/0:98.8143:26:26:942:0:0:0,-7.82678,-10 0/0:99:30:30:1073:0:0:0,-9.0309,-10 0/0:83.7687:21:21:751:0:0:0,-6.32163,-10 0/0:65.7071:15:15:565:0:0:0,-4.51545,-10 0/0:41.6247:7:7:253:0:0:0,-2.10721,-10 0/0:99:39:39:1453:0:0:0,-10,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:50.6556:10:10:380:0:0:0,-3.0103,-10 0/0:29.5835:3:3:67:0:0:0,-0.90309,-6.25333 0/1:0.000178322:9:0:0:9:342:-10,-2.70927,0 0/0:29.5835:3:3:114:0:0:0,-0.90309,-10 0/0:99:41:41:1483:0:0:0,-10,-10 0/1:99:37:18:669:19:712:-10,0,-10 0/0:92.7982:24:24:848:0:0:0,-7.22472,-10 0/0:92.7982:24:24:881:0:0:0,-7.22472,-10 0/0:68.7173:16:16:591:0:0:0,-4.81648,-10 0/0:41.6247:7:7:262:0:0:0,-2.10721,-10 0/0:77.7482:19:19:677:0:0:0,-5.71957,-10 0/0:99:36:36:1305:0:0:0,-10,-10 0/0:71.7276:17:17:586:0:0:0,-5.11751,-10 0/0:89.7887:23:23:865:0:0:0,-6.92369,-10 0/0:44.635:8:8:248:0:0:0,-2.40824,-10 0/0:99:32:32:1155:0:0:0,-9.63296,-10 0/0:71.7276:17:17:635:0:0:0,-5.11751,-10 0/0:83.7687:21:21:754:0:0:0,-6.32163,-10 0/0:92.7982:24:24:883:0:0:0,-7.22472,-10 0/0:71.7276:18:17:611:0:0:0,-5.11751,-10 0/0:74.7379:18:18:660:0:0:0,-5.41854,-10 0/0:99:42:42:1447:0:0:0,-10,-10 0/0:50.6556:10:10:367:0:0:0,-3.0103,-10 0/0:44.635:8:8:303:0:0:0,-2.40824,-10 0/0:99:32:32:1202:0:0:0,-9.63296,-10 0/0:50.6556:10:10:355:0:0:0,-3.0103,-10 0/0:99:27:27:1015:0:0:0,-8.12781,-10 0/0:26.5732:2:2:54:0:0:0,-0.60206,-5.13 0/0:56.6762:12:12:442:0:0:0,-3.61236,-10 0/0:99:34:34:1251:0:0:0,-10,-10 0/0:89.7887:23:23:853:0:0:0,-6.92369,-10 0/0:59.6865:13:13:488:0:0:0,-3.91339,-10 0/0:99:31:30:1133:0:0:0,-9.0309,-10 0/0:74.7379:18:18:648:0:0:0,-5.41854,-10 0/0:92.7982:24:24:898:0:0:0,-7.22472,-10 0/0:99:40:40:1451:0:0:0,-10,-10 0/0:74.7379:18:18:648:0:0:0,-5.41854,-10 0/0:86.7788:22:22:788:0:0:0,-6.62266,-10 0/0:99:58:57:2093:0:0:0,-10,-10 0/0:99:38:38:1407:0:0:0,-10,-10 0/0:59.6865:14:13:486:0:0:0,-3.91339,-10 0/0:99:44:43:1581:0:0:0,-10,-10 0/0:92.7982:24:24:854:0:0:0,-7.22472,-10 0/0:99:36:36:1275:0:0:0,-10,-10 0/0:77.7482:19:19:671:0:0:0,-5.71957,-10 0/0:44.635:8:8:291:0:0:0,-2.40824,-10 0/0:99:50:50:1850:0:0:0,-10,-10 0/0:80.7585:20:20:740:0:0:0,-6.0206,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:53.6659:11:11:399:0:0:0,-3.31133,-10 0/0:68.7173:16:16:575:0:0:0,-4.81648,-10 0/0:62.6968:14:14:501:0:0:0,-4.21442,-10 0/0:99:30:30:1042:0:0:0,-9.0309,-10 0/0:83.7687:21:21:773:0:0:0,-6.32163,-10 0/0:99:35:35:1268:0:0:0,-10,-10 0/0:86.7788:23:22:777:0:0:0,-6.62266,-10 0/0:71.7276:17:17:596:0:0:0,-5.11751,-10 0/0:99:30:30:1080:0:0:0,-9.0309,-10 0/0:77.7482:19:19:679:0:0:0,-5.71957,-10 0/0:62.6968:14:14:526:0:0:0,-4.21442,-10 0/0:99:35:35:1229:0:0:0,-10,-10 0/0:62.6968:14:14:504:0:0:0,-4.21442,-10 0/0:77.7482:19:19:702:0:0:0,-5.71957,-10 0/0:98.8143:26:26:980:0:0:0,-7.82678,-10 0/0:99:30:30:1066:0:0:0,-9.0309,-10 0/0:65.7071:15:15:566:0:0:0,-4.51545,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:74.7379:18:18:672:0:0:0,-5.41854,-10 0/0:53.6659:11:11:412:0:0:0,-3.31133,-10 0/0:71.7276:17:17:634:0:0:0,-5.11751,-10 0/0:38.6144:6:6:228:0:0:0,-1.80618,-10 0/0:74.7379:18:18:609:0:0:0,-5.41854,-10 0/0:99:31:31:1114:0:0:0,-9.33193,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/0:74.7379:18:18:649:0:0:0,-5.41854,-10 0/0:99:29:29:1013:0:0:0,-8.72987,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/0:35.6041:5:5:190:0:0:0,-1.50515,-10 0/0:53.6659:11:11:396:0:0:0,-3.31133,-10 0/0:62.6968:14:14:505:0:0:0,-4.21442,-10 0/0:38.6144:6:6:204:0:0:0,-1.80618,-10 0/0:86.7788:22:22:834:0:0:0,-6.62266,-10 0/0:80.7585:20:20:748:0:0:0,-6.0206,-10 0/0:71.7276:17:17:601:0:0:0,-5.11751,-10 scaffold_101 1468925 . G A 5332.13 . AB=0.485401;ABP=3.51751;AC=14;AF=0.076087;AN=184;AO=193;CIGAR=1X;DP=1995;DPB=1995;DPRA=1.48604;EPP=3.29158;EPPR=8.92153;GTI=0;LEN=1;MEANALT=1.09091;MQM=59.9948;MQMR=59.9478;NS=92;NUMALT=1;ODDS=1.17354;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7092;QR=65764;RO=1800;RPP=413.464;RPPR=3580.25;RUN=1;SAF=93;SAP=3.56161;SAR=100;SRF=896;SRP=3.08751;SRR=904;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.7096:20:20:747:0:0:0,-6.0206,-10 0/0:76.7611:26:25:883:0:0:0,-7.52575,-10 0/0:91.8109:30:30:1067:0:0:0,-9.0309,-10 0/0:64.7199:21:21:786:0:0:0,-6.32163,-10 0/0:46.6581:15:15:566:0:0:0,-4.51545,-10 0/0:22.5757:7:7:250:0:0:0,-2.10721,-10 0/0:99:39:39:1454:0:0:0,-10,-10 0/0:85.7916:28:28:1016:0:0:0,-8.42884,-10 0/0:31.6066:10:10:379:0:0:0,-3.0103,-10 0/0:10.5345:3:3:94:0:0:0,-0.90309,-8.77333 0/0:28.5963:9:9:322:0:0:0,-2.70927,-10 0/0:10.5345:3:3:113:0:0:0,-0.90309,-10 0/0:99:40:40:1448:0:0:0,-10,-10 0/0:99:37:37:1363:0:0:0,-10,-10 0/0:73.7508:24:24:888:0:0:0,-7.22472,-10 0/0:73.7508:24:24:878:0:0:0,-7.22472,-10 0/0:49.6684:16:16:598:0:0:0,-4.81648,-10 0/0:22.5757:7:7:256:0:0:0,-2.10721,-10 0/0:58.6993:19:19:713:0:0:0,-5.71957,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:52.6787:17:17:605:0:0:0,-5.11751,-10 0/0:70.7405:23:23:864:0:0:0,-6.92369,-10 0/0:25.586:8:8:296:0:0:0,-2.40824,-10 0/1:99:32:14:500:17:595:-10,0,-10 0/0:49.6684:16:16:568:0:0:0,-4.81648,-10 0/1:99:21:10:379:11:405:-10,0,-10 0/0:73.7508:24:24:867:0:0:0,-7.22472,-10 0/0:55.689:18:18:649:0:0:0,-5.41854,-10 0/0:52.6787:17:17:644:0:0:0,-5.11751,-10 0/0:99:41:41:1498:0:0:0,-10,-10 0/0:31.6066:10:10:372:0:0:0,-3.0103,-10 0/0:25.586:8:8:282:0:0:0,-2.40824,-10 0/0:97.8264:32:32:1183:0:0:0,-9.63296,-10 0/0:31.6066:10:10:371:0:0:0,-3.0103,-10 0/0:82.7817:27:27:1003:0:0:0,-8.12781,-10 0/0:7.52421:2:2:72:0:0:0,-0.60206,-6.84 0/0:37.6272:12:12:442:0:0:0,-3.61236,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/0:70.7405:23:23:845:0:0:0,-6.92369,-10 0/0:40.6375:13:13:487:0:0:0,-3.91339,-10 0/0:94.8225:31:31:1146:0:0:0,-9.33193,-10 0/0:55.689:18:18:657:0:0:0,-5.41854,-10 0/0:73.7508:24:24:890:0:0:0,-7.22472,-10 0/0:99:40:40:1487:0:0:0,-10,-10 0/1:99:18:5:176:13:489:-10,0,-10 0/1:99:22:13:487:9:328:-10,0,-10 0/1:99:58:28:1023:30:1110:-10,0,-10 0/1:99:38:22:816:16:608:-10,0,-10 1/1:28.3966:14:0:0:14:523:-10,-4.21442,0 0/0:99:43:43:1496:0:0:0,-10,-10 0/0:73.7508:24:24:877:0:0:0,-7.22472,-10 0/1:99:35:19:679:16:582:-10,0,-10 0/0:58.6993:19:19:688:0:0:0,-5.71957,-10 0/0:22.5757:7:7:238:0:0:0,-2.10721,-10 0/1:99:50:29:1063:21:796:-10,0,-10 0/0:61.7096:20:20:746:0:0:0,-6.0206,-10 1/1:35.0452:33:1:38:32:1172:-10,-4.61548,0 0/0:34.6169:11:11:401:0:0:0,-3.31133,-10 0/0:49.6684:16:16:581:0:0:0,-4.81648,-10 0/0:43.6478:14:14:519:0:0:0,-4.21442,-10 0/0:91.8109:30:30:1076:0:0:0,-9.0309,-10 0/0:64.7199:21:21:760:0:0:0,-6.32163,-10 0/0:99:34:34:1214:0:0:0,-10,-10 0/0:70.7405:23:23:842:0:0:0,-6.92369,-10 0/0:52.6787:17:17:614:0:0:0,-5.11751,-10 0/0:91.8109:30:30:1102:0:0:0,-9.0309,-10 0/0:55.689:18:18:631:0:0:0,-5.41854,-10 0/0:43.6478:14:14:525:0:0:0,-4.21442,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:43.6478:14:14:503:0:0:0,-4.21442,-10 0/0:58.6993:19:19:709:0:0:0,-5.71957,-10 0/0:79.7714:26:26:976:0:0:0,-7.82678,-10 0/0:91.8109:30:30:1114:0:0:0,-9.0309,-10 0/0:46.6581:15:15:569:0:0:0,-4.51545,-10 0/0:97.8264:32:32:1144:0:0:0,-9.63296,-10 0/0:52.6787:17:17:621:0:0:0,-5.11751,-10 0/0:34.6169:11:11:400:0:0:0,-3.31133,-10 0/0:52.6787:17:17:641:0:0:0,-5.11751,-10 0/0:19.5654:6:6:228:0:0:0,-1.80618,-10 0/0:55.689:18:18:604:0:0:0,-5.41854,-10 0/0:94.8225:31:31:1107:0:0:0,-9.33193,-10 0/0:94.8225:31:31:1087:0:0:0,-9.33193,-10 0/0:55.689:18:18:664:0:0:0,-5.41854,-10 0/0:88.8022:29:29:1066:0:0:0,-8.72987,-10 0/0:82.7817:27:27:997:0:0:0,-8.12781,-10 0/0:16.5551:5:5:190:0:0:0,-1.50515,-10 0/0:34.6169:11:11:389:0:0:0,-3.31133,-10 1/1:28.3966:14:0:0:14:484:-10,-4.21442,0 0/0:19.5654:6:6:228:0:0:0,-1.80618,-10 0/0:67.7302:22:22:791:0:0:0,-6.62266,-10 0/0:61.7096:20:20:751:0:0:0,-6.0206,-10 0/0:52.6787:17:17:620:0:0:0,-5.11751,-10 scaffold_101 1468970 . A G 149.495 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1360;DPB=1360;DPRA=0.877061;EPP=3.0103;EPPR=4.36205;GTI=0;LEN=1;MEANALT=1;MQM=57.125;MQMR=59.9689;NS=92;NUMALT=1;ODDS=9.84514;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=278;QR=49975;RO=1351;RPP=20.3821;RPPR=2910.67;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=660;SRP=4.55492;SRR=691;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:81.8918:15:15:539:0:0:0,-4.51545,-10 0/0:75.8712:13:13:467:0:0:0,-3.91339,-10 0/0:99:26:26:954:0:0:0,-7.82678,-10 0/0:72.8609:12:12:445:0:0:0,-3.61236,-10 0/0:66.8403:10:10:365:0:0:0,-3.0103,-10 0/0:51.7888:5:5:188:0:0:0,-1.50515,-10 0/0:96.9402:20:20:733:0:0:0,-6.0206,-10 0/0:99:29:29:1093:0:0:0,-8.72987,-10 0/0:51.7888:5:5:176:0:0:0,-1.50515,-10 0/0:42.7579:2:2:73:0:0:0,-0.60206,-6.935 0/0:66.8403:10:10:379:0:0:0,-3.0103,-10 0/0:54.7991:6:6:228:0:0:0,-1.80618,-10 0/0:99:34:34:1266:0:0:0,-10,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:87.9123:17:17:599:0:0:0,-5.11751,-10 0/0:84.9021:16:16:604:0:0:0,-4.81648,-10 0/0:81.8918:15:15:566:0:0:0,-4.51545,-10 0/0:69.8506:11:11:413:0:0:0,-3.31133,-10 0/0:75.8712:13:13:494:0:0:0,-3.91339,-10 0/0:99:29:29:1079:0:0:0,-8.72987,-10 0/0:69.8506:11:11:413:0:0:0,-3.31133,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:48.7785:4:4:152:0:0:0,-1.20412,-10 0/0:78.8815:14:14:509:0:0:0,-4.21442,-10 0/0:60.8197:8:8:279:0:0:0,-2.40824,-10 0/0:72.8609:12:12:455:0:0:0,-3.61236,-10 0/0:72.8609:12:12:454:0:0:0,-3.61236,-10 0/0:60.8197:8:8:304:0:0:0,-2.40824,-10 0/0:93.9315:19:19:700:0:0:0,-5.71957,-10 0/0:99:21:21:754:0:0:0,-6.32163,-10 0/0:54.7991:6:6:217:0:0:0,-1.80618,-10 0/0:69.8506:11:11:417:0:0:0,-3.31133,-10 0/0:69.8506:11:11:381:0:0:0,-3.31133,-10 0/0:63.83:9:9:342:0:0:0,-2.70927,-10 0/0:63.83:9:9:342:0:0:0,-2.70927,-10 0/0:54.7991:6:6:228:0:0:0,-1.80618,-10 0/0:60.8197:8:8:302:0:0:0,-2.40824,-10 0/0:90.9225:18:18:681:0:0:0,-5.41854,-10 0/0:75.8712:13:13:492:0:0:0,-3.91339,-10 0/0:69.8506:11:11:414:0:0:0,-3.31133,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:69.8506:11:11:396:0:0:0,-3.31133,-10 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:87.9123:17:17:617:0:0:0,-5.11751,-10 0/0:75.8712:13:13:490:0:0:0,-3.91339,-10 0/0:99:47:47:1737:0:0:0,-10,-10 0/0:90.9225:18:18:648:0:0:0,-5.41854,-10 0/0:63.83:9:9:298:0:0:0,-2.70927,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:69.8506:11:11:418:0:0:0,-3.31133,-10 0/0:99:28:28:1054:0:0:0,-8.42884,-10 0/0:63.83:9:9:342:0:0:0,-2.70927,-10 0/0:51.7888:5:5:190:0:0:0,-1.50515,-10 0/0:99:27:27:1010:0:0:0,-8.12781,-10 0/0:57.8094:7:7:265:0:0:0,-2.10721,-10 0/0:84.9021:16:16:608:0:0:0,-4.81648,-10 0/0:45.7682:3:3:113:0:0:0,-0.90309,-10 0/0:72.8609:12:12:379:0:0:0,-3.61236,-10 0/0:46.416:12:11:416:1:16:0,-0.933179,-10 0/0:99:23:23:865:0:0:0,-6.92369,-10 0/0:93.9315:19:19:713:0:0:0,-5.71957,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:87.9123:17:17:617:0:0:0,-5.11751,-10 0/0:51.7888:5:5:190:0:0:0,-1.50515,-10 0/0:99:27:27:1016:0:0:0,-8.12781,-10 0/0:87.9123:17:17:606:0:0:0,-5.11751,-10 0/0:60.8197:8:8:283:0:0:0,-2.40824,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:45.7682:3:3:114:0:0:0,-0.90309,-10 0/0:93.9315:19:19:673:0:0:0,-5.71957,-10 0/0:72.8609:12:12:452:0:0:0,-3.61236,-10 0/1:99:14:7:266:7:262:-10,0,-10 0/0:72.8609:13:12:432:0:0:0,-3.61236,-10 0/0:84.9021:16:16:595:0:0:0,-4.81648,-10 0/0:72.8609:12:12:446:0:0:0,-3.61236,-10 0/0:84.9021:16:16:582:0:0:0,-4.81648,-10 0/0:48.7785:4:4:152:0:0:0,-1.20412,-10 0/0:54.7991:6:6:218:0:0:0,-1.80618,-10 0/0:69.8506:11:11:396:0:0:0,-3.31133,-10 0/0:99:23:23:863:0:0:0,-6.92369,-10 0/0:93.9315:19:19:707:0:0:0,-5.71957,-10 0/0:69.8506:11:11:418:0:0:0,-3.31133,-10 0/0:99:23:23:842:0:0:0,-6.92369,-10 0/0:84.9021:16:16:608:0:0:0,-4.81648,-10 0/0:45.7682:3:3:101:0:0:0,-0.90309,-9.42667 0/0:72.8609:12:12:451:0:0:0,-3.61236,-10 0/0:51.7888:5:5:190:0:0:0,-1.50515,-10 0/0:78.8815:14:14:532:0:0:0,-4.21442,-10 0/0:75.8712:13:13:483:0:0:0,-3.91339,-10 0/0:75.8712:13:13:494:0:0:0,-3.91339,-10 0/0:81.8918:15:15:530:0:0:0,-4.51545,-10 scaffold_101 1487060 . G A 930.933 . AB=0.487179;ABP=3.06598;AC=3;AF=0.0163043;AN=184;AO=39;CIGAR=1X;DP=1724;DPB=1724;DPRA=1.35468;EPP=3.51141;EPPR=4.41537;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.984;NS=92;NUMALT=1;ODDS=1.3791;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1409;QR=61747;RO=1683;RPP=87.6977;RPPR=3485.94;RUN=1;SAF=18;SAP=3.51141;SAR=21;SRF=843;SRP=3.02191;SRR=840;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.4815:15:15:545:0:0:0,-4.51545,-10 0/0:64.5124:18:18:632:0:0:0,-5.41854,-10 0/0:82.5741:24:24:866:0:0:0,-7.22472,-10 0/0:43.4403:11:11:412:0:0:0,-3.31133,-10 0/0:55.4815:15:15:561:0:0:0,-4.51545,-10 0/0:55.4815:15:15:555:0:0:0,-4.51545,-10 0/0:99:30:30:1135:0:0:0,-9.0309,-10 0/0:99:37:37:1370:0:0:0,-10,-10 0/0:49.4609:13:13:481:0:0:0,-3.91339,-10 0/0:37.4197:9:9:333:0:0:0,-2.70927,-10 0/0:28.3888:6:6:215:0:0:0,-1.80618,-10 0/0:28.3888:6:6:228:0:0:0,-1.80618,-10 0/0:97.6231:29:29:1094:0:0:0,-8.72987,-10 0/0:94.6141:28:28:992:0:0:0,-8.42884,-10 0/0:91.6045:27:27:994:0:0:0,-8.12781,-10 0/0:91.6045:27:27:947:0:0:0,-8.12781,-10 0/0:73.5433:21:21:765:0:0:0,-6.32163,-10 0/0:34.4094:8:8:295:0:0:0,-2.40824,-10 0/0:79.5639:23:23:850:0:0:0,-6.92369,-10 0/0:99:41:41:1530:0:0:0,-10,-10 0/0:64.5124:18:18:651:0:0:0,-5.41854,-10 0/0:79.5639:23:23:830:0:0:0,-6.92369,-10 0/0:31.3991:7:7:262:0:0:0,-2.10721,-10 0/0:99:30:30:1116:0:0:0,-9.0309,-10 0/0:49.4609:13:13:474:0:0:0,-3.91339,-10 0/0:73.5433:21:21:735:0:0:0,-6.32163,-10 0/0:40.43:10:10:352:0:0:0,-3.0103,-10 0/0:52.4712:14:14:512:0:0:0,-4.21442,-10 0/0:73.5433:21:21:740:0:0:0,-6.32163,-10 0/0:99:38:38:1369:0:0:0,-10,-10 0/0:19.3579:3:3:109:0:0:0,-0.90309,-10 0/0:46.4506:12:12:415:0:0:0,-3.61236,-10 0/0:55.4815:15:15:546:0:0:0,-4.51545,-10 0/0:34.4094:8:8:294:0:0:0,-2.40824,-10 0/0:79.5639:23:23:838:0:0:0,-6.92369,-10 0/0:25.3785:5:5:187:0:0:0,-1.50515,-10 0/0:55.4815:15:15:557:0:0:0,-4.51545,-10 0/0:61.5021:18:17:639:0:0:0,-5.11751,-10 0/0:58.4918:16:16:606:0:0:0,-4.81648,-10 0/0:46.4506:12:12:454:0:0:0,-3.61236,-10 0/0:34.2956:24:23:834:1:38:0,-2.04451,-10 0/0:79.5639:23:23:828:0:0:0,-6.92369,-10 0/0:52.4712:14:14:532:0:0:0,-4.21442,-10 0/0:99:31:30:1120:0:0:0,-9.0309,-10 0/0:42.2586:19:18:683:1:16:0,-2.84082,-10 0/0:58.4918:16:16:568:0:0:0,-4.81648,-10 0/0:99:43:43:1576:0:0:0,-10,-10 0/0:61.5021:17:17:641:0:0:0,-5.11751,-10 0/0:49.4609:13:13:471:0:0:0,-3.91339,-10 0/0:91.6045:27:27:955:0:0:0,-8.12781,-10 0/0:46.4506:12:12:456:0:0:0,-3.61236,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:52.4712:14:14:530:0:0:0,-4.21442,-10 0/0:31.3991:7:7:257:0:0:0,-2.10721,-10 0/0:99:46:46:1660:0:0:0,-10,-10 0/0:46.4506:12:12:451:0:0:0,-3.61236,-10 0/0:79.5639:23:23:874:0:0:0,-6.92369,-10 0/0:25.3785:5:5:166:0:0:0,-1.50515,-10 0/0:55.4815:15:15:548:0:0:0,-4.51545,-10 0/0:58.4918:16:16:606:0:0:0,-4.81648,-10 0/0:88.5945:26:26:902:0:0:0,-7.82678,-10 0/0:55.4815:15:15:568:0:0:0,-4.51545,-10 0/1:99:39:20:760:19:676:-10,0,-10 0/0:64.5124:18:18:660:0:0:0,-5.41854,-10 1/1:7.20615:18:0:0:18:679:-10,-5.41854,0 0/0:76.5536:22:22:768:0:0:0,-6.62266,-10 0/0:58.4918:16:16:608:0:0:0,-4.81648,-10 0/0:43.4403:11:11:417:0:0:0,-3.31133,-10 0/0:99:42:42:1564:0:0:0,-10,-10 0/0:40.43:10:10:373:0:0:0,-3.0103,-10 0/0:67.5227:19:19:715:0:0:0,-5.71957,-10 0/0:99:31:31:1164:0:0:0,-9.33193,-10 0/0:82.5741:24:24:868:0:0:0,-7.22472,-10 0/0:73.5433:21:21:786:0:0:0,-6.32163,-10 0/0:70.533:20:20:748:0:0:0,-6.0206,-10 0/0:46.4506:12:12:432:0:0:0,-3.61236,-10 0/0:49.4609:13:13:470:0:0:0,-3.91339,-10 0/0:76.5536:22:22:794:0:0:0,-6.62266,-10 0/0:16.3476:2:2:75:0:0:0,-0.60206,-7.125 0/0:25.3785:5:5:189:0:0:0,-1.50515,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:97.6231:29:29:1059:0:0:0,-8.72987,-10 0/0:76.5536:22:22:784:0:0:0,-6.62266,-10 0/0:64.5124:18:18:676:0:0:0,-5.41854,-10 0/0:67.5227:19:19:682:0:0:0,-5.71957,-10 0/0:25.3785:5:5:190:0:0:0,-1.50515,-10 0/0:64.5124:18:18:684:0:0:0,-5.41854,-10 0/0:40.43:10:10:355:0:0:0,-3.0103,-10 0/0:28.3888:6:6:228:0:0:0,-1.80618,-10 0/0:61.5021:17:17:618:0:0:0,-5.11751,-10 0/0:58.4918:16:16:574:0:0:0,-4.81648,-10 0/0:58.4918:16:16:579:0:0:0,-4.81648,-10 scaffold_101 1487099 . T C 2398.89 . AB=0;ABP=0;AC=8;AF=0.0434783;AN=184;AO=91;CIGAR=1X;DP=1704;DPB=1704;DPRA=1.24117;EPP=3.03416;EPPR=3.31396;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9857;NS=92;NUMALT=1;ODDS=12.1571;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3339;QR=57976;RO=1609;RPP=200.614;RPPR=3496.91;RUN=1;SAF=45;SAP=3.03416;SAR=46;SRF=797;SRP=3.31396;SRR=812;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:88.9204:15:14:504:0:0:0,-4.21442,-10 0/0:99:18:18:658:0:0:0,-5.41854,-10 0/0:99:24:24:901:0:0:0,-7.22472,-10 0/0:79.8901:11:11:394:0:0:0,-3.31133,-10 0/0:91.93:15:15:530:0:0:0,-4.51545,-10 0/0:91.93:15:15:567:0:0:0,-4.51545,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:99:37:37:1348:0:0:0,-10,-10 0/0:85.9108:13:13:451:0:0:0,-3.91339,-10 0/0:73.8696:9:9:308:0:0:0,-2.70927,-10 0/0:64.8387:6:6:197:0:0:0,-1.80618,-10 0/0:64.8387:6:6:228:0:0:0,-1.80618,-10 0/0:99:29:29:1051:0:0:0,-8.72987,-10 0/0:99:28:28:983:0:0:0,-8.42884,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/0:99:27:27:991:0:0:0,-8.12781,-10 0/0:99:21:21:768:0:0:0,-6.32163,-10 0/0:70.8593:8:8:270:0:0:0,-2.40824,-10 0/0:99:23:23:846:0:0:0,-6.92369,-10 0/0:99:42:42:1465:0:0:0,-10,-10 0/0:99:18:18:603:0:0:0,-5.41854,-10 0/0:99:23:23:784:0:0:0,-6.92369,-10 0/0:67.849:7:7:235:0:0:0,-2.10721,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:82.9003:13:12:415:0:0:0,-3.61236,-10 0/0:99:20:20:678:0:0:0,-6.0206,-10 0/0:76.8799:10:10:335:0:0:0,-3.0103,-10 0/0:85.9108:13:13:489:0:0:0,-3.91339,-10 0/0:99:20:20:713:0:0:0,-6.0206,-10 0/0:99:37:36:1296:0:0:0,-10,-10 0/0:55.8078:3:3:107:0:0:0,-0.90309,-9.98667 0/0:82.9003:12:12:428:0:0:0,-3.61236,-10 0/0:91.93:15:15:535:0:0:0,-4.51545,-10 0/0:70.8593:8:8:303:0:0:0,-2.40824,-10 0/0:99:21:20:714:0:0:0,-6.0206,-10 0/0:61.8284:5:5:167:0:0:0,-1.50515,-10 0/0:91.93:15:15:561:0:0:0,-4.51545,-10 0/0:99:18:18:677:0:0:0,-5.41854,-10 0/0:94.939:16:16:598:0:0:0,-4.81648,-10 0/0:82.9003:12:12:425:0:0:0,-3.61236,-10 0/0:99:24:24:865:0:0:0,-7.22472,-10 0/0:99:23:23:842:0:0:0,-6.92369,-10 0/0:88.9204:14:14:521:0:0:0,-4.21442,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:99:19:19:653:0:0:0,-5.71957,-10 0/0:91.93:15:15:534:0:0:0,-4.51545,-10 0/0:99:42:42:1487:0:0:0,-10,-10 0/0:94.939:16:16:584:0:0:0,-4.81648,-10 0/0:85.9108:13:13:478:0:0:0,-3.91339,-10 0/0:99:26:26:940:0:0:0,-7.82678,-10 0/0:82.9003:12:12:442:0:0:0,-3.61236,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:88.9204:14:14:522:0:0:0,-4.21442,-10 0/0:67.849:7:7:244:0:0:0,-2.10721,-10 0/0:99:45:45:1613:0:0:0,-10,-10 0/0:82.9003:12:12:429:0:0:0,-3.61236,-10 0/0:99:22:22:802:0:0:0,-6.62266,-10 0/0:58.8181:4:4:138:0:0:0,-1.20412,-10 0/0:91.93:15:15:495:0:0:0,-4.51545,-10 0/0:94.939:16:16:581:0:0:0,-4.81648,-10 0/0:99:26:26:880:0:0:0,-7.82678,-10 0/0:91.93:15:15:562:0:0:0,-4.51545,-10 0/0:99:39:39:1475:0:0:0,-10,-10 0/0:99:18:18:675:0:0:0,-5.41854,-10 0/0:99:18:18:681:0:0:0,-5.41854,-10 0/0:99:22:22:767:0:0:0,-6.62266,-10 0/0:94.939:16:16:601:0:0:0,-4.81648,-10 0/0:79.8901:11:11:406:0:0:0,-3.31133,-10 0/0:99:42:42:1514:0:0:0,-10,-10 0/0:76.8799:10:10:344:0:0:0,-3.0103,-10 1/1:61.942:19:0:0:19:689:-10,-5.71957,0 1/1:98.06:31:0:0:31:1127:-10,-9.33193,0 0/0:99:23:23:836:0:0:0,-6.92369,-10 1/1:67.9626:21:0:0:21:771:-10,-6.32163,0 1/1:64.9523:20:0:0:20:752:-10,-6.0206,0 0/0:82.9003:12:12:448:0:0:0,-3.61236,-10 0/0:85.9108:13:13:463:0:0:0,-3.91339,-10 0/0:99:22:22:784:0:0:0,-6.62266,-10 0/0:52.7975:2:2:75:0:0:0,-0.60206,-7.125 0/0:61.8284:5:5:168:0:0:0,-1.50515,-10 0/0:99:30:30:1055:0:0:0,-9.0309,-10 0/0:99:29:29:1053:0:0:0,-8.72987,-10 0/0:99:22:22:785:0:0:0,-6.62266,-10 0/0:97.9527:17:17:634:0:0:0,-5.11751,-10 0/0:99:19:19:707:0:0:0,-5.71957,-10 0/0:61.8284:5:5:190:0:0:0,-1.50515,-10 0/0:99:18:18:675:0:0:0,-5.41854,-10 0/0:76.8799:10:10:357:0:0:0,-3.0103,-10 0/0:64.8387:6:6:227:0:0:0,-1.80618,-10 0/0:97.9527:17:17:624:0:0:0,-5.11751,-10 0/0:91.93:15:15:518:0:0:0,-4.51545,-10 0/0:91.93:15:15:546:0:0:0,-4.51545,-10 scaffold_101 1496972 . AAT A 3492.69 . AB=0.568889;ABP=12.2849;AC=13;AF=0.0706522;AN=184;AO=143;CIGAR=1M2D1M;DP=1570;DPB=1498.75;DPRA=1.32878;EPP=3.75437;EPPR=14.8525;GTI=1;LEN=2;MEANALT=1;MQM=59.6154;MQMR=59.9415;NS=92;NUMALT=1;ODDS=0.0723885;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=0;PQR=0;PRO=0.5;QA=4842;QR=51694;RO=1420;RPP=313.531;RPPR=3051.86;RUN=1;SAF=75;SAP=3.75437;SAR=68;SRF=758;SRP=17.1035;SRR=662;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:46.2568:13:13:456:0:0:0,-3.91339,-10 0|0:43.2465:12:12:452:0:0:0,-3.61236,-10 0|0:73.3495:22:22:798:0:0:0,-6.62266,-10 0|0:37.2259:10:10:349:0:0:0,-3.0103,-10 0|1:99:15:4:148:11:308:-10,0,-10 1|1:12.8159:9:0:0:9:268:-10,-2.70927,0 0|0:99:31:31:1140:0:0:0,-9.33193,-10 0|0:82.3804:25:25:929:0:0:0,-7.52575,-10 0|0:43.2465:12:12:421:0:0:0,-3.61236,-10 0|0:19.1641:4:4:136:0:0:0,-1.20412,-10 1|1:3.78505:6:0:0:6:162:-10,-1.80618,0 0|0:40.2362:11:11:402:0:0:0,-3.31133,-10 0|1:99:41:19:704:22:763:-10,0,-10 0|1:99:27:10:377:17:580:-10,0,-10 0|0:82.3804:26:25:921:0:0:0,-7.52575,-10 0|0:79.37:24:24:868:0:0:0,-7.22472,-10 0|1:99:28:15:559:13:466:-10,0,-10 0|0:34.2156:9:9:334:0:0:0,-2.70927,-10 0|1:99:32:10:377:22:764:-10,0,-10 0|0:94.4209:29:29:1077:0:0:0,-8.72987,-10 0|0:43.2465:12:12:454:0:0:0,-3.61236,-10 0|0:88.4008:28:27:976:0:0:0,-8.12781,-10 0|0:55.2877:17:16:576:0:0:0,-4.81648,-10 0|0:76.3598:23:23:847:0:0:0,-6.92369,-10 0|0:61.3083:18:18:664:0:0:0,-5.41854,-10 0|0:52.2774:15:15:549:0:0:0,-4.51545,-10 0|0:55.2877:16:16:587:0:0:0,-4.81648,-10 0|0:40.2362:11:11:413:0:0:0,-3.31133,-10 0|0:40.2362:11:11:394:0:0:0,-3.31133,-10 0|0:94.4209:29:29:1019:0:0:0,-8.72987,-10 0|0:22.1744:5:5:180:0:0:0,-1.50515,-10 0|0:31.2053:8:8:289:0:0:0,-2.40824,-10 0|0:52.2774:15:15:531:0:0:0,-4.51545,-10 0|0:34.2156:10:9:330:0:0:0,-2.70927,-10 0|0:64.3186:19:19:696:0:0:0,-5.71957,-10 0|0:25.1847:6:6:225:0:0:0,-1.80618,-10 0|0:37.2259:10:10:365:0:0:0,-3.0103,-10 0|0:76.3598:23:23:862:0:0:0,-6.92369,-10 0|0:49.2671:14:14:526:0:0:0,-4.21442,-10 0|0:55.2877:16:16:592:0:0:0,-4.81648,-10 0|0:55.2877:16:16:578:0:0:0,-4.81648,-10 0|0:52.2774:15:15:537:0:0:0,-4.51545,-10 0|0:55.2877:16:16:587:0:0:0,-4.81648,-10 0|0:88.4008:27:27:957:0:0:0,-8.12781,-10 0|0:43.2465:12:12:449:0:0:0,-3.61236,-10 0|0:85.3906:26:26:950:0:0:0,-7.82678,-10 0|0:99:36:36:1299:0:0:0,-10,-10 0|0:64.3186:20:19:683:0:0:0,-5.71957,-10 0|0:43.2465:12:12:434:0:0:0,-3.61236,-10 0|0:76.3598:23:23:847:0:0:0,-6.92369,-10 0|0:34.2156:9:9:333:0:0:0,-2.70927,-10 0|0:94.4209:29:29:1047:0:0:0,-8.72987,-10 0|0:46.2568:13:13:469:0:0:0,-3.91339,-10 0|0:28.195:7:7:254:0:0:0,-2.10721,-10 0|0:99:36:36:1321:0:0:0,-10,-10 0|0:40.2362:11:11:401:0:0:0,-3.31133,-10 0|0:40.2362:11:11:378:0:0:0,-3.31133,-10 0|0:31.2053:8:8:301:0:0:0,-2.40824,-10 0|0:34.2156:9:9:330:0:0:0,-2.70927,-10 0|0:49.2671:14:14:512:0:0:0,-4.21442,-10 0|1:99:39:18:667:21:725:-10,0,-10 0|0:46.2568:13:13:483:0:0:0,-3.91339,-10 0|0:99:33:33:1216:0:0:0,-9.93399,-10 0|1:99:13:6:213:7:261:-10,0,-10 0|0:49.2671:14:14:512:0:0:0,-4.21442,-10 0|0:73.3495:22:22:786:0:0:0,-6.62266,-10 0|0:61.3083:18:18:650:0:0:0,-5.41854,-10 0|0:28.195:7:7:253:0:0:0,-2.10721,-10 0|0:82.3804:26:25:912:0:0:0,-7.52575,-10 0|0:34.2156:9:9:316:0:0:0,-2.70927,-10 0|0:58.298:17:17:599:0:0:0,-5.11751,-10 0|0:67.3289:20:20:727:0:0:0,-6.0206,-10 0|0:64.3186:19:19:692:0:0:0,-5.71957,-10 0|0:37.2259:10:10:358:0:0:0,-3.0103,-10 0|0:88.4008:27:27:991:0:0:0,-8.12781,-10 0|0:34.2156:9:9:332:0:0:0,-2.70927,-10 0|0:34.2156:9:9:335:0:0:0,-2.70927,-10 0|0:25.1847:6:6:215:0:0:0,-1.80618,-10 0|0:22.1744:5:5:156:0:0:0,-1.50515,-10 0|0:49.2671:14:14:496:0:0:0,-4.21442,-10 0|0:99:34:34:1258:0:0:0,-10,-10 0|0:55.2877:16:16:564:0:0:0,-4.81648,-10 0|0:61.3083:18:18:654:0:0:0,-5.41854,-10 0|0:76.3598:23:23:846:0:0:0,-6.92369,-10 0|1:99:26:15:548:11:395:-10,0,-10 0|1:0.174649:4:0:0:4:150:-10,-1.20412,0 0|0:52.2774:15:15:539:0:0:0,-4.51545,-10 0|0:37.2259:10:10:370:0:0:0,-3.0103,-10 0|0:31.2053:8:8:293:0:0:0,-2.40824,-10 0|0:55.2877:17:16:540:0:0:0,-4.81648,-10 0|0:61.3083:18:18:647:0:0:0,-5.41854,-10 0|0:34.2156:9:9:336:0:0:0,-2.70927,-10 scaffold_101 1496997 . T G 3606.92 . AB=0.514286;ABP=3.19643;AC=15;AF=0.0815217;AN=184;AO=137;CIGAR=1X;DP=1572;DPB=1572;DPRA=1.00026;EPP=4.29416;EPPR=17.8414;GTI=2;LEN=1;MEANALT=1;MQM=59.9197;MQMR=59.9101;NS=92;NUMALT=1;ODDS=1.91467;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5001;QR=52473;RO=1435;RPP=300.502;RPPR=3058.57;RUN=1;SAF=73;SAP=4.29416;SAR=64;SRF=760;SRP=13.9433;SRR=675;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.01:13:13:461:0:0:0,-3.91339,-10 0/0:43.9997:12:12:451:0:0:0,-3.61236,-10 0/0:74.1027:22:22:807:0:0:0,-6.62266,-10 0/1:0.507883:10:0:0:10:349:-10,-3.0103,0 0/0:53.0306:15:15:523:0:0:0,-4.51545,-10 0/0:34.9688:9:9:332:0:0:0,-2.70927,-10 0/0:99:31:31:1110:0:0:0,-9.33193,-10 0/0:83.1335:25:25:929:0:0:0,-7.52575,-10 0/0:43.9997:12:12:390:0:0:0,-3.61236,-10 0/0:19.9173:4:4:139:0:0:0,-1.20412,-10 0/0:25.9379:6:6:201:0:0:0,-1.80618,-10 0/0:40.9894:11:11:394:0:0:0,-3.31133,-10 0/0:99:41:41:1512:0:0:0,-10,-10 0/0:89.1539:27:27:988:0:0:0,-8.12781,-10 0/0:86.1437:26:26:931:0:0:0,-7.82678,-10 0/0:80.1232:24:24:879:0:0:0,-7.22472,-10 0/0:92.164:28:28:1058:0:0:0,-8.42884,-10 0/0:34.9688:9:9:338:0:0:0,-2.70927,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:95.1738:29:29:1062:0:0:0,-8.72987,-10 0/1:99:12:6:228:6:228:-10,0,-10 0/0:92.164:28:28:1017:0:0:0,-8.42884,-10 0/0:59.0512:17:17:627:0:0:0,-5.11751,-10 0/0:74.1027:22:22:830:0:0:0,-6.62266,-10 0/0:65.0718:19:19:722:0:0:0,-5.71957,-10 0/0:53.0306:15:15:513:0:0:0,-4.51545,-10 0/0:56.0409:16:16:576:0:0:0,-4.81648,-10 0/0:40.9894:11:11:413:0:0:0,-3.31133,-10 0/0:40.9894:11:11:416:0:0:0,-3.31133,-10 0/0:92.164:28:28:1000:0:0:0,-8.42884,-10 0/0:22.9276:5:5:165:0:0:0,-1.50515,-10 0/0:31.9585:8:8:290:0:0:0,-2.40824,-10 0/0:53.0306:15:15:546:0:0:0,-4.51545,-10 0/0:37.9791:10:10:376:0:0:0,-3.0103,-10 1/1:26.3062:19:0:0:19:693:-10,-5.71957,0 0/0:25.9379:6:6:228:0:0:0,-1.80618,-10 0/0:37.9791:10:10:374:0:0:0,-3.0103,-10 0/1:99:23:11:409:12:432:-10,0,-10 0/0:50.0203:14:14:530:0:0:0,-4.21442,-10 0/1:99:16:10:371:6:217:-10,0,-10 0/0:56.0409:16:16:576:0:0:0,-4.81648,-10 0/0:53.0306:15:15:546:0:0:0,-4.51545,-10 1/1:17.2753:16:0:0:16:577:-10,-4.81648,0 0/0:89.1539:27:27:957:0:0:0,-8.12781,-10 0/0:43.9997:12:12:452:0:0:0,-3.61236,-10 0/0:89.1539:27:27:989:0:0:0,-8.12781,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:68.0821:20:20:706:0:0:0,-6.0206,-10 0/0:43.9997:12:12:454:0:0:0,-3.61236,-10 0/0:77.1129:23:23:839:0:0:0,-6.92369,-10 0/0:34.9688:9:9:338:0:0:0,-2.70927,-10 0/0:95.1738:29:29:1074:0:0:0,-8.72987,-10 0/0:47.01:13:13:446:0:0:0,-3.91339,-10 0/0:28.9482:7:7:260:0:0:0,-2.10721,-10 0/0:99:36:36:1342:0:0:0,-10,-10 0/0:40.9894:11:11:411:0:0:0,-3.31133,-10 0/0:47.01:13:13:455:0:0:0,-3.91339,-10 0/0:31.9585:8:8:302:0:0:0,-2.40824,-10 0/0:34.9688:9:9:341:0:0:0,-2.70927,-10 0/0:50.0203:14:14:496:0:0:0,-4.21442,-10 0/0:99:39:39:1455:0:0:0,-10,-10 0/0:47.01:13:13:491:0:0:0,-3.91339,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:47.01:13:13:490:0:0:0,-3.91339,-10 0/0:50.0203:14:14:521:0:0:0,-4.21442,-10 0/0:74.1027:22:22:794:0:0:0,-6.62266,-10 0/0:62.0615:18:18:673:0:0:0,-5.41854,-10 0/0:28.9482:7:7:264:0:0:0,-2.10721,-10 0/0:86.1437:26:26:961:0:0:0,-7.82678,-10 0/0:34.9688:9:9:330:0:0:0,-2.70927,-10 0/0:59.0512:17:17:613:0:0:0,-5.11751,-10 0/0:68.0821:20:20:734:0:0:0,-6.0206,-10 0/0:68.0821:20:20:746:0:0:0,-6.0206,-10 0/0:37.9791:10:10:356:0:0:0,-3.0103,-10 0/0:89.1539:27:27:995:0:0:0,-8.12781,-10 0/0:34.9688:9:9:338:0:0:0,-2.70927,-10 0/0:34.9688:9:9:316:0:0:0,-2.70927,-10 0/0:25.9379:6:6:228:0:0:0,-1.80618,-10 0/1:0.0150043:5:0:0:5:177:-10,-1.50515,0 1/1:11.2547:14:0:0:14:502:-10,-4.21442,0 1/1:71.4607:34:0:0:34:1259:-10,-10,0 0/1:71.6465:16:13:468:3:113:-8.47837,0,-10 0/0:62.0615:18:18:643:0:0:0,-5.41854,-10 0/1:99:23:11:414:12:454:-10,0,-10 0/0:83.1335:25:25:944:0:0:0,-7.52575,-10 0/0:19.9173:4:4:127:0:0:0,-1.20412,-10 0/0:53.0306:15:15:497:0:0:0,-4.51545,-10 0/0:37.9791:10:10:367:0:0:0,-3.0103,-10 0/0:31.9585:8:8:297:0:0:0,-2.40824,-10 0/0:59.0512:17:17:608:0:0:0,-5.11751,-10 0/0:62.0615:18:18:622:0:0:0,-5.41854,-10 0/0:34.9688:9:9:336:0:0:0,-2.70927,-10 scaffold_101 1693472 . G A 71.5677 . AB=0.3125;ABP=7.89611;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1X;DP=1739;DPB=1739;DPRA=1.11373;EPP=8.80089;EPPR=12.4944;GTI=0;LEN=1;MEANALT=1;MQM=59;MQMR=59.9648;NS=92;NUMALT=1;ODDS=12.6314;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=222;QR=63110;RO=1733;RPP=16.0391;RPPR=3766.17;RUN=1;SAF=5;SAP=8.80089;SAR=1;SRF=910;SRP=12.4944;SRR=823;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:20:20:746:0:0:0,-6.0206,-10 0/0:81.9504:10:10:374:0:0:0,-3.0103,-10 0/0:99:20:20:724:0:0:0,-6.0206,-10 0/0:87.9704:12:12:432:0:0:0,-3.61236,-10 0/0:96.9975:15:15:542:0:0:0,-4.51545,-10 0/0:81.9504:10:10:378:0:0:0,-3.0103,-10 0/0:99:27:27:1010:0:0:0,-8.12781,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:84.9604:11:11:413:0:0:0,-3.31133,-10 0/0:60.8783:3:3:114:0:0:0,-0.90309,-10 0/0:78.94:9:9:342:0:0:0,-2.70927,-10 0/0:63.8886:4:4:147:0:0:0,-1.20412,-10 0/0:99:29:29:1071:0:0:0,-8.72987,-10 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:81.429:26:25:921:1:37:0,-2.71181,-10 0/0:99:26:26:916:0:0:0,-7.82678,-10 0/0:99:36:36:1347:0:0:0,-10,-10 0/0:72.9195:7:7:234:0:0:0,-2.10721,-10 0/0:99:27:27:1009:0:0:0,-8.12781,-10 0/0:99:30:30:1084:0:0:0,-9.0309,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:96.9975:15:15:526:0:0:0,-4.51545,-10 0/0:99:22:22:811:0:0:0,-6.62266,-10 0/0:99:23:23:819:0:0:0,-6.92369,-10 0/0:99:19:19:706:0:0:0,-5.71957,-10 0/0:99:18:18:655:0:0:0,-5.41854,-10 0/0:84.9604:11:11:405:0:0:0,-3.31133,-10 0/0:99:19:19:703:0:0:0,-5.71957,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:72.9195:7:7:265:0:0:0,-2.10721,-10 0/0:54.8577:1:1:38:0:0:0,-0.30103,-3.8 0/0:99:21:21:722:0:0:0,-6.32163,-10 0/0:72.9195:7:7:266:0:0:0,-2.10721,-10 0/0:96.9975:15:15:567:0:0:0,-4.51545,-10 0/0:81.9504:10:10:358:0:0:0,-3.0103,-10 0/0:72.9195:7:7:260:0:0:0,-2.10721,-10 0/0:99:29:29:1048:0:0:0,-8.72987,-10 0/0:84.9604:11:11:409:0:0:0,-3.31133,-10 0/0:99:16:16:596:0:0:0,-4.81648,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:81.9504:10:10:374:0:0:0,-3.0103,-10 0/0:84.9604:11:11:404:0:0:0,-3.31133,-10 0/0:99:27:27:991:0:0:0,-8.12781,-10 0/0:99:26:26:960:0:0:0,-7.82678,-10 0/0:96.9975:15:15:541:0:0:0,-4.51545,-10 0/0:99:39:39:1444:0:0:0,-10,-10 0/0:99:29:29:1080:0:0:0,-8.72987,-10 0/0:81.9504:10:10:371:0:0:0,-3.0103,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:84.9604:11:11:387:0:0:0,-3.31133,-10 0/0:99:29:29:1012:0:0:0,-8.72987,-10 0/0:87.9704:12:12:433:0:0:0,-3.61236,-10 0/0:72.9195:7:7:264:0:0:0,-2.10721,-10 0/0:99:40:40:1467:0:0:0,-10,-10 0/0:78.94:9:9:315:0:0:0,-2.70927,-10 0/0:99:24:24:887:0:0:0,-7.22472,-10 0/0:93.9894:14:14:449:0:0:0,-4.21442,-10 0/0:93.9894:14:14:508:0:0:0,-4.21442,-10 0/0:84.9604:11:11:401:0:0:0,-3.31133,-10 0/0:99:29:29:1043:0:0:0,-8.72987,-10 0/0:99:24:24:846:0:0:0,-7.22472,-10 0/0:99:23:23:866:0:0:0,-6.92369,-10 0/0:87.9704:12:12:448:0:0:0,-3.61236,-10 0/0:99:19:19:685:0:0:0,-5.71957,-10 0/0:99:34:34:1221:0:0:0,-10,-10 0/0:99:24:24:791:0:0:0,-7.22472,-10 0/0:84.9604:11:11:410:0:0:0,-3.31133,-10 0/0:99:28:28:1010:0:0:0,-8.42884,-10 0/0:84.9604:11:11:417:0:0:0,-3.31133,-10 0/0:99:16:16:606:0:0:0,-4.81648,-10 0/0:99:32:32:1153:0:0:0,-9.63296,-10 0/1:71.5677:16:11:418:5:185:-10,0,-10 0/0:99:17:17:635:0:0:0,-5.11751,-10 0/0:99:26:26:942:0:0:0,-7.82678,-10 0/0:81.9504:10:10:356:0:0:0,-3.0103,-10 0/0:99:23:23:817:0:0:0,-6.92369,-10 0/0:78.94:9:9:314:0:0:0,-2.70927,-10 0/0:60.8783:3:3:91:0:0:0,-0.90309,-8.49333 0/0:87.9704:12:12:408:0:0:0,-3.61236,-10 0/0:99:30:30:1136:0:0:0,-9.0309,-10 0/0:99:33:33:1192:0:0:0,-9.93399,-10 0/0:99:22:22:805:0:0:0,-6.62266,-10 0/0:99:23:23:845:0:0:0,-6.92369,-10 0/0:99:18:18:606:0:0:0,-5.41854,-10 0/0:99:19:19:702:0:0:0,-5.71957,-10 0/0:99:21:21:762:0:0:0,-6.32163,-10 0/0:87.9704:12:12:408:0:0:0,-3.61236,-10 0/0:60.8783:3:3:88:0:0:0,-0.90309,-8.21333 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:99:18:18:648:0:0:0,-5.41854,-10 0/0:93.9894:14:14:524:0:0:0,-4.21442,-10 scaffold_101 1816859 . C T 2053.13 . AB=0.605634;ABP=9.89173;AC=6;AF=0.0326087;AN=184;AO=77;CIGAR=1X;DP=2179;DPB=2179;DPRA=1.11379;EPP=3.0385;EPPR=7.64987;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.981;NS=92;NUMALT=1;ODDS=0.122799;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2842;QR=76544;RO=2101;RPP=170.214;RPPR=4547.92;RUN=1;SAF=39;SAP=3.0385;SAR=38;SRF=1015;SRP=8.22039;SRR=1086;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:76.2351:21:21:749:0:0:0,-6.32163,-10 0/0:43.1218:10:10:341:0:0:0,-3.0103,-10 0/0:70.2145:19:19:662:0:0:0,-5.71957,-10 0/0:61.1836:16:16:594:0:0:0,-4.81648,-10 0/0:55.163:14:14:516:0:0:0,-4.21442,-10 0/0:37.1012:8:8:297:0:0:0,-2.40824,-10 0/0:99:43:43:1556:0:0:0,-10,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:82.2556:23:23:826:0:0:0,-6.92369,-10 0/0:22.0497:3:3:113:0:0:0,-0.90309,-10 0/0:25.06:4:4:139:0:0:0,-1.20412,-10 0/0:25.06:4:4:127:0:0:0,-1.20412,-10 0/0:99:47:47:1734:0:0:0,-10,-10 0/0:99:44:44:1620:0:0:0,-10,-10 0/0:99:29:29:1018:0:0:0,-8.72987,-10 0/0:64.1939:17:17:610:0:0:0,-5.11751,-10 0/0:73.2248:20:20:705:0:0:0,-6.0206,-10 0/0:64.1939:17:17:611:0:0:0,-5.11751,-10 0/0:94.296:27:27:1007:0:0:0,-8.12781,-10 0/0:99:49:49:1782:0:0:0,-10,-10 0/0:88.2761:25:25:935:0:0:0,-7.52575,-10 0/0:99:46:46:1686:0:0:0,-10,-10 0/0:37.1012:8:8:298:0:0:0,-2.40824,-10 0/0:99:36:36:1322:0:0:0,-10,-10 0/0:99:32:32:1136:0:0:0,-9.63296,-10 0/0:79.2454:22:22:824:0:0:0,-6.62266,-10 0/0:70.2145:19:19:698:0:0:0,-5.71957,-10 0/0:58.1733:15:15:543:0:0:0,-4.51545,-10 0/0:85.2659:24:24:872:0:0:0,-7.22472,-10 0/0:99:49:49:1812:0:0:0,-10,-10 0/0:43.1218:10:10:356:0:0:0,-3.0103,-10 0/0:52.1527:13:13:467:0:0:0,-3.91339,-10 0/0:79.2454:22:22:810:0:0:0,-6.62266,-10 0/0:34.0909:7:7:255:0:0:0,-2.10721,-10 0/0:73.2248:20:20:730:0:0:0,-6.0206,-10 0/0:28.0703:5:5:185:0:0:0,-1.50515,-10 0/0:34.0909:7:7:233:0:0:0,-2.10721,-10 0/0:85.2659:24:24:897:0:0:0,-7.22472,-10 0/0:70.2145:19:19:692:0:0:0,-5.71957,-10 0/0:43.1218:10:10:346:0:0:0,-3.0103,-10 0/0:99:44:44:1624:0:0:0,-10,-10 0/0:99:30:30:1099:0:0:0,-9.0309,-10 0/0:88.2761:25:25:888:0:0:0,-7.52575,-10 0/0:99:43:43:1568:0:0:0,-10,-10 0/0:99:34:34:1204:0:0:0,-10,-10 0/0:85.2659:24:24:863:0:0:0,-7.22472,-10 0/0:99:50:50:1820:0:0:0,-10,-10 0/0:91.2861:26:26:957:0:0:0,-7.82678,-10 0/0:52.1527:13:13:488:0:0:0,-3.91339,-10 0/0:99:39:39:1392:0:0:0,-10,-10 0/0:43.1218:10:10:377:0:0:0,-3.0103,-10 0/0:99:53:53:1880:0:0:0,-10,-10 0/0:76.2351:21:21:780:0:0:0,-6.32163,-10 0/0:43.1218:10:10:368:0:0:0,-3.0103,-10 0/0:99:61:61:2216:0:0:0,-10,-10 0/0:76.2351:21:21:786:0:0:0,-6.32163,-10 0/0:99:33:33:1193:0:0:0,-9.93399,-10 0/0:22.0497:3:3:112:0:0:0,-0.90309,-10 0/0:70.2145:19:19:646:0:0:0,-5.71957,-10 0/0:58.1733:15:15:538:0:0:0,-4.51545,-10 0/0:99:42:42:1571:0:0:0,-10,-10 0/0:79.2454:22:22:815:0:0:0,-6.62266,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:88.2761:25:25:865:0:0:0,-7.52575,-10 0/0:64.1939:17:17:626:0:0:0,-5.11751,-10 0/0:99:31:31:1150:0:0:0,-9.33193,-10 0/0:73.2248:20:20:733:0:0:0,-6.0206,-10 0/0:37.1012:8:8:302:0:0:0,-2.40824,-10 0/0:99:40:40:1498:0:0:0,-10,-10 0/0:49.1424:12:12:444:0:0:0,-3.61236,-10 1/1:9.88907:18:0:0:18:644:-10,-5.41854,0 0/1:99:41:18:648:23:853:-10,0,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 1/1:3.86847:16:0:0:16:595:-10,-4.81648,0 0/1:99:30:10:371:20:750:-10,0,-10 0/0:67.2042:18:18:673:0:0:0,-5.41854,-10 0/0:49.1424:12:12:419:0:0:0,-3.61236,-10 0/0:73.2248:20:20:745:0:0:0,-6.0206,-10 0/0:34.0909:7:7:265:0:0:0,-2.10721,-10 0/0:58.1733:15:15:544:0:0:0,-4.51545,-10 0/0:99:46:46:1662:0:0:0,-10,-10 0/0:99:48:48:1765:0:0:0,-10,-10 0/0:94.296:28:27:971:0:0:0,-8.12781,-10 0/0:99:34:34:1256:0:0:0,-10,-10 0/0:99:29:29:1096:0:0:0,-8.72987,-10 0/0:34.0909:7:7:242:0:0:0,-2.10721,-10 0/0:73.2248:20:20:743:0:0:0,-6.0206,-10 0/0:61.1836:16:16:592:0:0:0,-4.81648,-10 0/0:34.0909:7:7:265:0:0:0,-2.10721,-10 0/0:67.2042:18:18:646:0:0:0,-5.41854,-10 0/0:61.1836:16:16:544:0:0:0,-4.81648,-10 0/0:61.1836:16:16:599:0:0:0,-4.81648,-10 scaffold_101 1948928 . TCACA T 757.116 . AB=0.566667;ABP=5.32654;AC=4;AF=0.0217391;AN=184;AO=34;CIGAR=1M4D3M;DP=1258;DPB=1244.12;DPRA=1.10184;EPP=9.39698;EPPR=5.21416;GTI=1;LEN=4;MEANALT=1.5;MQM=60;MQMR=59.9992;NS=92;NUMALT=1;ODDS=5.756;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=18.5;PQR=155.5;PRO=4.5;QA=1181;QR=43944;RO=1207;RPP=76.8404;RPPR=2623.98;RUN=1;SAF=22;SAP=9.39698;SAR=12;SRF=586;SRP=5.21416;SRR=621;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:34.0996:6:6:222:0:0:0,-1.80618,-10 0|0:52.1614:12:12:431:0:0:0,-3.61236,-10 0|0:52.1614:12:12:432:0:0:0,-3.61236,-10 0|0:55.1717:13:13:477:0:0:0,-3.91339,-10 0|0:43.1305:9:9:332:0:0:0,-2.70927,-10 0|0:34.0996:6:6:208:0:0:0,-1.80618,-10 0|0:94.3056:26:26:942:0:0:0,-7.82678,-10 0|0:64.2026:16:16:590:0:0:0,-4.81648,-10 0|0:61.1923:15:15:545:0:0:0,-4.51545,-10 0|0:31.0893:5:5:175:0:0:0,-1.50515,-10 0|0:37.1099:7:7:260:0:0:0,-2.10721,-10 0|0:37.1099:7:7:258:0:0:0,-2.10721,-10 0|1:99:23:14:522:8:276:-10,0,-10 0|0:82.2643:23:22:784:0:0:0,-6.62266,-10 0|0:79.254:21:21:765:0:0:0,-6.32163,-10 0|1:99:15:6:218:8:260:-10,0,-10 0|0:67.2129:17:17:623:0:0:0,-5.11751,-10 0|1:0.00240217:8:0:0:8:293:-10,-2.40824,0 0|1:99:14:4:142:10:352:-10,0,-10 0|0:70.2232:18:18:651:0:0:0,-5.41854,-10 0|0:28.079:4:4:146:0:0:0,-1.20412,-10 0|0:88.285:24:24:864:0:0:0,-7.22472,-10 0|0:40.1202:9:8:290:0:0:0,-2.40824,-10 0|0:76.2437:20:20:734:0:0:0,-6.0206,-10 0|0:67.2129:17:17:609:0:0:0,-5.11751,-10 0|0:67.2129:17:17:606:0:0:0,-5.11751,-10 0|0:43.1305:9:9:333:0:0:0,-2.70927,-10 0|0:31.0893:7:5:183:0:0:0,-1.50515,-10 0|0:61.1923:15:15:560:0:0:0,-4.51545,-10 0|0:76.2437:20:20:715:0:0:0,-6.0206,-10 0|0:28.079:4:4:149:0:0:0,-1.20412,-10 0|0:31.0893:5:5:181:0:0:0,-1.50515,-10 0|0:49.1511:11:11:396:0:0:0,-3.31133,-10 0|0:52.1614:12:12:440:0:0:0,-3.61236,-10 0|0:58.182:14:14:517:0:0:0,-4.21442,-10 0|0:55.1717:13:13:471:0:0:0,-3.91339,-10 0|0:40.1202:8:8:290:0:0:0,-2.40824,-10 0|0:67.2129:17:17:614:0:0:0,-5.11751,-10 0|0:49.1511:12:11:408:0:0:0,-3.31133,-10 0|0:67.2129:17:17:625:0:0:0,-5.11751,-10 0|0:49.1511:12:11:413:0:0:0,-3.31133,-10 0|0:40.1202:8:8:293:0:0:0,-2.40824,-10 0|0:37.1099:7:7:253:0:0:0,-2.10721,-10 0|0:99:28:28:1016:0:0:0,-8.42884,-10 0|0:97.3159:27:27:998:0:0:0,-8.12781,-10 0|0:43.1305:9:9:328:0:0:0,-2.70927,-10 0|0:99:40:40:1426:0:0:0,-10,-10 0|0:67.2129:17:17:621:0:0:0,-5.11751,-10 0|0:34.0996:6:6:202:0:0:0,-1.80618,-10 0|0:67.2129:17:17:580:0:0:0,-5.11751,-10 0|0:40.1202:8:8:299:0:0:0,-2.40824,-10 0|0:97.3159:27:27:976:0:0:0,-8.12781,-10 0|0:49.1511:11:11:405:0:0:0,-3.31133,-10 0|0:25.0687:3:3:113:0:0:0,-0.90309,-10 0|0:97.3159:27:27:983:0:0:0,-8.12781,-10 0|0:34.0996:6:6:223:0:0:0,-1.80618,-10 0|0:52.1614:12:12:436:0:0:0,-3.61236,-10 0|0:28.079:4:4:152:0:0:0,-1.20412,-10 0|0:64.2026:16:16:587:0:0:0,-4.81648,-10 0|0:46.1408:10:10:372:0:0:0,-3.0103,-10 0|0:58.182:14:14:520:0:0:0,-4.21442,-10 0|0:43.1305:9:9:327:0:0:0,-2.70927,-10 0|0:61.1923:16:15:544:0:0:0,-4.51545,-10 0|0:64.2026:16:16:584:0:0:0,-4.81648,-10 0|0:31.0893:5:5:189:0:0:0,-1.50515,-10 0|0:82.2643:23:22:812:0:0:0,-6.62266,-10 0|0:43.1305:10:9:325:0:0:0,-2.70927,-10 0|0:55.1717:13:13:466:0:0:0,-3.91339,-10 0|0:94.3056:26:26:944:0:0:0,-7.82678,-10 0|0:43.1305:9:9:312:0:0:0,-2.70927,-10 0|0:37.1099:8:7:261:0:0:0,-2.10721,-10 0|0:73.2335:20:19:678:0:0:0,-5.71957,-10 0|0:64.2026:17:16:587:0:0:0,-4.81648,-10 0|0:61.1923:15:15:554:0:0:0,-4.51545,-10 0|0:64.2026:16:16:594:0:0:0,-4.81648,-10 0|0:58.182:14:14:514:0:0:0,-4.21442,-10 0|0:52.1614:12:12:451:0:0:0,-3.61236,-10 0|0:49.1511:11:11:403:0:0:0,-3.31133,-10 0|0:40.1202:8:8:299:0:0:0,-2.40824,-10 0|0:34.0996:6:6:214:0:0:0,-1.80618,-10 0|0:94.3056:26:26:936:0:0:0,-7.82678,-10 0|0:97.3159:27:27:981:0:0:0,-8.12781,-10 0|0:58.182:14:14:516:0:0:0,-4.21442,-10 0|0:76.2437:20:20:728:0:0:0,-6.0206,-10 0|0:55.1717:13:13:487:0:0:0,-3.91339,-10 0|0:34.0996:7:6:223:0:0:0,-1.80618,-10 0|0:46.1408:10:10:363:0:0:0,-3.0103,-10 0|0:43.1305:9:9:325:0:0:0,-2.70927,-10 0|0:52.1614:12:12:444:0:0:0,-3.61236,-10 0|0:58.182:15:14:500:0:0:0,-4.21442,-10 0|0:34.0996:6:6:219:0:0:0,-1.80618,-10 0|0:37.1099:8:7:260:0:0:0,-2.10721,-10 scaffold_101 1991715 . A G 8589.53 . AB=0.515571;ABP=3.61891;AC=29;AF=0.157609;AN=184;AO=319;CIGAR=1X;DP=1971;DPB=1971;DPRA=1.05278;EPP=3.56168;EPPR=4.53165;GTI=3;LEN=1;MEANALT=1;MQM=59.9812;MQMR=59.9412;NS=92;NUMALT=1;ODDS=0.127211;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11530;QR=59904;RO=1650;RPP=695.71;RPPR=3585.94;RUN=1;SAF=164;SAP=3.56168;SAR=155;SRF=842;SRP=4.53165;SRR=808;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.4987:11:11:417:0:0:0,-3.31133,-10 0/0:34.4781:9:9:337:0:0:0,-2.70927,-10 0/0:67.5914:20:20:747:0:0:0,-6.0206,-10 0/0:28.4575:7:7:237:0:0:0,-2.10721,-10 1/1:17.8308:13:0:0:13:463:-10,-3.91339,0 0/1:0.15924:7:0:0:7:264:-10,-2.10721,0 0/0:99:47:47:1732:0:0:0,-10,-10 0/1:99:22:6:223:16:591:-10,0,-10 0/0:64.5811:19:19:689:0:0:0,-5.71957,-10 0/0:25.4472:6:6:225:0:0:0,-1.80618,-10 1/1:8.79987:10:0:0:10:355:-10,-3.0103,0 0/0:34.4781:9:9:333:0:0:0,-2.70927,-10 0/1:99:47:28:1010:19:692:-10,0,-10 0/1:99:43:26:943:17:631:-10,0,-10 0/0:99:31:31:1101:0:0:0,-9.33193,-10 0/1:99:34:17:628:17:589:-10,0,-10 0/1:99:30:14:500:16:570:-10,0,-10 1/1:5.78957:9:0:0:9:329:-10,-2.70927,0 0/1:99:26:19:719:7:266:-10,0,-10 0/0:99:39:39:1362:0:0:0,-10,-10 0/0:55.5502:16:16:558:0:0:0,-4.81648,-10 0/0:99:41:41:1502:0:0:0,-10,-10 0/0:43.509:12:12:415:0:0:0,-3.61236,-10 0/0:55.5502:16:16:588:0:0:0,-4.81648,-10 0/0:82.6429:25:25:930:0:0:0,-7.52575,-10 0/0:91.6734:28:28:1033:0:0:0,-8.42884,-10 0/0:73.612:22:22:798:0:0:0,-6.62266,-10 0/0:34.4781:9:9:331:0:0:0,-2.70927,-10 0/0:73.612:22:22:805:0:0:0,-6.62266,-10 0/0:99:37:37:1381:0:0:0,-10,-10 0/0:28.4575:7:7:257:0:0:0,-2.10721,-10 0/0:28.4575:7:7:262:0:0:0,-2.10721,-10 0/0:52.5399:16:15:547:0:0:0,-4.51545,-10 0/0:52.5399:15:15:556:0:0:0,-4.51545,-10 0/0:10.9091:17:16:600:1:38:0,-0.087061,-10 0/0:25.4472:6:6:223:0:0:0,-1.80618,-10 0/0:70.6017:21:21:697:0:0:0,-6.32163,-10 0/0:99:37:37:1303:0:0:0,-10,-10 0/0:61.5708:18:18:648:0:0:0,-5.41854,-10 0/0:13.6712:18:17:599:1:38:0,-0.363267,-10 0/0:97.6927:30:30:1099:0:0:0,-9.0309,-10 0/0:73.612:22:22:796:0:0:0,-6.62266,-10 0/0:61.5708:18:18:632:0:0:0,-5.41854,-10 0/0:97.6927:30:30:1107:0:0:0,-9.0309,-10 0/0:99:32:32:1157:0:0:0,-9.63296,-10 0/0:58.5605:17:17:608:0:0:0,-5.11751,-10 0/0:99:48:48:1697:0:0:0,-10,-10 0/0:76.6223:23:23:864:0:0:0,-6.92369,-10 0/0:40.4987:11:11:388:0:0:0,-3.31133,-10 0/0:99:49:49:1785:0:0:0,-10,-10 0/0:52.5399:15:15:559:0:0:0,-4.51545,-10 0/0:99:37:37:1332:0:0:0,-10,-10 0/0:49.5296:14:14:490:0:0:0,-4.21442,-10 0/0:25.4472:6:6:215:0:0:0,-1.80618,-10 0/0:99:39:39:1426:0:0:0,-10,-10 0/0:52.5399:15:15:515:0:0:0,-4.51545,-10 0/0:76.6223:23:23:827:0:0:0,-6.92369,-10 0/0:34.4781:9:9:337:0:0:0,-2.70927,-10 0/0:55.5502:16:16:580:0:0:0,-4.81648,-10 0/0:37.4884:10:10:380:0:0:0,-3.0103,-10 1/1:99:42:0:0:42:1538:-10,-10,0 0/0:67.5914:20:20:745:0:0:0,-6.0206,-10 0/0:99:42:42:1509:0:0:0,-10,-10 0/1:0.00287244:17:1:38:16:564:-10,-0.087061,0 0/0:58.5605:17:17:605:0:0:0,-5.11751,-10 0/0:82.6429:25:25:893:0:0:0,-7.52575,-10 0/0:58.5605:17:17:616:0:0:0,-5.11751,-10 1/1:47.9338:23:0:0:23:808:-10,-6.92369,0 0/1:99:38:18:626:20:729:-10,0,-10 1/1:23.8514:15:0:0:15:558:-10,-4.51545,0 0/0:46.5193:14:13:467:0:0:0,-3.91339,-10 0/0:97.6927:30:30:1105:0:0:0,-9.0309,-10 0/0:61.5708:18:18:670:0:0:0,-5.41854,-10 0/0:70.6017:21:21:793:0:0:0,-6.32163,-10 0/0:99:37:37:1396:0:0:0,-10,-10 1/1:11.8102:11:0:0:11:416:-10,-3.31133,0 0/0:79.6326:24:24:880:0:0:0,-7.22472,-10 0/0:49.5296:14:14:500:0:0:0,-4.21442,-10 0/0:16.4163:3:3:114:0:0:0,-0.90309,-10 0/0:40.4987:11:11:418:0:0:0,-3.31133,-10 0/0:99:32:32:1197:0:0:0,-9.63296,-10 0/0:85.6531:26:26:941:0:0:0,-7.82678,-10 0/0:82.6429:25:25:885:0:0:0,-7.52575,-10 0/0:79.6326:24:24:859:0:0:0,-7.22472,-10 1/1:62.9853:28:0:0:28:998:-10,-8.42884,0 0/1:0.039266:5:0:0:5:146:-10,-1.50515,0 0/0:61.5708:18:18:639:0:0:0,-5.41854,-10 0/0:61.5708:18:18:644:0:0:0,-5.41854,-10 0/0:25.4472:6:6:228:0:0:0,-1.80618,-10 0/1:99:20:11:371:9:317:-10,0,-10 0/0:22.0326:21:20:735:1:38:0,-1.19941,-10 1/1:26.8617:16:0:0:16:592:-10,-4.81648,0 scaffold_101 1991719 . G C 5517.55 . AB=0.802469;ABP=67.377;AC=19;AF=0.103261;AN=184;AO=208;CIGAR=1X;DP=1974;DPB=1974;DPRA=0.799454;EPP=3.05206;EPPR=5.62397;GTI=6;LEN=1;MEANALT=1.13333;MQM=60;MQMR=59.959;NS=92;NUMALT=1;ODDS=1.6712;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7566;QR=61906;RO=1758;RPP=454.677;RPPR=3820.46;RUN=1;SAF=103;SAP=3.05206;SAR=105;SRF=902;SRP=5.62397;SRR=856;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:39.4918:11:11:407:0:0:0,-3.31133,-10 0/1:0.134978:9:0:0:9:341:-10,-2.70927,0 1/1:27.1666:20:0:0:20:742:-10,-6.0206,0 0/1:0.0333533:7:0:0:7:261:-10,-2.10721,0 0/0:45.5124:13:13:457:0:0:0,-3.91339,-10 0/0:27.4506:7:7:254:0:0:0,-2.10721,-10 0/0:99:47:47:1662:0:0:0,-10,-10 0/0:72.6051:22:22:783:0:0:0,-6.62266,-10 0/0:15.6273:19:17:582:1:38:0,-0.633267,-10 0/0:24.4403:6:6:202:0:0:0,-1.80618,-10 0/0:36.4815:10:10:373:0:0:0,-3.0103,-10 0/0:33.4712:9:9:333:0:0:0,-2.70927,-10 0/0:99:47:47:1620:0:0:0,-10,-10 0/0:99:43:43:1504:0:0:0,-10,-10 0/0:99:31:31:1071:0:0:0,-9.33193,-10 0/0:99:34:33:1180:0:0:0,-9.93399,-10 0/0:96.6881:30:30:1071:0:0:0,-9.0309,-10 0/0:33.4712:9:9:332:0:0:0,-2.70927,-10 0/0:87.6567:27:27:972:0:0:0,-8.12781,-10 0/0:99:39:39:1341:0:0:0,-10,-10 0/0:54.5433:16:16:570:0:0:0,-4.81648,-10 0/0:99:41:41:1459:0:0:0,-10,-10 0/0:39.4918:12:11:391:0:0:0,-3.31133,-10 0/0:54.5433:16:16:571:0:0:0,-4.81648,-10 0/0:81.636:25:25:833:0:0:0,-7.52575,-10 0/0:90.6671:28:28:985:0:0:0,-8.42884,-10 0/0:72.6051:22:22:747:0:0:0,-6.62266,-10 0/0:33.4712:9:9:313:0:0:0,-2.70927,-10 0/0:72.6051:22:22:781:0:0:0,-6.62266,-10 0/0:99:37:37:1320:0:0:0,-10,-10 0/0:27.4506:7:7:260:0:0:0,-2.10721,-10 0/0:27.4506:7:7:266:0:0:0,-2.10721,-10 0/0:54.5433:16:16:532:0:0:0,-4.81648,-10 0/0:51.533:15:15:493:0:0:0,-4.51545,-10 0/0:57.5536:17:17:594:0:0:0,-5.11751,-10 0/0:24.4403:6:6:223:0:0:0,-1.80618,-10 0/0:69.5948:21:21:714:0:0:0,-6.32163,-10 0/0:99:37:37:1377:0:0:0,-10,-10 0/0:60.5639:18:18:617:0:0:0,-5.41854,-10 0/0:60.5639:18:18:592:0:0:0,-5.41854,-10 0/0:96.6881:30:30:1030:0:0:0,-9.0309,-10 0/0:72.6051:22:22:805:0:0:0,-6.62266,-10 0/0:60.5639:18:18:608:0:0:0,-5.41854,-10 0/0:96.6881:30:30:1051:0:0:0,-9.0309,-10 0/0:99:33:33:1121:0:0:0,-9.93399,-10 0/0:57.5536:17:17:600:0:0:0,-5.11751,-10 0/0:99:48:48:1632:0:0:0,-10,-10 0/0:75.6154:23:23:821:0:0:0,-6.92369,-10 0/0:36.4815:11:10:369:0:0:0,-3.0103,-10 0/0:99:49:49:1703:0:0:0,-10,-10 0/0:51.533:15:15:531:0:0:0,-4.51545,-10 0/0:99:37:37:1275:0:0:0,-10,-10 0/0:48.5227:14:14:451:0:0:0,-4.21442,-10 0/0:24.4403:6:6:204:0:0:0,-1.80618,-10 0/0:99:39:39:1376:0:0:0,-10,-10 0/0:48.5227:15:14:517:0:0:0,-4.21442,-10 0/0:75.6154:23:23:826:0:0:0,-6.92369,-10 0/0:33.4712:9:9:333:0:0:0,-2.70927,-10 0/0:54.5433:16:16:599:0:0:0,-4.81648,-10 0/0:36.4815:10:10:376:0:0:0,-3.0103,-10 0/0:99:42:42:1411:0:0:0,-10,-10 0/0:66.5845:20:20:750:0:0:0,-6.0206,-10 0/0:99:42:42:1465:0:0:0,-10,-10 0/0:57.5536:17:17:631:0:0:0,-5.11751,-10 0/0:57.5536:17:17:590:0:0:0,-5.11751,-10 0/0:55.5727:25:24:847:1:15:0,-4.62781,-10 0/0:57.5536:17:17:602:0:0:0,-5.11751,-10 0/0:75.6154:23:23:785:0:0:0,-6.92369,-10 0/0:99:38:37:1306:0:0:0,-10,-10 0/0:51.533:15:15:534:0:0:0,-4.51545,-10 0/0:48.5227:14:14:499:0:0:0,-4.21442,-10 0/0:99:31:31:1151:0:0:0,-9.33193,-10 0/0:60.5639:18:18:648:0:0:0,-5.41854,-10 0/0:69.5948:21:21:768:0:0:0,-6.32163,-10 0/0:99:37:37:1327:0:0:0,-10,-10 0/0:39.4918:11:11:377:0:0:0,-3.31133,-10 1/1:39.2078:24:0:0:24:879:-10,-7.22472,0 1/1:9.10481:14:0:0:14:504:-10,-4.21442,0 0/1:0.00207709:3:0:0:3:114:-10,-0.90309,0 0/1:0.56707:11:0:0:11:413:-10,-3.31133,0 1/1:63.2902:32:0:0:32:1148:-10,-9.63296,0 1/1:45.2284:26:0:0:26:930:-10,-7.82678,0 1/1:42.2181:25:0:0:25:900:-10,-7.52575,0 0/1:99:24:14:452:10:368:-10,0,-10 0/0:87.6567:28:27:957:0:0:0,-8.12781,-10 0/0:21.43:5:5:188:0:0:0,-1.50515,-10 0/0:60.5639:18:18:669:0:0:0,-5.41854,-10 0/0:60.5639:18:18:645:0:0:0,-5.41854,-10 0/1:0.0166446:6:0:0:6:226:-10,-1.80618,0 0/0:66.5845:20:20:704:0:0:0,-6.0206,-10 0/1:0.0118652:21:1:36:19:687:-10,-1.37957,0 0/0:54.5433:16:16:554:0:0:0,-4.81648,-10 scaffold_101 2070167 . T C 1820.62 . AB=0.627907;ABP=15.2311;AC=7;AF=0.0380435;AN=184;AO=72;CIGAR=1X;DP=1621;DPB=1621;DPRA=0.982641;EPP=3.13094;EPPR=3.01592;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.956;NS=92;NUMALT=1;ODDS=1.28618;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2588;QR=56020;RO=1546;RPP=150.791;RPPR=3222.57;RUN=1;SAF=38;SAP=3.49285;SAR=34;SRF=788;SRP=4.27442;SRR=758;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.5674:10:10:372:0:0:0,-3.0103,-10 0/0:29.5159:5:5:186:0:0:0,-1.50515,-10 0/0:83.7011:23:23:854:0:0:0,-6.92369,-10 0/0:53.5983:13:13:470:0:0:0,-3.91339,-10 0/0:62.6292:16:16:580:0:0:0,-4.81648,-10 0/0:38.5468:8:8:300:0:0:0,-2.40824,-10 0/0:99:41:41:1470:0:0:0,-10,-10 0/0:80.6909:22:22:798:0:0:0,-6.62266,-10 0/0:56.6086:14:14:529:0:0:0,-4.21442,-10 0/1:0.00329873:4:0:0:4:143:-10,-1.20412,0 0/0:35.5365:7:7:243:0:0:0,-2.10721,-10 0/0:23.4953:3:3:90:0:0:0,-0.90309,-8.4 0/0:99:29:29:1045:0:0:0,-8.72987,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:89.7219:25:25:836:0:0:0,-7.52575,-10 0/0:98.7456:28:28:989:0:0:0,-8.42884,-10 0/0:53.5983:13:13:489:0:0:0,-3.91339,-10 0/0:50.588:12:12:383:0:0:0,-3.61236,-10 0/0:86.7116:24:24:881:0:0:0,-7.22472,-10 0/0:95.7389:27:27:1012:0:0:0,-8.12781,-10 0/0:77.6807:21:21:773:0:0:0,-6.32163,-10 0/0:99:30:30:1076:0:0:0,-9.0309,-10 0/0:29.5159:5:5:189:0:0:0,-1.50515,-10 0/0:74.6704:20:20:745:0:0:0,-6.0206,-10 0/0:77.6807:21:21:794:0:0:0,-6.32163,-10 0/0:56.6086:14:14:485:0:0:0,-4.21442,-10 0/0:86.7116:24:24:875:0:0:0,-7.22472,-10 0/0:68.6498:18:18:634:0:0:0,-5.41854,-10 0/0:62.6292:16:16:565:0:0:0,-4.81648,-10 0/0:99:37:37:1336:0:0:0,-10,-10 0/0:23.4953:3:3:114:0:0:0,-0.90309,-10 0/0:50.588:12:12:448:0:0:0,-3.61236,-10 0/0:59.6189:15:15:566:0:0:0,-4.51545,-10 0/0:35.5365:7:7:264:0:0:0,-2.10721,-10 0/0:68.6498:18:18:618:0:0:0,-5.41854,-10 0/0:29.5159:5:5:190:0:0:0,-1.50515,-10 0/0:47.5777:11:11:368:0:0:0,-3.31133,-10 0/0:86.7116:24:24:864:0:0:0,-7.22472,-10 0/0:56.6086:14:14:515:0:0:0,-4.21442,-10 0/0:59.6189:15:15:553:0:0:0,-4.51545,-10 0/0:83.7011:24:23:873:0:0:0,-6.92369,-10 0/0:62.6292:16:16:590:0:0:0,-4.81648,-10 0/0:83.7011:23:23:839:0:0:0,-6.92369,-10 0/0:99:36:36:1309:0:0:0,-10,-10 0/0:92.7304:26:26:946:0:0:0,-7.82678,-10 0/0:77.6807:21:21:763:0:0:0,-6.32163,-10 0/0:99:38:38:1394:0:0:0,-10,-10 0/0:99:35:35:1312:0:0:0,-10,-10 0/0:38.5468:8:8:277:0:0:0,-2.40824,-10 0/0:99:38:38:1283:0:0:0,-10,-10 0/0:59.6189:15:15:535:0:0:0,-4.51545,-10 0/0:99:35:35:1240:0:0:0,-10,-10 0/0:44.5674:11:10:347:0:0:0,-3.0103,-10 0/0:29.5159:5:5:176:0:0:0,-1.50515,-10 0/0:99:36:36:1290:0:0:0,-10,-10 0/0:47.5777:11:11:393:0:0:0,-3.31133,-10 0/0:77.6807:21:21:779:0:0:0,-6.32163,-10 0/0:23.4953:3:3:111:0:0:0,-0.90309,-10 1/1:11.1379:18:0:0:18:640:-10,-5.41854,0 0/0:41.5571:9:9:336:0:0:0,-2.70927,-10 0/0:83.7011:23:23:819:0:0:0,-6.92369,-10 0/0:47.5777:11:11:384:0:0:0,-3.31133,-10 0/1:99:31:20:707:11:405:-10,0,-10 0/0:71.6601:19:19:685:0:0:0,-5.71957,-10 0/0:35.5365:7:7:242:0:0:0,-2.10721,-10 0/0:74.6704:20:20:727:0:0:0,-6.0206,-10 0/1:99:19:5:190:14:507:-10,0,-10 0/0:44.5674:10:10:367:0:0:0,-3.0103,-10 0/0:99:31:31:1162:0:0:0,-9.33193,-10 0/0:32.5262:6:6:228:0:0:0,-1.80618,-10 0/0:65.6395:17:17:620:0:0:0,-5.11751,-10 0/0:53.5983:13:13:483:0:0:0,-3.91339,-10 0/0:68.6498:18:18:660:0:0:0,-5.41854,-10 0/0:65.6395:17:17:587:0:0:0,-5.11751,-10 0/0:89.7219:25:25:892:0:0:0,-7.52575,-10 0/0:56.6086:15:14:519:0:0:0,-4.21442,-10 0/0:44.5674:10:10:372:0:0:0,-3.0103,-10 0/0:41.5571:9:9:303:0:0:0,-2.70927,-10 0/0:26.5056:4:4:150:0:0:0,-1.20412,-10 0/0:59.6189:15:15:542:0:0:0,-4.51545,-10 0/0:99:30:30:1101:0:0:0,-9.0309,-10 0/0:62.6292:16:16:581:0:0:0,-4.81648,-10 0/0:77.6807:21:21:751:0:0:0,-6.32163,-10 0/0:77.6807:21:21:781:0:0:0,-6.32163,-10 0/0:59.6189:15:15:561:0:0:0,-4.51545,-10 0/0:41.5571:9:9:332:0:0:0,-2.70927,-10 0/0:50.588:12:12:455:0:0:0,-3.61236,-10 0/0:29.5159:5:5:181:0:0:0,-1.50515,-10 0/0:29.5159:5:5:190:0:0:0,-1.50515,-10 0/1:99:20:7:265:13:443:-10,0,-10 0/0:71.6601:19:19:682:0:0:0,-5.71957,-10 0/1:0.938663:12:0:0:12:450:-10,-3.61236,0 scaffold_101 2076742 . G A 1164.34 . AB=0.403846;ABP=7.18621;AC=3;AF=0.0163043;AN=184;AO=47;CIGAR=1X;DP=3069;DPB=3069;DPRA=1.15493;EPP=8.60069;EPPR=6.53122;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9841;NS=92;NUMALT=1;ODDS=2.50288;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1695;QR=110006;RO=3022;RPP=105.07;RPPR=6461.38;RUN=1;SAF=29;SAP=8.60069;SAR=18;SRF=1482;SRP=5.42752;SRR=1540;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:23:23:801:0:0:0,-6.92369,-10 0/0:99:24:24:830:0:0:0,-7.22472,-10 0/0:99:40:40:1482:0:0:0,-10,-10 0/0:84.6101:18:18:673:0:0:0,-5.41854,-10 0/0:99:27:27:1020:0:0:0,-8.12781,-10 0/0:75.5795:15:15:548:0:0:0,-4.51545,-10 0/0:99:56:56:2082:0:0:0,-10,-10 0/1:99:52:31:1098:21:742:-10,0,-10 1/1:11.2119:25:0:0:25:915:-10,-7.52575,0 0/0:48.4868:6:6:206:0:0:0,-1.80618,-10 0/0:69.5589:13:13:470:0:0:0,-3.91339,-10 0/0:63.5383:11:11:412:0:0:0,-3.31133,-10 0/0:99:53:53:1907:0:0:0,-10,-10 0/0:99:58:58:2119:0:0:0,-10,-10 0/0:99:51:51:1890:0:0:0,-10,-10 0/0:99:51:51:1863:0:0:0,-10,-10 0/0:99:52:52:1861:0:0:0,-10,-10 0/0:99:23:23:820:0:0:0,-6.92369,-10 0/0:99:40:40:1433:0:0:0,-10,-10 0/0:99:63:63:2275:0:0:0,-10,-10 0/0:99:26:26:892:0:0:0,-7.82678,-10 0/0:99:56:56:2046:0:0:0,-10,-10 0/0:75.5795:15:15:562:0:0:0,-4.51545,-10 0/0:99:32:32:1142:0:0:0,-9.63296,-10 0/0:99:23:23:824:0:0:0,-6.92369,-10 0/0:99:51:51:1846:0:0:0,-10,-10 0/0:99:26:26:950:0:0:0,-7.82678,-10 0/0:93.6389:21:21:794:0:0:0,-6.32163,-10 0/0:99:44:44:1543:0:0:0,-10,-10 0/0:99:56:56:2058:0:0:0,-10,-10 0/0:66.5486:12:12:434:0:0:0,-3.61236,-10 0/0:45.4765:5:5:190:0:0:0,-1.50515,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:72.5692:14:14:529:0:0:0,-4.21442,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:72.5692:14:14:530:0:0:0,-4.21442,-10 0/0:72.5692:14:14:511:0:0:0,-4.21442,-10 0/0:99:51:51:1788:0:0:0,-10,-10 0/0:99:35:35:1262:0:0:0,-10,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:99:48:48:1762:0:0:0,-10,-10 0/0:99:43:43:1615:0:0:0,-10,-10 0/0:99:32:32:1196:0:0:0,-9.63296,-10 0/0:99:57:57:2066:0:0:0,-10,-10 0/0:99:27:27:1004:0:0:0,-8.12781,-10 0/0:99:23:23:858:0:0:0,-6.92369,-10 0/0:99:52:52:1903:0:0:0,-10,-10 0/0:99:44:44:1641:0:0:0,-10,-10 0/0:78.5898:16:16:580:0:0:0,-4.81648,-10 0/0:99:58:58:2070:0:0:0,-10,-10 0/0:81.6:17:17:632:0:0:0,-5.11751,-10 0/0:99:57:57:2050:0:0:0,-10,-10 0/0:84.6101:18:18:621:0:0:0,-5.41854,-10 0/0:78.5898:16:16:597:0:0:0,-4.81648,-10 0/0:99:63:63:2239:0:0:0,-10,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:99:36:36:1335:0:0:0,-10,-10 0/0:78.5898:16:16:571:0:0:0,-4.81648,-10 0/0:99:32:32:1124:0:0:0,-9.63296,-10 0/0:96.6468:22:22:820:0:0:0,-6.62266,-10 0/0:99:44:44:1602:0:0:0,-10,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:99:48:48:1701:0:0:0,-10,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:63.5383:11:11:408:0:0:0,-3.31133,-10 0/0:99:59:59:2124:0:0:0,-10,-10 0/0:94.3313:38:37:1346:1:38:0,-6.05936,-10 0/0:84.6101:18:18:679:0:0:0,-5.41854,-10 0/0:99:59:59:2152:0:0:0,-10,-10 0/0:99:28:28:975:0:0:0,-8.42884,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:99:50:50:1779:0:0:0,-10,-10 0/0:99:46:46:1697:0:0:0,-10,-10 0/0:99:28:28:1052:0:0:0,-8.42884,-10 0/0:99:51:51:1837:0:0:0,-10,-10 0/0:90.6298:20:20:753:0:0:0,-6.0206,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:99:25:25:945:0:0:0,-7.52575,-10 0/0:48.4868:6:6:179:0:0:0,-1.80618,-10 0/0:96.6468:22:22:783:0:0:0,-6.62266,-10 0/0:99:58:58:2136:0:0:0,-10,-10 0/0:99:53:53:1882:0:0:0,-10,-10 0/0:99:49:49:1778:0:0:0,-10,-10 0/0:99:38:38:1386:0:0:0,-10,-10 0/0:99:37:37:1347:0:0:0,-10,-10 0/0:78.5898:16:16:608:0:0:0,-4.81648,-10 0/0:99:33:33:1182:0:0:0,-9.93399,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/0:45.4765:5:5:186:0:0:0,-1.50515,-10 0/0:99:27:27:1003:0:0:0,-8.12781,-10 0/0:99:39:39:1446:0:0:0,-10,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 scaffold_101 2076749 . A T 271.597 . AB=0.461538;ABP=3.34437;AC=1;AF=0.00543478;AN=184;AO=17;CIGAR=1X;DP=3069;DPB=3069;DPRA=1.01524;EPP=6.20364;EPPR=5.24447;GTI=0;LEN=1;MEANALT=1;MQM=58.9412;MQMR=59.9902;NS=92;NUMALT=1;ODDS=16.8026;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=493;QR=111009;RO=3048;RPP=39.9253;RPPR=6621.66;RUN=1;SAF=11;SAP=6.20364;SAR=6;SRF=1496;SRP=5.24447;SRR=1552;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:23:23:825:0:0:0,-6.92369,-10 0/0:99:24:23:829:1:14:0,-4.44451,-10 0/0:99:40:40:1404:0:0:0,-10,-10 0/0:99:18:18:649:0:0:0,-5.41854,-10 0/0:99:27:27:965:0:0:0,-8.12781,-10 0/0:99:15:15:564:0:0:0,-4.51545,-10 0/0:99:56:56:2097:0:0:0,-10,-10 0/0:99:52:52:1943:0:0:0,-10,-10 0/0:99:25:25:931:0:0:0,-7.52575,-10 0/0:80.13:6:6:223:0:0:0,-1.80618,-10 0/0:99:13:13:465:0:0:0,-3.91339,-10 0/0:95.1785:11:11:408:0:0:0,-3.31133,-10 0/0:99:53:53:1939:0:0:0,-10,-10 0/0:99:58:58:2093:0:0:0,-10,-10 0/0:99:51:51:1828:0:0:0,-10,-10 0/0:99:51:51:1877:0:0:0,-10,-10 0/0:99:52:52:1928:0:0:0,-10,-10 0/0:99:23:22:824:0:0:0,-6.62266,-10 0/0:99:40:40:1492:0:0:0,-10,-10 0/0:99:63:63:2306:0:0:0,-10,-10 0/0:99:26:26:927:0:0:0,-7.82678,-10 0/0:99:56:56:2038:0:0:0,-10,-10 0/0:99:15:15:564:0:0:0,-4.51545,-10 0/0:99:32:32:1136:0:0:0,-9.63296,-10 0/0:99:23:23:800:0:0:0,-6.92369,-10 0/0:99:51:51:1800:0:0:0,-10,-10 0/0:99:26:26:954:0:0:0,-7.82678,-10 0/0:99:21:21:794:0:0:0,-6.32163,-10 0/0:99:44:44:1519:0:0:0,-10,-10 0/0:99:56:56:2079:0:0:0,-10,-10 0/0:72.9728:12:11:418:1:14:0,-1.13318,-10 0/0:77.1198:5:5:161:0:0:0,-1.50515,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:99:14:14:531:0:0:0,-4.21442,-10 0/0:99:32:32:1164:0:0:0,-9.63296,-10 0/0:99:14:14:523:0:0:0,-4.21442,-10 0/0:99:14:14:510:0:0:0,-4.21442,-10 0/0:99:51:51:1786:0:0:0,-10,-10 0/0:99:35:35:1249:0:0:0,-10,-10 0/0:99:32:32:1167:0:0:0,-9.63296,-10 0/0:99:48:48:1751:0:0:0,-10,-10 0/0:99:43:43:1543:0:0:0,-10,-10 0/0:99:32:32:1187:0:0:0,-9.63296,-10 0/0:99:57:57:2101:0:0:0,-10,-10 0/0:99:27:27:978:0:0:0,-8.12781,-10 0/0:99:23:23:866:0:0:0,-6.92369,-10 0/0:99:52:52:1893:0:0:0,-10,-10 0/0:99:44:44:1647:0:0:0,-10,-10 0/0:99:16:16:573:0:0:0,-4.81648,-10 0/0:99:58:58:2042:0:0:0,-10,-10 0/0:99:17:17:619:0:0:0,-5.11751,-10 0/0:99:57:57:2069:0:0:0,-10,-10 0/0:99:18:18:630:0:0:0,-5.41854,-10 0/0:99:16:16:591:0:0:0,-4.81648,-10 0/0:99:63:63:2274:0:0:0,-10,-10 0/0:99:29:29:1047:0:0:0,-8.72987,-10 0/0:99:36:36:1313:0:0:0,-10,-10 0/0:99:16:16:593:0:0:0,-4.81648,-10 0/0:99:32:32:1156:0:0:0,-9.63296,-10 0/0:99:22:22:821:0:0:0,-6.62266,-10 0/0:99:44:44:1620:0:0:0,-10,-10 0/0:99:30:30:1123:0:0:0,-9.0309,-10 0/0:99:48:48:1682:0:0:0,-10,-10 0/1:99:26:14:521:12:423:-10,0,-10 0/0:92.1698:11:10:364:0:0:0,-3.0103,-10 0/0:99:59:59:2167:0:0:0,-10,-10 0/0:99:38:37:1329:0:0:0,-10,-10 0/0:99:18:18:651:0:0:0,-5.41854,-10 0/0:99:59:58:2112:1:14:0,-10,-10 0/0:99:28:28:1038:0:0:0,-8.42884,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:99:50:50:1774:0:0:0,-10,-10 0/0:99:46:46:1687:0:0:0,-10,-10 0/0:99:28:28:997:0:0:0,-8.42884,-10 0/0:99:51:51:1858:0:0:0,-10,-10 0/0:99:20:20:723:0:0:0,-6.0206,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:80.13:6:6:199:0:0:0,-1.80618,-10 0/0:99:22:22:820:0:0:0,-6.62266,-10 0/0:99:58:58:2146:0:0:0,-10,-10 0/0:99:53:52:1953:0:0:0,-10,-10 0/0:99:49:48:1753:1:14:0,-10,-10 0/0:99:38:38:1400:0:0:0,-10,-10 0/0:99:37:37:1367:0:0:0,-10,-10 0/0:99:16:16:608:0:0:0,-4.81648,-10 0/0:99:33:32:1166:1:14:0,-7.01548,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/0:77.1198:5:5:166:0:0:0,-1.50515,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:99:39:39:1418:0:0:0,-10,-10 0/0:99:26:26:917:0:0:0,-7.82678,-10 scaffold_101 2078682 . A G 715.136 . AB=0.604167;ABP=7.5342;AC=3;AF=0.0163043;AN=184;AO=29;CIGAR=1X;DP=1786;DPB=1786;DPRA=0.819333;EPP=6.67934;EPPR=3.5055;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9897;NS=92;NUMALT=1;ODDS=8.9682;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1061;QR=64929;RO=1754;RPP=65.983;RPPR=3811.77;RUN=1;SAF=18;SAP=6.67934;SAR=11;SRF=867;SRP=3.5055;SRR=887;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:75.0736:16:16:570:0:0:0,-4.81648,-10 0/0:60.0222:11:11:396:0:0:0,-3.31133,-10 0/0:90.1238:21:21:781:0:0:0,-6.32163,-10 0/0:60.0222:11:11:405:0:0:0,-3.31133,-10 0/0:44.9707:6:6:219:0:0:0,-1.80618,-10 0/0:47.981:7:7:261:0:0:0,-2.10721,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:90.1238:21:21:789:0:0:0,-6.32163,-10 0/0:69.0531:14:14:521:0:0:0,-4.21442,-10 0/0:38.9501:4:4:152:0:0:0,-1.20412,-10 0/0:60.0222:11:11:410:0:0:0,-3.31133,-10 0/0:50.9913:8:8:278:0:0:0,-2.40824,-10 0/0:99:37:37:1322:0:0:0,-10,-10 0/0:99:30:30:1066:0:0:0,-9.0309,-10 0/0:96.1445:23:23:860:0:0:0,-6.92369,-10 0/0:87.1147:20:20:714:0:0:0,-6.0206,-10 0/0:84.1045:19:19:690:0:0:0,-5.71957,-10 0/0:78.0839:17:17:646:0:0:0,-5.11751,-10 0/0:81.0942:18:18:669:0:0:0,-5.41854,-10 0/0:99:39:39:1380:0:0:0,-10,-10 0/0:99:25:25:939:0:0:0,-7.52575,-10 0/0:99:43:43:1562:0:0:0,-10,-10 0/0:57.0119:10:10:380:0:0:0,-3.0103,-10 0/0:99:34:33:1200:0:0:0,-9.93399,-10 0/0:93.1348:22:22:801:0:0:0,-6.62266,-10 0/1:99:22:8:304:14:526:-10,0,-10 0/0:87.1147:20:20:734:0:0:0,-6.0206,-10 0/0:69.0531:14:14:532:0:0:0,-4.21442,-10 0/0:99:32:32:1203:0:0:0,-9.63296,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/1:2.09815e-05:6:0:0:6:194:-10,-1.80618,0 0/0:78.0839:17:17:644:0:0:0,-5.11751,-10 0/0:63.0325:12:12:433:0:0:0,-3.61236,-10 0/0:47.981:7:7:241:0:0:0,-2.10721,-10 0/0:93.1348:22:22:819:0:0:0,-6.62266,-10 0/0:69.0531:14:14:531:0:0:0,-4.21442,-10 0/0:50.9913:8:8:285:0:0:0,-2.40824,-10 0/0:90.1238:21:21:794:0:0:0,-6.32163,-10 0/0:96.1445:23:23:842:0:0:0,-6.92369,-10 0/0:72.0633:15:15:557:0:0:0,-4.51545,-10 0/0:99:26:26:957:0:0:0,-7.82678,-10 0/0:66.0427:13:13:494:0:0:0,-3.91339,-10 0/0:84.1045:19:19:719:0:0:0,-5.71957,-10 0/0:99:32:32:1169:0:0:0,-9.63296,-10 0/1:99:20:11:414:9:341:-10,0,-10 0/0:78.0839:17:17:628:0:0:0,-5.11751,-10 0/0:99:43:43:1619:0:0:0,-10,-10 0/0:99:33:33:1243:0:0:0,-9.93399,-10 0/0:57.0119:10:10:377:0:0:0,-3.0103,-10 0/0:99:26:25:924:0:0:0,-7.52575,-10 0/0:72.0633:15:15:548:0:0:0,-4.51545,-10 0/0:99:30:30:1130:0:0:0,-9.0309,-10 0/0:96.1445:23:23:872:0:0:0,-6.92369,-10 0/0:47.981:7:7:266:0:0:0,-2.10721,-10 0/0:99:41:41:1537:0:0:0,-10,-10 0/0:63.0325:12:12:450:0:0:0,-3.61236,-10 0/0:81.0942:18:18:665:0:0:0,-5.41854,-10 0/0:50.9913:8:8:301:0:0:0,-2.40824,-10 0/0:81.0942:18:18:650:0:0:0,-5.41854,-10 0/0:66.0427:13:13:494:0:0:0,-3.91339,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:90.1238:21:21:789:0:0:0,-6.32163,-10 0/0:99:40:39:1452:0:0:0,-10,-10 0/0:90.1238:21:21:774:0:0:0,-6.32163,-10 0/0:66.0427:13:13:482:0:0:0,-3.91339,-10 0/0:99:30:30:1120:0:0:0,-9.0309,-10 0/0:87.1147:20:20:721:0:0:0,-6.0206,-10 0/0:47.981:7:7:240:0:0:0,-2.10721,-10 0/0:99:26:26:963:0:0:0,-7.82678,-10 0/0:50.9913:8:8:304:0:0:0,-2.40824,-10 0/0:72.0633:15:15:551:0:0:0,-4.51545,-10 0/0:99:25:25:916:0:0:0,-7.52575,-10 0/0:87.1147:20:20:728:0:0:0,-6.0206,-10 0/0:69.0531:14:14:509:0:0:0,-4.21442,-10 0/0:90.1238:21:21:776:0:0:0,-6.32163,-10 0/0:78.0839:17:17:645:0:0:0,-5.11751,-10 0/0:72.0633:15:15:562:0:0:0,-4.51545,-10 0/0:60.0222:11:11:417:0:0:0,-3.31133,-10 0/0:44.9707:6:6:228:0:0:0,-1.80618,-10 0/0:72.0633:15:15:556:0:0:0,-4.51545,-10 0/0:99:24:24:910:0:0:0,-7.22472,-10 0/0:99:35:35:1268:0:0:0,-10,-10 0/0:90.1238:21:21:796:0:0:0,-6.32163,-10 0/0:99:27:27:1023:0:0:0,-8.12781,-10 0/0:87.1147:20:20:734:0:0:0,-6.0206,-10 0/0:50.9913:8:8:279:0:0:0,-2.40824,-10 0/0:72.0633:15:15:570:0:0:0,-4.51545,-10 0/0:54.0016:9:9:330:0:0:0,-2.70927,-10 0/0:41.9604:5:5:190:0:0:0,-1.50515,-10 0/0:90.1238:21:21:794:0:0:0,-6.32163,-10 0/0:72.0633:15:15:570:0:0:0,-4.51545,-10 0/0:75.0736:16:16:602:0:0:0,-4.81648,-10 scaffold_101 2095669 . A G 6657.48 . AB=0.496711;ABP=3.03887;AC=28;AF=0.152174;AN=184;AO=250;CIGAR=1X;DP=1390;DPB=1390;DPRA=1.47557;EPP=8.01337;EPPR=12.6377;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9965;NS=92;NUMALT=1;ODDS=0.252253;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9084;QR=41234;RO=1137;RPP=511.691;RPPR=2318.1;RUN=1;SAF=141;SAP=11.9047;SAR=109;SRF=549;SRP=5.91515;SRR=588;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:8.84199:15:14:528:1:37:-0.360641,0,-10 0/0:21.4919:5:5:163:0:0:0,-1.50515,-10 0/0:72.667:22:22:826:0:0:0,-6.62266,-10 0/0:48.5846:14:14:490:0:0:0,-4.21442,-10 0/0:30.5228:8:8:295:0:0:0,-2.40824,-10 0/0:24.5022:6:6:205:0:0:0,-1.80618,-10 0/0:63.6361:19:19:691:0:0:0,-5.71957,-10 0/1:99:24:11:412:13:488:-10,0,-10 0/0:36.5434:10:10:372:0:0:0,-3.0103,-10 0/0:18.4816:4:4:152:0:0:0,-1.20412,-10 0/0:12.461:2:2:74:0:0:0,-0.60206,-7.03 0/0:15.4713:3:3:114:0:0:0,-0.90309,-10 0/0:72.667:22:22:796:0:0:0,-6.62266,-10 0/0:42.564:12:12:443:0:0:0,-3.61236,-10 0/1:99:20:10:355:10:360:-10,0,-10 0/0:39.5537:11:11:408:0:0:0,-3.31133,-10 0/0:75.6773:23:23:824:0:0:0,-6.92369,-10 0/0:30.5228:8:8:291:0:0:0,-2.40824,-10 0/0:57.6155:17:17:631:0:0:0,-5.11751,-10 1/1:33.3449:31:1:38:30:1081:-10,-4.04057,0 0/1:99:14:9:304:5:190:-10,0,-10 0/1:99:29:22:790:7:241:-10,0,-10 0/1:0.880569:6:0:0:6:222:-10,-1.80618,0 0/1:99:14:9:318:5:185:-10,0,-10 0/0:60.6258:18:18:636:0:0:0,-5.41854,-10 0/0:42.564:12:12:414:0:0:0,-3.61236,-10 0/0:36.5434:10:10:367:0:0:0,-3.0103,-10 0/0:45.5743:13:13:489:0:0:0,-3.91339,-10 1/1:41.7695:17:0:0:17:615:-10,-5.11751,0 0/1:99:22:8:301:14:522:-10,0,-10 0/0:15.4713:3:3:109:0:0:0,-0.90309,-10 0/0:63.6361:19:19:685:0:0:0,-5.71957,-10 0/0:42.564:12:12:435:0:0:0,-3.61236,-10 1/1:17.6871:9:0:0:9:318:-10,-2.70927,0 0/0:36.5434:10:10:356:0:0:0,-3.0103,-10 0/0:30.5228:8:8:279:0:0:0,-2.40824,-10 1/1:23.7077:11:0:0:11:384:-10,-3.31133,0 0/1:99:23:13:464:10:355:-10,0,-10 0/0:54.6052:16:16:562:0:0:0,-4.81648,-10 0/0:45.5743:13:13:480:0:0:0,-3.91339,-10 0/0:72.667:23:22:790:0:0:0,-6.62266,-10 0/0:60.6258:18:18:660:0:0:0,-5.41854,-10 0/0:45.5743:13:13:487:0:0:0,-3.91339,-10 0/1:99:22:7:265:15:564:-10,0,-10 0/0:51.5949:15:15:531:0:0:0,-4.51545,-10 0/1:99:14:4:151:10:369:-10,0,-10 0/1:99:27:15:534:12:423:-10,0,-10 0/0:69.6567:22:21:772:0:0:0,-6.32163,-10 0/0:33.5331:9:9:325:0:0:0,-2.70927,-10 0/1:99:32:12:419:20:696:-10,0,-10 1/1:35.7489:15:0:0:15:542:-10,-4.51545,0 0/0:63.7818:36:35:1276:1:38:0,-5.48078,-10 0/0:24.5022:6:6:203:0:0:0,-1.80618,-10 1/1:11.6665:7:0:0:7:260:-10,-2.10721,0 0/1:99:42:19:683:23:861:-10,0,-10 1/1:11.6665:7:0:0:7:257:-10,-2.10721,0 0/0:0.585901:16:15:504:1:38:-0.18764,0,-10 0/0:30.5228:8:8:299:0:0:0,-2.40824,-10 0/0:39.5537:11:11:388:0:0:0,-3.31133,-10 0/0:36.5434:10:10:357:0:0:0,-3.0103,-10 0/0:69.6567:21:21:756:0:0:0,-6.32163,-10 0/0:39.5537:11:11:413:0:0:0,-3.31133,-10 0/0:81.6979:25:25:874:0:0:0,-7.52575,-10 0/0:39.5537:11:11:412:0:0:0,-3.31133,-10 0/0:48.5846:14:14:523:0:0:0,-4.21442,-10 0/0:48.5846:14:14:510:0:0:0,-4.21442,-10 0/0:51.5949:15:15:561:0:0:0,-4.51545,-10 0/0:39.5537:11:11:381:0:0:0,-3.31133,-10 0/0:78.6876:24:24:886:0:0:0,-7.22472,-10 0/0:51.5949:16:15:531:0:0:0,-4.51545,-10 0/0:48.5846:14:14:498:0:0:0,-4.21442,-10 0/0:66.6464:20:20:754:0:0:0,-6.0206,-10 0/0:72.667:22:22:800:0:0:0,-6.62266,-10 0/0:30.5228:8:8:272:0:0:0,-2.40824,-10 0/0:54.6052:16:16:545:0:0:0,-4.81648,-10 0/0:45.5743:13:13:477:0:0:0,-3.91339,-10 0/0:33.5331:9:9:328:0:0:0,-2.70927,-10 0/0:39.5537:11:11:411:0:0:0,-3.31133,-10 0/0:24.5022:6:6:222:0:0:0,-1.80618,-10 0/0:21.4919:5:5:180:0:0:0,-1.50515,-10 0/0:28.4853:23:22:798:1:38:0,-1.76196,-10 0/0:84.708:26:26:941:0:0:0,-7.82678,-10 0/0:66.6464:20:20:713:0:0:0,-6.0206,-10 0/0:66.6464:20:20:749:0:0:0,-6.0206,-10 0/0:72.667:22:22:819:0:0:0,-6.62266,-10 0/0:27.5125:7:7:252:0:0:0,-2.10721,-10 0/0:60.6258:18:18:669:0:0:0,-5.41854,-10 0/0:33.5331:9:9:342:0:0:0,-2.70927,-10 0/0:27.5125:7:7:252:0:0:0,-2.10721,-10 0/0:57.6155:17:17:642:0:0:0,-5.11751,-10 0/0:45.5743:13:13:469:0:0:0,-3.91339,-10 0/0:48.5846:14:14:513:0:0:0,-4.21442,-10 scaffold_101 2131399 . C G 355.223 . AB=0.466667;ABP=3.29983;AC=1;AF=0.00543478;AN=184;AO=15;CIGAR=1X;DP=1600;DPB=1600;DPRA=1.90554;EPP=4.31318;EPPR=8.10812;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9943;NS=92;NUMALT=1;ODDS=5.58215;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=557;QR=58178;RO=1585;RPP=35.5824;RPPR=3444.79;RUN=1;SAF=6;SAP=4.31318;SAR=9;SRF=823;SRP=8.10812;SRR=762;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.4007:13:13:457:0:0:0,-3.91339,-10 0/0:24.2771:1:1:38:0:0:0,-0.30103,-3.8 0/0:90.5029:23:23:826:0:0:0,-6.92369,-10 0/0:54.3801:11:11:389:0:0:0,-3.31133,-10 0/0:57.3904:12:12:430:0:0:0,-3.61236,-10 0/0:42.3389:7:7:266:0:0:0,-2.10721,-10 0/0:99:51:51:1822:0:0:0,-10,-10 0/0:81.4727:20:20:756:0:0:0,-6.0206,-10 0/0:60.4007:13:13:469:0:0:0,-3.91339,-10 0/0:51.3698:10:10:371:0:0:0,-3.0103,-10 0/0:33.308:4:4:150:0:0:0,-1.20412,-10 0/0:33.308:4:4:120:0:0:0,-1.20412,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:87.493:22:22:807:0:0:0,-6.62266,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:96.5212:25:25:935:0:0:0,-7.52575,-10 0/0:87.493:22:22:794:0:0:0,-6.62266,-10 0/0:42.3389:7:7:266:0:0:0,-2.10721,-10 0/0:90.5029:23:23:832:0:0:0,-6.92369,-10 0/0:86.616:35:34:1272:1:25:0,-6.49198,-10 0/0:78.4625:19:19:695:0:0:0,-5.71957,-10 0/0:96.5212:25:25:892:0:0:0,-7.52575,-10 0/0:54.3801:11:11:401:0:0:0,-3.31133,-10 0/0:57.3904:12:12:453:0:0:0,-3.61236,-10 0/0:63.411:14:14:530:0:0:0,-4.21442,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:63.411:14:14:523:0:0:0,-4.21442,-10 0/0:57.3904:12:12:455:0:0:0,-3.61236,-10 0/0:63.411:14:14:531:0:0:0,-4.21442,-10 0/0:99:38:38:1396:0:0:0,-10,-10 0/0:39.3286:6:6:211:0:0:0,-1.80618,-10 0/0:51.3698:10:10:351:0:0:0,-3.0103,-10 0/0:75.4522:18:18:682:0:0:0,-5.41854,-10 0/0:45.3492:8:8:280:0:0:0,-2.40824,-10 0/0:57.3904:12:12:426:0:0:0,-3.61236,-10 0/0:45.3492:8:8:298:0:0:0,-2.40824,-10 0/0:48.3595:9:9:305:0:0:0,-2.70927,-10 0/0:90.5029:23:23:863:0:0:0,-6.92369,-10 0/0:75.4522:18:18:680:0:0:0,-5.41854,-10 0/0:69.4316:16:16:577:0:0:0,-4.81648,-10 0/0:99:32:32:1202:0:0:0,-9.63296,-10 0/0:60.4007:13:13:477:0:0:0,-3.91339,-10 0/0:63.411:14:14:523:0:0:0,-4.21442,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:78.4625:19:19:711:0:0:0,-5.71957,-10 0/0:57.3904:12:12:450:0:0:0,-3.61236,-10 0/0:99:36:36:1366:0:0:0,-10,-10 0/0:57.3904:12:12:432:0:0:0,-3.61236,-10 0/0:51.3698:10:10:380:0:0:0,-3.0103,-10 0/0:99:36:36:1319:0:0:0,-10,-10 0/0:51.3698:10:10:375:0:0:0,-3.0103,-10 0/0:99:35:35:1262:0:0:0,-10,-10 0/0:66.4213:15:15:535:0:0:0,-4.51545,-10 0/0:42.3389:7:7:231:0:0:0,-2.10721,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:63.411:14:14:486:0:0:0,-4.21442,-10 0/0:66.4213:15:15:555:0:0:0,-4.51545,-10 0/0:36.3183:5:5:176:0:0:0,-1.50515,-10 0/0:72.4419:17:17:629:0:0:0,-5.11751,-10 0/0:63.411:14:14:502:0:0:0,-4.21442,-10 0/0:99:28:28:1038:0:0:0,-8.42884,-10 0/0:81.4727:20:20:738:0:0:0,-6.0206,-10 0/0:99:31:31:1158:0:0:0,-9.33193,-10 0/0:90.5029:23:23:860:0:0:0,-6.92369,-10 0/0:36.3183:5:5:190:0:0:0,-1.50515,-10 0/1:99:30:16:583:14:532:-10,0,-10 0/0:81.4727:20:20:726:0:0:0,-6.0206,-10 0/0:54.3801:11:11:408:0:0:0,-3.31133,-10 0/0:99:34:34:1271:0:0:0,-10,-10 0/0:45.3492:8:8:276:0:0:0,-2.40824,-10 0/0:72.4419:17:17:635:0:0:0,-5.11751,-10 0/0:99:28:28:1007:0:0:0,-8.42884,-10 0/0:99:29:29:1097:0:0:0,-8.72987,-10 0/0:75.4522:18:18:673:0:0:0,-5.41854,-10 0/0:96.5212:25:25:917:0:0:0,-7.52575,-10 0/0:63.411:14:14:509:0:0:0,-4.21442,-10 0/0:45.3492:8:8:304:0:0:0,-2.40824,-10 0/0:60.4007:13:13:483:0:0:0,-3.91339,-10 0/0:42.3389:7:7:238:0:0:0,-2.10721,-10 0/0:54.3801:11:11:418:0:0:0,-3.31133,-10 0/0:99:29:29:1051:0:0:0,-8.72987,-10 0/0:99:26:26:982:0:0:0,-7.82678,-10 0/0:96.5212:25:25:899:0:0:0,-7.52575,-10 0/0:78.4625:19:19:675:0:0:0,-5.71957,-10 0/0:57.3904:12:12:431:0:0:0,-3.61236,-10 0/0:27.2874:2:2:76:0:0:0,-0.60206,-7.22 0/0:75.4522:18:18:655:0:0:0,-5.41854,-10 0/0:48.3595:9:9:319:0:0:0,-2.70927,-10 0/0:36.3183:5:5:189:0:0:0,-1.50515,-10 0/0:48.3595:9:9:342:0:0:0,-2.70927,-10 0/0:48.3595:9:9:290:0:0:0,-2.70927,-10 0/0:51.3698:10:10:347:0:0:0,-3.0103,-10 scaffold_101 2138635 . T C 3322.3 . AB=0.558824;ABP=6.07591;AC=14;AF=0.076087;AN=184;AO=130;CIGAR=1X;DP=1571;DPB=1571;DPRA=0.923092;EPP=4.07933;EPPR=3.16131;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9722;NS=92;NUMALT=1;ODDS=0.127616;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4680;QR=52636;RO=1438;RPP=285.302;RPPR=3030.77;RUN=1;SAF=61;SAP=4.07933;SAR=69;SRF=713;SRP=3.22775;SRR=725;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.1085:17:16:586:0:0:0,-4.81648,-10 0/1:0.253273:9:0:0:9:341:-10,-2.70927,0 1/1:38.1902:20:0:0:20:732:-10,-6.0206,0 0/1:1.11596:11:0:0:11:415:-10,-3.31133,0 0/0:41.0364:9:9:342:0:0:0,-2.70927,-10 0/0:56.0879:14:14:504:0:0:0,-4.21442,-10 0/0:99:37:36:1327:0:0:0,-10,-10 0/0:77.16:21:21:734:0:0:0,-6.32163,-10 0/1:5.7947:13:12:433:1:38:-1.00055,0,-10 0/0:25.9849:4:4:148:0:0:0,-1.20412,-10 0/0:25.9849:4:4:152:0:0:0,-1.20412,-10 0/0:41.0364:9:9:327:0:0:0,-2.70927,-10 0/0:83.1806:23:23:847:0:0:0,-6.92369,-10 0/0:77.16:21:21:796:0:0:0,-6.32163,-10 0/0:99:31:31:1166:0:0:0,-9.33193,-10 0/0:71.1394:19:19:718:0:0:0,-5.71957,-10 0/0:68.1291:18:18:682:0:0:0,-5.41854,-10 0/0:47.057:11:11:399:0:0:0,-3.31133,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/0:99:47:47:1695:0:0:0,-10,-10 0/0:77.16:21:21:772:0:0:0,-6.32163,-10 0/0:99:29:29:1046:0:0:0,-8.72987,-10 0/0:28.9952:5:5:182:0:0:0,-1.50515,-10 0/0:83.1806:23:23:815:0:0:0,-6.92369,-10 0/0:28.9952:5:5:190:0:0:0,-1.50515,-10 0/0:86.1904:24:24:864:0:0:0,-7.22472,-10 0/0:74.1497:20:20:729:0:0:0,-6.0206,-10 0/0:44.0467:10:10:336:0:0:0,-3.0103,-10 0/0:56.0879:14:14:481:0:0:0,-4.21442,-10 0/0:83.1806:23:23:833:0:0:0,-6.92369,-10 0/0:22.9746:3:3:114:0:0:0,-0.90309,-10 0/0:22.9746:3:3:114:0:0:0,-0.90309,-10 0/0:50.0673:12:12:434:0:0:0,-3.61236,-10 0/0:50.0673:12:12:451:0:0:0,-3.61236,-10 0/0:47.057:11:11:417:0:0:0,-3.31133,-10 0/0:41.0364:9:9:340:0:0:0,-2.70927,-10 0/0:62.1085:16:16:596:0:0:0,-4.81648,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:56.0879:14:14:483:0:0:0,-4.21442,-10 0/0:53.0776:13:13:488:0:0:0,-3.91339,-10 0/0:74.1497:20:20:702:0:0:0,-6.0206,-10 0/0:65.1188:17:17:587:0:0:0,-5.11751,-10 0/0:44.0467:10:10:380:0:0:0,-3.0103,-10 0/0:98.2314:28:28:1044:0:0:0,-8.42884,-10 0/0:59.0982:15:15:547:0:0:0,-4.51545,-10 0/0:74.1497:20:20:746:0:0:0,-6.0206,-10 0/0:89.2003:25:25:923:0:0:0,-7.52575,-10 0/0:65.1188:17:17:633:0:0:0,-5.11751,-10 0/0:32.0055:6:6:228:0:0:0,-1.80618,-10 0/0:99:38:38:1408:0:0:0,-10,-10 0/0:38.0261:8:8:303:0:0:0,-2.40824,-10 0/0:89.2003:25:25:896:0:0:0,-7.52575,-10 0/0:56.0879:14:14:511:0:0:0,-4.21442,-10 0/0:35.0158:7:7:257:0:0:0,-2.10721,-10 0/0:99:34:34:1187:0:0:0,-10,-10 0/0:53.0776:13:13:489:0:0:0,-3.91339,-10 0/0:53.0776:13:13:469:0:0:0,-3.91339,-10 0/0:50.0673:12:12:422:0:0:0,-3.61236,-10 0/0:71.1394:19:19:691:0:0:0,-5.71957,-10 0/0:44.0467:10:10:365:0:0:0,-3.0103,-10 0/0:86.1904:24:24:889:0:0:0,-7.22472,-10 0/0:71.1394:19:19:692:0:0:0,-5.71957,-10 0/0:99:39:39:1445:0:0:0,-10,-10 0/0:71.1394:19:19:712:0:0:0,-5.71957,-10 0/0:47.057:11:11:392:0:0:0,-3.31133,-10 0/0:80.1702:22:22:790:0:0:0,-6.62266,-10 0/0:65.1188:17:17:619:0:0:0,-5.11751,-10 0/0:32.0055:6:6:227:0:0:0,-1.80618,-10 0/0:86.1904:24:24:890:0:0:0,-7.22472,-10 0/0:53.0776:13:13:493:0:0:0,-3.91339,-10 0/0:65.1188:17:17:598:0:0:0,-5.11751,-10 0/0:83.1806:23:23:837:0:0:0,-6.92369,-10 0/0:80.1702:22:22:810:0:0:0,-6.62266,-10 0/0:47.057:11:11:383:0:0:0,-3.31133,-10 0/0:80.1702:22:22:805:0:0:0,-6.62266,-10 0/0:28.9952:5:5:190:0:0:0,-1.50515,-10 0/0:74.1497:21:20:738:0:0:0,-6.0206,-10 0/0:56.0879:14:14:497:0:0:0,-4.21442,-10 0/1:0.522236:10:0:0:10:362:-10,-3.0103,0 1/1:17.1181:13:0:0:13:464:-10,-3.91339,0 1/1:98.3887:40:0:0:40:1414:-10,-10,0 0/1:99:18:11:401:7:243:-10,0,-10 0/1:99:24:10:375:14:483:-10,0,-10 0/0:98.2314:28:28:1024:0:0:0,-8.42884,-10 0/0:50.0673:12:12:438:0:0:0,-3.61236,-10 0/0:38.0261:8:8:295:0:0:0,-2.40824,-10 0/0:68.1291:18:18:670:0:0:0,-5.41854,-10 0/0:50.0673:12:12:452:0:0:0,-3.61236,-10 0/1:59.748:5:3:114:2:76:-6.71485,0,-10 0/0:47.057:11:11:417:0:0:0,-3.31133,-10 0/1:81.3508:12:9:337:3:112:-9.1834,0,-10 0/0:56.0879:14:14:521:0:0:0,-4.21442,-10 scaffold_101 2151027 . G C 825.714 . AB=0.426667;ABP=6.51361;AC=3;AF=0.016129;AN=186;AO=33;CIGAR=1X;DP=1702;DPB=1702;DPRA=1.22768;EPP=6.23461;EPPR=3.09372;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9616;NS=93;NUMALT=1;ODDS=3.18423;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1227;QR=59830;RO=1666;RPP=74.6689;RPPR=3594.67;RUN=1;SAF=20;SAP=6.23461;SAR=13;SRF=826;SRP=3.26577;SRR=840;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.0334:17:17:594:0:0:0,-5.11751,-10 0/0:44.9407:8:8:285:0:0:0,-2.40824,-10 0/0:75.0437:18:18:652:0:0:0,-5.41854,-10 0/0:59.9922:13:13:489:0:0:0,-3.91339,-10 0/0:59.9922:13:13:468:0:0:0,-3.91339,-10 0/0:47.951:9:9:318:0:0:0,-2.70927,-10 0/0:99:36:36:1307:0:0:0,-10,-10 0/1:99:21:15:526:6:218:-10,0,-10 0/0:38.9201:6:6:222:0:0:0,-1.80618,-10 0/0:38.9201:6:6:227:0:0:0,-1.80618,-10 0/0:32.8995:4:4:127:0:0:0,-1.20412,-10 0/0:47.951:9:9:330:0:0:0,-2.70927,-10 0/0:99:31:31:1069:0:0:0,-9.33193,-10 0/0:99:38:38:1362:0:0:0,-10,-10 0/0:99:28:28:1019:0:0:0,-8.42884,-10 0/0:69.0231:16:16:597:0:0:0,-4.81648,-10 0/0:99:34:34:1204:0:0:0,-10,-10 0/0:35.9098:5:5:183:0:0:0,-1.50515,-10 0/0:90.0952:23:23:839:0:0:0,-6.92369,-10 0/0:99:34:34:1207:0:0:0,-10,-10 0/0:63.0025:14:14:509:0:0:0,-4.21442,-10 0/0:99:35:35:1284:0:0:0,-10,-10 0/0:66.0128:15:15:525:0:0:0,-4.51545,-10 0/0:59.9922:13:13:448:0:0:0,-3.91339,-10 0/0:87.0844:22:22:806:0:0:0,-6.62266,-10 0/0:93.1034:24:24:895:0:0:0,-7.22472,-10 0/0:72.0334:17:17:615:0:0:0,-5.11751,-10 0/0:66.0128:15:15:559:0:0:0,-4.51545,-10 0/0:96.1155:25:25:798:0:0:0,-7.52575,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:38.9201:6:6:199:0:0:0,-1.80618,-10 0/0:78.054:20:19:699:0:0:0,-5.71957,-10 0/0:63.0025:14:14:514:0:0:0,-4.21442,-10 0/0:56.9819:12:12:436:0:0:0,-3.61236,-10 0/0:81.0642:20:20:735:0:0:0,-6.0206,-10 0/0:44.9407:8:8:290:0:0:0,-2.40824,-10 0/0:63.0025:14:14:502:0:0:0,-4.21442,-10 0/0:93.1034:24:24:900:0:0:0,-7.22472,-10 0/0:75.0437:19:18:675:0:0:0,-5.41854,-10 0/0:47.951:9:9:338:0:0:0,-2.70927,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:47.951:10:9:320:0:0:0,-2.70927,-10 0/0:69.0231:16:16:538:0:0:0,-4.81648,-10 0/0:93.1034:24:24:863:0:0:0,-7.22472,-10 0/0:53.9716:11:11:383:0:0:0,-3.31133,-10 0/0:56.9819:12:12:434:0:0:0,-3.61236,-10 0/0:99:42:42:1506:0:0:0,-10,-10 0/0:72.0334:17:17:636:0:0:0,-5.11751,-10 0/0:63.0025:14:14:470:0:0:0,-4.21442,-10 0/0:99:30:30:1030:0:0:0,-9.0309,-10 0/0:59.9922:13:13:466:0:0:0,-3.91339,-10 0/0:99:33:33:1146:0:0:0,-9.93399,-10 0/0:69.0231:16:16:568:0:0:0,-4.81648,-10 0/0:44.9407:8:8:276:0:0:0,-2.40824,-10 0/0:99:28:28:1052:0:0:0,-8.42884,-10 0/0:50.9613:10:10:355:0:0:0,-3.0103,-10 0/0:56.9819:12:12:436:0:0:0,-3.61236,-10 0/0:44.9407:8:8:302:0:0:0,-2.40824,-10 0/0:69.0231:16:16:589:0:0:0,-4.81648,-10 0/0:63.0025:14:14:528:0:0:0,-4.21442,-10 0/0:99:33:33:1203:0:0:0,-9.93399,-10 0/0:78.054:19:19:669:0:0:0,-5.71957,-10 0/0:99:43:43:1489:0:0:0,-10,-10 0/0:66.0128:15:15:472:0:0:0,-4.51545,-10 0/0:59.9922:13:13:459:0:0:0,-3.91339,-10 0/1:99:33:18:620:15:555:-10,0,-10 0/1:99:21:10:352:11:416:-10,0,-10 0/0:59.9922:13:13:444:0:0:0,-3.91339,-10 0/0:99:45:45:1600:0:0:0,-10,-10 0/0:44.9407:8:8:268:0:0:0,-2.40824,-10 0/0:72.0334:17:17:617:0:0:0,-5.11751,-10 0/0:90.0952:23:23:827:0:0:0,-6.92369,-10 0/0:93.1034:24:24:865:0:0:0,-7.22472,-10 0/0:59.9922:13:13:482:0:0:0,-3.91339,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:0.174844:14:13:459:1:38:-0.731708,0,-10 0/0:72.0334:17:17:613:0:0:0,-5.11751,-10 0/0:69.0231:16:16:571:0:0:0,-4.81648,-10 0/0:41.9304:7:7:266:0:0:0,-2.10721,-10 0/0:63.0025:14:14:514:0:0:0,-4.21442,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:84.0746:21:21:769:0:0:0,-6.32163,-10 0/0:90.0952:23:23:824:0:0:0,-6.92369,-10 0/0:72.0334:17:17:637:0:0:0,-5.11751,-10 0/0:78.054:19:19:681:0:0:0,-5.71957,-10 0/0:50.9613:10:10:361:0:0:0,-3.0103,-10 0/0:59.9922:13:13:478:0:0:0,-3.91339,-10 0/0:56.9819:12:12:435:0:0:0,-3.61236,-10 0/0:26.8789:2:2:76:0:0:0,-0.60206,-7.22 0/0:75.0437:18:18:656:0:0:0,-5.41854,-10 0/0:69.0231:16:16:601:0:0:0,-4.81648,-10 0/0:59.9922:13:13:450:0:0:0,-3.91339,-10 scaffold_101 2265582 . C T 1563.9 . AB=0.479675;ABP=3.45166;AC=4;AF=0.0217391;AN=184;AO=60;CIGAR=1X;DP=1591;DPB=1591;DPRA=1.692;EPP=3.58936;EPPR=5.39452;GTI=0;LEN=1;MEANALT=1;MQM=59.65;MQMR=59.953;NS=92;NUMALT=1;ODDS=1.28928;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2185;QR=55306;RO=1531;RPP=133.299;RPPR=3327.53;RUN=1;SAF=32;SAP=3.58936;SAR=28;SRF=786;SRP=5.39452;SRR=745;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.838:16:16:562:0:0:0,-4.81648,-10 0/0:29.7659:9:9:323:0:0:0,-2.70927,-10 0/0:62.8792:20:20:728:0:0:0,-6.0206,-10 0/0:32.7762:10:10:377:0:0:0,-3.0103,-10 0/0:23.7453:7:7:260:0:0:0,-2.10721,-10 0/0:47.8277:15:15:530:0:0:0,-4.51545,-10 0/0:98.9975:32:32:1123:0:0:0,-9.63296,-10 0/0:74.9204:24:24:844:0:0:0,-7.22472,-10 0/0:38.7968:12:12:427:0:0:0,-3.61236,-10 0/0:11.7041:3:3:111:0:0:0,-0.90309,-10 0/0:20.735:6:6:216:0:0:0,-1.80618,-10 0/0:23.7453:7:7:256:0:0:0,-2.10721,-10 0/0:74.9204:24:24:907:0:0:0,-7.22472,-10 0/0:99:33:33:1177:0:0:0,-9.93399,-10 0/0:89.9712:29:29:1030:0:0:0,-8.72987,-10 0/0:56.8586:18:18:667:0:0:0,-5.41854,-10 0/0:68.8998:22:22:794:0:0:0,-6.62266,-10 0/0:14.7144:4:4:150:0:0:0,-1.20412,-10 0/0:56.8586:18:18:659:0:0:0,-5.41854,-10 0/1:99:46:25:934:21:739:-10,0,-10 0/0:53.8483:17:17:598:0:0:0,-5.11751,-10 0/1:99:36:18:668:18:681:-10,0,-10 0/0:29.7659:9:9:338:0:0:0,-2.70927,-10 0/0:59.8689:19:19:669:0:0:0,-5.71957,-10 0/0:35.7865:11:11:407:0:0:0,-3.31133,-10 0/0:74.9204:24:24:831:0:0:0,-7.22472,-10 0/0:68.8998:22:22:795:0:0:0,-6.62266,-10 0/0:38.7968:12:12:448:0:0:0,-3.61236,-10 0/0:71.9101:23:23:870:0:0:0,-6.92369,-10 0/0:89.9712:29:29:1043:0:0:0,-8.72987,-10 0/0:17.7247:5:5:185:0:0:0,-1.50515,-10 0/0:23.7453:7:7:266:0:0:0,-2.10721,-10 0/0:23.7453:7:7:237:0:0:0,-2.10721,-10 0/0:38.7968:12:12:442:0:0:0,-3.61236,-10 0/0:53.8483:17:17:635:0:0:0,-5.11751,-10 0/0:35.7865:11:11:414:0:0:0,-3.31133,-10 0/0:14.7144:4:4:152:0:0:0,-1.20412,-10 0/1:99:19:11:415:8:300:-10,0,-10 0/0:74.9204:24:24:885:0:0:0,-7.22472,-10 0/0:50.838:16:16:598:0:0:0,-4.81648,-10 0/0:98.9975:32:32:1183:0:0:0,-9.63296,-10 0/0:53.8483:17:17:622:0:0:0,-5.11751,-10 0/0:38.7968:12:12:450:0:0:0,-3.61236,-10 0/1:99:22:10:379:12:431:-10,0,-10 0/0:77.9306:25:25:900:0:0:0,-7.52575,-10 0/0:29.7659:9:9:285:0:0:0,-2.70927,-10 0/0:99:47:47:1676:0:0:0,-10,-10 0/0:32.7762:10:10:369:0:0:0,-3.0103,-10 0/0:44.8174:14:14:476:0:0:0,-4.21442,-10 0/0:86.9613:28:28:960:0:0:0,-8.42884,-10 0/0:32.7762:10:10:354:0:0:0,-3.0103,-10 0/0:99:36:36:1271:0:0:0,-10,-10 0/0:29.7659:9:9:328:0:0:0,-2.70927,-10 0/0:26.7556:8:8:300:0:0:0,-2.40824,-10 0/0:99:38:38:1301:0:0:0,-10,-10 0/0:26.7556:8:8:279:0:0:0,-2.40824,-10 0/0:68.8998:22:22:772:0:0:0,-6.62266,-10 0/0:26.7556:8:8:279:0:0:0,-2.40824,-10 0/0:44.8174:14:14:527:0:0:0,-4.21442,-10 0/0:29.7659:9:9:340:0:0:0,-2.70927,-10 0/0:71.9101:23:23:838:0:0:0,-6.92369,-10 0/0:53.8483:17:17:612:0:0:0,-5.11751,-10 0/0:99:33:33:1225:0:0:0,-9.93399,-10 0/0:53.8483:17:17:587:0:0:0,-5.11751,-10 0/0:47.8277:15:15:514:0:0:0,-4.51545,-10 0/0:59.8689:19:19:669:0:0:0,-5.71957,-10 0/0:38.7968:12:12:444:0:0:0,-3.61236,-10 0/0:23.7453:7:7:261:0:0:0,-2.10721,-10 0/0:99:33:33:1180:0:0:0,-9.93399,-10 0/0:44.8174:14:14:512:0:0:0,-4.21442,-10 0/0:68.8998:22:22:809:0:0:0,-6.62266,-10 0/0:80.941:26:26:916:0:0:0,-7.82678,-10 0/0:59.8689:19:19:687:0:0:0,-5.71957,-10 0/0:59.8689:19:19:661:0:0:0,-5.71957,-10 0/0:15.3:18:17:644:1:34:0,-0.763267,-10 0/0:23.7453:7:7:261:0:0:0,-2.10721,-10 0/0:35.7865:11:11:410:0:0:0,-3.31133,-10 0/0:32.7762:10:10:340:0:0:0,-3.0103,-10 0/0:8.69379:2:2:75:0:0:0,-0.60206,-7.125 0/0:38.7968:12:12:445:0:0:0,-3.61236,-10 0/0:92.9809:30:30:1107:0:0:0,-9.0309,-10 0/0:74.9204:24:24:856:0:0:0,-7.22472,-10 0/0:71.9101:23:23:874:0:0:0,-6.92369,-10 0/0:50.838:16:16:511:0:0:0,-4.81648,-10 0/0:71.9101:23:23:864:0:0:0,-6.92369,-10 0/0:8.69379:2:2:76:0:0:0,-0.60206,-7.22 0/0:59.8689:19:19:683:0:0:0,-5.71957,-10 0/0:47.8277:15:15:554:0:0:0,-4.51545,-10 0/0:20.735:6:6:222:0:0:0,-1.80618,-10 0/0:47.8277:15:15:550:0:0:0,-4.51545,-10 0/0:41.8071:13:13:452:0:0:0,-3.91339,-10 0/0:38.7968:12:12:445:0:0:0,-3.61236,-10 scaffold_101 2414242 . G A 944.453 . AB=0.395833;ABP=12.0581;AC=4;AF=0.0217391;AN=184;AO=39;CIGAR=1X;DP=1736;DPB=1736;DPRA=1.26897;EPP=3.06598;EPPR=3.68721;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9959;NS=92;NUMALT=1;ODDS=7.59323;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1416;QR=62126;RO=1697;RPP=87.6977;RPPR=3653.34;RUN=1;SAF=19;SAP=3.06598;SAR=20;SRF=856;SRP=3.29821;SRR=841;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.0552:10:10:375:0:0:0,-3.0103,-10 0/0:75.1273:17:17:629:0:0:0,-5.11751,-10 0/0:63.0861:13:13:490:0:0:0,-3.91339,-10 0/0:48.0346:8:8:297:0:0:0,-2.40824,-10 0/0:66.0964:14:14:528:0:0:0,-4.21442,-10 0/0:63.0861:13:13:461:0:0:0,-3.91339,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:99:25:25:899:0:0:0,-7.52575,-10 0/0:42.014:6:6:228:0:0:0,-1.80618,-10 0/0:42.014:6:6:221:0:0:0,-1.80618,-10 0/1:2.42617e-05:4:0:0:4:152:-10,-1.20412,0 0/1:99:30:21:776:9:310:-10,0,-10 0/1:99:23:12:438:11:387:-10,0,-10 0/0:99:32:32:1203:0:0:0,-9.63296,-10 0/0:78.1375:18:18:672:0:0:0,-5.41854,-10 0/0:99:32:32:1114:0:0:0,-9.63296,-10 0/0:39.0037:5:5:190:0:0:0,-1.50515,-10 0/0:96.1961:24:24:884:0:0:0,-7.22472,-10 0/0:99:36:36:1348:0:0:0,-10,-10 0/0:66.0964:14:14:488:0:0:0,-4.21442,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 0/0:51.0449:9:9:339:0:0:0,-2.70927,-10 0/0:99:25:25:923:0:0:0,-7.52575,-10 0/0:87.1681:21:21:795:0:0:0,-6.32163,-10 0/0:99:35:35:1319:0:0:0,-10,-10 0/0:72.117:16:16:589:0:0:0,-4.81648,-10 0/0:54.0552:10:10:370:0:0:0,-3.0103,-10 0/0:69.1067:15:15:557:0:0:0,-4.51545,-10 0/0:99:34:34:1226:0:0:0,-10,-10 0/0:51.0449:9:9:336:0:0:0,-2.70927,-10 0/0:32.9831:3:3:112:0:0:0,-0.90309,-10 0/0:87.1681:21:21:727:0:0:0,-6.32163,-10 0/0:57.0655:11:11:388:0:0:0,-3.31133,-10 0/0:90.178:22:22:809:0:0:0,-6.62266,-10 0/0:42.014:6:6:205:0:0:0,-1.80618,-10 0/0:39.0037:5:5:137:0:0:0,-1.50515,-10 0/0:99:33:33:1232:0:0:0,-9.93399,-10 0/0:93.1874:23:23:849:0:0:0,-6.92369,-10 0/0:69.1067:15:15:548:0:0:0,-4.51545,-10 0/0:90.178:22:22:814:0:0:0,-6.62266,-10 0/0:87.1681:21:21:784:0:0:0,-6.32163,-10 0/0:75.1273:17:17:609:0:0:0,-5.11751,-10 0/0:93.1874:23:23:851:0:0:0,-6.92369,-10 0/0:72.117:16:16:588:0:0:0,-4.81648,-10 0/0:54.0552:10:10:380:0:0:0,-3.0103,-10 0/0:99:29:29:1046:0:0:0,-8.72987,-10 0/0:93.1874:23:23:841:0:0:0,-6.92369,-10 0/0:54.0552:10:10:356:0:0:0,-3.0103,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:60.0758:12:12:448:0:0:0,-3.61236,-10 0/0:90.178:22:22:828:0:0:0,-6.62266,-10 0/0:87.1681:21:21:795:0:0:0,-6.32163,-10 0/0:51.0449:9:9:341:0:0:0,-2.70927,-10 0/0:99:44:44:1604:0:0:0,-10,-10 0/0:78.1375:18:18:671:0:0:0,-5.41854,-10 0/0:69.1067:15:15:556:0:0:0,-4.51545,-10 0/0:57.0655:11:11:416:0:0:0,-3.31133,-10 0/0:87.1681:21:21:781:0:0:0,-6.32163,-10 0/0:42.014:6:6:225:0:0:0,-1.80618,-10 0/0:99:30:30:1122:0:0:0,-9.0309,-10 0/0:75.1273:17:17:616:0:0:0,-5.11751,-10 0/0:99:32:32:1209:0:0:0,-9.63296,-10 0/0:66.0964:14:14:505:0:0:0,-4.21442,-10 0/0:57.0655:11:11:368:0:0:0,-3.31133,-10 0/0:99:40:40:1411:0:0:0,-10,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:54.0552:10:10:338:0:0:0,-3.0103,-10 0/0:99:40:40:1505:0:0:0,-10,-10 0/0:42.014:6:6:223:0:0:0,-1.80618,-10 0/0:72.117:16:16:592:0:0:0,-4.81648,-10 0/0:87.1681:21:21:778:0:0:0,-6.32163,-10 0/0:69.1067:15:15:566:0:0:0,-4.51545,-10 0/0:84.158:20:20:685:0:0:0,-6.0206,-10 0/0:81.1478:19:19:677:0:0:0,-5.71957,-10 0/0:45.0243:7:7:259:0:0:0,-2.10721,-10 0/0:72.117:16:16:591:0:0:0,-4.81648,-10 0/0:75.1273:17:17:623:0:0:0,-5.11751,-10 0/0:48.0346:8:8:302:0:0:0,-2.40824,-10 0/0:51.0449:9:9:311:0:0:0,-2.70927,-10 0/1:99:39:25:905:14:529:-10,0,-10 0/0:99:25:25:919:0:0:0,-7.52575,-10 0/0:66.0964:14:14:528:0:0:0,-4.21442,-10 0/0:78.1375:18:18:661:0:0:0,-5.41854,-10 0/0:69.1067:15:15:524:0:0:0,-4.51545,-10 0/0:78.1375:18:18:663:0:0:0,-5.41854,-10 0/0:57.0655:11:11:401:0:0:0,-3.31133,-10 0/0:41.1584:22:21:757:1:38:0,-1.48024,-10 0/0:39.0037:5:5:189:0:0:0,-1.50515,-10 0/0:99:25:25:898:0:0:0,-7.52575,-10 0/0:99:28:28:996:0:0:0,-8.42884,-10 0/0:66.0964:14:14:508:0:0:0,-4.21442,-10 scaffold_101 2414315 . A G 58913 . AB=0.480198;ABP=3.69829;AC=159;AF=0.86413;AN=184;AO=2011;CIGAR=1X;DP=2345;DPB=2345;DPRA=1.06635;EPP=3.14096;EPPR=3.66832;GTI=1;LEN=1;MEANALT=1.02439;MQM=60;MQMR=59.9818;NS=92;NUMALT=1;ODDS=1.36774;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72671;QR=12160;RO=330;RPP=4369.84;RPPR=719.596;RUN=1;SAF=1011;SAP=3.14096;SAR=1000;SRF=160;SRP=3.66832;SRR=170;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:48.4373:16:0:0:16:551:-10,-4.81648,0 1/1:72.5197:24:0:0:24:882:-10,-7.22472,0 1/1:45.427:15:0:0:15:534:-10,-4.51545,0 1/1:57.4682:19:0:0:19:683:-10,-5.71957,0 0/0:26.1243:20:19:706:0:0:0,-5.71957,-10 0/0:32.1449:21:21:792:0:0:0,-6.32163,-10 0/0:99:48:48:1739:0:0:0,-10,-10 1/1:99:38:0:0:38:1327:-10,-10,0 0/0:23.114:18:18:681:0:0:0,-5.41854,-10 1/1:15.324:5:0:0:5:186:-10,-1.50515,0 0/0:20.1037:17:17:624:0:0:0,-5.11751,-10 1/1:36.3961:12:0:0:12:421:-10,-3.61236,0 0/1:99:63:38:1385:25:878:-10,0,-10 0/1:99:40:17:618:23:858:-10,0,-10 1/1:99:40:0:0:40:1495:-10,-10,0 0/1:99:26:11:417:15:519:-10,0,-10 0/0:50.2067:27:27:975:0:0:0,-8.12781,-10 0/0:17.0934:16:16:599:0:0:0,-4.81648,-10 0/1:99:28:13:489:15:529:-10,0,-10 1/1:87.571:29:0:0:29:1089:-10,-8.72987,0 1/1:48.4373:16:0:0:16:603:-10,-4.81648,0 1/1:99:51:0:0:51:1891:-10,-10,0 1/1:51.4476:17:0:0:17:626:-10,-5.11751,0 1/1:78.5403:26:0:0:26:949:-10,-7.82678,0 1/1:99:33:0:0:33:1181:-10,-9.93399,0 1/1:54.4579:18:0:0:18:645:-10,-5.41854,0 1/1:54.4579:18:0:0:18:653:-10,-5.41854,0 1/1:54.4579:18:0:0:18:642:-10,-5.41854,0 1/1:72.5197:24:0:0:24:874:-10,-7.22472,0 1/1:99:42:0:0:42:1524:-10,-10,0 1/1:57.4682:19:0:0:19:677:-10,-5.71957,0 1/1:45.427:15:0:0:15:554:-10,-4.51545,0 1/1:78.5403:26:0:0:26:885:-10,-7.82678,0 1/1:27.3652:9:0:0:9:324:-10,-2.70927,0 1/1:69.5094:23:0:0:23:852:-10,-6.92369,0 1/1:30.3755:10:0:0:10:355:-10,-3.0103,0 1/1:54.4579:18:0:0:18:676:-10,-5.41854,0 1/1:99:34:0:0:33:1188:-10,-9.93399,0 1/1:84.5608:28:0:0:28:1013:-10,-8.42884,0 1/1:81.5505:27:0:0:27:1006:-10,-8.12781,0 1/1:99:43:0:0:43:1569:-10,-10,0 1/1:63.4888:21:0:0:21:743:-10,-6.32163,0 1/1:87.571:29:0:0:29:1041:-10,-8.72987,0 1/1:93.5909:31:0:0:31:1089:-10,-9.33193,0 1/1:48.4373:16:0:0:16:595:-10,-4.81648,0 1/1:90.5811:30:0:0:30:1134:-10,-9.0309,0 1/1:99:49:0:0:49:1727:-10,-10,0 1/1:81.5505:27:0:0:27:1008:-10,-8.12781,0 1/1:33.3858:11:0:0:11:403:-10,-3.31133,0 1/1:99:63:0:0:63:2209:-10,-10,0 1/1:75.53:25:0:0:25:864:-10,-7.52575,0 1/1:99:38:0:0:38:1400:-10,-10,0 1/1:60.4785:20:0:0:20:702:-10,-6.0206,0 1/1:18.3343:6:0:0:6:228:-10,-1.80618,0 1/1:99:47:0:0:47:1730:-10,-10,0 1/1:45.427:15:0:0:15:555:-10,-4.51545,0 1/1:87.571:29:0:0:29:1019:-10,-8.72987,0 1/1:54.4579:18:0:0:18:674:-10,-5.41854,0 1/1:66.4991:22:0:0:22:738:-10,-6.62266,0 1/1:24.3549:8:0:0:8:294:-10,-2.40824,0 0/0:83.3199:38:38:1438:0:0:0,-10,-10 1/1:66.4991:22:0:0:22:822:-10,-6.62266,0 1/1:99:41:0:0:41:1463:-10,-10,0 0/0:8.06251:13:13:447:0:0:0,-3.91339,-10 1/1:42.4167:14:0:0:14:531:-10,-4.21442,0 1/1:99:35:0:0:35:1253:-10,-10,0 1/1:93.5909:31:0:0:31:1151:-10,-9.33193,0 1/1:12.3137:4:0:0:4:137:-10,-1.20412,0 1/1:99:41:0:0:41:1486:-10,-10,0 1/1:45.427:15:0:0:15:537:-10,-4.51545,0 1/1:81.5505:27:0:0:27:984:-10,-8.12781,0 1/1:90.5811:30:0:0:30:1082:-10,-9.0309,0 1/1:99:34:0:0:34:1238:-10,-10,0 1/1:48.4373:16:0:0:16:602:-10,-4.81648,0 1/1:99:39:0:0:39:1395:-10,-10,0 1/1:45.427:15:0:0:15:567:-10,-4.51545,0 1/1:84.5608:28:0:0:28:978:-10,-8.42884,0 1/1:51.4476:17:0:0:17:599:-10,-5.11751,0 1/1:12.3137:4:0:0:4:152:-10,-1.20412,0 1/1:45.427:15:0:0:15:512:-10,-4.51545,0 1/1:99:45:0:0:45:1622:-10,-10,0 1/1:99:37:0:0:36:1284:-10,-10,0 1/1:99:43:0:0:43:1608:-10,-10,0 1/1:93.5909:31:0:0:31:1144:-10,-9.33193,0 0/1:99:21:10:370:11:393:-10,0,-10 0/1:0.105709:9:8:300:0:0:0,-2.40824,-10 1/1:78.5403:26:0:0:26:899:-10,-7.82678,0 1/1:69.5094:23:0:0:23:821:-10,-6.92369,0 1/1:36.3961:12:0:0:12:443:-10,-3.61236,0 0/1:99:24:16:580:8:280:-10,0,-10 1/1:81.5505:27:0:0:27:965:-10,-8.12781,0 1/1:78.5403:26:0:0:26:931:-10,-7.82678,0 scaffold_101 2517549 . C T 9242.98 . AB=0.528037;ABP=4.47148;AC=31;AF=0.168478;AN=184;AO=339;CIGAR=1X;DP=2081;DPB=2081;DPRA=0.964308;EPP=23.8218;EPPR=3.72831;GTI=2;LEN=1;MEANALT=1;MQM=59.9499;MQMR=59.9925;NS=92;NUMALT=1;ODDS=0.357662;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12363;QR=63422;RO=1742;RPP=739.139;RPPR=3768.36;RUN=1;SAF=198;SAP=23.8218;SAR=141;SRF=861;SRP=3.50892;SRR=881;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:87.8142:27:27:982:0:0:0,-8.12781,-10 0/1:0.00872612:5:0:0:5:186:-10,-1.50515,0 1/1:37.6079:22:0:0:22:769:-10,-6.62266,0 1/1:25.5667:18:0:0:18:645:-10,-5.41854,0 0/0:60.7222:18:18:684:0:0:0,-5.41854,-10 0/0:39.6501:11:11:367:0:0:0,-3.31133,-10 0/0:99:51:51:1890:0:0:0,-10,-10 0/1:99:26:11:401:15:515:-10,0,-10 0/0:69.753:21:21:770:0:0:0,-6.32163,-10 0/0:24.5986:6:6:225:0:0:0,-1.80618,-10 0/0:24.5986:6:6:223:0:0:0,-1.80618,-10 0/0:24.5986:6:6:228:0:0:0,-1.80618,-10 0/0:90.8239:28:28:1026:0:0:0,-8.42884,-10 0/0:99:35:35:1273:0:0:0,-10,-10 0/1:99:24:14:518:10:378:-10,0,-10 0/0:41.1261:24:23:842:1:25:0,-3.34451,-10 0/0:42.6604:12:12:446:0:0:0,-3.61236,-10 0/0:27.6089:7:7:250:0:0:0,-2.10721,-10 0/0:51.6913:15:15:530:0:0:0,-4.51545,-10 0/0:99:45:45:1662:0:0:0,-10,-10 0/0:63.7325:19:19:709:0:0:0,-5.71957,-10 0/0:99:37:37:1349:0:0:0,-10,-10 0/0:24.5986:6:6:222:0:0:0,-1.80618,-10 0/0:87.8142:27:27:995:0:0:0,-8.12781,-10 0/0:75.7736:23:23:817:0:0:0,-6.92369,-10 0/0:78.7839:24:24:803:0:0:0,-7.22472,-10 0/0:87.8142:27:27:1006:0:0:0,-8.12781,-10 0/0:66.7427:20:20:728:0:0:0,-6.0206,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/0:99:33:33:1178:0:0:0,-9.93399,-10 0/0:24.5986:6:6:228:0:0:0,-1.80618,-10 0/0:30.6192:8:8:275:0:0:0,-2.40824,-10 0/0:75.7736:23:23:861:0:0:0,-6.92369,-10 0/0:39.6501:11:11:372:0:0:0,-3.31133,-10 0/0:84.8042:26:26:925:0:0:0,-7.82678,-10 0/0:30.6192:8:8:290:0:0:0,-2.40824,-10 0/0:33.6295:9:9:276:0:0:0,-2.70927,-10 0/0:99:40:40:1501:0:0:0,-10,-10 0/0:93.8353:29:29:1043:0:0:0,-8.72987,-10 0/0:60.7222:18:18:661:0:0:0,-5.41854,-10 0/0:99:40:40:1431:0:0:0,-10,-10 0/0:42.6604:12:12:422:0:0:0,-3.61236,-10 0/0:63.7325:19:19:706:0:0:0,-5.71957,-10 0/0:99:48:48:1727:0:0:0,-10,-10 0/0:81.7941:25:25:921:0:0:0,-7.52575,-10 0/0:78.7839:24:24:860:0:0:0,-7.22472,-10 0/0:99:64:64:2355:0:0:0,-10,-10 0/0:99:39:39:1447:0:0:0,-10,-10 0/1:6.41485:16:15:569:1:38:-0.18764,0,-10 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:33.6295:9:9:309:0:0:0,-2.70927,-10 0/0:99:41:41:1438:0:0:0,-10,-10 0/0:60.7222:18:18:677:0:0:0,-5.41854,-10 0/0:39.6501:11:11:393:0:0:0,-3.31133,-10 0/0:99:55:55:1999:0:0:0,-10,-10 0/0:48.681:14:14:516:0:0:0,-4.21442,-10 0/0:22.624:21:20:744:1:38:0,-1.19941,-10 0/0:24.5986:6:6:206:0:0:0,-1.80618,-10 0/0:63.7325:19:19:652:0:0:0,-5.71957,-10 0/0:30.6192:8:8:304:0:0:0,-2.40824,-10 0/0:99:32:32:1163:0:0:0,-9.63296,-10 1/1:37.6079:22:0:0:22:761:-10,-6.62266,0 0/0:99:59:59:2159:0:0:0,-10,-10 0/0:84.8042:26:26:969:0:0:0,-7.82678,-10 0/0:57.7119:17:17:639:0:0:0,-5.11751,-10 1/1:42.6553:33:1:16:32:1180:-10,-6.81548,0 0/0:45.6707:13:13:460:0:0:0,-3.91339,-10 0/0:24.5986:6:6:206:0:0:0,-1.80618,-10 0/1:99:44:23:859:21:770:-10,0,-10 0/0:36.6398:10:10:361:0:0:0,-3.0103,-10 0/0:72.7634:22:22:811:0:0:0,-6.62266,-10 0/0:90.8239:28:28:1024:0:0:0,-8.42884,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:69.753:21:21:773:0:0:0,-6.32163,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:33.6295:9:9:306:0:0:0,-2.70927,-10 1/1:28.577:19:0:0:19:679:-10,-5.71957,0 0/0:36.6398:10:10:354:0:0:0,-3.0103,-10 1/1:7.50493:12:0:0:12:450:-10,-3.61236,0 1/1:7.50493:12:0:0:12:455:-10,-3.61236,0 0/1:99:35:11:389:24:868:-10,0,-10 1/1:61.6903:30:0:0:30:1095:-10,-9.0309,0 0/1:99:34:16:586:18:660:-10,0,-10 0/1:99:23:11:412:12:451:-10,0,-10 0/0:99:39:39:1420:0:0:0,-10,-10 0/0:15.5677:3:3:107:0:0:0,-0.90309,-9.98667 0/0:72.7634:22:22:835:0:0:0,-6.62266,-10 0/0:42.6604:12:12:433:0:0:0,-3.61236,-10 0/1:0.0350102:7:0:0:7:261:-10,-2.10721,0 1/1:22.5564:17:0:0:17:641:-10,-5.11751,0 1/1:22.5564:17:0:0:17:627:-10,-5.11751,0 1/1:40.6182:23:0:0:23:871:-10,-6.92369,0 scaffold_101 2517560 . C A 2036.3 . AB=0.611111;ABP=16.5217;AC=6;AF=0.0326087;AN=184;AO=77;CIGAR=1X;DP=2081;DPB=2081;DPRA=0.923785;EPP=6.42261;EPPR=5.30542;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.985;NS=92;NUMALT=1;ODDS=5.13064;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2824;QR=71957;RO=2002;RPP=170.214;RPPR=4350.3;RUN=1;SAF=33;SAP=6.42261;SAR=44;SRF=1024;SRP=5.30542;SRR=978;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:96.7969:27:27:991:0:0:0,-8.12781,-10 0/0:30.5692:5:5:189:0:0:0,-1.50515,-10 0/0:81.7442:22:22:819:0:0:0,-6.62266,-10 0/0:69.7031:18:18:661:0:0:0,-5.41854,-10 0/1:99:18:8:298:10:369:-10,0,-10 0/0:48.631:11:11:355:0:0:0,-3.31133,-10 0/0:99:51:51:1856:0:0:0,-10,-10 0/0:93.7837:26:26:900:0:0:0,-7.82678,-10 0/0:78.7341:21:21:750:0:0:0,-6.32163,-10 0/0:33.5795:6:6:228:0:0:0,-1.80618,-10 0/0:33.5795:6:6:219:0:0:0,-1.80618,-10 0/0:33.5795:6:6:228:0:0:0,-1.80618,-10 0/0:99:28:28:1034:0:0:0,-8.42884,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:87.7645:24:24:911:0:0:0,-7.22472,-10 0/0:87.7645:24:24:836:0:0:0,-7.22472,-10 0/0:51.6413:12:12:429:0:0:0,-3.61236,-10 0/0:36.5898:7:7:264:0:0:0,-2.10721,-10 0/0:60.6722:15:15:522:0:0:0,-4.51545,-10 0/0:99:45:45:1598:0:0:0,-10,-10 0/0:72.7134:19:19:701:0:0:0,-5.71957,-10 0/0:99:37:37:1294:0:0:0,-10,-10 0/0:33.5795:6:6:219:0:0:0,-1.80618,-10 0/0:96.7969:27:27:965:0:0:0,-8.12781,-10 0/0:84.7544:23:23:812:0:0:0,-6.92369,-10 0/0:87.7645:24:24:880:0:0:0,-7.22472,-10 0/0:96.7969:27:27:1016:0:0:0,-8.12781,-10 0/0:75.7237:20:20:746:0:0:0,-6.0206,-10 0/0:99:31:31:1083:0:0:0,-9.33193,-10 0/0:99:33:33:1161:0:0:0,-9.93399,-10 0/0:33.5795:6:6:228:0:0:0,-1.80618,-10 0/0:39.6001:8:8:274:0:0:0,-2.40824,-10 0/0:84.7544:23:23:841:0:0:0,-6.92369,-10 0/0:48.631:11:11:401:0:0:0,-3.31133,-10 0/0:93.7837:26:26:899:0:0:0,-7.82678,-10 0/0:39.6001:8:8:303:0:0:0,-2.40824,-10 0/0:42.6104:9:9:311:0:0:0,-2.70927,-10 0/0:99:40:40:1464:0:0:0,-10,-10 0/0:99:29:29:1029:0:0:0,-8.72987,-10 0/0:69.7031:18:18:611:0:0:0,-5.41854,-10 0/0:99:40:40:1465:0:0:0,-10,-10 0/0:51.6413:12:12:414:0:0:0,-3.61236,-10 0/0:72.7134:19:19:713:0:0:0,-5.71957,-10 0/0:99:48:47:1666:0:0:0,-10,-10 0/0:90.7743:25:25:897:0:0:0,-7.52575,-10 0/0:87.7645:24:24:840:0:0:0,-7.22472,-10 0/0:99:64:64:2291:0:0:0,-10,-10 0/0:99:39:39:1408:0:0:0,-10,-10 0/0:63.6825:16:16:547:0:0:0,-4.81648,-10 0/0:99:35:35:1276:0:0:0,-10,-10 0/0:42.6104:9:9:336:0:0:0,-2.70927,-10 0/0:99:41:41:1428:0:0:0,-10,-10 0/0:69.7031:18:18:641:0:0:0,-5.41854,-10 0/0:48.631:11:11:413:0:0:0,-3.31133,-10 0/0:99:55:55:1993:0:0:0,-10,-10 0/0:57.6619:14:14:495:0:0:0,-4.21442,-10 0/0:78.7341:21:21:777:0:0:0,-6.32163,-10 0/0:30.5692:6:5:167:0:0:0,-1.50515,-10 0/0:72.7134:19:19:659:0:0:0,-5.71957,-10 0/0:39.6001:8:8:303:0:0:0,-2.40824,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:81.7442:22:22:788:0:0:0,-6.62266,-10 0/0:99:59:59:2049:0:0:0,-10,-10 0/0:93.7837:26:26:884:0:0:0,-7.82678,-10 0/0:66.6928:17:17:640:0:0:0,-5.11751,-10 0/0:99:33:33:1166:0:0:0,-9.93399,-10 0/0:54.6516:13:13:452:0:0:0,-3.91339,-10 0/1:0.0015771:6:0:0:6:206:-10,-1.80618,0 0/1:99:44:21:712:23:852:-10,0,-10 0/1:0.0253026:10:0:0:10:368:-10,-3.0103,0 0/0:81.7442:22:22:809:0:0:0,-6.62266,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:99:31:31:1116:0:0:0,-9.33193,-10 0/0:78.7341:21:21:752:0:0:0,-6.32163,-10 0/0:99:37:37:1363:0:0:0,-10,-10 0/1:0.0126329:9:0:0:9:340:-10,-2.70927,0 0/0:72.7134:19:19:667:0:0:0,-5.71957,-10 0/0:45.6207:10:10:332:0:0:0,-3.0103,-10 0/0:51.6413:12:12:441:0:0:0,-3.61236,-10 0/0:51.6413:12:12:422:0:0:0,-3.61236,-10 0/0:99:35:35:1240:0:0:0,-10,-10 0/0:99:30:30:1028:0:0:0,-9.0309,-10 0/0:99:34:34:1235:0:0:0,-10,-10 0/0:84.7544:23:23:856:0:0:0,-6.92369,-10 0/1:99:39:20:724:19:689:-10,0,-10 0/0:24.5486:3:3:109:0:0:0,-0.90309,-10 0/0:81.7442:22:22:833:0:0:0,-6.62266,-10 0/0:51.6413:12:12:446:0:0:0,-3.61236,-10 0/0:36.5898:7:7:262:0:0:0,-2.10721,-10 0/0:66.6928:17:17:620:0:0:0,-5.11751,-10 0/0:66.6928:17:17:601:0:0:0,-5.11751,-10 0/0:84.7544:23:23:845:0:0:0,-6.92369,-10 scaffold_101 2523746 . CCTCAG C 18278.6 . AB=0.521739;ABP=4.04883;AC=64;AF=0.347826;AN=184;AO=712;CIGAR=1M5D11M;DP=1959;DPB=1749.06;DPRA=1.19873;EPP=3.12009;EPPR=6.03453;GTI=4;LEN=5;MEANALT=1.27027;MQM=38.8469;MQMR=59.9519;NS=92;NUMALT=1;ODDS=0.522418;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=11;PQR=48;PRO=1.5;QA=23831;QR=43678;RO=1207;RPP=1549.1;RPPR=2623.98;RUN=1;SAF=359;SAP=3.12009;SAR=353;SRF=583;SRP=6.03453;SRR=624;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:42.97:17:17:620:0:0:0,-5.11751,-10 0|0:36.9494:17:15:552:0:0:0,-4.51545,-10 0|0:33.9391:15:14:501:0:0:0,-4.21442,-10 0|0:24.9082:12:11:403:0:0:0,-3.31133,-10 0|0:21.8979:10:10:367:0:0:0,-3.0103,-10 0|0:21.8979:10:10:370:0:0:0,-3.0103,-10 0|0:99:42:41:1483:0:0:0,-10,-10 0|0:70.0627:28:26:949:0:0:0,-7.82678,-10 0|0:39.9597:16:16:592:0:0:0,-4.81648,-10 0|1:0.105559:1:1:36:0:0:0,-0.30103,-3.6 1|1:16.0345:9:0:0:9:309:-10,-2.70927,0 0|0:15.8773:8:8:294:0:0:0,-2.40824,-10 0|0:64.0421:24:24:851:0:0:0,-7.22472,-10 0|1:99:30:10:366:20:625:-10,0,-10 0|0:76.0834:29:28:1006:0:0:0,-8.42884,-10 0|0:48.9906:20:19:698:0:0:0,-5.71957,-10 0|0:85.1143:33:31:1120:0:0:0,-9.33193,-10 0|0:27.9185:12:12:431:0:0:0,-3.61236,-10 0|1:99:25:13:475:12:389:-10,0,-10 1|1:99:46:0:0:46:1419:-10,-10,0 0|1:99:11:7:252:4:149:-10,0,-10 0|1:99:21:7:261:14:512:-10,0,-10 1|1:22.0551:11:0:0:11:362:-10,-3.31133,0 1|1:52.1581:21:0:0:21:686:-10,-6.32163,0 1|1:52.1581:21:0:0:21:722:-10,-6.32163,0 0|1:99:43:27:968:16:543:-10,0,-10 1|1:46.1375:20:0:0:19:673:-10,-5.71957,0 1|1:13.0242:8:0:0:8:228:-10,-2.40824,0 1|1:55.1684:23:0:0:22:750:-10,-6.62266,0 1|1:99:42:0:0:41:1424:-10,-10,0 0|1:0.438564:3:3:113:0:0:0,-0.90309,-10 0|1:31.8129:12:1:38:11:365:-10,0,-1.26682 0|0:70.0627:27:26:927:0:0:0,-7.82678,-10 1|1:19.0448:10:0:0:10:327:-10,-3.0103,0 0|0:67.0524:25:25:922:0:0:0,-7.52575,-10 0|0:18.8876:9:9:308:0:0:0,-2.70927,-10 0|1:0.208258:3:0:0:3:67:-6.25333,-0.90309,0 0|1:99:21:10:350:11:402:-10,0,-10 0|0:70.0627:26:26:928:0:0:0,-7.82678,-10 0|1:99:16:6:221:9:285:-10,0,-10 1|1:99:41:0:0:41:1388:-10,-10,0 0|0:55.0112:22:21:756:0:0:0,-6.32163,-10 0|0:64.0421:24:24:860:0:0:0,-7.22472,-10 0|1:99:45:24:863:20:650:-10,0,-10 0|1:99:26:14:512:12:403:-10,0,-10 1|1:31.086:14:0:0:14:462:-10,-4.21442,0 1|1:99:53:0:0:53:1855:-10,-10,0 1|1:61.189:24:0:0:24:754:-10,-7.22472,0 1|1:22.0551:12:0:0:11:346:-10,-3.31133,0 1|1:99:54:0:0:52:1724:-10,-10,0 1|1:22.0551:11:0:0:11:382:-10,-3.31133,0 1|1:99:42:0:0:42:1390:-10,-10,0 1|1:16.0345:9:0:0:9:312:-10,-2.70927,0 1|1:31.086:14:0:0:14:520:-10,-4.21442,0 1|1:99:46:0:0:46:1520:-10,-10,0 1|1:25.0654:12:0:0:12:433:-10,-3.61236,0 1|1:28.0757:13:0:0:13:430:-10,-3.91339,0 0|0:21.8979:10:10:334:0:0:0,-3.0103,-10 0|0:58.0215:22:22:798:0:0:0,-6.62266,-10 0|0:39.9597:17:16:576:0:0:0,-4.81648,-10 0|0:88.124:32:32:1173:0:0:0,-9.63296,-10 0|0:27.9185:13:12:426:0:0:0,-3.61236,-10 0|0:99:60:58:2090:1:15:0,-10,-10 0|0:27.9185:14:12:429:0:0:0,-3.61236,-10 0|0:33.9391:14:14:510:0:0:0,-4.21442,-10 0|0:33.9391:16:14:506:0:0:0,-4.21442,-10 0|0:55.0112:21:21:768:0:0:0,-6.32163,-10 0|0:18.8876:9:9:318:0:0:0,-2.70927,-10 0|0:99:51:50:1791:0:0:0,-10,-10 0|0:27.9185:13:12:445:0:0:0,-3.61236,-10 0|0:64.0421:24:24:875:0:0:0,-7.22472,-10 0|0:99:40:40:1467:0:0:0,-10,-10 0|0:76.0834:29:28:1011:0:0:0,-8.42884,-10 0|0:64.0421:24:24:835:0:0:0,-7.22472,-10 0|0:45.9803:19:18:651:0:0:0,-5.41854,-10 0|0:30.9288:13:13:467:0:0:0,-3.91339,-10 0|0:39.9597:16:16:586:0:0:0,-4.81648,-10 0|0:27.9185:12:12:439:0:0:0,-3.61236,-10 0|0:24.9082:11:11:404:0:0:0,-3.31133,-10 0|0:55.0112:21:21:766:0:0:0,-6.32163,-10 0|0:67.0524:28:25:918:0:0:0,-7.52575,-10 0|0:67.0524:26:25:933:0:0:0,-7.52575,-10 0|0:79.0937:31:29:1034:0:0:0,-8.72987,-10 0|0:33.9391:14:14:521:0:0:0,-4.21442,-10 0|0:99:36:36:1302:0:0:0,-10,-10 0|0:6.84645:6:5:180:0:0:0,-1.50515,-10 1|1:37.1066:16:0:0:16:552:-10,-4.81648,0 1|1:28.0757:14:0:0:13:458:-10,-3.91339,0 0|1:0.213749:2:2:76:0:0:0,-0.60206,-7.22 0|0:27.9185:12:12:430:0:0:0,-3.61236,-10 0|0:42.97:17:17:620:0:0:0,-5.11751,-10 0|0:42.97:17:17:606:0:0:0,-5.11751,-10 scaffold_101 2575743 . C T 671.529 . AB=0.433333;ABP=5.32654;AC=2;AF=0.0108696;AN=184;AO=28;CIGAR=1X;DP=2066;DPB=2066;DPRA=1.21348;EPP=10.7656;EPPR=20.221;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9548;NS=92;NUMALT=1;ODDS=7.9701;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=999;QR=74227;RO=2035;RPP=63.8115;RPPR=4413.28;RUN=1;SAF=19;SAP=10.7656;SAR=9;SRF=1082;SRP=20.7673;SRR=953;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.7437:15:15:568:0:0:0,-4.51545,-10 0/0:49.6716:8:8:281:0:0:0,-2.40824,-10 0/0:79.7745:18:18:647:0:0:0,-5.41854,-10 0/0:79.7745:18:18:660:0:0:0,-5.41854,-10 0/0:40.6407:5:5:185:0:0:0,-1.50515,-10 0/0:40.6407:5:5:186:0:0:0,-1.50515,-10 0/0:99:44:44:1605:0:0:0,-10,-10 0/0:99:36:35:1253:0:0:0,-10,-10 0/0:76.7643:17:17:630:0:0:0,-5.11751,-10 0/0:34.6201:3:3:114:0:0:0,-0.90309,-10 0/0:52.6819:9:9:342:0:0:0,-2.70927,-10 0/0:37.6304:4:4:152:0:0:0,-1.20412,-10 0/1:99:42:22:805:20:739:-10,0,-10 0/0:99:30:30:1066:0:0:0,-9.0309,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:99:26:26:936:0:0:0,-7.82678,-10 0/0:85.7953:20:20:744:0:0:0,-6.0206,-10 0/0:49.6716:8:8:302:0:0:0,-2.40824,-10 0/1:99:18:12:451:6:228:-10,0,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:82.7849:19:19:671:0:0:0,-5.71957,-10 0/0:99:42:42:1541:0:0:0,-10,-10 0/0:55.6922:10:10:370:0:0:0,-3.0103,-10 0/0:99:32:32:1144:0:0:0,-9.63296,-10 0/0:99:36:36:1255:0:0:0,-10,-10 0/0:99:35:35:1311:0:0:0,-10,-10 0/0:82.7849:19:19:717:0:0:0,-5.71957,-10 0/0:64.7231:13:13:437:0:0:0,-3.91339,-10 0/0:99:31:31:1122:0:0:0,-9.33193,-10 0/0:99:46:46:1687:0:0:0,-10,-10 0/0:49.6716:8:8:299:0:0:0,-2.40824,-10 0/0:50.2696:16:15:547:1:16:0,-2.01236,-10 0/0:99:31:31:1153:0:0:0,-9.33193,-10 0/0:34.6201:3:3:114:0:0:0,-0.90309,-10 0/0:94.8236:23:23:863:0:0:0,-6.92369,-10 0/0:40.6407:5:5:184:0:0:0,-1.50515,-10 0/0:64.7231:13:13:485:0:0:0,-3.91339,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:97.8374:24:24:912:0:0:0,-7.22472,-10 0/0:88.8049:21:21:758:0:0:0,-6.32163,-10 0/0:99:36:36:1318:0:0:0,-10,-10 0/0:88.8049:21:21:782:0:0:0,-6.32163,-10 0/0:76.7643:17:17:624:0:0:0,-5.11751,-10 0/0:97.8374:24:24:883:0:0:0,-7.22472,-10 0/0:99:40:40:1464:0:0:0,-10,-10 0/0:67.7334:14:14:529:0:0:0,-4.21442,-10 0/0:99:45:45:1612:0:0:0,-10,-10 0/0:88.8049:21:21:775:0:0:0,-6.32163,-10 0/0:76.7643:17:17:618:0:0:0,-5.11751,-10 0/0:99:49:49:1729:0:0:0,-10,-10 0/0:52.6819:9:9:311:0:0:0,-2.70927,-10 0/0:99:42:42:1482:0:0:0,-10,-10 0/0:73.754:16:16:605:0:0:0,-4.81648,-10 0/0:55.6922:10:10:359:0:0:0,-3.0103,-10 0/0:99:35:35:1235:0:0:0,-10,-10 0/0:55.6922:10:10:379:0:0:0,-3.0103,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:40.6407:5:5:180:0:0:0,-1.50515,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:64.7231:13:13:476:0:0:0,-3.91339,-10 0/0:99:26:26:912:0:0:0,-7.82678,-10 0/0:99:25:25:923:0:0:0,-7.52575,-10 0/0:99:34:34:1276:0:0:0,-10,-10 0/0:95.4212:32:31:1131:1:16:0,-6.52781,-10 0/0:70.7437:15:15:544:0:0:0,-4.51545,-10 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:91.8145:22:22:802:0:0:0,-6.62266,-10 0/0:76.7643:17:17:613:0:0:0,-5.11751,-10 0/0:99:40:40:1440:0:0:0,-10,-10 0/0:64.7231:13:13:488:0:0:0,-3.91339,-10 0/0:99:25:25:945:0:0:0,-7.52575,-10 0/0:99:41:41:1500:0:0:0,-10,-10 0/0:99:30:30:1059:0:0:0,-9.0309,-10 0/0:79.7745:18:18:675:0:0:0,-5.41854,-10 0/0:99:42:42:1510:0:0:0,-10,-10 0/0:64.7231:13:13:483:0:0:0,-3.91339,-10 0/0:55.6922:10:10:375:0:0:0,-3.0103,-10 0/0:61.7128:12:12:401:0:0:0,-3.61236,-10 0/0:52.6819:9:9:332:0:0:0,-2.70927,-10 0/0:73.754:17:16:570:0:0:0,-4.81648,-10 0/0:99:42:42:1511:0:0:0,-10,-10 0/0:99:39:39:1390:0:0:0,-10,-10 0/0:99:33:33:1178:0:0:0,-9.93399,-10 0/0:91.8145:22:22:786:0:0:0,-6.62266,-10 0/0:99:25:25:943:0:0:0,-7.52575,-10 0/0:37.6304:4:4:152:0:0:0,-1.20412,-10 0/0:79.7745:18:18:647:0:0:0,-5.41854,-10 0/0:97.8374:24:24:872:0:0:0,-7.22472,-10 0/0:46.6613:7:7:266:0:0:0,-2.10721,-10 0/0:88.8049:21:21:792:0:0:0,-6.32163,-10 0/0:88.8049:22:21:779:0:0:0,-6.32163,-10 0/0:58.7025:11:11:411:0:0:0,-3.31133,-10 scaffold_101 2659396 . G A 2130.76 . AB=0.35;ABP=10.8276;AC=5;AF=0.0268817;AN=186;AO=78;CIGAR=1X;DP=2505;DPB=2505;DPRA=0.994686;EPP=4.79202;EPPR=3.61538;GTI=1;LEN=1;MEANALT=1;MQM=48;MQMR=59.9662;NS=93;NUMALT=1;ODDS=3.39334;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2887;QR=87411;RO=2426;RPP=172.385;RPPR=5262.32;RUN=1;SAF=35;SAP=4.79202;SAR=43;SRF=1201;SRP=3.52587;SRR=1225;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:89.3955:26:25:924:0:0:0,-7.52575,-10 0/0:53.2723:13:13:451:0:0:0,-3.91339,-10 0/0:89.3955:25:25:898:0:0:0,-7.52575,-10 0/0:86.3854:24:24:906:0:0:0,-7.22472,-10 0/0:59.2929:15:15:532:0:0:0,-4.51545,-10 0/0:56.2826:14:14:499:0:0:0,-4.21442,-10 1/1:99:63:0:0:63:2348:-10,-10,0 0/0:99:44:44:1597:0:0:0,-10,-10 0/0:59.2929:15:15:557:0:0:0,-4.51545,-10 0/0:35.2105:7:7:227:0:0:0,-2.10721,-10 0/0:56.2826:14:14:508:0:0:0,-4.21442,-10 0/0:32.2002:6:6:204:0:0:0,-1.80618,-10 0/0:99:51:51:1842:0:0:0,-10,-10 0/0:99:56:56:2004:0:0:0,-10,-10 0/0:99:40:40:1494:0:0:0,-10,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 0/1:99:28:16:599:12:451:-10,0,-10 0/0:80.3649:22:22:803:0:0:0,-6.62266,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:99:59:59:2115:0:0:0,-10,-10 0/0:65.3135:17:17:599:0:0:0,-5.11751,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:50.262:12:12:455:0:0:0,-3.61236,-10 0/0:98.4237:28:28:980:0:0:0,-8.42884,-10 0/0:99:29:29:1026:0:0:0,-8.72987,-10 0/0:99:36:36:1318:0:0:0,-10,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:89.3955:25:25:927:0:0:0,-7.52575,-10 0/0:89.3955:25:25:908:0:0:0,-7.52575,-10 0/0:99:59:59:2133:0:0:0,-10,-10 0/0:38.2208:8:8:293:0:0:0,-2.40824,-10 0/0:23.1693:3:3:114:0:0:0,-0.90309,-10 0/0:92.4054:26:26:910:0:0:0,-7.82678,-10 0/0:74.3443:20:20:728:0:0:0,-6.0206,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/0:44.2414:10:10:351:0:0:0,-3.0103,-10 0/0:35.2105:7:7:236:0:0:0,-2.10721,-10 0/0:80.2506:31:30:1070:1:16:0,-6.24057,-10 0/0:89.3955:25:25:903:0:0:0,-7.52575,-10 0/0:86.3854:24:24:827:0:0:0,-7.22472,-10 0/0:99:54:54:1907:0:0:0,-10,-10 0/0:74.3443:20:20:729:0:0:0,-6.0206,-10 0/0:77.3546:21:21:738:0:0:0,-6.32163,-10 0/0:99:37:37:1343:0:0:0,-10,-10 0/0:99:40:40:1450:0:0:0,-10,-10 0/0:89.3955:25:25:896:0:0:0,-7.52575,-10 0/0:99:67:67:2417:0:0:0,-10,-10 0/0:92.4054:26:26:928:0:0:0,-7.82678,-10 0/0:68.3237:18:18:623:0:0:0,-5.41854,-10 0/0:99:42:42:1439:0:0:0,-10,-10 0/0:53.2723:13:13:487:0:0:0,-3.91339,-10 0/0:99:52:52:1832:0:0:0,-10,-10 0/0:77.3546:21:21:772:0:0:0,-6.32163,-10 0/0:41.2311:9:9:339:0:0:0,-2.70927,-10 0/0:99:59:59:2162:0:0:0,-10,-10 0/0:65.3135:17:17:630:0:0:0,-5.11751,-10 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/0:32.2002:6:6:211:0:0:0,-1.80618,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:65.3135:17:17:638:0:0:0,-5.11751,-10 0/0:99:43:43:1574:0:0:0,-10,-10 0/0:80.3649:22:22:807:0:0:0,-6.62266,-10 0/0:99:50:50:1828:0:0:0,-10,-10 0/0:99:35:35:1266:0:0:0,-10,-10 0/0:59.2929:15:15:527:0:0:0,-4.51545,-10 0/0:99:38:38:1349:0:0:0,-10,-10 0/0:86.3854:24:24:839:0:0:0,-7.22472,-10 0/0:47.2517:11:11:393:0:0:0,-3.31133,-10 0/0:99:41:41:1467:0:0:0,-10,-10 0/1:14.9551:11:10:379:1:34:-1.13006,0,-10 0/0:74.3443:20:20:684:0:0:0,-6.0206,-10 0/0:99:33:33:1245:0:0:0,-9.93399,-10 0/0:99:41:41:1464:0:0:0,-10,-10 0/0:65.3135:17:17:628:0:0:0,-5.11751,-10 0/0:99:48:48:1767:0:0:0,-10,-10 0/0:50.262:12:12:396:0:0:0,-3.61236,-10 0/0:71.3341:19:19:690:0:0:0,-5.71957,-10 0/0:62.3032:16:16:591:0:0:0,-4.81648,-10 0/0:35.2105:7:7:266:0:0:0,-2.10721,-10 0/0:71.3341:19:19:622:0:0:0,-5.71957,-10 0/0:99:41:41:1470:0:0:0,-10,-10 0/0:99:41:41:1404:0:0:0,-10,-10 0/0:99:33:33:1188:0:0:0,-9.93399,-10 0/0:92.4054:26:26:937:0:0:0,-7.82678,-10 0/0:99:32:32:1163:0:0:0,-9.63296,-10 0/0:20.159:2:2:71:0:0:0,-0.60206,-6.745 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:83.3752:23:23:833:0:0:0,-6.92369,-10 0/0:47.2517:11:11:404:0:0:0,-3.31133,-10 0/0:86.3854:24:24:870:0:0:0,-7.22472,-10 0/0:77.3546:21:21:736:0:0:0,-6.32163,-10 0/0:86.3854:24:24:851:0:0:0,-7.22472,-10 scaffold_101 2715890 . C T 87.7455 . AB=0.4;ABP=4.31318;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1X;DP=1665;DPB=1665;DPRA=0.825688;EPP=5.80219;EPPR=8.04476;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9807;NS=92;NUMALT=1;ODDS=10.2301;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=234;QR=60368;RO=1658;RPP=18.2106;RPPR=3603.31;RUN=1;SAF=5;SAP=5.80219;SAR=2;SRF=798;SRP=8.04476;SRR=860;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:86.1863:13:13:484:0:0:0,-3.91339,-10 0/0:99:18:18:658:0:0:0,-5.41854,-10 0/0:99:25:25:877:0:0:0,-7.52575,-10 0/0:74.1452:9:9:342:0:0:0,-2.70927,-10 0/0:83.176:12:12:421:0:0:0,-3.61236,-10 0/0:86.1863:13:13:487:0:0:0,-3.91339,-10 0/0:99:34:34:1220:0:0:0,-10,-10 0/0:99:35:35:1324:0:0:0,-10,-10 0/0:86.1863:13:13:489:0:0:0,-3.91339,-10 0/0:59.0937:4:4:120:0:0:0,-1.20412,-10 0/0:65.1143:6:6:216:0:0:0,-1.80618,-10 0/0:62.104:5:5:179:0:0:0,-1.50515,-10 0/0:99:28:28:1018:0:0:0,-8.42884,-10 0/0:99:30:30:1126:0:0:0,-9.0309,-10 0/0:99:30:30:1103:0:0:0,-9.0309,-10 0/0:99:26:26:939:0:0:0,-7.82678,-10 0/0:99:18:18:656:0:0:0,-5.41854,-10 0/0:83.176:12:12:424:0:0:0,-3.61236,-10 0/0:99:21:21:758:0:0:0,-6.32163,-10 0/0:99:27:27:966:0:0:0,-8.12781,-10 0/0:99:25:25:896:0:0:0,-7.52575,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:74.1452:9:9:340:0:0:0,-2.70927,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:99:20:20:745:0:0:0,-6.0206,-10 0/0:99:19:19:663:0:0:0,-5.71957,-10 0/0:99:19:19:699:0:0:0,-5.71957,-10 0/0:77.1554:10:10:363:0:0:0,-3.0103,-10 0/0:95.2166:16:16:542:0:0:0,-4.81648,-10 0/0:99:29:29:1054:0:0:0,-8.72987,-10 0/0:59.0937:4:4:145:0:0:0,-1.20412,-10 0/0:71.1349:8:8:303:0:0:0,-2.40824,-10 0/0:95.2166:16:16:601:0:0:0,-4.81648,-10 0/0:86.1863:13:13:489:0:0:0,-3.91339,-10 0/0:99:19:19:704:0:0:0,-5.71957,-10 0/0:62.104:5:5:164:0:0:0,-1.50515,-10 0/0:92.2066:15:15:514:0:0:0,-4.51545,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:80.1657:11:11:418:0:0:0,-3.31133,-10 0/0:83.176:12:12:382:0:0:0,-3.61236,-10 0/0:99:29:29:1098:0:0:0,-8.72987,-10 0/0:99:24:24:856:0:0:0,-7.22472,-10 0/0:74.1452:9:9:325:0:0:0,-2.70927,-10 0/0:99:25:25:871:0:0:0,-7.52575,-10 0/0:95.2166:16:16:582:0:0:0,-4.81648,-10 0/0:99:21:21:758:0:0:0,-6.32163,-10 0/0:99:43:43:1613:0:0:0,-10,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:77.1554:10:10:354:0:0:0,-3.0103,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:77.1554:10:10:379:0:0:0,-3.0103,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:89.1965:14:14:515:0:0:0,-4.21442,-10 0/0:59.0937:4:4:140:0:0:0,-1.20412,-10 0/0:99:26:26:911:0:0:0,-7.82678,-10 0/0:89.1965:14:14:512:0:0:0,-4.21442,-10 0/0:89.1965:14:14:492:0:0:0,-4.21442,-10 0/0:92.2066:15:15:544:0:0:0,-4.51545,-10 0/0:95.2166:16:16:571:0:0:0,-4.81648,-10 0/0:86.1863:13:13:461:0:0:0,-3.91339,-10 0/0:99:25:25:937:0:0:0,-7.52575,-10 0/0:89.1965:14:14:514:0:0:0,-4.21442,-10 0/0:99:36:36:1293:0:0:0,-10,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:71.1349:8:8:296:0:0:0,-2.40824,-10 0/0:99:25:25:915:0:0:0,-7.52575,-10 0/0:0.000156633:15:14:506:1:38:-0.460641,0,-10 0/0:92.2066:15:15:546:0:0:0,-4.51545,-10 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:80.1657:11:11:395:0:0:0,-3.31133,-10 0/0:98.2262:17:17:640:0:0:0,-5.11751,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/1:87.7448:15:9:339:6:196:-10,0,-10 0/0:98.2262:17:17:616:0:0:0,-5.11751,-10 0/0:99:29:29:1055:0:0:0,-8.72987,-10 0/0:89.1965:14:14:525:0:0:0,-4.21442,-10 0/0:68.1246:7:7:265:0:0:0,-2.10721,-10 0/0:89.1965:14:14:514:0:0:0,-4.21442,-10 0/0:56.0834:3:3:107:0:0:0,-0.90309,-9.98667 0/0:62.104:5:5:190:0:0:0,-1.50515,-10 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:99:24:24:850:0:0:0,-7.22472,-10 0/0:99:23:23:822:0:0:0,-6.92369,-10 0/0:86.1863:13:13:479:0:0:0,-3.91339,-10 0/0:99:22:22:803:0:0:0,-6.62266,-10 0/0:80.1657:11:11:383:0:0:0,-3.31133,-10 0/0:86.1863:13:13:469:0:0:0,-3.91339,-10 0/0:86.1863:13:13:489:0:0:0,-3.91339,-10 0/0:71.1349:8:8:301:0:0:0,-2.40824,-10 0/0:98.2262:17:17:632:0:0:0,-5.11751,-10 0/0:99:23:23:789:0:0:0,-6.92369,-10 0/0:89.1965:14:14:512:0:0:0,-4.21442,-10 scaffold_101 2715894 . A G 5496.91 . AB=0.518072;ABP=3.71668;AC=20;AF=0.108696;AN=184;AO=202;CIGAR=1X;DP=1661;DPB=1661;DPRA=1.23921;EPP=11.4382;EPPR=5.05062;GTI=1;LEN=1;MEANALT=1.06667;MQM=60;MQMR=59.9787;NS=92;NUMALT=1;ODDS=0.928558;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7404;QR=53164;RO=1457;RPP=441.648;RPPR=3166.85;RUN=1;SAF=87;SAP=11.4382;SAR=115;SRF=710;SRP=5.05062;SRR=747;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.6348:13:13:480:0:0:0,-3.91339,-10 0/0:60.6863:18:18:677:0:0:0,-5.41854,-10 0/0:81.7583:25:25:889:0:0:0,-7.52575,-10 0/0:33.5936:9:9:342:0:0:0,-2.70927,-10 0/0:42.6245:12:12:429:0:0:0,-3.61236,-10 0/0:45.6348:13:13:487:0:0:0,-3.91339,-10 0/0:99:34:33:1198:0:0:0,-9.93399,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:45.6348:13:13:493:0:0:0,-3.91339,-10 0/0:18.5421:4:4:129:0:0:0,-1.20412,-10 0/0:24.5627:6:6:206:0:0:0,-1.80618,-10 0/0:21.5524:5:5:190:0:0:0,-1.50515,-10 0/1:99:28:12:415:16:590:-10,0,-10 0/0:96.8068:30:30:1106:0:0:0,-9.0309,-10 0/0:96.8068:30:30:1108:0:0:0,-9.0309,-10 0/0:84.7685:26:26:943:0:0:0,-7.82678,-10 0/0:60.6863:18:18:652:0:0:0,-5.41854,-10 0/0:42.6245:12:12:451:0:0:0,-3.61236,-10 0/1:99:21:11:404:10:370:-10,0,-10 0/1:99:27:12:453:15:545:-10,0,-10 0/1:99:25:11:403:14:521:-10,0,-10 0/0:84.7685:26:26:934:0:0:0,-7.82678,-10 0/0:33.5936:9:9:333:0:0:0,-2.70927,-10 0/0:78.7481:24:24:903:0:0:0,-7.22472,-10 1/1:37.2104:19:0:0:19:682:-10,-5.71957,0 0/0:63.6966:19:19:680:0:0:0,-5.71957,-10 1/1:34.2001:18:0:0:18:683:-10,-5.41854,0 1/1:7.10744:10:0:0:9:341:-10,-2.70927,0 0/0:54.6657:16:16:588:0:0:0,-4.81648,-10 0/1:99:29:12:430:17:616:-10,0,-10 0/0:18.5421:4:4:145:0:0:0,-1.20412,-10 0/1:0.933139:8:0:0:8:304:-10,-2.40824,0 0/0:54.6657:16:16:584:0:0:0,-4.81648,-10 1/1:19.1486:13:0:0:13:479:-10,-3.91339,0 0/0:63.6966:19:19:680:0:0:0,-5.71957,-10 0/0:21.5524:5:5:158:0:0:0,-1.50515,-10 0/0:51.6554:15:15:522:0:0:0,-4.51545,-10 0/0:99:34:34:1250:0:0:0,-10,-10 0/0:39.6142:11:11:418:0:0:0,-3.31133,-10 0/0:39.6142:11:11:387:0:0:0,-3.31133,-10 0/1:99:29:17:641:12:456:-10,0,-10 0/0:78.7481:24:24:873:0:0:0,-7.22472,-10 0/0:33.5936:9:9:320:0:0:0,-2.70927,-10 0/0:81.7583:25:25:913:0:0:0,-7.52575,-10 0/0:54.6657:16:16:549:0:0:0,-4.81648,-10 0/0:69.7172:21:21:761:0:0:0,-6.32163,-10 0/0:99:43:43:1608:0:0:0,-10,-10 0/0:99:33:33:1225:0:0:0,-9.93399,-10 0/0:36.6039:10:10:376:0:0:0,-3.0103,-10 0/1:99:32:20:747:12:411:-10,0,-10 0/0:36.6039:10:10:368:0:0:0,-3.0103,-10 0/1:99:26:12:433:14:487:-10,0,-10 1/1:22.1589:14:0:0:14:509:-10,-4.21442,0 0/0:18.5421:4:4:145:0:0:0,-1.20412,-10 0/0:84.7685:26:26:949:0:0:0,-7.82678,-10 0/0:48.6451:14:14:481:0:0:0,-4.21442,-10 0/0:48.6451:14:14:465:0:0:0,-4.21442,-10 0/0:51.6554:15:15:503:0:0:0,-4.51545,-10 0/0:54.6657:16:16:603:0:0:0,-4.81648,-10 0/0:45.6348:13:13:484:0:0:0,-3.91339,-10 0/0:81.7583:25:25:928:0:0:0,-7.52575,-10 0/0:48.6451:14:14:479:0:0:0,-4.21442,-10 0/0:99:36:36:1344:0:0:0,-10,-10 0/0:72.7275:22:22:835:0:0:0,-6.62266,-10 0/0:30.5833:8:8:300:0:0:0,-2.40824,-10 0/0:81.7583:25:25:915:0:0:0,-7.52575,-10 0/0:51.6554:15:15:534:0:0:0,-4.51545,-10 0/0:51.6554:15:15:532:0:0:0,-4.51545,-10 0/0:90.7885:28:28:1026:0:0:0,-8.42884,-10 0/0:39.6142:11:11:396:0:0:0,-3.31133,-10 0/0:57.676:17:17:611:0:0:0,-5.11751,-10 0/0:99:34:34:1240:0:0:0,-10,-10 0/0:51.6554:15:15:554:0:0:0,-4.51545,-10 0/0:57.676:17:17:637:0:0:0,-5.11751,-10 0/0:93.7981:29:29:1059:0:0:0,-8.72987,-10 0/0:48.6451:14:14:517:0:0:0,-4.21442,-10 0/0:27.573:7:7:244:0:0:0,-2.10721,-10 0/0:48.6451:14:14:524:0:0:0,-4.21442,-10 0/0:15.5318:3:3:105:0:0:0,-0.90309,-9.8 0/0:21.5524:5:5:190:0:0:0,-1.50515,-10 0/0:75.7378:23:23:861:0:0:0,-6.92369,-10 0/1:99:24:13:471:11:410:-10,0,-10 0/0:75.7378:23:23:841:0:0:0,-6.92369,-10 0/0:45.6348:13:13:481:0:0:0,-3.91339,-10 0/0:72.7275:22:22:821:0:0:0,-6.62266,-10 0/0:39.6142:11:11:382:0:0:0,-3.31133,-10 0/0:45.6348:13:13:479:0:0:0,-3.91339,-10 0/0:45.6348:13:13:487:0:0:0,-3.91339,-10 0/0:30.5833:8:8:282:0:0:0,-2.40824,-10 0/0:54.6657:16:16:576:0:0:0,-4.81648,-10 0/0:75.7378:23:23:794:0:0:0,-6.92369,-10 0/0:48.6451:14:14:509:0:0:0,-4.21442,-10 scaffold_101 2763679 . TCCCTGCTC T 2182.66 . AB=0.634409;ABP=17.6035;AC=7;AF=0.0380435;AN=184;AO=92;CIGAR=1M8D1M;DP=1710;DPB=1637.2;DPRA=1.14015;EPP=3.38795;EPPR=6.56922;GTI=2;LEN=8;MEANALT=1;MQM=59.913;MQMR=59.9824;NS=92;NUMALT=1;ODDS=0.234139;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=16;PQR=54;PRO=1.5;QA=3019;QR=57428;RO=1587;RPP=169.553;RPPR=2711.74;RUN=1;SAF=44;SAP=3.38795;SAR=48;SRF=785;SRP=3.40574;SRR=802;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:29.3981:8:8:266:0:0:0,-2.40824,-10 0|0:41.4393:12:12:440:0:0:0,-3.61236,-10 0|0:59.5011:19:18:658:0:0:0,-5.41854,-10 0|0:56.4908:17:17:620:0:0:0,-5.11751,-10 0|0:26.3878:7:7:233:0:0:0,-2.10721,-10 0|0:26.3878:8:7:258:0:0:0,-2.10721,-10 0|0:77.5629:25:24:863:0:0:0,-7.22472,-10 0|0:98.6339:31:31:1130:0:0:0,-9.33193,-10 0|0:44.4496:13:13:455:0:0:0,-3.91339,-10 0|1:0.0271902:4:0:0:4:141:-10,-1.20412,0 0|0:23.3775:6:6:220:0:0:0,-1.80618,-10 0|0:23.3775:6:6:215:0:0:0,-1.80618,-10 0|0:68.532:21:21:755:0:0:0,-6.32163,-10 0|0:86.5937:27:27:982:0:0:0,-8.12781,-10 0|0:77.5629:27:24:874:0:0:0,-7.22472,-10 0|1:99:21:6:217:15:494:-10,0,-10 0|0:74.5526:23:23:854:0:0:0,-6.92369,-10 0|0:44.4496:13:13:482:0:0:0,-3.91339,-10 0|0:74.5526:23:23:821:0:0:0,-6.92369,-10 0|0:95.6241:30:30:1074:0:0:0,-9.0309,-10 0|0:47.4599:14:14:503:0:0:0,-4.21442,-10 0|0:99:39:39:1437:0:0:0,-10,-10 0|0:41.4393:12:12:414:0:0:0,-3.61236,-10 0|0:65.5217:20:20:739:0:0:0,-6.0206,-10 0|0:62.5114:19:19:676:0:0:0,-5.71957,-10 0|0:99:35:35:1267:0:0:0,-10,-10 0|0:65.5217:20:20:720:0:0:0,-6.0206,-10 0|0:68.532:21:21:777:0:0:0,-6.32163,-10 0|0:50.4702:16:15:558:0:0:0,-4.51545,-10 0|0:95.6241:30:30:1097:0:0:0,-9.0309,-10 0|0:29.3981:8:8:295:0:0:0,-2.40824,-10 0|0:38.429:11:11:403:0:0:0,-3.31133,-10 0|0:62.5114:20:19:680:0:0:0,-5.71957,-10 0|0:53.4805:16:16:575:0:0:0,-4.81648,-10 0|0:41.4393:12:12:434:0:0:0,-3.61236,-10 0|0:29.3981:8:8:278:0:0:0,-2.40824,-10 0|0:44.4496:13:13:466:0:0:0,-3.91339,-10 0|0:68.532:21:21:752:0:0:0,-6.32163,-10 0|0:38.429:11:11:379:0:0:0,-3.31133,-10 0|0:56.4908:17:17:608:0:0:0,-5.11751,-10 0|0:80.5731:26:25:876:0:0:0,-7.52575,-10 0|0:77.5629:27:24:884:0:0:0,-7.22472,-10 0|0:53.4805:17:16:585:0:0:0,-4.81648,-10 0|0:68.532:21:21:739:0:0:0,-6.32163,-10 0|0:65.5217:20:20:718:0:0:0,-6.0206,-10 0|0:56.4908:18:17:607:0:0:0,-5.11751,-10 0|0:99:47:45:1656:0:0:0,-10,-10 0|0:77.5629:24:24:859:0:0:0,-7.22472,-10 0|0:35.4187:10:10:370:0:0:0,-3.0103,-10 0|0:99:35:33:1167:0:0:0,-9.93399,-10 0|0:47.4599:14:14:488:0:0:0,-4.21442,-10 0|0:99:33:33:1176:0:0:0,-9.93399,-10 0|0:47.4599:14:14:492:0:0:0,-4.21442,-10 0|0:26.3878:7:7:259:0:0:0,-2.10721,-10 0|0:80.5731:28:25:891:0:0:0,-7.52575,-10 0|0:44.4496:14:13:490:0:0:0,-3.91339,-10 0|0:77.5629:25:24:877:0:0:0,-7.22472,-10 0|0:14.3466:3:3:102:0:0:0,-0.90309,-9.52 0|0:41.4393:13:12:438:0:0:0,-3.61236,-10 0|1:2.21442:10:0:0:10:286:-10,-3.0103,0 0|0:71.5423:22:22:819:0:0:0,-6.62266,-10 0|0:71.5423:23:22:803:0:0:0,-6.62266,-10 0|1:99:44:19:698:25:856:-10,0,-10 0|1:99:14:9:318:5:142:-10,0,-10 0|0:41.4393:12:12:436:0:0:0,-3.61236,-10 1|1:70.1195:33:0:0:33:1100:-10,-9.93399,0 0|0:83.5835:26:26:955:0:0:0,-7.82678,-10 0|0:35.4187:12:10:338:0:0:0,-3.0103,-10 0|0:98.6339:31:31:1106:0:0:0,-9.33193,-10 0|0:29.3981:8:8:296:0:0:0,-2.40824,-10 0|0:53.4805:16:16:576:0:0:0,-4.81648,-10 0|0:89.604:28:28:1005:0:0:0,-8.42884,-10 0|0:83.5835:27:26:949:0:0:0,-7.82678,-10 0|0:53.4805:16:16:580:0:0:0,-4.81648,-10 0|0:74.5526:23:23:859:0:0:0,-6.92369,-10 0|0:53.4805:16:16:572:0:0:0,-4.81648,-10 0|0:53.4805:16:16:594:0:0:0,-4.81648,-10 0|0:38.429:11:11:386:0:0:0,-3.31133,-10 0|0:26.3878:7:7:261:0:0:0,-2.10721,-10 0|0:35.4187:10:10:369:0:0:0,-3.0103,-10 0|0:95.6241:31:30:1107:0:0:0,-9.0309,-10 0|0:92.6141:29:29:1078:0:0:0,-8.72987,-10 0|0:53.4805:17:16:587:0:0:0,-4.81648,-10 0|0:77.5629:24:24:859:0:0:0,-7.22472,-10 0|0:77.5629:24:24:877:0:0:0,-7.22472,-10 0|0:17.3569:4:4:147:0:0:0,-1.20412,-10 0|0:59.5011:18:18:636:0:0:0,-5.41854,-10 0|0:38.429:11:11:411:0:0:0,-3.31133,-10 0|0:20.3672:5:5:175:0:0:0,-1.50515,-10 0|0:50.4702:15:15:522:0:0:0,-4.51545,-10 0|0:38.429:11:11:405:0:0:0,-3.31133,-10 0|0:50.4702:16:15:555:0:0:0,-4.51545,-10 scaffold_101 2763725 . C T 8018.46 . AB=0.487738;ABP=3.48956;AC=22;AF=0.119565;AN=184;AO=287;CIGAR=1X;DP=2159;DPB=2159;DPRA=1.24692;EPP=9.3734;EPPR=5.79689;GTI=0;LEN=1;MEANALT=1;MQM=59.899;MQMR=59.9743;NS=92;NUMALT=1;ODDS=2.89177;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10575;QR=68313;RO=1871;RPP=626.223;RPPR=3784.26;RUN=1;SAF=158;SAP=9.3734;SAR=129;SRF=983;SRP=13.4847;SRR=888;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.1689:12:12:428:0:0:0,-3.61236,-10 0/0:37.1586:11:11:387:0:0:0,-3.31133,-10 0/0:73.2822:23:23:821:0:0:0,-6.92369,-10 0/0:82.3131:26:26:941:0:0:0,-7.82678,-10 0/0:34.1483:10:10:374:0:0:0,-3.0103,-10 0/0:46.1895:14:14:524:0:0:0,-4.21442,-10 0/0:99:41:41:1520:0:0:0,-10,-10 0/0:99:40:40:1439:0:0:0,-10,-10 0/0:58.2307:18:18:659:0:0:0,-5.41854,-10 0/0:31.138:9:9:338:0:0:0,-2.70927,-10 0/1:63.7087:7:1:38:6:212:-10,0,-2.53789 0/0:22.1071:6:6:213:0:0:0,-1.80618,-10 0/0:99:40:40:1501:0:0:0,-10,-10 0/1:99:30:11:406:19:677:-10,0,-10 0/0:82.3131:26:26:973:0:0:0,-7.82678,-10 0/0:82.3131:26:26:974:0:0:0,-7.82678,-10 0/0:76.2925:24:24:908:0:0:0,-7.22472,-10 0/0:34.1483:10:10:370:0:0:0,-3.0103,-10 0/0:85.3234:27:27:980:0:0:0,-8.12781,-10 0/1:99:43:21:733:22:784:-10,0,-10 0/1:99:27:11:405:16:608:-10,0,-10 0/0:99:47:47:1738:0:0:0,-10,-10 0/0:34.1483:10:10:373:0:0:0,-3.0103,-10 0/1:99:22:9:298:13:479:-10,0,-10 0/0:64.2513:20:20:745:0:0:0,-6.0206,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:61.241:19:19:680:0:0:0,-5.71957,-10 0/0:64.2513:20:20:692:0:0:0,-6.0206,-10 1/1:61.5827:28:0:0:28:1039:-10,-8.42884,0 0/0:99:48:48:1716:0:0:0,-10,-10 0/0:25.1174:7:7:260:0:0:0,-2.10721,-10 0/0:16.0865:4:4:143:0:0:0,-1.20412,-10 0/0:73.2822:23:23:811:0:0:0,-6.92369,-10 0/0:40.1689:12:12:418:0:0:0,-3.61236,-10 0/0:82.3131:26:26:948:0:0:0,-7.82678,-10 0/0:46.1895:14:14:526:0:0:0,-4.21442,-10 0/0:46.1895:14:14:496:0:0:0,-4.21442,-10 0/0:99:36:36:1267:0:0:0,-10,-10 0/0:55.2204:17:17:602:0:0:0,-5.11751,-10 0/1:99:14:8:278:6:228:-10,0,-10 0/1:99:30:20:758:10:370:-10,0,-10 0/0:55.2204:17:17:590:0:0:0,-5.11751,-10 0/0:85.3234:27:27:999:0:0:0,-8.12781,-10 0/0:99:38:38:1429:0:0:0,-10,-10 0/1:99:26:17:628:9:333:-10,0,-10 0/1:99:25:11:408:14:506:-10,0,-10 0/1:99:61:35:1313:26:958:-10,0,-10 0/1:99:32:16:577:16:603:-10,0,-10 1/1:25.4591:16:0:0:16:594:-10,-4.81648,0 0/0:99:48:48:1693:0:0:0,-10,-10 0/0:40.1689:12:12:413:0:0:0,-3.61236,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:28.2465:16:15:546:1:16:0,-2.01236,-10 0/0:28.1277:8:8:271:0:0:0,-2.40824,-10 0/1:99:50:28:1021:22:834:-10,0,-10 1/1:19.4385:14:0:0:14:518:-10,-4.21442,0 1/1:55.5621:26:0:0:26:957:-10,-7.82678,0 0/0:46.1895:14:14:529:0:0:0,-4.21442,-10 0/0:55.2204:17:17:644:0:0:0,-5.11751,-10 0/0:28.1277:8:8:303:0:0:0,-2.40824,-10 0/0:99:47:47:1707:0:0:0,-10,-10 0/0:64.2513:20:20:742:0:0:0,-6.0206,-10 0/0:99:35:35:1250:0:0:0,-10,-10 0/0:61.241:19:19:670:0:0:0,-5.71957,-10 0/0:37.1586:11:11:409:0:0:0,-3.31133,-10 0/0:74.5143:40:39:1397:1:38:0,-6.63914,-10 0/0:97.3652:31:31:1158:0:0:0,-9.33193,-10 0/0:40.1689:12:12:438:0:0:0,-3.61236,-10 0/0:99:48:48:1808:0:0:0,-10,-10 0/0:61.241:19:19:691:0:0:0,-5.71957,-10 0/0:79.3027:25:25:929:0:0:0,-7.52575,-10 0/0:94.3546:30:30:1120:0:0:0,-9.0309,-10 0/0:91.3428:29:29:1075:0:0:0,-8.72987,-10 0/0:76.2925:24:24:908:0:0:0,-7.22472,-10 0/0:99:48:48:1765:0:0:0,-10,-10 0/0:31.138:9:9:337:0:0:0,-2.70927,-10 0/0:49.1998:15:15:512:0:0:0,-4.51545,-10 0/0:58.2307:18:18:663:0:0:0,-5.41854,-10 0/0:37.1586:11:11:400:0:0:0,-3.31133,-10 0/0:34.1483:10:10:354:0:0:0,-3.0103,-10 0/0:99:46:46:1675:0:0:0,-10,-10 0/0:99:36:36:1356:0:0:0,-10,-10 0/0:67.2616:21:21:783:0:0:0,-6.32163,-10 0/0:46.1895:14:14:508:0:0:0,-4.21442,-10 0/0:91.3428:30:29:1067:0:0:0,-8.72987,-10 0/0:22.1071:6:6:226:0:0:0,-1.80618,-10 0/0:49.1998:15:15:536:0:0:0,-4.51545,-10 1/1:43.5209:22:0:0:22:821:-10,-6.62266,0 0/0:13.0762:3:3:114:0:0:0,-0.90309,-10 0/0:67.2616:21:21:767:0:0:0,-6.32163,-10 0/0:55.2204:17:17:574:0:0:0,-5.11751,-10 0/0:70.2719:22:22:830:0:0:0,-6.62266,-10 scaffold_101 3030279 . A G 1471.4 . AB=0.469565;ABP=3.93554;AC=3;AF=0.0163043;AN=184;AO=55;CIGAR=1X;DP=1933;DPB=1933;DPRA=1.83744;EPP=3.36563;EPPR=4.42748;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9691;NS=92;NUMALT=1;ODDS=2.45759;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2043;QR=69189;RO=1877;RPP=122.441;RPPR=3949.62;RUN=1;SAF=29;SAP=3.36563;SAR=26;SRF=910;SRP=6.76902;SRR=967;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:51.0661:17:17:644:0:0:0,-5.11751,-10 0/0:48.0558:16:16:554:0:0:0,-4.81648,-10 0/0:84.1794:28:28:1016:0:0:0,-8.42884,-10 0/0:36.0146:12:12:454:0:0:0,-3.61236,-10 0/0:23.9734:8:8:303:0:0:0,-2.40824,-10 0/0:39.0249:13:13:490:0:0:0,-3.91339,-10 0/0:99:41:41:1464:0:0:0,-10,-10 0/0:53.5692:34:33:1224:1:38:0,-4.90354,-10 0/0:54.0764:18:18:675:0:0:0,-5.41854,-10 0/0:14.9425:5:5:186:0:0:0,-1.50515,-10 0/0:20.9631:7:7:260:0:0:0,-2.10721,-10 0/0:26.9837:9:9:339:0:0:0,-2.70927,-10 0/0:87.1891:29:29:1070:0:0:0,-8.72987,-10 0/0:99:36:36:1323:0:0:0,-10,-10 0/0:90.1988:30:30:1050:0:0:0,-9.0309,-10 0/0:72.1382:24:24:910:0:0:0,-7.22472,-10 0/0:81.1691:27:27:987:0:0:0,-8.12781,-10 0/0:33.0043:11:11:412:0:0:0,-3.31133,-10 0/0:90.1988:30:30:1128:0:0:0,-9.0309,-10 0/1:99:40:20:741:20:760:-10,0,-10 0/0:51.0661:17:17:622:0:0:0,-5.11751,-10 0/1:99:38:23:864:15:557:-10,0,-10 0/0:23.9734:8:8:289:0:0:0,-2.40824,-10 0/0:93.2078:31:31:1148:0:0:0,-9.33193,-10 0/0:51.0661:17:17:620:0:0:0,-5.11751,-10 0/0:69.1279:23:23:854:0:0:0,-6.92369,-10 0/0:57.0867:19:19:707:0:0:0,-5.71957,-10 0/0:36.0146:12:12:429:0:0:0,-3.61236,-10 0/0:84.1794:28:28:1035:0:0:0,-8.42884,-10 0/0:99:40:40:1471:0:0:0,-10,-10 0/0:17.9528:6:6:206:0:0:0,-1.80618,-10 0/0:23.9734:8:8:297:0:0:0,-2.40824,-10 0/0:48.0558:16:16:595:0:0:0,-4.81648,-10 0/0:45.0455:15:15:543:0:0:0,-4.51545,-10 0/0:93.2078:31:31:1150:0:0:0,-9.33193,-10 0/0:17.9528:6:6:228:0:0:0,-1.80618,-10 0/0:42.0352:14:14:522:0:0:0,-4.21442,-10 0/1:99:37:18:679:19:688:-10,0,-10 0/0:51.0661:17:17:646:0:0:0,-5.11751,-10 0/0:45.0455:15:15:558:0:0:0,-4.51545,-10 0/0:96.2156:32:32:1152:0:0:0,-9.63296,-10 0/0:45.0455:15:15:559:0:0:0,-4.51545,-10 0/0:75.1485:25:25:928:0:0:0,-7.52575,-10 0/0:96.2156:32:32:1207:0:0:0,-9.63296,-10 0/0:81.1691:27:27:1015:0:0:0,-8.12781,-10 0/0:36.0146:12:12:454:0:0:0,-3.61236,-10 0/0:99:40:40:1446:0:0:0,-10,-10 0/0:84.1794:28:28:1021:0:0:0,-8.42884,-10 0/0:54.0764:18:18:682:0:0:0,-5.41854,-10 0/0:99:49:49:1814:0:0:0,-10,-10 0/0:48.0558:16:16:576:0:0:0,-4.81648,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/0:54.0764:18:18:654:0:0:0,-5.41854,-10 0/0:17.9528:6:6:227:0:0:0,-1.80618,-10 0/0:99:45:45:1649:0:0:0,-10,-10 0/0:33.0043:11:11:417:0:0:0,-3.31133,-10 0/0:54.0764:18:18:649:0:0:0,-5.41854,-10 0/0:29.994:10:10:364:0:0:0,-3.0103,-10 0/0:42.0352:14:14:491:0:0:0,-4.21442,-10 0/0:39.0249:13:13:494:0:0:0,-3.91339,-10 0/0:75.1485:25:25:902:0:0:0,-7.52575,-10 0/0:45.0455:15:15:557:0:0:0,-4.51545,-10 0/0:99:36:36:1308:0:0:0,-10,-10 0/0:78.1588:26:26:939:0:0:0,-7.82678,-10 0/0:36.0146:12:12:432:0:0:0,-3.61236,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/0:54.0764:18:18:650:0:0:0,-5.41854,-10 0/0:17.9528:6:6:227:0:0:0,-1.80618,-10 0/0:99:44:44:1639:0:0:0,-10,-10 0/0:36.0146:12:12:434:0:0:0,-3.61236,-10 0/0:29.994:10:10:367:0:0:0,-3.0103,-10 0/0:78.1588:26:26:935:0:0:0,-7.82678,-10 0/0:75.1485:25:25:935:0:0:0,-7.52575,-10 0/0:51.0661:17:17:612:0:0:0,-5.11751,-10 0/0:96.2156:32:32:1213:0:0:0,-9.63296,-10 0/0:36.0146:12:12:433:0:0:0,-3.61236,-10 0/0:69.1279:23:23:863:0:0:0,-6.92369,-10 0/0:42.0352:15:14:528:0:0:0,-4.21442,-10 0/0:14.9425:5:5:167:0:0:0,-1.50515,-10 0/0:57.0867:19:19:696:0:0:0,-5.71957,-10 0/0:99:44:44:1612:0:0:0,-10,-10 0/0:72.1382:24:24:880:0:0:0,-7.22472,-10 0/0:66.1176:22:22:816:0:0:0,-6.62266,-10 0/0:78.1588:26:26:962:0:0:0,-7.82678,-10 0/0:51.0661:17:17:644:0:0:0,-5.11751,-10 0/0:11.9322:4:4:151:0:0:0,-1.20412,-10 0/0:54.0764:18:18:679:0:0:0,-5.41854,-10 0/0:17.9528:6:6:228:0:0:0,-1.80618,-10 0/0:17.9528:6:6:228:0:0:0,-1.80618,-10 0/0:39.0249:13:13:482:0:0:0,-3.91339,-10 0/0:66.1176:22:22:822:0:0:0,-6.62266,-10 0/0:72.1382:24:24:905:0:0:0,-7.22472,-10 scaffold_102 320668 . T A 14076.3 . AB=0.491803;ABP=3.18829;AC=55;AF=0.298913;AN=184;AO=481;CIGAR=1X;DP=1542;DPB=1542;DPRA=1.19545;EPP=3.55655;EPPR=4.00368;GTI=4;LEN=1;MEANALT=1.05714;MQM=59.9771;MQMR=60;NS=92;NUMALT=1;ODDS=0.104247;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17650;QR=39086;RO=1058;RPP=743.5;RPPR=1506.9;RUN=1;SAF=237;SAP=3.23151;SAR=244;SRF=515;SRP=4.61941;SRR=543;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:26.7296:8:8:280:0:0:0,-2.40824,-10 0/0:29.7399:9:9:320:0:0:0,-2.70927,-10 0/0:56.8326:18:18:684:0:0:0,-5.41854,-10 0/0:26.7296:8:8:282:0:0:0,-2.40824,-10 0/0:44.7914:14:14:525:0:0:0,-4.21442,-10 0/0:20.709:6:6:206:0:0:0,-1.80618,-10 0/0:92.9557:30:30:1123:0:0:0,-9.0309,-10 0/0:74.8944:24:24:909:0:0:0,-7.22472,-10 0/0:29.7399:9:9:336:0:0:0,-2.70927,-10 0/1:0.733958:2:2:76:0:0:0,-0.60206,-7.22 0/0:23.7193:7:7:266:0:0:0,-2.10721,-10 0/0:14.6884:4:4:152:0:0:0,-1.20412,-10 0/0:71.8841:23:23:872:0:0:0,-6.92369,-10 0/0:99:38:38:1435:0:0:0,-10,-10 0/1:99:18:10:376:8:298:-10,0,-10 0/0:47.8017:15:15:568:0:0:0,-4.51545,-10 0/0:59.8429:19:19:688:0:0:0,-5.71957,-10 0/0:20.709:6:6:222:0:0:0,-1.80618,-10 1/1:60.8526:23:0:0:23:843:-10,-6.92369,0 0/1:99:39:20:730:19:718:-10,0,-10 0/1:99:18:10:342:8:303:-10,0,-10 0/1:99:32:15:545:16:605:-10,0,-10 0/0:38.7708:12:12:450:0:0:0,-3.61236,-10 0/0:32.7502:10:10:380:0:0:0,-3.0103,-10 1/1:36.7702:15:0:0:15:567:-10,-4.51545,0 1/1:42.7908:17:0:0:17:640:-10,-5.11751,0 1/1:21.7187:10:0:0:10:371:-10,-3.0103,0 1/1:33.7599:14:0:0:14:529:-10,-4.21442,0 1/1:33.7599:14:0:0:14:508:-10,-4.21442,0 1/1:54.832:21:0:0:21:714:-10,-6.32163,0 0/1:0.351493:1:1:38:0:0:0,-0.30103,-3.8 0/1:0.403339:5:0:0:5:166:-10,-1.50515,0 1/1:51.8217:20:0:0:20:737:-10,-6.0206,0 0/0:56.8326:18:18:623:0:0:0,-5.41854,-10 1/1:18.7084:9:0:0:9:331:-10,-2.70927,0 0/0:35.7605:11:11:406:0:0:0,-3.31133,-10 1/1:12.6878:7:0:0:7:261:-10,-2.10721,0 0/0:80.915:26:26:950:0:0:0,-7.82678,-10 0/0:38.7708:12:12:434:0:0:0,-3.61236,-10 1/1:27.7393:12:0:0:12:432:-10,-3.61236,0 1/1:63.8629:24:0:0:24:901:-10,-7.22472,0 0/0:14.4213:20:19:662:1:38:0,-0.91957,-10 0/0:80.915:26:26:972:0:0:0,-7.82678,-10 1/1:99:41:0:0:41:1471:-10,-10,0 0/1:99:29:14:510:14:522:-10,0,-10 0/1:77.9583:8:2:71:6:215:-10,0,-5.78392 0/1:99:38:22:833:16:541:-10,0,-10 0/1:99:14:5:190:9:337:-10,0,-10 0/0:47.8017:15:15:566:0:0:0,-4.51545,-10 0/1:99:22:14:525:8:301:-10,0,-10 1/1:30.7496:13:0:0:13:493:-10,-3.91339,0 1/1:99:44:0:0:44:1637:-10,-10,0 1/1:21.7187:10:0:0:10:377:-10,-3.0103,0 1/1:12.6878:7:0:0:7:242:-10,-2.10721,0 0/1:99:46:24:884:22:787:-10,0,-10 0/0:41.7811:13:13:474:0:0:0,-3.91339,-10 0/0:53.8223:17:17:631:0:0:0,-5.11751,-10 0/1:51.2311:4:1:34:3:114:-10,0,-2.79794 0/0:23.7193:7:7:265:0:0:0,-2.10721,-10 0/0:35.7605:11:11:413:0:0:0,-3.31133,-10 0/1:99:21:12:449:9:342:-10,0,-10 0/0:50.812:16:16:599:0:0:0,-4.81648,-10 0/0:99:33:33:1244:0:0:0,-9.93399,-10 0/1:99:11:4:152:7:266:-10,0,-10 0/0:59.8429:19:19:714:0:0:0,-5.71957,-10 0/0:80.915:26:26:949:0:0:0,-7.82678,-10 0/0:41.7811:13:13:470:0:0:0,-3.91339,-10 0/0:28.0962:17:16:607:1:16:0,-2.28706,-10 0/0:95.9654:31:31:1160:0:0:0,-9.33193,-10 0/0:56.8326:18:18:657:0:0:0,-5.41854,-10 0/0:53.8223:17:17:637:0:0:0,-5.11751,-10 0/0:65.8635:22:21:788:0:0:0,-6.32163,-10 0/0:56.8326:18:18:647:0:0:0,-5.41854,-10 0/0:29.7399:9:9:340:0:0:0,-2.70927,-10 0/0:74.8944:24:24:885:0:0:0,-7.22472,-10 0/0:41.7811:13:13:491:0:0:0,-3.91339,-10 0/0:29.7399:9:9:320:0:0:0,-2.70927,-10 0/0:35.7605:11:11:401:0:0:0,-3.31133,-10 0/0:23.7193:7:7:259:0:0:0,-2.10721,-10 0/0:23.7193:7:7:265:0:0:0,-2.10721,-10 0/0:99:33:33:1177:0:0:0,-9.93399,-10 0/0:65.8635:21:21:754:0:0:0,-6.32163,-10 0/0:65.8635:21:21:787:0:0:0,-6.32163,-10 0/0:62.8532:20:20:751:0:0:0,-6.0206,-10 0/0:74.8944:24:24:863:0:0:0,-7.22472,-10 0/0:11.6781:3:3:114:0:0:0,-0.90309,-10 1/1:51.8217:20:0:0:20:723:-10,-6.0206,0 1/1:15.6981:8:0:0:8:304:-10,-2.40824,0 0/1:0.733958:2:2:76:0:0:0,-0.60206,-7.22 0/0:35.7605:11:11:416:0:0:0,-3.31133,-10 0/0:32.7502:10:10:343:0:0:0,-3.0103,-10 0/0:44.7914:14:14:523:0:0:0,-4.21442,-10 scaffold_102 691757 . C T 2061.13 . AB=0.526316;ABP=3.46745;AC=5;AF=0.0271739;AN=184;AO=82;CIGAR=1X;DP=2393;DPB=2393;DPRA=0.92901;EPP=6.82362;EPPR=3.55176;GTI=2;LEN=1;MEANALT=1;MQM=59.7195;MQMR=59.9727;NS=92;NUMALT=1;ODDS=2.80748;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2885;QR=83372;RO=2310;RPP=181.071;RPPR=4932.63;RUN=1;SAF=47;SAP=6.82362;SAR=35;SRF=1133;SRP=4.8302;SRR=1177;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.2462:20:20:707:0:0:0,-6.0206,-10 0/0:54.1844:14:14:479:0:0:0,-4.21442,-10 0/1:99:27:14:518:13:492:-10,0,-10 0/0:72.2462:20:20:729:0:0:0,-6.0206,-10 0/0:42.1432:10:10:380:0:0:0,-3.0103,-10 0/0:57.1947:15:15:556:0:0:0,-4.51545,-10 0/0:99:45:45:1616:0:0:0,-10,-10 0/0:99:29:29:1033:0:0:0,-8.72987,-10 0/0:66.2256:18:18:624:0:0:0,-5.41854,-10 0/0:36.1226:8:8:281:0:0:0,-2.40824,-10 0/0:0.249755:7:6:218:1:16:-0.337888,0,-10 0/1:0.000688483:5:0:0:5:179:-10,-1.50515,0 0/0:99:39:39:1397:0:0:0,-10,-10 0/0:99:32:32:1089:0:0:0,-9.63296,-10 0/0:99:30:30:1124:0:0:0,-9.0309,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:99:29:29:1082:0:0:0,-8.72987,-10 0/0:51.1741:13:13:445:0:0:0,-3.91339,-10 0/0:99:31:31:1132:0:0:0,-9.33193,-10 0/0:99:57:57:2051:0:0:0,-10,-10 0/0:99:29:29:1002:0:0:0,-8.72987,-10 0/0:84.2874:24:24:834:0:0:0,-7.22472,-10 0/0:54.1844:14:14:525:0:0:0,-4.21442,-10 0/0:75.2565:21:21:755:0:0:0,-6.32163,-10 0/0:93.3182:27:27:944:0:0:0,-8.12781,-10 0/0:96.3242:28:28:1000:0:0:0,-8.42884,-10 0/0:63.2153:17:17:616:0:0:0,-5.11751,-10 0/0:90.308:26:26:939:0:0:0,-7.82678,-10 0/0:96.3242:28:28:1023:0:0:0,-8.42884,-10 0/0:99:43:43:1544:0:0:0,-10,-10 0/0:30.102:6:6:201:0:0:0,-1.80618,-10 0/0:66.2256:18:18:631:0:0:0,-5.41854,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:54.1844:14:14:502:0:0:0,-4.21442,-10 0/0:93.3182:27:27:954:0:0:0,-8.12781,-10 0/0:51.1741:13:13:478:0:0:0,-3.91339,-10 0/0:51.1741:13:13:484:0:0:0,-3.91339,-10 0/0:99:41:41:1426:0:0:0,-10,-10 0/0:78.2668:22:22:783:0:0:0,-6.62266,-10 0/0:72.2462:20:20:755:0:0:0,-6.0206,-10 0/0:99:39:39:1428:0:0:0,-10,-10 0/0:75.2565:21:21:791:0:0:0,-6.32163,-10 0/0:81.2771:23:23:803:0:0:0,-6.92369,-10 0/0:99:50:50:1719:0:0:0,-10,-10 0/0:78.3115:31:30:1111:1:16:0,-6.24057,-10 0/0:69.2359:19:19:676:0:0:0,-5.71957,-10 0/0:99:66:66:2405:0:0:0,-10,-10 0/0:99:35:35:1251:0:0:0,-10,-10 0/0:66.2256:18:18:652:0:0:0,-5.41854,-10 0/0:99:57:57:2089:0:0:0,-10,-10 0/0:57.1947:15:15:548:0:0:0,-4.51545,-10 0/0:99:54:54:1953:0:0:0,-10,-10 0/0:57.1947:15:15:563:0:0:0,-4.51545,-10 0/0:44.314:19:18:628:1:16:0,-2.84082,-10 0/0:99:56:56:2014:0:0:0,-10,-10 0/0:75.2565:21:21:727:0:0:0,-6.32163,-10 0/0:99:34:34:1251:0:0:0,-10,-10 0/0:48.1638:12:12:389:0:0:0,-3.61236,-10 0/0:90.308:26:26:913:0:0:0,-7.82678,-10 0/0:45.1535:11:11:414:0:0:0,-3.31133,-10 0/0:99:36:36:1277:0:0:0,-10,-10 1/1:70.1151:37:0:0:37:1352:-10,-10,0 0/0:99:45:45:1650:0:0:0,-10,-10 0/0:63.2153:17:17:594:0:0:0,-5.11751,-10 0/0:60.205:16:16:601:0:0:0,-4.81648,-10 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:87.2977:25:25:900:0:0:0,-7.52575,-10 0/0:51.1741:13:13:489:0:0:0,-3.91339,-10 0/1:99:44:22:808:22:782:-10,0,-10 0/0:66.2256:18:18:659:0:0:0,-5.41854,-10 0/0:87.2977:25:25:922:0:0:0,-7.52575,-10 0/0:99:41:41:1496:0:0:0,-10,-10 0/0:99:34:34:1274:0:0:0,-10,-10 0/0:55.5255:23:22:783:1:16:0,-3.96196,-10 0/0:99:41:41:1469:0:0:0,-10,-10 0/0:78.2668:22:22:832:0:0:0,-6.62266,-10 0/0:78.2668:22:22:836:0:0:0,-6.62266,-10 0/0:90.308:26:26:953:0:0:0,-7.82678,-10 0/0:21.0711:3:3:114:0:0:0,-0.90309,-10 0/0:72.2462:20:20:736:0:0:0,-6.0206,-10 0/0:99:33:33:1207:0:0:0,-9.93399,-10 0/0:99:39:39:1367:0:0:0,-10,-10 0/0:64.0239:26:25:906:1:16:0,-4.81181,-10 0/0:93.3182:28:27:943:0:0:0,-8.12781,-10 0/0:99:37:37:1348:0:0:0,-10,-10 0/0:30.102:6:6:219:0:0:0,-1.80618,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:69.2359:19:19:683:0:0:0,-5.71957,-10 0/0:21.0711:3:3:112:0:0:0,-0.90309,-10 0/0:54.1844:14:14:479:0:0:0,-4.21442,-10 0/0:63.2153:17:17:615:0:0:0,-5.11751,-10 0/0:87.2977:25:25:899:0:0:0,-7.52575,-10 scaffold_102 745798 . C T 79.1653 . AB=0.3125;ABP=7.89611;AC=1;AF=0.00543478;AN=184;AO=5;CIGAR=1X;DP=1436;DPB=1436;DPRA=1.02535;EPP=6.91895;EPPR=4.28648;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9672;NS=92;NUMALT=1;ODDS=11.6698;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=190;QR=52434;RO=1431;RPP=13.8677;RPPR=3110.39;RUN=1;SAF=4;SAP=6.91895;SAR=1;SRF=701;SRP=4.28648;SRR=730;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:86.8049:14:14:529:0:0:0,-4.21442,-10 0/0:89.8151:15:15:552:0:0:0,-4.51545,-10 0/0:99:19:19:722:0:0:0,-5.71957,-10 0/0:74.7637:10:10:369:0:0:0,-3.0103,-10 0/0:86.8049:14:14:527:0:0:0,-4.21442,-10 0/0:62.7225:6:6:221:0:0:0,-1.80618,-10 0/0:99:36:36:1317:0:0:0,-10,-10 0/0:99:24:24:883:0:0:0,-7.22472,-10 0/0:65.7328:7:7:260:0:0:0,-2.10721,-10 0/0:56.7019:4:4:148:0:0:0,-1.20412,-10 0/0:77.774:11:11:414:0:0:0,-3.31133,-10 0/0:68.7431:8:8:296:0:0:0,-2.40824,-10 0/0:99:30:30:1092:0:0:0,-9.0309,-10 0/0:98.8447:18:18:680:0:0:0,-5.41854,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:95.8351:17:17:592:0:0:0,-5.11751,-10 0/0:99:23:23:831:0:0:0,-6.92369,-10 0/0:80.7843:12:12:450:0:0:0,-3.61236,-10 0/0:95.8351:17:17:622:0:0:0,-5.11751,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:83.7946:13:13:481:0:0:0,-3.91339,-10 0/0:99:30:30:1070:0:0:0,-9.0309,-10 0/0:59.7122:5:5:189:0:0:0,-1.50515,-10 0/0:80.7843:12:12:420:0:0:0,-3.61236,-10 0/0:92.8252:16:16:577:0:0:0,-4.81648,-10 0/0:80.7843:12:12:429:0:0:0,-3.61236,-10 0/0:89.8151:15:15:551:0:0:0,-4.51545,-10 0/0:77.774:11:11:418:0:0:0,-3.31133,-10 0/0:99:19:19:691:0:0:0,-5.71957,-10 0/0:99:23:23:796:0:0:0,-6.92369,-10 0/0:80.7843:12:12:449:0:0:0,-3.61236,-10 0/0:68.7431:8:8:304:0:0:0,-2.40824,-10 0/0:71.7534:9:9:316:0:0:0,-2.70927,-10 0/0:86.8049:14:14:519:0:0:0,-4.21442,-10 0/0:99:21:21:752:0:0:0,-6.32163,-10 0/0:62.7225:6:6:226:0:0:0,-1.80618,-10 0/0:59.7122:5:5:190:0:0:0,-1.50515,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:74.7637:10:10:377:0:0:0,-3.0103,-10 0/0:89.8151:15:15:569:0:0:0,-4.51545,-10 0/0:99:22:22:830:0:0:0,-6.62266,-10 0/0:80.7843:12:12:416:0:0:0,-3.61236,-10 0/0:86.8049:14:14:509:0:0:0,-4.21442,-10 0/0:99:23:23:833:0:0:0,-6.92369,-10 0/0:99:19:19:717:0:0:0,-5.71957,-10 0/0:89.8151:15:15:555:0:0:0,-4.51545,-10 0/0:99:24:24:863:0:0:0,-7.22472,-10 0/0:99:19:19:660:0:0:0,-5.71957,-10 0/0:83.7946:13:13:430:0:0:0,-3.91339,-10 0/0:99:28:28:1054:0:0:0,-8.42884,-10 0/0:71.7534:9:9:341:0:0:0,-2.70927,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:74.7637:10:10:380:0:0:0,-3.0103,-10 0/0:68.7431:8:8:277:0:0:0,-2.40824,-10 0/0:99:31:31:1125:0:0:0,-9.33193,-10 0/0:65.7328:7:7:252:0:0:0,-2.10721,-10 0/0:99:22:22:798:0:0:0,-6.62266,-10 0/0:74.7637:10:10:377:0:0:0,-3.0103,-10 0/0:83.7946:13:13:481:0:0:0,-3.91339,-10 0/0:80.7843:12:12:434:0:0:0,-3.61236,-10 0/0:99:25:25:928:0:0:0,-7.52575,-10 0/0:74.7637:10:10:333:0:0:0,-3.0103,-10 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:99:19:19:713:0:0:0,-5.71957,-10 0/0:56.7019:4:4:148:0:0:0,-1.20412,-10 0/0:99:22:22:834:0:0:0,-6.62266,-10 0/0:99:25:25:900:0:0:0,-7.52575,-10 0/0:80.7843:12:12:443:0:0:0,-3.61236,-10 0/0:99:24:24:905:0:0:0,-7.22472,-10 0/0:56.7019:4:4:152:0:0:0,-1.20412,-10 0/0:80.7843:12:12:448:0:0:0,-3.61236,-10 0/0:99:21:21:745:0:0:0,-6.32163,-10 0/1:79.1653:16:11:391:5:190:-10,0,-10 0/0:59.7122:5:5:188:0:0:0,-1.50515,-10 0/0:99:19:19:714:0:0:0,-5.71957,-10 0/0:99:19:19:688:0:0:0,-5.71957,-10 0/0:65.7328:7:7:235:0:0:0,-2.10721,-10 0/0:71.7534:9:9:332:0:0:0,-2.70927,-10 0/0:50.6813:2:2:76:0:0:0,-0.60206,-7.22 0/0:59.7122:5:5:189:0:0:0,-1.50515,-10 0/0:99:22:22:830:0:0:0,-6.62266,-10 0/0:99:24:24:860:0:0:0,-7.22472,-10 0/0:95.8351:17:17:625:0:0:0,-5.11751,-10 0/0:74.7637:10:10:377:0:0:0,-3.0103,-10 0/0:95.8351:17:17:638:0:0:0,-5.11751,-10 0/0:62.7225:6:6:223:0:0:0,-1.80618,-10 0/0:80.7843:12:12:425:0:0:0,-3.61236,-10 0/0:74.7637:10:10:353:0:0:0,-3.0103,-10 0/0:89.8151:15:15:523:0:0:0,-4.51545,-10 0/0:98.8447:18:18:645:0:0:0,-5.41854,-10 0/0:99:20:20:758:0:0:0,-6.0206,-10 0/0:99:21:21:763:0:0:0,-6.32163,-10 scaffold_102 749871 . T TC 603.444 . AB=0.609756;ABP=7.30028;AC=2;AF=0.0108696;AN=184;AO=25;CIGAR=1M1I2M;DP=1721;DPB=1729;DPRA=2.19774;EPP=7.26639;EPPR=18.0329;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=1.48904;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=856;QR=61857;RO=1686;RPP=41.3151;RPPR=2963.03;RUN=1;SAF=11;SAP=3.79203;SAR=14;SRF=808;SRP=9.32122;SRR=878;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:74.1207:18:18:656:0:0:0,-5.41854,-10 0|0:31.9765:4:4:152:0:0:0,-1.20412,-10 0|0:74.1207:18:18:665:0:0:0,-5.41854,-10 0|0:74.1207:18:18:668:0:0:0,-5.41854,-10 0|0:53.0486:11:11:408:0:0:0,-3.31133,-10 0|0:41.0074:7:7:262:0:0:0,-2.10721,-10 0|0:99:35:35:1277:0:0:0,-10,-10 0|0:99:27:27:1010:0:0:0,-8.12781,-10 0|0:56.0589:12:12:445:0:0:0,-3.61236,-10 0|0:25.9559:2:2:73:0:0:0,-0.60206,-6.935 0|1:0.870222:1:1:38:0:0:0,-0.30103,-3.8 0|0:37.9971:6:6:221:0:0:0,-1.80618,-10 0|1:99:41:16:581:25:856:-10,0,-10 0|0:99:30:30:1109:0:0:0,-9.0309,-10 0|0:59.0692:13:13:486:0:0:0,-3.91339,-10 0|0:98.1996:26:26:968:0:0:0,-7.82678,-10 0|0:99:28:28:1038:0:0:0,-8.42884,-10 0|0:41.0074:7:7:263:0:0:0,-2.10721,-10 0|0:80.1413:20:20:725:0:0:0,-6.0206,-10 0|0:89.1718:23:23:864:0:0:0,-6.92369,-10 0|0:80.1413:20:20:746:0:0:0,-6.0206,-10 0|0:99:44:43:1614:0:0:0,-10,-10 0|0:31.9765:4:4:150:0:0:0,-1.20412,-10 0|0:99:27:27:1014:0:0:0,-8.12781,-10 0|0:83.1515:21:21:760:0:0:0,-6.32163,-10 0|0:86.1617:23:22:830:0:0:0,-6.62266,-10 0|0:56.0589:12:12:454:0:0:0,-3.61236,-10 0|0:53.0486:11:11:409:0:0:0,-3.31133,-10 0|0:86.1617:22:22:785:0:0:0,-6.62266,-10 0|0:99:37:37:1373:0:0:0,-10,-10 0|0:47.028:9:9:319:0:0:0,-2.70927,-10 0|0:37.9971:6:6:217:0:0:0,-1.80618,-10 0|0:99:28:27:939:0:0:0,-8.12781,-10 0|0:56.0589:12:12:456:0:0:0,-3.61236,-10 0|0:68.1001:18:16:595:0:0:0,-4.81648,-10 0|0:34.9868:5:5:190:0:0:0,-1.50515,-10 0|0:44.0177:8:8:296:0:0:0,-2.40824,-10 0|0:77.131:19:19:714:0:0:0,-5.71957,-10 0|0:89.1718:23:23:856:0:0:0,-6.92369,-10 0|0:62.0795:14:14:489:0:0:0,-4.21442,-10 0|0:74.1207:19:18:674:0:0:0,-5.41854,-10 0|0:83.1515:21:21:766:0:0:0,-6.32163,-10 0|0:62.0795:14:14:501:0:0:0,-4.21442,-10 0|0:99:46:45:1643:0:0:0,-10,-10 0|0:95.1927:25:25:925:0:0:0,-7.52575,-10 0|0:56.0589:12:12:451:0:0:0,-3.61236,-10 0|0:99:53:53:1946:0:0:0,-10,-10 0|0:86.1617:22:22:816:0:0:0,-6.62266,-10 0|0:50.0383:10:10:379:0:0:0,-3.0103,-10 0|0:99:35:35:1272:0:0:0,-10,-10 0|0:59.0692:13:13:460:0:0:0,-3.91339,-10 0|0:99:36:36:1318:0:0:0,-10,-10 0|0:89.1718:23:23:842:0:0:0,-6.92369,-10 0|0:37.9971:6:6:197:0:0:0,-1.80618,-10 0|0:99:50:50:1739:0:0:0,-10,-10 0|0:83.1515:21:21:783:0:0:0,-6.32163,-10 0|0:56.0589:12:12:437:0:0:0,-3.61236,-10 0|0:31.9765:4:4:151:0:0:0,-1.20412,-10 0|0:53.0486:11:11:411:0:0:0,-3.31133,-10 0|0:53.0486:11:11:389:0:0:0,-3.31133,-10 0|0:99:29:29:1095:0:0:0,-8.72987,-10 0|0:77.131:19:19:705:0:0:0,-5.71957,-10 0|0:77.131:20:19:714:0:0:0,-5.71957,-10 0|0:89.1718:23:23:839:0:0:0,-6.92369,-10 0|0:62.0795:15:14:514:0:0:0,-4.21442,-10 0|0:99:41:41:1504:0:0:0,-10,-10 0|0:74.1207:18:18:647:0:0:0,-5.41854,-10 0|0:56.0589:12:12:446:0:0:0,-3.61236,-10 0|0:99:34:34:1191:0:0:0,-10,-10 0|0:34.9868:5:5:180:0:0:0,-1.50515,-10 0|0:89.1718:23:23:831:0:0:0,-6.92369,-10 0|0:68.1001:16:16:581:0:0:0,-4.81648,-10 0|0:80.1413:20:20:749:0:0:0,-6.0206,-10 0|0:50.0383:11:10:358:0:0:0,-3.0103,-10 0|0:65.0898:15:15:556:0:0:0,-4.51545,-10 0|0:47.028:9:9:333:0:0:0,-2.70927,-10 0|0:59.0692:13:13:464:0:0:0,-3.91339,-10 0|0:59.0692:13:13:489:0:0:0,-3.91339,-10 0|0:25.9559:2:2:76:0:0:0,-0.60206,-7.22 0|0:50.0383:10:10:365:0:0:0,-3.0103,-10 0|0:99:38:38:1376:0:0:0,-10,-10 0|0:86.1617:22:22:801:0:0:0,-6.62266,-10 0|0:86.1617:22:22:813:0:0:0,-6.62266,-10 0|0:89.1718:23:23:842:0:0:0,-6.92369,-10 0|0:99:27:27:980:0:0:0,-8.12781,-10 0|0:22.9456:1:1:37:0:0:0,-0.30103,-3.7 0|0:86.1617:22:22:829:0:0:0,-6.62266,-10 0|0:56.0589:12:12:449:0:0:0,-3.61236,-10 0|0:44.0177:8:8:288:0:0:0,-2.40824,-10 0|0:65.0898:15:15:538:0:0:0,-4.51545,-10 0|0:53.0486:11:11:404:0:0:0,-3.31133,-10 0|0:74.1207:18:18:648:0:0:0,-5.41854,-10 scaffold_102 790035 . G A 1314.68 . AB=0.478261;ABP=3.29354;AC=5;AF=0.0271739;AN=184;AO=52;CIGAR=1X;DP=1681;DPB=1681;DPRA=1.0772;EPP=3.17734;EPPR=3.59816;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.946;NS=92;NUMALT=1;ODDS=0.889994;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1883;QR=59394;RO=1629;RPP=115.927;RPPR=3505.68;RUN=1;SAF=25;SAP=3.17734;SAR=27;SRF=821;SRP=3.23558;SRR=808;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:28.0805:11:10:362:1:15:0,-0.769937,-10 0/0:41.3544:8:8:304:0:0:0,-2.40824,-10 0/0:65.4368:16:16:599:0:0:0,-4.81648,-10 0/0:50.3853:11:11:387:0:0:0,-3.31133,-10 0/0:44.3647:9:9:339:0:0:0,-2.70927,-10 0/0:50.3853:11:11:399:0:0:0,-3.31133,-10 0/0:99:44:44:1580:0:0:0,-10,-10 0/0:83.4985:22:22:826:0:0:0,-6.62266,-10 0/0:59.4162:14:14:502:0:0:0,-4.21442,-10 0/0:32.3235:5:5:164:0:0:0,-1.50515,-10 0/0:44.3647:9:9:315:0:0:0,-2.70927,-10 0/0:53.3956:12:12:452:0:0:0,-3.61236,-10 0/0:99:28:28:1022:0:0:0,-8.42884,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:95.538:26:26:953:0:0:0,-7.82678,-10 0/0:74.4677:19:19:711:0:0:0,-5.71957,-10 0/0:98.5466:27:27:987:0:0:0,-8.12781,-10 0/0:53.3956:12:12:448:0:0:0,-3.61236,-10 0/0:80.4882:21:21:714:0:0:0,-6.32163,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:77.4779:20:20:711:0:0:0,-6.0206,-10 0/0:92.5286:25:25:941:0:0:0,-7.52575,-10 0/0:50.3853:11:11:383:0:0:0,-3.31133,-10 1/1:5.41299:18:0:0:18:667:-10,-5.41854,0 0/0:80.4882:21:21:774:0:0:0,-6.32163,-10 0/0:71.4574:18:18:660:0:0:0,-5.41854,-10 0/0:62.4265:15:15:529:0:0:0,-4.51545,-10 0/0:38.3441:7:7:243:0:0:0,-2.10721,-10 0/0:95.538:26:26:952:0:0:0,-7.82678,-10 0/0:99:33:33:1179:0:0:0,-9.93399,-10 0/0:26.3029:3:3:114:0:0:0,-0.90309,-10 0/0:47.375:10:10:366:0:0:0,-3.0103,-10 0/0:74.4677:19:19:678:0:0:0,-5.71957,-10 0/0:47.375:10:10:358:0:0:0,-3.0103,-10 0/0:65.4368:16:16:600:0:0:0,-4.81648,-10 0/0:29.3132:4:4:152:0:0:0,-1.20412,-10 0/0:56.4059:13:13:472:0:0:0,-3.91339,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:68.4471:17:17:619:0:0:0,-5.11751,-10 0/0:59.4162:14:14:498:0:0:0,-4.21442,-10 0/0:80.4882:21:21:783:0:0:0,-6.32163,-10 0/0:68.4471:17:17:622:0:0:0,-5.11751,-10 0/0:59.4162:14:14:508:0:0:0,-4.21442,-10 0/0:99:37:37:1364:0:0:0,-10,-10 0/1:99:19:10:357:9:327:-10,0,-10 0/0:74.4677:19:19:712:0:0:0,-5.71957,-10 0/0:99:47:47:1689:0:0:0,-10,-10 0/1:99:28:14:474:14:526:-10,0,-10 0/0:59.4162:14:14:527:0:0:0,-4.21442,-10 0/0:99:39:39:1413:0:0:0,-10,-10 0/0:47.375:10:10:375:0:0:0,-3.0103,-10 0/0:99:29:29:1020:0:0:0,-8.72987,-10 0/0:47.375:10:10:351:0:0:0,-3.0103,-10 0/0:23.2926:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:37:37:1326:0:0:0,-10,-10 0/0:77.4779:20:20:732:0:0:0,-6.0206,-10 0/1:99:22:12:436:10:348:-10,0,-10 0/0:44.3647:9:9:305:0:0:0,-2.70927,-10 0/0:62.4265:15:15:564:0:0:0,-4.51545,-10 0/0:71.4574:18:18:644:0:0:0,-5.41854,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:77.4779:20:20:754:0:0:0,-6.0206,-10 0/0:99:35:35:1268:0:0:0,-10,-10 0/0:53.3956:12:12:451:0:0:0,-3.61236,-10 0/0:53.3956:12:12:434:0:0:0,-3.61236,-10 0/0:71.4574:18:18:684:0:0:0,-5.41854,-10 0/0:41.3544:8:8:295:0:0:0,-2.40824,-10 0/0:35.3338:6:6:225:0:0:0,-1.80618,-10 0/0:99:35:35:1303:0:0:0,-10,-10 0/0:35.3338:6:6:228:0:0:0,-1.80618,-10 0/0:74.4677:19:19:699:0:0:0,-5.71957,-10 0/0:68.4471:17:17:620:0:0:0,-5.11751,-10 0/0:83.4985:22:22:809:0:0:0,-6.62266,-10 0/0:74.4677:19:19:710:0:0:0,-5.71957,-10 0/0:99:30:30:1122:0:0:0,-9.0309,-10 0/0:44.3647:9:9:335:0:0:0,-2.70927,-10 0/0:74.4677:19:19:685:0:0:0,-5.71957,-10 0/0:47.375:10:10:365:0:0:0,-3.0103,-10 0/0:38.3441:7:7:243:0:0:0,-2.10721,-10 0/0:53.3956:12:12:440:0:0:0,-3.61236,-10 0/0:99:28:28:1036:0:0:0,-8.42884,-10 0/0:95.538:26:26:939:0:0:0,-7.82678,-10 0/0:95.538:26:26:930:0:0:0,-7.82678,-10 0/0:56.4059:13:13:487:0:0:0,-3.91339,-10 0/0:65.4368:16:16:603:0:0:0,-4.81648,-10 0/0:32.3235:5:5:140:0:0:0,-1.50515,-10 0/0:56.4059:13:13:461:0:0:0,-3.91339,-10 0/0:56.4059:13:13:459:0:0:0,-3.91339,-10 0/0:56.4059:13:13:481:0:0:0,-3.91339,-10 0/0:77.4779:20:20:745:0:0:0,-6.0206,-10 0/0:68.4471:17:17:645:0:0:0,-5.11751,-10 0/0:59.4162:14:14:483:0:0:0,-4.21442,-10 scaffold_102 793541 . G A 317.341 . AB=0.619048;ABP=5.59539;AC=1;AF=0.00543478;AN=184;AO=19;CIGAR=1X;DP=1621;DPB=1621;DPRA=1.42266;EPP=5.8675;EPPR=10.8591;GTI=0;LEN=1;MEANALT=1.14286;MQM=60;MQMR=59.9606;NS=92;NUMALT=1;ODDS=5.88228;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=583;QR=58098;RO=1598;RPP=36.0395;RPPR=3369.58;RUN=1;SAF=6;SAP=8.61041;SAR=13;SRF=825;SRP=6.68468;SRR=773;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:25:25:873:0:0:0,-7.52575,-10 0/0:60.7041:12:12:455:0:0:0,-3.61236,-10 0/0:85.1311:29:27:969:1:16:0,-5.54168,-10 0/0:39.632:5:5:181:0:0:0,-1.50515,-10 0/0:75.7556:17:17:632:0:0:0,-5.11751,-10 0/0:51.6732:9:9:342:0:0:0,-2.70927,-10 0/0:99:36:36:1305:0:0:0,-10,-10 0/0:78.7659:18:18:671:0:0:0,-5.41854,-10 0/0:57.6938:12:11:410:0:0:0,-3.31133,-10 0/0:30.6011:2:2:76:0:0:0,-0.60206,-7.22 0/0:42.6423:6:6:220:0:0:0,-1.80618,-10 0/0:42.6423:6:6:224:0:0:0,-1.80618,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:72.7453:16:16:588:0:0:0,-4.81648,-10 0/0:87.7966:21:21:770:0:0:0,-6.32163,-10 0/0:99:26:26:939:0:0:0,-7.82678,-10 0/0:57.6938:11:11:416:0:0:0,-3.31133,-10 0/0:99:28:28:929:0:0:0,-8.42884,-10 0/0:99:40:39:1450:1:16:0,-8.83914,-10 0/0:66.7247:14:14:454:0:0:0,-4.21442,-10 0/0:96.8213:24:24:893:0:0:0,-7.22472,-10 0/0:48.6629:8:8:282:0:0:0,-2.40824,-10 0/0:84.7864:20:20:724:0:0:0,-6.0206,-10 0/0:96.8213:24:24:886:0:0:0,-7.22472,-10 0/0:90.8055:22:22:782:0:0:0,-6.62266,-10 0/0:66.7247:14:14:487:0:0:0,-4.21442,-10 0/0:25.5746:12:11:403:1:15:0,-1.03318,-10 0/0:72.7453:16:16:545:0:0:0,-4.81648,-10 0/0:99:30:30:1100:0:0:0,-9.0309,-10 0/0:39.632:5:5:175:0:0:0,-1.50515,-10 0/0:36.6217:4:4:152:0:0:0,-1.20412,-10 0/0:75.7556:17:17:613:0:0:0,-5.11751,-10 0/0:54.6835:10:10:326:0:0:0,-3.0103,-10 0/0:81.7762:19:19:663:0:0:0,-5.71957,-10 0/0:45.6526:7:7:236:0:0:0,-2.10721,-10 0/0:57.6938:11:11:389:0:0:0,-3.31133,-10 0/0:93.8142:23:23:839:0:0:0,-6.92369,-10 0/0:51.6732:9:9:325:0:0:0,-2.70927,-10 0/0:66.7247:14:14:522:0:0:0,-4.21442,-10 0/0:99:28:28:1004:0:0:0,-8.42884,-10 0/0:72.7453:16:16:584:0:0:0,-4.81648,-10 0/0:72.7453:16:16:588:0:0:0,-4.81648,-10 0/0:89.2519:30:29:1047:1:16:0,-5.95378,-10 0/0:66.7247:14:14:524:0:0:0,-4.21442,-10 0/0:69.735:15:15:542:0:0:0,-4.51545,-10 0/0:99:39:38:1376:0:0:0,-10,-10 0/0:81.7762:19:19:717:0:0:0,-5.71957,-10 0/0:99:27:27:966:0:0:0,-8.12781,-10 0/0:99:32:32:1119:0:0:0,-9.63296,-10 0/0:60.7041:12:12:450:0:0:0,-3.61236,-10 0/0:99:33:33:1207:0:0:0,-9.93399,-10 0/0:78.7659:18:18:684:0:0:0,-5.41854,-10 0/0:60.7041:12:12:429:0:0:0,-3.61236,-10 0/0:99:38:38:1408:0:0:0,-10,-10 0/0:78.7659:18:18:646:0:0:0,-5.41854,-10 0/0:78.7659:18:18:679:0:0:0,-5.41854,-10 0/0:51.6732:9:9:309:0:0:0,-2.70927,-10 0/0:81.7762:19:19:686:0:0:0,-5.71957,-10 0/0:39.632:5:5:190:0:0:0,-1.50515,-10 0/0:96.8213:24:24:862:0:0:0,-7.22472,-10 0/0:60.7041:12:12:436:0:0:0,-3.61236,-10 0/0:99:25:25:930:0:0:0,-7.52575,-10 0/0:81.7762:19:19:689:0:0:0,-5.71957,-10 0/0:39.632:5:5:190:0:0:0,-1.50515,-10 0/0:93.8142:23:23:837:0:0:0,-6.92369,-10 0/0:66.7247:14:14:516:0:0:0,-4.21442,-10 0/0:57.6938:11:11:390:0:0:0,-3.31133,-10 0/0:81.7762:19:19:710:0:0:0,-5.71957,-10 0/0:63.7144:13:13:468:0:0:0,-3.91339,-10 0/0:72.7453:16:16:568:0:0:0,-4.81648,-10 0/0:99:28:28:1018:0:0:0,-8.42884,-10 0/1:99:21:8:298:13:489:-10,0,-10 0/0:60.7041:13:12:440:0:0:0,-3.61236,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:48.6629:8:8:304:0:0:0,-2.40824,-10 0/0:66.7247:14:14:517:0:0:0,-4.21442,-10 0/0:63.7144:13:13:490:0:0:0,-3.91339,-10 0/0:42.6423:6:6:225:0:0:0,-1.80618,-10 0/0:42.6423:6:6:226:0:0:0,-1.80618,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:99:31:31:1116:0:0:0,-9.33193,-10 0/0:63.7085:21:20:754:1:16:0,-3.39941,-10 0/0:66.7247:14:14:499:0:0:0,-4.21442,-10 0/0:90.8055:22:22:798:0:0:0,-6.62266,-10 0/0:27.5908:1:1:38:0:0:0,-0.30103,-3.8 0/0:66.7247:14:14:528:0:0:0,-4.21442,-10 0/0:47.5644:17:16:601:1:15:0,-2.38706,-10 0/0:39.632:5:5:165:0:0:0,-1.50515,-10 0/0:72.7453:16:16:598:0:0:0,-4.81648,-10 0/0:66.7247:14:14:526:0:0:0,-4.21442,-10 0/0:60.7041:12:12:453:0:0:0,-3.61236,-10 scaffold_102 793631 . C T 628.286 . AB=0.521739;ABP=3.19912;AC=2;AF=0.0108696;AN=184;AO=25;CIGAR=1X;DP=1588;DPB=1588;DPRA=1.47059;EPP=3.79203;EPPR=4.52518;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9936;NS=92;NUMALT=1;ODDS=6.8626;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=917;QR=57150;RO=1561;RPP=57.2971;RPPR=3375.33;RUN=1;SAF=11;SAP=3.79203;SAR=14;SRF=762;SRP=4.91469;SRR=799;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.9307:15:15:560:0:0:0,-4.51545,-10 0/0:44.8689:9:9:334:0:0:0,-2.70927,-10 0/0:65.941:16:16:577:0:0:0,-4.81648,-10 0/0:47.8792:10:10:379:0:0:0,-3.0103,-10 0/0:53.8998:12:12:403:0:0:0,-3.61236,-10 0/0:41.8586:9:8:272:0:0:0,-2.40824,-10 0/0:99:31:31:1111:0:0:0,-9.33193,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/0:59.9204:14:14:521:0:0:0,-4.21442,-10 0/0:35.838:6:6:225:0:0:0,-1.80618,-10 0/0:56.9101:13:13:484:0:0:0,-3.91339,-10 0/0:35.838:6:6:204:0:0:0,-1.80618,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:99:35:35:1259:0:0:0,-10,-10 0/0:80.9925:21:21:757:0:0:0,-6.32163,-10 0/0:56.9101:13:13:448:0:0:0,-3.91339,-10 0/0:74.9719:19:19:677:0:0:0,-5.71957,-10 0/0:56.9101:13:13:468:0:0:0,-3.91339,-10 0/0:71.9616:18:18:661:0:0:0,-5.41854,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:74.9719:19:19:711:0:0:0,-5.71957,-10 0/0:80.9925:21:21:740:0:0:0,-6.32163,-10 0/0:29.8174:4:4:152:0:0:0,-1.20412,-10 0/0:50.8895:11:11:394:0:0:0,-3.31133,-10 0/0:68.9513:17:17:606:0:0:0,-5.11751,-10 0/0:80.9925:21:21:788:0:0:0,-6.32163,-10 0/0:74.9719:19:19:687:0:0:0,-5.71957,-10 0/0:65.941:16:16:597:0:0:0,-4.81648,-10 0/0:65.941:16:16:572:0:0:0,-4.81648,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:41.8586:8:8:298:0:0:0,-2.40824,-10 0/0:47.8792:10:10:359:0:0:0,-3.0103,-10 0/0:41.8586:8:8:288:0:0:0,-2.40824,-10 0/0:59.9204:14:14:521:0:0:0,-4.21442,-10 0/0:56.9101:13:13:494:0:0:0,-3.91339,-10 0/0:41.8586:8:8:280:0:0:0,-2.40824,-10 0/0:59.9204:14:14:506:0:0:0,-4.21442,-10 0/0:80.9925:21:21:765:0:0:0,-6.32163,-10 0/0:68.9513:17:17:621:0:0:0,-5.11751,-10 0/0:65.941:16:16:586:0:0:0,-4.81648,-10 0/0:68.9513:17:17:606:0:0:0,-5.11751,-10 0/0:80.9925:21:21:791:0:0:0,-6.32163,-10 0/0:41.8586:8:8:301:0:0:0,-2.40824,-10 0/0:96.0424:26:26:961:0:0:0,-7.82678,-10 0/0:74.9719:19:19:695:0:0:0,-5.71957,-10 0/0:77.9822:20:20:693:0:0:0,-6.0206,-10 0/0:99:40:40:1445:0:0:0,-10,-10 0/0:77.2042:29:28:1023:1:15:0,-5.76747,-10 0/0:53.8998:12:12:432:0:0:0,-3.61236,-10 0/0:87.0129:23:23:858:0:0:0,-6.92369,-10 0/0:65.941:16:16:577:0:0:0,-4.81648,-10 0/0:99:37:37:1364:0:0:0,-10,-10 0/0:35.838:6:6:222:0:0:0,-1.80618,-10 0/0:44.8689:9:9:337:0:0:0,-2.70927,-10 0/0:99:35:35:1229:0:0:0,-10,-10 0/0:50.8895:11:11:401:0:0:0,-3.31133,-10 0/0:96.0424:26:26:972:0:0:0,-7.82678,-10 0/0:44.8689:9:9:335:0:0:0,-2.70927,-10 0/0:68.9513:17:17:632:0:0:0,-5.11751,-10 0/0:53.8998:12:12:420:0:0:0,-3.61236,-10 0/0:99:38:38:1421:0:0:0,-10,-10 0/0:74.9719:19:19:701:0:0:0,-5.71957,-10 0/0:99:31:31:1163:0:0:0,-9.33193,-10 0/0:62.9307:15:15:569:0:0:0,-4.51545,-10 0/0:53.8998:12:12:439:0:0:0,-3.61236,-10 0/0:99:29:29:1011:0:0:0,-8.72987,-10 0/0:68.9513:17:17:637:0:0:0,-5.11751,-10 0/0:53.8998:12:12:430:0:0:0,-3.61236,-10 0/0:99:30:29:1027:0:0:0,-8.72987,-10 0/0:44.8689:9:9:319:0:0:0,-2.70927,-10 0/0:56.9101:13:13:493:0:0:0,-3.91339,-10 0/1:99:27:13:486:14:524:-10,0,-10 0/0:77.9822:20:20:757:0:0:0,-6.0206,-10 0/0:56.9101:13:13:472:0:0:0,-3.91339,-10 0/1:99:19:9:338:10:378:-10,0,-10 0/0:38.8483:7:7:263:0:0:0,-2.10721,-10 0/0:50.8895:11:11:400:0:0:0,-3.31133,-10 0/0:50.8895:11:11:404:0:0:0,-3.31133,-10 0/0:32.8277:5:5:184:0:0:0,-1.50515,-10 0/0:47.8792:10:10:377:0:0:0,-3.0103,-10 0/0:99:37:37:1363:0:0:0,-10,-10 0/0:77.9822:20:20:749:0:0:0,-6.0206,-10 0/0:59.9204:14:14:506:0:0:0,-4.21442,-10 0/0:56.9101:13:13:464:0:0:0,-3.91339,-10 0/0:74.9719:19:19:704:0:0:0,-5.71957,-10 0/0:50.8895:11:11:418:0:0:0,-3.31133,-10 0/0:53.8998:12:12:451:0:0:0,-3.61236,-10 0/0:59.9204:14:14:532:0:0:0,-4.21442,-10 0/0:47.8792:10:10:380:0:0:0,-3.0103,-10 0/0:59.9204:14:14:529:0:0:0,-4.21442,-10 0/0:59.9204:14:14:517:0:0:0,-4.21442,-10 0/0:44.8689:9:9:342:0:0:0,-2.70927,-10 scaffold_102 852651 . G A 520.433 . AB=0.628571;ABP=8.03571;AC=2;AF=0.0108696;AN=184;AO=25;CIGAR=1X;DP=1846;DPB=1846;DPRA=0.923103;EPP=3.79203;EPPR=10.6462;GTI=1;LEN=1;MEANALT=1;MQM=59.76;MQMR=59.9286;NS=92;NUMALT=1;ODDS=7.71423;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=876;QR=66967;RO=1820;RPP=57.2971;RPPR=3929.08;RUN=1;SAF=11;SAP=3.79203;SAR=14;SRF=947;SRP=9.54381;SRR=873;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:96.7219:23:23:793:0:0:0,-6.92369,-10 0/0:66.6201:13:13:483:0:0:0,-3.91339,-10 0/0:57.033:18:17:633:1:15:0,-2.66327,-10 0/0:81.6715:18:18:683:0:0:0,-5.41854,-10 0/0:72.6406:15:15:540:0:0:0,-4.51545,-10 0/0:60.5995:11:11:418:0:0:0,-3.31133,-10 0/0:99:48:48:1790:0:0:0,-10,-10 0/0:99:27:27:1004:0:0:0,-8.12781,-10 0/0:69.6304:14:14:508:0:0:0,-4.21442,-10 0/0:39.5274:4:4:148:0:0:0,-1.20412,-10 0/0:69.6304:14:14:520:0:0:0,-4.21442,-10 0/0:63.6098:12:12:454:0:0:0,-3.61236,-10 0/0:99:39:39:1406:0:0:0,-10,-10 0/0:99:27:27:1003:0:0:0,-8.12781,-10 0/0:99:24:24:858:0:0:0,-7.22472,-10 0/0:99:29:29:1073:0:0:0,-8.72987,-10 0/0:99:33:33:1249:0:0:0,-9.93399,-10 0/0:45.548:6:6:225:0:0:0,-1.80618,-10 0/0:81.6715:18:18:643:0:0:0,-5.41854,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:78.6612:17:17:610:0:0:0,-5.11751,-10 0/0:99:35:35:1240:0:0:0,-10,-10 0/0:54.5789:9:9:342:0:0:0,-2.70927,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:87.692:20:20:726:0:0:0,-6.0206,-10 0/0:87.692:20:20:755:0:0:0,-6.0206,-10 0/0:90.701:21:21:719:0:0:0,-6.32163,-10 0/0:57.5892:10:10:369:0:0:0,-3.0103,-10 0/0:72.6406:15:15:543:0:0:0,-4.51545,-10 0/0:99:37:37:1363:0:0:0,-10,-10 0/0:54.5789:9:9:342:0:0:0,-2.70927,-10 0/0:60.5995:11:11:417:0:0:0,-3.31133,-10 0/0:66.6201:13:13:481:0:0:0,-3.91339,-10 0/0:60.5995:11:11:370:0:0:0,-3.31133,-10 0/0:75.6509:16:16:586:0:0:0,-4.81648,-10 0/0:45.548:6:6:228:0:0:0,-1.80618,-10 0/0:51.5686:8:8:304:0:0:0,-2.40824,-10 0/0:87.692:20:20:749:0:0:0,-6.0206,-10 0/0:66.6201:13:13:494:0:0:0,-3.91339,-10 0/0:75.6509:16:16:592:0:0:0,-4.81648,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:93.7122:22:22:825:0:0:0,-6.62266,-10 0/0:63.6098:12:12:453:0:0:0,-3.61236,-10 0/0:99:34:34:1227:0:0:0,-10,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:99:28:28:1044:0:0:0,-8.42884,-10 0/0:99:48:48:1768:0:0:0,-10,-10 0/0:93.7122:22:22:810:0:0:0,-6.62266,-10 0/0:75.6509:16:16:585:0:0:0,-4.81648,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/0:66.6201:13:13:485:0:0:0,-3.91339,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:45.548:6:6:228:0:0:0,-1.80618,-10 0/0:48.5583:7:7:244:0:0:0,-2.10721,-10 0/0:99:38:38:1393:0:0:0,-10,-10 0/0:81.6715:18:18:673:0:0:0,-5.41854,-10 0/0:90.701:21:21:772:0:0:0,-6.32163,-10 0/0:57.5892:10:10:332:0:0:0,-3.0103,-10 0/0:96.7219:23:23:828:0:0:0,-6.92369,-10 0/0:57.5892:10:10:353:0:0:0,-3.0103,-10 0/0:99:26:26:982:0:0:0,-7.82678,-10 0/0:84.6818:19:19:712:0:0:0,-5.71957,-10 0/0:99:34:34:1279:0:0:0,-10,-10 0/0:99:24:24:901:0:0:0,-7.22472,-10 0/0:72.6406:15:15:559:0:0:0,-4.51545,-10 0/0:49.3944:24:23:801:1:38:0,-2.04451,-10 0/0:75.6509:16:16:605:0:0:0,-4.81648,-10 0/0:60.5995:11:11:395:0:0:0,-3.31133,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:57.5892:10:10:364:0:0:0,-3.0103,-10 0/0:84.6818:19:19:652:0:0:0,-5.71957,-10 0/0:99:37:37:1380:0:0:0,-10,-10 0/0:99:24:24:860:0:0:0,-7.22472,-10 0/1:0.00115623:14:0:0:14:511:-10,-4.21442,0 0/1:99:21:13:478:8:297:-10,0,-10 0/0:48.5583:7:7:263:0:0:0,-2.10721,-10 0/0:78.6612:17:17:636:0:0:0,-5.11751,-10 0/0:51.524:16:15:561:1:15:0,-2.11236,-10 0/0:33.5068:2:2:54:0:0:0,-0.60206,-5.13 0/0:90.701:21:21:757:0:0:0,-6.32163,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:93.7122:22:22:814:0:0:0,-6.62266,-10 0/0:96.7219:23:23:836:0:0:0,-6.92369,-10 0/0:81.6715:19:18:677:0:0:0,-5.41854,-10 0/0:75.6509:16:16:594:0:0:0,-4.81648,-10 0/0:81.6715:18:18:679:0:0:0,-5.41854,-10 0/0:87.692:20:20:760:0:0:0,-6.0206,-10 0/0:60.5995:11:11:410:0:0:0,-3.31133,-10 0/0:57.5892:10:10:366:0:0:0,-3.0103,-10 0/0:99:27:27:1007:0:0:0,-8.12781,-10 0/0:90.701:21:21:789:0:0:0,-6.32163,-10 0/0:78.6612:17:17:623:0:0:0,-5.11751,-10 scaffold_102 853615 . C T 81.2264 . AB=0.3125;ABP=7.89611;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1826;DPB=1826;DPRA=0.890028;EPP=3.0103;EPPR=3.06886;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9642;NS=92;NUMALT=1;ODDS=12.9031;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=259;QR=65859;RO=1817;RPP=20.3821;RPPR=3948.58;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=905;SRP=3.06886;SRR=912;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:17:17:605:0:0:0,-5.11751,-10 0/0:62.8772:3:3:110:0:0:0,-0.90309,-10 0/0:99:26:26:952:0:0:0,-7.82678,-10 0/0:89.9699:12:12:436:0:0:0,-3.61236,-10 0/0:68.8978:5:5:189:0:0:0,-1.50515,-10 0/0:92.9783:13:13:484:0:0:0,-3.91339,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:99:19:19:680:0:0:0,-5.71957,-10 0/0:99:18:18:648:0:0:0,-5.41854,-10 0/0:65.8875:4:4:152:0:0:0,-1.20412,-10 0/0:71.9081:6:6:225:0:0:0,-1.80618,-10 0/0:68.8978:5:5:186:0:0:0,-1.50515,-10 0/0:99:43:43:1513:0:0:0,-10,-10 0/0:99:25:25:883:0:0:0,-7.52575,-10 0/0:99:24:24:869:0:0:0,-7.22472,-10 0/0:99:35:35:1253:0:0:0,-10,-10 0/0:99:23:23:867:0:0:0,-6.92369,-10 0/0:83.9491:10:10:373:0:0:0,-3.0103,-10 0/0:99:24:24:871:0:0:0,-7.22472,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:99:22:22:830:0:0:0,-6.62266,-10 0/0:99:23:23:871:0:0:0,-6.92369,-10 0/0:95.9867:14:14:499:0:0:0,-4.21442,-10 0/0:95.9867:14:14:508:0:0:0,-4.21442,-10 0/0:99:15:15:568:0:0:0,-4.51545,-10 0/0:99:26:25:907:1:16:0,-4.81181,-10 0/0:89.9699:12:12:420:0:0:0,-3.61236,-10 0/0:89.9699:12:12:425:0:0:0,-3.61236,-10 0/0:99:30:30:1085:0:0:0,-9.0309,-10 0/0:99:33:33:1165:0:0:0,-9.93399,-10 0/0:65.8875:4:4:129:0:0:0,-1.20412,-10 0/0:74.9184:7:7:265:0:0:0,-2.10721,-10 0/0:99:17:17:638:0:0:0,-5.11751,-10 0/0:99:16:16:558:0:0:0,-4.81648,-10 0/0:99:17:17:614:0:0:0,-5.11751,-10 0/0:71.9081:6:6:202:0:0:0,-1.80618,-10 0/0:80.939:9:9:327:0:0:0,-2.70927,-10 0/0:99:36:36:1274:0:0:0,-10,-10 0/0:86.9591:11:11:409:0:0:0,-3.31133,-10 0/0:99:16:16:580:0:0:0,-4.81648,-10 0/0:99:22:22:806:0:0:0,-6.62266,-10 0/0:99:22:22:798:0:0:0,-6.62266,-10 0/0:99:18:18:650:0:0:0,-5.41854,-10 0/0:99:35:35:1231:0:0:0,-10,-10 0/0:99:29:29:1067:0:0:0,-8.72987,-10 0/0:86.9591:11:11:408:0:0:0,-3.31133,-10 0/0:99:48:48:1763:0:0:0,-10,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:89.9699:12:12:449:0:0:0,-3.61236,-10 0/0:99:36:36:1288:0:0:0,-10,-10 0/0:56.0375:17:16:580:1:37:0,-0.187061,-10 0/0:99:35:35:1309:0:0:0,-10,-10 0/0:99:17:17:623:0:0:0,-5.11751,-10 0/0:80.939:9:9:338:0:0:0,-2.70927,-10 0/0:99:35:35:1222:0:0:0,-10,-10 0/0:99:15:15:534:0:0:0,-4.51545,-10 0/0:89.9699:12:12:446:0:0:0,-3.61236,-10 0/0:89.9699:12:12:440:0:0:0,-3.61236,-10 0/0:99:17:17:616:0:0:0,-5.11751,-10 0/0:99:16:16:583:0:0:0,-4.81648,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:95.9867:14:14:503:0:0:0,-4.21442,-10 0/0:99:24:24:903:0:0:0,-7.22472,-10 0/0:99:25:25:861:0:0:0,-7.52575,-10 0/0:99:18:18:613:0:0:0,-5.41854,-10 0/0:99:38:38:1411:0:0:0,-10,-10 0/0:89.9699:12:12:454:0:0:0,-3.61236,-10 0/0:99:21:21:760:0:0:0,-6.32163,-10 0/0:99:44:44:1568:0:0:0,-10,-10 0/0:99:16:16:501:0:0:0,-4.81648,-10 0/0:99:25:25:915:0:0:0,-7.52575,-10 0/0:99:35:35:1253:0:0:0,-10,-10 0/1:81.2264:16:11:417:5:190:-10,0,-10 0/0:99:18:18:663:0:0:0,-5.41854,-10 0/0:99:37:37:1366:0:0:0,-10,-10 0/0:60.9999:12:11:402:1:16:0,-0.933179,-10 0/0:92.9783:13:13:470:0:0:0,-3.91339,-10 0/0:95.9867:14:14:510:0:0:0,-4.21442,-10 0/0:68.8978:5:5:182:0:0:0,-1.50515,-10 0/0:83.9491:10:10:335:0:0:0,-3.0103,-10 0/0:99:49:49:1812:0:0:0,-10,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:99:23:23:854:0:0:0,-6.92369,-10 0/0:99:28:28:1001:0:0:0,-8.42884,-10 0/0:99:21:20:700:0:0:0,-6.0206,-10 0/0:74.9184:7:7:259:0:0:0,-2.10721,-10 0/0:92.9783:13:13:480:0:0:0,-3.91339,-10 0/0:74.9184:7:7:220:0:0:0,-2.10721,-10 0/0:83.9491:10:10:357:0:0:0,-3.0103,-10 0/0:99:18:18:659:0:0:0,-5.41854,-10 0/0:95.9867:14:14:529:0:0:0,-4.21442,-10 0/0:99:19:19:713:0:0:0,-5.71957,-10 scaffold_102 882620 . G A 676.211 . AB=0.608696;ABP=7.73089;AC=4;AF=0.0217391;AN=184;AO=31;CIGAR=1X;DP=1437;DPB=1437;DPRA=0.937567;EPP=3.64073;EPPR=4.22114;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9815;NS=92;NUMALT=1;ODDS=7.51035;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1105;QR=51387;RO=1406;RPP=70.3259;RPPR=2901.76;RUN=1;SAF=17;SAP=3.64073;SAR=14;SRF=707;SRP=3.10914;SRR=699;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:86.808:20:20:699:0:0:0,-6.0206,-10 0/1:1.31807e-05:4:0:0:4:152:-10,-1.20412,0 0/0:83.7977:19:19:682:0:0:0,-5.71957,-10 0/0:62.7256:12:12:420:0:0:0,-3.61236,-10 0/0:68.7462:14:14:519:0:0:0,-4.21442,-10 0/0:50.6844:8:8:297:0:0:0,-2.40824,-10 0/0:99:40:40:1463:0:0:0,-10,-10 0/0:53.3152:18:17:618:1:15:0,-2.66327,-10 0/0:59.7153:11:11:418:0:0:0,-3.31133,-10 0/0:38.6432:4:4:149:0:0:0,-1.20412,-10 0/0:47.6741:7:7:229:0:0:0,-2.10721,-10 0/0:41.6535:5:5:189:0:0:0,-1.50515,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:77.7771:17:17:617:0:0:0,-5.11751,-10 0/0:92.8285:22:22:809:0:0:0,-6.62266,-10 0/0:89.8183:21:21:751:0:0:0,-6.32163,-10 0/1:99:11:6:219:5:189:-10,0,-10 0/0:53.6947:9:9:337:0:0:0,-2.70927,-10 0/0:89.8183:21:21:773:0:0:0,-6.32163,-10 0/0:99:33:33:1192:0:0:0,-9.93399,-10 0/0:65.7359:13:13:469:0:0:0,-3.91339,-10 0/0:99:26:26:984:0:0:0,-7.82678,-10 0/0:44.6638:6:6:224:0:0:0,-1.80618,-10 0/0:71.7565:15:15:529:0:0:0,-4.51545,-10 0/0:68.7462:14:14:508:0:0:0,-4.21442,-10 0/0:74.7668:16:16:583:0:0:0,-4.81648,-10 0/0:74.7668:16:16:575:0:0:0,-4.81648,-10 0/0:56.705:10:10:370:0:0:0,-3.0103,-10 0/0:65.7359:13:13:485:0:0:0,-3.91339,-10 0/0:99:26:26:981:0:0:0,-7.82678,-10 0/0:47.6741:7:7:240:0:0:0,-2.10721,-10 0/0:42.3654:14:13:491:1:15:0,-1.56829,-10 0/0:62.7256:12:12:432:0:0:0,-3.61236,-10 0/0:53.6947:9:9:338:0:0:0,-2.70927,-10 0/0:80.7874:18:18:655:0:0:0,-5.41854,-10 0/0:32.6226:2:2:75:0:0:0,-0.60206,-7.125 0/0:50.6844:8:8:281:0:0:0,-2.40824,-10 0/0:49.9606:25:24:898:1:38:0,-2.32781,-10 0/0:62.7256:12:12:456:0:0:0,-3.61236,-10 0/0:68.7462:14:14:501:0:0:0,-4.21442,-10 0/0:83.7977:19:19:701:0:0:0,-5.71957,-10 0/0:71.7565:15:15:543:0:0:0,-4.51545,-10 0/0:56.705:10:10:370:0:0:0,-3.0103,-10 0/0:77.7771:17:17:640:0:0:0,-5.11751,-10 0/0:80.7874:18:18:681:0:0:0,-5.41854,-10 0/0:92.8285:22:22:806:0:0:0,-6.62266,-10 0/0:99:31:31:1105:0:0:0,-9.33193,-10 0/0:99:25:25:906:0:0:0,-7.52575,-10 0/0:68.7462:14:14:529:0:0:0,-4.21442,-10 0/0:99:36:36:1272:0:0:0,-10,-10 0/0:53.6947:9:9:315:0:0:0,-2.70927,-10 0/0:99:33:33:1251:0:0:0,-9.93399,-10 0/0:80.7874:18:18:654:0:0:0,-5.41854,-10 0/0:44.6638:6:6:221:0:0:0,-1.80618,-10 0/0:99:39:39:1427:0:0:0,-10,-10 0/0:56.705:10:10:380:0:0:0,-3.0103,-10 0/0:59.7153:11:11:371:0:0:0,-3.31133,-10 0/0:59.7153:11:11:416:0:0:0,-3.31133,-10 0/0:65.7359:13:13:483:0:0:0,-3.91339,-10 0/0:62.7256:12:12:420:0:0:0,-3.61236,-10 0/1:99:26:12:446:14:510:-10,0,-10 0/0:65.7359:13:13:466:0:0:0,-3.91339,-10 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:59.7153:11:11:414:0:0:0,-3.31133,-10 0/0:65.7359:13:13:466:0:0:0,-3.91339,-10 0/0:92.8285:22:22:769:0:0:0,-6.62266,-10 0/0:80.7874:18:18:639:0:0:0,-5.41854,-10 0/1:2.63614e-05:5:0:0:5:186:-10,-1.50515,0 0/0:99:28:28:1046:0:0:0,-8.42884,-10 0/0:50.6844:8:8:235:0:0:0,-2.40824,-10 0/0:56.705:10:10:371:0:0:0,-3.0103,-10 0/0:95.8387:23:23:831:0:0:0,-6.92369,-10 0/0:80.7874:18:18:639:0:0:0,-5.41854,-10 0/0:77.7771:17:17:634:0:0:0,-5.11751,-10 0/0:92.8285:22:22:803:0:0:0,-6.62266,-10 0/0:41.6535:5:5:190:0:0:0,-1.50515,-10 0/0:56.705:10:10:355:0:0:0,-3.0103,-10 0/0:50.6844:8:8:281:0:0:0,-2.40824,-10 0/0:41.6535:5:5:180:0:0:0,-1.50515,-10 0/0:53.6947:9:9:319:0:0:0,-2.70927,-10 0/0:99:25:25:931:0:0:0,-7.52575,-10 0/0:80.7874:18:18:666:0:0:0,-5.41854,-10 0/0:74.7668:16:16:607:0:0:0,-4.81648,-10 0/0:53.6947:9:9:315:0:0:0,-2.70927,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:41.6535:5:5:190:0:0:0,-1.50515,-10 0/0:56.705:10:10:371:0:0:0,-3.0103,-10 0/0:47.6741:7:7:240:0:0:0,-2.10721,-10 0/0:44.6638:6:6:223:0:0:0,-1.80618,-10 0/0:98.8487:24:24:900:0:0:0,-7.22472,-10 0/0:47.6741:7:7:266:0:0:0,-2.10721,-10 0/0:71.7565:15:15:563:0:0:0,-4.51545,-10 scaffold_102 887080 . C T 318.945 . AB=0.466667;ABP=3.29983;AC=1;AF=0.00543478;AN=184;AO=17;CIGAR=1X;DP=1734;DPB=1734;DPRA=1.57726;EPP=3.13803;EPPR=15.1635;GTI=0;LEN=1;MEANALT=1;MQM=54.8824;MQMR=59.7308;NS=92;NUMALT=1;ODDS=8.3794;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=555;QR=62434;RO=1716;RPP=39.9253;RPPR=3283.12;RUN=1;SAF=9;SAP=3.13803;SAR=8;SRF=858;SRP=3.0103;SRR=858;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:66.4986:14:14:530:0:0:0,-4.21442,-10 0/0:51.4471:9:9:312:0:0:0,-2.70927,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:63.4883:13:13:443:0:0:0,-3.91339,-10 0/0:54.4574:10:10:369:0:0:0,-3.0103,-10 0/0:57.4677:11:11:417:0:0:0,-3.31133,-10 0/0:99:37:36:1299:1:16:0,-7.96991,-10 0/0:87.5705:21:21:760:0:0:0,-6.32163,-10 0/0:48.4368:8:8:288:0:0:0,-2.40824,-10 0/0:42.4162:6:6:208:0:0:0,-1.80618,-10 0/0:45.4265:7:7:251:0:0:0,-2.10721,-10 0/0:39.4059:5:5:182:0:0:0,-1.50515,-10 0/0:84.5604:20:20:739:0:0:0,-6.0206,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:87.5705:21:21:785:0:0:0,-6.32163,-10 0/0:93.5906:23:23:874:0:0:0,-6.92369,-10 0/0:99:27:27:979:0:0:0,-8.12781,-10 0/0:45.4265:7:7:241:0:0:0,-2.10721,-10 0/0:90.5806:22:22:819:0:0:0,-6.62266,-10 0/0:99:37:37:1358:0:0:0,-10,-10 0/0:99:28:28:1033:0:0:0,-8.42884,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:57.4677:11:11:417:0:0:0,-3.31133,-10 0/0:99:34:34:1212:0:0:0,-10,-10 0/0:72.5191:16:16:604:0:0:0,-4.81648,-10 0/0:72.5191:16:16:597:0:0:0,-4.81648,-10 0/0:63.4883:13:13:461:0:0:0,-3.91339,-10 0/0:63.4883:13:13:445:0:0:0,-3.91339,-10 0/0:78.5398:18:18:662:0:0:0,-5.41854,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:60.478:12:12:426:0:0:0,-3.61236,-10 0/0:48.4368:8:8:289:0:0:0,-2.40824,-10 0/0:99:29:29:1033:0:0:0,-8.72987,-10 0/0:51.4471:9:9:337:0:0:0,-2.70927,-10 0/0:84.5604:20:20:705:0:0:0,-6.0206,-10 0/0:36.3956:4:4:152:0:0:0,-1.20412,-10 0/0:72.5191:16:16:602:0:0:0,-4.81648,-10 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:63.4883:13:13:464:0:0:0,-3.91339,-10 0/0:63.4883:13:13:481:0:0:0,-3.91339,-10 0/0:90.5806:22:22:797:0:0:0,-6.62266,-10 0/0:81.5501:19:19:696:0:0:0,-5.71957,-10 0/0:57.4677:11:11:409:0:0:0,-3.31133,-10 0/0:87.5705:21:21:793:0:0:0,-6.32163,-10 0/0:84.5604:20:20:659:0:0:0,-6.0206,-10 0/0:99:28:28:990:0:0:0,-8.42884,-10 0/0:99:44:44:1597:0:0:0,-10,-10 0/0:84.5604:20:20:741:0:0:0,-6.0206,-10 0/0:72.5191:16:16:607:0:0:0,-4.81648,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:66.4986:14:14:486:0:0:0,-4.21442,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:48.4368:8:8:303:0:0:0,-2.40824,-10 0/0:42.4162:6:6:203:0:0:0,-1.80618,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:63.4883:13:13:486:0:0:0,-3.91339,-10 0/0:93.5906:23:23:832:0:0:0,-6.92369,-10 0/0:69.5089:15:15:541:0:0:0,-4.51545,-10 0/0:60.478:12:12:431:0:0:0,-3.61236,-10 0/0:84.5604:20:20:732:0:0:0,-6.0206,-10 0/0:99:26:26:975:0:0:0,-7.82678,-10 0/0:63.4883:13:13:452:0:0:0,-3.91339,-10 0/0:99:45:44:1576:0:0:0,-10,-10 0/0:47.3861:24:23:815:1:38:0,-2.04451,-10 0/0:60.478:12:12:448:0:0:0,-3.61236,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:66.4986:14:14:479:0:0:0,-4.21442,-10 0/0:54.4574:10:10:357:0:0:0,-3.0103,-10 0/0:99:37:37:1356:0:0:0,-10,-10 0/0:78.5398:18:18:664:0:0:0,-5.41854,-10 0/0:72.5191:16:16:568:0:0:0,-4.81648,-10 0/1:99:30:16:606:14:485:-10,0,-10 0/0:99:27:27:894:0:0:0,-8.12781,-10 0/0:60.478:12:12:455:0:0:0,-3.61236,-10 0/0:99:30:30:1101:0:0:0,-9.0309,-10 0/0:57.4677:11:11:414:0:0:0,-3.31133,-10 0/0:57.4677:11:11:415:0:0:0,-3.31133,-10 0/0:66.4986:14:14:528:0:0:0,-4.21442,-10 0/0:48.4368:8:8:295:0:0:0,-2.40824,-10 0/0:54.4574:10:10:341:0:0:0,-3.0103,-10 0/0:99:30:30:1101:0:0:0,-9.0309,-10 0/0:90.5806:22:22:796:0:0:0,-6.62266,-10 0/0:99:25:25:883:0:0:0,-7.52575,-10 0/0:69.5089:15:15:568:0:0:0,-4.51545,-10 0/0:72.5191:16:16:578:0:0:0,-4.81648,-10 0/0:39.4059:5:5:189:0:0:0,-1.50515,-10 0/0:72.2191:25:24:887:1:16:0,-4.52781,-10 0/0:36.3956:4:4:139:0:0:0,-1.20412,-10 0/0:57.4677:11:11:392:0:0:0,-3.31133,-10 0/0:99:25:25:935:0:0:0,-7.52575,-10 0/0:57.4677:11:11:414:0:0:0,-3.31133,-10 0/0:78.5398:18:18:628:0:0:0,-5.41854,-10 scaffold_102 893143 . A G 216.408 . AB=0.529412;ABP=3.13803;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=1429;DPB=1429;DPRA=1.22933;EPP=3.87889;EPPR=3.26928;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9824;NS=92;NUMALT=1;ODDS=8.82049;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=375;QR=52713;RO=1417;RPP=16.9077;RPPR=2951.08;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=717;SRP=3.45318;SRR=700;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:68.4114:12:12:455:0:0:0,-3.61236,-10 0/0:62.3908:10:10:380:0:0:0,-3.0103,-10 0/0:71.4217:13:13:471:0:0:0,-3.91339,-10 0/0:62.3908:10:10:367:0:0:0,-3.0103,-10 0/0:83.4629:17:17:633:0:0:0,-5.11751,-10 0/0:65.4011:11:11:393:0:0:0,-3.31133,-10 0/0:99:27:27:1002:0:0:0,-8.12781,-10 0/0:77.4423:15:15:549:0:0:0,-4.51545,-10 0/0:83.4629:17:17:641:0:0:0,-5.11751,-10 0/0:38.3084:2:2:76:0:0:0,-0.60206,-7.22 0/0:59.3805:9:9:331:0:0:0,-2.70927,-10 0/0:50.3496:6:6:228:0:0:0,-1.80618,-10 0/0:99:34:34:1280:0:0:0,-10,-10 0/0:99:25:25:904:0:0:0,-7.52575,-10 0/0:89.4837:19:19:717:0:0:0,-5.71957,-10 0/0:99:23:23:858:0:0:0,-6.92369,-10 0/0:68.4114:12:12:435:0:0:0,-3.61236,-10 0/0:53.3599:7:7:266:0:0:0,-2.10721,-10 0/0:62.3908:10:10:376:0:0:0,-3.0103,-10 0/0:99:23:23:829:0:0:0,-6.92369,-10 0/0:89.4837:19:19:719:0:0:0,-5.71957,-10 0/0:86.4733:18:18:677:0:0:0,-5.41854,-10 0/0:56.3702:8:8:304:0:0:0,-2.40824,-10 0/0:99:23:23:855:0:0:0,-6.92369,-10 0/0:56.3702:8:8:303:0:0:0,-2.40824,-10 0/0:99:27:27:1024:0:0:0,-8.12781,-10 0/0:92.4932:20:20:749:0:0:0,-6.0206,-10 0/0:83.4629:17:17:641:0:0:0,-5.11751,-10 0/0:83.4629:17:17:641:0:0:0,-5.11751,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:74.432:14:14:519:0:0:0,-4.21442,-10 0/0:53.3599:7:7:266:0:0:0,-2.10721,-10 0/0:77.4423:15:15:555:0:0:0,-4.51545,-10 0/0:56.3702:8:8:303:0:0:0,-2.40824,-10 0/0:80.4526:16:16:606:0:0:0,-4.81648,-10 0/0:50.3496:6:6:218:0:0:0,-1.80618,-10 0/0:59.3805:9:9:338:0:0:0,-2.70927,-10 0/0:99:24:24:901:0:0:0,-7.22472,-10 0/0:80.4526:16:16:605:0:0:0,-4.81648,-10 0/0:71.4217:13:13:481:0:0:0,-3.91339,-10 0/0:99:26:26:963:0:0:0,-7.82678,-10 0/0:89.4837:19:19:722:0:0:0,-5.71957,-10 0/0:74.432:14:14:527:0:0:0,-4.21442,-10 0/0:99:29:29:1068:0:0:0,-8.72987,-10 0/0:83.4629:17:17:611:0:0:0,-5.11751,-10 0/0:83.4629:17:17:642:0:0:0,-5.11751,-10 0/0:99:37:37:1341:0:0:0,-10,-10 0/0:92.4932:20:20:758:0:0:0,-6.0206,-10 0/0:68.4114:12:12:446:0:0:0,-3.61236,-10 0/0:43.9592:21:20:733:1:38:0,-1.19941,-10 0/0:65.4011:11:11:418:0:0:0,-3.31133,-10 0/0:99:31:31:1162:0:0:0,-9.33193,-10 0/0:62.3908:10:10:380:0:0:0,-3.0103,-10 0/0:53.3599:7:7:266:0:0:0,-2.10721,-10 0/0:99:25:25:935:0:0:0,-7.52575,-10 0/0:83.4629:17:17:638:0:0:0,-5.11751,-10 0/0:99:23:23:861:0:0:0,-6.92369,-10 0/0:53.3599:7:7:261:0:0:0,-2.10721,-10 0/0:71.4217:13:13:494:0:0:0,-3.91339,-10 0/0:56.3702:8:8:304:0:0:0,-2.40824,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:56.3702:8:8:303:0:0:0,-2.40824,-10 0/0:99:24:23:867:0:0:0,-6.92369,-10 0/0:83.4629:17:17:643:0:0:0,-5.11751,-10 0/0:50.3496:6:6:227:0:0:0,-1.80618,-10 0/0:99:26:26:937:0:0:0,-7.82678,-10 0/0:92.4932:21:20:722:0:0:0,-6.0206,-10 0/0:53.3599:7:7:266:0:0:0,-2.10721,-10 0/0:99:26:26:986:0:0:0,-7.82678,-10 0/0:47.3393:5:5:187:0:0:0,-1.50515,-10 0/0:77.4423:15:15:570:0:0:0,-4.51545,-10 0/1:99:17:8:294:9:337:-10,0,-10 0/0:74.432:14:14:502:0:0:0,-4.21442,-10 0/0:77.4423:15:15:569:0:0:0,-4.51545,-10 0/0:80.4526:16:16:564:0:0:0,-4.81648,-10 0/0:44.329:4:4:149:0:0:0,-1.20412,-10 0/0:53.3599:7:7:255:0:0:0,-2.10721,-10 0/0:62.3908:10:10:378:0:0:0,-3.0103,-10 0/0:50.3496:6:6:223:0:0:0,-1.80618,-10 0/0:74.432:14:14:523:0:0:0,-4.21442,-10 0/0:89.4837:19:19:720:0:0:0,-5.71957,-10 0/0:86.4733:18:18:664:0:0:0,-5.41854,-10 0/0:77.4423:15:15:563:0:0:0,-4.51545,-10 0/0:50.3496:6:6:205:0:0:0,-1.80618,-10 0/0:59.3805:9:9:342:0:0:0,-2.70927,-10 0/0:53.3599:7:7:265:0:0:0,-2.10721,-10 0/0:53.3599:7:7:266:0:0:0,-2.10721,-10 0/0:77.4423:15:15:545:0:0:0,-4.51545,-10 0/0:68.4114:12:12:445:0:0:0,-3.61236,-10 0/0:65.4011:11:11:414:0:0:0,-3.31133,-10 0/0:92.4932:20:20:738:0:0:0,-6.0206,-10 0/0:80.4526:16:16:579:0:0:0,-4.81648,-10 scaffold_102 909422 . G C 2134.28 . AB=0.620155;ABP=19.1869;AC=10;AF=0.0543478;AN=184;AO=82;CIGAR=1X;DP=1324;DPB=1324;DPRA=0.955671;EPP=6.82362;EPPR=3.51762;GTI=6;LEN=1;MEANALT=1;MQM=59.8415;MQMR=59.9386;NS=92;NUMALT=1;ODDS=3.64105;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3025;QR=44175;RO=1237;RPP=164.123;RPPR=2620.08;RUN=1;SAF=45;SAP=4.70511;SAR=37;SRF=602;SRP=4.92197;SRR=635;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.132:11:10:374:0:0:0,-3.0103,-10 0/0:41.1217:9:9:316:0:0:0,-2.70927,-10 0/0:65.2041:17:17:619:0:0:0,-5.11751,-10 0/0:38.1114:8:8:302:0:0:0,-2.40824,-10 0/1:99:9:4:138:5:190:-10,0,-10 0/0:32.0908:6:6:195:0:0:0,-1.80618,-10 0/0:99:32:32:1108:0:0:0,-9.63296,-10 0/0:77.2453:21:21:710:0:0:0,-6.32163,-10 0/0:47.1423:11:11:413:0:0:0,-3.31133,-10 0/1:7.37064e-05:1:0:0:1:38:-3.8,-0.30103,0 0/1:0.00471974:7:0:0:7:265:-10,-2.10721,0 0/0:32.0908:6:6:223:0:0:0,-1.80618,-10 0/0:86.2761:24:24:834:0:0:0,-7.22472,-10 0/1:99:32:15:522:17:646:-10,0,-10 0/0:71.2247:19:19:718:0:0:0,-5.71957,-10 0/0:71.2247:19:19:670:0:0:0,-5.71957,-10 0/0:59.1835:15:15:562:0:0:0,-4.51545,-10 0/0:50.1526:12:12:444:0:0:0,-3.61236,-10 0/0:68.2144:18:18:606:0:0:0,-5.41854,-10 0/0:99:35:35:1235:0:0:0,-10,-10 0/0:47.1423:11:11:376:0:0:0,-3.31133,-10 0/0:80.2556:22:22:777:0:0:0,-6.62266,-10 0/0:29.0805:5:5:184:0:0:0,-1.50515,-10 0/0:44.132:10:10:360:0:0:0,-3.0103,-10 0/0:41.1217:9:9:310:0:0:0,-2.70927,-10 0/0:53.1629:13:13:439:0:0:0,-3.91339,-10 0/0:86.2761:24:24:834:0:0:0,-7.22472,-10 0/0:23.0599:3:3:97:0:0:0,-0.90309,-9.05333 0/0:41.1217:9:9:318:0:0:0,-2.70927,-10 0/0:92.2963:26:26:912:0:0:0,-7.82678,-10 0/0:38.1114:8:8:304:0:0:0,-2.40824,-10 0/0:29.0805:5:5:190:0:0:0,-1.50515,-10 0/0:62.1938:16:16:530:0:0:0,-4.81648,-10 0/0:41.1217:9:9:320:0:0:0,-2.70927,-10 0/0:0.108257:16:15:556:1:38:-0.18764,0,-10 0/0:29.0805:5:5:181:0:0:0,-1.50515,-10 0/0:35.1011:7:7:261:0:0:0,-2.10721,-10 0/0:83.2659:23:23:794:0:0:0,-6.92369,-10 0/0:62.1938:16:16:578:0:0:0,-4.81648,-10 0/0:44.132:10:10:363:0:0:0,-3.0103,-10 0/0:71.2247:19:19:710:0:0:0,-5.71957,-10 0/0:56.1732:15:14:489:0:0:0,-4.21442,-10 0/0:53.1629:13:13:472:0:0:0,-3.91339,-10 0/0:52.9578:21:20:691:1:15:0,-3.49941,-10 0/0:71.2247:19:19:701:0:0:0,-5.71957,-10 0/0:38.1114:8:8:295:0:0:0,-2.40824,-10 0/0:89.2863:25:25:919:0:0:0,-7.52575,-10 0/0:80.2556:22:22:786:0:0:0,-6.62266,-10 0/0:44.132:10:10:362:0:0:0,-3.0103,-10 0/0:86.2761:24:24:870:0:0:0,-7.22472,-10 0/0:35.1011:7:7:240:0:0:0,-2.10721,-10 0/0:98.3154:28:28:971:0:0:0,-8.42884,-10 0/0:44.132:10:10:374:0:0:0,-3.0103,-10 0/0:38.1114:9:8:293:0:0:0,-2.40824,-10 0/0:99:33:32:1182:0:0:0,-9.63296,-10 0/0:38.1114:8:8:291:0:0:0,-2.40824,-10 0/0:65.2041:17:17:624:0:0:0,-5.11751,-10 0/0:35.1011:7:7:255:0:0:0,-2.10721,-10 0/0:44.132:10:10:372:0:0:0,-3.0103,-10 0/0:47.1423:11:11:411:0:0:0,-3.31133,-10 0/0:77.2453:21:21:770:0:0:0,-6.32163,-10 0/0:59.1835:15:15:491:0:0:0,-4.51545,-10 0/0:89.2863:25:25:905:0:0:0,-7.52575,-10 0/1:99:13:5:172:8:303:-10,0,-10 0/0:38.1114:8:8:302:0:0:0,-2.40824,-10 0/0:86.2761:24:24:898:0:0:0,-7.22472,-10 0/0:77.2453:21:21:753:0:0:0,-6.32163,-10 0/0:41.1217:9:9:314:0:0:0,-2.70927,-10 0/1:99:30:16:580:14:491:-10,0,-10 0/1:0.00235923:6:0:0:6:227:-10,-1.80618,0 0/0:65.2041:17:17:636:0:0:0,-5.11751,-10 0/0:80.2556:22:22:796:0:0:0,-6.62266,-10 0/0:65.2041:17:17:524:0:0:0,-5.11751,-10 0/0:47.1423:11:11:407:0:0:0,-3.31133,-10 0/0:83.2659:23:23:785:0:0:0,-6.92369,-10 0/1:0.00471974:7:0:0:7:243:-10,-2.10721,0 0/0:47.1423:11:11:382:0:0:0,-3.31133,-10 0/0:29.0805:5:5:174:0:0:0,-1.50515,-10 0/0:26.0702:4:4:143:0:0:0,-1.20412,-10 0/0:26.0702:4:4:128:0:0:0,-1.20412,-10 0/0:65.2041:18:17:587:0:0:0,-5.11751,-10 0/0:74.235:20:20:739:0:0:0,-6.0206,-10 0/0:56.1732:14:14:502:0:0:0,-4.21442,-10 0/0:68.2144:18:18:616:0:0:0,-5.41854,-10 0/1:99:19:9:319:10:379:-10,0,-10 0/1:0.00117945:5:0:0:5:190:-10,-1.50515,0 0/0:47.1423:11:11:385:0:0:0,-3.31133,-10 0/0:50.1526:12:12:438:0:0:0,-3.61236,-10 0/0:23.0599:3:3:108:0:0:0,-0.90309,-10 0/0:53.1629:13:13:489:0:0:0,-3.91339,-10 0/0:59.1835:15:15:549:0:0:0,-4.51545,-10 0/0:38.1114:8:8:302:0:0:0,-2.40824,-10 scaffold_102 975741 . G C 379.368 . AB=0.484848;ABP=3.0761;AC=1;AF=0.00543478;AN=184;AO=16;CIGAR=1X;DP=2020;DPB=2020;DPRA=1.51132;EPP=3.55317;EPPR=22.7682;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9656;NS=92;NUMALT=1;ODDS=8.56572;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=561;QR=73727;RO=2003;RPP=37.7539;RPPR=4283.26;RUN=1;SAF=7;SAP=3.55317;SAR=9;SRF=942;SRP=18.3624;SRR=1061;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.3261:16:16:603:0:0:0,-4.81648,-10 0/0:55.2643:10:10:370:0:0:0,-3.0103,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:52.254:9:9:339:0:0:0,-2.70927,-10 0/0:76.3363:17:17:612:0:0:0,-5.11751,-10 0/0:70.3158:15:15:542:0:0:0,-4.51545,-10 0/0:99:41:41:1522:0:0:0,-10,-10 0/0:99:40:40:1436:0:0:0,-10,-10 0/0:67.3055:14:14:494:0:0:0,-4.21442,-10 0/0:49.2437:8:8:304:0:0:0,-2.40824,-10 0/0:40.2128:5:5:190:0:0:0,-1.50515,-10 0/0:55.2643:10:10:378:0:0:0,-3.0103,-10 0/0:99:29:29:1035:0:0:0,-8.72987,-10 0/0:99:38:38:1416:0:0:0,-10,-10 0/0:99:28:28:983:0:0:0,-8.42884,-10 0/0:99:26:26:939:0:0:0,-7.82678,-10 0/0:91.3871:22:22:812:0:0:0,-6.62266,-10 0/0:67.3055:14:14:510:0:0:0,-4.21442,-10 0/0:88.3772:21:21:795:0:0:0,-6.32163,-10 0/0:99:39:39:1446:0:0:0,-10,-10 0/0:76.3363:17:17:609:0:0:0,-5.11751,-10 0/0:99:45:45:1644:0:0:0,-10,-10 0/0:49.2437:8:8:301:0:0:0,-2.40824,-10 0/0:99:25:25:906:0:0:0,-7.52575,-10 0/0:91.3871:22:22:750:0:0:0,-6.62266,-10 0/0:76.3363:17:17:643:0:0:0,-5.11751,-10 0/0:76.3363:17:17:591:0:0:0,-5.11751,-10 0/0:76.3363:17:17:633:0:0:0,-5.11751,-10 0/0:76.3363:17:17:624:0:0:0,-5.11751,-10 0/0:99:38:38:1375:0:0:0,-10,-10 0/0:43.2231:6:6:218:0:0:0,-1.80618,-10 0/0:46.2334:7:7:246:0:0:0,-2.10721,-10 0/0:88.3772:21:21:782:0:0:0,-6.32163,-10 0/0:58.2746:11:11:391:0:0:0,-3.31133,-10 0/0:85.3671:20:20:723:0:0:0,-6.0206,-10 0/0:55.2643:10:10:347:0:0:0,-3.0103,-10 0/0:67.3055:14:14:506:0:0:0,-4.21442,-10 0/0:99:25:25:905:0:0:0,-7.52575,-10 0/0:97.4053:24:24:865:0:0:0,-7.22472,-10 0/0:91.3871:22:22:811:0:0:0,-6.62266,-10 0/0:99:28:28:1037:0:0:0,-8.42884,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:99:33:32:1186:0:0:0,-9.63296,-10 0/0:88.3772:21:21:767:0:0:0,-6.32163,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:99:36:36:1326:0:0:0,-10,-10 0/0:99:57:57:2111:0:0:0,-10,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:94.3966:23:23:859:0:0:0,-6.92369,-10 0/0:99:48:48:1763:0:0:0,-10,-10 0/0:70.3158:15:15:554:0:0:0,-4.51545,-10 0/0:99:38:38:1437:0:0:0,-10,-10 0/0:64.2952:13:13:493:0:0:0,-3.91339,-10 0/0:64.2952:13:13:493:0:0:0,-3.91339,-10 0/0:99:45:45:1654:0:0:0,-10,-10 0/0:67.3055:14:14:528:0:0:0,-4.21442,-10 0/0:94.3966:23:23:857:0:0:0,-6.92369,-10 0/0:49.2437:8:8:302:0:0:0,-2.40824,-10 0/0:99:26:26:956:0:0:0,-7.82678,-10 0/0:58.2746:11:11:411:0:0:0,-3.31133,-10 0/0:99:33:33:1177:0:0:0,-9.93399,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:99:49:49:1778:0:0:0,-10,-10 0/0:79.3466:18:18:683:0:0:0,-5.41854,-10 0/0:70.3158:15:15:570:0:0:0,-4.51545,-10 0/0:76.3363:17:17:636:0:0:0,-5.11751,-10 0/0:88.3772:21:21:782:0:0:0,-6.32163,-10 0/0:70.3158:15:15:560:0:0:0,-4.51545,-10 0/0:99:28:28:1054:0:0:0,-8.42884,-10 0/0:70.3158:15:15:546:0:0:0,-4.51545,-10 0/0:94.3966:23:23:833:0:0:0,-6.92369,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:94.3966:23:23:860:0:0:0,-6.92369,-10 0/0:97.4053:24:24:885:0:0:0,-7.22472,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:67.3055:14:14:516:0:0:0,-4.21442,-10 0/0:73.3261:16:16:603:0:0:0,-4.81648,-10 0/0:70.3158:15:15:570:0:0:0,-4.51545,-10 0/0:37.2025:4:4:149:0:0:0,-1.20412,-10 0/0:52.254:9:9:342:0:0:0,-2.70927,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:97.4053:24:24:896:0:0:0,-7.22472,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/1:99:33:17:609:16:561:-10,0,-10 0/0:97.4053:24:24:907:0:0:0,-7.22472,-10 0/0:43.2231:6:6:225:0:0:0,-1.80618,-10 0/0:88.3772:21:21:797:0:0:0,-6.32163,-10 0/0:79.3466:18:18:672:0:0:0,-5.41854,-10 0/0:61.2849:12:12:445:0:0:0,-3.61236,-10 0/0:70.3158:15:15:561:0:0:0,-4.51545,-10 0/0:64.2952:13:13:489:0:0:0,-3.91339,-10 0/0:58.2746:11:11:408:0:0:0,-3.31133,-10 scaffold_102 979824 . G A 1167.96 . AB=0.55102;ABP=4.11819;AC=4;AF=0.0217391;AN=184;AO=46;CIGAR=1X;DP=1742;DPB=1742;DPRA=1.10066;EPP=7.73089;EPPR=3.13833;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9847;NS=92;NUMALT=1;ODDS=1.00196;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1717;QR=61734;RO=1696;RPP=102.898;RPPR=3659.82;RUN=1;SAF=28;SAP=7.73089;SAR=18;SRF=856;SRP=3.33807;SRR=840;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:75.2863:20:20:736:0:0:0,-6.0206,-10 0/0:39.1627:8:8:295:0:0:0,-2.40824,-10 0/0:51.2039:12:12:451:0:0:0,-3.61236,-10 0/0:51.2039:12:12:454:0:0:0,-3.61236,-10 0/0:75.2863:20:20:735:0:0:0,-6.0206,-10 0/0:27.1215:4:4:150:0:0:0,-1.20412,-10 0/0:99:36:36:1254:0:0:0,-10,-10 1/1:5.98834:18:0:0:18:680:-10,-5.41854,0 0/0:54.2142:13:13:494:0:0:0,-3.91339,-10 0/0:24.1112:3:3:111:0:0:0,-0.90309,-10 0/0:30.1318:5:5:167:0:0:0,-1.50515,-10 0/0:36.1524:7:7:259:0:0:0,-2.10721,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/1:99:24:9:324:15:553:-10,0,-10 0/1:99:25:13:489:12:446:-10,0,-10 0/0:60.2348:15:15:570:0:0:0,-4.51545,-10 0/0:93.3479:26:26:978:0:0:0,-7.82678,-10 0/0:42.173:9:9:333:0:0:0,-2.70927,-10 0/0:72.276:19:19:720:0:0:0,-5.71957,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:72.276:19:19:678:0:0:0,-5.71957,-10 0/0:87.3274:24:24:855:0:0:0,-7.22472,-10 0/0:51.2039:12:12:438:0:0:0,-3.61236,-10 0/0:90.3377:25:25:916:0:0:0,-7.52575,-10 0/0:96.3538:27:27:961:0:0:0,-8.12781,-10 0/0:99:29:29:1062:0:0:0,-8.72987,-10 0/0:90.3377:25:25:931:0:0:0,-7.52575,-10 0/0:66.2554:17:17:643:0:0:0,-5.11751,-10 0/0:69.2657:18:18:668:0:0:0,-5.41854,-10 0/0:99:28:28:990:0:0:0,-8.42884,-10 0/0:33.1421:6:6:221:0:0:0,-1.80618,-10 0/0:33.1421:6:6:223:0:0:0,-1.80618,-10 0/0:84.3172:23:23:851:0:0:0,-6.92369,-10 0/0:45.1833:10:10:348:0:0:0,-3.0103,-10 0/0:0.17807:16:15:553:1:38:-0.18764,0,-10 0/0:33.1421:6:6:221:0:0:0,-1.80618,-10 0/0:36.1524:7:7:257:0:0:0,-2.10721,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:72.276:19:19:664:0:0:0,-5.71957,-10 0/0:69.2657:18:18:620:0:0:0,-5.41854,-10 0/0:87.3274:24:24:905:0:0:0,-7.22472,-10 0/0:87.3274:24:24:859:0:0:0,-7.22472,-10 0/0:78.2965:21:21:767:0:0:0,-6.32163,-10 0/0:99:33:33:1243:0:0:0,-9.93399,-10 0/0:99:30:30:1098:0:0:0,-9.0309,-10 0/0:63.2451:16:16:593:0:0:0,-4.81648,-10 0/0:99:35:35:1268:0:0:0,-10,-10 0/0:81.3069:22:22:810:0:0:0,-6.62266,-10 0/0:72.276:19:19:690:0:0:0,-5.71957,-10 0/0:93.3479:26:26:972:0:0:0,-7.82678,-10 0/0:60.2348:15:15:566:0:0:0,-4.51545,-10 0/0:99:45:45:1648:0:0:0,-10,-10 0/0:60.2348:15:15:546:0:0:0,-4.51545,-10 0/0:39.1627:8:8:293:0:0:0,-2.40824,-10 0/0:99:35:35:1290:0:0:0,-10,-10 0/0:57.2245:14:14:512:0:0:0,-4.21442,-10 0/0:81.3069:22:22:790:0:0:0,-6.62266,-10 0/0:48.1936:11:11:407:0:0:0,-3.31133,-10 0/0:57.2245:14:14:523:0:0:0,-4.21442,-10 0/0:45.1833:10:10:326:0:0:0,-3.0103,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:84.3172:23:23:852:0:0:0,-6.92369,-10 0/0:99:41:41:1464:0:0:0,-10,-10 0/0:63.2451:16:16:583:0:0:0,-4.81648,-10 0/0:30.1318:5:5:165:0:0:0,-1.50515,-10 0/0:99:29:29:1017:0:0:0,-8.72987,-10 0/0:63.2451:16:16:605:0:0:0,-4.81648,-10 0/0:66.2554:17:17:621:0:0:0,-5.11751,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:45.1833:10:10:364:0:0:0,-3.0103,-10 0/0:72.276:19:19:711:0:0:0,-5.71957,-10 0/0:75.2863:20:20:729:0:0:0,-6.0206,-10 0/0:87.3274:24:24:848:0:0:0,-7.22472,-10 0/0:51.2039:12:12:396:0:0:0,-3.61236,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:51.2039:12:12:411:0:0:0,-3.61236,-10 0/0:60.2348:15:15:566:0:0:0,-4.51545,-10 0/0:51.2039:12:12:451:0:0:0,-3.61236,-10 0/0:45.1833:10:10:357:0:0:0,-3.0103,-10 0/0:57.2245:14:14:518:0:0:0,-4.21442,-10 0/0:99:42:42:1525:0:0:0,-10,-10 0/0:96.3538:27:27:955:0:0:0,-8.12781,-10 0/0:72.276:19:19:667:0:0:0,-5.71957,-10 0/0:69.2657:18:18:655:0:0:0,-5.41854,-10 0/0:96.3538:27:27:951:0:0:0,-8.12781,-10 0/0:24.1112:3:3:91:0:0:0,-0.90309,-8.49333 0/0:72.276:19:19:650:0:0:0,-5.71957,-10 0/0:48.1936:11:11:396:0:0:0,-3.31133,-10 0/0:21.1009:2:2:76:0:0:0,-0.60206,-7.22 0/0:69.2657:18:18:643:0:0:0,-5.41854,-10 0/0:69.2657:18:18:679:0:0:0,-5.41854,-10 0/0:39.1627:8:8:290:0:0:0,-2.40824,-10 scaffold_102 1201935 . A G 12357.8 . AB=0.619433;ABP=33.6131;AC=42;AF=0.228261;AN=184;AO=441;CIGAR=1X;DP=1719;DPB=1719;DPRA=1.09372;EPP=3.6061;EPPR=3.76137;GTI=1;LEN=1;MEANALT=1.07407;MQM=60;MQMR=59.9749;NS=92;NUMALT=1;ODDS=1.19158;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=16209;QR=45938;RO=1275;RPP=960.63;RPPR=2771.64;RUN=1;SAF=226;SAP=3.6061;SAR=215;SRF=627;SRP=3.76137;SRR=648;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:34.6046:13:13:464:0:0:0,-3.91339,-10 1/1:9.76527:8:0:0:8:300:-10,-2.40824,0 1/1:57.9301:24:0:0:24:884:-10,-7.22472,0 1/1:24.8168:13:0:0:13:481:-10,-3.91339,0 0/1:99:12:5:189:7:264:-10,0,-10 0/0:28.584:11:11:372:0:0:0,-3.31133,-10 0/0:91.8002:32:32:1125:0:0:0,-9.63296,-10 0/0:61.6973:22:22:782:0:0:0,-6.62266,-10 1/1:15.7859:11:0:0:10:349:-10,-3.0103,0 0/0:10.5222:5:5:184:0:0:0,-1.50515,-10 0/0:13.5325:6:6:199:0:0:0,-1.80618,-10 0/0:22.5634:9:9:342:0:0:0,-2.70927,-10 0/1:99:28:11:411:17:620:-10,0,-10 0/0:99:35:35:1319:0:0:0,-10,-10 0/1:99:29:13:480:16:593:-10,0,-10 0/0:67.7179:24:24:875:0:0:0,-7.22472,-10 0/0:52.6664:19:19:709:0:0:0,-5.71957,-10 0/0:13.5325:6:6:221:0:0:0,-1.80618,-10 0/0:61.6973:22:22:779:0:0:0,-6.62266,-10 0/0:97.8146:34:34:1256:0:0:0,-10,-10 0/0:43.6355:16:16:549:0:0:0,-4.81648,-10 0/0:67.7179:24:24:871:0:0:0,-7.22472,-10 0/0:25.5737:10:10:355:0:0:0,-3.0103,-10 0/0:61.6973:22:22:787:0:0:0,-6.62266,-10 0/0:64.7076:23:23:836:0:0:0,-6.92369,-10 0/0:46.6458:17:17:606:0:0:0,-5.11751,-10 0/0:52.6664:20:19:698:0:0:0,-5.71957,-10 0/0:46.6458:17:17:585:0:0:0,-5.11751,-10 0/0:55.6767:20:20:729:0:0:0,-6.0206,-10 0/0:64.7076:23:23:816:0:0:0,-6.92369,-10 0/0:22.5634:9:9:337:0:0:0,-2.70927,-10 0/0:19.5531:8:8:286:0:0:0,-2.40824,-10 0/0:28.584:11:11:391:0:0:0,-3.31133,-10 0/0:25.5737:10:10:367:0:0:0,-3.0103,-10 0/0:43.6355:16:16:583:0:0:0,-4.81648,-10 0/0:16.5428:7:7:264:0:0:0,-2.10721,-10 0/0:25.5737:10:10:355:0:0:0,-3.0103,-10 0/0:61.6973:22:22:786:0:0:0,-6.62266,-10 0/0:55.6767:20:20:750:0:0:0,-6.0206,-10 0/0:61.6973:22:22:785:0:0:0,-6.62266,-10 0/0:79.759:28:28:1038:0:0:0,-8.42884,-10 0/0:55.6767:20:20:742:0:0:0,-6.0206,-10 0/0:31.5943:12:12:449:0:0:0,-3.61236,-10 0/0:85.7793:30:30:1082:0:0:0,-9.0309,-10 0/0:64.7076:23:23:848:0:0:0,-6.92369,-10 0/0:52.6664:19:19:675:0:0:0,-5.71957,-10 0/0:99:36:36:1309:0:0:0,-10,-10 0/0:61.6973:22:22:784:0:0:0,-6.62266,-10 0/0:52.6664:19:19:691:0:0:0,-5.71957,-10 0/0:61.6973:22:22:791:0:0:0,-6.62266,-10 0/0:31.5943:12:12:420:0:0:0,-3.61236,-10 0/0:99:40:40:1410:0:0:0,-10,-10 0/0:31.5943:12:12:351:0:0:0,-3.61236,-10 0/0:22.5634:9:9:318:0:0:0,-2.70927,-10 0/0:99:37:37:1331:0:0:0,-10,-10 0/0:40.6252:15:15:522:0:0:0,-4.51545,-10 0/0:40.6252:15:15:552:0:0:0,-4.51545,-10 0/0:19.5531:8:8:299:0:0:0,-2.40824,-10 1/1:12.7756:9:0:0:9:319:-10,-2.70927,0 1/1:12.7756:9:0:0:9:315:-10,-2.70927,0 0/1:99:26:11:411:15:560:-10,0,-10 1/1:15.7859:10:0:0:10:373:-10,-3.0103,0 1/1:48.9472:38:1:38:37:1360:-10,-6.05936,0 0/1:99:21:11:374:10:343:-10,0,-10 1/1:36.858:17:0:0:17:638:-10,-5.11751,0 1/1:63.9507:26:0:0:26:979:-10,-7.82678,0 0/1:99:17:7:248:10:351:-10,0,-10 0/0:40.6252:15:15:564:0:0:0,-4.51545,-10 0/1:99:30:10:376:20:708:-10,0,-10 0/0:34.6046:13:13:491:0:0:0,-3.91339,-10 0/0:43.6355:16:16:574:0:0:0,-4.81648,-10 0/0:70.7282:25:25:836:0:0:0,-7.52575,-10 0/0:61.6973:22:22:802:0:0:0,-6.62266,-10 0/0:25.5737:10:10:374:0:0:0,-3.0103,-10 0/0:88.7892:31:31:1145:0:0:0,-9.33193,-10 0/0:10.5222:5:5:188:0:0:0,-1.50515,-10 0/0:46.6458:17:17:593:0:0:0,-5.11751,-10 0/1:33.19:13:1:38:12:456:-10,0,-1.00055 0/1:0.16963:4:0:0:4:152:-10,-1.20412,0 0/0:49.6561:18:18:631:0:0:0,-5.41854,-10 1/1:99:46:0:0:46:1709:-10,-10,0 1/1:75.9918:30:0:0:30:1111:-10,-9.0309,0 0/1:99:17:5:144:12:444:-10,0,-10 0/1:99:27:13:475:14:519:-10,0,-10 0/0:49.6561:18:18:654:0:0:0,-5.41854,-10 0/0:37.6149:14:14:516:0:0:0,-4.21442,-10 0/0:49.6561:18:18:673:0:0:0,-5.41854,-10 0/0:43.6355:16:16:541:0:0:0,-4.81648,-10 1/1:27.8271:14:0:0:14:514:-10,-4.21442,0 1/1:39.8683:18:0:0:18:665:-10,-5.41854,0 0/1:99:23:6:197:16:578:-10,0,-10 1/1:36.858:17:0:0:17:624:-10,-5.11751,0 scaffold_102 1201956 . A C 5841.53 . AB=0.515;ABP=3.40116;AC=23;AF=0.125;AN=184;AO=215;CIGAR=1X;DP=1733;DPB=1733;DPRA=0.945351;EPP=10.3731;EPPR=3.18396;GTI=5;LEN=1;MEANALT=1;MQM=60;MQMR=59.9788;NS=92;NUMALT=1;ODDS=0.356591;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7926;QR=55502;RO=1513;RPP=469.877;RPPR=3227.93;RUN=1;SAF=94;SAP=10.3731;SAR=121;SRF=758;SRP=3.02322;SRR=755;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.7941:13:13:491:0:0:0,-3.91339,-10 0/0:34.7426:8:8:303:0:0:0,-2.40824,-10 0/0:82.9072:24:24:878:0:0:0,-7.22472,-10 0/0:49.7941:13:13:462:0:0:0,-3.91339,-10 0/1:99:12:7:264:5:190:-10,0,-10 0/0:43.7735:11:11:415:0:0:0,-3.31133,-10 1/1:71.8378:32:0:0:32:1163:-10,-9.63296,0 0/0:76.8868:22:22:812:0:0:0,-6.62266,-10 0/0:43.7735:11:11:415:0:0:0,-3.31133,-10 0/1:0.0476956:5:0:0:5:190:-10,-1.50515,0 0/1:0.0959208:6:0:0:6:228:-10,-1.80618,0 0/0:37.7529:9:9:332:0:0:0,-2.70927,-10 0/0:94.9456:28:28:1031:0:0:0,-8.42884,-10 0/1:99:35:20:727:15:567:-10,0,-10 0/0:97.959:29:29:1075:0:0:0,-8.72987,-10 0/1:99:26:12:452:14:514:-10,0,-10 1/1:32.7039:19:0:0:19:693:-10,-5.71957,0 0/1:0.0959208:6:0:0:6:228:-10,-1.80618,0 0/0:73.8765:22:21:770:0:0:0,-6.32163,-10 0/0:99:34:34:1252:0:0:0,-10,-10 0/0:58.825:16:16:541:0:0:0,-4.81648,-10 0/0:82.9072:24:24:889:0:0:0,-7.22472,-10 0/0:40.7632:10:10:379:0:0:0,-3.0103,-10 0/0:76.8868:22:22:792:0:0:0,-6.62266,-10 0/0:79.8971:23:23:796:0:0:0,-6.92369,-10 0/0:61.8353:17:17:643:0:0:0,-5.11751,-10 0/0:70.8662:20:20:732:0:0:0,-6.0206,-10 0/0:61.8353:17:17:581:0:0:0,-5.11751,-10 0/0:70.8662:20:20:738:0:0:0,-6.0206,-10 0/0:79.8971:23:23:831:0:0:0,-6.92369,-10 0/0:40.7632:10:10:356:0:0:0,-3.0103,-10 0/0:34.7426:8:8:301:0:0:0,-2.40824,-10 0/0:43.7735:11:11:405:0:0:0,-3.31133,-10 0/0:40.7632:10:10:380:0:0:0,-3.0103,-10 0/0:58.825:16:16:594:0:0:0,-4.81648,-10 0/0:31.7323:7:7:266:0:0:0,-2.10721,-10 0/0:40.7632:10:10:378:0:0:0,-3.0103,-10 0/0:73.8765:22:21:785:0:0:0,-6.32163,-10 0/0:70.8662:20:20:736:0:0:0,-6.0206,-10 0/0:76.8868:22:22:830:0:0:0,-6.62266,-10 0/1:99:28:13:480:15:532:-10,0,-10 0/0:70.8662:20:20:753:0:0:0,-6.0206,-10 0/0:46.7838:12:12:450:0:0:0,-3.61236,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:85.9177:25:25:912:0:0:0,-7.52575,-10 0/0:67.8559:19:19:679:0:0:0,-5.71957,-10 0/0:99:38:38:1421:0:0:0,-10,-10 0/0:79.8971:23:23:849:0:0:0,-6.92369,-10 0/0:67.8559:19:19:718:0:0:0,-5.71957,-10 0/0:76.8868:22:22:787:0:0:0,-6.62266,-10 0/0:43.7735:12:11:410:0:0:0,-3.31133,-10 0/0:99:40:40:1458:0:0:0,-10,-10 0/0:46.7838:12:12:418:0:0:0,-3.61236,-10 0/0:37.7529:9:9:318:0:0:0,-2.70927,-10 0/0:99:37:37:1338:0:0:0,-10,-10 0/0:55.8147:15:15:568:0:0:0,-4.51545,-10 0/0:55.8147:15:15:548:0:0:0,-4.51545,-10 0/0:34.7426:8:8:300:0:0:0,-2.40824,-10 0/0:37.7529:9:9:330:0:0:0,-2.70927,-10 0/0:34.7426:9:8:303:0:0:0,-2.40824,-10 0/1:99:26:15:568:11:417:-10,0,-10 0/0:40.7632:10:10:378:0:0:0,-3.0103,-10 0/0:99:39:39:1376:0:0:0,-10,-10 0/1:99:21:10:378:11:394:-10,0,-10 0/0:61.8353:17:17:615:0:0:0,-5.11751,-10 0/0:88.9273:26:26:981:0:0:0,-7.82678,-10 0/0:61.8353:17:17:612:0:0:0,-5.11751,-10 1/1:20.6627:15:0:0:15:568:-10,-4.51545,0 0/1:99:30:20:753:10:380:-10,0,-10 1/1:14.6421:13:0:0:13:477:-10,-3.91339,0 0/0:58.825:16:16:561:0:0:0,-4.81648,-10 0/0:94.9456:28:28:992:0:0:0,-8.42884,-10 0/0:76.8868:22:22:836:0:0:0,-6.62266,-10 0/0:40.7632:10:10:379:0:0:0,-3.0103,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/1:0.0476956:5:0:0:5:187:-10,-1.50515,0 0/0:61.8353:17:17:620:0:0:0,-5.11751,-10 0/0:1.91001:13:12:456:1:38:-1.00055,0,-10 0/0:22.7014:4:4:146:0:0:0,-1.20412,-10 0/0:64.8456:18:18:669:0:0:0,-5.41854,-10 0/0:99:47:46:1669:0:0:0,-10,-10 0/0:99:30:30:1085:0:0:0,-9.0309,-10 0/0:61.8353:17:17:557:0:0:0,-5.11751,-10 0/0:91.9383:27:27:1021:0:0:0,-8.12781,-10 1/1:29.6936:18:0:0:18:667:-10,-5.41854,0 1/1:17.6524:14:0:0:14:493:-10,-4.21442,0 0/0:64.8456:18:18:684:0:0:0,-5.41854,-10 0/0:58.825:16:16:585:0:0:0,-4.81648,-10 0/0:52.8044:14:14:503:0:0:0,-4.21442,-10 0/0:67.8559:19:19:692:0:0:0,-5.71957,-10 0/0:79.8971:23:23:828:0:0:0,-6.92369,-10 0/0:61.8353:17:17:638:0:0:0,-5.11751,-10 scaffold_102 1201975 . C T 1215.38 . AB=0.554217;ABP=5.12945;AC=3;AF=0.0163043;AN=184;AO=48;CIGAR=1X;DP=1738;DPB=1738;DPRA=1.14151;EPP=3.0103;EPPR=3.07337;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.981;NS=92;NUMALT=1;ODDS=0.814309;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1723;QR=61731;RO=1687;RPP=107.241;RPPR=3503.11;RUN=1;SAF=24;SAP=3.0103;SAR=24;SRF=830;SRP=3.94865;SRR=857;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.0342:13:13:481:0:0:0,-3.91339,-10 0/0:29.9827:8:8:295:0:0:0,-2.40824,-10 0/0:78.1475:24:24:852:0:0:0,-7.22472,-10 0/0:21.6764:13:12:451:1:16:0,-1.19945,-10 0/0:42.0239:12:12:456:0:0:0,-3.61236,-10 0/0:39.0136:11:11:418:0:0:0,-3.31133,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/0:75.1372:23:23:824:0:0:0,-6.92369,-10 0/0:39.0136:11:11:389:0:0:0,-3.31133,-10 0/0:20.9518:5:5:179:0:0:0,-1.50515,-10 0/0:23.9621:6:6:224:0:0:0,-1.80618,-10 0/0:32.993:9:9:338:0:0:0,-2.70927,-10 0/1:99:28:11:404:17:612:-10,0,-10 0/0:99:35:35:1315:0:0:0,-10,-10 0/1:99:29:13:493:16:585:-10,0,-10 0/0:84.168:26:26:966:0:0:0,-7.82678,-10 0/0:63.096:19:19:712:0:0:0,-5.71957,-10 0/0:23.9621:6:6:228:0:0:0,-1.80618,-10 0/0:72.1269:22:22:814:0:0:0,-6.62266,-10 0/0:99:34:34:1282:0:0:0,-10,-10 0/0:54.0651:16:16:573:0:0:0,-4.81648,-10 0/0:78.1475:24:24:907:0:0:0,-7.22472,-10 0/0:36.0033:10:10:377:0:0:0,-3.0103,-10 0/0:72.1269:22:22:764:0:0:0,-6.62266,-10 0/0:75.1372:23:23:835:0:0:0,-6.92369,-10 0/0:57.0754:17:17:637:0:0:0,-5.11751,-10 0/0:66.1063:20:20:719:0:0:0,-6.0206,-10 0/0:57.0754:17:17:603:0:0:0,-5.11751,-10 0/0:66.1063:20:20:757:0:0:0,-6.0206,-10 0/0:75.1372:23:23:859:0:0:0,-6.92369,-10 0/0:32.993:10:9:342:0:0:0,-2.70927,-10 0/0:29.9827:8:8:297:0:0:0,-2.40824,-10 0/0:1.48528:11:10:370:1:27:-0.430063,0,-10 0/0:36.0033:10:10:375:0:0:0,-3.0103,-10 0/0:54.0651:16:16:594:0:0:0,-4.81648,-10 0/0:26.9724:7:7:260:0:0:0,-2.10721,-10 0/0:36.0033:10:10:368:0:0:0,-3.0103,-10 0/0:75.1372:23:23:823:0:0:0,-6.92369,-10 0/0:69.1166:21:21:739:0:0:0,-6.32163,-10 0/0:69.1166:21:21:766:0:0:0,-6.32163,-10 0/0:93.1979:29:29:1026:0:0:0,-8.72987,-10 0/0:66.1063:20:20:719:0:0:0,-6.0206,-10 0/0:42.0239:12:12:430:0:0:0,-3.61236,-10 0/0:96.2071:30:30:1111:0:0:0,-9.0309,-10 0/0:81.1578:25:25:902:0:0:0,-7.52575,-10 0/0:63.096:19:19:668:0:0:0,-5.71957,-10 0/0:99:38:38:1376:0:0:0,-10,-10 0/0:75.1372:23:23:864:0:0:0,-6.92369,-10 0/0:63.096:19:19:667:0:0:0,-5.71957,-10 0/0:72.1269:22:22:782:0:0:0,-6.62266,-10 0/0:42.0239:12:12:431:0:0:0,-3.61236,-10 0/0:99:40:40:1465:0:0:0,-10,-10 0/0:42.0239:12:12:450:0:0:0,-3.61236,-10 0/0:32.993:9:9:314:0:0:0,-2.70927,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:51.0548:15:15:563:0:0:0,-4.51545,-10 0/0:51.0548:15:15:559:0:0:0,-4.51545,-10 0/0:32.993:9:9:338:0:0:0,-2.70927,-10 0/0:32.993:9:9:333:0:0:0,-2.70927,-10 0/0:29.9827:9:8:297:0:0:0,-2.40824,-10 0/0:84.168:26:26:978:0:0:0,-7.82678,-10 0/0:36.0033:10:10:347:0:0:0,-3.0103,-10 0/0:99:39:39:1447:0:0:0,-10,-10 0/0:69.1166:21:21:765:0:0:0,-6.32163,-10 0/0:57.0754:17:17:630:0:0:0,-5.11751,-10 0/1:99:26:13:493:13:483:-10,0,-10 0/0:54.0651:17:16:562:0:0:0,-4.81648,-10 0/0:51.0548:15:15:566:0:0:0,-4.51545,-10 0/0:96.2071:30:30:1116:0:0:0,-9.0309,-10 0/0:45.0342:13:13:457:0:0:0,-3.91339,-10 0/0:54.0651:16:16:587:0:0:0,-4.81648,-10 0/0:93.1979:29:29:1056:0:0:0,-8.72987,-10 0/0:72.1269:22:22:812:0:0:0,-6.62266,-10 0/0:36.0033:10:10:380:0:0:0,-3.0103,-10 0/0:99:31:31:1118:0:0:0,-9.33193,-10 0/0:20.9518:5:5:190:0:0:0,-1.50515,-10 0/0:57.0754:17:17:613:0:0:0,-5.11751,-10 0/0:45.0342:13:13:470:0:0:0,-3.91339,-10 0/0:17.9415:4:4:150:0:0:0,-1.20412,-10 0/0:60.0857:18:18:682:0:0:0,-5.41854,-10 0/0:99:47:47:1688:0:0:0,-10,-10 0/0:96.2071:30:30:1097:0:0:0,-9.0309,-10 0/0:57.0754:17:17:552:0:0:0,-5.11751,-10 0/0:87.1781:27:27:1003:0:0:0,-8.12781,-10 0/0:60.0857:18:18:644:0:0:0,-5.41854,-10 0/0:48.0445:14:14:486:0:0:0,-4.21442,-10 0/0:60.0857:18:18:682:0:0:0,-5.41854,-10 0/0:54.0651:16:16:596:0:0:0,-4.81648,-10 0/0:48.0445:14:14:495:0:0:0,-4.21442,-10 0/0:63.096:19:19:682:0:0:0,-5.71957,-10 0/0:75.1372:23:23:843:0:0:0,-6.92369,-10 0/0:57.0754:17:17:638:0:0:0,-5.11751,-10 scaffold_102 1245424 . A G 226.295 . AB=0.454545;ABP=3.40511;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=1284;DPB=1284;DPRA=1.58637;EPP=10.8276;EPPR=7.27143;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9929;NS=92;NUMALT=1;ODDS=7.34377;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=380;QR=46700;RO=1274;RPP=24.725;RPPR=2691.85;RUN=1;SAF=8;SAP=10.8276;SAR=2;SRF=653;SRP=4.75566;SRR=621;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.9985:11:11:394:0:0:0,-3.31133,-10 0/0:40.9367:5:5:189:0:0:0,-1.50515,-10 0/0:65.0191:13:13:480:0:0:0,-3.91339,-10 0/0:43.947:6:6:227:0:0:0,-1.80618,-10 0/0:49.9676:8:8:299:0:0:0,-2.40824,-10 0/0:40.9367:5:5:167:0:0:0,-1.50515,-10 0/0:99:26:26:954:0:0:0,-7.82678,-10 0/0:89.1013:21:21:744:0:0:0,-6.32163,-10 0/0:80.0706:18:18:657:0:0:0,-5.41854,-10 0/0:37.9264:4:4:149:0:0:0,-1.20412,-10 0/0:55.9882:10:10:378:0:0:0,-3.0103,-10 0/0:37.9264:4:4:152:0:0:0,-1.20412,-10 0/0:92.1113:22:22:763:0:0:0,-6.62266,-10 0/0:99:34:34:1232:0:0:0,-10,-10 0/0:71.0397:15:15:537:0:0:0,-4.51545,-10 0/0:68.0294:14:14:510:0:0:0,-4.21442,-10 0/0:98.1304:24:24:871:0:0:0,-7.22472,-10 0/0:40.9367:5:5:180:0:0:0,-1.50515,-10 0/0:80.0706:18:18:669:0:0:0,-5.41854,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:55.9882:10:10:379:0:0:0,-3.0103,-10 0/0:80.0706:18:18:658:0:0:0,-5.41854,-10 0/0:52.9779:9:9:339:0:0:0,-2.70927,-10 0/0:58.9985:11:11:406:0:0:0,-3.31133,-10 0/0:49.9676:8:8:301:0:0:0,-2.40824,-10 0/0:80.0706:18:18:649:0:0:0,-5.41854,-10 0/0:71.0397:15:15:561:0:0:0,-4.51545,-10 0/0:52.9779:9:9:328:0:0:0,-2.70927,-10 0/0:68.0294:14:14:512:0:0:0,-4.21442,-10 0/0:89.1013:21:21:754:0:0:0,-6.32163,-10 0/0:58.9985:11:11:389:0:0:0,-3.31133,-10 0/0:62.0088:12:12:438:0:0:0,-3.61236,-10 0/0:55.9882:10:10:380:0:0:0,-3.0103,-10 0/0:52.9779:9:9:337:0:0:0,-2.70927,-10 0/0:62.0088:12:12:439:0:0:0,-3.61236,-10 0/0:37.9264:4:4:152:0:0:0,-1.20412,-10 0/0:86.0911:20:20:753:0:0:0,-6.0206,-10 0/0:99:25:25:903:0:0:0,-7.52575,-10 0/0:58.9985:11:11:413:0:0:0,-3.31133,-10 0/0:65.0191:13:13:481:0:0:0,-3.91339,-10 0/0:86.0911:20:20:759:0:0:0,-6.0206,-10 0/0:55.9882:10:10:370:0:0:0,-3.0103,-10 0/0:71.0397:15:15:564:0:0:0,-4.51545,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:65.0191:13:13:466:0:0:0,-3.91339,-10 0/0:58.9985:11:11:359:0:0:0,-3.31133,-10 0/0:99:41:41:1521:0:0:0,-10,-10 0/0:52.9779:9:9:317:0:0:0,-2.70927,-10 0/0:52.9779:9:9:338:0:0:0,-2.70927,-10 0/0:92.1113:22:22:792:0:0:0,-6.62266,-10 0/0:52.9779:9:9:338:0:0:0,-2.70927,-10 0/0:77.0603:17:17:630:0:0:0,-5.11751,-10 0/0:46.9573:7:7:257:0:0:0,-2.10721,-10 0/0:34.9161:3:3:107:0:0:0,-0.90309,-9.98667 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:40.9367:5:5:185:0:0:0,-1.50515,-10 0/0:65.0191:13:13:486:0:0:0,-3.91339,-10 0/0:49.9676:8:8:294:0:0:0,-2.40824,-10 0/0:52.9779:9:9:335:0:0:0,-2.70927,-10 0/0:40.9367:5:5:190:0:0:0,-1.50515,-10 0/0:86.0911:20:20:754:0:0:0,-6.0206,-10 0/0:77.0603:17:17:640:0:0:0,-5.11751,-10 0/0:98.1304:24:24:871:0:0:0,-7.22472,-10 0/0:65.0191:13:13:493:0:0:0,-3.91339,-10 0/0:71.0397:15:15:539:0:0:0,-4.51545,-10 0/0:95.1211:23:23:843:0:0:0,-6.92369,-10 0/0:80.0706:18:18:646:0:0:0,-5.41854,-10 0/0:65.0191:13:13:462:0:0:0,-3.91339,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:58.9985:11:11:411:0:0:0,-3.31133,-10 0/0:65.0191:13:13:462:0:0:0,-3.91339,-10 0/1:99:22:12:441:10:380:-10,0,-10 0/0:71.0397:15:15:559:0:0:0,-4.51545,-10 0/0:49.9676:8:8:304:0:0:0,-2.40824,-10 0/0:86.0911:20:20:705:0:0:0,-6.0206,-10 0/0:58.9985:11:11:414:0:0:0,-3.31133,-10 0/0:55.9882:10:10:372:0:0:0,-3.0103,-10 0/0:43.947:6:6:216:0:0:0,-1.80618,-10 0/0:34.9161:3:3:107:0:0:0,-0.90309,-9.98667 0/0:71.0397:15:15:556:0:0:0,-4.51545,-10 0/0:86.0911:20:20:718:0:0:0,-6.0206,-10 0/0:77.0603:17:17:617:0:0:0,-5.11751,-10 0/0:58.9985:11:11:401:0:0:0,-3.31133,-10 0/0:62.0088:12:12:455:0:0:0,-3.61236,-10 0/0:99:25:25:925:0:0:0,-7.52575,-10 0/0:34.9161:3:3:113:0:0:0,-0.90309,-10 0/0:46.9573:7:7:242:0:0:0,-2.10721,-10 0/0:40.9367:5:5:188:0:0:0,-1.50515,-10 0/0:31.9058:2:2:74:0:0:0,-0.60206,-7.03 0/0:65.0191:13:13:470:0:0:0,-3.91339,-10 0/0:49.9676:8:8:272:0:0:0,-2.40824,-10 0/0:74.05:16:16:596:0:0:0,-4.81648,-10 scaffold_102 1622246 . G A 1555.97 . AB=0.453125;ABP=4.23175;AC=6;AF=0.0326087;AN=184;AO=70;CIGAR=1X;DP=1942;DPB=1942;DPRA=1.48809;EPP=13.0611;EPPR=5.16084;GTI=0;LEN=1;MEANALT=1;MQM=59.6714;MQMR=59.8356;NS=92;NUMALT=1;ODDS=1.36145;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2300;QR=65351;RO=1867;RPP=155.013;RPPR=4048.47;RUN=1;SAF=26;SAP=13.0611;SAR=44;SRF=956;SRP=5.36554;SRR=911;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.6488:14:14:492:0:0:0,-4.21442,-10 0/0:31.5767:7:7:241:0:0:0,-2.10721,-10 0/0:79.7415:23:23:787:0:0:0,-6.92369,-10 0/0:31.5767:7:7:265:0:0:0,-2.10721,-10 0/0:49.6385:13:13:478:0:0:0,-3.91339,-10 0/0:31.5767:7:7:231:0:0:0,-2.10721,-10 0/0:99:39:39:1429:0:0:0,-10,-10 0/0:91.7824:27:27:935:0:0:0,-8.12781,-10 0/0:64.69:18:18:571:0:0:0,-5.41854,-10 0/0:22.5458:4:4:151:0:0:0,-1.20412,-10 0/0:46.6282:12:12:423:0:0:0,-3.61236,-10 0/0:28.5664:6:6:202:0:0:0,-1.80618,-10 0/0:85.7621:25:25:874:0:0:0,-7.52575,-10 0/0:99:37:37:1266:0:0:0,-10,-10 0/0:79.7415:23:23:839:0:0:0,-6.92369,-10 0/0:88.7723:26:26:851:0:0:0,-7.82678,-10 0/0:73.7209:21:21:705:0:0:0,-6.32163,-10 0/0:49.6385:13:13:464:0:0:0,-3.91339,-10 0/0:67.7003:19:19:697:0:0:0,-5.71957,-10 0/0:99:38:37:1309:0:0:0,-10,-10 0/0:82.7518:24:24:879:0:0:0,-7.22472,-10 0/0:85.7621:25:25:857:0:0:0,-7.52575,-10 0/0:43.6179:11:11:407:0:0:0,-3.31133,-10 0/0:88.7723:26:26:942:0:0:0,-7.82678,-10 0/0:67.7003:19:19:677:0:0:0,-5.71957,-10 0/0:73.7209:21:21:712:0:0:0,-6.32163,-10 0/0:67.7003:19:19:663:0:0:0,-5.71957,-10 0/0:70.7106:20:20:679:0:0:0,-6.0206,-10 0/0:58.6694:16:16:520:0:0:0,-4.81648,-10 0/0:99:31:31:1095:0:0:0,-9.33193,-10 0/0:19.5355:3:3:100:0:0:0,-0.90309,-9.33333 0/0:40.6076:10:10:334:0:0:0,-3.0103,-10 0/0:61.6797:17:17:606:0:0:0,-5.11751,-10 0/0:49.6385:13:13:438:0:0:0,-3.91339,-10 0/0:99:30:30:1020:0:0:0,-9.0309,-10 0/0:46.6282:12:12:428:0:0:0,-3.61236,-10 0/0:64.69:18:18:649:0:0:0,-5.41854,-10 0/0:82.7518:24:24:799:0:0:0,-7.22472,-10 0/0:40.6076:10:10:325:0:0:0,-3.0103,-10 0/0:52.6488:14:14:445:0:0:0,-4.21442,-10 0/0:97.8021:30:29:1006:0:0:0,-8.72987,-10 0/0:49.6385:13:13:479:0:0:0,-3.91339,-10 0/0:64.69:19:18:666:0:0:0,-5.41854,-10 0/0:99:43:43:1514:0:0:0,-10,-10 0/0:52.6488:14:14:461:0:0:0,-4.21442,-10 0/0:61.6797:17:17:571:0:0:0,-5.11751,-10 0/0:99:38:38:1347:0:0:0,-10,-10 0/0:99:33:33:1175:0:0:0,-9.93399,-10 0/0:52.6488:14:14:509:0:0:0,-4.21442,-10 0/0:99:39:39:1310:0:0:0,-10,-10 0/0:49.6385:13:13:431:0:0:0,-3.91339,-10 0/0:99:44:44:1546:0:0:0,-10,-10 0/0:61.6797:17:17:621:0:0:0,-5.11751,-10 0/0:46.6282:12:12:454:0:0:0,-3.61236,-10 0/0:99:48:48:1651:0:0:0,-10,-10 0/0:46.6282:12:12:448:0:0:0,-3.61236,-10 0/0:91.7824:27:27:911:0:0:0,-8.12781,-10 0/0:34.587:8:8:251:0:0:0,-2.40824,-10 0/0:64.69:18:18:632:0:0:0,-5.41854,-10 0/0:34.587:8:8:278:0:0:0,-2.40824,-10 0/0:99:39:39:1408:0:0:0,-10,-10 0/0:99:30:30:1055:0:0:0,-9.0309,-10 0/0:99:49:48:1708:1:16:0,-10,-10 0/0:82.7518:24:24:893:0:0:0,-7.22472,-10 0/0:58.6694:16:16:557:0:0:0,-4.81648,-10 0/0:99:33:33:1095:0:0:0,-9.93399,-10 0/0:67.7003:19:19:624:0:0:0,-5.71957,-10 0/0:37.5973:10:9:290:0:0:0,-2.70927,-10 0/1:99:38:24:888:14:493:-10,0,-10 1/1:19.1445:22:0:0:22:698:-10,-6.62266,0 0/0:99:38:38:1348:0:0:0,-10,-10 0/0:99:43:43:1528:0:0:0,-10,-10 0/0:79.7415:24:23:837:0:0:0,-6.92369,-10 0/0:82.7518:24:24:839:0:0:0,-7.22472,-10 0/0:88.7723:26:26:901:0:0:0,-7.82678,-10 1/1:7.10333:18:0:0:18:600:-10,-5.41854,0 0/0:55.6591:15:15:543:0:0:0,-4.51545,-10 0/0:46.6282:12:12:419:0:0:0,-3.61236,-10 0/0:22.5458:4:4:143:0:0:0,-1.20412,-10 0/0:70.7106:20:20:671:0:0:0,-6.0206,-10 0/0:99:41:41:1413:0:0:0,-10,-10 0/0:99:33:33:1168:0:0:0,-9.93399,-10 0/0:76.7312:22:22:768:0:0:0,-6.62266,-10 0/0:79.7415:23:23:843:0:0:0,-6.92369,-10 0/1:99:26:11:375:15:493:-10,0,-10 0/0:22.5458:4:4:142:0:0:0,-1.20412,-10 0/0:58.6694:16:16:563:0:0:0,-4.81648,-10 0/0:55.6591:15:15:556:0:0:0,-4.51545,-10 0/0:40.6076:10:10:344:0:0:0,-3.0103,-10 0/0:40.6076:10:10:373:0:0:0,-3.0103,-10 0/0:58.6694:16:16:531:0:0:0,-4.81648,-10 0/0:49.6385:13:13:482:0:0:0,-3.91339,-10 scaffold_102 1622247 . T C 589.228 . AB=0.5;ABP=3.0103;AC=2;AF=0.0108696;AN=184;AO=27;CIGAR=1X;DP=1941;DPB=1941;DPRA=1.44246;EPP=3.09072;EPPR=3.83866;GTI=0;LEN=1;MEANALT=1;MQM=59.8148;MQMR=59.8409;NS=92;NUMALT=1;ODDS=7.2869;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=878;QR=67616;RO=1911;RPP=61.6401;RPPR=4144.01;RUN=1;SAF=13;SAP=3.09072;SAR=14;SRF=970;SRP=3.96593;SRR=941;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.7686:14:14:481:0:0:0,-4.21442,-10 0/0:43.6965:7:7:248:0:0:0,-2.10721,-10 0/0:91.8598:23:23:820:0:0:0,-6.92369,-10 0/0:43.6965:7:7:265:0:0:0,-2.10721,-10 0/0:61.7583:13:13:458:0:0:0,-3.91339,-10 0/0:43.6965:7:7:221:0:0:0,-2.10721,-10 0/0:99:39:39:1430:0:0:0,-10,-10 0/0:99:27:27:953:0:0:0,-8.12781,-10 0/0:76.8098:18:18:623:0:0:0,-5.41854,-10 0/0:34.6656:4:4:152:0:0:0,-1.20412,-10 0/0:58.748:12:12:454:0:0:0,-3.61236,-10 0/0:40.6862:6:6:202:0:0:0,-1.80618,-10 0/0:97.8759:25:25:845:0:0:0,-7.52575,-10 0/0:99:37:37:1235:0:0:0,-10,-10 0/0:91.8598:23:23:867:0:0:0,-6.92369,-10 0/1:99:26:11:411:15:532:-10,0,-10 0/0:85.8403:21:21:740:0:0:0,-6.32163,-10 0/0:61.7583:13:13:443:0:0:0,-3.91339,-10 0/0:79.82:19:19:694:0:0:0,-5.71957,-10 0/0:99:38:37:1319:1:14:0,-8.45936,-10 0/0:94.8716:24:24:907:0:0:0,-7.22472,-10 0/0:94.8716:25:24:838:0:0:0,-7.22472,-10 0/0:55.7377:11:11:415:0:0:0,-3.31133,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:79.82:19:19:635:0:0:0,-5.71957,-10 0/0:85.8403:21:21:727:0:0:0,-6.32163,-10 0/0:79.82:19:19:689:0:0:0,-5.71957,-10 0/0:82.8302:20:20:737:0:0:0,-6.0206,-10 0/0:70.7892:16:16:581:0:0:0,-4.81648,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:31.6553:3:3:91:0:0:0,-0.90309,-8.49333 0/0:52.7274:10:10:361:0:0:0,-3.0103,-10 0/0:73.7995:17:17:583:0:0:0,-5.11751,-10 0/0:61.7583:13:13:467:0:0:0,-3.91339,-10 0/0:99:30:30:1075:0:0:0,-9.0309,-10 0/0:58.748:12:12:452:0:0:0,-3.61236,-10 0/0:76.8098:18:18:650:0:0:0,-5.41854,-10 0/0:94.8716:24:24:886:0:0:0,-7.22472,-10 0/0:52.7274:10:10:333:0:0:0,-3.0103,-10 0/0:64.7686:14:14:452:0:0:0,-4.21442,-10 0/0:99:30:29:1065:0:0:0,-8.72987,-10 0/0:61.7583:13:13:458:0:0:0,-3.91339,-10 0/0:79.82:19:19:691:0:0:0,-5.71957,-10 0/0:99:43:43:1531:0:0:0,-10,-10 0/0:64.7686:14:14:463:0:0:0,-4.21442,-10 0/0:73.7995:17:17:614:0:0:0,-5.11751,-10 0/0:99:38:38:1352:0:0:0,-10,-10 0/0:99:33:33:1102:0:0:0,-9.93399,-10 0/0:64.7686:14:14:508:0:0:0,-4.21442,-10 0/0:99:39:38:1383:0:0:0,-10,-10 0/0:61.7583:13:13:418:0:0:0,-3.91339,-10 0/0:99:44:44:1571:0:0:0,-10,-10 0/0:70.7892:16:16:557:0:0:0,-4.81648,-10 0/0:58.748:12:12:449:0:0:0,-3.61236,-10 0/0:99:48:48:1717:0:0:0,-10,-10 0/0:58.748:12:12:420:0:0:0,-3.61236,-10 0/0:99:27:27:926:0:0:0,-8.12781,-10 0/0:46.7068:8:8:238:0:0:0,-2.40824,-10 0/0:76.8098:18:18:656:0:0:0,-5.41854,-10 0/0:46.7068:8:8:278:0:0:0,-2.40824,-10 0/0:99:39:39:1366:0:0:0,-10,-10 0/0:99:30:30:1018:0:0:0,-9.0309,-10 0/0:99:49:49:1683:0:0:0,-10,-10 0/0:94.8716:24:24:901:0:0:0,-7.22472,-10 0/0:70.7892:16:16:581:0:0:0,-4.81648,-10 0/0:99:33:33:1094:0:0:0,-9.93399,-10 0/0:79.82:19:19:669:0:0:0,-5.71957,-10 0/0:52.7274:10:10:342:0:0:0,-3.0103,-10 0/0:99:38:38:1386:0:0:0,-10,-10 0/0:88.8503:22:22:692:0:0:0,-6.62266,-10 0/0:99:38:38:1352:0:0:0,-10,-10 0/0:99:43:43:1510:0:0:0,-10,-10 0/0:94.8716:24:24:840:0:0:0,-7.22472,-10 0/0:94.8716:24:24:854:0:0:0,-7.22472,-10 0/0:99:26:26:906:0:0:0,-7.82678,-10 0/0:76.8098:18:18:655:0:0:0,-5.41854,-10 0/0:67.7789:15:15:508:0:0:0,-4.51545,-10 0/0:58.748:12:12:441:0:0:0,-3.61236,-10 0/0:34.6656:4:4:152:0:0:0,-1.20412,-10 0/0:82.8302:20:20:681:0:0:0,-6.0206,-10 0/0:99:41:41:1446:0:0:0,-10,-10 0/0:99:33:33:1169:0:0:0,-9.93399,-10 0/0:88.8503:22:22:745:0:0:0,-6.62266,-10 0/0:91.8598:23:23:841:0:0:0,-6.92369,-10 0/1:99:26:15:518:11:332:-10,0,-10 0/0:34.6656:4:4:130:0:0:0,-1.20412,-10 0/0:70.7892:16:16:576:0:0:0,-4.81648,-10 0/0:67.7789:15:15:563:0:0:0,-4.51545,-10 0/0:52.7274:10:10:342:0:0:0,-3.0103,-10 0/0:52.7274:10:10:379:0:0:0,-3.0103,-10 0/0:70.7892:16:16:599:0:0:0,-4.81648,-10 0/0:61.7583:13:13:465:0:0:0,-3.91339,-10 scaffold_102 1668427 . C T 3151.74 . AB=0.572917;ABP=7.44372;AC=15;AF=0.0824176;AN=182;AO=122;CIGAR=1X;DP=1175;DPB=1175;DPRA=1.27786;EPP=3.65106;EPPR=5.12398;GTI=2;LEN=1;MEANALT=1.08333;MQM=60;MQMR=59.9316;NS=91;NUMALT=1;ODDS=0.589617;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4458;QR=37978;RO=1052;RPP=267.93;RPPR=2278.72;RUN=1;SAF=58;SAP=3.65106;SAR=64;SRF=543;SRP=5.39644;SRR=509;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:6.66563:10:0:0:10:373:-10,-3.0103,0 0/0:17.9396:4:4:144:0:0:0,-1.20412,-10 1/1:27.7377:17:0:0:17:630:-10,-5.11751,0 0/0:26.9705:7:7:252:0:0:0,-2.10721,-10 0/0:23.9602:6:6:225:0:0:0,-1.80618,-10 0/0:17.9396:4:4:152:0:0:0,-1.20412,-10 0/0:90.1868:28:28:1006:0:0:0,-8.42884,-10 0/0:78.1456:24:24:851:0:0:0,-7.22472,-10 0/0:20.9499:5:5:190:0:0:0,-1.50515,-10 0/0:20.9499:5:5:177:0:0:0,-1.50515,-10 0/0:23.9602:6:6:216:0:0:0,-1.80618,-10 0/0:45.0323:13:13:491:0:0:0,-3.91339,-10 0/0:72.125:22:22:804:0:0:0,-6.62266,-10 0/0:60.0838:18:18:648:0:0:0,-5.41854,-10 0/0:32.9911:9:9:304:0:0:0,-2.70927,-10 0/0:36.0014:10:10:331:0:0:0,-3.0103,-10 0/0:75.1353:23:23:838:0:0:0,-6.92369,-10 0/0:32.9911:9:9:320:0:0:0,-2.70927,-10 0/0:54.0632:16:16:605:0:0:0,-4.81648,-10 0/0:57.0735:17:17:602:0:0:0,-5.11751,-10 0/0:42.022:12:12:419:0:0:0,-3.61236,-10 0/0:96.2072:30:30:1088:0:0:0,-9.0309,-10 0/0:20.9499:5:5:189:0:0:0,-1.50515,-10 0/0:66.1044:20:20:736:0:0:0,-6.0206,-10 0/0:81.1559:25:25:893:0:0:0,-7.52575,-10 0/0:39.0117:11:11:387:0:0:0,-3.31133,-10 0/0:45.0323:13:13:486:0:0:0,-3.91339,-10 0/0:20.9499:5:5:162:0:0:0,-1.50515,-10 0/0:48.0426:14:14:514:0:0:0,-4.21442,-10 0/0:54.0632:16:16:575:0:0:0,-4.81648,-10 .:.:.:.:.:.:.:. 0/0:36.0014:10:10:376:0:0:0,-3.0103,-10 0/0:32.9911:9:9:328:0:0:0,-2.70927,-10 0/0:32.9911:9:9:339:0:0:0,-2.70927,-10 0/0:48.0426:14:14:505:0:0:0,-4.21442,-10 0/0:26.9705:7:7:238:0:0:0,-2.10721,-10 0/0:32.9911:9:9:337:0:0:0,-2.70927,-10 0/0:36.0014:10:10:352:0:0:0,-3.0103,-10 0/0:32.9911:9:9:333:0:0:0,-2.70927,-10 0/0:29.9808:8:8:299:0:0:0,-2.40824,-10 0/0:54.0632:16:16:595:0:0:0,-4.81648,-10 0/0:42.022:12:12:432:0:0:0,-3.61236,-10 0/0:36.0014:10:10:377:0:0:0,-3.0103,-10 0/1:99:25:10:350:15:544:-10,0,-10 0/0:39.0117:11:11:415:0:0:0,-3.31133,-10 0/0:36.0014:10:10:341:0:0:0,-3.0103,-10 0/0:99:34:34:1215:0:0:0,-10,-10 0/0:60.0838:18:18:635:0:0:0,-5.41854,-10 0/0:45.0323:13:13:464:0:0:0,-3.91339,-10 0/0:93.197:29:29:1038:0:0:0,-8.72987,-10 0/0:42.022:12:12:433:0:0:0,-3.61236,-10 0/0:81.1559:25:25:932:0:0:0,-7.52575,-10 0/0:39.0117:11:11:403:0:0:0,-3.31133,-10 0/0:8.90874:1:1:38:0:0:0,-0.30103,-3.8 0/0:78.1456:24:24:871:0:0:0,-7.22472,-10 0/0:32.9911:9:9:317:0:0:0,-2.70927,-10 0/0:45.0323:13:13:460:0:0:0,-3.91339,-10 0/0:20.9499:5:5:190:0:0:0,-1.50515,-10 0/0:36.0014:10:10:358:0:0:0,-3.0103,-10 0/0:14.9293:3:3:109:0:0:0,-0.90309,-10 0/1:99:20:11:413:9:342:-10,0,-10 0/0:14.9293:3:3:112:0:0:0,-0.90309,-10 0/0:43.0583:30:28:1003:2:35:0,-3.06741,-10 0/1:93.2152:8:2:76:5:172:-10,0,-6.20834 0/0:48.0426:14:14:527:0:0:0,-4.21442,-10 0/0:51.0529:15:15:511:0:0:0,-4.51545,-10 0/0:36.0014:10:10:367:0:0:0,-3.0103,-10 0/0:42.022:12:12:428:0:0:0,-3.61236,-10 0/0:66.1044:20:20:739:0:0:0,-6.0206,-10 0/0:36.0014:10:10:344:0:0:0,-3.0103,-10 0/0:48.0426:14:14:516:0:0:0,-4.21442,-10 0/0:60.0838:18:18:611:0:0:0,-5.41854,-10 0/0:42.022:12:12:437:0:0:0,-3.61236,-10 0/0:45.0323:13:13:466:0:0:0,-3.91339,-10 0/0:66.1044:20:20:722:0:0:0,-6.0206,-10 0/0:29.9808:8:8:292:0:0:0,-2.40824,-10 0/0:45.0323:13:13:473:0:0:0,-3.91339,-10 0/1:0.0493069:6:0:0:6:228:-10,-1.80618,0 0/1:0.00613283:3:0:0:3:113:-10,-0.90309,0 0/0:17.9396:4:4:143:0:0:0,-1.20412,-10 1/1:48.8098:24:0:0:24:882:-10,-7.22472,0 1/1:18.7068:14:0:0:14:522:-10,-4.21442,0 0/1:99:18:12:414:6:228:-10,0,-10 0/1:99:16:5:161:11:389:-10,0,-10 0/0:45.0323:13:13:460:0:0:0,-3.91339,-10 0/0:14.9293:3:3:109:0:0:0,-0.90309,-10 0/0:29.9808:8:8:289:0:0:0,-2.40824,-10 0/0:32.9911:9:9:311:0:0:0,-2.70927,-10 0/0:14.9293:3:3:112:0:0:0,-0.90309,-10 0/0:42.022:12:12:453:0:0:0,-3.61236,-10 0/0:42.022:12:12:429:0:0:0,-3.61236,-10 0/0:36.0014:10:10:375:0:0:0,-3.0103,-10 scaffold_102 1668431 . G C 5363.71 . AB=0.696;ABP=44.7199;AC=30;AF=0.164835;AN=182;AO=208;CIGAR=1X;DP=1175;DPB=1175;DPRA=0.88267;EPP=4.51363;EPPR=3.28201;GTI=6;LEN=1;MEANALT=1;MQM=60;MQMR=59.9204;NS=91;NUMALT=1;ODDS=0.897703;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7474;QR=35224;RO=967;RPP=454.677;RPPR=2085.49;RUN=1;SAF=110;SAP=4.51363;SAR=98;SRF=491;SRP=3.51555;SRR=476;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:35.8574:10:10:380:0:0:0,-3.0103,-10 0/1:0.05141:4:0:0:4:152:-10,-1.20412,0 0/0:56.9295:17:17:633:0:0:0,-5.11751,-10 0/1:0.429401:7:0:0:7:239:-10,-2.10721,0 0/1:65.7641:6:4:152:2:76:-6.58991,0,-10 0/0:17.7956:4:4:142:0:0:0,-1.20412,-10 0/0:90.0428:28:28:1011:0:0:0,-8.42884,-10 0/0:78.0016:24:24:856:0:0:0,-7.22472,-10 0/1:0.103436:5:0:0:5:190:-10,-1.50515,0 0/0:20.8059:5:5:190:0:0:0,-1.50515,-10 0/0:23.8162:6:6:228:0:0:0,-1.80618,-10 1/1:20.4449:13:0:0:13:447:-10,-3.91339,0 1/1:47.5376:22:0:0:22:801:-10,-6.62266,0 0/0:59.9398:18:18:593:0:0:0,-5.41854,-10 0/1:99:9:3:105:6:198:-10,0,-9.01501 0/0:35.8574:10:10:316:0:0:0,-3.0103,-10 0/0:74.9913:23:23:868:0:0:0,-6.92369,-10 0/0:32.8471:9:9:318:0:0:0,-2.70927,-10 0/0:53.9192:16:16:605:0:0:0,-4.81648,-10 0/0:56.9295:17:17:594:0:0:0,-5.11751,-10 0/1:99:12:4:142:8:297:-10,0,-10 0/0:96.0632:30:30:1086:0:0:0,-9.0309,-10 0/0:20.8059:5:5:190:0:0:0,-1.50515,-10 0/0:65.9604:20:20:753:0:0:0,-6.0206,-10 0/0:81.0119:25:25:899:0:0:0,-7.52575,-10 0/0:38.8677:11:11:402:0:0:0,-3.31133,-10 0/0:44.8883:13:13:465:0:0:0,-3.91339,-10 0/0:20.8059:5:5:177:0:0:0,-1.50515,-10 0/0:47.8986:14:14:528:0:0:0,-4.21442,-10 0/0:53.9192:16:16:585:0:0:0,-4.81648,-10 .:.:.:.:.:.:.:. 0/0:35.8574:10:10:369:0:0:0,-3.0103,-10 0/0:32.8471:9:9:334:0:0:0,-2.70927,-10 0/0:32.8471:9:9:342:0:0:0,-2.70927,-10 0/0:47.8986:14:14:504:0:0:0,-4.21442,-10 0/0:26.8265:7:7:208:0:0:0,-2.10721,-10 0/0:32.8471:9:9:285:0:0:0,-2.70927,-10 0/0:35.8574:10:10:376:0:0:0,-3.0103,-10 0/0:32.8471:9:9:342:0:0:0,-2.70927,-10 0/0:29.8368:8:8:302:0:0:0,-2.40824,-10 0/0:53.9192:16:16:601:0:0:0,-4.81648,-10 0/0:41.878:12:12:421:0:0:0,-3.61236,-10 0/0:35.8574:10:10:365:0:0:0,-3.0103,-10 0/0:81.0119:25:25:900:0:0:0,-7.52575,-10 0/0:38.8677:11:11:417:0:0:0,-3.31133,-10 0/0:35.8574:10:10:374:0:0:0,-3.0103,-10 0/0:99:34:34:1253:0:0:0,-10,-10 0/0:59.9398:18:18:669:0:0:0,-5.41854,-10 0/0:44.8883:13:13:484:0:0:0,-3.91339,-10 0/0:93.053:29:29:1040:0:0:0,-8.72987,-10 0/0:41.878:12:12:427:0:0:0,-3.61236,-10 0/0:81.0119:25:25:944:0:0:0,-7.52575,-10 0/0:38.8677:11:11:418:0:0:0,-3.31133,-10 0/0:8.76474:1:1:38:0:0:0,-0.30103,-3.8 0/0:78.0016:24:24:898:0:0:0,-7.22472,-10 0/0:32.8471:9:9:303:0:0:0,-2.70927,-10 0/0:44.8883:13:13:463:0:0:0,-3.91339,-10 0/0:20.8059:5:5:190:0:0:0,-1.50515,-10 1/1:11.414:10:0:0:10:349:-10,-3.0103,0 0/0:14.7853:3:3:114:0:0:0,-0.90309,-10 0/0:65.9604:20:20:746:0:0:0,-6.0206,-10 0/1:0.0256289:3:0:0:3:91:-8.49333,-0.90309,0 0/1:0.032156:30:2:63:28:1013:-10,-0.407411,0 0/0:29.8368:8:8:271:0:0:0,-2.40824,-10 1/1:23.4552:14:0:0:14:511:-10,-4.21442,0 1/1:26.4655:15:0:0:15:530:-10,-4.51545,0 0/1:99:10:5:188:5:168:-10,0,-10 0/0:41.878:12:12:437:0:0:0,-3.61236,-10 0/1:99:20:9:297:11:371:-10,0,-10 0/0:35.8574:10:10:351:0:0:0,-3.0103,-10 0/0:47.8986:14:14:529:0:0:0,-4.21442,-10 0/0:59.9398:18:18:662:0:0:0,-5.41854,-10 0/0:41.878:12:12:425:0:0:0,-3.61236,-10 0/0:44.8883:13:13:466:0:0:0,-3.91339,-10 0/0:65.9604:20:20:740:0:0:0,-6.0206,-10 0/0:29.8368:8:8:304:0:0:0,-2.40824,-10 1/1:20.4449:13:0:0:13:476:-10,-3.91339,0 0/0:23.8162:6:6:224:0:0:0,-1.80618,-10 0/0:14.7853:3:3:114:0:0:0,-0.90309,-10 0/0:17.7956:4:4:129:0:0:0,-1.20412,-10 0/0:78.0016:24:24:894:0:0:0,-7.22472,-10 0/0:47.8986:14:14:526:0:0:0,-4.21442,-10 0/0:59.9398:18:18:648:0:0:0,-5.41854,-10 0/1:99:16:11:400:5:187:-10,0,-10 0/0:44.8883:13:13:485:0:0:0,-3.91339,-10 0/0:14.7853:3:3:112:0:0:0,-0.90309,-10 0/0:29.8368:8:8:296:0:0:0,-2.40824,-10 0/0:32.8471:9:9:318:0:0:0,-2.70927,-10 0/1:0.0256289:3:0:0:3:114:-10,-0.90309,0 1/1:17.4346:12:0:0:12:456:-10,-3.61236,0 1/1:17.4346:12:0:0:12:430:-10,-3.61236,0 1/1:11.414:10:0:0:10:378:-10,-3.0103,0 scaffold_102 1668462 . G A 2801.27 . AB=0.626506;ABP=14.5479;AC=13;AF=0.0714286;AN=182;AO=109;CIGAR=1X;DP=1183;DPB=1183;DPRA=1.05954;EPP=239.701;EPPR=2326.49;GTI=3;LEN=1;MEANALT=1;MQM=59.844;MQMR=59.9441;NS=91;NUMALT=1;ODDS=1.24579;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3996;QR=39216;RO=1074;RPP=4.62396;RPPR=3.98888;RUN=1;SAF=50;SAP=4.62396;SAR=59;SRF=549;SRP=4.17489;SRR=525;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.920733:11:0:0:11:416:-10,-3.31133,0 0/0:23.4519:4:4:150:0:0:0,-1.20412,-10 1/1:27.4172:17:0:0:17:644:-10,-5.11751,0 0/0:32.4828:7:7:244:0:0:0,-2.10721,-10 0/0:29.4725:6:6:228:0:0:0,-1.80618,-10 0/0:23.4519:4:4:130:0:0:0,-1.20412,-10 0/0:98.7101:29:29:1067:0:0:0,-8.72987,-10 0/0:80.6476:23:23:843:0:0:0,-6.92369,-10 0/0:26.4622:5:5:190:0:0:0,-1.50515,-10 0/0:26.4622:5:5:190:0:0:0,-1.50515,-10 0/0:29.4725:6:6:221:0:0:0,-1.80618,-10 0/0:50.5446:13:13:458:0:0:0,-3.91339,-10 0/0:77.6373:22:22:808:0:0:0,-6.62266,-10 0/0:65.5961:18:18:617:0:0:0,-5.41854,-10 0/0:41.5137:10:10:365:0:0:0,-3.0103,-10 0/0:17.3395:9:8:284:1:16:0,-0.155027,-10 0/0:80.6476:23:23:793:0:0:0,-6.92369,-10 0/0:38.5034:9:9:331:0:0:0,-2.70927,-10 0/0:59.5755:16:16:599:0:0:0,-4.81648,-10 0/0:38.6598:17:16:595:1:16:0,-2.28706,-10 0/0:47.5343:12:12:454:0:0:0,-3.61236,-10 0/0:99:30:30:1124:0:0:0,-9.0309,-10 0/0:26.4622:5:5:185:0:0:0,-1.50515,-10 0/0:74.627:21:21:792:0:0:0,-6.32163,-10 0/0:86.6683:25:25:899:0:0:0,-7.52575,-10 0/0:47.5343:12:12:442:0:0:0,-3.61236,-10 0/0:50.5446:13:13:477:0:0:0,-3.91339,-10 0/0:26.4622:5:5:164:0:0:0,-1.50515,-10 0/0:53.5549:14:14:531:0:0:0,-4.21442,-10 0/0:59.5755:16:16:596:0:0:0,-4.81648,-10 .:.:.:.:.:.:.:. 0/0:41.5137:10:10:373:0:0:0,-3.0103,-10 0/0:35.4931:8:8:300:0:0:0,-2.40824,-10 0/0:38.5034:9:9:333:0:0:0,-2.70927,-10 0/0:53.5549:14:14:510:0:0:0,-4.21442,-10 0/0:32.4828:7:7:219:0:0:0,-2.10721,-10 0/0:38.5034:9:9:313:0:0:0,-2.70927,-10 0/0:41.5137:10:10:380:0:0:0,-3.0103,-10 0/0:41.5137:10:10:368:0:0:0,-3.0103,-10 0/0:35.4931:8:8:304:0:0:0,-2.40824,-10 0/0:62.5858:17:17:607:0:0:0,-5.11751,-10 0/0:47.5343:12:12:420:0:0:0,-3.61236,-10 0/0:41.5137:10:10:378:0:0:0,-3.0103,-10 0/0:89.6786:26:26:981:0:0:0,-7.82678,-10 0/0:44.524:11:11:413:0:0:0,-3.31133,-10 0/0:41.5137:10:10:355:0:0:0,-3.0103,-10 0/0:99:35:35:1290:0:0:0,-10,-10 0/0:65.5961:18:18:641:0:0:0,-5.41854,-10 0/0:50.5446:13:13:493:0:0:0,-3.91339,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/0:47.5343:12:12:433:0:0:0,-3.61236,-10 0/0:86.6683:25:25:946:0:0:0,-7.52575,-10 0/0:44.524:11:11:418:0:0:0,-3.31133,-10 0/0:14.421:1:1:38:0:0:0,-0.30103,-3.8 0/0:83.6578:24:24:847:0:0:0,-7.22472,-10 0/0:38.5034:9:9:338:0:0:0,-2.70927,-10 0/0:50.5446:13:13:480:0:0:0,-3.91339,-10 0/0:26.4622:5:5:167:0:0:0,-1.50515,-10 0/0:41.5137:10:10:380:0:0:0,-3.0103,-10 0/0:20.4416:3:3:114:0:0:0,-0.90309,-10 0/1:99:21:12:456:9:338:-10,0,-10 0/0:20.4416:3:3:107:0:0:0,-0.90309,-9.98667 0/0:99:30:30:1072:0:0:0,-9.0309,-10 0/1:96.6465:8:2:76:6:213:-10,0,-6.25892 0/0:53.5549:14:14:505:0:0:0,-4.21442,-10 0/0:56.5652:15:15:554:0:0:0,-4.51545,-10 0/0:41.5137:10:10:373:0:0:0,-3.0103,-10 0/0:47.5343:12:12:423:0:0:0,-3.61236,-10 0/0:71.6167:20:20:742:0:0:0,-6.0206,-10 0/0:41.5137:10:10:333:0:0:0,-3.0103,-10 0/0:53.5549:14:14:527:0:0:0,-4.21442,-10 0/0:65.5961:18:18:642:0:0:0,-5.41854,-10 0/0:47.5343:12:12:448:0:0:0,-3.61236,-10 0/0:50.5446:13:13:445:0:0:0,-3.91339,-10 0/0:71.6167:20:20:728:0:0:0,-6.0206,-10 0/0:35.4931:8:8:298:0:0:0,-2.40824,-10 0/0:50.5446:13:13:491:0:0:0,-3.91339,-10 0/1:0.0260052:6:0:0:6:204:-10,-1.80618,0 0/1:0.00324214:3:0:0:3:114:-10,-0.90309,0 0/0:23.4519:4:4:130:0:0:0,-1.20412,-10 1/1:48.4893:24:0:0:24:875:-10,-7.22472,0 1/1:18.3863:14:0:0:14:523:-10,-4.21442,0 0/1:99:18:12:431:6:222:-10,0,-10 0/1:99:16:5:177:11:415:-10,0,-10 0/0:50.5446:13:13:480:0:0:0,-3.91339,-10 0/0:20.4416:3:3:92:0:0:0,-0.90309,-8.58667 0/0:35.4931:8:8:277:0:0:0,-2.40824,-10 0/0:38.5034:9:9:333:0:0:0,-2.70927,-10 0/0:20.4416:3:3:108:0:0:0,-0.90309,-10 0/0:47.5343:12:12:451:0:0:0,-3.61236,-10 0/0:47.5343:12:12:431:0:0:0,-3.61236,-10 0/0:41.5137:10:10:380:0:0:0,-3.0103,-10 scaffold_102 1740398 . T A 907.514 . AB=0.507463;ABP=3.04271;AC=2;AF=0.0108696;AN=184;AO=35;CIGAR=1X;DP=2688;DPB=2688;DPRA=1.50769;EPP=4.56135;EPPR=6.47629;GTI=0;LEN=1;MEANALT=1.33333;MQM=60;MQMR=59.9906;NS=92;NUMALT=1;ODDS=10.1777;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1263;QR=96890;RO=2647;RPP=79.0118;RPPR=5750.9;RUN=1;SAF=15;SAP=4.56135;SAR=20;SRF=1291;SRP=6.47629;SRR=1356;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:83.336:19:19:686:0:0:0,-5.71957,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:99:37:37:1391:0:0:0,-10,-10 0/0:83.336:19:19:673:0:0:0,-5.71957,-10 0/0:99:31:31:1147:0:0:0,-9.33193,-10 0/0:86.3463:20:20:747:0:0:0,-6.0206,-10 0/0:99:62:62:2311:0:0:0,-10,-10 0/0:99:43:43:1564:0:0:0,-10,-10 0/0:86.3463:20:20:749:0:0:0,-6.0206,-10 0/0:53.233:9:9:338:0:0:0,-2.70927,-10 0/0:77.3153:18:17:620:0:0:0,-5.11751,-10 0/0:56.2433:10:10:354:0:0:0,-3.0103,-10 0/0:99:59:59:2097:0:0:0,-10,-10 0/0:99:46:46:1692:0:0:0,-10,-10 0/0:99:41:41:1480:0:0:0,-10,-10 0/0:99:53:53:1992:0:0:0,-10,-10 0/0:99:44:44:1540:0:0:0,-10,-10 0/0:44.2021:6:6:225:0:0:0,-1.80618,-10 0/0:98.3813:24:24:882:0:0:0,-7.22472,-10 0/0:99:51:51:1826:0:0:0,-10,-10 0/0:86.3463:20:20:704:0:0:0,-6.0206,-10 0/0:99:54:53:1979:0:0:0,-10,-10 0/0:68.2845:14:14:519:0:0:0,-4.21442,-10 0/0:99:39:39:1445:0:0:0,-10,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:99:28:28:1056:0:0:0,-8.42884,-10 0/0:95.3741:23:23:871:0:0:0,-6.92369,-10 0/0:98.3813:24:24:880:0:0:0,-7.22472,-10 0/0:99:52:52:1939:0:0:0,-10,-10 0/0:77.3153:17:17:634:0:0:0,-5.11751,-10 0/0:44.2021:6:6:204:0:0:0,-1.80618,-10 0/0:95.3741:23:23:842:0:0:0,-6.92369,-10 0/0:86.3463:20:20:731:0:0:0,-6.0206,-10 0/0:92.3653:22:22:786:0:0:0,-6.62266,-10 0/0:65.2742:13:13:437:0:0:0,-3.91339,-10 0/0:53.233:9:9:325:0:0:0,-2.70927,-10 0/0:99:43:43:1560:0:0:0,-10,-10 0/0:99:29:29:1094:0:0:0,-8.72987,-10 0/0:95.3741:23:23:862:0:0:0,-6.92369,-10 0/0:99:41:41:1501:0:0:0,-10,-10 0/0:92.3653:22:22:824:0:0:0,-6.62266,-10 0/0:89.3558:21:21:753:0:0:0,-6.32163,-10 0/0:99:48:48:1770:0:0:0,-10,-10 0/0:80.3256:18:18:621:0:0:0,-5.41854,-10 0/0:92.3653:22:22:783:0:0:0,-6.62266,-10 0/0:99:56:56:2010:0:0:0,-10,-10 0/0:99:34:34:1232:0:0:0,-10,-10 0/0:83.336:19:19:699:0:0:0,-5.71957,-10 0/0:99:36:36:1332:0:0:0,-10,-10 0/0:89.3558:21:21:760:0:0:0,-6.32163,-10 0/0:99:57:57:2073:0:0:0,-10,-10 0/0:65.2742:13:13:490:0:0:0,-3.91339,-10 0/0:44.2021:6:6:213:0:0:0,-1.80618,-10 0/0:99:68:68:2525:0:0:0,-10,-10 0/0:92.3653:22:22:811:0:0:0,-6.62266,-10 0/0:99:32:32:1122:0:0:0,-9.63296,-10 0/0:80.3256:18:18:632:0:0:0,-5.41854,-10 0/0:83.336:19:19:681:0:0:0,-5.71957,-10 0/0:98.3813:24:24:860:0:0:0,-7.22472,-10 0/0:99:56:56:2066:0:0:0,-10,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:99:63:62:2281:1:16:0,-10,-10 0/0:99:28:27:1010:0:0:0,-8.12781,-10 0/0:68.2845:14:14:482:0:0:0,-4.21442,-10 0/0:99:53:52:1936:0:0:0,-10,-10 0/0:99:30:30:1110:0:0:0,-9.0309,-10 0/0:77.3153:17:17:597:0:0:0,-5.11751,-10 0/0:99:42:42:1524:0:0:0,-10,-10 0/0:77.3153:17:17:615:0:0:0,-5.11751,-10 0/0:89.3558:21:21:744:0:0:0,-6.32163,-10 0/0:99:52:51:1879:0:0:0,-10,-10 0/1:99:37:18:674:19:685:-10,0,-10 0/0:86.3463:20:20:736:0:0:0,-6.0206,-10 0/1:99:30:14:527:15:562:-10,0,-10 0/0:99:31:31:1105:0:0:0,-9.33193,-10 0/0:50.2227:8:8:290:0:0:0,-2.40824,-10 0/0:74.3051:16:16:575:0:0:0,-4.81648,-10 0/0:44.2021:6:6:225:0:0:0,-1.80618,-10 0/0:74.3051:16:16:572:0:0:0,-4.81648,-10 0/0:99:40:40:1437:0:0:0,-10,-10 0/0:99:42:42:1559:0:0:0,-10,-10 0/0:99:33:33:1202:0:0:0,-9.93399,-10 0/0:95.3741:23:23:863:0:0:0,-6.92369,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:80.3256:18:18:674:0:0:0,-5.41854,-10 0/0:99:28:28:1046:0:0:0,-8.42884,-10 0/0:92.3653:22:22:826:0:0:0,-6.62266,-10 0/0:71.2948:15:15:544:0:0:0,-4.51545,-10 0/0:99:51:51:1910:0:0:0,-10,-10 0/0:98.3813:24:24:888:0:0:0,-7.22472,-10 0/0:77.3153:17:17:605:0:0:0,-5.11751,-10 scaffold_102 1740442 . A G 326.111 . AB=0.576923;ABP=4.34659;AC=1;AF=0.00543478;AN=184;AO=15;CIGAR=1X;DP=2280;DPB=2280;DPRA=1.04969;EPP=4.31318;EPPR=10.6109;GTI=0;LEN=1;MEANALT=1;MQM=31.8;MQMR=59.6014;NS=92;NUMALT=1;ODDS=9.29723;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=497;QR=82962;RO=2263;RPP=35.5824;RPPR=4385.08;RUN=1;SAF=6;SAP=4.31318;SAR=9;SRF=1167;SRP=7.84742;SRR=1096;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.4398:8:8:301:0:0:0,-2.40824,-10 0/0:70.481:12:12:441:0:0:0,-3.61236,-10 0/0:99:24:24:879:0:0:0,-7.22472,-10 0/0:61.4501:9:9:333:0:0:0,-2.70927,-10 0/0:99:23:23:809:0:0:0,-6.92369,-10 0/0:85.5325:17:17:632:0:0:0,-5.11751,-10 0/0:99:40:40:1441:0:0:0,-10,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:94.5634:20:20:742:0:0:0,-6.0206,-10 0/0:61.4501:9:9:322:0:0:0,-2.70927,-10 0/0:76.5016:14:14:516:0:0:0,-4.21442,-10 0/0:67.4707:11:11:396:0:0:0,-3.31133,-10 0/0:99:43:43:1538:0:0:0,-10,-10 0/0:99:36:36:1319:0:0:0,-10,-10 0/0:99:26:26:972:0:0:0,-7.82678,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:61.4501:9:9:322:0:0:0,-2.70927,-10 0/0:99:40:40:1512:0:0:0,-10,-10 0/0:99:43:43:1536:0:0:0,-10,-10 0/0:99:23:23:865:0:0:0,-6.92369,-10 0/0:99:40:40:1463:0:0:0,-10,-10 0/0:70.481:12:12:456:0:0:0,-3.61236,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 0/0:99:24:24:900:0:0:0,-7.22472,-10 0/0:99:35:35:1308:0:0:0,-10,-10 0/0:91.5531:19:19:717:0:0:0,-5.71957,-10 0/0:85.5325:17:17:612:0:0:0,-5.11751,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:99:44:44:1614:0:0:0,-10,-10 0/0:64.4604:10:10:377:0:0:0,-3.0103,-10 0/0:40.378:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:76.5016:15:14:520:0:0:0,-4.21442,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:61.4501:9:9:340:0:0:0,-2.70927,-10 0/0:55.4295:7:7:240:0:0:0,-2.10721,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:49.4089:5:5:178:0:0:0,-1.50515,-10 0/0:99:22:22:820:0:0:0,-6.62266,-10 0/0:99:28:28:1037:0:0:0,-8.42884,-10 0/0:99:25:25:896:0:0:0,-7.52575,-10 0/0:99:22:22:830:0:0:0,-6.62266,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/1:99:26:11:412:15:497:-10,0,-10 0/0:99:26:26:954:0:0:0,-7.82678,-10 0/0:99:59:59:2141:0:0:0,-10,-10 0/0:99:27:27:986:0:0:0,-8.12781,-10 0/0:99:25:25:933:0:0:0,-7.52575,-10 0/0:99:45:45:1647:0:0:0,-10,-10 0/0:97.5738:21:21:789:0:0:0,-6.32163,-10 0/0:99:42:42:1528:0:0:0,-10,-10 0/0:99:22:22:793:0:0:0,-6.62266,-10 0/0:46.3986:4:4:152:0:0:0,-1.20412,-10 0/0:99:49:49:1804:0:0:0,-10,-10 0/0:82.5222:16:16:593:0:0:0,-4.81648,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:49.4089:5:5:188:0:0:0,-1.50515,-10 0/0:99:22:22:824:0:0:0,-6.62266,-10 0/0:91.5531:19:19:708:0:0:0,-5.71957,-10 0/0:99:53:53:1933:0:0:0,-10,-10 0/0:99:24:24:896:0:0:0,-7.22472,-10 0/0:99:49:48:1777:0:0:0,-10,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:82.5222:16:16:577:0:0:0,-4.81648,-10 0/0:99:42:42:1525:0:0:0,-10,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:64.4604:10:10:357:0:0:0,-3.0103,-10 0/0:99:42:42:1571:0:0:0,-10,-10 0/0:82.5222:16:16:542:0:0:0,-4.81648,-10 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:99:38:38:1401:0:0:0,-10,-10 0/0:99:33:33:1187:0:0:0,-9.93399,-10 0/0:91.5531:19:19:707:0:0:0,-5.71957,-10 0/0:99:29:29:1043:0:0:0,-8.72987,-10 0/0:99:23:23:863:0:0:0,-6.92369,-10 0/0:91.5531:19:19:661:0:0:0,-5.71957,-10 0/0:88.5421:18:18:658:0:0:0,-5.41854,-10 0/0:58.4398:8:8:300:0:0:0,-2.40824,-10 0/0:79.5119:15:15:562:0:0:0,-4.51545,-10 0/0:99:37:37:1333:0:0:0,-10,-10 0/0:99:40:40:1465:0:0:0,-10,-10 0/0:99:35:35:1278:0:0:0,-10,-10 0/0:99:23:23:818:0:0:0,-6.92369,-10 0/0:99:24:24:906:0:0:0,-7.22472,-10 0/0:70.481:12:12:439:0:0:0,-3.61236,-10 0/0:99:24:24:856:0:0:0,-7.22472,-10 0/0:94.5634:20:20:729:0:0:0,-6.0206,-10 0/0:76.5016:14:14:524:0:0:0,-4.21442,-10 0/0:99:31:31:1118:0:0:0,-9.33193,-10 0/0:99:26:26:892:0:0:0,-7.82678,-10 0/0:64.4604:10:10:379:0:0:0,-3.0103,-10 scaffold_102 1953946 . A T 30519.7 . AB=0.508333;ABP=3.15506;AC=96;AF=0.521739;AN=184;AO=1062;CIGAR=1X;DP=2117;DPB=2117;DPRA=0.933941;EPP=5.10407;EPPR=3.02886;GTI=4;LEN=1;MEANALT=1.01852;MQM=59.984;MQMR=59.9924;NS=92;NUMALT=1;ODDS=0.274582;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=38667;QR=38347;RO=1053;RPP=2283.13;RPPR=2263.59;RUN=1;SAF=544;SAP=4.39252;SAR=518;SRF=527;SRP=3.01236;SRR=526;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:57.133:23:0:0:23:840:-10,-6.92369,0 1/1:11.9785:8:0:0:8:303:-10,-2.40824,0 1/1:39.0712:17:0:0:17:629:-10,-5.11751,0 1/1:11.9785:8:0:0:8:252:-10,-2.40824,0 0/1:99:12:4:150:8:285:-10,0,-10 0/0:12.0783:6:6:217:0:0:0,-1.80618,-10 1/1:99:49:1:16:48:1784:-10,-10,0 1/1:72.1845:28:0:0:28:998:-10,-8.42884,0 1/1:14.9888:9:0:0:9:312:-10,-2.70927,0 0/1:0.121594:5:0:0:5:167:-10,-1.50515,0 1/1:17.9991:10:0:0:10:344:-10,-3.0103,0 0/0:12.0783:6:6:206:0:0:0,-1.80618,-10 1/1:66.1639:26:0:0:26:970:-10,-7.82678,0 1/1:56.2748:32:1:16:31:1082:-10,-6.52781,0 1/1:63.1536:25:0:0:25:932:-10,-7.52575,0 0/0:14.1756:23:22:799:1:38:0,-1.76196,-10 1/1:72.1845:29:0:0:28:1030:-10,-8.42884,0 1/1:27.03:13:0:0:13:466:-10,-3.91339,0 0/0:78.3048:28:28:1041:0:0:0,-8.42884,-10 0/1:99:33:14:503:19:700:-10,0,-10 0/1:99:25:16:554:9:327:-10,0,-10 1/1:90.2456:34:0:0:34:1246:-10,-10,0 0/0:42.1813:16:16:602:0:0:0,-4.81648,-10 0/0:78.3048:29:28:1034:0:0:0,-8.42884,-10 0/0:78.3048:28:28:1004:0:0:0,-8.42884,-10 0/0:99:43:43:1570:0:0:0,-10,-10 0/0:45.1916:17:17:640:0:0:0,-5.11751,-10 0/0:78.3048:28:28:1001:0:0:0,-8.42884,-10 0/0:84.3253:30:30:1088:0:0:0,-9.0309,-10 0/0:93.3549:33:33:1219:0:0:0,-9.93399,-10 0/1:0.250694:4:4:141:0:0:0,-1.20412,-10 0/1:0.516749:5:5:185:0:0:0,-1.50515,-10 1/1:63.1536:25:0:0:25:912:-10,-7.52575,0 1/1:24.0197:12:0:0:12:452:-10,-3.61236,0 0/0:48.2019:18:18:682:0:0:0,-5.41854,-10 0/0:24.1195:10:10:374:0:0:0,-3.0103,-10 0/0:48.2019:18:18:679:0:0:0,-5.41854,-10 0/1:99:38:15:509:23:843:-10,0,-10 0/0:22.674:26:25:895:1:38:0,-2.61181,-10 0/0:39.171:15:15:541:0:0:0,-4.51545,-10 0/0:81.3151:29:29:1076:0:0:0,-8.72987,-10 0/0:69.274:25:25:885:0:0:0,-7.52575,-10 0/0:60.2431:22:22:822:0:0:0,-6.62266,-10 0/1:99:39:13:451:26:960:-10,0,-10 0/0:99:38:38:1427:0:0:0,-10,-10 0/0:39.171:15:15:552:0:0:0,-4.51545,-10 0/0:99:57:57:2129:0:0:0,-10,-10 0/0:72.2843:26:26:957:0:0:0,-7.82678,-10 0/0:48.2019:18:18:660:0:0:0,-5.41854,-10 0/0:99:45:45:1623:0:0:0,-10,-10 0/0:36.1607:14:14:504:0:0:0,-4.21442,-10 0/0:99:58:58:2136:0:0:0,-10,-10 0/0:72.2843:26:26:938:0:0:0,-7.82678,-10 0/0:27.1298:11:11:380:0:0:0,-3.31133,-10 0/0:99:47:47:1690:0:0:0,-10,-10 0/1:0.525729:13:12:420:1:16:0,-1.19945,-10 0/0:54.2225:20:20:731:0:0:0,-6.0206,-10 0/0:15.0886:7:7:263:0:0:0,-2.10721,-10 1/1:75.1948:29:0:0:29:1022:-10,-8.72987,0 1/1:30.0403:14:0:0:14:507:-10,-4.21442,0 1/1:87.2356:33:0:0:33:1154:-10,-9.93399,0 1/1:54.1227:22:0:0:22:806:-10,-6.62266,0 1/1:99:56:0:0:56:1987:-10,-10,0 0/1:99:30:15:548:15:532:-10,0,-10 1/1:33.0506:15:0:0:15:558:-10,-4.51545,0 1/1:93.2552:35:0:0:35:1301:-10,-10,0 0/1:99:16:7:244:9:313:-10,0,-10 1/1:27.03:13:0:0:13:491:-10,-3.91339,0 1/1:99:41:0:0:41:1522:-10,-10,0 1/1:17.9991:10:0:0:10:353:-10,-3.0103,0 1/1:63.1536:25:0:0:25:923:-10,-7.52575,0 1/1:87.2356:33:0:0:33:1181:-10,-9.93399,0 0/1:99:29:22:801:7:209:-10,0,-10 0/0:45.1916:17:17:618:0:0:0,-5.11751,-10 0/0:96.3638:34:34:1231:0:0:0,-10,-10 1/1:48.1021:20:0:0:20:758:-10,-6.0206,0 1/1:36.0609:16:0:0:16:598:-10,-4.81648,0 1/1:17.9991:10:0:0:10:355:-10,-3.0103,0 1/1:14.9888:9:0:0:9:342:-10,-2.70927,0 1/1:21.0094:11:0:0:11:410:-10,-3.31133,0 1/1:99:38:0:0:38:1405:-10,-10,0 1/1:60.1433:24:0:0:24:882:-10,-7.22472,0 1/1:57.133:23:0:0:23:836:-10,-6.92369,0 1/1:45.0918:19:0:0:19:719:-10,-5.71957,0 1/1:99:40:0:0:40:1484:-10,-10,0 0/0:12.0783:6:6:206:0:0:0,-1.80618,-10 0/0:63.2534:23:23:847:0:0:0,-6.92369,-10 0/0:39.171:15:15:542:0:0:0,-4.51545,-10 1/1:17.9991:10:0:0:10:355:-10,-3.0103,0 1/1:42.0815:18:0:0:18:662:-10,-5.41854,0 1/1:33.0506:15:0:0:15:548:-10,-4.51545,0 1/1:30.0403:14:0:0:14:528:-10,-4.21442,0 scaffold_102 2438146 . A G 804.101 . AB=0.559322;ABP=4.81373;AC=3;AF=0.0163043;AN=184;AO=33;CIGAR=1X;DP=1501;DPB=1501;DPRA=1.21382;EPP=6.23461;EPPR=22.9416;GTI=0;LEN=1;MEANALT=1;MQM=58.5455;MQMR=59.9209;NS=92;NUMALT=1;ODDS=3.05121;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1191;QR=53806;RO=1466;RPP=74.6689;RPPR=3186.39;RUN=1;SAF=20;SAP=6.23461;SAR=13;SRF=675;SRP=22.9416;SRR=791;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:39.4028:8:8:281:0:0:0,-2.40824,-10 0/0:42.4131:9:9:340:0:0:0,-2.70927,-10 0/0:66.4955:17:17:579:0:0:0,-5.11751,-10 0/0:42.4131:9:9:338:0:0:0,-2.70927,-10 0/0:45.4234:10:10:371:0:0:0,-3.0103,-10 0/1:13.5914:10:9:332:1:37:-1.6897,0,-10 0/0:96.597:27:27:1013:0:0:0,-8.12781,-10 0/0:72.5161:19:19:658:0:0:0,-5.71957,-10 0/0:72.5161:19:19:692:0:0:0,-5.71957,-10 0/0:27.3616:4:4:148:0:0:0,-1.20412,-10 0/0:36.3925:7:7:240:0:0:0,-2.10721,-10 0/0:36.3925:7:7:254:0:0:0,-2.10721,-10 0/0:81.5469:22:22:763:0:0:0,-6.62266,-10 0/0:99:34:34:1266:0:0:0,-10,-10 0/0:99:29:29:1089:0:0:0,-8.72987,-10 0/0:84.5572:23:23:866:0:0:0,-6.92369,-10 0/0:87.5674:24:24:851:0:0:0,-7.22472,-10 0/0:36.3925:7:7:266:0:0:0,-2.10721,-10 0/0:72.5161:20:19:707:0:0:0,-5.71957,-10 0/0:99:40:40:1443:0:0:0,-10,-10 0/0:60.4749:15:15:532:0:0:0,-4.51545,-10 0/0:81.5469:22:22:830:0:0:0,-6.62266,-10 0/0:39.4028:8:8:302:0:0:0,-2.40824,-10 0/0:72.5161:19:19:662:0:0:0,-5.71957,-10 0/0:51.444:12:12:445:0:0:0,-3.61236,-10 0/0:51.444:12:12:427:0:0:0,-3.61236,-10 0/0:33.3822:6:6:212:0:0:0,-1.80618,-10 0/0:63.4852:16:16:606:0:0:0,-4.81648,-10 0/0:60.4749:15:15:557:0:0:0,-4.51545,-10 0/0:72.5161:19:19:712:0:0:0,-5.71957,-10 0/0:21.341:2:2:76:0:0:0,-0.60206,-7.22 0/0:21.341:2:2:76:0:0:0,-0.60206,-7.22 0/0:57.4646:14:14:526:0:0:0,-4.21442,-10 0/0:39.4028:8:8:282:0:0:0,-2.40824,-10 0/0:45.4234:10:10:366:0:0:0,-3.0103,-10 0/0:30.3719:5:5:186:0:0:0,-1.50515,-10 0/0:57.4646:14:14:501:0:0:0,-4.21442,-10 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:66.4955:17:17:614:0:0:0,-5.11751,-10 0/0:54.4543:13:13:482:0:0:0,-3.91339,-10 0/0:87.5674:24:24:904:0:0:0,-7.22472,-10 0/0:33.3822:6:6:224:0:0:0,-1.80618,-10 0/0:45.4234:10:10:369:0:0:0,-3.0103,-10 0/0:93.5852:26:26:975:0:0:0,-7.82678,-10 0/0:57.4646:14:14:522:0:0:0,-4.21442,-10 0/0:48.4337:11:11:409:0:0:0,-3.31133,-10 0/0:99:31:31:1168:0:0:0,-9.33193,-10 0/0:90.5764:25:25:942:0:0:0,-7.52575,-10 0/0:63.4852:16:16:600:0:0:0,-4.81648,-10 0/0:99:37:37:1362:0:0:0,-10,-10 0/0:57.4646:14:14:509:0:0:0,-4.21442,-10 0/0:87.5674:24:24:846:0:0:0,-7.22472,-10 0/0:63.4852:16:16:603:0:0:0,-4.81648,-10 0/0:27.3616:4:4:152:0:0:0,-1.20412,-10 0/0:99:33:32:1210:0:0:0,-9.63296,-10 0/0:57.4646:14:14:523:0:0:0,-4.21442,-10 0/0:81.5469:22:22:821:0:0:0,-6.62266,-10 0/0:27.3616:4:4:138:0:0:0,-1.20412,-10 0/0:24.3513:3:3:114:0:0:0,-0.90309,-10 0/0:60.4749:15:15:545:0:0:0,-4.51545,-10 0/0:84.5572:23:23:838:0:0:0,-6.92369,-10 0/0:57.4646:14:14:513:0:0:0,-4.21442,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:63.4852:16:16:599:0:0:0,-4.81648,-10 0/0:66.4955:17:17:619:0:0:0,-5.11751,-10 0/0:96.597:27:27:963:0:0:0,-8.12781,-10 0/0:57.4646:14:14:505:0:0:0,-4.21442,-10 0/0:39.4028:8:8:302:0:0:0,-2.40824,-10 0/0:96.597:27:27:981:0:0:0,-8.12781,-10 0/0:42.4131:9:9:335:0:0:0,-2.70927,-10 0/0:75.5264:20:20:751:0:0:0,-6.0206,-10 0/1:99:27:11:388:16:557:-10,0,-10 0/1:99:22:6:180:16:597:-10,0,-10 0/0:57.4646:14:14:518:0:0:0,-4.21442,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:63.4852:16:16:606:0:0:0,-4.81648,-10 0/0:60.4749:15:15:527:0:0:0,-4.51545,-10 0/0:48.4337:11:11:379:0:0:0,-3.31133,-10 0/0:27.3616:4:4:151:0:0:0,-1.20412,-10 0/0:42.4131:9:9:339:0:0:0,-2.70927,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:90.5764:25:25:906:0:0:0,-7.52575,-10 0/0:60.4749:15:15:563:0:0:0,-4.51545,-10 0/0:81.5469:22:22:776:0:0:0,-6.62266,-10 0/0:87.5674:24:24:901:0:0:0,-7.22472,-10 0/0:27.3616:4:4:152:0:0:0,-1.20412,-10 0/0:54.4543:13:13:488:0:0:0,-3.91339,-10 0/0:36.3925:7:7:266:0:0:0,-2.10721,-10 0/0:33.3822:6:6:225:0:0:0,-1.80618,-10 0/0:75.5264:20:20:756:0:0:0,-6.0206,-10 0/0:54.4543:13:13:449:0:0:0,-3.91339,-10 0/0:60.4749:15:15:524:0:0:0,-4.51545,-10 scaffold_102 2582273 . CTG C 12453.8 . AB=0.522936;ABP=4.00639;AC=51;AF=0.277174;AN=184;AO=481;CIGAR=1M2D1M;DP=1684;DPB=1462.5;DPRA=1.08816;EPP=3.12316;EPPR=5.77879;GTI=2;LEN=2;MEANALT=1.03333;MQM=59.9584;MQMR=60;NS=92;NUMALT=1;ODDS=0.0318771;PAIRED=0;PAIREDR=0;PAO=2;PQA=63.5;PQR=899.5;PRO=26;QA=16473;QR=43620;RO=1193;RPP=1047.49;RPPR=2593.58;RUN=1;SAF=238;SAP=3.12316;SAR=243;SRF=616;SRP=5.77879;SRR=577;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:17.5565:6:6:225:0:0:0,-1.80618,-10 1|1:17.9538:11:0:0:11:380:-10,-3.31133,0 1|1:54.0774:23:0:0:23:819:-10,-6.92369,0 0|0:38.6286:13:13:480:0:0:0,-3.91339,-10 0|0:35.6183:12:12:438:0:0:0,-3.61236,-10 0|0:29.5977:10:10:380:0:0:0,-3.0103,-10 0|0:99:51:49:1806:0:0:0,-10,-10 1|1:29.995:15:0:0:15:470:-10,-4.51545,0 1|1:17.9538:11:0:0:11:374:-10,-3.31133,0 0|1:0.358101:3:3:112:0:0:0,-0.90309,-10 0|0:14.5462:5:5:182:0:0:0,-1.50515,-10 0|1:0.17427:7:0:0:7:251:-10,-2.10721,0 1|1:75.1494:30:0:0:30:1076:-10,-9.0309,0 0|1:99:39:20:754:19:680:-10,0,-10 1|1:54.0774:24:0:0:23:823:-10,-6.92369,0 0|0:59.7007:20:20:748:0:0:0,-6.0206,-10 0|0:68.7316:23:23:826:0:0:0,-6.92369,-10 0|0:44.6492:15:15:566:0:0:0,-4.51545,-10 0|0:68.7316:23:23:829:0:0:0,-6.92369,-10 0|0:99:36:34:1226:0:0:0,-10,-10 0|1:99:16:9:338:7:221:-10,0,-10 0|0:71.7419:24:24:876:0:0:0,-7.22472,-10 0|0:11.5359:4:4:148:0:0:0,-1.20412,-10 0|0:23.5771:8:8:289:0:0:0,-2.40824,-10 0|0:47.6595:16:16:582:0:0:0,-4.81648,-10 0|0:92.8141:31:31:1149:0:0:0,-9.33193,-10 0|0:68.7316:23:23:854:0:0:0,-6.92369,-10 0|0:35.6183:13:12:435:0:0:0,-3.61236,-10 0|0:38.6286:13:13:479:0:0:0,-3.91339,-10 0|0:99:34:34:1221:0:0:0,-10,-10 0|0:11.5359:4:4:146:0:0:0,-1.20412,-10 0|0:14.5462:5:5:187:0:0:0,-1.50515,-10 0|0:59.7007:20:20:754:0:0:0,-6.0206,-10 1|1:8.92287:8:0:0:8:300:-10,-2.40824,0 0|0:62.711:22:21:780:0:0:0,-6.32163,-10 0|0:14.5462:6:5:189:0:0:0,-1.50515,-10 0|0:53.6801:18:18:661:0:0:0,-5.41854,-10 0|0:77.7624:26:26:920:0:0:0,-7.82678,-10 0|0:35.6183:13:12:424:0:0:0,-3.61236,-10 0|0:56.6904:19:19:680:0:0:0,-5.71957,-10 0|0:62.711:21:21:749:0:0:0,-6.32163,-10 0|0:89.8028:30:30:1098:0:0:0,-9.0309,-10 0|0:56.6904:19:19:702:0:0:0,-5.71957,-10 0|0:95.8208:32:32:1186:0:0:0,-9.63296,-10 0|0:38.6286:13:13:458:0:0:0,-3.91339,-10 0|0:50.6698:17:17:619:0:0:0,-5.11751,-10 0|0:99:38:38:1374:0:0:0,-10,-10 0|0:56.6904:20:19:712:0:0:0,-5.71957,-10 0|0:44.6492:15:15:563:0:0:0,-4.51545,-10 0|0:99:40:40:1472:0:0:0,-10,-10 0|0:38.6286:13:13:481:0:0:0,-3.91339,-10 0|0:77.7624:26:26:966:0:0:0,-7.82678,-10 0|0:59.7007:20:20:736:0:0:0,-6.0206,-10 0|0:11.5359:4:4:151:0:0:0,-1.20412,-10 0|0:68.7316:23:23:847:0:0:0,-6.92369,-10 0|0:35.6183:12:12:450:0:0:0,-3.61236,-10 0|0:59.7007:20:20:730:0:0:0,-6.0206,-10 0|0:14.5462:5:5:185:0:0:0,-1.50515,-10 1|1:20.9641:12:0:0:12:362:-10,-3.61236,0 1|1:14.9435:10:0:0:10:338:-10,-3.0103,0 0|0:77.7624:26:26:932:0:0:0,-7.82678,-10 1|1:42.0362:19:0:0:19:695:-10,-5.71957,0 0|1:99:33:17:627:16:526:-10,0,-10 0|0:23.5771:8:8:279:0:0:0,-2.40824,-10 1|1:8.92287:8:0:0:8:273:-10,-2.40824,0 0|1:99:30:16:590:14:468:-10,0,-10 1|1:36.0156:17:0:0:17:593:-10,-5.11751,0 0|0:32.608:11:11:401:0:0:0,-3.31133,-10 0|1:99:25:16:585:9:296:-10,0,-10 0|0:29.5977:10:10:348:0:0:0,-3.0103,-10 1|1:39.0259:18:0:0:18:571:-10,-5.41854,0 1|1:90.2:35:0:0:35:1158:-10,-10,0 1|1:57.0877:24:0:0:24:809:-10,-7.22472,0 1|1:39.0259:18:0:0:18:632:-10,-5.41854,0 1|1:60.098:25:0:0:25:859:-10,-7.52575,0 0|0:32.608:11:11:411:0:0:0,-3.31133,-10 1|1:36.0156:17:0:0:17:596:-10,-5.11751,0 0|0:59.7007:20:20:691:0:0:0,-6.0206,-10 0|0:17.5565:6:6:221:0:0:0,-1.80618,-10 0|0:29.5977:10:10:378:0:0:0,-3.0103,-10 0|0:99:41:41:1517:0:0:0,-10,-10 0|1:99:22:7:258:15:524:-10,0,-10 0|1:99:18:9:320:9:315:-10,0,-10 1|1:48.0568:21:0:0:21:727:-10,-6.32163,0 0|0:65.7213:22:22:800:0:0:0,-6.62266,-10 0|0:17.5565:6:6:219:0:0:0,-1.80618,-10 1|1:51.0671:22:0:0:22:704:-10,-6.62266,0 0|0:41.6389:14:14:494:0:0:0,-4.21442,-10 0|1:99:11:5:165:6:215:-10,0,-10 0|1:99:17:5:178:12:418:-10,0,-10 0|0:35.6183:12:12:427:0:0:0,-3.61236,-10 0|0:50.6698:17:17:616:0:0:0,-5.11751,-10 scaffold_102 2736813 . G A 1474.48 . AB=0.678161;ABP=26.9963;AC=4;AF=0.0217391;AN=184;AO=59;CIGAR=1X;DP=2445;DPB=2445;DPRA=0.811705;EPP=3.0471;EPPR=3.83007;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9035;NS=92;NUMALT=1;ODDS=1.531;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2123;QR=86936;RO=2384;RPP=131.127;RPPR=5179.8;RUN=1;SAF=29;SAP=3.0471;SAR=30;SRF=1177;SRP=3.83007;SRR=1207;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:84.6638:21:21:790:0:0:0,-6.32163,-10 0/0:54.5609:11:11:385:0:0:0,-3.31133,-10 0/0:81.6536:20:20:746:0:0:0,-6.0206,-10 0/0:81.6536:20:20:731:0:0:0,-6.0206,-10 0/0:78.6433:19:19:679:0:0:0,-5.71957,-10 0/0:54.5609:11:11:415:0:0:0,-3.31133,-10 0/0:99:61:61:2235:0:0:0,-10,-10 0/0:99:41:41:1529:0:0:0,-10,-10 0/0:69.6124:16:16:580:0:0:0,-4.81648,-10 0/0:27.4682:2:2:76:0:0:0,-0.60206,-7.22 0/0:54.5609:11:11:418:0:0:0,-3.31133,-10 0/0:57.5712:12:12:440:0:0:0,-3.61236,-10 0/0:99:31:30:1062:0:0:0,-9.0309,-10 0/0:99:36:36:1292:0:0:0,-10,-10 0/0:99:38:38:1378:0:0:0,-10,-10 0/0:99:42:42:1516:0:0:0,-10,-10 0/0:99:40:40:1488:0:0:0,-10,-10 0/0:72.6227:17:17:635:0:0:0,-5.11751,-10 0/0:93.6937:24:24:902:0:0:0,-7.22472,-10 0/0:99:46:46:1685:0:0:0,-10,-10 0/0:69.6124:16:16:597:0:0:0,-4.81648,-10 0/0:99:29:29:1081:0:0:0,-8.72987,-10 0/0:57.5712:12:12:454:0:0:0,-3.61236,-10 0/0:90.684:23:23:858:0:0:0,-6.92369,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:90.684:23:23:826:0:0:0,-6.92369,-10 0/0:66.6021:15:15:569:0:0:0,-4.51545,-10 0/0:84.6638:21:21:743:0:0:0,-6.32163,-10 0/0:99:41:41:1501:0:0:0,-10,-10 0/0:45.53:8:8:291:0:0:0,-2.40824,-10 0/0:54.5609:11:11:388:0:0:0,-3.31133,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:60.5815:13:13:487:0:0:0,-3.91339,-10 0/0:93.6937:24:24:881:0:0:0,-7.22472,-10 0/0:63.5918:14:14:496:0:0:0,-4.21442,-10 0/0:60.5815:13:13:466:0:0:0,-3.91339,-10 0/0:99:38:38:1382:0:0:0,-10,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:75.633:18:18:622:0:0:0,-5.41854,-10 0/0:99:41:41:1483:0:0:0,-10,-10 0/0:84.6638:21:21:785:0:0:0,-6.32163,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:99:35:35:1283:0:0:0,-10,-10 0/0:72.6227:17:17:622:0:0:0,-5.11751,-10 0/0:78.6433:19:19:684:0:0:0,-5.71957,-10 0/0:99:50:50:1755:0:0:0,-10,-10 0/0:99:39:39:1427:0:0:0,-10,-10 0/0:81.6536:20:20:724:0:0:0,-6.0206,-10 0/0:99:53:53:1912:0:0:0,-10,-10 0/0:75.633:18:18:670:0:0:0,-5.41854,-10 0/0:99:49:49:1708:0:0:0,-10,-10 0/0:81.6536:20:20:697:0:0:0,-6.0206,-10 0/0:63.5918:14:14:491:0:0:0,-4.21442,-10 0/0:99:44:44:1595:0:0:0,-10,-10 0/0:69.6124:16:16:607:0:0:0,-4.81648,-10 0/0:99:29:29:1068:0:0:0,-8.72987,-10 0/0:48.5403:9:9:265:0:0:0,-2.70927,-10 0/1:0.369052:17:0:0:17:631:-10,-5.11751,0 0/1:0.772403:18:0:0:18:651:-10,-5.41854,0 0/0:99:54:54:1984:0:0:0,-10,-10 0/0:99:31:31:1108:0:0:0,-9.33193,-10 0/0:99:46:46:1696:0:0:0,-10,-10 0/0:99:29:29:1049:0:0:0,-8.72987,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:99:48:48:1781:0:0:0,-10,-10 0/1:99:28:12:446:16:547:-10,0,-10 0/0:75.633:18:18:673:0:0:0,-5.41854,-10 0/0:99:60:59:2188:0:0:0,-10,-10 0/0:60.5815:13:13:489:0:0:0,-3.91339,-10 0/0:99:27:27:1007:0:0:0,-8.12781,-10 0/0:99:42:42:1526:0:0:0,-10,-10 0/0:99:33:33:1177:0:0:0,-9.93399,-10 0/0:99:32:32:1142:0:0:0,-9.63296,-10 0/0:99:43:43:1537:0:0:0,-10,-10 0/0:66.6021:15:15:560:0:0:0,-4.51545,-10 0/0:54.5609:11:11:417:0:0:0,-3.31133,-10 0/0:69.6124:16:16:577:0:0:0,-4.81648,-10 0/0:33.4888:4:4:128:0:0:0,-1.20412,-10 0/0:84.6638:21:21:769:0:0:0,-6.32163,-10 0/0:99:51:51:1848:0:0:0,-10,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:99:27:27:955:0:0:0,-8.12781,-10 0/1:99:24:16:596:8:294:-10,0,-10 0/0:99:37:37:1389:0:0:0,-10,-10 0/0:42.5197:7:7:242:0:0:0,-2.10721,-10 0/0:96.7029:25:25:923:0:0:0,-7.52575,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/0:45.53:8:8:303:0:0:0,-2.40824,-10 0/0:93.6937:24:24:867:0:0:0,-7.22472,-10 0/0:99:41:41:1553:0:0:0,-10,-10 0/0:99:26:26:907:0:0:0,-7.82678,-10 scaffold_102 2736816 . G A 1978.14 . AB=0.653061;ABP=12.9813;AC=5;AF=0.0271739;AN=184;AO=78;CIGAR=1X;DP=2445;DPB=2445;DPRA=1.08506;EPP=3.12166;EPPR=3.89266;GTI=2;LEN=1;MEANALT=1;MQM=59.4744;MQMR=59.9226;NS=92;NUMALT=1;ODDS=5.3689;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2798;QR=85556;RO=2365;RPP=172.385;RPPR=5138.54;RUN=1;SAF=40;SAP=3.12166;SAR=38;SRF=1167;SRP=3.89266;SRR=1198;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.6664:21:21:768:0:0:0,-6.32163,-10 0/0:48.5634:11:11:368:0:0:0,-3.31133,-10 0/0:75.6561:20:20:730:0:0:0,-6.0206,-10 0/0:75.6561:20:20:674:0:0:0,-6.0206,-10 0/0:72.6458:19:19:689:0:0:0,-5.71957,-10 0/0:48.5634:11:11:400:0:0:0,-3.31133,-10 0/0:99:61:60:2236:0:0:0,-10,-10 0/0:90.899:41:40:1482:1:34:0,-7.32945,-10 0/0:63.6149:16:16:546:0:0:0,-4.81648,-10 0/1:3.92445e-05:2:0:0:2:76:-7.22,-0.60206,0 0/1:0.0201397:11:0:0:11:413:-10,-3.31133,0 0/0:51.5737:12:12:435:0:0:0,-3.61236,-10 0/0:99:31:31:1052:0:0:0,-9.33193,-10 0/1:99:36:17:615:19:688:-10,0,-10 0/0:99:38:38:1392:0:0:0,-10,-10 1/1:80.6248:42:0:0:42:1539:-10,-10,0 0/0:99:40:40:1475:0:0:0,-10,-10 0/0:66.6252:17:17:598:0:0:0,-5.11751,-10 0/0:87.6973:24:24:876:0:0:0,-7.22472,-10 0/0:99:46:46:1644:0:0:0,-10,-10 0/0:63.6149:16:16:579:0:0:0,-4.81648,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:51.5737:12:12:451:0:0:0,-3.61236,-10 0/0:84.6868:23:23:860:0:0:0,-6.92369,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:99:35:35:1253:0:0:0,-10,-10 0/0:84.6868:23:23:782:0:0:0,-6.92369,-10 0/0:60.6046:15:15:562:0:0:0,-4.51545,-10 0/0:78.6664:21:21:745:0:0:0,-6.32163,-10 0/0:99:41:41:1509:0:0:0,-10,-10 0/0:39.5325:8:8:299:0:0:0,-2.40824,-10 0/0:48.5634:11:11:415:0:0:0,-3.31133,-10 0/0:93.7157:26:26:973:0:0:0,-7.82678,-10 0/0:54.584:13:13:428:0:0:0,-3.91339,-10 0/0:60.0496:24:23:858:1:16:0,-4.24451,-10 0/0:57.5943:14:14:509:0:0:0,-4.21442,-10 0/0:54.584:13:13:453:0:0:0,-3.91339,-10 0/0:99:38:38:1412:0:0:0,-10,-10 0/0:96.7237:27:27:974:0:0:0,-8.12781,-10 0/0:69.6355:18:18:621:0:0:0,-5.41854,-10 0/0:99:41:41:1470:0:0:0,-10,-10 0/0:78.6664:21:21:763:0:0:0,-6.32163,-10 0/0:99:28:28:1018:0:0:0,-8.42884,-10 0/0:99:35:35:1279:0:0:0,-10,-10 0/0:66.6252:17:17:631:0:0:0,-5.11751,-10 0/0:72.6458:19:19:673:0:0:0,-5.71957,-10 0/0:99:50:50:1727:0:0:0,-10,-10 0/0:99:39:39:1394:0:0:0,-10,-10 0/0:75.6561:20:20:718:0:0:0,-6.0206,-10 0/0:99:53:53:1921:0:0:0,-10,-10 0/0:69.6355:18:18:675:0:0:0,-5.41854,-10 0/0:99:49:49:1786:0:0:0,-10,-10 0/0:75.6561:20:20:723:0:0:0,-6.0206,-10 0/0:57.5943:14:14:521:0:0:0,-4.21442,-10 0/0:99:44:44:1611:0:0:0,-10,-10 0/0:63.6149:16:16:559:0:0:0,-4.81648,-10 0/0:99:29:29:1046:0:0:0,-8.72987,-10 0/0:42.5428:9:9:301:0:0:0,-2.70927,-10 0/0:66.6252:17:17:611:0:0:0,-5.11751,-10 0/0:69.6355:18:18:673:0:0:0,-5.41854,-10 0/0:99:54:54:1966:0:0:0,-10,-10 0/0:80.0102:31:30:1079:1:16:0,-6.24057,-10 0/0:99:46:46:1667:0:0:0,-10,-10 0/0:99:29:29:1016:0:0:0,-8.72987,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:99:48:48:1762:0:0:0,-10,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:69.6355:18:18:635:0:0:0,-5.41854,-10 0/0:99:60:60:2175:0:0:0,-10,-10 0/0:54.584:13:13:478:0:0:0,-3.91339,-10 0/0:96.7237:27:27:969:0:0:0,-8.12781,-10 0/0:99:42:41:1459:1:16:0,-9.42001,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:99:43:43:1525:0:0:0,-10,-10 0/0:60.6046:15:15:570:0:0:0,-4.51545,-10 0/0:48.5634:11:11:412:0:0:0,-3.31133,-10 0/0:63.6149:16:16:563:0:0:0,-4.81648,-10 0/0:27.4913:4:4:145:0:0:0,-1.20412,-10 0/0:78.6664:21:21:773:0:0:0,-6.32163,-10 0/0:99:51:50:1744:0:0:0,-10,-10 0/0:96.7237:27:27:965:0:0:0,-8.12781,-10 0/0:96.7237:27:27:965:0:0:0,-8.12781,-10 0/0:87.6973:24:24:904:0:0:0,-7.22472,-10 0/0:99:37:37:1395:0:0:0,-10,-10 0/0:36.5222:7:7:233:0:0:0,-2.10721,-10 0/0:90.7077:25:25:897:0:0:0,-7.52575,-10 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/0:39.5325:8:8:291:0:0:0,-2.40824,-10 0/0:87.6973:24:24:863:0:0:0,-7.22472,-10 0/0:99:41:41:1499:0:0:0,-10,-10 0/0:93.7157:26:26:932:0:0:0,-7.82678,-10 scaffold_102 2774164 . C T 236.242 . AB=0.666667;ABP=7.35324;AC=2;AF=0.0108696;AN=184;AO=14;CIGAR=1X;DP=1372;DPB=1372;DPRA=1.07645;EPP=5.49198;EPPR=3.24056;GTI=1;LEN=1;MEANALT=1;MQM=58.5714;MQMR=59.9993;NS=92;NUMALT=1;ODDS=9.22342;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=483;QR=50014;RO=1358;RPP=33.4109;RPPR=2865.65;RUN=1;SAF=9;SAP=5.49198;SAR=5;SRF=663;SRP=4.6477;SRR=695;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.1608:12:12:428:0:0:0,-3.61236,-10 0/0:61.1299:9:9:320:0:0:0,-2.70927,-10 0/0:94.2426:20:20:732:0:0:0,-6.0206,-10 0/0:55.1093:7:7:265:0:0:0,-2.10721,-10 0/0:61.1299:9:9:338:0:0:0,-2.70927,-10 0/0:70.1608:12:12:446:0:0:0,-3.61236,-10 0/0:99:23:23:872:0:0:0,-6.92369,-10 0/0:97.2522:21:21:770:0:0:0,-6.32163,-10 0/0:55.1093:7:7:252:0:0:0,-2.10721,-10 0/0:46.0784:4:4:152:0:0:0,-1.20412,-10 0/0:52.099:6:6:226:0:0:0,-1.80618,-10 0/0:58.1196:8:8:294:0:0:0,-2.40824,-10 0/0:81.7752:25:24:876:1:16:0,-4.52781,-10 0/0:94.2426:20:20:728:0:0:0,-6.0206,-10 0/0:73.1711:13:13:488:0:0:0,-3.91339,-10 0/0:99:26:26:934:0:0:0,-7.82678,-10 0/0:99:27:27:988:0:0:0,-8.12781,-10 0/0:73.1711:13:13:481:0:0:0,-3.91339,-10 0/0:48.4912:21:20:756:1:38:0,-1.19941,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:85.2123:17:17:599:0:0:0,-5.11751,-10 0/0:99:22:22:827:0:0:0,-6.62266,-10 0/0:67.1505:11:11:418:0:0:0,-3.31133,-10 0/0:94.2426:20:20:741:0:0:0,-6.0206,-10 0/0:82.202:16:16:602:0:0:0,-4.81648,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:64.1402:10:10:371:0:0:0,-3.0103,-10 0/0:55.1093:7:7:252:0:0:0,-2.10721,-10 0/0:97.2522:21:21:744:0:0:0,-6.32163,-10 0/0:94.2426:20:20:665:0:0:0,-6.0206,-10 0/0:58.1196:8:8:284:0:0:0,-2.40824,-10 0/0:58.1196:8:8:304:0:0:0,-2.40824,-10 0/0:58.1196:8:8:304:0:0:0,-2.40824,-10 0/1:1.99833e-06:7:0:0:7:263:-10,-2.10721,0 0/0:88.2225:18:18:645:0:0:0,-5.41854,-10 0/0:64.1402:10:10:367:0:0:0,-3.0103,-10 0/0:70.1608:12:12:449:0:0:0,-3.61236,-10 0/0:91.2326:19:19:696:0:0:0,-5.71957,-10 0/0:64.1402:10:10:378:0:0:0,-3.0103,-10 0/0:64.1402:10:10:374:0:0:0,-3.0103,-10 0/0:91.2326:19:19:675:0:0:0,-5.71957,-10 0/0:79.1917:15:15:544:0:0:0,-4.51545,-10 0/0:61.1299:9:9:311:0:0:0,-2.70927,-10 0/0:99:24:24:891:0:0:0,-7.22472,-10 0/0:82.202:16:16:597:0:0:0,-4.81648,-10 0/0:76.1814:14:14:526:0:0:0,-4.21442,-10 0/0:99:30:30:1133:0:0:0,-9.0309,-10 0/0:82.202:16:16:582:0:0:0,-4.81648,-10 0/0:52.099:6:6:228:0:0:0,-1.80618,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:67.1505:11:11:418:0:0:0,-3.31133,-10 0/0:99:23:23:852:0:0:0,-6.92369,-10 0/0:52.099:6:6:228:0:0:0,-1.80618,-10 0/0:40.0578:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:64.1402:10:10:380:0:0:0,-3.0103,-10 0/0:99:22:22:817:0:0:0,-6.62266,-10 0/0:58.1196:8:8:304:0:0:0,-2.40824,-10 0/0:70.1608:12:12:448:0:0:0,-3.61236,-10 0/0:55.1093:7:7:266:0:0:0,-2.10721,-10 0/0:99:24:24:899:0:0:0,-7.22472,-10 0/0:85.2123:17:17:603:0:0:0,-5.11751,-10 0/0:99:34:34:1269:0:0:0,-10,-10 0/0:73.1711:13:13:491:0:0:0,-3.91339,-10 0/0:58.1196:8:8:303:0:0:0,-2.40824,-10 0/0:94.2426:20:20:745:0:0:0,-6.0206,-10 0/0:82.202:16:16:578:0:0:0,-4.81648,-10 0/0:61.1299:9:9:304:0:0:0,-2.70927,-10 0/0:99:25:25:900:0:0:0,-7.52575,-10 0/0:52.099:6:6:228:0:0:0,-1.80618,-10 0/0:61.1299:9:9:340:0:0:0,-2.70927,-10 0/0:82.202:16:16:596:0:0:0,-4.81648,-10 0/0:79.1917:15:15:549:0:0:0,-4.51545,-10 0/0:76.1814:14:14:520:0:0:0,-4.21442,-10 0/0:85.2123:17:17:642:0:0:0,-5.11751,-10 0/0:79.1917:15:15:559:0:0:0,-4.51545,-10 0/0:79.1917:15:15:555:0:0:0,-4.51545,-10 0/0:79.1917:15:15:546:0:0:0,-4.51545,-10 0/0:52.099:6:6:227:0:0:0,-1.80618,-10 0/0:46.0784:4:4:151:0:0:0,-1.20412,-10 0/0:99:26:26:953:0:0:0,-7.82678,-10 0/0:99:30:30:1057:0:0:0,-9.0309,-10 0/1:99:11:6:217:5:166:-10,0,-10 0/0:79.1917:15:15:534:0:0:0,-4.51545,-10 0/0:64.1402:10:10:372:0:0:0,-3.0103,-10 0/0:58.1196:8:8:301:0:0:0,-2.40824,-10 0/0:76.1814:14:14:528:0:0:0,-4.21442,-10 0/0:82.202:16:16:600:0:0:0,-4.81648,-10 0/0:49.0887:5:5:190:0:0:0,-1.50515,-10 0/0:76.1814:14:14:507:0:0:0,-4.21442,-10 0/0:76.1814:14:14:520:0:0:0,-4.21442,-10 0/0:88.2225:18:18:637:0:0:0,-5.41854,-10 scaffold_120 521974 . C T 7866.74 . AB=0.553763;ABP=7.68013;AC=33;AF=0.179348;AN=184;AO=291;CIGAR=1X;DP=1428;DPB=1428;DPRA=1.12717;EPP=3.07746;EPPR=5.2239;GTI=3;LEN=1;MEANALT=1.08696;MQM=60;MQMR=59.9647;NS=92;NUMALT=1;ODDS=0.260175;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10611;QR=41190;RO=1134;RPP=634.909;RPPR=2465.46;RUN=1;SAF=147;SAP=3.07746;SAR=144;SRF=550;SRP=5.2239;SRR=584;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:12.6143:22:1:28:21:775:-10,-2.48024,0 0/0:35.6862:11:11:387:0:0:0,-3.31133,-10 1/1:36.4003:18:0:0:17:627:-10,-5.11751,0 1/1:27.3694:14:0:0:14:505:-10,-4.21442,0 0/0:32.6759:10:10:379:0:0:0,-3.0103,-10 0/0:35.6862:11:11:385:0:0:0,-3.31133,-10 0/0:99:33:33:1193:0:0:0,-9.93399,-10 0/0:59.7686:19:19:676:0:0:0,-5.71957,-10 0/0:68.7995:22:22:825:0:0:0,-6.62266,-10 0/0:20.6347:6:6:225:0:0:0,-1.80618,-10 0/0:8.59351:2:2:74:0:0:0,-0.60206,-7.03 0/0:20.6347:6:6:226:0:0:0,-1.80618,-10 1/1:69.5136:28:0:0:28:1004:-10,-8.42884,0 0/0:62.7789:20:20:717:0:0:0,-6.0206,-10 0/0:68.7995:22:22:807:0:0:0,-6.62266,-10 0/1:99:25:13:445:12:432:-10,0,-10 0/0:65.7892:21:21:739:0:0:0,-6.32163,-10 0/0:14.6141:4:4:152:0:0:0,-1.20412,-10 0/0:65.7892:21:21:780:0:0:0,-6.32163,-10 0/0:89.8707:29:29:1087:0:0:0,-8.72987,-10 0/1:99:19:11:411:7:256:-10,0,-10 0/0:68.7995:22:22:817:0:0:0,-6.62266,-10 0/0:20.6347:6:6:206:0:0:0,-1.80618,-10 0/0:29.6656:9:9:320:0:0:0,-2.70927,-10 0/0:41.7068:13:13:465:0:0:0,-3.91339,-10 0/0:62.7789:20:20:708:0:0:0,-6.0206,-10 0/0:38.6965:12:12:454:0:0:0,-3.61236,-10 0/0:26.6553:8:8:295:0:0:0,-2.40824,-10 0/0:23.5031:15:14:523:1:16:0,-1.73936,-10 0/0:50.7377:16:16:592:0:0:0,-4.81648,-10 0/0:14.6141:4:4:152:0:0:0,-1.20412,-10 0/0:26.6553:8:8:304:0:0:0,-2.40824,-10 0/0:35.6862:11:11:371:0:0:0,-3.31133,-10 1/1:24.3591:13:0:0:13:485:-10,-3.91339,0 0/0:50.7377:16:16:594:0:0:0,-4.81648,-10 0/0:23.645:7:7:243:0:0:0,-2.10721,-10 0/1:0.641565:8:0:0:8:295:-10,-2.40824,0 0/0:62.7789:20:20:738:0:0:0,-6.0206,-10 0/0:41.7068:13:13:471:0:0:0,-3.91339,-10 0/0:35.6862:11:11:391:0:0:0,-3.31133,-10 0/1:99:24:14:511:10:377:-10,0,-10 0/0:44.7171:14:14:504:0:0:0,-4.21442,-10 0/0:56.7583:18:18:625:0:0:0,-5.41854,-10 0/0:92.8801:30:30:1079:0:0:0,-9.0309,-10 0/1:99:15:8:300:7:259:-10,0,-10 0/0:41.7068:13:13:414:0:0:0,-3.91339,-10 0/0:99:38:38:1403:0:0:0,-10,-10 0/0:56.7583:18:18:650:0:0:0,-5.41854,-10 0/0:47.7274:16:15:569:0:0:0,-4.51545,-10 0/0:92.8801:30:30:1046:0:0:0,-9.0309,-10 0/0:26.6553:8:8:300:0:0:0,-2.40824,-10 0/0:80.8406:26:26:940:0:0:0,-7.82678,-10 0/0:35.6862:11:11:406:0:0:0,-3.31133,-10 0/0:14.6141:4:4:151:0:0:0,-1.20412,-10 0/0:77.8304:25:25:862:0:0:0,-7.52575,-10 0/0:50.7377:16:16:605:0:0:0,-4.81648,-10 0/0:56.7583:18:18:646:0:0:0,-5.41854,-10 0/0:32.6759:10:10:377:0:0:0,-3.0103,-10 0/0:38.6965:12:12:442:0:0:0,-3.61236,-10 0/0:44.7171:14:14:520:0:0:0,-4.21442,-10 0/0:83.8508:27:27:995:0:0:0,-8.12781,-10 1/1:30.3797:15:0:0:15:568:-10,-4.51545,0 1/1:45.4312:20:0:0:20:744:-10,-6.0206,0 0/0:35.6862:11:11:401:0:0:0,-3.31133,-10 0/1:0.641565:8:0:0:8:301:-10,-2.40824,0 1/1:45.4312:20:0:0:20:734:-10,-6.0206,0 0/0:35.6862:11:11:377:0:0:0,-3.31133,-10 0/0:47.7274:15:15:507:0:0:0,-4.51545,-10 0/1:99:28:12:431:16:604:-10,0,-10 0/0:20.6347:6:6:223:0:0:0,-1.80618,-10 0/0:47.7274:15:15:536:0:0:0,-4.51545,-10 0/0:59.7686:19:19:680:0:0:0,-5.71957,-10 0/0:65.7892:21:21:780:0:0:0,-6.32163,-10 0/0:44.7171:14:14:498:0:0:0,-4.21442,-10 0/0:71.8098:23:23:844:0:0:0,-6.92369,-10 0/0:44.7171:14:14:531:0:0:0,-4.21442,-10 0/0:65.7892:21:21:757:0:0:0,-6.32163,-10 0/0:26.6553:8:8:304:0:0:0,-2.40824,-10 0/1:0.308946:7:0:0:7:257:-10,-2.10721,0 0/0:20.6347:6:6:226:0:0:0,-1.80618,-10 1/1:45.4312:20:0:0:20:690:-10,-6.0206,0 0/1:99:22:9:342:13:453:-10,0,-10 0/1:99:22:14:497:8:296:-10,0,-10 1/1:12.3179:9:0:0:9:311:-10,-2.70927,0 0/0:68.7995:22:22:829:0:0:0,-6.62266,-10 0/0:26.6553:8:8:279:0:0:0,-2.40824,-10 0/0:44.7171:14:14:516:0:0:0,-4.21442,-10 0/0:29.6656:9:9:335:0:0:0,-2.70927,-10 0/1:51.4811:8:1:37:7:265:-10,0,-2.19485 0/0:47.7274:15:15:548:0:0:0,-4.51545,-10 1/1:15.3282:10:0:0:10:357:-10,-3.0103,0 0/0:17.6244:5:5:187:0:0:0,-1.50515,-10 scaffold_120 540574 . A T 475.904 . AB=0.526316;ABP=3.23888;AC=2;AF=0.0108696;AN=184;AO=23;CIGAR=1X;DP=1347;DPB=1347;DPRA=1.29043;EPP=3.10471;EPPR=5.25727;GTI=0;LEN=1;MEANALT=1;MQM=59.2174;MQMR=59.9962;NS=92;NUMALT=1;ODDS=5.78686;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=763;QR=47914;RO=1323;RPP=52.9542;RPPR=2875.87;RUN=1;SAF=12;SAP=3.10471;SAR=11;SRF=643;SRP=5.25727;SRR=680;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.2346:9:9:317:0:0:0,-2.70927,-10 0/0:40.214:7:7:251:0:0:0,-2.10721,-10 0/0:33.538:13:12:451:1:16:0,-1.19945,-10 0/0:52.2552:11:11:374:0:0:0,-3.31133,-10 0/0:46.2346:9:9:338:0:0:0,-2.70927,-10 0/0:34.1934:5:5:189:0:0:0,-1.50515,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:85.3683:22:22:801:0:0:0,-6.62266,-10 0/0:46.2346:9:9:323:0:0:0,-2.70927,-10 0/0:25.1625:2:2:76:0:0:0,-0.60206,-7.22 0/0:49.2449:10:10:327:0:0:0,-3.0103,-10 0/0:37.2037:6:6:206:0:0:0,-1.80618,-10 0/0:67.3067:16:16:566:0:0:0,-4.81648,-10 0/0:79.3479:20:20:723:0:0:0,-6.0206,-10 0/0:82.3581:21:21:796:0:0:0,-6.32163,-10 0/0:73.3273:18:18:635:0:0:0,-5.41854,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:67.3067:16:16:605:0:0:0,-4.81648,-10 0/0:58.2758:13:13:485:0:0:0,-3.91339,-10 0/0:99:35:35:1249:0:0:0,-10,-10 0/0:61.2861:14:14:506:0:0:0,-4.21442,-10 0/0:79.3479:20:20:703:0:0:0,-6.0206,-10 0/0:40.214:7:7:263:0:0:0,-2.10721,-10 0/0:55.2655:12:12:455:0:0:0,-3.61236,-10 0/0:67.3067:16:16:586:0:0:0,-4.81648,-10 0/0:73.3273:18:18:667:0:0:0,-5.41854,-10 0/0:64.2964:15:15:552:0:0:0,-4.51545,-10 0/0:31.1831:4:4:152:0:0:0,-1.20412,-10 0/0:64.2964:15:15:537:0:0:0,-4.51545,-10 0/0:55.2655:12:12:452:0:0:0,-3.61236,-10 0/0:40.214:7:7:241:0:0:0,-2.10721,-10 0/0:58.2758:13:13:469:0:0:0,-3.91339,-10 0/0:38.9371:15:14:524:1:16:0,-1.73936,-10 0/0:49.2449:10:10:378:0:0:0,-3.0103,-10 0/0:49.2449:10:10:348:0:0:0,-3.0103,-10 0/0:46.2346:9:9:334:0:0:0,-2.70927,-10 0/0:49.2449:10:10:358:0:0:0,-3.0103,-10 0/0:99:30:30:1081:0:0:0,-9.0309,-10 0/0:67.3067:16:16:575:0:0:0,-4.81648,-10 0/0:64.2964:15:15:565:0:0:0,-4.51545,-10 0/0:85.3683:22:22:815:0:0:0,-6.62266,-10 0/0:58.2758:13:13:451:0:0:0,-3.91339,-10 0/0:85.3683:22:22:814:0:0:0,-6.62266,-10 0/0:85.3683:22:22:809:0:0:0,-6.62266,-10 0/0:43.2243:8:8:298:0:0:0,-2.40824,-10 0/0:49.2449:10:10:351:0:0:0,-3.0103,-10 0/0:99:44:44:1641:0:0:0,-10,-10 0/0:58.2758:13:13:491:0:0:0,-3.91339,-10 0/0:55.2655:12:12:448:0:0:0,-3.61236,-10 0/0:76.3376:19:19:675:0:0:0,-5.71957,-10 0/0:37.2037:6:6:223:0:0:0,-1.80618,-10 0/0:82.3581:21:21:786:0:0:0,-6.32163,-10 0/0:46.2346:9:9:336:0:0:0,-2.70927,-10 0/0:43.2243:8:8:245:0:0:0,-2.40824,-10 0/0:99:28:28:1008:0:0:0,-8.42884,-10 0/0:40.214:7:7:248:0:0:0,-2.10721,-10 0/0:79.3479:20:20:733:0:0:0,-6.0206,-10 0/0:40.214:7:7:253:0:0:0,-2.10721,-10 0/0:49.2449:10:10:332:0:0:0,-3.0103,-10 0/0:40.214:7:7:239:0:0:0,-2.10721,-10 0/1:99:19:8:272:11:399:-10,0,-10 0/0:49.2449:10:10:321:0:0:0,-3.0103,-10 0/0:82.3581:21:21:743:0:0:0,-6.32163,-10 0/1:99:19:10:346:9:316:-10,0,-10 0/0:46.2346:9:9:326:0:0:0,-2.70927,-10 0/0:94.3977:25:25:928:0:0:0,-7.52575,-10 0/0:55.2655:12:12:406:0:0:0,-3.61236,-10 0/0:37.2037:6:6:224:0:0:0,-1.80618,-10 0/0:82.3581:21:21:730:0:0:0,-6.32163,-10 0/0:43.2243:8:8:298:0:0:0,-2.40824,-10 0/0:55.2655:12:12:406:0:0:0,-3.61236,-10 0/0:99:28:28:1023:0:0:0,-8.42884,-10 0/0:91.3889:25:24:864:0:0:0,-7.22472,-10 0/0:64.2964:15:15:534:0:0:0,-4.51545,-10 0/0:82.3581:21:21:786:0:0:0,-6.32163,-10 0/0:58.2758:13:13:490:0:0:0,-3.91339,-10 0/0:64.2964:15:15:541:0:0:0,-4.51545,-10 0/0:40.214:7:7:266:0:0:0,-2.10721,-10 0/0:37.2037:6:6:220:0:0:0,-1.80618,-10 0/0:49.2449:10:10:340:0:0:0,-3.0103,-10 0/0:97.4063:26:26:944:0:0:0,-7.82678,-10 0/0:67.3067:16:16:589:0:0:0,-4.81648,-10 0/0:43.2243:8:8:301:0:0:0,-2.40824,-10 0/0:58.2758:13:13:476:0:0:0,-3.91339,-10 0/0:72.508:27:26:939:1:16:0,-5.09645,-10 0/0:37.2037:6:6:210:0:0:0,-1.80618,-10 0/0:64.2964:15:15:559:0:0:0,-4.51545,-10 0/0:43.2243:8:8:302:0:0:0,-2.40824,-10 0/0:40.214:7:7:261:0:0:0,-2.10721,-10 0/0:67.3067:16:16:577:0:0:0,-4.81648,-10 0/0:61.2861:14:14:457:0:0:0,-4.21442,-10 0/0:67.3067:16:16:551:0:0:0,-4.81648,-10 scaffold_120 976286 . C G 1226.74 . AB=0.54386;ABP=3.9627;AC=5;AF=0.0271739;AN=184;AO=52;CIGAR=1X;DP=1409;DPB=1409;DPRA=1.28926;EPP=19.7139;EPPR=7.67993;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9145;NS=92;NUMALT=1;ODDS=0.171567;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1887;QR=50145;RO=1356;RPP=115.927;RPPR=2767.95;RUN=1;SAF=16;SAP=19.7139;SAR=36;SRF=670;SRP=3.42025;SRR=686;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.241:13:13:494:0:0:0,-3.91339,-10 0/0:26.1586:5:5:190:0:0:0,-1.50515,-10 0/0:62.2822:17:17:635:0:0:0,-5.11751,-10 0/0:38.1998:9:9:342:0:0:0,-2.70927,-10 0/0:53.2513:14:14:501:0:0:0,-4.21442,-10 0/0:35.1895:8:8:250:0:0:0,-2.40824,-10 0/0:83.3542:24:24:902:0:0:0,-7.22472,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:44.2204:11:11:417:0:0:0,-3.31133,-10 0/0:29.1689:6:6:222:0:0:0,-1.80618,-10 0/0:35.1895:8:8:301:0:0:0,-2.40824,-10 0/0:38.1998:9:9:342:0:0:0,-2.70927,-10 0/0:89.3749:26:26:960:0:0:0,-7.82678,-10 0/0:71.3131:20:20:759:0:0:0,-6.0206,-10 0/0:99:31:31:1162:0:0:0,-9.33193,-10 0/0:71.3131:20:20:753:0:0:0,-6.0206,-10 0/0:74.3234:21:21:760:0:0:0,-6.32163,-10 0/0:35.1895:8:8:299:0:0:0,-2.40824,-10 0/0:80.344:23:23:842:0:0:0,-6.92369,-10 0/1:99:32:5:190:27:964:-10,0,-10 0/0:71.3131:20:20:742:0:0:0,-6.0206,-10 0/0:74.3234:21:21:795:0:0:0,-6.32163,-10 0/0:38.1998:9:9:342:0:0:0,-2.70927,-10 0/0:59.2719:16:16:593:0:0:0,-4.81648,-10 0/0:41.2101:10:10:380:0:0:0,-3.0103,-10 0/0:53.2513:14:14:503:0:0:0,-4.21442,-10 0/0:44.2204:11:11:395:0:0:0,-3.31133,-10 0/0:41.2101:10:10:368:0:0:0,-3.0103,-10 0/0:47.2307:12:12:450:0:0:0,-3.61236,-10 0/0:68.3028:19:19:700:0:0:0,-5.71957,-10 0/0:23.1483:4:4:152:0:0:0,-1.20412,-10 0/0:44.2204:11:11:392:0:0:0,-3.31133,-10 0/0:53.2513:14:14:531:0:0:0,-4.21442,-10 0/0:41.2101:10:10:377:0:0:0,-3.0103,-10 0/0:65.2925:18:18:666:0:0:0,-5.41854,-10 0/0:32.1792:7:7:263:0:0:0,-2.10721,-10 0/0:50.241:13:13:491:0:0:0,-3.91339,-10 0/0:80.344:23:23:830:0:0:0,-6.92369,-10 0/0:35.1895:8:8:294:0:0:0,-2.40824,-10 0/1:63.7734:11:8:303:3:101:-8.33282,0,-10 0/0:92.3853:27:27:989:0:0:0,-8.12781,-10 0/0:47.2307:12:12:427:0:0:0,-3.61236,-10 0/0:68.3028:19:19:696:0:0:0,-5.71957,-10 1/1:23.2872:21:0:0:21:784:-10,-6.32163,0 0/0:35.1895:8:8:301:0:0:0,-2.40824,-10 0/0:59.2719:16:16:604:0:0:0,-4.81648,-10 0/0:92.3853:27:27:1016:0:0:0,-8.12781,-10 0/0:71.3131:20:20:740:0:0:0,-6.0206,-10 0/0:47.2307:12:12:453:0:0:0,-3.61236,-10 0/0:99:33:33:1233:0:0:0,-9.93399,-10 0/0:23.1483:4:4:142:0:0:0,-1.20412,-10 0/0:89.3749:26:26:946:0:0:0,-7.82678,-10 0/0:29.1689:6:6:218:0:0:0,-1.80618,-10 0/0:26.1586:5:5:190:0:0:0,-1.50515,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:44.2204:11:11:409:0:0:0,-3.31133,-10 0/0:47.2307:12:12:423:0:0:0,-3.61236,-10 0/0:32.1792:7:7:232:0:0:0,-2.10721,-10 0/0:44.2204:11:11:409:0:0:0,-3.31133,-10 0/0:35.1895:8:8:291:0:0:0,-2.40824,-10 0/0:99:34:34:1272:0:0:0,-10,-10 0/0:44.2204:11:11:380:0:0:0,-3.31133,-10 0/1:3.56199:14:13:467:1:38:-0.731708,0,-10 0/0:35.1895:8:8:274:0:0:0,-2.40824,-10 0/0:68.3028:19:19:721:0:0:0,-5.71957,-10 0/0:86.3646:25:25:931:0:0:0,-7.52575,-10 0/0:83.3542:24:24:899:0:0:0,-7.22472,-10 0/0:56.2616:15:15:547:0:0:0,-4.51545,-10 0/0:68.3028:19:19:718:0:0:0,-5.71957,-10 0/0:41.2101:10:10:375:0:0:0,-3.0103,-10 0/0:53.2513:14:14:531:0:0:0,-4.21442,-10 0/0:92.3853:27:27:996:0:0:0,-8.12781,-10 0/0:59.2719:16:16:603:0:0:0,-4.81648,-10 0/0:35.1895:8:8:301:0:0:0,-2.40824,-10 0/0:71.3131:20:20:731:0:0:0,-6.0206,-10 0/0:38.1998:9:9:341:0:0:0,-2.70927,-10 0/0:50.241:13:13:484:0:0:0,-3.91339,-10 0/0:35.1895:8:8:301:0:0:0,-2.40824,-10 0/0:23.1483:5:4:152:0:0:0,-1.20412,-10 0/0:23.1483:4:4:152:0:0:0,-1.20412,-10 0/0:80.344:23:23:866:0:0:0,-6.92369,-10 0/0:56.2616:15:15:550:0:0:0,-4.51545,-10 0/0:53.2513:14:14:531:0:0:0,-4.21442,-10 0/0:71.3131:20:20:755:0:0:0,-6.0206,-10 0/0:59.2719:16:16:586:0:0:0,-4.81648,-10 0/0:50.241:13:13:484:0:0:0,-3.91339,-10 0/0:50.241:13:13:459:0:0:0,-3.91339,-10 0/0:71.3131:20:20:718:0:0:0,-6.0206,-10 0/0:35.1895:8:8:297:0:0:0,-2.40824,-10 0/0:80.344:23:23:823:0:0:0,-6.92369,-10 0/0:56.2616:15:15:544:0:0:0,-4.51545,-10 0/0:50.241:13:13:460:0:0:0,-3.91339,-10 scaffold_120 1082942 . T C 2064.97 . AB=0.504587;ABP=3.03022;AC=5;AF=0.0271739;AN=184;AO=81;CIGAR=1X;DP=2003;DPB=2003;DPRA=1.32933;EPP=4.32391;EPPR=7.64277;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9177;NS=92;NUMALT=1;ODDS=2.91847;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2864;QR=70590;RO=1920;RPP=178.9;RPPR=4172.24;RUN=1;SAF=44;SAP=4.32391;SAR=37;SRF=992;SRP=7.64277;SRR=928;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.2578:15:15:547:0:0:0,-4.51545,-10 0/0:22.1754:7:7:263:0:0:0,-2.10721,-10 0/0:61.3093:20:20:723:0:0:0,-6.0206,-10 0/0:70.3402:23:23:844:0:0:0,-6.92369,-10 0/0:37.2269:12:12:454:0:0:0,-3.61236,-10 0/0:43.2475:14:14:517:0:0:0,-4.21442,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:58.299:19:19:702:0:0:0,-5.71957,-10 1/1:42.4909:24:0:0:24:910:-10,-7.22472,0 0/0:25.1857:8:8:295:0:0:0,-2.40824,-10 0/0:28.196:9:9:329:0:0:0,-2.70927,-10 0/0:34.2166:11:11:410:0:0:0,-3.31133,-10 0/0:76.3608:25:25:876:0:0:0,-7.52575,-10 0/0:97.4265:32:32:1169:0:0:0,-9.63296,-10 0/0:85.3913:28:28:1019:0:0:0,-8.42884,-10 0/0:91.4107:30:30:1097:0:0:0,-9.0309,-10 0/0:52.2784:17:17:646:0:0:0,-5.11751,-10 0/0:22.1754:7:7:266:0:0:0,-2.10721,-10 0/0:64.3196:21:21:751:0:0:0,-6.32163,-10 0/0:88.4012:30:29:1062:0:0:0,-8.72987,-10 0/0:43.2475:14:14:523:0:0:0,-4.21442,-10 0/0:79.371:26:26:961:0:0:0,-7.82678,-10 0/0:34.2166:11:11:414:0:0:0,-3.31133,-10 0/0:99:33:33:1252:0:0:0,-9.93399,-10 0/0:67.3299:22:22:836:0:0:0,-6.62266,-10 0/0:94.4221:31:31:1155:0:0:0,-9.33193,-10 0/0:61.3093:20:20:690:0:0:0,-6.0206,-10 0/0:43.2475:14:14:531:0:0:0,-4.21442,-10 0/0:67.3299:22:22:809:0:0:0,-6.62266,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:25.1857:8:8:257:0:0:0,-2.40824,-10 0/0:25.1857:8:8:281:0:0:0,-2.40824,-10 0/0:61.3093:20:20:722:0:0:0,-6.0206,-10 0/0:40.2372:13:13:492:0:0:0,-3.91339,-10 0/0:61.3093:20:20:740:0:0:0,-6.0206,-10 0/0:19.1651:6:6:228:0:0:0,-1.80618,-10 0/0:37.2269:12:12:456:0:0:0,-3.61236,-10 0/0:99:35:35:1268:0:0:0,-10,-10 0/0:49.2681:16:16:599:0:0:0,-4.81648,-10 0/0:58.299:19:19:693:0:0:0,-5.71957,-10 0/0:99:35:35:1311:0:0:0,-10,-10 0/0:97.4265:32:32:1188:0:0:0,-9.63296,-10 0/0:55.2887:18:18:661:0:0:0,-5.41854,-10 0/0:99:54:54:1983:0:0:0,-10,-10 0/0:61.3093:20:20:723:0:0:0,-6.0206,-10 0/0:67.3299:22:22:826:0:0:0,-6.62266,-10 0/0:99:56:56:2055:0:0:0,-10,-10 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:61.3093:20:20:758:0:0:0,-6.0206,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:43.2475:14:14:530:0:0:0,-4.21442,-10 0/0:99:34:34:1251:0:0:0,-10,-10 0/0:88.4012:29:29:1095:0:0:0,-8.72987,-10 0/0:37.2269:12:12:420:0:0:0,-3.61236,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:58.299:19:19:677:0:0:0,-5.71957,-10 0/0:94.4221:31:31:1124:0:0:0,-9.33193,-10 0/0:34.2166:11:11:410:0:0:0,-3.31133,-10 0/0:76.3608:25:25:905:0:0:0,-7.52575,-10 0/0:43.2475:14:14:490:0:0:0,-4.21442,-10 0/1:99:34:18:658:16:550:-10,0,-10 0/0:29.1943:17:16:581:1:14:0,-2.48706,-10 0/1:99:56:24:907:32:1130:-10,0,-10 0/1:99:19:12:433:7:244:-10,0,-10 0/0:52.2784:17:17:629:0:0:0,-5.11751,-10 0/0:91.4107:30:30:1118:0:0:0,-9.0309,-10 0/0:91.4107:30:30:1124:0:0:0,-9.0309,-10 0/0:31.2063:10:10:357:0:0:0,-3.0103,-10 0/0:94.4221:31:31:1164:0:0:0,-9.33193,-10 0/0:46.2578:15:15:562:0:0:0,-4.51545,-10 0/0:58.299:19:19:721:0:0:0,-5.71957,-10 0/0:73.3505:24:24:843:0:0:0,-7.22472,-10 0/0:70.3402:23:23:861:0:0:0,-6.92369,-10 0/0:22.1754:7:7:243:0:0:0,-2.10721,-10 0/0:99:35:34:1245:0:0:0,-10,-10 0/0:49.2681:16:16:607:0:0:0,-4.81648,-10 0/0:55.2887:18:18:628:0:0:0,-5.41854,-10 0/0:43.2475:14:14:523:0:0:0,-4.21442,-10 0/0:28.196:9:9:342:0:0:0,-2.70927,-10 0/0:37.0244:20:19:683:1:16:0,-3.11957,-10 0/0:99:51:51:1784:0:0:0,-10,-10 0/0:97.4265:32:32:1173:0:0:0,-9.63296,-10 0/0:67.3299:22:22:824:0:0:0,-6.62266,-10 0/0:46.2578:15:15:554:0:0:0,-4.51545,-10 0/0:85.3913:28:28:1032:0:0:0,-8.42884,-10 0/0:22.1754:7:7:266:0:0:0,-2.10721,-10 0/0:34.2166:11:11:417:0:0:0,-3.31133,-10 0/0:55.2887:18:18:679:0:0:0,-5.41854,-10 0/0:13.1445:4:4:143:0:0:0,-1.20412,-10 0/0:31.2063:10:10:369:0:0:0,-3.0103,-10 0/0:52.2784:17:17:630:0:0:0,-5.11751,-10 0/0:67.3299:22:22:808:0:0:0,-6.62266,-10 scaffold_120 1322660 . G A 315.421 . AB=0.541667;ABP=3.37221;AC=1;AF=0.00543478;AN=184;AO=17;CIGAR=1X;DP=1532;DPB=1532;DPRA=1.00614;EPP=13.3567;EPPR=3.15373;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9491;NS=92;NUMALT=1;ODDS=6.5794;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=550;QR=55089;RO=1514;RPP=39.9253;RPPR=3178.67;RUN=1;SAF=4;SAP=13.3567;SAR=13;SRF=749;SRP=3.37747;SRR=765;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:67.73:15:15:548:0:0:0,-4.51545,-10 0/0:52.6785:10:10:344:0:0:0,-3.0103,-10 0/0:58.6991:12:12:445:0:0:0,-3.61236,-10 0/0:34.6167:4:4:144:0:0:0,-1.20412,-10 0/0:70.7403:16:16:588:0:0:0,-4.81648,-10 0/0:61.7094:13:13:479:0:0:0,-3.91339,-10 0/0:91.8119:23:23:867:0:0:0,-6.92369,-10 0/0:88.8019:22:22:781:0:0:0,-6.62266,-10 0/0:55.6888:11:11:417:0:0:0,-3.31133,-10 0/0:43.6476:7:7:252:0:0:0,-2.10721,-10 0/0:40.6373:6:6:218:0:0:0,-1.80618,-10 0/0:46.6579:8:8:289:0:0:0,-2.40824,-10 0/0:99:36:36:1262:0:0:0,-10,-10 0/0:99:29:29:1080:0:0:0,-8.72987,-10 0/0:88.8019:22:22:831:0:0:0,-6.62266,-10 0/0:67.73:15:15:542:0:0:0,-4.51545,-10 0/0:67.73:15:15:531:0:0:0,-4.51545,-10 0/0:46.6579:8:8:304:0:0:0,-2.40824,-10 0/0:67.73:16:15:538:0:0:0,-4.51545,-10 0/0:99:31:31:1104:0:0:0,-9.33193,-10 0/0:55.6888:11:11:407:0:0:0,-3.31133,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:29.492:9:8:298:1:16:0,-0.155027,-10 0/0:67.73:15:15:542:0:0:0,-4.51545,-10 0/0:99:26:26:971:0:0:0,-7.82678,-10 0/0:61.7094:13:13:489:0:0:0,-3.91339,-10 0/0:82.7814:20:20:714:0:0:0,-6.0206,-10 0/0:49.6682:9:9:329:0:0:0,-2.70927,-10 0/0:73.7506:17:17:633:0:0:0,-5.11751,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:28.5961:2:2:76:0:0:0,-0.60206,-7.22 0/0:52.6785:10:10:374:0:0:0,-3.0103,-10 0/0:0.00204446:17:15:564:2:32:-0.056029,0,-10 0/0:67.73:15:15:562:0:0:0,-4.51545,-10 0/0:67.73:15:15:514:0:0:0,-4.51545,-10 0/0:43.6476:7:7:263:0:0:0,-2.10721,-10 0/0:58.6991:12:12:447:0:0:0,-3.61236,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:64.7197:14:14:440:0:0:0,-4.21442,-10 0/0:49.6682:9:9:336:0:0:0,-2.70927,-10 0/0:79.7711:19:19:689:0:0:0,-5.71957,-10 0/0:49.6682:9:9:337:0:0:0,-2.70927,-10 0/0:85.7917:21:21:767:0:0:0,-6.32163,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:79.7711:19:19:704:0:0:0,-5.71957,-10 0/0:76.7609:18:18:669:0:0:0,-5.41854,-10 0/0:99:39:39:1448:0:0:0,-10,-10 0/0:64.7197:14:14:521:0:0:0,-4.21442,-10 0/0:64.7197:14:14:501:0:0:0,-4.21442,-10 0/0:99:33:33:1156:0:0:0,-9.93399,-10 0/0:61.7094:13:13:451:0:0:0,-3.91339,-10 0/0:99:29:29:1057:0:0:0,-8.72987,-10 0/0:46.6579:8:8:300:0:0:0,-2.40824,-10 0/0:37.627:5:5:189:0:0:0,-1.50515,-10 0/0:99:26:26:931:0:0:0,-7.82678,-10 0/0:64.7197:14:14:459:0:0:0,-4.21442,-10 0/0:79.7711:19:19:710:0:0:0,-5.71957,-10 0/0:64.7197:14:14:460:0:0:0,-4.21442,-10 0/0:67.73:15:15:569:0:0:0,-4.51545,-10 0/0:40.6373:6:6:202:0:0:0,-1.80618,-10 0/0:99:34:34:1215:0:0:0,-10,-10 0/0:73.7506:17:17:645:0:0:0,-5.11751,-10 0/0:99:37:37:1394:0:0:0,-10,-10 0/0:61.7094:13:13:467:0:0:0,-3.91339,-10 0/0:67.73:15:15:529:0:0:0,-4.51545,-10 0/0:64.7197:14:14:514:0:0:0,-4.21442,-10 0/0:94.8218:24:24:880:0:0:0,-7.22472,-10 0/0:52.6785:10:10:373:0:0:0,-3.0103,-10 0/0:76.7609:18:18:659:0:0:0,-5.41854,-10 0/0:37.627:5:5:190:0:0:0,-1.50515,-10 0/0:67.73:15:15:569:0:0:0,-4.51545,-10 0/0:99:28:28:1044:0:0:0,-8.42884,-10 0/1:99:24:11:387:13:486:-10,0,-10 0/0:70.7403:16:16:597:0:0:0,-4.81648,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:64.7197:14:14:524:0:0:0,-4.21442,-10 0/0:61.7094:13:13:429:0:0:0,-3.91339,-10 0/0:58.6991:12:12:428:0:0:0,-3.61236,-10 0/0:31.6064:3:3:114:0:0:0,-0.90309,-10 0/0:40.6373:6:6:228:0:0:0,-1.80618,-10 0/0:99:26:26:928:0:0:0,-7.82678,-10 0/0:70.7403:16:16:585:0:0:0,-4.81648,-10 0/0:64.7197:14:14:517:0:0:0,-4.21442,-10 0/0:76.7609:18:18:648:0:0:0,-5.41854,-10 0/0:99:28:28:1028:0:0:0,-8.42884,-10 0/0:43.6476:7:7:239:0:0:0,-2.10721,-10 0/0:50.8123:17:16:554:1:16:0,-2.28706,-10 0/0:73.7506:17:17:613:0:0:0,-5.11751,-10 0/0:37.627:5:5:168:0:0:0,-1.50515,-10 0/0:76.7609:18:18:628:0:0:0,-5.41854,-10 0/0:76.7609:18:18:671:0:0:0,-5.41854,-10 0/0:49.6682:9:9:334:0:0:0,-2.70927,-10 scaffold_120 1323479 . C T 5013.28 . AB=0.507042;ABP=3.10205;AC=13;AF=0.0706522;AN=184;AO=182;CIGAR=1X;DP=2430;DPB=2430;DPRA=1.19382;EPP=5.34881;EPPR=9.04152;GTI=0;LEN=1;MEANALT=1.09091;MQM=59.9231;MQMR=59.9493;NS=92;NUMALT=1;ODDS=4.03063;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6663;QR=82056;RO=2247;RPP=398.218;RPPR=4882.31;RUN=1;SAF=98;SAP=5.34881;SAR=84;SRF=1084;SRP=9.04152;SRR=1163;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:66.8085:19:19:699:0:0:0,-5.71957,-10 0/0:48.7467:13:13:477:0:0:0,-3.91339,-10 0/0:72.8291:21:21:772:0:0:0,-6.32163,-10 0/0:63.7982:18:18:640:0:0:0,-5.41854,-10 0/1:99:18:9:329:9:341:-10,0,-10 0/0:51.757:14:14:469:0:0:0,-4.21442,-10 1/1:77.9035:37:0:0:37:1381:-10,-10,0 0/0:99:36:36:1347:0:0:0,-10,-10 0/0:81.86:24:24:867:0:0:0,-7.22472,-10 0/0:30.6849:7:7:261:0:0:0,-2.10721,-10 0/0:39.7158:10:10:367:0:0:0,-3.0103,-10 0/0:30.6849:7:7:251:0:0:0,-2.10721,-10 0/0:99:53:53:1907:0:0:0,-10,-10 0/0:99:49:49:1791:0:0:0,-10,-10 0/0:99:47:47:1712:0:0:0,-10,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/1:99:40:22:834:18:676:-10,0,-10 1/1:23.7181:19:0:0:19:706:-10,-5.71957,0 0/1:99:34:18:636:16:593:-10,0,-10 0/0:99:49:49:1787:0:0:0,-10,-10 0/0:93.8988:28:28:1034:0:0:0,-8.42884,-10 0/0:99:38:38:1333:0:0:0,-10,-10 0/0:60.7879:17:17:582:0:0:0,-5.11751,-10 0/1:99:32:11:414:20:702:-10,0,-10 0/0:93.8988:28:28:962:0:0:0,-8.42884,-10 0/0:99:36:36:1267:0:0:0,-10,-10 0/0:81.86:24:24:862:0:0:0,-7.22472,-10 0/0:45.7364:12:12:456:0:0:0,-3.61236,-10 0/0:78.8497:23:23:826:0:0:0,-6.92369,-10 0/0:99:34:34:1276:0:0:0,-10,-10 0/0:24.6643:5:5:190:0:0:0,-1.50515,-10 0/0:18.6437:3:3:91:0:0:0,-0.90309,-8.49333 0/0:72.8291:21:21:748:0:0:0,-6.32163,-10 0/0:54.7673:15:15:557:0:0:0,-4.51545,-10 0/0:69.8188:20:20:729:0:0:0,-6.0206,-10 0/0:27.6746:6:6:227:0:0:0,-1.80618,-10 0/0:72.8291:21:21:791:0:0:0,-6.32163,-10 0/0:99:40:40:1474:0:0:0,-10,-10 0/0:87.8806:26:26:936:0:0:0,-7.82678,-10 0/0:60.7879:17:17:605:0:0:0,-5.11751,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:87.8806:26:26:967:0:0:0,-7.82678,-10 0/0:99:33:33:1177:0:0:0,-9.93399,-10 0/0:99:38:38:1386:0:0:0,-10,-10 0/0:93.8988:28:28:1039:0:0:0,-8.42884,-10 0/0:96.9115:29:29:1080:0:0:0,-8.72987,-10 0/0:99:53:52:1908:1:16:0,-10,-10 0/0:99:34:34:1201:0:0:0,-10,-10 0/0:96.9115:29:29:1055:0:0:0,-8.72987,-10 0/0:99:55:55:2032:0:0:0,-10,-10 0/0:45.7364:12:12:423:0:0:0,-3.61236,-10 0/0:99:54:54:1974:0:0:0,-10,-10 0/0:63.7982:18:18:673:0:0:0,-5.41854,-10 0/0:39.7158:10:10:355:0:0:0,-3.0103,-10 0/0:99:59:59:2173:0:0:0,-10,-10 0/0:90.8897:27:27:985:0:0:0,-8.12781,-10 0/1:99:23:8:273:15:539:-10,0,-10 0/0:36.7055:9:9:292:0:0:0,-2.70927,-10 0/0:99:32:32:1155:0:0:0,-9.63296,-10 0/0:48.7467:13:13:476:0:0:0,-3.91339,-10 0/1:99:43:20:707:23:850:-10,0,-10 0/0:90.8897:27:27:987:0:0:0,-8.12781,-10 0/0:99:53:53:1952:0:0:0,-10,-10 0/1:99:23:16:578:7:255:-10,0,-10 0/0:45.7364:12:12:450:0:0:0,-3.61236,-10 0/0:99:39:39:1459:0:0:0,-10,-10 0/0:96.9115:29:29:1084:0:0:0,-8.72987,-10 0/0:42.7261:11:11:396:0:0:0,-3.31133,-10 0/0:99:46:46:1705:0:0:0,-10,-10 0/0:42.7261:11:11:395:0:0:0,-3.31133,-10 0/0:42.7261:11:11:391:0:0:0,-3.31133,-10 0/0:99:39:39:1463:0:0:0,-10,-10 0/0:99:37:37:1352:0:0:0,-10,-10 0/0:78.8497:23:23:841:0:0:0,-6.92369,-10 0/0:99:34:34:1231:0:0:0,-10,-10 0/0:54.7673:15:15:551:0:0:0,-4.51545,-10 0/0:84.87:25:25:924:0:0:0,-7.52575,-10 1/1:17.6975:17:0:0:17:604:-10,-5.11751,0 0/0:42.7261:11:11:416:0:0:0,-3.31133,-10 0/0:48.7467:13:13:457:0:0:0,-3.91339,-10 0/0:99:51:51:1902:0:0:0,-10,-10 0/0:99:41:41:1463:0:0:0,-10,-10 0/0:69.8188:20:20:753:0:0:0,-6.0206,-10 0/0:99:33:33:1219:0:0:0,-9.93399,-10 0/0:90.8897:27:27:1024:0:0:0,-8.12781,-10 0/0:45.7364:12:12:452:0:0:0,-3.61236,-10 0/0:75.8394:22:22:831:0:0:0,-6.62266,-10 0/0:63.7982:18:18:679:0:0:0,-5.41854,-10 0/0:30.6849:7:7:244:0:0:0,-2.10721,-10 0/0:69.8188:20:20:759:0:0:0,-6.0206,-10 0/0:75.8394:22:22:808:0:0:0,-6.62266,-10 0/0:78.8497:23:23:824:0:0:0,-6.92369,-10 scaffold_120 1403008 . GGAGAGCT G 350.545 . AB=0.555556;ABP=3.73412;AC=1;AF=0.00543478;AN=184;AO=15;CIGAR=1M7D1M;DP=2306;DPB=2294.33;DPRA=1.0781;EPP=3.15506;EPPR=6.13341;GTI=0;LEN=7;MEANALT=1;MQM=56.1333;MQMR=59.9858;NS=92;NUMALT=1;ODDS=12.0479;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=521;QR=81960;RO=2259;RPP=35.5824;RPPR=4070.31;RUN=1;SAF=8;SAP=3.15506;SAR=7;SRF=1125;SRP=3.08816;SRR=1134;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:85.4364:19:17:604:0:0:0,-5.11751,-10 0|0:79.4161:15:15:547:0:0:0,-4.51545,-10 0|0:91.456:19:19:680:0:0:0,-5.71957,-10 0|0:61.3543:9:9:328:0:0:0,-2.70927,-10 0|0:99:22:22:782:0:0:0,-6.62266,-10 0|0:67.3749:12:11:413:0:0:0,-3.31133,-10 0|0:99:48:47:1680:0:0:0,-10,-10 0|0:99:37:36:1321:0:0:0,-10,-10 0|0:94.4649:20:20:705:0:0:0,-6.0206,-10 0|0:55.3337:7:7:251:0:0:0,-2.10721,-10 0|0:61.3543:9:9:320:0:0:0,-2.70927,-10 0|0:64.3646:10:10:342:0:0:0,-3.0103,-10 0|0:99:39:36:1312:0:0:0,-10,-10 0|0:99:55:55:2003:0:0:0,-10,-10 0|0:99:45:44:1606:0:0:0,-10,-10 0|0:99:30:30:1097:0:0:0,-9.0309,-10 0|0:99:29:29:1052:0:0:0,-8.72987,-10 0|0:85.4364:17:17:624:0:0:0,-5.11751,-10 0|0:88.4471:18:18:661:0:0:0,-5.41854,-10 0|0:99:48:47:1696:0:0:0,-10,-10 0|0:85.4364:18:17:623:0:0:0,-5.11751,-10 0|0:99:46:46:1626:0:0:0,-10,-10 0|0:97.4725:21:21:764:0:0:0,-6.32163,-10 0|0:99:25:25:911:0:0:0,-7.52575,-10 0|0:88.4471:19:18:651:0:0:0,-5.41854,-10 0|0:99:33:33:1205:0:0:0,-9.93399,-10 0|0:88.4471:18:18:651:0:0:0,-5.41854,-10 0|0:99:25:24:859:0:0:0,-7.22472,-10 0|0:67.3749:11:11:396:0:0:0,-3.31133,-10 0|0:99:48:47:1673:0:0:0,-10,-10 0|0:70.3852:12:12:447:0:0:0,-3.61236,-10 0|0:61.3543:9:9:335:0:0:0,-2.70927,-10 0|0:99:24:24:867:0:0:0,-7.22472,-10 0|0:94.4649:20:20:725:0:0:0,-6.0206,-10 0|0:99:31:31:1126:0:0:0,-9.33193,-10 0|0:79.4161:15:15:556:0:0:0,-4.51545,-10 0|0:76.4058:14:14:495:0:0:0,-4.21442,-10 0|0:99:40:40:1469:0:0:0,-10,-10 0|0:70.3852:13:12:427:0:0:0,-3.61236,-10 0|0:94.4649:20:20:743:0:0:0,-6.0206,-10 0|0:99:37:37:1367:0:0:0,-10,-10 0|0:99:28:28:985:0:0:0,-8.42884,-10 0|0:85.4364:17:17:623:0:0:0,-5.11751,-10 0|0:99:40:40:1414:0:0:0,-10,-10 0|0:99:26:26:947:0:0:0,-7.82678,-10 0|0:82.4263:16:16:585:0:0:0,-4.81648,-10 0|0:99:54:54:1965:0:0:0,-10,-10 0|0:99:42:42:1491:0:0:0,-10,-10 0|0:91.456:19:19:688:0:0:0,-5.71957,-10 0|0:99:49:48:1748:0:0:0,-10,-10 0|0:79.4161:16:15:539:0:0:0,-4.51545,-10 0|0:99:35:35:1304:0:0:0,-10,-10 0|0:58.344:8:8:296:0:0:0,-2.40824,-10 0|0:64.3646:10:10:370:0:0:0,-3.0103,-10 0|0:99:48:47:1723:0:0:0,-10,-10 0|0:88.4471:18:18:641:0:0:0,-5.41854,-10 0|0:99:28:28:1025:0:0:0,-8.42884,-10 0|0:76.4058:14:14:513:0:0:0,-4.21442,-10 0|0:85.4364:17:17:608:0:0:0,-5.11751,-10 0|0:70.3852:12:12:446:0:0:0,-3.61236,-10 0|0:99:48:47:1713:0:0:0,-10,-10 0|0:99:30:29:1061:0:0:0,-8.72987,-10 0|0:99:42:42:1502:0:0:0,-10,-10 0|0:99:25:25:886:0:0:0,-7.52575,-10 0|0:67.3749:11:11:403:0:0:0,-3.31133,-10 0|0:99:32:29:1074:0:0:0,-8.72987,-10 0|0:99:25:25:901:0:0:0,-7.52575,-10 0|0:79.4161:15:15:557:0:0:0,-4.51545,-10 0|0:99:42:42:1519:0:0:0,-10,-10 0|0:99:24:24:870:0:0:0,-7.22472,-10 0|0:97.4725:22:21:779:0:0:0,-6.32163,-10 0|1:99:27:12:449:15:521:-10,0,-10 0|0:99:31:31:1146:0:0:0,-9.33193,-10 0|0:99:26:26:965:0:0:0,-7.82678,-10 0|0:99:30:30:1113:0:0:0,-9.0309,-10 0|0:64.3646:10:10:372:0:0:0,-3.0103,-10 0|0:85.4364:18:17:609:0:0:0,-5.11751,-10 0|0:99:22:22:785:0:0:0,-6.62266,-10 0|0:58.344:8:8:291:0:0:0,-2.40824,-10 0|0:67.3749:11:11:398:0:0:0,-3.31133,-10 0|0:99:31:29:1061:0:0:0,-8.72987,-10 0|0:99:41:40:1438:0:0:0,-10,-10 0|0:99:26:25:900:0:0:0,-7.52575,-10 0|0:99:32:32:1151:0:0:0,-9.63296,-10 0|0:99:25:24:880:0:0:0,-7.22472,-10 0|0:79.4161:15:15:532:0:0:0,-4.51545,-10 0|0:99:27:27:972:0:0:0,-8.12781,-10 0|0:82.4263:17:16:595:0:0:0,-4.81648,-10 0|0:52.3234:7:6:203:0:0:0,-1.80618,-10 0|0:99:25:25:923:0:0:0,-7.52575,-10 0|0:99:32:32:1168:0:0:0,-9.63296,-10 0|0:99:25:25:893:0:0:0,-7.52575,-10 scaffold_120 1416440 . A C 439.373 . AB=0.62963;ABP=6.95112;AC=1;AF=0.00543478;AN=184;AO=19;CIGAR=1X;DP=2520;DPB=2520;DPRA=0.723577;EPP=4.03889;EPPR=3.01117;GTI=0;LEN=1;MEANALT=1;MQM=59.7895;MQMR=59.9984;NS=92;NUMALT=1;ODDS=10.0758;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=660;QR=90850;RO=2499;RPP=44.2683;RPPR=5429.52;RUN=1;SAF=11;SAP=4.03889;SAR=8;SRF=1250;SRP=3.01117;SRR=1249;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:79.1071:15:15:534:0:0:0,-4.51545,-10 0/0:76.0968:14:14:484:0:0:0,-4.21442,-10 0/0:99:28:28:1055:0:0:0,-8.42884,-10 0/0:94.1552:20:20:755:0:0:0,-6.0206,-10 0/0:67.0659:11:11:414:0:0:0,-3.31133,-10 0/0:73.0865:13:13:484:0:0:0,-3.91339,-10 0/0:99:47:47:1718:0:0:0,-10,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:88.1378:18:18:675:0:0:0,-5.41854,-10 0/0:52.0144:6:6:228:0:0:0,-1.80618,-10 0/0:64.0556:10:10:346:0:0:0,-3.0103,-10 0/0:52.0144:6:6:211:0:0:0,-1.80618,-10 0/0:99:40:40:1362:0:0:0,-10,-10 0/0:99:60:60:2165:0:0:0,-10,-10 0/0:99:49:49:1794:0:0:0,-10,-10 0/0:99:46:45:1659:0:0:0,-10,-10 0/1:99:27:10:358:17:631:-10,0,-10 0/0:67.0659:11:11:389:0:0:0,-3.31133,-10 0/0:99:29:29:993:0:0:0,-8.72987,-10 0/0:99:51:51:1838:0:0:0,-10,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/0:99:42:42:1521:0:0:0,-10,-10 0/0:67.0659:11:11:417:0:0:0,-3.31133,-10 0/0:99:36:36:1338:0:0:0,-10,-10 0/0:99:23:23:834:0:0:0,-6.92369,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:99:35:35:1234:0:0:0,-10,-10 0/0:94.1552:20:20:710:0:0:0,-6.0206,-10 0/0:99:22:22:801:0:0:0,-6.62266,-10 0/0:99:58:57:2077:0:0:0,-10,-10 0/0:79.1071:15:15:553:0:0:0,-4.51545,-10 0/0:49.0041:5:5:189:0:0:0,-1.50515,-10 0/0:74.8622:22:21:769:1:14:0,-3.88024,-10 0/0:94.1552:20:20:743:0:0:0,-6.0206,-10 0/0:99:29:29:1077:0:0:0,-8.72987,-10 0/0:61.0453:9:9:340:0:0:0,-2.70927,-10 0/0:70.0762:12:12:416:0:0:0,-3.61236,-10 0/0:99:41:41:1485:0:0:0,-10,-10 0/0:99:26:26:986:0:0:0,-7.82678,-10 0/0:99:29:29:1094:0:0:0,-8.72987,-10 0/0:99:47:47:1682:0:0:0,-10,-10 0/0:88.1378:18:18:679:0:0:0,-5.41854,-10 0/0:99:31:31:1125:0:0:0,-9.33193,-10 0/0:99:39:39:1372:0:0:0,-10,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:76.0968:14:14:530:0:0:0,-4.21442,-10 0/0:99:62:62:2224:0:0:0,-10,-10 0/0:99:35:35:1275:0:0:0,-10,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:99:43:43:1532:0:0:0,-10,-10 0/0:91.1479:19:19:698:0:0:0,-5.71957,-10 0/0:99:57:57:2069:0:0:0,-10,-10 0/0:99:27:27:979:0:0:0,-8.12781,-10 0/0:49.0041:5:5:189:0:0:0,-1.50515,-10 0/0:99:57:57:2090:0:0:0,-10,-10 0/0:97.162:21:21:743:0:0:0,-6.32163,-10 0/0:99:34:34:1154:0:0:0,-10,-10 0/0:67.0659:11:11:409:0:0:0,-3.31133,-10 0/0:94.1552:20:20:690:0:0:0,-6.0206,-10 0/0:85.1276:17:17:619:0:0:0,-5.11751,-10 0/0:99:42:42:1564:0:0:0,-10,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/0:99:37:37:1369:0:0:0,-10,-10 0/0:99:26:26:896:0:0:0,-7.82678,-10 0/0:99:27:27:1009:0:0:0,-8.12781,-10 0/0:99:49:49:1776:0:0:0,-10,-10 0/0:99:23:23:840:0:0:0,-6.92369,-10 0/0:97.162:21:21:796:0:0:0,-6.32163,-10 0/0:99:39:39:1415:0:0:0,-10,-10 0/0:67.0659:11:11:408:0:0:0,-3.31133,-10 0/0:99:27:27:1015:0:0:0,-8.12781,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:99:29:29:1016:0:0:0,-8.72987,-10 0/0:91.1479:19:19:698:0:0:0,-5.71957,-10 0/0:99:45:45:1644:0:0:0,-10,-10 0/0:91.1479:19:19:655:0:0:0,-5.71957,-10 0/0:94.1552:20:20:755:0:0:0,-6.0206,-10 0/0:85.1276:17:17:586:0:0:0,-5.11751,-10 0/0:58.035:8:8:300:0:0:0,-2.40824,-10 0/0:70.0762:12:12:453:0:0:0,-3.61236,-10 0/0:99:45:45:1625:0:0:0,-10,-10 0/0:99:40:40:1448:0:0:0,-10,-10 0/0:99:35:35:1238:0:0:0,-10,-10 0/0:99:25:25:919:0:0:0,-7.52575,-10 0/0:94.1552:20:20:731:0:0:0,-6.0206,-10 0/0:43.7592:11:10:354:1:15:0,-0.769937,-10 0/0:99:32:32:1176:0:0:0,-9.63296,-10 0/0:70.0762:12:12:448:0:0:0,-3.61236,-10 0/0:82.1174:16:16:600:0:0:0,-4.81648,-10 0/0:94.1552:20:20:755:0:0:0,-6.0206,-10 0/0:99:44:44:1604:0:0:0,-10,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 scaffold_120 1523465 . G C 2094.79 . AB=0.556604;ABP=5.96022;AC=6;AF=0.0326087;AN=184;AO=83;CIGAR=1X;DP=2235;DPB=2235;DPRA=1.366;EPP=3.24576;EPPR=18.2833;GTI=1;LEN=1;MEANALT=1.14286;MQM=59.759;MQMR=59.861;NS=92;NUMALT=1;ODDS=4.82132;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2944;QR=76057;RO=2151;RPP=183.243;RPPR=4665.17;RUN=1;SAF=40;SAP=3.24576;SAR=43;SRF=1013;SRP=18.784;SRR=1138;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:63.2902:16:16:547:0:0:0,-4.81648,-10 0/1:0.0129872:9:0:0:8:263:-10,-2.40824,0 0/0:99:28:28:991:0:0:0,-8.42884,-10 0/0:45.2284:10:10:364:0:0:0,-3.0103,-10 0/0:54.2593:13:13:416:0:0:0,-3.91339,-10 0/0:57.2696:14:14:529:0:0:0,-4.21442,-10 0/0:99:56:56:2000:0:0:0,-10,-10 0/0:81.3519:22:22:792:0:0:0,-6.62266,-10 0/0:48.2387:11:11:404:0:0:0,-3.31133,-10 0/0:33.1872:6:6:204:0:0:0,-1.80618,-10 0/0:39.2078:8:8:237:0:0:0,-2.40824,-10 0/0:27.1666:4:4:147:0:0:0,-1.20412,-10 0/0:99:40:40:1452:0:0:0,-10,-10 0/0:99:39:39:1408:0:0:0,-10,-10 0/0:99:33:33:1171:0:0:0,-9.93399,-10 0/0:87.3724:24:24:872:0:0:0,-7.22472,-10 0/0:87.3724:24:24:883:0:0:0,-7.22472,-10 0/0:51.249:12:12:401:0:0:0,-3.61236,-10 0/0:99:36:36:1272:0:0:0,-10,-10 0/0:99:51:51:1835:0:0:0,-10,-10 0/0:99:37:37:1212:0:0:0,-10,-10 0/0:99:57:57:2004:0:0:0,-10,-10 0/0:45.2284:10:10:353:0:0:0,-3.0103,-10 0/0:99:37:37:1338:0:0:0,-10,-10 0/0:69.3108:18:18:586:0:0:0,-5.41854,-10 0/0:99:33:33:1166:0:0:0,-9.93399,-10 0/0:60.2799:15:15:505:0:0:0,-4.51545,-10 0/0:63.2902:16:16:579:0:0:0,-4.81648,-10 0/0:75.3314:20:20:712:0:0:0,-6.0206,-10 0/0:99:48:48:1656:0:0:0,-10,-10 0/0:33.1872:6:6:220:0:0:0,-1.80618,-10 0/0:39.2078:8:8:288:0:0:0,-2.40824,-10 0/0:99:34:34:1204:0:0:0,-10,-10 0/0:42.2181:9:9:299:0:0:0,-2.70927,-10 0/0:96.4023:27:27:947:0:0:0,-8.12781,-10 0/0:45.2284:10:10:364:0:0:0,-3.0103,-10 0/0:36.1975:7:7:256:0:0:0,-2.10721,-10 0/0:99:32:32:1157:0:0:0,-9.63296,-10 0/0:63.2902:16:16:581:0:0:0,-4.81648,-10 0/0:99:31:31:1086:0:0:0,-9.33193,-10 0/0:99:43:43:1536:0:0:0,-10,-10 0/0:96.4023:27:27:955:0:0:0,-8.12781,-10 0/0:90.3826:25:25:926:0:0:0,-7.52575,-10 0/0:99:58:58:2057:0:0:0,-10,-10 0/0:75.3314:20:20:688:0:0:0,-6.0206,-10 0/0:60.2799:15:15:545:0:0:0,-4.51545,-10 0/0:99:56:56:2005:0:0:0,-10,-10 0/0:96.4023:27:27:907:0:0:0,-8.12781,-10 0/0:60.2799:15:15:518:0:0:0,-4.51545,-10 0/0:99:41:41:1427:0:0:0,-10,-10 0/0:54.2593:13:13:452:0:0:0,-3.91339,-10 0/0:99:37:37:1271:0:0:0,-10,-10 0/0:69.3108:18:18:651:0:0:0,-5.41854,-10 0/0:48.2387:11:11:397:0:0:0,-3.31133,-10 0/0:99:55:55:1948:0:0:0,-10,-10 0/0:57.2696:14:14:512:0:0:0,-4.21442,-10 0/0:90.3826:25:25:924:0:0:0,-7.52575,-10 0/0:36.1975:7:7:217:0:0:0,-2.10721,-10 0/0:99:32:32:1138:0:0:0,-9.63296,-10 0/0:54.2593:13:13:491:0:0:0,-3.91339,-10 0/0:99:38:38:1396:0:0:0,-10,-10 0/0:78.3417:21:21:736:0:0:0,-6.32163,-10 0/0:99:49:48:1645:1:16:0,-10,-10 0/0:63.2902:16:16:571:0:0:0,-4.81648,-10 0/0:54.2593:13:13:467:0:0:0,-3.91339,-10 0/0:93.3926:26:26:922:0:0:0,-7.82678,-10 0/0:81.3519:22:22:813:0:0:0,-6.62266,-10 0/0:57.2696:14:14:472:0:0:0,-4.21442,-10 0/0:99:47:47:1684:0:0:0,-10,-10 0/0:60.2799:15:15:522:0:0:0,-4.51545,-10 0/0:87.3724:24:24:864:0:0:0,-7.22472,-10 0/0:99:32:32:1116:0:0:0,-9.63296,-10 0/0:99:31:31:1085:0:0:0,-9.33193,-10 0/0:84.3622:23:23:814:0:0:0,-6.92369,-10 0/0:96.4023:27:27:940:0:0:0,-8.12781,-10 0/0:72.3211:19:19:679:0:0:0,-5.71957,-10 0/0:60.2799:15:15:504:0:0:0,-4.51545,-10 1/1:21.0306:22:0:0:22:799:-10,-6.62266,0 0/0:33.1872:6:6:218:0:0:0,-1.80618,-10 0/0:66.3005:17:17:624:0:0:0,-5.11751,-10 0/0:99:49:48:1723:1:37:0,-9.36027,-10 0/1:99:38:16:520:22:806:-10,0,-10 0/1:99:21:12:429:9:320:-10,0,-10 0/1:99:38:18:662:20:703:-10,0,-10 0/0:99:29:29:984:0:0:0,-8.72987,-10 0/0:24.1563:3:3:68:0:0:0,-0.90309,-6.34667 0/0:84.3622:23:23:830:0:0:0,-6.92369,-10 0/0:54.2593:13:13:441:0:0:0,-3.91339,-10 0/0:27.1666:4:4:143:0:0:0,-1.20412,-10 0/0:54.2593:13:13:480:0:0:0,-3.91339,-10 0/0:78.3417:21:21:748:0:0:0,-6.32163,-10 0/0:96.4023:27:27:954:0:0:0,-8.12781,-10 scaffold_120 1838951 . T G 47716.1 . AB=0.59375;ABP=5.45321;AC=182;AF=0.98913;AN=184;AO=1627;CIGAR=1X;DP=1661;DPB=1661;DPRA=9.11538;EPP=16.625;EPPR=3.26577;GTI=4;LEN=1;MEANALT=1;MQM=53.6054;MQMR=55.0882;NS=92;NUMALT=1;ODDS=1.18239;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=58638;QR=1063;RO=34;RPP=3466.85;RPPR=76.8404;RUN=1;SAF=856;SAP=12.6531;SAR=771;SRF=16;SRP=3.26577;SRR=18;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:82.2747:14:0:0:14:516:-10,-4.21442,0 1/1:61.2026:7:0:0:7:230:-10,-2.10721,0 1/1:99:24:0:0:24:852:-10,-7.22472,0 1/1:67.2232:9:0:0:9:306:-10,-2.70927,0 1/1:58.1923:6:0:0:6:217:-10,-1.80618,0 1/1:67.2232:9:0:0:9:335:-10,-2.70927,0 1/1:99:36:0:0:36:1326:-10,-10,0 1/1:79.2644:13:0:0:13:494:-10,-3.91339,0 1/1:79.2644:13:0:0:13:451:-10,-3.91339,0 1/1:64.2129:8:0:0:8:304:-10,-2.40824,0 1/1:58.1923:6:0:0:6:202:-10,-1.80618,0 1/1:1.04459e-08:2:2:43:0:0:0,-0.60206,-4.085 1/1:99:30:0:0:30:1077:-10,-9.0309,0 1/1:99:39:0:0:39:1413:-10,-10,0 1/1:97.3192:19:0:0:19:686:-10,-5.71957,0 1/1:99:38:0:0:38:1331:-10,-10,0 1/1:94.3124:18:0:0:18:627:-10,-5.41854,0 1/1:61.2026:7:0:0:7:261:-10,-2.10721,0 1/1:99:23:0:0:23:815:-10,-6.92369,0 1/1:99:39:1:14:38:1411:-10,-8.74911,0 1/1:73.5237:20:1:14:19:693:-10,-3.31957,0 1/1:60.7731:24:1:38:23:868:-10,-2.04451,0 1/1:58.1923:6:0:0:6:199:-10,-1.80618,0 1/1:97.3192:19:0:0:19:708:-10,-5.71957,0 1/1:85.2849:15:0:0:15:559:-10,-4.51545,0 1/1:62.4516:16:1:14:15:523:-10,-2.21236,0 1/1:76.2541:12:0:0:12:417:-10,-3.61236,0 1/1:82.2747:14:0:0:14:517:-10,-4.21442,0 1/1:73.2438:11:0:0:11:410:-10,-3.31133,0 1/1:99:39:1:38:38:1388:-10,-6.34911,0 1/1:46.1511:2:0:0:2:76:-7.22,-0.60206,0 0/1:12.6188:11:2:65:9:298:-10,0,-4.60403 1/1:99:23:0:0:23:852:-10,-6.92369,0 1/1:76.2541:12:0:0:12:430:-10,-3.61236,0 1/1:79.2644:13:0:0:13:464:-10,-3.91339,0 1/1:55.182:5:0:0:5:190:-10,-1.50515,0 1/1:76.2541:12:0:0:12:454:-10,-3.61236,0 1/1:99:25:0:0:25:867:-10,-7.52575,0 1/1:49.5237:20:1:38:19:652:-10,-0.91957,0 1/1:79.2644:13:0:0:13:482:-10,-3.91339,0 1/1:99:20:0:0:20:747:-10,-6.0206,0 1/1:82.2747:14:0:0:14:497:-10,-4.21442,0 1/1:56.1205:18:1:27:17:631:-10,-1.46327,0 1/1:99:33:0:0:33:1179:-10,-9.93399,0 1/1:85.2849:15:0:0:15:541:-10,-4.51545,0 1/1:94.3124:18:0:0:18:647:-10,-5.41854,0 1/1:99:49:1:38:48:1711:-10,-9.26027,0 1/1:97.3192:19:0:0:19:687:-10,-5.71957,0 1/1:0.0104613:11:1:38:10:322:-10,0,-1.53006 1/1:99:32:0:0:32:1153:-10,-9.63296,0 1/1:64.2129:8:0:0:8:292:-10,-2.40824,0 1/1:99:43:0:0:43:1537:-10,-10,0 1/1:88.2945:16:0:0:16:556:-10,-4.81648,0 1/1:67.2232:9:0:0:9:341:-10,-2.70927,0 1/1:99:38:0:0:38:1405:-10,-10,0 1/1:74.3221:21:1:16:20:727:-10,-3.39941,0 1/1:69.6059:26:1:36:25:878:-10,-2.81181,0 1/1:52.1717:4:0:0:4:150:-10,-1.20412,0 1/1:53.4819:21:1:38:20:697:-10,-1.19941,0 1/1:58.1923:6:0:0:6:214:-10,-1.80618,0 1/1:94.144:28:1:16:27:989:-10,-5.38168,0 1/1:99:22:0:0:22:794:-10,-6.62266,0 1/1:99:32:0:0:32:1114:-10,-9.63296,0 1/1:60.7731:24:1:38:23:815:-10,-2.04451,0 1/1:0.000890608:15:1:38:14:519:-10,0,-0.460641 1/1:72.1448:28:1:38:27:908:-10,-3.18168,0 1/1:0.000474968:16:1:38:15:554:-10,0,-0.18764 1/1:61.2026:7:0:0:7:233:-10,-2.10721,0 1/1:99:31:0:0:31:1070:-10,-9.33193,0 1/1:67.2232:9:0:0:9:329:-10,-2.70927,0 1/1:99:20:0:0:20:703:-10,-6.0206,0 1/1:99:29:0:0:29:1073:-10,-8.72987,0 1/1:99:21:0:0:21:730:-10,-6.32163,0 1/1:88.2945:16:0:0:16:583:-10,-4.81648,0 1/1:99:20:0:0:20:752:-10,-6.0206,0 1/1:70.2335:10:0:0:10:354:-10,-3.0103,0 1/1:82.2747:14:0:0:14:521:-10,-4.21442,0 1/1:79.2644:13:0:0:13:470:-10,-3.91339,0 1/1:52.1717:4:0:0:4:145:-10,-1.20412,0 1/1:76.2541:12:0:0:12:410:-10,-3.61236,0 1/1:99:35:0:0:35:1290:-10,-10,0 1/1:99:30:0:0:30:1097:-10,-9.0309,0 0/1:99:21:11:390:10:370:-10,0,-10 1/1:91.3039:17:0:0:17:624:-10,-5.11751,0 1/1:63.1075:23:1:34:22:824:-10,-2.16196,0 1/1:55.182:5:0:0:5:163:-10,-1.50515,0 1/1:55.182:5:0:0:5:190:-10,-1.50515,0 1/1:76.2541:12:0:0:12:423:-10,-3.61236,0 1/1:49.1614:3:0:0:3:104:-9.70667,-0.90309,0 1/1:85.2849:15:0:0:15:534:-10,-4.51545,0 1/1:54.3225:13:1:14:12:456:-10,-1.39945,0 1/1:94.3124:18:0:0:18:684:-10,-5.41854,0 scaffold_120 2331689 . G A 3892.9 . AB=0.544715;ABP=5.14646;AC=17;AF=0.0923913;AN=184;AO=149;CIGAR=1X;DP=1721;DPB=1721;DPRA=1.04247;EPP=3.02487;EPPR=3.02274;GTI=3;LEN=1;MEANALT=1;MQM=59.7919;MQMR=59.9656;NS=92;NUMALT=1;ODDS=2.0104;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5437;QR=57798;RO=1571;RPP=326.56;RPPR=3234.43;RUN=1;SAF=75;SAP=3.02487;SAR=74;SRF=763;SRP=5.8093;SRR=808;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.0142432:7:0:0:7:265:-10,-2.10721,0 0/0:20.9397:3:3:110:0:0:0,-0.90309,-10 1/1:10.4914:14:0:0:14:501:-10,-4.21442,0 1/1:10.4914:14:0:0:14:519:-10,-4.21442,0 0/0:42.0118:10:10:347:0:0:0,-3.0103,-10 0/0:32.9809:7:7:266:0:0:0,-2.10721,-10 0/0:99:48:48:1815:0:0:0,-10,-10 1/1:28.5532:20:0:0:20:738:-10,-6.0206,0 0/1:45.0076:12:10:373:2:72:-5.04718,0,-10 0/0:20.9397:3:3:114:0:0:0,-0.90309,-10 0/0:45.0221:11:11:416:0:0:0,-3.31133,-10 0/1:0.0285333:8:0:0:8:279:-10,-2.40824,0 0/0:81.1456:23:23:813:0:0:0,-6.92369,-10 0/1:99:29:15:566:14:508:-10,0,-10 0/0:84.1558:24:24:910:0:0:0,-7.22472,-10 0/0:72.1148:20:20:721:0:0:0,-6.0206,-10 0/0:93.1853:27:27:1012:0:0:0,-8.12781,-10 0/0:54.053:14:14:515:0:0:0,-4.21442,-10 0/0:99:32:32:1143:0:0:0,-9.63296,-10 0/0:87.1659:25:25:878:0:0:0,-7.52575,-10 0/0:60.0736:16:16:580:0:0:0,-4.81648,-10 0/0:81.1456:23:23:836:0:0:0,-6.92369,-10 0/0:26.9603:5:5:189:0:0:0,-1.50515,-10 0/0:39.0015:9:9:335:0:0:0,-2.70927,-10 0/0:93.1853:27:27:973:0:0:0,-8.12781,-10 0/0:99:33:33:1251:0:0:0,-9.93399,-10 0/0:54.053:14:14:517:0:0:0,-4.21442,-10 0/0:57.0633:15:15:545:0:0:0,-4.51545,-10 0/0:90.1768:26:26:947:0:0:0,-7.82678,-10 0/0:99:48:47:1766:1:16:0,-10,-10 0/0:26.9603:5:5:185:0:0:0,-1.50515,-10 0/0:51.0427:13:13:470:0:0:0,-3.91339,-10 0/0:32.9809:7:7:264:0:0:0,-2.10721,-10 0/0:26.9603:5:5:190:0:0:0,-1.50515,-10 0/0:87.1659:25:25:949:0:0:0,-7.52575,-10 0/0:26.9603:5:5:185:0:0:0,-1.50515,-10 0/0:26.9603:5:5:159:0:0:0,-1.50515,-10 0/0:78.1354:22:22:787:0:0:0,-6.62266,-10 0/1:0.115275:10:0:0:10:377:-10,-3.0103,0 0/0:48.0324:12:12:445:0:0:0,-3.61236,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:81.1456:23:23:836:0:0:0,-6.92369,-10 1/1:22.5326:18:0:0:18:663:-10,-5.41854,0 0/0:99:37:37:1390:0:0:0,-10,-10 0/1:99:30:14:520:16:582:-10,0,-10 0/0:54.053:14:14:515:0:0:0,-4.21442,-10 0/0:99:44:43:1605:0:0:0,-10,-10 0/0:75.1251:21:21:740:0:0:0,-6.32163,-10 0/0:60.0736:16:16:594:0:0:0,-4.81648,-10 0/0:99:54:54:1982:0:0:0,-10,-10 0/0:35.9912:8:8:289:0:0:0,-2.40824,-10 0/0:99:38:38:1429:0:0:0,-10,-10 0/0:39.0015:9:9:336:0:0:0,-2.70927,-10 0/0:23.95:4:4:150:0:0:0,-1.20412,-10 0/0:99:37:37:1324:0:0:0,-10,-10 0/0:45.0221:11:11:389:0:0:0,-3.31133,-10 0/0:78.1354:22:22:816:0:0:0,-6.62266,-10 0/0:32.9809:7:7:242:0:0:0,-2.10721,-10 0/0:78.1354:22:22:813:0:0:0,-6.62266,-10 0/0:57.0633:15:15:547:0:0:0,-4.51545,-10 0/0:87.1659:25:25:938:0:0:0,-7.52575,-10 1/1:13.5017:15:0:0:15:563:-10,-4.51545,0 0/0:99:35:35:1267:0:0:0,-10,-10 0/0:69.1045:19:19:719:0:0:0,-5.71957,-10 0/0:45.0221:11:11:395:0:0:0,-3.31133,-10 0/0:96.194:28:28:1034:0:0:0,-8.42884,-10 0/0:69.1045:19:19:668:0:0:0,-5.71957,-10 0/0:42.0118:10:10:372:0:0:0,-3.0103,-10 0/1:99:27:17:595:10:354:-10,0,-10 0/0:51.0427:13:13:466:0:0:0,-3.91339,-10 0/0:66.0942:18:18:668:0:0:0,-5.41854,-10 0/0:99:35:35:1316:0:0:0,-10,-10 0/0:78.1354:22:22:785:0:0:0,-6.62266,-10 0/0:51.0427:13:13:468:0:0:0,-3.91339,-10 0/0:84.1558:24:24:908:0:0:0,-7.22472,-10 0/0:54.053:14:14:508:0:0:0,-4.21442,-10 0/0:63.0839:17:17:637:0:0:0,-5.11751,-10 0/0:54.053:14:14:515:0:0:0,-4.21442,-10 0/0:26.9603:5:5:166:0:0:0,-1.50515,-10 0/0:39.0015:9:9:339:0:0:0,-2.70927,-10 0/0:99:33:33:1248:0:0:0,-9.93399,-10 0/0:69.1045:19:19:693:0:0:0,-5.71957,-10 0/0:63.0839:17:17:640:0:0:0,-5.11751,-10 0/0:90.1768:26:26:961:0:0:0,-7.82678,-10 0/0:99:33:33:1192:0:0:0,-9.93399,-10 0/0:14.9191:1:1:38:0:0:0,-0.30103,-3.8 0/0:72.1148:20:20:732:0:0:0,-6.0206,-10 0/0:51.0427:13:13:490:0:0:0,-3.91339,-10 0/0:42.0118:10:10:378:0:0:0,-3.0103,-10 0/0:57.0633:15:15:539:0:0:0,-4.51545,-10 0/0:45.0221:11:11:418:0:0:0,-3.31133,-10 0/0:51.0427:13:13:489:0:0:0,-3.91339,-10 scaffold_120 2420135 . A C 219.8 . AB=0.416667;ABP=4.45795;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=2249;DPB=2249;DPRA=0.981573;EPP=3.0103;EPPR=5.15843;GTI=0;LEN=1;MEANALT=1;MQM=50.5;MQMR=55.2794;NS=92;NUMALT=1;ODDS=12.5986;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=356;QR=82635;RO=2233;RPP=24.725;RPPR=4791.3;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=1147;SRP=6.62877;SRR=1086;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:75.787:9:9:317:0:0:0,-2.70927,-10 0/0:63.7459:5:5:168:0:0:0,-1.50515,-10 0/0:99:25:25:899:0:0:0,-7.52575,-10 0/0:72.7768:8:8:304:0:0:0,-2.40824,-10 0/0:99:26:26:987:0:0:0,-7.82678,-10 0/0:81.8076:11:11:411:0:0:0,-3.31133,-10 0/0:99:57:57:2138:0:0:0,-10,-10 0/0:99:31:30:1111:0:0:0,-9.0309,-10 0/0:99:17:17:638:0:0:0,-5.11751,-10 0/0:75.787:9:9:339:0:0:0,-2.70927,-10 0/0:60.7356:4:4:151:0:0:0,-1.20412,-10 0/0:81.8076:11:11:417:0:0:0,-3.31133,-10 0/0:99:36:36:1224:0:0:0,-10,-10 0/0:99:57:57:2133:0:0:0,-10,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:99:25:25:937:0:0:0,-7.52575,-10 0/0:99:25:25:944:0:0:0,-7.52575,-10 0/0:84.8176:12:12:456:0:0:0,-3.61236,-10 0/0:99:36:36:1338:0:0:0,-10,-10 0/0:99:62:62:2279:0:0:0,-10,-10 0/0:99:17:17:614:0:0:0,-5.11751,-10 0/0:99:43:43:1606:0:0:0,-10,-10 0/0:75.787:9:9:342:0:0:0,-2.70927,-10 0/0:99:26:25:930:0:0:0,-7.52575,-10 0/0:99:24:24:901:0:0:0,-7.22472,-10 0/0:99:31:31:1136:0:0:0,-9.33193,-10 0/0:99:17:17:609:0:0:0,-5.11751,-10 0/0:99:20:20:753:0:0:0,-6.0206,-10 0/0:99:23:23:855:0:0:0,-6.92369,-10 0/0:99:49:49:1784:0:0:0,-10,-10 0/0:72.7768:8:8:294:0:0:0,-2.40824,-10 0/0:57.7253:3:3:114:0:0:0,-0.90309,-10 0/0:99:25:25:920:0:0:0,-7.52575,-10 0/0:87.8281:13:13:455:0:0:0,-3.91339,-10 0/0:99:19:19:713:0:0:0,-5.71957,-10 0/0:75.787:9:9:315:0:0:0,-2.70927,-10 0/0:72.7768:8:8:279:0:0:0,-2.40824,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:99:25:25:924:0:0:0,-7.52575,-10 0/0:96.8578:16:16:540:0:0:0,-4.81648,-10 0/0:99:36:36:1338:0:0:0,-10,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:99:20:20:748:0:0:0,-6.0206,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:99:29:29:1091:0:0:0,-8.72987,-10 0/0:99:17:17:636:0:0:0,-5.11751,-10 0/0:99:81:81:3005:0:0:0,-10,-10 0/0:99:51:51:1898:0:0:0,-10,-10 0/0:99:23:23:840:0:0:0,-6.92369,-10 0/0:99:50:49:1812:0:0:0,-10,-10 0/0:90.8382:14:14:528:0:0:0,-4.21442,-10 0/0:99:42:42:1524:0:0:0,-10,-10 0/0:96.8578:16:16:595:0:0:0,-4.81648,-10 0/0:72.7768:8:8:301:0:0:0,-2.40824,-10 0/0:99:48:48:1793:0:0:0,-10,-10 0/0:99:18:18:681:0:0:0,-5.41854,-10 0/0:99:25:25:947:0:0:0,-7.52575,-10 0/0:66.7562:6:6:206:0:0:0,-1.80618,-10 0/0:99:17:17:593:0:0:0,-5.11751,-10 0/0:96.8578:16:16:599:0:0:0,-4.81648,-10 0/0:99:44:44:1638:0:0:0,-10,-10 0/0:99:23:23:856:0:0:0,-6.92369,-10 0/0:99:38:38:1427:0:0:0,-10,-10 0/0:99:20:20:743:0:0:0,-6.0206,-10 0/0:99:17:17:635:0:0:0,-5.11751,-10 0/0:99:47:47:1765:0:0:0,-10,-10 0/0:99:21:21:790:0:0:0,-6.32163,-10 0/0:87.8281:13:13:493:0:0:0,-3.91339,-10 0/0:99:56:56:2059:0:0:0,-10,-10 0/0:99:19:18:647:0:0:0,-5.41854,-10 0/0:99:26:26:971:0:0:0,-7.82678,-10 0/0:99:38:38:1415:0:0:0,-10,-10 0/1:99:24:14:510:10:356:-10,0,-10 0/0:99:20:20:757:0:0:0,-6.0206,-10 0/0:99:46:46:1684:0:0:0,-10,-10 0/0:93.8482:15:15:557:0:0:0,-4.51545,-10 0/0:93.8482:15:15:567:0:0:0,-4.51545,-10 0/0:99:21:21:785:0:0:0,-6.32163,-10 0/0:72.7768:8:8:299:0:0:0,-2.40824,-10 0/0:84.8176:12:12:456:0:0:0,-3.61236,-10 0/0:99:42:41:1522:0:0:0,-10,-10 0/0:99:31:31:1111:0:0:0,-9.33193,-10 0/0:99:36:36:1341:0:0:0,-10,-10 0/0:99:18:18:674:0:0:0,-5.41854,-10 0/0:99:25:25:948:0:0:0,-7.52575,-10 0/0:60.7356:4:4:152:0:0:0,-1.20412,-10 0/0:99:21:21:774:0:0:0,-6.32163,-10 0/0:99:18:18:683:0:0:0,-5.41854,-10 0/0:54.715:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:20:20:727:0:0:0,-6.0206,-10 0/0:99:17:17:635:0:0:0,-5.11751,-10 0/0:99:18:17:642:0:0:0,-5.11751,-10 scaffold_120 2501892 . C G 51844.3 . AB=0;ABP=0;AC=180;AF=0.978261;AN=184;AO=1737;CIGAR=1X;DP=1790;DPB=1790;DPRA=0.67377;EPP=3.02155;EPPR=3.17734;GTI=2;LEN=1;MEANALT=1.01124;MQM=28.4041;MQMR=42.9231;NS=92;NUMALT=1;ODDS=3.14417;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63340;QR=1801;RO=52;RPP=3766.18;RPPR=115.927;RUN=1;SAF=866;SAP=3.04155;SAR=871;SRF=25;SRP=3.17734;SRR=27;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:42.0815:11:0:0:11:356:-10,-3.31133,0 1/1:45.0918:12:0:0:12:446:-10,-3.61236,0 1/1:69.1742:20:0:0:20:724:-10,-6.0206,0 0/1:0.176332:15:15:564:0:0:0,-4.51545,-10 1/1:66.1639:19:0:0:19:681:-10,-5.71957,0 1/1:30.0403:7:0:0:7:232:-10,-2.10721,0 1/1:99:43:0:0:43:1563:-10,-10,0 1/1:84.2255:25:0:0:25:906:-10,-7.52575,0 1/1:48.1021:13:0:0:13:487:-10,-3.91339,0 1/1:21.0094:4:0:0:4:152:-10,-1.20412,0 1/1:39.0712:10:0:0:10:345:-10,-3.0103,0 1/1:36.0609:9:0:0:9:315:-10,-2.70927,0 1/1:99:39:0:0:39:1443:-10,-10,0 1/1:87.2355:26:0:0:26:941:-10,-7.82678,0 1/1:99:30:0:0:30:1084:-10,-9.0309,0 1/1:99:39:0:0:39:1441:-10,-10,0 1/1:87.2355:26:0:0:26:975:-10,-7.82678,0 1/1:42.0815:11:0:0:11:418:-10,-3.31133,0 1/1:75.1948:22:0:0:22:829:-10,-6.62266,0 1/1:99:31:0:0:31:1095:-10,-9.33193,0 1/1:54.1227:15:0:0:15:515:-10,-4.51545,0 1/1:93.2565:28:0:0:28:986:-10,-8.42884,0 1/1:39.0712:10:0:0:10:379:-10,-3.0103,0 1/1:69.1742:20:0:0:20:732:-10,-6.0206,0 1/1:54.1227:15:0:0:15:533:-10,-4.51545,0 1/1:93.2565:28:0:0:28:1040:-10,-8.42884,0 1/1:45.0918:12:0:0:12:439:-10,-3.61236,0 1/1:66.1639:19:0:0:19:706:-10,-5.71957,0 1/1:57.133:16:0:0:16:580:-10,-4.81648,0 1/1:75.1948:22:0:0:22:829:-10,-6.62266,0 1/1:36.0609:9:0:0:9:318:-10,-2.70927,0 1/1:42.0815:11:0:0:11:418:-10,-3.31133,0 1/1:54.1227:15:0:0:15:557:-10,-4.51545,0 1/1:39.0712:10:0:0:10:358:-10,-3.0103,0 1/1:81.2153:24:0:0:24:884:-10,-7.22472,0 1/1:39.0712:10:0:0:10:377:-10,-3.0103,0 1/1:72.1845:21:0:0:21:745:-10,-6.32163,0 1/1:99:33:0:0:33:1192:-10,-9.93399,0 1/1:51.1124:14:0:0:14:486:-10,-4.21442,0 1/1:54.1227:15:0:0:15:570:-10,-4.51545,0 1/1:99:33:0:0:33:1200:-10,-9.93399,0 1/1:78.2051:23:0:0:23:802:-10,-6.92369,0 1/1:75.1948:22:0:0:22:762:-10,-6.62266,0 1/1:96.2668:29:0:0:29:1071:-10,-8.72987,0 1/1:99:33:0:0:33:1212:-10,-9.93399,0 1/1:75.1948:22:0:0:22:813:-10,-6.62266,0 1/1:99:42:0:0:42:1541:-10,-10,0 1/1:60.1433:17:0:0:17:631:-10,-5.11751,0 1/1:33.0506:8:0:0:8:291:-10,-2.40824,0 1/1:75.1948:22:0:0:22:834:-10,-6.62266,0 1/1:42.0815:11:0:0:11:409:-10,-3.31133,0 1/1:90.2463:27:0:0:27:980:-10,-8.12781,0 1/1:63.1536:18:0:0:18:672:-10,-5.41854,0 1/1:21.0094:4:0:0:4:147:-10,-1.20412,0 1/1:99:42:0:0:42:1511:-10,-10,0 1/1:54.1227:15:0:0:15:554:-10,-4.51545,0 1/1:48.1021:13:0:0:13:458:-10,-3.91339,0 1/1:17.9991:3:0:0:3:112:-10,-0.90309,0 1/1:42.0815:11:0:0:11:409:-10,-3.31133,0 1/1:45.0918:12:0:0:12:450:-10,-3.61236,0 1/1:87.8495:35:1:14:34:1235:-10,-7.59198,0 1/1:87.2355:26:0:0:26:955:-10,-7.82678,0 1/1:99:36:0:0:36:1263:-10,-10,0 1/1:54.1227:15:0:0:15:478:-10,-4.51545,0 1/1:36.0609:9:0:0:9:331:-10,-2.70927,0 1/1:99:31:0:0:31:1121:-10,-9.33193,0 1/1:72.1845:21:0:0:21:798:-10,-6.32163,0 1/1:30.0403:7:0:0:7:242:-10,-2.10721,0 1/1:99:32:0:0:32:1187:-10,-9.63296,0 1/1:48.1021:13:0:0:13:474:-10,-3.91339,0 1/1:75.1948:22:0:0:22:775:-10,-6.62266,0 1/1:69.1742:20:0:0:20:701:-10,-6.0206,0 1/1:72.1845:21:0:0:21:767:-10,-6.32163,0 1/1:60.1433:17:0:0:17:630:-10,-5.11751,0 1/1:99:37:0:0:37:1379:-10,-10,0 1/1:42.0815:11:0:0:11:417:-10,-3.31133,0 1/1:39.0712:10:0:0:10:364:-10,-3.0103,0 1/1:57.133:17:0:0:16:577:-10,-4.81648,0 0/1:0.000675052:7:7:222:0:0:0,-2.10721,-10 1/1:36.0609:9:0:0:9:337:-10,-2.70927,0 0/0:44.322:29:29:1001:0:0:0,-8.72987,-10 1/1:78.2051:23:0:0:23:862:-10,-6.92369,0 1/1:99:34:0:0:34:1256:-10,-10,0 1/1:66.1639:19:0:0:19:706:-10,-5.71957,0 1/1:57.133:16:0:0:16:591:-10,-4.81648,0 1/1:33.0506:8:0:0:8:293:-10,-2.40824,0 1/1:72.1845:21:0:0:21:746:-10,-6.32163,0 1/1:60.1433:17:0:0:17:640:-10,-5.11751,0 1/1:45.0918:12:0:0:12:442:-10,-3.61236,0 1/1:75.1948:22:0:0:22:826:-10,-6.62266,0 1/1:54.1227:15:0:0:15:560:-10,-4.51545,0 1/1:45.0918:12:0:0:12:451:-10,-3.61236,0 scaffold_120 2501940 . T C 60438.7 . AB=0.75;ABP=131.127;AC=178;AF=0.956989;AN=186;AO=2046;CIGAR=1X;DP=2133;DPB=2133;DPRA=0;EPP=6.5806;EPPR=3.03585;GTI=6;LEN=1;MEANALT=1.02151;MQM=20.002;MQMR=30.4235;NS=93;NUMALT=1;ODDS=0.74928;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75010;QR=2931;RO=85;RPP=4445.84;RPPR=14.2764;RUN=1;SAF=994;SAP=6.5806;SAR=1052;SRF=38;SRP=5.07959;SRR=47;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:42.2826:8:1:15:7:250:-10,-0.00514998,0 0/1:37.0604:5:2:69:3:114:-10,0,-6.04985 1/1:99:20:0:0:20:754:-10,-6.0206,0 1/1:89.1885:14:0:0:14:514:-10,-4.21442,0 1/1:77.1473:10:0:0:10:331:-10,-3.0103,0 1/1:62.0959:6:0:0:5:188:-10,-1.50515,0 1/1:99:58:0:0:58:2115:-10,-10,0 1/1:99:19:0:0:19:704:-10,-5.71957,0 1/1:98.2187:17:0:0:17:632:-10,-5.11751,0 1/1:59.0856:4:0:0:4:147:-10,-1.20412,0 1/1:68.1165:7:0:0:7:239:-10,-2.10721,0 1/1:62.0959:5:0:0:5:190:-10,-1.50515,0 1/1:69.9786:44:2:76:42:1540:-10,-3.04943,0 1/1:99:40:0:0:40:1430:-10,-10,0 1/1:94.148:35:1:38:34:1234:-10,-5.19198,0 0/1:99:27:5:190:22:815:-10,0,-10 1/1:66.3642:25:1:38:24:903:-10,-2.32781,0 1/1:65.1062:6:0:0:6:228:-10,-1.80618,0 1/1:99:21:0:0:21:723:-10,-6.32163,0 1/1:99:40:0:0:40:1411:-10,-10,0 1/1:99:24:0:0:24:909:-10,-7.22472,0 1/1:99:30:0:0:30:1119:-10,-9.0309,0 1/1:83.1678:12:0:0:12:452:-10,-3.61236,0 1/1:99:27:0:0:27:1015:-10,-8.12781,0 1/1:99:29:0:0:29:1073:-10,-8.72987,0 1/1:99:27:0:0:27:985:-10,-8.12781,0 1/1:43.9567:17:1:38:16:573:-10,-0.087061,0 1/1:99:19:0:0:19:720:-10,-5.71957,0 1/1:99:19:0:0:19:711:-10,-5.71957,0 1/1:99:42:0:0:42:1522:-10,-10,0 1/1:56.0753:3:0:0:3:114:-10,-0.90309,0 1/1:0.00147174:3:1:16:2:76:-6.79403,0,-1.17403 1/1:99:21:0:0:21:791:-10,-6.32163,0 1/1:86.1778:13:0:0:13:493:-10,-3.91339,0 1/1:99:25:0:0:25:938:-10,-7.52575,0 1/1:0.016039:10:1:38:9:332:-10,0,-1.7897 1/1:99:19:0:0:19:668:-10,-5.71957,0 1/1:99:32:0:0:32:1166:-10,-9.63296,0 1/1:99:22:0:0:22:819:-10,-6.62266,0 1/1:99:19:0:0:19:706:-10,-5.71957,0 1/1:99:31:1:16:30:1093:-10,-6.24057,0 1/1:99:39:1:16:38:1432:-10,-8.54911,0 1/1:99:23:0:0:23:863:-10,-6.92369,0 1/1:99:43:0:0:43:1596:-10,-10,0 1/1:99:29:0:0:29:1066:-10,-8.72987,0 0/1:24.8174:23:3:92:20:739:-10,0,-4.9112 1/1:99:57:1:16:56:2074:-10,-10,0 1/1:55.9852:29:2:54:27:1019:-10,-0.991344,0 0/1:5.3081:14:2:54:12:438:-10,0,-2.87462 1/1:99:39:0:0:39:1449:-10,-10,0 1/1:71.1268:8:0:0:8:280:-10,-2.40824,0 0/1:99:72:20:741:52:1918:-10,0,-10 1/1:0.00144966:21:2:54:19:710:-10,0,-1.13059 1/1:83.1678:12:0:0:12:422:-10,-3.61236,0 1/1:99:58:1:38:57:2076:-10,-10,0 1/1:98.2187:17:0:0:17:605:-10,-5.11751,0 1/1:99:30:0:0:30:1085:-10,-9.0309,0 1/1:53.065:2:0:0:2:72:-6.84,-0.60206,0 1/1:99:19:0:0:19:697:-10,-5.71957,0 1/1:0.00213713:13:1:38:12:455:-10,0,-1.00055 1/1:0.0336068:34:3:87:31:1125:-10,0,-1.66197 1/1:99:18:0:0:18:675:-10,-5.41854,0 1/1:99:56:0:0:56:1979:-10,-10,0 1/1:60.7057:23:1:38:22:795:-10,-1.76196,0 1/1:99:23:0:0:23:816:-10,-6.92369,0 1/1:99:38:1:38:36:1328:-10,-6.03991,0 1/1:89.1885:14:0:0:14:505:-10,-4.21442,0 1/1:80.1576:11:0:0:11:415:-10,-3.31133,0 1/1:99:39:0:0:39:1436:-10,-10,0 1/1:74.1371:9:0:0:9:338:-10,-2.70927,0 1/1:72.5586:26:1:38:25:892:-10,-2.61181,0 1/1:99:35:0:0:35:1288:-10,-10,0 1/1:99:21:0:0:21:786:-10,-6.32163,0 1/1:99:24:0:0:24:893:-10,-7.22472,0 1/1:99:34:0:0:34:1274:-10,-10,0 1/1:77.1473:10:0:0:10:378:-10,-3.0103,0 1/1:74.1371:9:0:0:9:316:-10,-2.70927,0 1/1:0.29682:18:2:62:16:602:-10,0,-2.65615 1/1:77.1473:10:0:0:10:355:-10,-3.0103,0 1/1:99:20:0:0:20:677:-10,-6.0206,0 0/1:99:57:21:766:36:1286:-10,0,-10 1/1:99:26:0:0:26:960:-10,-7.82678,0 1/1:99:29:0:0:29:1081:-10,-8.72987,0 1/1:99:18:0:0:18:674:-10,-5.41854,0 1/1:99:18:0:0:18:647:-10,-5.41854,0 1/1:65.1062:6:0:0:6:226:-10,-1.80618,0 1/1:92.1987:15:0:0:15:563:-10,-4.51545,0 1/1:58.4347:21:1:38:20:704:-10,-1.19941,0 1/1:71.1268:8:0:0:8:303:-10,-2.40824,0 0/1:45.3507:23:3:114:20:709:-10,0,-6.96453 0/1:68.1368:15:3:113:12:442:-10,0,-8.68923 1/1:99:21:0:0:21:771:-10,-6.32163,0 scaffold_120 2501941 . GC G 97.0132 . AB=0.190476;ABP=37.9607;AC=2;AF=0.0107527;AN=186;AO=31;CIGAR=1M1D1M;DP=2132;DPB=2122;DPRA=1.14996;EPP=4.76149;EPPR=7.37702;GTI=6;LEN=1;MEANALT=1;MQM=44.5161;MQMR=20.0581;NS=93;NUMALT=1;ODDS=1.2405;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=7;PQR=7;PRO=0.5;QA=1121;QR=76726;RO=2101;RPP=70.3259;RPPR=4565.27;RUN=1;SAF=13;SAP=4.76149;SAR=18;SRF=1018;SRP=7.37702;SRR=1083;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:63.6824:8:7:244:1:15:0,-0.00514998,-10 0|0:1.09441:5:3:113:2:63:-5.47985,0,-10 0|0:99:20:20:725:0:0:0,-6.0206,-10 0|0:99:14:14:519:0:0:0,-4.21442,-10 0|0:95.5846:10:10:348:0:0:0,-3.0103,-10 0|0:83.5437:6:6:211:0:0:0,-1.80618,-10 0|0:99:58:58:2118:0:0:0,-10,-10 0|0:99:19:19:656:0:0:0,-5.71957,-10 0|0:99:17:17:612:0:0:0,-5.11751,-10 0|0:77.5232:4:4:147:0:0:0,-1.20412,-10 0|0:86.5536:7:7:226:0:0:0,-2.10721,-10 0|0:80.5334:5:5:186:0:0:0,-1.50515,-10 0|0:93.3958:44:42:1532:2:76:0,-3.04943,-10 0|0:99:40:40:1486:0:0:0,-10,-10 0|0:99:35:34:1238:1:38:0,-5.19198,-10 0|1:86.9911:27:22:799:5:188:-10,0,-10 0|0:86.9085:25:24:896:1:38:0,-2.32781,-10 0|0:83.5437:6:6:227:0:0:0,-1.80618,-10 0|0:99:21:21:712:0:0:0,-6.32163,-10 0|0:99:40:40:1443:0:0:0,-10,-10 0|0:99:24:24:883:0:0:0,-7.22472,-10 0|0:99:30:30:1095:0:0:0,-9.0309,-10 0|0:99:12:12:449:0:0:0,-3.61236,-10 0|0:99:27:27:1001:0:0:0,-8.12781,-10 0|0:99:29:29:1029:0:0:0,-8.72987,-10 0|0:99:27:27:976:0:0:0,-8.12781,-10 0|0:64.5015:17:16:586:1:38:0,-0.087061,-10 0|0:99:19:19:717:0:0:0,-5.71957,-10 0|0:99:19:19:710:0:0:0,-5.71957,-10 0|0:99:42:42:1536:0:0:0,-10,-10 0|0:74.5128:3:3:114:0:0:0,-0.90309,-10 0|0:74.5128:3:3:101:0:0:0,-0.90309,-9.42667 0|0:99:21:21:778:0:0:0,-6.32163,-10 0|0:99:13:13:489:0:0:0,-3.91339,-10 0|0:99:25:25:943:0:0:0,-7.52575,-10 0|0:0.000115984:10:9:325:1:38:-1.7897,0,-10 0|0:99:19:19:679:0:0:0,-5.71957,-10 0|0:99:32:32:1170:0:0:0,-9.63296,-10 0|0:99:22:22:802:0:0:0,-6.62266,-10 0|0:99:19:19:714:0:0:0,-5.71957,-10 0|0:99:31:31:1113:0:0:0,-9.33193,-10 0|0:99:39:39:1446:0:0:0,-10,-10 0|0:99:23:23:845:0:0:0,-6.92369,-10 0|0:99:43:43:1582:0:0:0,-10,-10 0|0:99:29:29:1088:0:0:0,-8.72987,-10 0|0:0.00111399:23:21:754:2:76:-2.69943,0,-10 0|0:99:57:57:2067:0:0:0,-10,-10 0|0:99:29:29:1078:0:0:0,-8.72987,-10 0|0:0.0267125:14:12:440:2:65:-3.91962,0,-10 0|0:99:39:39:1406:0:0:0,-10,-10 0|0:89.5634:8:8:282:0:0:0,-2.40824,-10 0|0:99:72:72:2633:0:0:0,-10,-10 0|0:99:21:21:758:0:0:0,-6.32163,-10 0|0:99:12:12:417:0:0:0,-3.61236,-10 0|0:99:58:57:2079:1:38:0,-10,-10 0|0:99:17:17:614:0:0:0,-5.11751,-10 0|0:99:30:30:1080:0:0:0,-9.0309,-10 0|0:71.5026:2:2:69:0:0:0,-0.60206,-6.555 0|0:99:19:19:697:0:0:0,-5.71957,-10 0|0:1.88472e-05:13:12:436:1:38:-1.00055,0,-10 0|0:64.9308:34:32:1168:2:75:0,-0.361057,-10 0|0:99:18:18:647:0:0:0,-5.41854,-10 0|0:99:56:56:2060:0:0:0,-10,-10 0|0:81.2505:23:22:788:1:38:0,-1.76196,-10 0|0:99:23:23:819:0:0:0,-6.92369,-10 0|0:99:38:37:1366:1:38:0,-6.05936,-10 0|0:99:14:14:509:0:0:0,-4.21442,-10 0|0:98.5945:11:11:412:0:0:0,-3.31133,-10 0|0:99:39:39:1436:0:0:0,-10,-10 0|0:92.5727:9:9:339:0:0:0,-2.70927,-10 0|0:99:26:26:965:0:0:0,-7.82678,-10 0|0:99:35:35:1298:0:0:0,-10,-10 0|0:99:21:21:789:0:0:0,-6.32163,-10 0|0:99:24:24:885:0:0:0,-7.22472,-10 0|0:99:34:34:1260:0:0:0,-10,-10 0|0:95.5846:10:10:379:0:0:0,-3.0103,-10 0|0:92.5727:9:9:318:0:0:0,-2.70927,-10 0|0:64.5015:17:16:587:1:38:0,-0.087061,-10 0|0:95.5846:10:10:361:0:0:0,-3.0103,-10 0|0:99:20:20:726:0:0:0,-6.0206,-10 0|0:99:57:56:2060:1:38:0,-10,-10 0|0:99:26:26:929:0:0:0,-7.82678,-10 0|0:99:29:29:1065:0:0:0,-8.72987,-10 0|0:99:18:18:644:0:0:0,-5.41854,-10 0|0:99:18:18:634:0:0:0,-5.41854,-10 0|0:83.5437:6:6:226:0:0:0,-1.80618,-10 0|0:99:15:15:562:0:0:0,-4.51545,-10 0|0:99:21:21:775:0:0:0,-6.32163,-10 0|0:89.5634:8:8:304:0:0:0,-2.40824,-10 0|0:0.000373117:23:21:778:2:71:-2.22443,0,-10 0|1:32.1912:15:12:444:3:112:-8.59589,0,-10 0|0:99:21:21:741:0:0:0,-6.32163,-10 scaffold_120 2501945 . C A 100.945 . AB=0.190476;ABP=37.9607;AC=2;AF=0.0107527;AN=186;AO=30;CIGAR=1X;DP=2132;DPB=2132;DPRA=1.20415;EPP=5.61607;EPPR=7.51027;GTI=6;LEN=1;MEANALT=1;MQM=44.5333;MQMR=20.0695;NS=93;NUMALT=1;ODDS=1.245;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1125;QR=75680;RO=2102;RPP=68.1545;RPPR=4558.76;RUN=1;SAF=12;SAP=5.61607;SAR=18;SRF=1019;SRP=7.24168;SRR=1083;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:89.8431:8:8:241:0:0:0,-2.40824,-10 0/0:1.01876:5:3:114:2:63:-5.47985,0,-10 0/0:99:20:20:727:0:0:0,-6.0206,-10 0/0:99:14:14:523:0:0:0,-4.21442,-10 0/0:95.863:10:10:340:0:0:0,-3.0103,-10 0/0:83.8226:6:6:219:0:0:0,-1.80618,-10 0/0:99:58:58:2081:0:0:0,-10,-10 0/0:99:19:19:671:0:0:0,-5.71957,-10 0/0:99:17:17:599:0:0:0,-5.11751,-10 0/0:77.8021:4:4:146:0:0:0,-1.20412,-10 0/0:86.8329:7:7:214:0:0:0,-2.10721,-10 0/0:80.8123:5:5:160:0:0:0,-1.50515,-10 0/0:93.6725:44:42:1507:2:76:0,-3.04943,-10 0/0:99:40:40:1426:0:0:0,-10,-10 0/0:99:35:34:1255:1:38:0,-5.19198,-10 0/1:89.2259:27:22:776:5:190:-10,0,-10 0/0:87.1858:25:24:856:1:38:0,-2.32781,-10 0/0:83.8226:6:6:228:0:0:0,-1.80618,-10 0/0:99:21:21:724:0:0:0,-6.32163,-10 0/0:99:40:40:1430:0:0:0,-10,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:99:12:12:440:0:0:0,-3.61236,-10 0/0:99:27:27:988:0:0:0,-8.12781,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:99:27:27:904:0:0:0,-8.12781,-10 0/0:64.7784:17:16:566:1:38:0,-0.087061,-10 0/0:99:19:19:687:0:0:0,-5.71957,-10 0/0:99:19:19:705:0:0:0,-5.71957,-10 0/0:99:42:42:1535:0:0:0,-10,-10 0/0:74.7917:3:3:113:0:0:0,-0.90309,-10 0/0:74.7917:3:3:109:0:0:0,-0.90309,-10 0/0:99:21:21:745:0:0:0,-6.32163,-10 0/0:99:13:13:484:0:0:0,-3.91339,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:0.000108821:10:9:323:1:38:-1.7897,0,-10 0/0:99:19:19:674:0:0:0,-5.71957,-10 0/0:99:32:32:1148:0:0:0,-9.63296,-10 0/0:99:22:22:809:0:0:0,-6.62266,-10 0/0:99:19:19:684:0:0:0,-5.71957,-10 0/0:99:31:31:1109:0:0:0,-9.33193,-10 0/0:99:39:39:1454:0:0:0,-10,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:99:43:43:1574:0:0:0,-10,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:0.00104568:23:21:741:2:76:-2.69943,0,-10 0/0:99:57:57:2020:0:0:0,-10,-10 0/0:99:29:29:1031:0:0:0,-8.72987,-10 0/0:0.286515:14:12:443:2:76:-4.96462,0,-10 0/0:99:39:39:1338:0:0:0,-10,-10 0/0:89.8431:8:8:299:0:0:0,-2.40824,-10 0/0:99:72:72:2580:0:0:0,-10,-10 0/0:99:21:21:784:0:0:0,-6.32163,-10 0/0:99:12:12:425:0:0:0,-3.61236,-10 0/0:99:58:57:2035:1:38:0,-10,-10 0/0:99:17:17:610:0:0:0,-5.11751,-10 0/0:99:30:30:1040:0:0:0,-9.0309,-10 0/0:71.7815:2:2:71:0:0:0,-0.60206,-6.745 0/0:99:19:19:682:0:0:0,-5.71957,-10 0/0:1.76832e-05:13:12:452:1:38:-1.00055,0,-10 0/0:64.2556:34:32:1143:2:76:0,-0.266057,-10 0/0:99:18:18:670:0:0:0,-5.41854,-10 0/0:99:56:56:2056:0:0:0,-10,-10 0/0:83.5274:23:22:818:1:36:0,-1.96196,-10 0/0:99:23:23:802:0:0:0,-6.92369,-10 0/0:99:38:37:1371:1:38:0,-6.05936,-10 0/0:99:14:14:523:0:0:0,-4.21442,-10 0/0:98.8725:11:11:415:0:0:0,-3.31133,-10 0/0:99:39:39:1458:0:0:0,-10,-10 0/0:92.8531:9:9:331:0:0:0,-2.70927,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:99:35:35:1285:0:0:0,-10,-10 0/0:99:21:21:773:0:0:0,-6.32163,-10 0/0:99:24:24:868:0:0:0,-7.22472,-10 0/0:99:34:34:1236:0:0:0,-10,-10 0/0:95.863:10:10:368:0:0:0,-3.0103,-10 0/0:92.8531:9:9:310:0:0:0,-2.70927,-10 0/0:64.7784:17:16:605:1:38:0,-0.087061,-10 0/0:95.863:10:10:355:0:0:0,-3.0103,-10 0/0:99:20:20:693:0:0:0,-6.0206,-10 0/0:99:57:56:1993:1:38:0,-10,-10 0/0:99:26:26:893:0:0:0,-7.82678,-10 0/0:99:29:29:1033:0:0:0,-8.72987,-10 0/0:99:18:18:608:0:0:0,-5.41854,-10 0/0:99:18:18:640:0:0:0,-5.41854,-10 0/0:83.8226:6:6:227:0:0:0,-1.80618,-10 0/0:99:15:15:559:0:0:0,-4.51545,-10 0/0:99:21:21:750:0:0:0,-6.32163,-10 0/0:89.8431:8:8:297:0:0:0,-2.40824,-10 0/0:0.00104568:23:21:732:2:76:-2.69943,0,-10 0/1:34.2957:15:12:454:3:114:-8.78256,0,-10 0/0:99:21:21:740:0:0:0,-6.32163,-10 scaffold_120 2598947 . G A 4181.06 . AB=0.506977;ABP=3.1012;AC=12;AF=0.0652174;AN=184;AO=156;CIGAR=1X;DP=2256;DPB=2256;DPRA=1.2127;EPP=3.0103;EPPR=12.9412;GTI=1;LEN=1;MEANALT=1;MQM=58.609;MQMR=59.7824;NS=92;NUMALT=1;ODDS=2.02386;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5700;QR=77036;RO=2100;RPP=341.76;RPPR=4563.1;RUN=1;SAF=78;SAP=3.0103;SAR=78;SRF=1099;SRP=12.9412;SRR=1001;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:66.2533:17:17:633:0:0:0,-5.11751,-10 0/1:0.0350963:9:0:0:9:340:-10,-2.70927,0 0/0:87.325:24:24:872:0:0:0,-7.22472,-10 1/1:19.026:17:0:0:17:645:-10,-5.11751,0 0/0:60.2327:15:15:540:0:0:0,-4.51545,-10 0/0:57.2224:14:14:520:0:0:0,-4.21442,-10 0/0:99:46:46:1717:0:0:0,-10,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:75.2842:20:20:729:0:0:0,-6.0206,-10 0/0:30.1297:5:5:188:0:0:0,-1.50515,-10 0/0:27.1194:4:4:130:0:0:0,-1.20412,-10 0/0:36.1503:7:7:239:0:0:0,-2.10721,-10 0/1:99:40:26:965:14:505:-10,0,-10 0/0:99:33:33:1243:0:0:0,-9.93399,-10 0/0:99:28:28:1010:0:0:0,-8.42884,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:87.325:24:24:890:0:0:0,-7.22472,-10 0/0:63.243:16:16:604:0:0:0,-4.81648,-10 0/0:87.325:24:24:855:0:0:0,-7.22472,-10 0/0:99:48:48:1682:0:0:0,-10,-10 0/0:66.2533:17:17:630:0:0:0,-5.11751,-10 0/0:99:48:48:1783:0:0:0,-10,-10 0/0:36.1503:7:7:262:0:0:0,-2.10721,-10 0/0:93.3446:26:26:938:0:0:0,-7.82678,-10 0/0:99:40:40:1431:0:0:0,-10,-10 0/0:99:37:37:1336:0:0:0,-10,-10 0/0:69.2636:18:18:667:0:0:0,-5.41854,-10 0/0:72.2739:19:19:685:0:0:0,-5.71957,-10 0/0:69.2636:18:18:681:0:0:0,-5.41854,-10 0/0:99:54:54:1940:0:0:0,-10,-10 0/0:39.1606:8:8:290:0:0:0,-2.40824,-10 0/0:51.2018:12:12:430:0:0:0,-3.61236,-10 0/0:99:29:29:1069:0:0:0,-8.72987,-10 0/0:54.2121:13:13:469:0:0:0,-3.91339,-10 0/0:75.2842:20:20:751:0:0:0,-6.0206,-10 0/0:63.243:16:16:601:0:0:0,-4.81648,-10 0/0:39.1606:8:8:288:0:0:0,-2.40824,-10 0/0:99:34:34:1250:0:0:0,-10,-10 0/0:69.2636:18:18:643:0:0:0,-5.41854,-10 0/0:66.2533:17:17:631:0:0:0,-5.11751,-10 0/0:99:43:43:1581:0:0:0,-10,-10 0/0:81.3047:22:22:836:0:0:0,-6.62266,-10 0/0:90.3361:25:25:920:0:0:0,-7.52575,-10 0/0:99:30:30:1064:0:0:0,-9.0309,-10 0/0:78.2945:21:21:768:0:0:0,-6.32163,-10 0/0:66.2533:17:17:641:0:0:0,-5.11751,-10 0/0:99:50:50:1885:0:0:0,-10,-10 0/0:96.3535:27:27:1012:0:0:0,-8.12781,-10 0/0:69.2636:18:18:616:0:0:0,-5.41854,-10 0/0:99:42:42:1555:0:0:0,-10,-10 0/0:93.3446:26:26:969:0:0:0,-7.82678,-10 0/0:99:48:48:1790:0:0:0,-10,-10 0/0:57.2224:14:14:529:0:0:0,-4.21442,-10 0/0:48.1915:11:11:409:0:0:0,-3.31133,-10 0/0:99:61:61:2299:0:0:0,-10,-10 0/0:75.2842:20:20:707:0:0:0,-6.0206,-10 0/0:75.2842:20:20:731:0:0:0,-6.0206,-10 0/0:39.1606:8:8:302:0:0:0,-2.40824,-10 0/0:78.2945:21:21:777:0:0:0,-6.32163,-10 0/0:72.2739:19:19:700:0:0:0,-5.71957,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:84.3149:23:23:855:0:0:0,-6.92369,-10 0/0:99:48:48:1764:0:0:0,-10,-10 0/0:99:32:32:1211:0:0:0,-9.63296,-10 0/0:18.8956:17:16:568:1:38:0,-0.087061,-10 0/1:99:40:17:630:23:839:-10,0,-10 0/0:93.3446:26:26:901:0:0:0,-7.82678,-10 0/0:42.1709:9:9:342:0:0:0,-2.70927,-10 0/1:99:52:30:1104:22:795:-10,0,-10 1/1:9.99513:14:0:0:14:483:-10,-4.21442,0 0/0:99:34:34:1238:0:0:0,-10,-10 0/0:99:37:37:1382:0:0:0,-10,-10 0/0:90.3361:25:25:938:0:0:0,-7.52575,-10 0/0:72.2739:19:19:694:0:0:0,-5.71957,-10 0/0:99:35:35:1294:0:0:0,-10,-10 1/1:9.99513:14:0:0:14:530:-10,-4.21442,0 0/0:81.3047:22:22:810:0:0:0,-6.62266,-10 0/0:54.2121:13:13:485:0:0:0,-3.91339,-10 0/0:51.2018:12:12:441:0:0:0,-3.61236,-10 0/0:60.2327:15:15:560:0:0:0,-4.51545,-10 0/0:90.2254:42:41:1389:1:38:0,-7.22001,-10 0/1:99:32:12:452:20:727:-10,0,-10 0/0:84.3149:23:23:852:0:0:0,-6.92369,-10 0/0:99:30:30:1098:0:0:0,-9.0309,-10 0/1:99:42:21:770:21:760:-10,0,-10 0/0:30.1297:5:5:187:0:0:0,-1.50515,-10 0/0:81.3047:22:22:807:0:0:0,-6.62266,-10 0/0:84.3149:23:23:829:0:0:0,-6.92369,-10 0/0:24.1091:3:3:110:0:0:0,-0.90309,-10 0/0:78.2945:21:21:783:0:0:0,-6.32163,-10 0/0:66.2533:17:17:622:0:0:0,-5.11751,-10 0/0:66.2533:17:17:598:0:0:0,-5.11751,-10 scaffold_120 2598994 . G A 2442.27 . AB=0.532934;ABP=4.58364;AC=5;AF=0.0271739;AN=184;AO=92;CIGAR=1X;DP=2255;DPB=2255;DPRA=1.30334;EPP=3.10471;EPPR=9.76376;GTI=0;LEN=1;MEANALT=1;MQM=59.4674;MQMR=59.7248;NS=92;NUMALT=1;ODDS=2.28705;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3352;QR=78457;RO=2162;RPP=202.786;RPPR=4697.73;RUN=1;SAF=45;SAP=3.10471;SAR=47;SRF=1122;SRP=9.76376;SRR=1040;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.9934:17:17:614:0:0:0,-5.11751,-10 0/0:28.911:9:9:339:0:0:0,-2.70927,-10 0/0:74.0655:24:24:863:0:0:0,-7.22472,-10 0/0:52.9934:17:17:622:0:0:0,-5.11751,-10 0/0:46.9728:15:15:538:0:0:0,-4.51545,-10 0/0:43.9625:14:14:522:0:0:0,-4.21442,-10 0/0:99:46:46:1669:0:0:0,-10,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:23.9077:20:19:705:1:29:0,-1.81957,-10 0/0:16.8698:5:5:160:0:0:0,-1.50515,-10 0/0:13.8595:4:4:120:0:0:0,-1.20412,-10 0/0:22.8904:7:7:237:0:0:0,-2.10721,-10 0/0:72.2943:40:39:1409:1:38:0,-6.63914,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:86.1064:28:28:952:0:0:0,-8.42884,-10 0/0:95.135:31:31:1144:0:0:0,-9.33193,-10 0/0:74.0655:24:24:877:0:0:0,-7.22472,-10 0/0:49.9831:16:16:588:0:0:0,-4.81648,-10 0/0:74.0655:24:24:864:0:0:0,-7.22472,-10 0/1:99:49:19:691:30:1107:-10,0,-10 0/0:52.9934:17:17:611:0:0:0,-5.11751,-10 0/0:99:48:48:1749:0:0:0,-10,-10 0/0:22.8904:7:7:259:0:0:0,-2.10721,-10 0/0:80.086:26:26:924:0:0:0,-7.82678,-10 0/0:99:41:41:1441:0:0:0,-10,-10 0/0:99:36:36:1299:0:0:0,-10,-10 0/0:56.0037:18:18:679:0:0:0,-5.41854,-10 0/0:59.014:19:19:704:0:0:0,-5.71957,-10 0/0:56.0037:18:18:672:0:0:0,-5.41854,-10 0/0:99:54:54:1976:0:0:0,-10,-10 0/0:25.9007:8:8:292:0:0:0,-2.40824,-10 0/0:37.9419:12:12:430:0:0:0,-3.61236,-10 0/0:89.1163:29:29:1080:0:0:0,-8.72987,-10 0/0:40.9522:13:13:494:0:0:0,-3.91339,-10 0/0:62.0243:20:20:734:0:0:0,-6.0206,-10 0/0:49.9831:16:16:571:0:0:0,-4.81648,-10 0/0:25.9007:8:8:276:0:0:0,-2.40824,-10 0/1:99:33:12:450:21:765:-10,0,-10 0/0:56.0037:18:18:667:0:0:0,-5.41854,-10 0/0:52.9934:17:17:639:0:0:0,-5.11751,-10 0/0:99:44:44:1562:0:0:0,-10,-10 0/0:68.0449:22:22:820:0:0:0,-6.62266,-10 0/0:77.0757:25:25:894:0:0:0,-7.52575,-10 0/0:86.1064:28:28:912:0:0:0,-8.42884,-10 0/0:65.0346:21:21:750:0:0:0,-6.32163,-10 0/0:56.0037:18:18:645:0:0:0,-5.41854,-10 0/0:99:51:51:1838:0:0:0,-10,-10 0/0:86.1064:28:28:1053:0:0:0,-8.42884,-10 0/0:56.0037:18:18:630:0:0:0,-5.41854,-10 0/0:99:43:43:1619:0:0:0,-10,-10 0/0:77.0757:25:25:919:0:0:0,-7.52575,-10 0/0:99:48:47:1694:0:0:0,-10,-10 0/0:43.9625:14:14:504:0:0:0,-4.21442,-10 0/0:34.9316:11:11:410:0:0:0,-3.31133,-10 0/0:99:61:61:2279:0:0:0,-10,-10 0/0:62.0243:20:20:730:0:0:0,-6.0206,-10 0/0:62.0243:20:20:713:0:0:0,-6.0206,-10 0/0:25.9007:8:8:301:0:0:0,-2.40824,-10 0/0:65.0346:21:21:792:0:0:0,-6.32163,-10 0/0:59.014:19:19:716:0:0:0,-5.71957,-10 0/0:99:34:34:1221:0:0:0,-10,-10 0/0:71.0552:23:23:821:0:0:0,-6.92369,-10 0/0:99:48:48:1771:0:0:0,-10,-10 0/0:98.1492:32:32:1125:0:0:0,-9.63296,-10 0/0:52.9934:17:17:612:0:0:0,-5.11751,-10 0/0:99:40:40:1483:0:0:0,-10,-10 0/0:80.086:26:26:917:0:0:0,-7.82678,-10 0/0:28.911:9:9:341:0:0:0,-2.70927,-10 0/0:99:51:51:1879:0:0:0,-10,-10 0/0:40.9522:13:13:466:0:0:0,-3.91339,-10 0/0:99:34:34:1200:0:0:0,-10,-10 0/0:99:37:37:1327:0:0:0,-10,-10 0/0:77.0757:25:25:918:0:0:0,-7.52575,-10 0/0:59.014:19:19:690:0:0:0,-5.71957,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:43.9625:14:14:515:0:0:0,-4.21442,-10 0/0:42.7053:22:21:742:1:16:0,-3.68024,-10 0/0:40.9522:13:13:488:0:0:0,-3.91339,-10 0/0:37.9419:12:12:430:0:0:0,-3.61236,-10 0/0:46.9728:15:15:551:0:0:0,-4.51545,-10 0/0:99:42:42:1558:0:0:0,-10,-10 0/1:99:32:20:733:12:455:-10,0,-10 0/1:99:23:10:331:13:453:-10,0,-10 0/1:99:30:17:611:13:489:-10,0,-10 0/0:99:42:42:1476:0:0:0,-10,-10 0/0:16.8698:5:5:188:0:0:0,-1.50515,-10 0/0:65.0346:21:21:753:0:0:0,-6.32163,-10 0/0:71.0552:23:23:864:0:0:0,-6.92369,-10 0/0:10.8492:3:3:114:0:0:0,-0.90309,-10 0/0:65.0346:21:21:723:0:0:0,-6.32163,-10 0/0:52.9934:17:17:615:0:0:0,-5.11751,-10 0/0:56.0037:18:18:666:0:0:0,-5.41854,-10 scaffold_120 2614866 . G A 2496.45 . AB=1;ABP=44.2683;AC=6;AF=0.0326087;AN=184;AO=95;CIGAR=1X;DP=2566;DPB=2566;DPRA=0.845811;EPP=3.21602;EPPR=3.26427;GTI=2;LEN=1;MEANALT=1;MQM=59.8105;MQMR=59.8519;NS=92;NUMALT=1;ODDS=3.88119;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3416;QR=90182;RO=2471;RPP=200.706;RPPR=5342.69;RUN=1;SAF=50;SAP=3.58174;SAR=45;SRF=1230;SRP=3.11663;SRR=1241;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.0469:22:22:794:0:0:0,-6.62266,-10 0/0:39.9337:11:11:417:0:0:0,-3.31133,-10 0/0:88.0982:27:27:1019:0:0:0,-8.12781,-10 0/0:64.0161:19:19:711:0:0:0,-5.71957,-10 0/0:57.9955:17:17:635:0:0:0,-5.11751,-10 0/0:48.9646:14:14:512:0:0:0,-4.21442,-10 0/0:99:59:59:2163:0:0:0,-10,-10 1/1:96.2252:46:0:0:46:1631:-10,-10,0 0/0:88.0982:27:27:947:0:0:0,-8.12781,-10 0/1:4.24085e-05:4:0:0:4:152:-10,-1.20412,0 0/1:0.0877323:15:0:0:15:559:-10,-4.51545,0 0/0:30.9028:8:8:303:0:0:0,-2.40824,-10 0/0:99:48:48:1707:0:0:0,-10,-10 1/1:48.0622:30:0:0:30:1074:-10,-9.0309,0 0/0:99:39:39:1428:0:0:0,-10,-10 0/0:85.088:26:26:921:0:0:0,-7.82678,-10 0/0:99:32:32:1150:0:0:0,-9.63296,-10 0/0:48.9646:14:14:529:0:0:0,-4.21442,-10 0/0:99:35:35:1260:0:0:0,-10,-10 0/0:99:55:55:2081:0:0:0,-10,-10 0/0:79.0675:24:24:800:0:0:0,-7.22472,-10 0/0:99:47:47:1719:0:0:0,-10,-10 0/0:42.944:12:12:431:0:0:0,-3.61236,-10 0/0:99:31:31:1132:0:0:0,-9.33193,-10 0/0:94.118:29:29:1074:0:0:0,-8.72987,-10 0/0:99:31:31:1170:0:0:0,-9.33193,-10 0/0:99:32:32:1188:0:0:0,-9.63296,-10 0/0:64.0161:19:19:651:0:0:0,-5.71957,-10 0/0:97.1272:30:30:1127:0:0:0,-9.0309,-10 0/0:99:46:46:1677:0:0:0,-10,-10 0/0:30.9028:8:8:295:0:0:0,-2.40824,-10 0/0:27.8925:7:7:256:0:0:0,-2.10721,-10 0/0:82.0778:25:25:933:0:0:0,-7.52575,-10 0/0:39.9337:11:11:395:0:0:0,-3.31133,-10 0/0:70.0367:21:21:789:0:0:0,-6.32163,-10 0/0:61.0058:18:18:676:0:0:0,-5.41854,-10 0/0:42.944:12:12:439:0:0:0,-3.61236,-10 0/0:99:40:40:1490:0:0:0,-10,-10 0/0:91.1082:28:28:1037:0:0:0,-8.42884,-10 0/0:64.0161:19:19:675:0:0:0,-5.71957,-10 0/0:99:46:46:1727:0:0:0,-10,-10 0/0:67.0264:20:20:732:0:0:0,-6.0206,-10 0/0:99:35:35:1298:0:0:0,-10,-10 0/0:99:46:46:1712:0:0:0,-10,-10 0/0:99:39:39:1441:0:0:0,-10,-10 0/0:76.0572:23:23:849:0:0:0,-6.92369,-10 0/0:99:79:79:2912:0:0:0,-10,-10 0/0:94.118:29:29:1097:0:0:0,-8.72987,-10 0/0:64.0161:19:19:714:0:0:0,-5.71957,-10 0/0:99:48:48:1704:0:0:0,-10,-10 0/0:88.0982:27:27:963:0:0:0,-8.12781,-10 0/0:99:41:41:1473:0:0:0,-10,-10 0/0:85.088:26:26:971:0:0:0,-7.82678,-10 0/0:42.944:12:12:456:0:0:0,-3.61236,-10 0/0:99:69:69:2550:0:0:0,-10,-10 0/0:82.0778:25:25:919:0:0:0,-7.52575,-10 0/0:97.1272:30:30:1106:0:0:0,-9.0309,-10 0/0:48.9646:14:14:507:0:0:0,-4.21442,-10 0/0:97.1272:30:30:1116:0:0:0,-9.0309,-10 0/0:42.944:12:12:413:0:0:0,-3.61236,-10 0/0:99:39:39:1445:0:0:0,-10,-10 0/0:82.0778:25:25:930:0:0:0,-7.52575,-10 0/0:99:51:51:1881:0:0:0,-10,-10 0/0:99:34:34:1176:0:0:0,-10,-10 0/0:39.9337:11:11:416:0:0:0,-3.31133,-10 0/0:99:39:39:1363:0:0:0,-10,-10 0/0:73.0469:22:22:751:0:0:0,-6.62266,-10 0/0:54.9852:16:16:572:0:0:0,-4.81648,-10 0/0:99:49:49:1728:0:0:0,-10,-10 0/0:61.0058:18:18:633:0:0:0,-5.41854,-10 0/0:97.1272:30:30:1113:0:0:0,-9.0309,-10 0/0:99:37:37:1346:0:0:0,-10,-10 0/0:88.0982:27:27:934:0:0:0,-8.12781,-10 0/0:73.0469:22:22:823:0:0:0,-6.62266,-10 0/0:99:45:45:1649:0:0:0,-10,-10 0/0:70.0367:21:21:750:0:0:0,-6.32163,-10 0/0:67.0264:20:20:720:0:0:0,-6.0206,-10 0/0:73.0469:22:22:812:0:0:0,-6.62266,-10 0/0:27.8925:7:7:253:0:0:0,-2.10721,-10 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/0:99:43:43:1570:0:0:0,-10,-10 0/0:99:34:34:1170:0:0:0,-10,-10 0/0:79.0675:24:24:866:0:0:0,-7.22472,-10 0/0:99:42:42:1557:0:0:0,-10,-10 0/0:99:40:40:1416:0:0:0,-10,-10 0/0:24.8822:6:6:228:0:0:0,-1.80618,-10 0/0:70.0367:21:21:779:0:0:0,-6.32163,-10 0/0:85.088:26:26:985:0:0:0,-7.82678,-10 0/0:27.8925:7:7:265:0:0:0,-2.10721,-10 0/0:39.9337:11:11:403:0:0:0,-3.31133,-10 0/0:73.0469:22:22:768:0:0:0,-6.62266,-10 0/0:51.9749:15:15:543:0:0:0,-4.51545,-10 scaffold_120 2614885 . G GCA 356.042 . AB=0.545455;ABP=3.60252;AC=2;AF=0.0108696;AN=184;AO=19;CIGAR=1M2I3M;DP=2561;DPB=2571;DPRA=0.907311;EPP=12.2676;EPPR=3.0964;GTI=0;LEN=2;MEANALT=1;MQM=58.2632;MQMR=59.9259;NS=92;NUMALT=1;ODDS=14.5902;PAIRED=0;PAIREDR=0;PAO=1;PQA=25.5;PQR=25.5;PRO=1;QA=638;QR=91562;RO=2522;RPP=44.2683;RPPR=5479.46;RUN=1;SAF=5;SAP=12.2676;SAR=14;SRF=1256;SRP=3.0964;SRR=1266;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:99:22:22:791:0:0:0,-6.62266,-10 0|0:84.4361:11:11:406:0:0:0,-3.31133,-10 0|0:99:27:27:1007:0:0:0,-8.12781,-10 0|0:99:19:19:678:0:0:0,-5.71957,-10 0|0:99:17:17:629:0:0:0,-5.11751,-10 0|0:93.4669:14:14:514:0:0:0,-4.21442,-10 0|0:99:59:59:2149:0:0:0,-10,-10 0|0:99:46:46:1669:0:0:0,-10,-10 0|0:99:27:27:964:0:0:0,-8.12781,-10 0|0:63.3643:4:4:146:0:0:0,-1.20412,-10 0|0:93.4669:14:14:525:0:0:0,-4.21442,-10 0|0:75.4055:8:8:283:0:0:0,-2.40824,-10 0|0:99:48:47:1691:0:0:0,-10,-10 0|0:99:30:30:1114:0:0:0,-9.0309,-10 0|0:99:39:38:1383:0:0:0,-10,-10 0|0:99:26:25:880:0:0:0,-7.52575,-10 0|0:99:32:32:1163:0:0:0,-9.63296,-10 0|0:93.4669:14:14:520:0:0:0,-4.21442,-10 0|0:99:35:34:1198:0:0:0,-10,-10 0|0:99:55:55:2047:0:0:0,-10,-10 0|0:99:24:24:855:0:0:0,-7.22472,-10 0|0:99:47:47:1729:0:0:0,-10,-10 0|0:87.4466:12:12:409:0:0:0,-3.61236,-10 0|0:99:31:31:1128:0:0:0,-9.33193,-10 0|0:99:29:29:1052:0:0:0,-8.72987,-10 0|0:99:31:31:1138:0:0:0,-9.33193,-10 0|0:99:32:32:1178:0:0:0,-9.63296,-10 0|0:99:19:19:645:0:0:0,-5.71957,-10 0|0:99:30:30:1088:0:0:0,-9.0309,-10 0|0:99:46:46:1689:0:0:0,-10,-10 0|0:75.4055:8:8:299:0:0:0,-2.40824,-10 0|0:72.3952:7:7:247:0:0:0,-2.10721,-10 0|0:99:25:25:905:0:0:0,-7.52575,-10 0|0:84.4361:11:11:392:0:0:0,-3.31133,-10 0|0:99:21:21:782:0:0:0,-6.32163,-10 0|0:99:18:18:676:0:0:0,-5.41854,-10 0|0:87.4466:12:12:429:0:0:0,-3.61236,-10 0|0:99:39:38:1414:0:0:0,-10,-10 0|0:99:28:28:1038:0:0:0,-8.42884,-10 0|0:99:18:18:654:0:0:0,-5.41854,-10 0|0:99:46:46:1679:0:0:0,-10,-10 0|0:99:20:20:703:0:0:0,-6.0206,-10 0|0:99:35:35:1278:0:0:0,-10,-10 0|0:99:46:46:1660:0:0:0,-10,-10 0|0:99:39:38:1377:0:0:0,-10,-10 0|0:99:23:22:823:0:0:0,-6.62266,-10 0|0:99:79:79:2896:0:0:0,-10,-10 0|0:99:29:29:1058:0:0:0,-8.72987,-10 0|0:99:19:19:700:0:0:0,-5.71957,-10 0|0:99:48:48:1714:0:0:0,-10,-10 0|0:99:27:27:951:0:0:0,-8.12781,-10 0|0:99:41:41:1490:0:0:0,-10,-10 0|0:99:26:26:931:0:0:0,-7.82678,-10 0|0:87.4466:12:12:441:0:0:0,-3.61236,-10 0|0:99:69:67:2428:0:0:0,-10,-10 0|0:99:25:25:912:0:0:0,-7.52575,-10 0|0:99:30:30:1091:0:0:0,-9.0309,-10 0|0:90.4568:14:13:478:0:0:0,-3.91339,-10 0|0:99:30:30:1073:0:0:0,-9.0309,-10 0|1:99:12:2:74:10:315:-10,0,-5.23718 0|0:99:39:38:1423:0:0:0,-10,-10 0|0:99:25:24:900:0:0:0,-7.22472,-10 0|0:99:51:51:1840:0:0:0,-10,-10 0|0:99:34:34:1214:0:0:0,-10,-10 0|0:84.4361:11:11:415:0:0:0,-3.31133,-10 0|0:99:39:38:1339:0:0:0,-10,-10 0|1:99:21:13:456:8:294:-10,0,-10 0|0:96.4768:16:15:563:0:0:0,-4.51545,-10 0|0:99:49:48:1717:0:0:0,-10,-10 0|0:99:18:18:633:0:0:0,-5.41854,-10 0|0:99:30:30:1117:0:0:0,-9.0309,-10 0|0:99:37:37:1352:0:0:0,-10,-10 0|0:99:27:26:936:0:0:0,-7.82678,-10 0|0:99:22:22:804:0:0:0,-6.62266,-10 0|0:99:45:45:1620:0:0:0,-10,-10 0|0:99:21:20:732:0:0:0,-6.0206,-10 0|0:99:20:20:709:0:0:0,-6.0206,-10 0|0:99:21:21:784:0:0:0,-6.32163,-10 0|0:72.3952:7:7:241:0:0:0,-2.10721,-10 0|0:99:32:32:1152:0:0:0,-9.63296,-10 0|0:99:43:42:1514:1:29:0,-8.41082,-10 0|0:99:34:34:1208:0:0:0,-10,-10 0|0:99:24:24:880:0:0:0,-7.22472,-10 0|0:99:42:42:1527:0:0:0,-10,-10 0|0:99:40:38:1363:0:0:0,-10,-10 0|0:69.3849:6:6:218:0:0:0,-1.80618,-10 0|0:99:21:21:782:0:0:0,-6.32163,-10 0|0:99:26:25:911:0:0:0,-7.52575,-10 0|0:72.3952:7:7:256:0:0:0,-2.10721,-10 0|0:84.4361:11:11:395:0:0:0,-3.31133,-10 0|0:99:22:22:761:0:0:0,-6.62266,-10 0|0:96.4768:15:15:539:0:0:0,-4.51545,-10 scaffold_121 1185071 . C T 698.491 . AB=0.828571;ABP=35.8306;AC=3;AF=0.0163043;AN=184;AO=30;CIGAR=1X;DP=1413;DPB=1413;DPRA=0.823789;EPP=5.61607;EPPR=11.6145;GTI=2;LEN=1;MEANALT=1;MQM=30;MQMR=28.8944;NS=92;NUMALT=1;ODDS=6.21411;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1100;QR=49905;RO=1382;RPP=68.1545;RPPR=2995.31;RUN=1;SAF=18;SAP=5.61607;SAR=12;SRF=729;SRP=12.0859;SRR=653;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:42.086:8:8:276:0:0:0,-2.40824,-10 0/0:42.086:8:8:252:0:0:0,-2.40824,-10 0/0:63.1581:15:15:556:0:0:0,-4.51545,-10 0/0:54.1272:12:12:450:0:0:0,-3.61236,-10 0/0:42.086:8:8:295:0:0:0,-2.40824,-10 0/0:39.0757:7:7:256:0:0:0,-2.10721,-10 0/0:81.2198:21:21:752:0:0:0,-6.32163,-10 0/0:66.1684:16:16:562:0:0:0,-4.81648,-10 0/1:0.00130472:9:0:0:9:322:-10,-2.70927,0 0/0:30.0448:4:4:150:0:0:0,-1.20412,-10 0/0:45.0963:9:9:327:0:0:0,-2.70927,-10 0/0:33.0551:5:5:187:0:0:0,-1.50515,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:69.1787:17:17:612:0:0:0,-5.11751,-10 0/0:90.2499:24:24:881:0:0:0,-7.22472,-10 0/0:90.2499:24:24:897:0:0:0,-7.22472,-10 0/0:96.272:26:26:917:0:0:0,-7.82678,-10 0/0:39.0757:7:7:244:0:0:0,-2.10721,-10 0/0:66.1684:16:16:584:0:0:0,-4.81648,-10 0/0:99:29:29:1035:0:0:0,-8.72987,-10 0/0:60.1478:14:14:478:0:0:0,-4.21442,-10 0/0:78.2095:20:20:697:0:0:0,-6.0206,-10 0/0:51.1169:11:11:401:0:0:0,-3.31133,-10 0/0:57.1375:13:13:489:0:0:0,-3.91339,-10 0/0:45.0963:9:9:341:0:0:0,-2.70927,-10 0/0:60.1478:14:14:505:0:0:0,-4.21442,-10 0/0:63.1581:15:15:537:0:0:0,-4.51545,-10 0/0:51.1169:11:11:395:0:0:0,-3.31133,-10 0/0:75.1993:19:19:647:0:0:0,-5.71957,-10 0/0:99:28:28:1057:0:0:0,-8.42884,-10 0/0:27.0345:3:3:114:0:0:0,-0.90309,-10 0/0:33.0551:5:5:155:0:0:0,-1.50515,-10 0/0:72.189:18:18:634:0:0:0,-5.41854,-10 0/0:57.1375:13:13:470:0:0:0,-3.91339,-10 0/0:66.1684:16:16:595:0:0:0,-4.81648,-10 0/0:27.0345:3:3:99:0:0:0,-0.90309,-9.24 0/0:57.1375:13:13:464:0:0:0,-3.91339,-10 0/0:69.1787:17:17:620:0:0:0,-5.11751,-10 0/0:54.1272:12:12:450:0:0:0,-3.61236,-10 0/0:60.1478:14:14:517:0:0:0,-4.21442,-10 0/0:90.2499:24:24:842:0:0:0,-7.22472,-10 0/0:72.189:18:18:660:0:0:0,-5.41854,-10 0/0:30.6216:16:15:538:1:28:0,-0.81236,-10 0/0:75.1993:19:19:710:0:0:0,-5.71957,-10 0/0:75.1993:19:19:686:0:0:0,-5.71957,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 0/0:78.2095:20:20:727:0:0:0,-6.0206,-10 0/0:87.24:23:23:870:0:0:0,-6.92369,-10 0/0:42.086:8:8:292:0:0:0,-2.40824,-10 0/0:99:35:35:1223:0:0:0,-10,-10 0/0:57.1375:13:13:492:0:0:0,-3.91339,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:42.086:8:8:298:0:0:0,-2.40824,-10 0/0:30.0448:4:4:152:0:0:0,-1.20412,-10 0/0:93.2593:25:25:923:0:0:0,-7.52575,-10 0/0:33.0551:5:5:190:0:0:0,-1.50515,-10 0/0:69.1787:17:17:581:0:0:0,-5.11751,-10 0/0:57.1375:13:13:476:0:0:0,-3.91339,-10 0/0:57.1375:13:13:470:0:0:0,-3.91339,-10 0/1:0.00130472:9:0:0:9:341:-10,-2.70927,0 0/0:78.2095:20:20:718:0:0:0,-6.0206,-10 0/0:72.189:18:18:638:0:0:0,-5.41854,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:57.1375:13:13:489:0:0:0,-3.91339,-10 0/0:51.1169:11:11:411:0:0:0,-3.31133,-10 0/0:96.272:26:26:984:0:0:0,-7.82678,-10 0/1:99:17:6:184:11:409:-10,0,-10 0/0:42.086:8:8:275:0:0:0,-2.40824,-10 0/0:90.2499:24:24:808:0:0:0,-7.22472,-10 0/0:45.0963:9:9:334:0:0:0,-2.70927,-10 0/0:39.0757:7:7:255:0:0:0,-2.10721,-10 0/0:87.24:23:23:836:0:0:0,-6.92369,-10 0/0:57.1375:13:13:492:0:0:0,-3.91339,-10 0/0:66.1684:16:16:559:0:0:0,-4.81648,-10 0/0:63.1581:15:15:555:0:0:0,-4.51545,-10 0/0:39.0757:7:7:233:0:0:0,-2.10721,-10 0/0:63.1581:15:15:526:0:0:0,-4.51545,-10 0/0:48.1066:10:10:380:0:0:0,-3.0103,-10 0/0:33.0551:5:5:172:0:0:0,-1.50515,-10 0/0:63.1581:15:15:564:0:0:0,-4.51545,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:66.1684:16:16:586:0:0:0,-4.81648,-10 0/0:99:29:29:992:0:0:0,-8.72987,-10 0/0:63.1581:15:15:541:0:0:0,-4.51545,-10 0/0:93.2593:26:25:900:0:0:0,-7.52575,-10 0/0:36.0654:6:6:213:0:0:0,-1.80618,-10 0/0:54.1272:12:12:432:0:0:0,-3.61236,-10 0/0:51.1169:11:11:389:0:0:0,-3.31133,-10 0/0:42.086:8:8:292:0:0:0,-2.40824,-10 0/0:81.2198:21:21:780:0:0:0,-6.32163,-10 0/0:48.1066:10:10:337:0:0:0,-3.0103,-10 0/0:57.1375:13:13:483:0:0:0,-3.91339,-10 scaffold_121 1185107 . T C 3246.29 . AB=0.473118;ABP=4.17776;AC=12;AF=0.0652174;AN=184;AO=122;CIGAR=1X;DP=1409;DPB=1409;DPRA=1.51724;EPP=3.65106;EPPR=14.9247;GTI=1;LEN=1;MEANALT=1;MQM=27.9344;MQMR=29.0062;NS=92;NUMALT=1;ODDS=3.87903;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4494;QR=47168;RO=1286;RPP=267.93;RPPR=2795.52;RUN=1;SAF=58;SAP=3.65106;SAR=64;SRF=685;SRP=14.9247;SRR=601;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:32.3494:8:8:279:0:0:0,-2.40824,-10 0/0:32.3494:8:8:281:0:0:0,-2.40824,-10 0/0:53.4215:15:15:555:0:0:0,-4.51545,-10 0/0:44.3906:12:12:450:0:0:0,-3.61236,-10 0/0:32.3494:8:8:303:0:0:0,-2.40824,-10 0/0:26.3288:7:6:228:0:0:0,-1.80618,-10 1/1:47.2716:21:0:0:21:787:-10,-6.32163,0 0/0:56.4318:16:16:570:0:0:0,-4.81648,-10 0/0:35.3597:9:9:328:0:0:0,-2.70927,-10 0/0:20.3082:4:4:152:0:0:0,-1.20412,-10 0/0:35.3597:9:9:331:0:0:0,-2.70927,-10 0/0:23.3185:5:5:188:0:0:0,-1.50515,-10 0/0:99:34:34:1227:0:0:0,-10,-10 0/0:59.4421:17:17:643:0:0:0,-5.11751,-10 0/0:80.5142:24:24:901:0:0:0,-7.22472,-10 0/1:99:24:13:494:11:417:-10,0,-10 0/1:99:26:17:606:9:315:-10,0,-10 0/0:29.3391:7:7:263:0:0:0,-2.10721,-10 0/0:56.4318:16:16:606:0:0:0,-4.81648,-10 0/0:95.5643:29:29:1039:0:0:0,-8.72987,-10 0/0:50.4112:14:14:493:0:0:0,-4.21442,-10 0/0:68.473:20:20:744:0:0:0,-6.0206,-10 0/0:41.3803:11:11:417:0:0:0,-3.31133,-10 0/0:47.4009:13:13:479:0:0:0,-3.91339,-10 0/0:35.3597:9:9:320:0:0:0,-2.70927,-10 0/0:50.4112:14:14:520:0:0:0,-4.21442,-10 0/0:53.4215:15:15:546:0:0:0,-4.51545,-10 0/0:41.3803:11:11:393:0:0:0,-3.31133,-10 0/0:65.4627:19:19:685:0:0:0,-5.71957,-10 0/0:92.5547:28:28:1033:0:0:0,-8.42884,-10 0/0:17.2979:3:3:114:0:0:0,-0.90309,-10 0/0:23.3185:5:5:159:0:0:0,-1.50515,-10 0/0:62.4524:18:18:670:0:0:0,-5.41854,-10 0/0:47.4009:13:13:483:0:0:0,-3.91339,-10 0/0:56.4318:16:16:586:0:0:0,-4.81648,-10 0/0:17.2979:3:3:114:0:0:0,-0.90309,-10 0/0:47.4009:13:13:492:0:0:0,-3.91339,-10 0/0:59.4421:17:17:641:0:0:0,-5.11751,-10 0/0:44.3906:12:12:449:0:0:0,-3.61236,-10 0/0:50.4112:14:14:528:0:0:0,-4.21442,-10 0/0:80.5142:24:24:875:0:0:0,-7.22472,-10 0/0:62.4524:18:18:655:0:0:0,-5.41854,-10 0/0:56.4318:16:16:588:0:0:0,-4.81648,-10 0/0:65.4627:19:19:689:0:0:0,-5.71957,-10 0/0:65.4627:19:19:718:0:0:0,-5.71957,-10 0/0:95.5643:29:29:1068:0:0:0,-8.72987,-10 0/0:65.4627:19:19:699:0:0:0,-5.71957,-10 0/0:77.5039:23:23:817:0:0:0,-6.92369,-10 0/0:32.3494:8:8:299:0:0:0,-2.40824,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:47.4009:13:13:487:0:0:0,-3.91339,-10 0/0:95.5643:29:29:1073:0:0:0,-8.72987,-10 0/0:32.3494:8:8:282:0:0:0,-2.40824,-10 0/0:20.3082:4:4:152:0:0:0,-1.20412,-10 0/0:83.5244:25:25:907:0:0:0,-7.52575,-10 0/0:23.3185:5:5:190:0:0:0,-1.50515,-10 0/0:59.4421:17:17:604:0:0:0,-5.11751,-10 0/0:47.4009:13:13:474:0:0:0,-3.91339,-10 0/0:47.4009:13:13:469:0:0:0,-3.91339,-10 0/0:35.3597:9:9:342:0:0:0,-2.70927,-10 0/0:68.473:20:20:729:0:0:0,-6.0206,-10 0/1:0.0209401:18:1:38:17:603:-10,-0.363267,0 0/1:99:27:14:527:13:491:-10,0,-10 0/0:47.4009:13:13:492:0:0:0,-3.91339,-10 0/0:41.3803:11:11:366:0:0:0,-3.31133,-10 0/0:86.5346:26:26:981:0:0:0,-7.82678,-10 0/1:99:17:11:416:6:226:-10,0,-10 0/0:32.3494:8:8:289:0:0:0,-2.40824,-10 0/1:99:24:12:435:12:421:-10,0,-10 0/0:35.3597:9:9:339:0:0:0,-2.70927,-10 0/0:29.3391:7:7:266:0:0:0,-2.10721,-10 0/0:77.5039:23:23:863:0:0:0,-6.92369,-10 0/0:47.4009:13:13:490:0:0:0,-3.91339,-10 0/0:56.4318:16:16:578:0:0:0,-4.81648,-10 0/0:53.4215:15:15:566:0:0:0,-4.51545,-10 0/0:29.3391:7:7:258:0:0:0,-2.10721,-10 0/0:53.4215:15:15:526:0:0:0,-4.51545,-10 0/0:38.37:10:10:345:0:0:0,-3.0103,-10 0/0:23.3185:5:5:186:0:0:0,-1.50515,-10 0/0:53.4215:15:15:545:0:0:0,-4.51545,-10 0/0:99:33:33:1183:0:0:0,-9.93399,-10 0/0:56.4318:16:16:606:0:0:0,-4.81648,-10 0/1:99:29:19:714:10:375:-10,0,-10 0/0:50.4112:14:14:498:0:0:0,-4.21442,-10 0/0:80.5142:24:24:851:0:0:0,-7.22472,-10 0/0:26.3288:6:6:228:0:0:0,-1.80618,-10 0/0:44.3906:12:12:454:0:0:0,-3.61236,-10 0/0:41.3803:11:11:390:0:0:0,-3.31133,-10 0/0:32.3494:8:8:271:0:0:0,-2.40824,-10 0/1:99:21:11:396:10:377:-10,0,-10 0/0:38.37:10:10:356:0:0:0,-3.0103,-10 1/1:23.1892:13:0:0:13:482:-10,-3.91339,0 scaffold_121 1280202 . G A 37658.3 . AB=0.444961;ABP=19.9815;AC=99;AF=0.538043;AN=184;AO=1259;CIGAR=1X;DP=2415;DPB=2415;DPRA=1.1459;EPP=14.3264;EPPR=3.02728;GTI=2;LEN=1;MEANALT=1.04839;MQM=59.9285;MQMR=59.9696;NS=92;NUMALT=1;ODDS=0.538833;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46211;QR=41541;RO=1151;RPP=2256.32;RPPR=2063.22;RUN=1;SAF=656;SAP=7.85515;SAR=603;SRF=563;SRP=4.18942;SRR=588;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:55.0625:21:0:0:21:792:-10,-6.32163,0 1/1:33.9904:14:0:0:14:531:-10,-4.21442,0 1/1:76.1346:28:0:0:28:1033:-10,-8.42884,0 1/1:49.0419:19:0:0:19:660:-10,-5.71957,0 0/1:99:21:10:375:11:414:-10,0,-10 1/1:21.9492:10:0:0:10:379:-10,-3.0103,0 1/1:99:53:0:0:52:1898:-10,-10,0 0/1:99:31:19:687:12:411:-10,0,-10 1/1:30.9801:13:0:0:13:473:-10,-3.91339,0 0/0:14.2467:6:6:213:0:0:0,-1.80618,-10 0/0:20.2673:8:8:304:0:0:0,-2.40824,-10 1/1:24.9595:11:0:0:11:416:-10,-3.31133,0 1/1:99:46:0:0:46:1673:-10,-10,0 0/1:99:43:29:1066:14:519:-10,0,-10 0/1:99:34:19:671:15:569:-10,0,-10 1/1:88.1756:32:0:0:32:1184:-10,-9.63296,0 1/1:99:37:0:0:37:1394:-10,-10,0 1/1:40.011:16:0:0:16:570:-10,-4.81648,0 0/1:99:32:20:712:12:456:-10,0,-10 0/0:99:48:48:1743:0:0:0,-10,-10 0/1:99:26:16:577:10:376:-10,0,-10 0/0:98.5329:34:34:1264:0:0:0,-10,-10 0/0:23.2776:10:9:331:0:0:0,-2.70927,-10 0/1:99:31:17:594:14:526:-10,0,-10 1/1:70.114:26:0:0:26:966:-10,-7.82678,0 0/0:99:44:44:1621:0:0:0,-10,-10 1/1:55.0625:21:0:0:21:706:-10,-6.32163,0 1/1:58.0728:22:0:0:22:828:-10,-6.62266,0 0/0:86.4938:30:30:1076:0:0:0,-9.0309,-10 0/1:99:43:25:746:18:676:-10,0,-10 0/0:11.2364:5:5:166:0:0:0,-1.50515,-10 0/1:1.042:4:0:0:4:148:-10,-1.20412,0 0/0:62.4115:22:22:813:0:0:0,-6.62266,-10 0/0:41.3394:15:15:550:0:0:0,-4.51545,-10 1/1:82.1551:30:0:0:30:1126:-10,-9.0309,0 0/0:20.2673:8:8:289:0:0:0,-2.40824,-10 0/0:56.3909:20:20:673:0:0:0,-6.0206,-10 0/1:99:53:35:1213:18:673:-10,0,-10 1/1:99:36:0:0:36:1312:-10,-10,0 0/1:99:20:13:481:7:242:-10,0,-10 0/1:99:35:19:683:16:597:-10,0,-10 1/1:9.4268:22:1:38:21:786:-10,-1.48024,0 1/1:97.2051:35:0:0:35:1302:-10,-10,0 0/1:99:49:27:981:22:794:-10,0,-10 0/0:66.7752:39:38:1419:1:34:0,-6.74911,-10 0/0:37.9637:23:22:821:1:16:0,-3.96196,-10 0/0:99:65:65:2326:0:0:0,-10,-10 0/0:99:36:36:1316:0:0:0,-10,-10 0/0:11.2364:5:5:188:0:0:0,-1.50515,-10 0/1:99:51:25:879:26:956:-10,0,-10 0/0:41.3394:15:15:560:0:0:0,-4.51545,-10 0/1:99:47:23:868:23:840:-10,0,-10 1/1:43.0213:17:0:0:17:646:-10,-5.11751,0 0/0:50.3703:18:18:670:0:0:0,-5.41854,-10 0/0:99:49:49:1757:0:0:0,-10,-10 0/0:56.3909:20:20:678:0:0:0,-6.0206,-10 0/0:99:38:38:1390:0:0:0,-10,-10 0/0:35.3188:13:13:487:0:0:0,-3.91339,-10 0/0:77.463:28:27:966:0:0:0,-8.12781,-10 1/1:30.9801:13:0:0:13:486:-10,-3.91339,0 1/1:85.1654:31:0:0:31:1147:-10,-9.33193,0 1/1:58.0728:22:0:0:22:811:-10,-6.62266,0 0/1:99:58:29:993:29:1073:-10,0,-10 1/1:88.1756:33:0:0:32:1142:-10,-9.63296,0 0/0:21.2147:17:16:553:1:16:0,-2.28706,-10 1/1:99:37:0:0:37:1332:-10,-10,0 1/1:55.0625:21:0:0:21:758:-10,-6.32163,0 1/1:18.9389:9:0:0:9:342:-10,-2.70927,0 1/1:30.7197:45:2:76:43:1518:-10,-3.33071,0 1/1:33.9904:14:0:0:14:506:-10,-4.21442,0 0/0:74.4527:26:26:938:0:0:0,-7.82678,-10 0/0:99:40:40:1493:0:0:0,-10,-10 0/0:62.4115:22:22:788:0:0:0,-6.62266,-10 0/0:53.3806:19:19:695:0:0:0,-5.71957,-10 0/0:83.4836:29:29:1066:0:0:0,-8.72987,-10 1/1:43.0213:17:0:0:17:615:-10,-5.11751,0 1/1:43.0213:17:0:0:17:637:-10,-5.11751,0 0/0:35.3188:13:13:462:0:0:0,-3.91339,-10 1/1:30.9801:13:0:0:13:494:-10,-3.91339,0 1/1:33.9904:14:0:0:14:517:-10,-4.21442,0 1/1:99:46:0:0:46:1694:-10,-10,0 1/1:61.0831:23:0:0:23:836:-10,-6.92369,0 0/1:99:39:20:754:19:707:-10,0,-10 0/1:99:26:11:415:15:545:-10,0,-10 1/1:97.2051:35:0:0:35:1309:-10,-10,0 0/1:0.238009:2:0:0:2:69:-6.555,-0.60206,0 0/0:44.3497:16:16:581:0:0:0,-4.81648,-10 0/0:41.3394:15:15:535:0:0:0,-4.51545,-10 1/1:21.9492:10:0:0:10:356:-10,-3.0103,0 1/1:55.0625:21:0:0:21:749:-10,-6.32163,0 1/1:70.114:26:0:0:26:972:-10,-7.82678,0 1/1:46.0316:18:0:0:18:658:-10,-5.41854,0 scaffold_121 1300525 . C A 7327.5 . AB=0.470175;ABP=5.21225;AC=36;AF=0.195652;AN=184;AO=274;CIGAR=1X;DP=1434;DPB=1434;DPRA=1.0552;EPP=4.15151;EPPR=3.13052;GTI=5;LEN=1;MEANALT=1;MQM=59.9927;MQMR=59.9983;NS=92;NUMALT=1;ODDS=0.640232;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9915;QR=42232;RO=1156;RPP=597.994;RPPR=2513.23;RUN=1;SAF=143;SAP=4.15151;SAR=131;SRF=582;SRP=3.13052;SRR=574;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:38.4952:9:9:333:0:0:0,-2.70927,-10 0/0:26.454:5:5:186:0:0:0,-1.50515,-10 0/0:59.5673:17:16:563:0:0:0,-4.81648,-10 0/0:47.5261:13:12:415:0:0:0,-3.61236,-10 0/1:0.0331983:3:0:0:3:114:-10,-0.90309,0 0/1:0.0331983:3:0:0:3:114:-10,-0.90309,0 0/0:98.6961:29:29:1069:0:0:0,-8.72987,-10 0/0:98.6961:29:29:1088:0:0:0,-8.72987,-10 0/0:50.5364:13:13:487:0:0:0,-3.91339,-10 0/0:17.4231:2:2:76:0:0:0,-0.60206,-7.22 0/0:26.454:5:5:185:0:0:0,-1.50515,-10 0/0:23.4437:4:4:152:0:0:0,-1.20412,-10 0/1:99:29:14:522:15:535:-10,0,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:62.5776:18:17:609:0:0:0,-5.11751,-10 0/1:99:15:9:342:6:222:-10,0,-10 0/1:99:19:10:375:9:341:-10,0,-10 0/1:0.564268:7:0:0:7:265:-10,-2.10721,0 0/1:99:20:8:293:12:451:-10,0,-10 0/0:99:32:32:1183:0:0:0,-9.63296,-10 0/0:47.5261:12:12:429:0:0:0,-3.61236,-10 0/0:99:32:32:1209:0:0:0,-9.63296,-10 0/0:20.4334:3:3:107:0:0:0,-0.90309,-9.98667 0/1:16.5613:7:6:228:1:29:-1.63789,0,-10 1/1:39.2739:18:0:0:18:662:-10,-5.41854,0 0/0:77.6291:22:22:836:0:0:0,-6.62266,-10 1/1:9.17093:8:0:0:8:282:-10,-2.40824,0 1/1:42.2842:19:0:0:19:687:-10,-5.71957,0 0/0:38.4952:9:9:320:0:0:0,-2.70927,-10 0/1:99:35:25:920:10:376:-10,0,-10 0/0:23.4437:4:4:150:0:0:0,-1.20412,-10 1/1:15.1915:10:0:0:10:336:-10,-3.0103,0 0/0:65.5879:18:18:634:0:0:0,-5.41854,-10 0/0:35.4849:8:8:292:0:0:0,-2.40824,-10 0/0:59.5673:16:16:588:0:0:0,-4.81648,-10 0/0:26.454:5:5:190:0:0:0,-1.50515,-10 0/0:26.454:5:5:186:0:0:0,-1.50515,-10 0/0:35.4849:8:8:245:0:0:0,-2.40824,-10 0/0:38.4952:9:9:340:0:0:0,-2.70927,-10 0/0:47.5261:12:12:428:0:0:0,-3.61236,-10 0/1:99:22:12:432:10:360:-10,0,-10 0/0:68.5982:19:19:691:0:0:0,-5.71957,-10 0/0:53.5467:14:14:527:0:0:0,-4.21442,-10 0/0:99:32:32:1120:0:0:0,-9.63296,-10 0/0:68.5982:19:19:710:0:0:0,-5.71957,-10 0/0:38.4952:9:9:326:0:0:0,-2.70927,-10 0/0:99:45:45:1562:0:0:0,-10,-10 0/0:71.6085:20:20:738:0:0:0,-6.0206,-10 0/0:26.454:5:5:167:0:0:0,-1.50515,-10 0/1:99:31:15:556:16:556:-10,0,-10 0/0:44.5158:11:11:418:0:0:0,-3.31133,-10 0/1:99:34:20:698:14:521:-10,0,-10 1/1:15.1915:10:0:0:10:376:-10,-3.0103,0 0/0:26.454:5:5:185:0:0:0,-1.50515,-10 0/0:99:31:31:1133:0:0:0,-9.33193,-10 0/0:47.5261:12:12:439:0:0:0,-3.61236,-10 0/0:65.5879:18:18:669:0:0:0,-5.41854,-10 0/0:23.4437:4:4:148:0:0:0,-1.20412,-10 0/0:50.5364:13:13:494:0:0:0,-3.91339,-10 0/0:35.4849:8:8:302:0:0:0,-2.40824,-10 1/1:60.346:25:0:0:25:922:-10,-7.52575,0 0/0:59.5673:16:16:588:0:0:0,-4.81648,-10 0/0:89.6706:26:26:923:0:0:0,-7.82678,-10 1/1:9.17093:8:0:0:8:259:-10,-2.40824,0 0/0:38.4952:9:9:337:0:0:0,-2.70927,-10 0/0:59.5673:16:16:595:0:0:0,-4.81648,-10 0/0:38.4952:9:9:341:0:0:0,-2.70927,-10 1/1:12.1812:9:0:0:9:336:-10,-2.70927,0 0/1:99:28:18:681:10:345:-10,0,-10 1/1:12.1812:9:0:0:9:329:-10,-2.70927,0 0/0:71.6085:20:20:711:0:0:0,-6.0206,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:71.6085:20:20:717:0:0:0,-6.0206,-10 0/0:71.6085:21:20:750:0:0:0,-6.0206,-10 0/0:77.6291:22:22:821:0:0:0,-6.62266,-10 0/1:0.564268:7:0:0:7:243:-10,-2.10721,0 0/0:53.5467:14:14:484:0:0:0,-4.21442,-10 0/0:26.5699:13:12:408:1:16:0,-1.19945,-10 0/0:32.4746:7:7:236:0:0:0,-2.10721,-10 0/0:35.4849:8:8:295:0:0:0,-2.40824,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:83.6496:24:24:895:0:0:0,-7.22472,-10 0/0:74.6188:21:21:759:0:0:0,-6.32163,-10 0/1:99:24:14:503:10:378:-10,0,-10 1/1:54.3254:23:0:0:23:822:-10,-6.92369,0 0/1:0.00827583:1:0:0:1:38:-3.8,-0.30103,0 0/0:53.5467:14:14:497:0:0:0,-4.21442,-10 0/0:26.454:5:5:167:0:0:0,-1.50515,-10 0/0:41.5055:10:10:364:0:0:0,-3.0103,-10 0/0:53.5467:14:14:526:0:0:0,-4.21442,-10 0/0:35.4849:8:8:304:0:0:0,-2.40824,-10 0/0:41.5055:10:10:375:0:0:0,-3.0103,-10 scaffold_121 1454776 . G A 1352.61 . AB=0.760563;ABP=44.88;AC=4;AF=0.0217391;AN=184;AO=54;CIGAR=1X;DP=1995;DPB=1995;DPRA=0.81185;EPP=7.03155;EPPR=4.98477;GTI=3;LEN=1;MEANALT=1.25;MQM=59.037;MQMR=59.9521;NS=92;NUMALT=1;ODDS=0.866317;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2010;QR=70032;RO=1940;RPP=120.27;RPPR=4215.67;RUN=1;SAF=22;SAP=7.03155;SAR=32;SRF=949;SRP=4.98477;SRR=991;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.5581:16:16:582:0:0:0,-4.81648,-10 0/0:43.486:9:9:328:0:0:0,-2.70927,-10 0/0:99:28:28:991:0:0:0,-8.42884,-10 0/1:0.292885:15:0:0:15:570:-10,-4.51545,0 0/0:67.5684:17:17:613:0:0:0,-5.11751,-10 0/0:64.5581:16:16:593:0:0:0,-4.81648,-10 0/0:99:45:45:1614:0:0:0,-10,-10 0/0:70.5787:18:18:616:0:0:0,-5.41854,-10 0/0:67.5684:17:17:618:0:0:0,-5.11751,-10 0/0:31.4448:5:5:186:0:0:0,-1.50515,-10 0/0:52.5169:12:12:432:0:0:0,-3.61236,-10 0/0:25.4242:3:3:114:0:0:0,-0.90309,-10 0/0:99:53:53:1931:0:0:0,-10,-10 0/0:99:36:36:1286:0:0:0,-10,-10 0/0:99:34:34:1276:0:0:0,-10,-10 0/0:94.6611:26:26:957:0:0:0,-7.82678,-10 0/0:79.6096:21:21:778:0:0:0,-6.32163,-10 0/0:40.4757:8:8:295:0:0:0,-2.40824,-10 0/0:88.6405:24:24:862:0:0:0,-7.22472,-10 0/0:99:47:47:1651:0:0:0,-10,-10 0/0:55.5272:13:13:490:0:0:0,-3.91339,-10 0/0:99:32:32:1197:0:0:0,-9.63296,-10 0/0:37.4654:7:7:262:0:0:0,-2.10721,-10 0/0:64.5581:16:16:573:0:0:0,-4.81648,-10 0/0:70.5787:18:18:659:0:0:0,-5.41854,-10 0/0:79.6096:21:21:738:0:0:0,-6.32163,-10 0/0:94.6611:26:26:965:0:0:0,-7.82678,-10 0/0:64.5581:16:16:584:0:0:0,-4.81648,-10 0/0:79.6096:21:21:741:0:0:0,-6.32163,-10 0/0:99:39:39:1412:0:0:0,-10,-10 0/0:58.5375:14:14:483:0:0:0,-4.21442,-10 .:.:.:.:.:.:.:. 0/0:85.6299:23:23:837:0:0:0,-6.92369,-10 0/0:67.5684:17:17:617:0:0:0,-5.11751,-10 0/0:82.6198:22:22:800:0:0:0,-6.62266,-10 0/0:43.486:9:9:313:0:0:0,-2.70927,-10 0/0:25.4242:3:3:114:0:0:0,-0.90309,-10 0/0:99:31:31:1036:0:0:0,-9.33193,-10 0/0:64.5581:16:16:547:0:0:0,-4.81648,-10 0/0:52.5169:12:12:450:0:0:0,-3.61236,-10 0/0:88.6405:24:24:846:0:0:0,-7.22472,-10 0/0:43.486:9:9:318:0:0:0,-2.70927,-10 0/0:76.5993:20:20:721:0:0:0,-6.0206,-10 0/0:99:35:35:1298:0:0:0,-10,-10 0/0:94.6611:26:26:948:0:0:0,-7.82678,-10 0/0:88.6405:24:24:905:0:0:0,-7.22472,-10 0/0:99:52:52:1851:0:0:0,-10,-10 0/0:85.6299:23:23:793:0:0:0,-6.92369,-10 0/0:94.6611:26:26:967:0:0:0,-7.82678,-10 0/0:99:29:29:1039:0:0:0,-8.72987,-10 0/0:64.5581:16:16:568:0:0:0,-4.81648,-10 0/0:99:43:43:1607:0:0:0,-10,-10 0/0:61.5478:15:15:528:0:0:0,-4.51545,-10 0/0:28.4345:4:4:152:0:0:0,-1.20412,-10 0/0:99:58:58:2082:0:0:0,-10,-10 0/0:61.5478:15:15:560:0:0:0,-4.51545,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:37.4654:7:7:244:0:0:0,-2.10721,-10 0/0:79.6096:21:21:727:0:0:0,-6.32163,-10 0/0:58.5375:14:14:506:0:0:0,-4.21442,-10 0/0:99:38:38:1347:0:0:0,-10,-10 0/0:99:28:28:995:0:0:0,-8.42884,-10 0/0:99:46:46:1673:0:0:0,-10,-10 0/0:85.6299:23:23:831:0:0:0,-6.92369,-10 0/0:43.486:9:9:333:0:0:0,-2.70927,-10 0/0:85.6299:23:23:858:0:0:0,-6.92369,-10 0/0:82.6198:22:22:810:0:0:0,-6.62266,-10 0/0:46.4963:10:10:341:0:0:0,-3.0103,-10 0/0:99:40:40:1450:0:0:0,-10,-10 0/0:64.5581:16:16:590:0:0:0,-4.81648,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 0/0:99:34:34:1206:0:0:0,-10,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:82.6198:22:22:740:0:0:0,-6.62266,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:61.5478:15:15:513:0:0:0,-4.51545,-10 0/1:0.143974:14:0:0:14:529:-10,-4.21442,0 0/0:58.5375:14:14:479:0:0:0,-4.21442,-10 0/0:40.4757:8:8:292:0:0:0,-2.40824,-10 0/0:40.4757:8:8:303:0:0:0,-2.40824,-10 0/0:94.6611:26:26:969:0:0:0,-7.82678,-10 0/0:82.6198:22:22:792:0:0:0,-6.62266,-10 0/0:99:32:32:1144:0:0:0,-9.63296,-10 0/1:1.31275:18:0:0:17:612:-10,-5.11751,0 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:31.4448:5:5:183:0:0:0,-1.50515,-10 0/0:58.5375:14:14:525:0:0:0,-4.21442,-10 0/0:52.5169:12:12:441:0:0:0,-3.61236,-10 0/0:49.5066:11:11:411:0:0:0,-3.31133,-10 0/1:99:24:16:581:8:299:-10,0,-10 0/0:70.5787:18:18:627:0:0:0,-5.41854,-10 0/0:58.5375:14:14:490:0:0:0,-4.21442,-10 scaffold_121 1473265 . G A 422.691 . AB=0.586207;ABP=4.88226;AC=1;AF=0.00543478;AN=184;AO=18;CIGAR=1X;DP=1641;DPB=1641;DPRA=1.85596;EPP=7.35324;EPPR=8.66309;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9908;NS=92;NUMALT=1;ODDS=5.09723;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=644;QR=59598;RO=1623;RPP=42.0968;RPPR=3509.96;RUN=1;SAF=6;SAP=7.35324;SAR=12;SRF=846;SRP=9.38022;SRR=777;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.3766:15:15:567:0:0:0,-4.51545,-10 0/0:46.3354:11:11:406:0:0:0,-3.31133,-10 0/0:55.3663:14:14:531:0:0:0,-4.21442,-10 0/0:49.3457:12:12:434:0:0:0,-3.61236,-10 0/0:46.3354:11:11:379:0:0:0,-3.31133,-10 0/0:58.3766:15:15:502:0:0:0,-4.51545,-10 0/0:99:34:34:1253:0:0:0,-10,-10 0/0:97.5077:28:28:1039:0:0:0,-8.42884,-10 0/0:28.2736:5:5:190:0:0:0,-1.50515,-10 0/0:28.2736:5:5:190:0:0:0,-1.50515,-10 0/0:25.2633:4:4:152:0:0:0,-1.20412,-10 0/0:43.3251:10:10:380:0:0:0,-3.0103,-10 0/0:94.4988:27:27:997:0:0:0,-8.12781,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:88.4792:25:25:899:0:0:0,-7.52575,-10 0/0:70.4178:19:19:692:0:0:0,-5.71957,-10 0/0:97.5077:28:28:1018:0:0:0,-8.42884,-10 0/0:28.2736:5:5:190:0:0:0,-1.50515,-10 0/0:49.3457:12:12:443:0:0:0,-3.61236,-10 0/0:96.5762:36:35:1276:1:15:0,-7.78078,-10 0/0:67.4075:18:18:668:0:0:0,-5.41854,-10 0/0:99:32:32:1179:0:0:0,-9.63296,-10 0/0:37.3045:8:8:281:0:0:0,-2.40824,-10 0/0:76.4384:21:21:760:0:0:0,-6.32163,-10 0/0:64.3972:17:17:601:0:0:0,-5.11751,-10 0/0:82.4589:23:23:869:0:0:0,-6.92369,-10 0/0:61.3869:16:16:603:0:0:0,-4.81648,-10 0/0:61.3869:16:16:563:0:0:0,-4.81648,-10 0/0:46.3354:11:11:414:0:0:0,-3.31133,-10 0/0:99:40:40:1466:0:0:0,-10,-10 0/0:31.2839:6:6:228:0:0:0,-1.80618,-10 0/0:22.253:3:3:112:0:0:0,-0.90309,-10 0/0:52.356:13:13:494:0:0:0,-3.91339,-10 0/0:64.3972:17:17:605:0:0:0,-5.11751,-10 0/0:79.4487:22:22:798:0:0:0,-6.62266,-10 0/0:43.3251:10:10:378:0:0:0,-3.0103,-10 0/0:52.356:13:13:491:0:0:0,-3.91339,-10 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:64.3972:17:17:634:0:0:0,-5.11751,-10 0/0:37.3045:8:8:298:0:0:0,-2.40824,-10 0/0:99:33:33:1244:0:0:0,-9.93399,-10 0/0:55.3663:14:14:488:0:0:0,-4.21442,-10 0/0:58.3766:15:15:564:0:0:0,-4.51545,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:55.3663:14:14:487:0:0:0,-4.21442,-10 0/0:61.3869:16:16:573:0:0:0,-4.81648,-10 0/0:99:30:30:1072:0:0:0,-9.0309,-10 0/0:85.4691:24:24:869:0:0:0,-7.22472,-10 0/0:46.3354:11:11:415:0:0:0,-3.31133,-10 0/0:99:30:30:1116:0:0:0,-9.0309,-10 0/0:49.3457:12:12:441:0:0:0,-3.61236,-10 0/0:99:29:29:1095:0:0:0,-8.72987,-10 0/0:49.3457:12:12:456:0:0:0,-3.61236,-10 0/0:22.253:3:3:109:0:0:0,-0.90309,-10 0/0:99:30:30:1084:0:0:0,-9.0309,-10 0/0:55.3663:14:14:499:0:0:0,-4.21442,-10 0/0:82.4589:23:23:851:0:0:0,-6.92369,-10 0/0:40.3148:9:9:322:0:0:0,-2.70927,-10 0/0:79.4487:22:22:795:0:0:0,-6.62266,-10 0/0:64.3972:17:17:609:0:0:0,-5.11751,-10 0/0:99:31:31:1173:0:0:0,-9.33193,-10 0/0:64.3972:17:17:621:0:0:0,-5.11751,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:91.4892:26:26:949:0:0:0,-7.82678,-10 0/0:43.3251:10:10:380:0:0:0,-3.0103,-10 0/0:94.4988:27:27:994:0:0:0,-8.12781,-10 0/0:43.3251:10:10:356:0:0:0,-3.0103,-10 0/0:28.2736:5:5:185:0:0:0,-1.50515,-10 0/0:99:31:31:1156:0:0:0,-9.33193,-10 0/0:28.2736:5:5:187:0:0:0,-1.50515,-10 0/0:70.4178:19:19:669:0:0:0,-5.71957,-10 0/1:99:29:12:454:17:629:-10,0,-10 0/0:55.3663:14:14:505:0:0:0,-4.21442,-10 0/0:49.3457:12:12:453:0:0:0,-3.61236,-10 0/0:91.4892:26:26:966:0:0:0,-7.82678,-10 0/0:52.356:13:13:436:0:0:0,-3.91339,-10 0/0:55.3663:14:14:530:0:0:0,-4.21442,-10 0/0:34.2942:7:7:242:0:0:0,-2.10721,-10 0/0:34.2942:7:7:242:0:0:0,-2.10721,-10 0/0:46.3354:11:11:380:0:0:0,-3.31133,-10 0/0:99:33:33:1146:0:0:0,-9.93399,-10 0/0:97.5077:28:28:1046:0:0:0,-8.42884,-10 0/0:99:31:31:1150:0:0:0,-9.33193,-10 0/0:64.3972:17:17:644:0:0:0,-5.11751,-10 0/0:82.4589:23:23:838:0:0:0,-6.92369,-10 0/0:28.2736:5:5:190:0:0:0,-1.50515,-10 0/0:40.3148:9:9:339:0:0:0,-2.70927,-10 0/0:67.4075:18:18:658:0:0:0,-5.41854,-10 0/0:40.3148:9:9:338:0:0:0,-2.70927,-10 0/0:64.3972:17:17:633:0:0:0,-5.11751,-10 0/0:55.3663:14:14:528:0:0:0,-4.21442,-10 0/0:52.356:13:13:493:0:0:0,-3.91339,-10 scaffold_121 1473289 . C T 2190.46 . AB=0.598131;ABP=11.96;AC=7;AF=0.0380435;AN=184;AO=86;CIGAR=1X;DP=1653;DPB=1653;DPRA=1.14116;EPP=3.0103;EPPR=12.7944;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9904;NS=92;NUMALT=1;ODDS=1.04988;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3089;QR=57125;RO=1566;RPP=189.757;RPPR=3223.58;RUN=1;SAF=43;SAP=3.0103;SAR=43;SRF=806;SRP=5.94442;SRR=760;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.2772:15:15:550:0:0:0,-4.51545,-10 0/0:41.236:11:11:405:0:0:0,-3.31133,-10 0/0:50.2669:14:14:509:0:0:0,-4.21442,-10 0/0:44.2463:12:12:413:0:0:0,-3.61236,-10 0/0:41.236:11:11:411:0:0:0,-3.31133,-10 0/0:53.2772:15:15:545:0:0:0,-4.51545,-10 0/0:99:34:34:1272:0:0:0,-10,-10 0/1:99:28:17:616:11:403:-10,0,-10 0/0:23.1742:5:5:189:0:0:0,-1.50515,-10 0/0:23.1742:5:5:190:0:0:0,-1.50515,-10 0/0:20.1639:4:4:145:0:0:0,-1.20412,-10 0/0:38.2257:10:10:376:0:0:0,-3.0103,-10 0/0:92.41:28:28:1032:0:0:0,-8.42884,-10 0/1:99:33:14:522:19:663:-10,0,-10 0/0:83.3803:25:25:898:0:0:0,-7.52575,-10 0/0:62.3081:18:18:630:0:0:0,-5.41854,-10 0/0:95.4193:29:29:1039:0:0:0,-8.72987,-10 0/0:23.1742:5:5:188:0:0:0,-1.50515,-10 0/0:47.2566:13:13:492:0:0:0,-3.91339,-10 0/0:99:36:36:1296:0:0:0,-10,-10 0/0:65.3184:19:19:710:0:0:0,-5.71957,-10 0/0:99:32:32:1202:0:0:0,-9.63296,-10 0/0:32.2051:8:8:265:0:0:0,-2.40824,-10 0/0:74.3493:22:22:809:0:0:0,-6.62266,-10 0/0:59.2978:17:17:600:0:0:0,-5.11751,-10 0/0:77.3595:23:23:867:0:0:0,-6.92369,-10 0/0:56.2875:16:16:583:0:0:0,-4.81648,-10 0/0:56.2875:16:16:554:0:0:0,-4.81648,-10 0/0:44.2463:12:12:456:0:0:0,-3.61236,-10 0/0:99:40:40:1426:0:0:0,-10,-10 0/0:26.1845:6:6:228:0:0:0,-1.80618,-10 0/0:17.1536:3:3:114:0:0:0,-0.90309,-10 0/0:47.2566:13:13:489:0:0:0,-3.91339,-10 0/0:62.3081:18:18:666:0:0:0,-5.41854,-10 0/0:74.3493:22:22:750:0:0:0,-6.62266,-10 0/1:1.01983:10:0:0:10:374:-10,-3.0103,0 0/0:47.2566:13:13:490:0:0:0,-3.91339,-10 0/0:98.4275:30:30:1110:0:0:0,-9.0309,-10 0/0:59.2978:17:17:621:0:0:0,-5.11751,-10 0/0:32.2051:8:8:275:0:0:0,-2.40824,-10 0/0:99:34:34:1262:0:0:0,-10,-10 0/0:50.2669:14:14:526:0:0:0,-4.21442,-10 0/0:53.2772:15:15:555:0:0:0,-4.51545,-10 0/0:99:31:31:1165:0:0:0,-9.33193,-10 0/0:50.2669:14:14:507:0:0:0,-4.21442,-10 0/0:56.2875:16:16:538:0:0:0,-4.81648,-10 0/0:98.4275:30:30:1040:0:0:0,-9.0309,-10 0/0:80.3698:24:24:903:0:0:0,-7.22472,-10 0/0:41.236:11:11:394:0:0:0,-3.31133,-10 0/0:98.4275:30:30:1099:0:0:0,-9.0309,-10 0/0:44.2463:12:12:451:0:0:0,-3.61236,-10 0/0:95.4193:29:29:1048:0:0:0,-8.72987,-10 0/0:44.2463:12:12:455:0:0:0,-3.61236,-10 0/0:17.1536:3:3:113:0:0:0,-0.90309,-10 0/0:98.4275:30:30:1081:0:0:0,-9.0309,-10 0/0:26.5981:14:13:488:1:16:0,-1.46829,-10 0/0:77.3595:23:23:845:0:0:0,-6.92369,-10 0/1:0.48005:9:0:0:9:327:-10,-2.70927,0 1/1:29.0877:21:0:0:21:740:-10,-6.32163,0 0/0:59.2978:17:17:572:0:0:0,-5.11751,-10 0/0:99:31:31:1123:0:0:0,-9.33193,-10 0/0:59.2978:17:17:615:0:0:0,-5.11751,-10 0/0:99:32:32:1157:0:0:0,-9.63296,-10 0/0:86.3902:26:26:935:0:0:0,-7.82678,-10 0/0:38.2257:10:10:380:0:0:0,-3.0103,-10 0/1:99:27:12:449:15:566:-10,0,-10 0/0:38.2257:10:10:364:0:0:0,-3.0103,-10 0/0:23.1742:5:5:183:0:0:0,-1.50515,-10 0/0:99:32:32:1209:0:0:0,-9.63296,-10 0/0:23.1742:5:5:167:0:0:0,-1.50515,-10 0/0:65.3184:19:19:696:0:0:0,-5.71957,-10 0/0:98.4275:30:30:1130:0:0:0,-9.0309,-10 0/0:47.2566:14:13:458:0:0:0,-3.91339,-10 0/0:44.2463:12:12:447:0:0:0,-3.61236,-10 0/0:86.3902:26:26:963:0:0:0,-7.82678,-10 0/0:47.2566:13:13:459:0:0:0,-3.91339,-10 0/0:53.2772:15:15:540:0:0:0,-4.51545,-10 0/0:29.1948:7:7:243:0:0:0,-2.10721,-10 0/0:29.1948:7:7:241:0:0:0,-2.10721,-10 0/0:41.236:11:11:367:0:0:0,-3.31133,-10 0/0:99:33:33:1229:0:0:0,-9.93399,-10 0/0:92.41:28:28:1043:0:0:0,-8.42884,-10 0/0:99:31:31:1118:0:0:0,-9.33193,-10 0/0:59.2978:17:17:645:0:0:0,-5.11751,-10 0/0:77.3595:23:23:790:0:0:0,-6.92369,-10 0/0:23.1742:5:5:190:0:0:0,-1.50515,-10 0/0:38.2257:10:10:357:0:0:0,-3.0103,-10 0/0:65.3184:19:19:675:0:0:0,-5.71957,-10 0/0:35.2154:9:9:342:0:0:0,-2.70927,-10 0/0:59.2978:17:17:635:0:0:0,-5.11751,-10 0/0:50.2669:14:14:507:0:0:0,-4.21442,-10 0/0:47.2566:13:13:493:0:0:0,-3.91339,-10 scaffold_121 1506889 . T C 526.141 . AB=0.814815;ABP=26.2531;AC=2;AF=0.0108696;AN=184;AO=22;CIGAR=1X;DP=1117;DPB=1117;DPRA=1.11468;EPP=3.40511;EPPR=6.51165;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9991;NS=92;NUMALT=1;ODDS=3.02107;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=822;QR=40449;RO=1094;RPP=50.7827;RPPR=2378.6;RUN=1;SAF=12;SAP=3.40511;SAR=10;SRF=568;SRP=6.51165;SRR=526;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:35.2044:8:8:295:0:0:0,-2.40824,-10 0/0:20.1529:3:3:114:0:0:0,-0.90309,-10 0/0:59.2868:16:16:579:0:0:0,-4.81648,-10 0/0:32.1941:7:7:266:0:0:0,-2.10721,-10 0/0:41.225:10:10:380:0:0:0,-3.0103,-10 0/0:23.1632:4:4:152:0:0:0,-1.20412,-10 0/0:62.2971:17:17:623:0:0:0,-5.11751,-10 0/0:62.2971:17:17:618:0:0:0,-5.11751,-10 0/0:35.2044:8:8:293:0:0:0,-2.40824,-10 0/0:17.1426:2:2:76:0:0:0,-0.60206,-7.22 0/0:23.1632:4:4:152:0:0:0,-1.20412,-10 0/0:26.1735:5:5:170:0:0:0,-1.50515,-10 0/0:53.2662:14:14:531:0:0:0,-4.21442,-10 0/0:65.3074:18:18:681:0:0:0,-5.41854,-10 0/0:50.2559:13:13:488:0:0:0,-3.91339,-10 0/0:56.2765:15:15:559:0:0:0,-4.51545,-10 0/0:56.2765:15:15:567:0:0:0,-4.51545,-10 0/0:26.1735:5:5:187:0:0:0,-1.50515,-10 0/0:65.3074:18:18:668:0:0:0,-5.41854,-10 0/0:83.3691:24:24:895:0:0:0,-7.22472,-10 0/0:50.2559:13:13:478:0:0:0,-3.91339,-10 0/0:44.2353:11:11:416:0:0:0,-3.31133,-10 0/0:17.1426:2:2:72:0:0:0,-0.60206,-6.84 0/0:65.3074:18:18:665:0:0:0,-5.41854,-10 0/0:56.2765:15:15:555:0:0:0,-4.51545,-10 0/0:62.2971:17:17:644:0:0:0,-5.11751,-10 0/0:50.2559:13:13:484:0:0:0,-3.91339,-10 0/0:47.2456:12:12:449:0:0:0,-3.61236,-10 0/0:41.225:10:10:375:0:0:0,-3.0103,-10 0/0:92.3997:27:27:1008:0:0:0,-8.12781,-10 0/0:20.1529:3:3:113:0:0:0,-0.90309,-10 0/0:50.2559:13:13:479:0:0:0,-3.91339,-10 0/0:38.2147:9:9:319:0:0:0,-2.70927,-10 0/0:23.1632:4:4:151:0:0:0,-1.20412,-10 0/0:26.1735:5:5:189:0:0:0,-1.50515,-10 0/0:26.1735:5:5:188:0:0:0,-1.50515,-10 0/0:29.1838:6:6:210:0:0:0,-1.80618,-10 0/0:86.3794:25:25:944:0:0:0,-7.52575,-10 0/0:71.328:20:20:750:0:0:0,-6.0206,-10 0/0:32.1941:7:7:266:0:0:0,-2.10721,-10 0/0:65.3074:18:18:679:0:0:0,-5.41854,-10 0/0:53.2662:14:14:516:0:0:0,-4.21442,-10 0/0:44.2353:11:11:400:0:0:0,-3.31133,-10 0/0:89.3896:26:26:946:0:0:0,-7.82678,-10 0/0:44.2353:11:11:417:0:0:0,-3.31133,-10 0/0:50.2559:13:13:480:0:0:0,-3.91339,-10 0/0:92.3997:28:27:1018:0:0:0,-8.12781,-10 0/0:71.328:20:20:758:0:0:0,-6.0206,-10 0/0:44.2353:11:11:400:0:0:0,-3.31133,-10 0/0:71.328:20:20:737:0:0:0,-6.0206,-10 0/0:29.1838:6:6:218:0:0:0,-1.80618,-10 0/0:77.3485:22:22:824:0:0:0,-6.62266,-10 0/0:44.2353:11:11:404:0:0:0,-3.31133,-10 0/0:20.1529:3:3:114:0:0:0,-0.90309,-10 0/0:92.3997:27:27:943:0:0:0,-8.12781,-10 0/0:41.225:10:10:352:0:0:0,-3.0103,-10 0/0:38.2147:9:9:333:0:0:0,-2.70927,-10 0/0:23.1632:4:4:147:0:0:0,-1.20412,-10 0/0:29.1838:6:6:228:0:0:0,-1.80618,-10 0/0:50.2559:13:13:485:0:0:0,-3.91339,-10 0/0:53.2662:14:14:528:0:0:0,-4.21442,-10 0/0:50.2559:13:13:486:0:0:0,-3.91339,-10 0/0:74.3383:21:21:767:0:0:0,-6.32163,-10 0/0:35.2044:8:8:260:0:0:0,-2.40824,-10 0/0:35.2044:8:8:280:0:0:0,-2.40824,-10 0/0:92.3997:27:27:1009:0:0:0,-8.12781,-10 0/0:41.225:10:10:363:0:0:0,-3.0103,-10 0/0:26.1735:5:5:188:0:0:0,-1.50515,-10 0/0:71.328:20:20:736:0:0:0,-6.0206,-10 0/0:35.2044:8:8:299:0:0:0,-2.40824,-10 0/1:0.0125306:12:0:0:12:452:-10,-3.61236,0 0/0:68.3177:19:19:708:0:0:0,-5.71957,-10 0/1:99:15:5:179:10:370:-10,0,-10 0/0:41.225:10:10:380:0:0:0,-3.0103,-10 0/0:50.2559:13:13:480:0:0:0,-3.91339,-10 0/0:32.1941:7:7:263:0:0:0,-2.10721,-10 0/0:26.1735:5:5:190:0:0:0,-1.50515,-10 0/0:32.1941:7:7:235:0:0:0,-2.10721,-10 0/0:20.1529:3:3:113:0:0:0,-0.90309,-10 0/0:23.1632:4:4:150:0:0:0,-1.20412,-10 0/0:89.3896:26:26:932:0:0:0,-7.82678,-10 0/0:65.3074:18:18:678:0:0:0,-5.41854,-10 0/0:86.3794:25:25:914:0:0:0,-7.52575,-10 0/0:47.2456:12:12:454:0:0:0,-3.61236,-10 0/0:56.2765:15:15:537:0:0:0,-4.51545,-10 0/0:14.1323:1:1:38:0:0:0,-0.30103,-3.8 0/0:59.2868:16:16:592:0:0:0,-4.81648,-10 0/0:32.1941:7:7:264:0:0:0,-2.10721,-10 0/0:14.1323:1:1:38:0:0:0,-0.30103,-3.8 0/0:35.2044:8:8:299:0:0:0,-2.40824,-10 0/0:50.2559:13:13:451:0:0:0,-3.91339,-10 0/0:26.1735:5:5:190:0:0:0,-1.50515,-10 scaffold_121 1506940 . A G 508.785 . AB=0.814815;ABP=26.2531;AC=2;AF=0.0108696;AN=184;AO=22;CIGAR=1X;DP=1116;DPB=1116;DPRA=1.1157;EPP=3.40511;EPPR=4.35454;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=3.01006;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=803;QR=40478;RO=1092;RPP=50.7827;RPPR=2374.26;RUN=1;SAF=12;SAP=3.40511;SAR=10;SRF=559;SRP=4.35454;SRR=533;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:35.1719:8:8:304:0:0:0,-2.40824,-10 0/0:20.1204:3:3:114:0:0:0,-0.90309,-10 0/0:59.2543:16:16:603:0:0:0,-4.81648,-10 0/0:32.1616:7:7:264:0:0:0,-2.10721,-10 0/0:41.1925:10:10:367:0:0:0,-3.0103,-10 0/0:23.1307:4:4:152:0:0:0,-1.20412,-10 0/0:59.2543:16:16:604:0:0:0,-4.81648,-10 0/0:62.2646:17:17:615:0:0:0,-5.11751,-10 0/0:35.1719:8:8:289:0:0:0,-2.40824,-10 0/0:17.1101:2:2:76:0:0:0,-0.60206,-7.22 0/0:23.1307:4:4:152:0:0:0,-1.20412,-10 0/0:26.141:5:5:189:0:0:0,-1.50515,-10 0/0:53.2337:14:14:498:0:0:0,-4.21442,-10 0/0:65.2749:18:18:679:0:0:0,-5.41854,-10 0/0:50.2234:13:13:483:0:0:0,-3.91339,-10 0/0:53.2337:15:14:507:0:0:0,-4.21442,-10 0/0:56.244:15:15:570:0:0:0,-4.51545,-10 0/0:26.141:5:5:188:0:0:0,-1.50515,-10 0/0:65.2749:18:18:675:0:0:0,-5.41854,-10 0/0:83.3367:24:24:910:0:0:0,-7.22472,-10 0/0:50.2234:13:13:478:0:0:0,-3.91339,-10 0/0:44.2028:11:11:418:0:0:0,-3.31133,-10 0/0:17.1101:2:2:76:0:0:0,-0.60206,-7.22 0/0:65.2749:18:18:675:0:0:0,-5.41854,-10 0/0:59.2543:16:16:583:0:0:0,-4.81648,-10 0/0:59.2543:16:16:608:0:0:0,-4.81648,-10 0/0:50.2234:13:13:488:0:0:0,-3.91339,-10 0/0:47.2131:12:12:442:0:0:0,-3.61236,-10 0/0:41.1925:10:10:380:0:0:0,-3.0103,-10 0/0:92.3672:27:27:986:0:0:0,-8.12781,-10 0/0:20.1204:3:3:103:0:0:0,-0.90309,-9.61333 0/0:50.2234:13:13:470:0:0:0,-3.91339,-10 0/0:41.1925:10:10:358:0:0:0,-3.0103,-10 0/0:23.1307:4:4:151:0:0:0,-1.20412,-10 0/0:26.141:5:5:186:0:0:0,-1.50515,-10 0/0:26.141:5:5:189:0:0:0,-1.50515,-10 0/0:26.141:5:5:188:0:0:0,-1.50515,-10 0/0:86.3469:25:25:943:0:0:0,-7.52575,-10 0/0:71.2955:20:20:756:0:0:0,-6.0206,-10 0/0:32.1616:7:7:266:0:0:0,-2.10721,-10 0/0:65.2749:18:18:680:0:0:0,-5.41854,-10 0/0:53.2337:14:14:515:0:0:0,-4.21442,-10 0/0:44.2028:11:11:404:0:0:0,-3.31133,-10 0/0:92.3672:27:27:956:0:0:0,-8.12781,-10 0/0:44.2028:11:11:395:0:0:0,-3.31133,-10 0/0:50.2234:13:13:485:0:0:0,-3.91339,-10 0/0:95.3771:29:28:1027:0:0:0,-8.42884,-10 0/0:74.3058:21:21:770:0:0:0,-6.32163,-10 0/0:41.1925:10:10:378:0:0:0,-3.0103,-10 0/0:71.2955:20:20:731:0:0:0,-6.0206,-10 0/0:29.1513:6:6:228:0:0:0,-1.80618,-10 0/0:77.3161:22:22:834:0:0:0,-6.62266,-10 0/0:44.2028:11:11:418:0:0:0,-3.31133,-10 0/0:20.1204:3:3:111:0:0:0,-0.90309,-10 0/0:86.3469:25:25:896:0:0:0,-7.52575,-10 0/0:38.1822:9:9:310:0:0:0,-2.70927,-10 0/0:38.1822:9:9:338:0:0:0,-2.70927,-10 0/0:23.1307:4:4:152:0:0:0,-1.20412,-10 0/0:29.1513:6:6:228:0:0:0,-1.80618,-10 0/0:50.2234:13:13:494:0:0:0,-3.91339,-10 0/0:56.244:15:15:568:0:0:0,-4.51545,-10 0/0:50.2234:13:13:487:0:0:0,-3.91339,-10 0/0:74.3058:21:21:777:0:0:0,-6.32163,-10 0/0:35.1719:8:8:303:0:0:0,-2.40824,-10 0/0:35.1719:8:8:302:0:0:0,-2.40824,-10 0/0:92.3672:27:27:976:0:0:0,-8.12781,-10 0/0:41.1925:10:10:354:0:0:0,-3.0103,-10 0/0:26.141:5:5:190:0:0:0,-1.50515,-10 0/0:71.2955:20:20:740:0:0:0,-6.0206,-10 0/0:35.1719:8:8:302:0:0:0,-2.40824,-10 0/1:0.0126246:12:0:0:12:454:-10,-3.61236,0 0/0:71.2955:20:20:739:0:0:0,-6.0206,-10 0/1:99:15:5:164:10:349:-10,0,-10 0/0:41.1925:10:10:376:0:0:0,-3.0103,-10 0/0:50.2234:13:13:488:0:0:0,-3.91339,-10 0/0:32.1616:7:7:261:0:0:0,-2.10721,-10 0/0:26.141:5:5:188:0:0:0,-1.50515,-10 0/0:32.1616:7:7:264:0:0:0,-2.10721,-10 0/0:20.1204:3:3:114:0:0:0,-0.90309,-10 0/0:23.1307:4:4:150:0:0:0,-1.20412,-10 0/0:89.3571:26:26:951:0:0:0,-7.82678,-10 0/0:62.2646:17:17:644:0:0:0,-5.11751,-10 0/0:86.3469:25:25:910:0:0:0,-7.52575,-10 0/0:47.2131:12:12:444:0:0:0,-3.61236,-10 0/0:56.244:15:15:534:0:0:0,-4.51545,-10 0/0:14.0998:1:1:38:0:0:0,-0.30103,-3.8 0/0:59.2543:16:16:603:0:0:0,-4.81648,-10 0/0:32.1616:7:7:263:0:0:0,-2.10721,-10 0/0:14.0998:1:1:38:0:0:0,-0.30103,-3.8 0/0:35.1719:8:8:302:0:0:0,-2.40824,-10 0/0:50.2234:13:13:486:0:0:0,-3.91339,-10 0/0:26.141:5:5:189:0:0:0,-1.50515,-10 scaffold_121 1567730 . C T 802.519 . AB=0.491803;ABP=3.0459;AC=2;AF=0.0108696;AN=184;AO=31;CIGAR=1X;DP=2016;DPB=2016;DPRA=1.20995;EPP=8.68415;EPPR=7.49334;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9526;NS=92;NUMALT=1;ODDS=4.77345;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1170;QR=72466;RO=1984;RPP=70.3259;RPPR=4285.19;RUN=1;SAF=11;SAP=8.68415;SAR=20;SRF=957;SRP=8.37331;SRR=1027;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:86.6135:23:23:865:0:0:0,-6.92369,-10 0/0:47.4801:10:10:340:0:0:0,-3.0103,-10 0/0:77.583:20:20:759:0:0:0,-6.0206,-10 0/0:56.511:13:13:489:0:0:0,-3.91339,-10 0/0:41.4595:8:8:303:0:0:0,-2.40824,-10 0/0:29.4183:4:4:148:0:0:0,-1.20412,-10 0/0:99:45:45:1621:0:0:0,-10,-10 0/1:99:21:10:379:11:417:-10,0,-10 0/0:68.5522:17:17:641:0:0:0,-5.11751,-10 0/0:35.4389:6:6:206:0:0:0,-1.80618,-10 0/0:47.4801:10:10:357:0:0:0,-3.0103,-10 0/0:38.4492:7:7:264:0:0:0,-2.10721,-10 0/0:99:34:34:1208:0:0:0,-10,-10 0/0:99:43:43:1539:0:0:0,-10,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:98.6478:27:27:988:0:0:0,-8.12781,-10 0/0:99:31:31:1068:0:0:0,-9.33193,-10 0/0:38.4492:7:7:235:0:0:0,-2.10721,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:99:43:43:1488:0:0:0,-10,-10 0/0:65.5419:16:16:575:0:0:0,-4.81648,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:53.5007:12:12:448:0:0:0,-3.61236,-10 0/0:77.583:20:20:731:0:0:0,-6.0206,-10 0/0:99:35:35:1266:0:0:0,-10,-10 0/0:99:49:49:1795:0:0:0,-10,-10 0/0:74.5727:19:19:694:0:0:0,-5.71957,-10 0/0:44.4698:9:9:323:0:0:0,-2.70927,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:99:32:32:1151:0:0:0,-9.63296,-10 0/0:50.4904:11:11:403:0:0:0,-3.31133,-10 0/0:47.4801:10:10:378:0:0:0,-3.0103,-10 0/0:65.5419:16:16:592:0:0:0,-4.81648,-10 0/0:62.5316:15:15:552:0:0:0,-4.51545,-10 0/0:65.5419:16:16:597:0:0:0,-4.81648,-10 0/0:38.4492:7:7:263:0:0:0,-2.10721,-10 0/0:86.6135:23:23:811:0:0:0,-6.92369,-10 0/0:99:30:30:1099:0:0:0,-9.0309,-10 0/0:68.5522:17:17:624:0:0:0,-5.11751,-10 0/0:80.5932:21:21:764:0:0:0,-6.32163,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:99:30:30:1138:0:0:0,-9.0309,-10 0/0:80.5932:21:21:796:0:0:0,-6.32163,-10 0/0:99:35:35:1287:0:0:0,-10,-10 0/0:95.6448:26:26:940:0:0:0,-7.82678,-10 0/0:68.5522:17:17:619:0:0:0,-5.11751,-10 0/0:99:46:46:1682:0:0:0,-10,-10 0/0:98.6478:27:27:1011:0:0:0,-8.12781,-10 0/0:74.5727:19:19:686:0:0:0,-5.71957,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:68.5522:17:17:638:0:0:0,-5.11751,-10 0/0:99:44:44:1547:0:0:0,-10,-10 0/0:68.5522:17:17:631:0:0:0,-5.11751,-10 0/0:29.4183:4:4:151:0:0:0,-1.20412,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:59.5213:14:14:488:0:0:0,-4.21442,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:32.4286:5:5:178:0:0:0,-1.50515,-10 0/0:98.6478:27:27:1003:0:0:0,-8.12781,-10 0/0:38.4492:7:7:243:0:0:0,-2.10721,-10 0/0:95.6448:26:26:975:0:0:0,-7.82678,-10 0/0:98.6478:27:27:1002:0:0:0,-8.12781,-10 0/0:99:34:34:1231:0:0:0,-10,-10 0/0:95.6448:26:26:960:0:0:0,-7.82678,-10 0/0:68.5522:17:17:635:0:0:0,-5.11751,-10 0/1:99:40:21:746:19:715:-10,0,-10 0/0:77.583:20:20:749:0:0:0,-6.0206,-10 0/0:62.5316:15:15:512:0:0:0,-4.51545,-10 0/0:99:29:29:1023:0:0:0,-8.72987,-10 0/0:68.5522:17:17:588:0:0:0,-5.11751,-10 0/0:74.5727:19:19:696:0:0:0,-5.71957,-10 0/0:99:39:39:1423:0:0:0,-10,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:62.5316:15:15:547:0:0:0,-4.51545,-10 0/0:98.6478:27:27:959:0:0:0,-8.12781,-10 0/0:20.7891:18:17:634:1:38:0,-0.363267,-10 0/0:56.511:13:13:462:0:0:0,-3.91339,-10 0/0:77.583:20:20:697:0:0:0,-6.0206,-10 0/0:35.4389:6:6:228:0:0:0,-1.80618,-10 0/0:38.4492:7:7:245:0:0:0,-2.10721,-10 0/0:99:31:31:1158:0:0:0,-9.33193,-10 0/0:99:40:40:1473:0:0:0,-10,-10 0/0:98.6478:27:27:1019:0:0:0,-8.12781,-10 0/0:53.5007:12:12:454:0:0:0,-3.61236,-10 0/0:98.6478:28:27:1022:0:0:0,-8.12781,-10 0/0:32.4286:5:5:168:0:0:0,-1.50515,-10 0/0:56.511:13:13:487:0:0:0,-3.91339,-10 0/0:50.4904:11:11:406:0:0:0,-3.31133,-10 0/0:41.4595:8:8:303:0:0:0,-2.40824,-10 0/0:71.5624:18:18:652:0:0:0,-5.41854,-10 0/0:77.583:20:20:750:0:0:0,-6.0206,-10 0/0:68.5522:17:17:640:0:0:0,-5.11751,-10 scaffold_121 1614730 . T A 23531.6 . AB=0.570732;ABP=20.827;AC=87;AF=0.472826;AN=184;AO=810;CIGAR=1X;DP=1753;DPB=1753;DPRA=0.94815;EPP=8.20039;EPPR=18.1829;GTI=3;LEN=1;MEANALT=1.03774;MQM=60;MQMR=59.9436;NS=92;NUMALT=1;ODDS=0.446831;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=29849;QR=34641;RO=939;RPP=1701.63;RPPR=1964.6;RUN=1;SAF=434;SAP=12.0286;SAR=376;SRF=436;SRP=13.3913;SRR=503;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:38.891:15:0:0:15:558:-10,-4.51545,0 1/1:50.9322:19:0:0:19:695:-10,-5.71957,0 0/1:99:19:6:228:12:452:-10,0,-10 1/1:35.8807:14:0:0:14:506:-10,-4.21442,0 1/1:41.9013:16:0:0:16:573:-10,-4.81648,0 1/1:8.78799:5:0:0:5:168:-10,-1.50515,0 0/0:92.1604:31:31:1116:0:0:0,-9.33193,-10 0/1:99:25:12:421:13:485:-10,0,-10 1/1:32.8704:13:0:0:13:489:-10,-3.91339,0 1/1:11.7983:6:0:0:6:224:-10,-1.80618,0 1/1:14.8086:7:0:0:7:266:-10,-2.10721,0 1/1:17.8189:8:0:0:8:300:-10,-2.40824,0 1/1:99:37:0:0:37:1335:-10,-10,0 1/1:75.0146:27:0:0:27:978:-10,-8.12781,0 0/0:56.039:19:19:722:0:0:0,-5.71957,-10 1/1:59.9631:22:0:0:22:809:-10,-6.62266,0 0/1:99:27:12:456:15:569:-10,0,-10 1/1:35.8807:14:0:0:14:509:-10,-4.21442,0 1/1:75.0146:27:0:0:27:1014:-10,-8.12781,0 0/0:89.1512:30:30:1125:0:0:0,-9.0309,-10 0/0:65.0699:22:22:812:0:0:0,-6.62266,-10 0/0:65.0699:22:22:811:0:0:0,-6.62266,-10 0/0:40.9875:14:14:509:0:0:0,-4.21442,-10 0/1:99:20:8:295:12:454:-10,0,-10 1/1:32.8287:22:1:16:21:764:-10,-3.68024,0 0/0:65.0699:22:22:832:0:0:0,-6.62266,-10 1/1:44.9116:17:0:0:17:622:-10,-5.11751,0 1/1:32.8704:13:0:0:13:490:-10,-3.91339,0 0/0:53.0287:18:18:679:0:0:0,-5.41854,-10 0/1:99:31:20:749:11:402:-10,0,-10 0/0:19.9154:7:7:248:0:0:0,-2.10721,-10 0/1:0.518992:4:0:0:4:152:-10,-1.20412,0 0/0:59.0493:20:20:734:0:0:0,-6.0206,-10 0/0:40.9875:14:14:520:0:0:0,-4.21442,-10 0/0:65.0699:22:22:800:0:0:0,-6.62266,-10 0/0:47.0081:16:16:603:0:0:0,-4.81648,-10 0/0:31.9566:11:11:399:0:0:0,-3.31133,-10 0/0:99:35:35:1308:0:0:0,-10,-10 0/0:34.9669:12:12:455:0:0:0,-3.61236,-10 0/0:43.9978:15:15:566:0:0:0,-4.51545,-10 0/1:99:30:11:416:19:654:-10,0,-10 0/0:37.9772:14:13:492:0:0:0,-3.91339,-10 0/0:43.9978:15:15:504:0:0:0,-4.51545,-10 0/0:95.1717:32:32:1186:0:0:0,-9.63296,-10 0/0:62.0596:21:21:781:0:0:0,-6.32163,-10 0/0:28.9463:10:10:371:0:0:0,-3.0103,-10 0/0:99:39:39:1472:0:0:0,-10,-10 0/0:56.039:19:19:715:0:0:0,-5.71957,-10 0/0:47.0081:16:16:608:0:0:0,-4.81648,-10 0/1:99:30:13:483:17:591:-10,0,-10 0/0:31.9566:11:11:401:0:0:0,-3.31133,-10 0/1:99:41:17:601:24:904:-10,0,-10 1/1:20.8292:9:0:0:9:342:-10,-2.70927,0 0/0:16.9051:6:6:226:0:0:0,-1.80618,-10 0/0:99:45:44:1643:0:0:0,-10,-10 0/1:24.0053:13:12:434:1:38:-1.00055,0,-10 0/0:56.039:19:19:690:0:0:0,-5.71957,-10 1/1:26.8498:11:0:0:11:418:-10,-3.31133,0 1/1:53.9425:20:0:0:20:756:-10,-6.0206,0 0/0:31.9566:11:11:409:0:0:0,-3.31133,-10 1/1:84.0454:30:0:0:30:1085:-10,-9.0309,0 0/0:65.0699:22:22:835:0:0:0,-6.62266,-10 0/1:99:26:8:279:18:637:-10,0,-10 1/1:47.9219:18:0:0:18:679:-10,-5.41854,0 1/1:23.8395:10:0:0:10:371:-10,-3.0103,0 0/1:99:26:10:380:16:606:-10,0,-10 0/1:99:18:12:409:6:206:-10,0,-10 1/1:35.8807:14:0:0:14:519:-10,-4.21442,0 0/1:99:34:16:607:18:669:-10,0,-10 1/1:26.8498:11:0:0:11:395:-10,-3.31133,0 0/0:62.0596:21:21:773:0:0:0,-6.32163,-10 0/0:83.1316:28:28:1053:0:0:0,-8.42884,-10 0/0:47.0081:16:16:579:0:0:0,-4.81648,-10 0/0:10.8845:4:4:151:0:0:0,-1.20412,-10 0/0:92.1604:31:31:1103:0:0:0,-9.33193,-10 0/1:31.8262:12:1:38:11:401:-10,0,-1.26682 1/1:50.9322:19:0:0:19:713:-10,-5.71957,0 1/1:35.8807:14:0:0:14:528:-10,-4.21442,0 0/1:0.518992:4:0:0:4:152:-10,-1.20412,0 1/1:29.8601:12:0:0:12:456:-10,-3.61236,0 1/1:96.0852:34:0:0:34:1264:-10,-10,0 1/1:90.0657:32:0:0:32:1188:-10,-9.63296,0 0/1:99:27:11:408:15:549:-10,0,-10 1/1:47.9219:18:0:0:18:679:-10,-5.41854,0 1/1:35.8807:14:0:0:14:524:-10,-4.21442,0 1/1:11.7983:6:0:0:6:223:-10,-1.80618,0 0/0:56.039:19:19:691:0:0:0,-5.71957,-10 0/0:50.0184:17:17:640:0:0:0,-5.11751,-10 0/1:0.518992:4:0:0:4:140:-10,-1.20412,0 0/1:99:19:5:183:14:532:-10,0,-10 1/1:62.9734:23:0:0:23:816:-10,-6.92369,0 0/0:59.0493:20:20:676:0:0:0,-6.0206,-10 scaffold_121 1701843 . T C 2564.31 . AB=0.612903;ABP=6.44263;AC=6;AF=0.0326087;AN=184;AO=97;CIGAR=1X;DP=2018;DPB=2018;DPRA=1.67751;EPP=4.10723;EPPR=4.73141;GTI=1;LEN=1;MEANALT=1;MQM=59.9381;MQMR=59.9875;NS=92;NUMALT=1;ODDS=0.893959;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3510;QR=70621;RO=1919;RPP=213.643;RPPR=4170.07;RUN=1;SAF=52;SAP=4.10723;SAR=45;SRF=979;SRP=4.73141;SRR=940;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.1087:16:16:577:0:0:0,-4.81648,-10 0/0:23.0366:9:9:340:0:0:0,-2.70927,-10 0/0:62.1705:22:22:781:0:0:0,-6.62266,-10 0/0:29.0572:11:11:411:0:0:0,-3.31133,-10 0/0:17.016:7:7:241:0:0:0,-2.10721,-10 0/0:32.0675:12:12:444:0:0:0,-3.61236,-10 0/0:99:46:46:1700:0:0:0,-10,-10 0/0:89.2627:31:31:1151:0:0:0,-9.33193,-10 0/0:38.0881:14:14:494:0:0:0,-4.21442,-10 0/0:7.98514:4:4:149:0:0:0,-1.20412,-10 0/0:14.0057:6:6:223:0:0:0,-1.80618,-10 0/0:26.0469:10:10:380:0:0:0,-3.0103,-10 0/0:89.2627:31:31:1112:0:0:0,-9.33193,-10 0/0:99:41:41:1540:0:0:0,-10,-10 0/0:44.1087:16:16:555:0:0:0,-4.81648,-10 0/0:56.1499:20:20:734:0:0:0,-6.0206,-10 0/0:65.1808:23:23:839:0:0:0,-6.92369,-10 0/0:17.016:7:7:266:0:0:0,-2.10721,-10 0/0:92.2724:33:32:1150:0:0:0,-9.63296,-10 0/0:99:56:56:2082:0:0:0,-10,-10 0/0:53.1396:19:19:705:0:0:0,-5.71957,-10 0/0:99:35:35:1297:0:0:0,-10,-10 0/0:14.0057:6:6:228:0:0:0,-1.80618,-10 0/0:74.2117:26:26:964:0:0:0,-7.82678,-10 0/0:83.2425:29:29:1068:0:0:0,-8.72987,-10 0/0:99:35:35:1285:0:0:0,-10,-10 0/0:53.1396:19:19:720:0:0:0,-5.71957,-10 0/0:29.0572:11:11:385:0:0:0,-3.31133,-10 0/0:74.2117:26:26:959:0:0:0,-7.82678,-10 0/0:80.2323:28:28:1048:0:0:0,-8.42884,-10 0/0:20.0263:8:8:304:0:0:0,-2.40824,-10 0/0:20.0263:8:8:304:0:0:0,-2.40824,-10 0/0:56.1499:20:20:725:0:0:0,-6.0206,-10 0/0:35.0778:13:13:421:0:0:0,-3.91339,-10 0/0:59.1602:21:21:781:0:0:0,-6.32163,-10 0/0:23.0366:9:9:328:0:0:0,-2.70927,-10 0/0:26.0469:10:10:377:0:0:0,-3.0103,-10 0/0:99:45:45:1683:0:0:0,-10,-10 0/0:56.1499:20:20:726:0:0:0,-6.0206,-10 0/0:38.0881:14:14:499:0:0:0,-4.21442,-10 0/0:89.2627:31:31:1169:0:0:0,-9.33193,-10 0/0:32.0675:12:12:456:0:0:0,-3.61236,-10 0/0:74.2117:26:26:975:0:0:0,-7.82678,-10 0/0:99:37:37:1341:0:0:0,-10,-10 0/0:99:35:35:1322:0:0:0,-10,-10 0/0:35.0778:13:13:468:0:0:0,-3.91339,-10 0/0:99:45:45:1656:0:0:0,-10,-10 0/0:80.2323:28:28:1023:0:0:0,-8.42884,-10 0/0:35.0778:13:13:448:0:0:0,-3.91339,-10 0/0:99:45:45:1577:0:0:0,-10,-10 0/0:38.0881:14:14:519:0:0:0,-4.21442,-10 0/0:99:45:45:1672:0:0:0,-10,-10 0/0:41.0984:15:15:570:0:0:0,-4.51545,-10 0/0:35.0778:13:13:466:0:0:0,-3.91339,-10 0/0:99:40:40:1467:0:0:0,-10,-10 0/0:62.1705:22:22:802:0:0:0,-6.62266,-10 0/0:83.2425:29:29:1061:0:0:0,-8.72987,-10 0/0:17.016:7:7:262:0:0:0,-2.10721,-10 0/0:32.0675:12:12:456:0:0:0,-3.61236,-10 0/0:23.0366:9:9:337:0:0:0,-2.70927,-10 0/0:89.2627:31:31:1102:0:0:0,-9.33193,-10 0/0:41.0984:15:15:570:0:0:0,-4.51545,-10 0/0:99:41:41:1466:0:0:0,-10,-10 0/0:53.1396:19:19:698:0:0:0,-5.71957,-10 0/0:44.1087:16:16:576:0:0:0,-4.81648,-10 0/0:86.2526:30:30:1073:0:0:0,-9.0309,-10 0/0:44.1087:16:16:606:0:0:0,-4.81648,-10 0/0:47.119:17:17:595:0:0:0,-5.11751,-10 0/0:99:42:42:1564:0:0:0,-10,-10 0/0:29.0572:11:11:415:0:0:0,-3.31133,-10 0/0:65.1808:23:23:869:0:0:0,-6.92369,-10 1/1:99:44:0:0:44:1629:-10,-10,0 1/1:79.0857:34:0:0:34:1197:-10,-10,0 0/0:53.1396:19:19:700:0:0:0,-5.71957,-10 0/1:99:31:12:455:19:684:-10,0,-10 0/0:65.1808:23:23:869:0:0:0,-6.92369,-10 0/0:20.0263:8:8:282:0:0:0,-2.40824,-10 0/0:41.0984:15:15:570:0:0:0,-4.51545,-10 0/1:0.0711213:3:3:113:0:0:0,-0.90309,-10 0/0:35.0778:13:13:493:0:0:0,-3.91339,-10 0/0:99:44:44:1651:0:0:0,-10,-10 0/0:83.2425:29:29:1077:0:0:0,-8.72987,-10 0/0:80.2323:28:28:1013:0:0:0,-8.42884,-10 0/0:65.1808:23:23:850:0:0:0,-6.92369,-10 0/0:99:38:38:1385:0:0:0,-10,-10 0/0:7.98514:4:4:152:0:0:0,-1.20412,-10 0/0:56.1499:20:20:757:0:0:0,-6.0206,-10 0/0:53.1396:19:19:719:0:0:0,-5.71957,-10 0/0:10.9954:5:5:190:0:0:0,-1.50515,-10 0/0:59.1602:22:21:785:0:0:0,-6.32163,-10 0/0:35.0778:13:13:479:0:0:0,-3.91339,-10 0/0:38.0881:14:14:524:0:0:0,-4.21442,-10 scaffold_121 2059098 . T C 7768.14 . AB=0.503546;ABP=3.0411;AC=34;AF=0.184783;AN=184;AO=283;CIGAR=1X;DP=1457;DPB=1457;DPRA=1.17846;EPP=3.38628;EPPR=4.26279;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9923;NS=92;NUMALT=1;ODDS=0.712671;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10360;QR=42766;RO=1172;RPP=600.288;RPPR=2478.96;RUN=1;SAF=140;SAP=3.07936;SAR=143;SRF=607;SRP=6.27863;SRR=565;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.5684:22:22:784:0:0:0,-6.62266,-10 0/0:36.4448:10:10:356:0:0:0,-3.0103,-10 0/0:48.486:14:14:517:0:0:0,-4.21442,-10 0/0:39.4551:11:11:416:0:0:0,-3.31133,-10 0/0:33.4345:9:9:337:0:0:0,-2.70927,-10 0/0:12.3624:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:90.6286:28:28:986:0:0:0,-8.42884,-10 0/0:42.4654:12:12:443:0:0:0,-3.61236,-10 0/0:9.35206:1:1:38:0:0:0,-0.30103,-3.8 0/0:24.4036:6:6:217:0:0:0,-1.80618,-10 0/0:18.383:4:4:151:0:0:0,-1.20412,-10 0/0:75.5787:23:23:843:0:0:0,-6.92369,-10 0/0:93.6373:29:29:1057:0:0:0,-8.72987,-10 0/0:63.5375:19:19:722:0:0:0,-5.71957,-10 0/0:75.5787:23:23:849:0:0:0,-6.92369,-10 0/0:45.4757:13:13:461:0:0:0,-3.91339,-10 0/0:33.4345:9:9:330:0:0:0,-2.70927,-10 0/0:39.4551:11:11:413:0:0:0,-3.31133,-10 0/1:99:35:22:820:13:475:-10,0,-10 0/1:99:13:5:164:8:302:-10,0,-10 0/1:99:24:11:410:13:494:-10,0,-10 1/1:14.2374:10:0:0:10:379:-10,-3.0103,0 0/1:99:9:3:114:6:228:-10,0,-9.85501 0/0:51.4963:15:15:570:0:0:0,-4.51545,-10 0/1:99:20:14:501:6:228:-10,0,-10 0/0:42.4654:12:12:429:0:0:0,-3.61236,-10 0/0:27.4139:7:7:263:0:0:0,-2.10721,-10 1/1:44.3404:20:0:0:20:695:-10,-6.0206,0 0/0:87.6191:27:27:974:0:0:0,-8.12781,-10 0/0:12.3624:2:2:71:0:0:0,-0.60206,-6.745 0/0:39.4551:11:11:368:0:0:0,-3.31133,-10 1/1:32.2992:16:0:0:16:605:-10,-4.81648,0 1/1:8.21677:8:0:0:8:304:-10,-2.40824,0 0/0:57.5169:17:17:592:0:0:0,-5.11751,-10 0/0:33.4345:9:9:321:0:0:0,-2.70927,-10 1/1:17.2477:11:0:0:11:395:-10,-3.31133,0 0/0:57.5169:18:17:631:0:0:0,-5.11751,-10 0/0:51.4963:15:15:552:0:0:0,-4.51545,-10 0/1:99:11:5:185:6:228:-10,0,-10 0/1:99:29:13:446:16:549:-10,0,-10 0/0:54.5066:16:16:589:0:0:0,-4.81648,-10 0/0:60.5272:18:18:658:0:0:0,-5.41854,-10 0/1:99:27:16:590:11:405:-10,0,-10 0/1:99:15:7:253:8:304:-10,0,-10 0/1:99:19:6:194:13:471:-10,0,-10 0/1:99:28:15:556:13:484:-10,0,-10 1/1:44.3404:20:0:0:20:724:-10,-6.0206,0 0/1:0.372541:6:0:0:6:204:-10,-1.80618,0 0/0:99:31:31:1132:0:0:0,-9.33193,-10 0/0:24.4036:6:6:225:0:0:0,-1.80618,-10 0/1:99:18:12:440:6:195:-10,0,-10 0/0:36.4448:10:10:338:0:0:0,-3.0103,-10 0/0:18.383:4:4:130:0:0:0,-1.20412,-10 0/1:99:28:11:391:17:643:-10,0,-10 1/1:17.2477:11:0:0:11:405:-10,-3.31133,0 1/1:17.2477:11:0:0:11:411:-10,-3.31133,0 0/0:24.4036:6:6:221:0:0:0,-1.80618,-10 0/0:72.5684:22:22:792:0:0:0,-6.62266,-10 0/0:36.4448:10:10:358:0:0:0,-3.0103,-10 0/0:35.1895:23:22:833:1:30:0,-2.56196,-10 0/0:45.4757:13:13:489:0:0:0,-3.91339,-10 0/0:99:37:37:1392:0:0:0,-10,-10 0/0:60.5272:18:18:681:0:0:0,-5.41854,-10 0/0:12.3624:2:2:76:0:0:0,-0.60206,-7.22 0/0:90.6286:28:28:1013:0:0:0,-8.42884,-10 0/0:48.486:14:14:522:0:0:0,-4.21442,-10 0/0:30.4242:8:8:291:0:0:0,-2.40824,-10 0/0:78.5889:24:24:874:0:0:0,-7.22472,-10 0/0:33.4345:9:9:333:0:0:0,-2.70927,-10 0/0:57.5169:17:17:630:0:0:0,-5.11751,-10 0/0:84.6092:26:26:980:0:0:0,-7.82678,-10 0/0:87.6191:27:27:984:0:0:0,-8.12781,-10 0/0:48.486:14:14:528:0:0:0,-4.21442,-10 0/0:81.5992:25:25:901:0:0:0,-7.52575,-10 0/0:24.4036:7:6:227:0:0:0,-1.80618,-10 0/0:36.4448:10:10:371:0:0:0,-3.0103,-10 0/0:45.4757:13:13:476:0:0:0,-3.91339,-10 0/0:30.4242:8:8:304:0:0:0,-2.40824,-10 0/0:30.4242:8:8:287:0:0:0,-2.40824,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:84.6092:26:26:929:0:0:0,-7.82678,-10 0/0:57.5169:17:17:619:0:0:0,-5.11751,-10 0/0:60.5272:18:18:627:0:0:0,-5.41854,-10 0/0:69.5581:21:21:739:0:0:0,-6.32163,-10 0/0:18.383:4:4:147:0:0:0,-1.20412,-10 1/1:35.3095:17:0:0:17:606:-10,-5.11751,0 1/1:32.2992:16:0:0:16:596:-10,-4.81648,0 0/0:21.3933:5:5:190:0:0:0,-1.50515,-10 0/0:63.5375:19:19:716:0:0:0,-5.71957,-10 0/0:54.5066:16:16:554:0:0:0,-4.81648,-10 0/0:42.4654:12:12:421:0:0:0,-3.61236,-10 scaffold_121 2074076 . T C 1269.27 . AB=0.3125;ABP=12.7819;AC=3;AF=0.0163043;AN=184;AO=50;CIGAR=1X;DP=1890;DPB=1890;DPRA=1.78218;EPP=7.35324;EPPR=3.05279;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9375;NS=92;NUMALT=1;ODDS=1.30709;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1813;QR=67569;RO=1840;RPP=111.584;RPPR=3998.52;RUN=1;SAF=20;SAP=7.35324;SAR=30;SRF=917;SRP=3.05279;SRR=923;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.6444:20:20:704:0:0:0,-6.0206,-10 0/0:41.5826:14:14:507:0:0:0,-4.21442,-10 0/0:71.6856:24:24:904:0:0:0,-7.22472,-10 0/0:20.5105:7:7:253:0:0:0,-2.10721,-10 0/0:17.5002:6:6:226:0:0:0,-1.80618,-10 0/0:44.5929:15:15:559:0:0:0,-4.51545,-10 1/1:94.1423:40:0:0:40:1470:-10,-10,0 0/0:86.7368:29:29:1010:0:0:0,-8.72987,-10 0/0:35.562:12:12:436:0:0:0,-3.61236,-10 0/0:11.4796:4:4:151:0:0:0,-1.20412,-10 0/0:29.5414:10:10:366:0:0:0,-3.0103,-10 0/0:20.5105:7:7:242:0:0:0,-2.10721,-10 0/0:99:39:39:1420:0:0:0,-10,-10 0/0:99:36:36:1324:0:0:0,-10,-10 0/0:74.6959:25:25:902:0:0:0,-7.52575,-10 0/0:89.7469:30:30:1083:0:0:0,-9.0309,-10 0/1:99:32:22:815:10:343:-10,0,-10 0/0:38.5723:13:13:470:0:0:0,-3.91339,-10 0/0:68.6753:23:23:839:0:0:0,-6.92369,-10 0/0:99:46:46:1662:0:0:0,-10,-10 0/0:35.562:12:12:451:0:0:0,-3.61236,-10 0/0:74.6959:25:25:926:0:0:0,-7.52575,-10 0/0:11.4796:4:4:129:0:0:0,-1.20412,-10 0/0:68.6753:23:23:830:0:0:0,-6.92369,-10 0/0:74.6959:25:25:942:0:0:0,-7.52575,-10 0/0:74.6959:25:25:925:0:0:0,-7.52575,-10 0/0:68.6753:23:23:831:0:0:0,-6.92369,-10 0/0:41.5826:14:14:527:0:0:0,-4.21442,-10 0/0:86.7368:29:29:1066:0:0:0,-8.72987,-10 0/0:98.7739:33:33:1165:0:0:0,-9.93399,-10 0/0:8.46933:3:3:114:0:0:0,-0.90309,-10 0/0:32.5517:11:11:383:0:0:0,-3.31133,-10 0/0:53.6238:18:18:674:0:0:0,-5.41854,-10 0/0:38.5723:13:13:482:0:0:0,-3.91339,-10 0/0:47.6032:16:16:596:0:0:0,-4.81648,-10 0/0:11.4796:4:4:149:0:0:0,-1.20412,-10 0/0:59.6444:20:20:745:0:0:0,-6.0206,-10 0/0:74.6959:25:25:907:0:0:0,-7.52575,-10 0/0:47.6032:16:16:592:0:0:0,-4.81648,-10 0/0:35.562:12:12:433:0:0:0,-3.61236,-10 0/0:77.7062:26:26:972:0:0:0,-7.82678,-10 0/0:56.6341:19:19:686:0:0:0,-5.71957,-10 0/0:68.6753:23:23:845:0:0:0,-6.92369,-10 0/0:65.665:22:22:790:0:0:0,-6.62266,-10 0/0:65.665:22:22:834:0:0:0,-6.62266,-10 0/0:62.6547:21:21:774:0:0:0,-6.32163,-10 0/0:99:42:42:1564:0:0:0,-10,-10 0/0:56.6341:19:19:687:0:0:0,-5.71957,-10 0/0:47.6032:16:16:554:0:0:0,-4.81648,-10 0/0:99:59:59:2135:0:0:0,-10,-10 0/0:44.5929:15:15:559:0:0:0,-4.51545,-10 0/0:80.7165:27:27:1021:0:0:0,-8.12781,-10 0/0:41.5826:14:14:527:0:0:0,-4.21442,-10 0/0:17.5002:6:6:219:0:0:0,-1.80618,-10 0/0:92.7566:31:31:1108:0:0:0,-9.33193,-10 0/0:50.6135:17:17:615:0:0:0,-5.11751,-10 0/0:56.6341:19:19:681:0:0:0,-5.71957,-10 0/0:17.5002:6:6:225:0:0:0,-1.80618,-10 0/0:59.6444:20:20:733:0:0:0,-6.0206,-10 0/0:32.5517:11:11:404:0:0:0,-3.31133,-10 0/0:95.7658:32:32:1196:0:0:0,-9.63296,-10 0/0:56.6341:19:19:717:0:0:0,-5.71957,-10 0/0:95.7658:32:32:1197:0:0:0,-9.63296,-10 0/0:56.6341:19:19:718:0:0:0,-5.71957,-10 0/0:38.5723:13:13:490:0:0:0,-3.91339,-10 0/0:99:41:41:1515:0:0:0,-10,-10 0/0:68.6753:23:23:838:0:0:0,-6.92369,-10 0/0:32.5517:11:11:414:0:0:0,-3.31133,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:41.5826:14:14:532:0:0:0,-4.21442,-10 0/0:44.5929:15:15:555:0:0:0,-4.51545,-10 0/0:99:39:39:1472:0:0:0,-10,-10 0/0:80.7165:27:27:1019:0:0:0,-8.12781,-10 0/0:38.5723:13:13:480:0:0:0,-3.91339,-10 0/0:56.6341:19:19:719:0:0:0,-5.71957,-10 0/0:32.5517:11:11:417:0:0:0,-3.31133,-10 0/0:50.6135:17:17:626:0:0:0,-5.11751,-10 0/0:29.5414:10:10:353:0:0:0,-3.0103,-10 0/0:23.5208:8:8:303:0:0:0,-2.40824,-10 0/0:44.5929:15:15:526:0:0:0,-4.51545,-10 0/0:95.7658:32:32:1165:0:0:0,-9.63296,-10 0/0:86.7368:29:29:1098:0:0:0,-8.72987,-10 0/0:86.7368:29:29:1066:0:0:0,-8.72987,-10 0/0:77.7062:26:26:934:0:0:0,-7.82678,-10 0/0:53.6238:18:18:650:0:0:0,-5.41854,-10 0/0:14.4899:5:5:180:0:0:0,-1.50515,-10 0/0:83.7267:28:28:1043:0:0:0,-8.42884,-10 0/0:41.5826:14:14:516:0:0:0,-4.21442,-10 0/0:29.5414:10:10:380:0:0:0,-3.0103,-10 0/0:50.6135:17:17:623:0:0:0,-5.11751,-10 0/0:74.6959:25:25:937:0:0:0,-7.52575,-10 0/0:71.6856:24:24:852:0:0:0,-7.22472,-10 scaffold_121 2147139 . C T 158.631 . AB=0.421053;ABP=4.03889;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1437;DPB=1437;DPRA=0.796742;EPP=5.18177;EPPR=3.0164;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.934;NS=92;NUMALT=1;ODDS=7.56868;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=296;QR=51622;RO=1424;RPP=22.5536;RPPR=3077.84;RUN=1;SAF=6;SAP=5.18177;SAR=3;SRF=711;SRP=3.0164;SRR=713;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.6003:13:13:466:0:0:0,-3.91339,-10 0/0:53.5283:6:6:222:0:0:0,-1.80618,-10 0/0:74.6003:13:13:489:0:0:0,-3.91339,-10 0/0:65.5695:10:10:334:0:0:0,-3.0103,-10 0/0:68.5798:11:11:415:0:0:0,-3.31133,-10 0/0:59.5489:9:8:289:0:0:0,-2.40824,-10 0/0:99:38:38:1340:0:0:0,-10,-10 0/0:99:22:22:754:0:0:0,-6.62266,-10 0/0:65.5695:10:10:358:0:0:0,-3.0103,-10 0/0:41.4871:2:2:75:0:0:0,-0.60206,-7.125 0/0:59.5489:8:8:278:0:0:0,-2.40824,-10 0/0:71.5901:12:12:415:0:0:0,-3.61236,-10 0/0:99:25:23:825:0:0:0,-6.92369,-10 0/0:98.6804:21:21:781:0:0:0,-6.32163,-10 0/0:86.6414:17:17:598:0:0:0,-5.11751,-10 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:92.6616:19:19:707:0:0:0,-5.71957,-10 0/0:77.6107:14:14:521:0:0:0,-4.21442,-10 0/0:99:24:24:867:0:0:0,-7.22472,-10 0/0:99:22:22:783:0:0:0,-6.62266,-10 0/0:83.6313:16:16:588:0:0:0,-4.81648,-10 0/0:92.6616:19:19:715:0:0:0,-5.71957,-10 0/0:53.5283:6:6:206:0:0:0,-1.80618,-10 0/0:92.6616:19:19:707:0:0:0,-5.71957,-10 0/0:71.5901:12:12:429:0:0:0,-3.61236,-10 0/0:98.6804:21:21:754:0:0:0,-6.32163,-10 0/0:86.6414:17:17:609:0:0:0,-5.11751,-10 0/0:80.621:15:15:556:0:0:0,-4.51545,-10 0/0:83.6313:16:16:564:0:0:0,-4.81648,-10 0/0:99:26:26:936:0:0:0,-7.82678,-10 0/0:47.5077:4:4:147:0:0:0,-1.20412,-10 0/0:56.5386:7:7:264:0:0:0,-2.10721,-10 0/0:86.6414:17:17:621:0:0:0,-5.11751,-10 0/0:50.518:5:5:190:0:0:0,-1.50515,-10 0/0:99:22:22:820:0:0:0,-6.62266,-10 0/0:62.5592:9:9:317:0:0:0,-2.70927,-10 0/0:74.6003:13:13:455:0:0:0,-3.91339,-10 0/0:98.6804:21:21:769:0:0:0,-6.32163,-10 0/0:74.6003:13:13:461:0:0:0,-3.91339,-10 0/0:68.5798:11:11:413:0:0:0,-3.31133,-10 0/0:92.6616:19:19:717:0:0:0,-5.71957,-10 0/0:95.6713:20:20:737:0:0:0,-6.0206,-10 0/0:86.6414:17:17:636:0:0:0,-5.11751,-10 0/0:98.6804:21:21:771:0:0:0,-6.32163,-10 0/0:86.6414:17:17:625:0:0:0,-5.11751,-10 0/0:59.5489:8:8:300:0:0:0,-2.40824,-10 0/0:99:30:30:1103:0:0:0,-9.0309,-10 0/0:71.5901:12:12:445:0:0:0,-3.61236,-10 0/0:71.5901:12:12:434:0:0:0,-3.61236,-10 0/0:99:22:22:803:0:0:0,-6.62266,-10 0/0:0.00224146:6:5:185:1:16:-0.571971,0,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:62.5592:9:9:333:0:0:0,-2.70927,-10 0/0:53.5283:6:6:216:0:0:0,-1.80618,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:71.5901:12:12:449:0:0:0,-3.61236,-10 0/0:74.6003:13:13:471:0:0:0,-3.91339,-10 0/0:50.518:5:5:182:0:0:0,-1.50515,-10 0/0:95.6713:20:20:705:0:0:0,-6.0206,-10 0/0:68.5798:11:11:381:0:0:0,-3.31133,-10 0/0:99:23:23:814:0:0:0,-6.92369,-10 0/0:83.6313:16:16:583:0:0:0,-4.81648,-10 0/0:99:38:37:1302:0:0:0,-10,-10 0/0:89.6516:18:18:679:0:0:0,-5.41854,-10 0/0:59.5489:8:8:287:0:0:0,-2.40824,-10 0/0:99:27:27:929:0:0:0,-8.12781,-10 0/0:71.5901:12:12:440:0:0:0,-3.61236,-10 0/0:47.5077:4:4:141:0:0:0,-1.20412,-10 0/0:99:26:26:941:0:0:0,-7.82678,-10 0/0:68.5798:11:11:391:0:0:0,-3.31133,-10 0/0:80.621:15:15:563:0:0:0,-4.51545,-10 0/0:99:31:31:1117:0:0:0,-9.33193,-10 0/1:99:19:11:418:8:280:-10,0,-10 0/0:68.5798:11:11:401:0:0:0,-3.31133,-10 0/0:98.6804:21:21:704:0:0:0,-6.32163,-10 0/0:71.5901:12:12:428:0:0:0,-3.61236,-10 0/0:74.6003:13:13:443:0:0:0,-3.91339,-10 0/0:83.6313:16:16:601:0:0:0,-4.81648,-10 0/0:47.5077:4:4:151:0:0:0,-1.20412,-10 0/0:80.621:15:15:555:0:0:0,-4.51545,-10 0/0:99:23:23:786:0:0:0,-6.92369,-10 0/0:95.6713:20:20:755:0:0:0,-6.0206,-10 0/0:92.6616:19:19:662:0:0:0,-5.71957,-10 0/0:92.6616:19:19:716:0:0:0,-5.71957,-10 0/0:71.5901:12:12:447:0:0:0,-3.61236,-10 0/0:41.4871:2:2:76:0:0:0,-0.60206,-7.22 0/0:68.5798:11:11:416:0:0:0,-3.31133,-10 0/0:83.6313:16:16:582:0:0:0,-4.81648,-10 0/0:53.5283:6:6:224:0:0:0,-1.80618,-10 0/0:98.6804:21:21:789:0:0:0,-6.32163,-10 0/0:74.6003:13:13:461:0:0:0,-3.91339,-10 0/0:56.5386:7:7:233:0:0:0,-2.10721,-10 scaffold_121 2168008 . A G 847.508 . AB=0.485714;ABP=3.07234;AC=4;AF=0.0217391;AN=184;AO=38;CIGAR=1X;DP=1431;DPB=1431;DPRA=1.23395;EPP=6.66752;EPPR=13.0084;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9388;NS=92;NUMALT=1;ODDS=1.7821;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1327;QR=49985;RO=1390;RPP=85.5263;RPPR=3021.36;RUN=1;SAF=23;SAP=6.66752;SAR=15;SRF=735;SRP=13.0084;SRR=655;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.7087:11:11:403:0:0:0,-3.31133,-10 0/0:32.6572:6:6:204:0:0:0,-1.80618,-10 0/0:65.7705:17:17:619:0:0:0,-5.11751,-10 0/0:47.7087:11:11:396:0:0:0,-3.31133,-10 0/0:53.7293:13:13:494:0:0:0,-3.91339,-10 0/0:29.6469:5:5:185:0:0:0,-1.50515,-10 0/0:92.8622:26:26:965:0:0:0,-7.82678,-10 0/0:50.719:12:12:424:0:0:0,-3.61236,-10 0/0:56.7396:14:14:512:0:0:0,-4.21442,-10 0/0:23.6263:3:3:114:0:0:0,-0.90309,-10 0/0:41.6881:9:9:336:0:0:0,-2.70927,-10 0/0:35.6675:7:7:257:0:0:0,-2.10721,-10 0/0:92.8622:26:26:858:0:0:0,-7.82678,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:62.7602:16:16:553:0:0:0,-4.81648,-10 0/0:95.8716:27:27:1006:0:0:0,-8.12781,-10 0/0:71.7911:19:19:674:0:0:0,-5.71957,-10 0/0:41.6881:9:9:342:0:0:0,-2.70927,-10 0/0:53.7293:13:13:429:0:0:0,-3.91339,-10 0/0:89.8524:25:25:878:0:0:0,-7.52575,-10 0/0:62.7602:16:16:573:0:0:0,-4.81648,-10 0/0:83.8322:23:23:864:0:0:0,-6.92369,-10 0/0:32.6572:6:6:226:0:0:0,-1.80618,-10 0/0:56.7396:14:14:523:0:0:0,-4.21442,-10 0/0:71.7911:19:19:673:0:0:0,-5.71957,-10 0/0:80.8219:22:22:798:0:0:0,-6.62266,-10 0/0:41.6881:9:9:328:0:0:0,-2.70927,-10 0/0:53.7293:13:13:483:0:0:0,-3.91339,-10 0/0:71.7911:19:19:702:0:0:0,-5.71957,-10 0/0:99:34:34:1133:0:0:0,-10,-10 0/0:35.6675:7:7:240:0:0:0,-2.10721,-10 0/0:32.6572:6:6:218:0:0:0,-1.80618,-10 0/0:50.719:12:12:371:0:0:0,-3.61236,-10 0/0:41.6881:9:9:327:0:0:0,-2.70927,-10 0/0:56.7396:14:14:476:0:0:0,-4.21442,-10 0/0:56.7396:14:14:528:0:0:0,-4.21442,-10 0/0:53.7293:13:13:485:0:0:0,-3.91339,-10 0/0:83.8322:23:23:806:0:0:0,-6.92369,-10 0/0:65.7705:17:17:598:0:0:0,-5.11751,-10 0/0:47.7087:11:11:418:0:0:0,-3.31133,-10 0/0:77.8117:21:21:738:0:0:0,-6.32163,-10 0/0:59.7499:15:15:512:0:0:0,-4.51545,-10 0/0:68.7808:18:18:637:0:0:0,-5.41854,-10 0/0:89.8524:25:25:926:0:0:0,-7.52575,-10 0/0:62.7602:16:16:577:0:0:0,-4.81648,-10 0/0:35.6675:7:7:266:0:0:0,-2.10721,-10 0/0:99:41:41:1480:0:0:0,-10,-10 0/0:53.7293:14:13:485:0:0:0,-3.91339,-10 0/0:35.6675:7:7:255:0:0:0,-2.10721,-10 0/0:86.8423:25:24:873:0:0:0,-7.22472,-10 0/0:38.6778:8:8:269:0:0:0,-2.40824,-10 0/0:99:33:33:1182:0:0:0,-9.93399,-10 0/0:92.8622:26:26:943:0:0:0,-7.82678,-10 0/0:23.6263:3:3:114:0:0:0,-0.90309,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:35.6675:7:7:266:0:0:0,-2.10721,-10 0/0:53.1683:21:20:701:1:16:0,-3.39941,-10 0/0:23.6263:3:3:92:0:0:0,-0.90309,-8.58667 0/0:59.7499:15:15:540:0:0:0,-4.51545,-10 0/0:44.6984:10:10:375:0:0:0,-3.0103,-10 0/0:80.8219:22:22:751:0:0:0,-6.62266,-10 0/0:59.7499:15:15:541:0:0:0,-4.51545,-10 0/0:99:49:49:1789:0:0:0,-10,-10 0/0:53.7293:13:13:454:0:0:0,-3.91339,-10 0/0:41.6881:9:9:321:0:0:0,-2.70927,-10 0/0:65.7705:17:17:592:0:0:0,-5.11751,-10 0/0:56.7396:14:14:527:0:0:0,-4.21442,-10 0/0:35.6675:7:7:264:0:0:0,-2.10721,-10 0/0:92.8622:27:26:927:0:0:0,-7.82678,-10 0/0:41.6881:9:9:338:0:0:0,-2.70927,-10 1/1:8.5423:20:0:0:20:722:-10,-6.0206,0 0/0:80.8219:22:22:780:0:0:0,-6.62266,-10 0/0:74.8014:20:20:727:0:0:0,-6.0206,-10 0/1:0.00036952:8:0:0:8:300:-10,-2.40824,0 0/1:99:27:18:632:9:289:-10,0,-10 0/0:41.6881:9:9:337:0:0:0,-2.70927,-10 0/0:59.7499:15:15:524:0:0:0,-4.51545,-10 0/0:41.6881:9:9:340:0:0:0,-2.70927,-10 0/0:23.6263:3:3:114:0:0:0,-0.90309,-10 0/0:38.6778:8:8:282:0:0:0,-2.40824,-10 0/0:92.8622:26:26:899:0:0:0,-7.82678,-10 0/0:74.8014:20:20:696:0:0:0,-6.0206,-10 0/0:62.7602:16:16:575:0:0:0,-4.81648,-10 0/0:62.7602:16:16:573:0:0:0,-4.81648,-10 0/0:71.7911:19:19:697:0:0:0,-5.71957,-10 0/0:23.6263:3:3:114:0:0:0,-0.90309,-10 0/0:68.7808:18:18:680:0:0:0,-5.41854,-10 0/0:32.6572:6:6:215:0:0:0,-1.80618,-10 0/0:29.6469:5:5:188:0:0:0,-1.50515,-10 0/0:44.6984:10:10:353:0:0:0,-3.0103,-10 0/0:38.6778:8:8:301:0:0:0,-2.40824,-10 0/0:59.7499:15:15:542:0:0:0,-4.51545,-10 scaffold_121 2168027 . T C 34304.6 . AB=0.534247;ABP=5.98492;AC=151;AF=0.820652;AN=184;AO=1178;CIGAR=1X;DP=1450;DPB=1450;DPRA=1.20937;EPP=5.95967;EPPR=4.81318;GTI=3;LEN=1;MEANALT=1.01235;MQM=59.9856;MQMR=59.8413;NS=92;NUMALT=1;ODDS=0.253283;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=42511;QR=9870;RO=271;RPP=2517.76;RPPR=557.249;RUN=1;SAF=614;SAP=7.61869;SAR=564;SRF=147;SRP=7.24908;SRR=124;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:45.4791:12:0:0:12:442:-10,-3.61236,0 1/1:30.4276:7:0:0:7:241:-10,-2.10721,0 1/1:60.5306:17:0:0:17:643:-10,-5.11751,0 1/1:42.4688:11:0:0:11:418:-10,-3.31133,0 1/1:48.4894:13:0:0:13:493:-10,-3.91339,0 1/1:24.407:5:0:0:5:175:-10,-1.50515,0 1/1:87.6233:26:0:0:26:963:-10,-7.82678,0 1/1:45.4791:12:0:0:12:441:-10,-3.61236,0 1/1:51.4997:14:0:0:14:517:-10,-4.21442,0 1/1:18.3864:3:0:0:3:114:-10,-0.90309,0 1/1:36.4482:9:0:0:9:338:-10,-2.70927,0 1/1:30.4276:7:0:0:7:257:-10,-2.10721,0 1/1:87.6233:26:0:0:26:935:-10,-7.82678,0 1/1:76.3057:31:1:15:30:1134:-10,-6.34057,0 1/1:57.5203:16:0:0:16:581:-10,-4.81648,0 1/1:90.6337:27:0:0:27:1012:-10,-8.12781,0 1/1:69.5615:20:0:0:20:718:-10,-6.0206,0 1/1:36.4482:9:0:0:9:338:-10,-2.70927,0 1/1:48.4894:13:0:0:13:473:-10,-3.91339,0 0/1:99:27:13:479:14:516:-10,0,-10 0/1:99:16:8:281:8:292:-10,0,-10 0/1:99:23:10:367:13:491:-10,0,-10 0/1:0.369666:6:6:224:0:0:0,-1.80618,-10 0/1:99:14:6:217:8:302:-10,0,-10 1/1:66.5512:19:0:0:19:701:-10,-5.71957,0 0/1:99:24:11:418:13:457:-10,0,-10 1/1:36.4482:9:0:0:9:307:-10,-2.70927,0 1/1:48.4894:13:0:0:13:441:-10,-3.91339,0 0/0:46.3331:20:20:713:0:0:0,-6.0206,-10 1/1:99:34:0:0:34:1200:-10,-10,0 1/1:30.4276:7:0:0:7:235:-10,-2.10721,0 1/1:27.4173:6:0:0:6:228:-10,-1.80618,0 0/0:22.2507:12:12:428:0:0:0,-3.61236,-10 0/0:13.2198:9:9:337:0:0:0,-2.70927,-10 1/1:51.4997:14:0:0:14:477:-10,-4.21442,0 1/1:51.4997:14:0:0:14:511:-10,-4.21442,0 0/0:25.261:13:13:475:0:0:0,-3.91339,-10 1/1:78.5924:23:0:0:23:812:-10,-6.92369,0 1/1:63.5409:18:0:0:18:633:-10,-5.41854,0 0/1:99:11:7:241:4:150:-10,0,-10 0/1:99:21:7:266:14:498:-10,0,-10 1/1:54.51:15:0:0:15:521:-10,-4.51545,0 1/1:63.5409:18:0:0:18:587:-10,-5.41854,0 0/1:99:26:8:298:18:681:-10,0,-10 0/1:99:16:10:355:6:227:-10,0,-10 0/1:96.2115:7:3:114:4:152:-10,0,-10 0/1:99:43:21:755:22:768:-10,0,-10 0/0:28.2713:14:14:514:0:0:0,-4.21442,-10 0/0:7.19917:7:7:265:0:0:0,-2.10721,-10 1/1:84.613:25:0:0:25:908:-10,-7.52575,0 1/1:0.286327:8:1:16:7:263:-10,0,-0.09485 0/1:99:33:15:564:18:648:-10,0,-10 1/1:87.6233:26:0:0:26:905:-10,-7.82678,0 1/1:18.3864:3:0:0:3:86:-8.02667,-0.90309,0 0/1:99:31:17:644:14:520:-10,0,-10 0/0:7.19917:7:7:266:0:0:0,-2.10721,-10 0/0:49.3434:21:21:729:0:0:0,-6.32163,-10 1/1:18.3864:3:0:0:3:113:-10,-0.90309,0 1/1:54.51:15:0:0:15:563:-10,-4.51545,0 1/1:39.4585:10:0:0:10:380:-10,-3.0103,0 1/1:75.5821:22:0:0:22:772:-10,-6.62266,0 1/1:54.51:15:0:0:15:562:-10,-4.51545,0 1/1:99:49:0:0:49:1763:-10,-10,0 1/1:48.4894:13:0:0:13:468:-10,-3.91339,0 1/1:36.4482:9:0:0:9:338:-10,-2.70927,0 1/1:60.5306:17:0:0:17:569:-10,-5.11751,0 1/1:51.4997:14:0:0:14:517:-10,-4.21442,0 1/1:33.4379:8:0:0:8:303:-10,-2.40824,0 1/1:93.6417:28:0:0:28:967:-10,-8.42884,0 1/1:36.4482:9:0:0:9:338:-10,-2.70927,0 1/1:69.5615:20:0:0:20:681:-10,-6.0206,0 1/1:75.5821:22:0:0:22:805:-10,-6.62266,0 1/1:69.5615:21:0:0:20:751:-10,-6.0206,0 1/1:33.4379:8:0:0:8:302:-10,-2.40824,0 1/1:90.6337:27:0:0:27:929:-10,-8.12781,0 1/1:36.4482:9:0:0:9:326:-10,-2.70927,0 1/1:57.5203:16:0:0:16:588:-10,-4.81648,0 1/1:36.4482:9:0:0:9:342:-10,-2.70927,0 1/1:18.3864:3:0:0:3:114:-10,-0.90309,0 1/1:33.4379:8:0:0:8:289:-10,-2.40824,0 1/1:90.6337:27:0:0:27:971:-10,-8.12781,0 1/1:69.5615:20:0:0:20:688:-10,-6.0206,0 1/1:60.5306:17:0:0:17:607:-10,-5.11751,0 1/1:57.5203:16:0:0:16:535:-10,-4.81648,0 1/1:66.5512:19:0:0:19:706:-10,-5.71957,0 1/1:18.3864:3:0:0:3:112:-10,-0.90309,0 0/0:40.3125:18:18:683:0:0:0,-5.41854,-10 0/1:0.369666:6:6:206:0:0:0,-1.80618,-10 1/1:24.407:5:0:0:5:188:-10,-1.50515,0 1/1:39.4585:10:0:0:10:331:-10,-3.0103,0 1/1:33.4379:8:0:0:8:304:-10,-2.40824,0 1/1:54.51:15:0:0:15:539:-10,-4.51545,0 scaffold_121 2363398 . T C 1659.82 . AB=0.590361;ABP=8.89682;AC=7;AF=0.0380435;AN=184;AO=66;CIGAR=1X;DP=1298;DPB=1298;DPRA=1.12434;EPP=21.9613;EPPR=3.0262;GTI=2;LEN=1;MEANALT=1.14286;MQM=60;MQMR=59.9691;NS=92;NUMALT=1;ODDS=0.0857385;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2443;QR=45374;RO=1229;RPP=137.773;RPPR=2560.03;RUN=1;SAF=46;SAP=25.2514;SAR=20;SRF=626;SRP=3.94497;SRR=603;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:43.0776:10:10:375:0:0:0,-3.0103,-10 0/0:37.057:8:8:268:0:0:0,-2.40824,-10 0/0:46.0879:11:11:378:0:0:0,-3.31133,-10 0/0:34.0467:7:7:253:0:0:0,-2.10721,-10 0/0:46.0879:11:11:418:0:0:0,-3.31133,-10 0/0:40.0673:9:9:342:0:0:0,-2.70927,-10 0/0:99:32:31:1164:0:0:0,-9.33193,-10 0/1:99:17:10:361:7:265:-10,0,-10 0/0:34.0467:7:7:266:0:0:0,-2.10721,-10 0/0:15.9849:1:1:38:0:0:0,-0.30103,-3.8 0/0:31.0364:6:6:225:0:0:0,-1.80618,-10 0/0:18.9952:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/1:99:31:15:568:16:581:-10,0,-10 0/0:70.1703:19:19:699:0:0:0,-5.71957,-10 0/0:67.16:18:18:626:0:0:0,-5.41854,-10 0/0:73.1806:20:20:750:0:0:0,-6.0206,-10 0/0:43.0776:10:10:371:0:0:0,-3.0103,-10 0/0:43.0776:10:10:379:0:0:0,-3.0103,-10 0/0:94.2522:27:27:1015:0:0:0,-8.12781,-10 0/0:2.10774:11:9:338:1:38:-1.5247,0,-10 0/0:79.2011:22:22:820:0:0:0,-6.62266,-10 0/0:31.0364:6:6:226:0:0:0,-1.80618,-10 0/0:46.0879:11:11:416:0:0:0,-3.31133,-10 0/0:61.1394:16:16:564:0:0:0,-4.81648,-10 0/0:61.1394:16:16:566:0:0:0,-4.81648,-10 0/0:58.1291:15:15:563:0:0:0,-4.51545,-10 0/0:40.0673:9:9:338:0:0:0,-2.70927,-10 0/0:46.0879:11:11:389:0:0:0,-3.31133,-10 0/0:91.2421:26:26:975:0:0:0,-7.82678,-10 0/0:40.0673:9:9:316:0:0:0,-2.70927,-10 0/0:40.0673:9:9:319:0:0:0,-2.70927,-10 0/0:58.1291:15:15:565:0:0:0,-4.51545,-10 0/0:37.057:8:8:298:0:0:0,-2.40824,-10 0/0:61.1394:16:16:599:0:0:0,-4.81648,-10 0/0:31.0364:6:6:203:0:0:0,-1.80618,-10 0/0:67.16:18:18:610:0:0:0,-5.41854,-10 0/0:76.1909:21:21:757:0:0:0,-6.32163,-10 0/0:52.1085:13:13:494:0:0:0,-3.91339,-10 0/0:37.057:8:8:304:0:0:0,-2.40824,-10 0/0:73.1806:20:20:734:0:0:0,-6.0206,-10 0/0:52.1085:13:13:461:0:0:0,-3.91339,-10 0/0:43.0776:10:10:371:0:0:0,-3.0103,-10 0/1:99:16:4:130:12:419:-10,0,-10 0/0:64.1497:17:17:639:0:0:0,-5.11751,-10 0/0:58.1291:15:15:559:0:0:0,-4.51545,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:67.16:18:18:681:0:0:0,-5.41854,-10 0/0:37.057:8:8:281:0:0:0,-2.40824,-10 0/0:88.232:25:25:946:0:0:0,-7.52575,-10 0/0:43.0776:10:10:368:0:0:0,-3.0103,-10 0/0:82.2114:23:23:843:0:0:0,-6.92369,-10 0/0:40.0673:9:9:342:0:0:0,-2.70927,-10 0/0:31.0364:6:6:228:0:0:0,-1.80618,-10 0/0:85.2217:24:24:876:0:0:0,-7.22472,-10 0/0:49.0982:12:12:418:0:0:0,-3.61236,-10 0/0:49.0982:12:12:449:0:0:0,-3.61236,-10 0/1:0.151307:9:0:0:9:342:-10,-2.70927,0 1/1:10.438:16:0:0:16:608:-10,-4.81648,0 0/0:31.0364:6:6:214:0:0:0,-1.80618,-10 0/0:99:29:29:1098:0:0:0,-8.72987,-10 0/0:73.1806:20:20:760:0:0:0,-6.0206,-10 0/0:70.1703:19:19:675:0:0:0,-5.71957,-10 0/0:43.0776:10:10:356:0:0:0,-3.0103,-10 0/0:49.0982:12:12:454:0:0:0,-3.61236,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/1:99:10:5:189:5:190:-10,0,-10 0/0:37.057:8:8:279:0:0:0,-2.40824,-10 0/0:70.1703:19:19:703:0:0:0,-5.71957,-10 0/0:34.0467:7:7:266:0:0:0,-2.10721,-10 0/0:55.1188:14:14:530:0:0:0,-4.21442,-10 0/0:76.1909:21:21:771:0:0:0,-6.32163,-10 0/0:58.1291:15:15:521:0:0:0,-4.51545,-10 0/0:61.1394:16:16:577:0:0:0,-4.81648,-10 0/0:55.1188:14:14:522:0:0:0,-4.21442,-10 0/0:40.0673:9:9:340:0:0:0,-2.70927,-10 0/0:46.0879:11:11:409:0:0:0,-3.31133,-10 0/0:46.0879:11:11:400:0:0:0,-3.31133,-10 0/0:18.9952:2:2:76:0:0:0,-0.60206,-7.22 0/0:34.0467:7:7:266:0:0:0,-2.10721,-10 0/0:82.2114:23:23:841:0:0:0,-6.92369,-10 0/0:70.1703:19:19:714:0:0:0,-5.71957,-10 0/0:79.2011:22:22:832:0:0:0,-6.62266,-10 0/0:70.1703:19:19:719:0:0:0,-5.71957,-10 0/0:61.1394:16:16:604:0:0:0,-4.81648,-10 0/0:18.9952:3:2:76:0:0:0,-0.60206,-6.98667 0/0:40.0673:9:9:340:0:0:0,-2.70927,-10 0/0:34.0467:7:7:263:0:0:0,-2.10721,-10 0/0:31.0364:6:6:228:0:0:0,-1.80618,-10 0/0:49.0982:12:12:434:0:0:0,-3.61236,-10 0/0:49.0982:12:12:454:0:0:0,-3.61236,-10 0/0:52.1085:13:13:483:0:0:0,-3.91339,-10 scaffold_121 2382744 . G A 29055.9 . AB=0.530612;ABP=5.00451;AC=151;AF=0.820652;AN=184;AO=965;CIGAR=1X;DP=1206;DPB=1206;DPRA=0.927536;EPP=4.65072;EPPR=3.4518;GTI=3;LEN=1;MEANALT=1;MQM=59.9565;MQMR=60;NS=92;NUMALT=1;ODDS=0.52375;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=35800;QR=8939;RO=241;RPP=2004.03;RPPR=500.602;RUN=1;SAF=485;SAP=3.06656;SAR=480;SRF=121;SRP=3.01931;SRR=120;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:10.3228:13:1:38:12:450:-10,0,-1.00055 1/1:37.6115:10:0:0:10:379:-10,-3.0103,0 1/1:46.6424:13:0:0:13:476:-10,-3.91339,0 1/1:34.6012:9:0:0:9:341:-10,-2.70927,0 1/1:43.6321:12:0:0:12:427:-10,-3.61236,0 1/1:19.5497:4:0:0:4:151:-10,-1.20412,0 1/1:76.7454:23:0:0:23:843:-10,-6.92369,0 1/1:40.6218:11:0:0:11:408:-10,-3.31133,0 1/1:34.6012:9:0:0:9:319:-10,-2.70927,0 1/1:25.5703:6:0:0:6:227:-10,-1.80618,0 1/1:25.5703:6:0:0:6:227:-10,-1.80618,0 1/1:13.5291:2:0:0:2:76:-7.22,-0.60206,0 1/1:67.7145:20:0:0:20:755:-10,-6.0206,0 1/1:79.7557:24:0:0:24:893:-10,-7.22472,0 1/1:58.6836:17:0:0:17:644:-10,-5.11751,0 1/1:76.7454:23:0:0:23:849:-10,-6.92369,0 1/1:58.6836:17:0:0:17:618:-10,-5.11751,0 1/1:16.5394:3:0:0:3:114:-10,-0.90309,0 1/1:76.7454:23:0:0:23:865:-10,-6.92369,0 0/1:99:20:9:340:11:405:-10,0,-10 0/1:99:14:9:337:5:189:-10,0,-10 0/1:99:24:11:413:13:463:-10,0,-10 0/1:0.101913:2:2:76:0:0:0,-0.60206,-7.22 0/1:99:9:4:149:5:189:-10,0,-10 1/1:43.6321:12:0:0:12:452:-10,-3.61236,0 0/1:99:13:7:266:6:227:-10,0,-10 1/1:49.6527:14:0:0:14:529:-10,-4.21442,0 1/1:40.6218:11:0:0:11:415:-10,-3.31133,0 0/0:47.6977:19:19:646:0:0:0,-5.71957,-10 1/1:73.7351:22:0:0:22:766:-10,-6.62266,0 1/1:19.5497:4:0:0:4:152:-10,-1.20412,0 1/1:31.5909:8:0:0:8:304:-10,-2.40824,0 0/0:14.5844:8:8:303:0:0:0,-2.40824,-10 0/1:0.422837:4:4:150:0:0:0,-1.20412,-10 1/1:40.6218:11:0:0:11:410:-10,-3.31133,0 1/1:16.5394:3:0:0:3:110:-10,-0.90309,0 0/1:0.891327:5:5:179:0:0:0,-1.50515,-10 1/1:61.6939:18:0:0:18:675:-10,-5.41854,0 1/1:46.6424:13:0:0:13:486:-10,-3.91339,0 0/1:99:11:7:241:4:145:-10,0,-10 0/1:99:19:10:378:9:341:-10,0,-10 1/1:40.6218:11:0:0:11:411:-10,-3.31133,0 1/1:40.6218:11:0:0:11:392:-10,-3.31133,0 0/1:99:21:13:491:8:302:-10,0,-10 0/1:99:14:6:228:8:298:-10,0,-10 0/1:83.9037:12:3:110:9:339:-10,0,-8.99673 0/1:99:27:15:548:12:455:-10,0,-10 0/0:50.708:20:20:756:0:0:0,-6.0206,-10 0/0:26.6256:12:12:456:0:0:0,-3.61236,-10 1/1:61.6939:18:0:0:18:660:-10,-5.41854,0 1/1:28.5806:7:0:0:7:243:-10,-2.10721,0 0/1:99:33:13:494:20:753:-10,0,-10 1/1:37.6115:10:0:0:10:379:-10,-3.0103,0 1/1:22.56:5:0:0:5:181:-10,-1.50515,0 0/1:99:15:7:253:8:278:-10,0,-10 0/0:11.5741:7:7:266:0:0:0,-2.10721,-10 0/0:50.708:20:20:750:0:0:0,-6.0206,-10 1/1:31.5909:8:0:0:8:270:-10,-2.40824,0 1/1:28.5806:7:0:0:7:266:-10,-2.10721,0 1/1:31.5909:8:0:0:8:303:-10,-2.40824,0 1/1:64.7042:19:0:0:19:674:-10,-5.71957,0 1/1:40.6218:11:0:0:11:418:-10,-3.31133,0 1/1:85.7763:26:0:0:26:980:-10,-7.82678,0 1/1:61.6939:18:0:0:18:682:-10,-5.41854,0 1/1:34.6012:9:0:0:9:340:-10,-2.70927,0 1/1:58.6836:17:0:0:17:633:-10,-5.11751,0 1/1:58.6836:17:0:0:17:643:-10,-5.11751,0 1/1:34.6012:9:0:0:9:318:-10,-2.70927,0 1/1:99:31:0:0:31:1151:-10,-9.33193,0 1/1:25.5703:6:0:0:6:227:-10,-1.80618,0 1/1:34.6012:9:0:0:9:337:-10,-2.70927,0 1/1:55.6733:16:0:0:16:587:-10,-4.81648,0 1/1:43.6321:12:0:0:12:454:-10,-3.61236,0 1/1:34.6012:9:0:0:9:327:-10,-2.70927,0 1/1:67.7145:20:0:0:20:722:-10,-6.0206,0 1/1:25.5703:6:0:0:6:226:-10,-1.80618,0 1/1:43.6321:12:0:0:12:449:-10,-3.61236,0 1/1:25.5703:6:0:0:6:228:-10,-1.80618,0 1/1:19.5497:4:0:0:4:150:-10,-1.20412,0 1/1:16.5394:3:0:0:3:113:-10,-0.90309,0 1/1:85.7763:26:0:0:26:980:-10,-7.82678,0 1/1:73.7351:22:0:0:22:823:-10,-6.62266,0 1/1:31.5909:8:0:0:8:279:-10,-2.40824,0 1/1:52.663:15:0:0:15:565:-10,-4.51545,0 1/1:40.6218:11:0:0:11:416:-10,-3.31133,0 1/1:22.56:5:0:0:5:186:-10,-1.50515,0 0/0:41.6771:17:17:627:0:0:0,-5.11751,-10 0/0:26.6256:12:12:444:0:0:0,-3.61236,-10 1/1:22.56:5:0:0:5:163:-10,-1.50515,0 1/1:55.6733:16:0:0:16:606:-10,-4.81648,0 1/1:67.7145:20:0:0:20:752:-10,-6.0206,0 1/1:49.6527:14:0:0:14:521:-10,-4.21442,0 scaffold_121 2500490 . T C 41390.2 . AB=0.532353;ABP=6.10145;AC=150;AF=0.815217;AN=184;AO=1411;CIGAR=1X;DP=1730;DPB=1730;DPRA=1.29465;EPP=5.35106;EPPR=14.5253;GTI=1;LEN=1;MEANALT=1.02469;MQM=59.8979;MQMR=59.9937;NS=92;NUMALT=1;ODDS=0.139626;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=51344;QR=11619;RO=317;RPP=3066.96;RPPR=691.367;RUN=1;SAF=686;SAP=5.35106;SAR=725;SRF=179;SRP=14.5253;SRR=138;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:16.4588:18:1:38:17:614:-10,-0.363267,0 1/1:45.0403:12:0:0:12:450:-10,-3.61236,0 1/1:90.1936:27:0:0:27:982:-10,-8.12781,0 1/1:63.1021:18:0:0:18:674:-10,-5.41854,0 1/1:45.0403:12:0:0:12:423:-10,-3.61236,0 1/1:69.1227:20:0:0:20:708:-10,-6.0206,0 1/1:99:30:0:0:30:1016:-10,-9.0309,0 1/1:84.1742:25:0:0:25:913:-10,-7.52575,0 1/1:45.0403:12:0:0:12:410:-10,-3.61236,0 1/1:14.9373:2:0:0:2:76:-7.22,-0.60206,0 1/1:36.0094:9:0:0:9:340:-10,-2.70927,0 1/1:36.0094:9:0:0:9:326:-10,-2.70927,0 1/1:99:30:0:0:30:1064:-10,-9.0309,0 1/1:99:36:0:0:36:1276:-10,-10,0 1/1:87.1839:26:0:0:26:963:-10,-7.82678,0 1/1:84.1742:25:0:0:25:881:-10,-7.52575,0 1/1:75.1433:22:0:0:22:813:-10,-6.62266,0 1/1:48.0506:13:0:0:13:493:-10,-3.91339,0 1/1:69.1227:20:0:0:20:712:-10,-6.0206,0 0/1:99:30:13:482:17:612:-10,0,-10 0/1:99:16:10:353:6:226:-10,0,-10 0/1:99:31:20:742:11:390:-10,0,-10 0/1:0.413753:7:7:263:0:0:0,-2.10721,-10 0/1:99:20:11:396:9:341:-10,0,-10 1/1:87.1839:26:0:0:26:937:-10,-7.82678,0 0/1:99:31:13:483:18:656:-10,0,-10 1/1:72.133:21:0:0:21:754:-10,-6.32163,0 1/1:72.133:21:0:0:21:731:-10,-6.32163,0 0/0:41.764:20:20:736:0:0:0,-6.0206,-10 1/1:81.1637:24:0:0:24:882:-10,-7.22472,0 1/1:36.0094:9:0:0:9:339:-10,-2.70927,0 1/1:39.0197:10:0:0:10:352:-10,-3.0103,0 0/0:44.7743:21:21:740:0:0:0,-6.32163,-10 0/0:5.64037:8:8:303:0:0:0,-2.40824,-10 1/1:51.0609:14:0:0:14:512:-10,-4.21442,0 1/1:36.0094:9:0:0:9:339:-10,-2.70927,0 0/0:29.7228:16:16:557:0:0:0,-4.81648,-10 1/1:42.03:11:0:0:11:392:-10,-3.31133,0 1/1:57.0815:16:0:0:16:577:-10,-4.81648,0 0/1:86.5908:12:3:114:9:325:-10,0,-9.37006 0/1:99:28:11:413:17:606:-10,0,-10 1/1:69.1227:20:0:0:20:754:-10,-6.0206,0 1/1:93.2048:29:0:0:28:1059:-10,-8.42884,0 0/1:99:23:8:299:15:570:-10,0,-10 0/1:99:13:7:261:6:221:-10,0,-10 0/1:99:13:5:183:8:300:-10,0,-10 0/1:99:38:16:584:22:832:-10,0,-10 0/0:26.7125:15:15:566:0:0:0,-4.51545,-10 0/0:11.661:10:10:380:0:0:0,-3.0103,-10 1/1:99:51:0:0:51:1910:-10,-10,0 1/1:39.0197:10:0:0:10:380:-10,-3.0103,0 0/1:99:37:20:702:17:619:-10,0,-10 1/1:57.0815:16:0:0:16:600:-10,-4.81648,0 1/1:14.9373:2:0:0:2:76:-7.22,-0.60206,0 0/1:99:48:22:812:26:940:-10,0,-10 0/0:29.7228:16:16:573:0:0:0,-4.81648,-10 0/0:38.7537:19:19:708:0:0:0,-5.71957,-10 1/1:45.0403:12:0:0:12:419:-10,-3.61236,0 1/1:69.1227:20:0:0:20:727:-10,-6.0206,0 1/1:29.9888:7:0:0:7:262:-10,-2.10721,0 1/1:99:32:0:0:32:1143:-10,-9.63296,0 1/1:63.1021:18:0:0:18:678:-10,-5.41854,0 1/1:99:33:0:0:33:1193:-10,-9.93399,0 1/1:39.0197:10:0:0:10:352:-10,-3.0103,0 1/1:78.1535:23:0:0:23:847:-10,-6.92369,0 1/1:90.1936:27:0:0:27:949:-10,-8.12781,0 1/1:84.1742:25:0:0:25:939:-10,-7.52575,0 1/1:39.0197:10:0:0:10:375:-10,-3.0103,0 1/1:99:30:0:0:30:1073:-10,-9.0309,0 1/1:23.9682:5:0:0:5:190:-10,-1.50515,0 1/1:78.1535:23:0:0:23:835:-10,-6.92369,0 1/1:99:30:0:0:30:1108:-10,-9.0309,0 1/1:78.1535:23:0:0:23:863:-10,-6.92369,0 1/1:26.9785:6:0:0:6:224:-10,-1.80618,0 1/1:96.2106:29:0:0:29:1043:-10,-8.72987,0 1/1:48.0506:13:0:0:13:478:-10,-3.91339,0 1/1:51.0609:14:0:0:14:507:-10,-4.21442,0 1/1:48.0506:13:0:0:13:494:-10,-3.91339,0 1/1:36.0094:9:0:0:9:342:-10,-2.70927,0 1/1:39.0197:10:0:0:10:367:-10,-3.0103,0 1/1:99:37:0:0:36:1310:-10,-10,0 1/1:75.1433:22:0:0:22:740:-10,-6.62266,0 1/1:54.0712:15:0:0:15:536:-10,-4.51545,0 1/1:54.0712:15:0:0:15:549:-10,-4.51545,0 1/1:45.0403:12:0:0:12:432:-10,-3.61236,0 1/1:17.9476:3:0:0:3:110:-10,-0.90309,0 0/0:8.65067:9:9:340:0:0:0,-2.70927,-10 0/0:29.7228:16:16:591:0:0:0,-4.81648,-10 1/1:36.0094:9:0:0:9:319:-10,-2.70927,0 1/1:54.0712:15:0:0:15:570:-10,-4.51545,0 1/1:51.0609:14:0:0:14:483:-10,-4.21442,0 1/1:51.0609:14:0:0:14:521:-10,-4.21442,0 scaffold_121 2520377 . T A 1423.29 . AB=0.518182;ABP=3.32615;AC=7;AF=0.0380435;AN=184;AO=60;CIGAR=1X;DP=1298;DPB=1298;DPRA=1.12831;EPP=3.15506;EPPR=3.26329;GTI=3;LEN=1;MEANALT=1;MQM=59.8333;MQMR=59.966;NS=92;NUMALT=1;ODDS=1.67225;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2159;QR=45266;RO=1236;RPP=133.299;RPPR=2541.32;RUN=1;SAF=29;SAP=3.15506;SAR=31;SRF=609;SRP=3.57952;SRR=627;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.8059:14:14:532:0:0:0,-4.21442,-10 0/0:30.7132:5:5:188:0:0:0,-1.50515,-10 0/1:99:9:3:114:6:218:-10,0,-9.85501 0/0:36.7338:7:7:257:0:0:0,-2.10721,-10 0/0:48.775:11:11:386:0:0:0,-3.31133,-10 0/0:30.7132:5:5:190:0:0:0,-1.50515,-10 0/0:75.8678:20:20:728:0:0:0,-6.0206,-10 0/1:99:24:14:528:10:380:-10,0,-10 0/0:57.8059:14:14:502:0:0:0,-4.21442,-10 0/0:33.7235:6:6:214:0:0:0,-1.80618,-10 0/0:33.7235:6:6:223:0:0:0,-1.80618,-10 0/0:33.7235:6:6:227:0:0:0,-1.80618,-10 0/0:90.9189:25:25:922:0:0:0,-7.52575,-10 0/1:99:26:14:492:12:450:-10,0,-10 0/0:63.8265:16:16:603:0:0:0,-4.81648,-10 0/0:87.9088:24:24:885:0:0:0,-7.22472,-10 0/0:45.7647:10:10:379:0:0:0,-3.0103,-10 0/0:45.7647:10:10:379:0:0:0,-3.0103,-10 0/0:69.8471:18:18:654:0:0:0,-5.41854,-10 0/0:99:30:29:1096:0:0:0,-8.72987,-10 0/0:57.8059:14:14:507:0:0:0,-4.21442,-10 0/0:93.9288:26:26:980:0:0:0,-7.82678,-10 0/0:24.6926:3:3:92:0:0:0,-0.90309,-8.58667 0/0:48.775:11:11:389:0:0:0,-3.31133,-10 0/0:63.8265:16:16:586:0:0:0,-4.81648,-10 0/0:72.8574:19:19:673:0:0:0,-5.71957,-10 0/0:57.8059:14:14:521:0:0:0,-4.21442,-10 0/0:39.7441:8:8:289:0:0:0,-2.40824,-10 0/0:66.8368:17:17:627:0:0:0,-5.11751,-10 0/0:87.9088:24:24:879:0:0:0,-7.22472,-10 0/0:30.7132:5:5:184:0:0:0,-1.50515,-10 0/0:24.6926:3:3:112:0:0:0,-0.90309,-10 0/0:45.7647:10:10:370:0:0:0,-3.0103,-10 0/0:39.7441:8:8:271:0:0:0,-2.40824,-10 0/0:45.7647:10:10:357:0:0:0,-3.0103,-10 0/0:39.7441:8:8:281:0:0:0,-2.40824,-10 0/0:60.8162:15:15:560:0:0:0,-4.51545,-10 0/0:75.8678:20:20:737:0:0:0,-6.0206,-10 0/0:51.7853:12:12:456:0:0:0,-3.61236,-10 0/0:48.775:11:11:414:0:0:0,-3.31133,-10 0/0:69.8471:18:18:652:0:0:0,-5.41854,-10 0/0:63.8265:16:16:550:0:0:0,-4.81648,-10 0/0:45.7647:10:10:344:0:0:0,-3.0103,-10 0/1:99:21:12:447:9:340:-10,0,-10 0/0:48.775:12:11:414:0:0:0,-3.31133,-10 0/0:54.7956:13:13:464:0:0:0,-3.91339,-10 0/0:99:28:28:1033:0:0:0,-8.42884,-10 0/0:54.7956:13:13:486:0:0:0,-3.91339,-10 0/0:48.775:11:11:416:0:0:0,-3.31133,-10 0/0:78.8781:21:21:796:0:0:0,-6.32163,-10 0/0:33.7235:6:6:226:0:0:0,-1.80618,-10 0/0:93.9288:26:26:980:0:0:0,-7.82678,-10 0/0:48.775:11:11:411:0:0:0,-3.31133,-10 0/0:45.7647:10:10:377:0:0:0,-3.0103,-10 0/0:96.9383:27:27:985:0:0:0,-8.12781,-10 0/0:45.7647:10:10:378:0:0:0,-3.0103,-10 0/0:63.8265:16:16:566:0:0:0,-4.81648,-10 0/1:0.00359824:7:0:0:7:233:-10,-2.10721,0 0/1:0.0144109:9:0:0:9:323:-10,-2.70927,0 0/0:54.7956:13:13:487:0:0:0,-3.91339,-10 0/0:90.9189:25:25:879:0:0:0,-7.52575,-10 0/0:23.2017:10:9:338:1:16:0,-0.4103,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:87.9088:24:24:901:0:0:0,-7.22472,-10 0/0:30.7132:5:5:188:0:0:0,-1.50515,-10 0/0:47.7687:27:26:944:1:38:0,-2.89645,-10 0/1:82.4648:14:10:376:4:130:-10,0,-10 0/0:36.7338:7:7:254:0:0:0,-2.10721,-10 0/0:96.9383:27:27:968:0:0:0,-8.12781,-10 0/0:0.712438:10:9:305:1:31:-1.0897,0,-10 0/0:51.7853:12:12:423:0:0:0,-3.61236,-10 0/0:75.8678:20:20:752:0:0:0,-6.0206,-10 0/0:78.8781:21:21:776:0:0:0,-6.32163,-10 0/0:42.7544:9:9:336:0:0:0,-2.70927,-10 0/0:78.8781:21:21:772:0:0:0,-6.32163,-10 0/0:45.7647:10:10:305:0:0:0,-3.0103,-10 0/0:42.7544:9:9:333:0:0:0,-2.70927,-10 0/0:51.7853:12:12:446:0:0:0,-3.61236,-10 0/0:18.672:1:1:16:0:0:0,-0.30103,-1.6 0/0:48.775:11:11:413:0:0:0,-3.31133,-10 0/0:63.8265:16:16:605:0:0:0,-4.81648,-10 0/0:57.8059:14:14:504:0:0:0,-4.21442,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:42.7544:9:9:327:0:0:0,-2.70927,-10 0/0:66.8368:17:17:586:0:0:0,-5.11751,-10 0/0:21.6823:2:2:76:0:0:0,-0.60206,-7.22 0/0:69.8471:18:18:670:0:0:0,-5.41854,-10 0/0:33.7235:6:6:216:0:0:0,-1.80618,-10 0/0:36.7338:7:7:265:0:0:0,-2.10721,-10 0/0:63.8265:16:16:600:0:0:0,-4.81648,-10 0/0:54.7956:13:13:438:0:0:0,-3.91339,-10 0/0:39.7441:8:8:291:0:0:0,-2.40824,-10 scaffold_121 2520381 . T C 222.246 . AB=0.47619;ABP=3.1137;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=1298;DPB=1298;DPRA=1.49648;EPP=10.8276;EPPR=3.07109;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9673;NS=92;NUMALT=1;ODDS=6.71638;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=375;QR=47581;RO=1286;RPP=24.725;RPPR=2726.47;RUN=1;SAF=8;SAP=10.8276;SAR=2;SRF=632;SRP=3.82756;SRR=654;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:68.3162:14:14:529:0:0:0,-4.21442,-10 0/0:41.2235:5:5:186:0:0:0,-1.50515,-10 0/0:53.2647:9:9:339:0:0:0,-2.70927,-10 0/0:47.2441:7:7:265:0:0:0,-2.10721,-10 0/0:59.2853:11:11:418:0:0:0,-3.31133,-10 0/0:41.2235:5:5:188:0:0:0,-1.50515,-10 0/0:86.3777:20:20:757:0:0:0,-6.0206,-10 0/0:98.4181:24:24:909:0:0:0,-7.22472,-10 0/0:65.3059:14:13:472:0:0:0,-3.91339,-10 0/0:44.2338:6:6:225:0:0:0,-1.80618,-10 0/0:44.2338:6:6:206:0:0:0,-1.80618,-10 0/0:44.2338:6:6:228:0:0:0,-1.80618,-10 0/0:99:25:25:949:0:0:0,-7.52575,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:74.3368:16:16:608:0:0:0,-4.81648,-10 0/0:98.4181:24:24:864:0:0:0,-7.22472,-10 0/0:56.275:10:10:380:0:0:0,-3.0103,-10 0/0:56.275:10:10:379:0:0:0,-3.0103,-10 0/0:80.3574:18:18:683:0:0:0,-5.41854,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:68.3162:14:14:515:0:0:0,-4.21442,-10 0/0:99:26:26:971:0:0:0,-7.82678,-10 0/0:35.2029:3:3:89:0:0:0,-0.90309,-8.30667 0/0:59.2853:11:11:409:0:0:0,-3.31133,-10 0/0:74.3368:16:16:581:0:0:0,-4.81648,-10 0/0:83.3676:19:19:685:0:0:0,-5.71957,-10 0/0:68.3162:14:14:531:0:0:0,-4.21442,-10 0/0:50.2544:8:8:300:0:0:0,-2.40824,-10 0/0:77.3471:17:17:623:0:0:0,-5.11751,-10 0/0:98.4181:24:24:888:0:0:0,-7.22472,-10 0/0:41.2235:5:5:188:0:0:0,-1.50515,-10 0/0:35.2029:3:3:111:0:0:0,-0.90309,-10 0/0:56.275:10:10:379:0:0:0,-3.0103,-10 0/0:50.2544:8:8:260:0:0:0,-2.40824,-10 0/0:56.275:10:10:345:0:0:0,-3.0103,-10 0/0:50.2544:8:8:304:0:0:0,-2.40824,-10 0/0:71.3265:15:15:563:0:0:0,-4.51545,-10 0/0:86.3777:20:20:747:0:0:0,-6.0206,-10 0/0:62.2956:12:12:456:0:0:0,-3.61236,-10 0/0:59.2853:11:11:417:0:0:0,-3.31133,-10 0/0:80.3574:18:18:680:0:0:0,-5.41854,-10 0/0:74.3368:16:16:584:0:0:0,-4.81648,-10 0/0:56.275:10:10:356:0:0:0,-3.0103,-10 0/0:89.3881:21:21:795:0:0:0,-6.32163,-10 0/0:62.2956:12:12:451:0:0:0,-3.61236,-10 0/0:65.3059:13:13:461:0:0:0,-3.91339,-10 0/0:99:28:28:1060:0:0:0,-8.42884,-10 0/0:65.3059:13:13:494:0:0:0,-3.91339,-10 0/0:59.2853:11:11:393:0:0:0,-3.31133,-10 0/0:89.3881:21:21:797:0:0:0,-6.32163,-10 0/0:44.2338:6:6:228:0:0:0,-1.80618,-10 0/0:99:26:26:988:0:0:0,-7.82678,-10 0/0:59.2853:11:11:388:0:0:0,-3.31133,-10 0/0:56.275:10:10:358:0:0:0,-3.0103,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:56.275:10:10:379:0:0:0,-3.0103,-10 0/0:74.3368:16:16:558:0:0:0,-4.81648,-10 0/0:47.2441:7:7:261:0:0:0,-2.10721,-10 0/0:53.2647:9:9:320:0:0:0,-2.70927,-10 0/0:65.3059:13:13:494:0:0:0,-3.91339,-10 0/0:99:25:25:923:0:0:0,-7.52575,-10 0/0:53.2647:10:9:334:0:0:0,-2.70927,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:98.4181:24:24:903:0:0:0,-7.22472,-10 0/0:41.2235:5:5:189:0:0:0,-1.50515,-10 0/0:99:27:27:972:0:0:0,-8.12781,-10 0/0:68.3162:14:14:531:0:0:0,-4.21442,-10 0/0:47.2441:7:7:244:0:0:0,-2.10721,-10 0/0:99:27:27:983:0:0:0,-8.12781,-10 0/0:56.275:10:10:380:0:0:0,-3.0103,-10 0/0:62.2956:12:12:441:0:0:0,-3.61236,-10 0/0:86.3777:20:20:728:0:0:0,-6.0206,-10 0/1:99:21:11:418:10:375:-10,0,-10 0/0:53.2647:9:9:341:0:0:0,-2.70927,-10 0/0:89.3881:21:21:751:0:0:0,-6.32163,-10 0/0:56.275:10:10:355:0:0:0,-3.0103,-10 0/0:53.2647:9:9:319:0:0:0,-2.70927,-10 0/0:62.2956:12:12:447:0:0:0,-3.61236,-10 0/0:29.1823:1:1:35:0:0:0,-0.30103,-3.5 0/0:59.2853:11:11:372:0:0:0,-3.31133,-10 0/0:74.3368:16:16:608:0:0:0,-4.81648,-10 0/0:68.3162:14:14:515:0:0:0,-4.21442,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:53.2647:9:9:341:0:0:0,-2.70927,-10 0/0:77.3471:17:17:636:0:0:0,-5.11751,-10 0/0:32.1926:2:2:76:0:0:0,-0.60206,-7.22 0/0:80.3574:18:18:663:0:0:0,-5.41854,-10 0/0:44.2338:6:6:224:0:0:0,-1.80618,-10 0/0:47.2441:7:7:255:0:0:0,-2.10721,-10 0/0:74.3368:16:16:606:0:0:0,-4.81648,-10 0/0:65.3059:13:13:485:0:0:0,-3.91339,-10 0/0:50.2544:8:8:282:0:0:0,-2.40824,-10 scaffold_121 2671005 . A G 73.3159 . AB=0.147465;ABP=237.259;AC=7;AF=0.0380435;AN=184;AO=105;CIGAR=1X;DP=3389;DPB=3389;DPRA=1.23409;EPP=205.702;EPPR=1108.12;GTI=12;LEN=1;MEANALT=1.06977;MQM=52.1905;MQMR=47.9811;NS=92;NUMALT=1;ODDS=16.8816;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3684;QR=118841;RO=3280;RPP=205.702;RPPR=160.67;RUN=1;SAF=105;SAP=231.015;SAR=0;SRF=2390;SRP=1492.59;SRR=890;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:60:57:2081:2:76:0,-7.53419,-10 0/0:99:24:23:863:1:38:0,-2.04451,-10 0/0:99:32:32:1153:0:0:0,-9.63296,-10 0/0:99:46:46:1670:0:0:0,-10,-10 0/0:99:11:10:371:1:38:-1.53006,0,-10 0/0:99:12:12:405:0:0:0,-3.61236,-10 0/0:99:34:31:1094:3:114:-4.18197,0,-10 0/1:73.3159:35:31:1112:4:148:-7.87295,0,-10 0/0:99:15:15:545:0:0:0,-4.51545,-10 0/0:99:14:14:492:0:0:0,-4.21442,-10 0/0:99:16:16:572:0:0:0,-4.81648,-10 0/0:99:17:16:597:1:38:0,-0.087061,-10 0/0:99:40:38:1378:2:71:0,-2.40411,-10 0/0:99:33:32:1160:1:38:0,-4.61548,-10 0/0:99:20:19:633:1:38:0,-0.91957,-10 0/0:99:32:32:1139:0:0:0,-9.63296,-10 0/0:99:17:17:594:0:0:0,-5.11751,-10 0/0:99:29:29:1081:0:0:0,-8.72987,-10 0/1:73.3159:13:10:352:3:111:-8.90298,0,-10 0/0:99:17:17:603:0:0:0,-5.11751,-10 0/0:99:24:24:860:0:0:0,-7.22472,-10 0/0:99:43:43:1513:0:0:0,-10,-10 0/1:73.3159:22:19:707:3:114:-7.20486,0,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:99:38:36:1261:2:76:0,-1.37218,-10 0/0:99:41:38:1369:3:114:-2.32553,0,-10 0/0:99:62:61:2097:1:14:0,-10,-10 0/0:99:48:45:1688:3:112:-0.241839,0,-10 0/0:99:76:75:2763:1:38:0,-10,-10 0/0:99:52:50:1818:1:38:0,-10,-10 0/0:99:18:18:662:0:0:0,-5.41854,-10 0/0:99:25:22:799:3:114:-6.47598,0,-10 0/0:99:68:68:2459:0:0:0,-10,-10 0/0:99:30:30:1079:0:0:0,-9.0309,-10 0/1:73.3159:53:47:1715:6:204:-10,0,-10 0/0:99:29:29:1030:0:0:0,-8.72987,-10 0/0:99:38:38:1408:0:0:0,-10,-10 0/0:99:44:43:1568:0:0:0,-10,-10 0/0:99:85:81:2850:4:128:0,-7.44117,-10 0/1:73.3159:24:20:722:4:146:-10,0,-10 0/0:99:29:29:1025:0:0:0,-8.72987,-10 0/0:99:43:40:1445:3:114:-1.78706,0,-10 0/0:99:46:43:1593:3:112:-0.787225,0,-10 0/0:99:30:30:1040:0:0:0,-9.0309,-10 0/0:99:28:28:1047:0:0:0,-8.42884,-10 0/0:99:23:23:818:0:0:0,-6.92369,-10 0/0:99:66:65:2427:1:38:0,-10,-10 0/0:99:47:47:1703:0:0:0,-10,-10 0/0:99:43:43:1597:0:0:0,-10,-10 0/0:99:85:82:3002:3:90:0,-10,-10 0/0:99:54:54:1949:0:0:0,-10,-10 0/0:99:45:44:1574:1:38:0,-8.09314,-10 0/0:99:36:34:1242:2:52:0,-3.09774,-10 0/0:99:20:18:634:2:76:-3.47815,0,-10 0/0:99:54:54:1998:0:0:0,-10,-10 0/0:99:47:45:1626:2:76:0,-3.89458,-10 0/0:99:28:28:947:0:0:0,-8.42884,-10 0/0:99:10:10:338:0:0:0,-3.0103,-10 0/0:99:41:38:1429:3:94:-0.458861,0,-10 0/1:73.3159:28:22:814:6:228:-10,0,-10 0/0:99:59:59:2143:0:0:0,-10,-10 0/0:99:65:65:2354:0:0:0,-10,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:99:30:30:1118:0:0:0,-9.0309,-10 0/0:99:64:63:2357:1:38:0,-10,-10 0/0:99:50:50:1817:0:0:0,-10,-10 0/0:99:17:17:632:0:0:0,-5.11751,-10 0/0:99:38:36:1291:2:66:0,-2.32218,-10 0/0:99:40:40:1484:0:0:0,-10,-10 0/0:99:52:49:1778:2:67:0,-6.08702,-10 0/0:99:57:55:2018:2:59:0,-8.35068,-10 0/0:99:46:46:1648:0:0:0,-10,-10 0/0:99:29:29:1017:0:0:0,-8.72987,-10 0/1:73.3159:42:36:1248:6:219:-10,0,-10 0/0:99:30:29:1043:1:38:0,-3.75378,-10 0/0:99:48:48:1729:0:0:0,-10,-10 0/0:99:17:16:607:1:38:0,-0.087061,-10 0/0:99:47:47:1646:0:0:0,-10,-10 0/0:99:20:19:668:1:38:0,-0.91957,-10 0/0:99:19:19:659:0:0:0,-5.71957,-10 0/0:99:64:60:2170:4:152:-0.597111,0,-10 0/0:99:46:42:1513:4:125:-2.9278,0,-10 0/0:99:28:28:1033:0:0:0,-8.42884,-10 0/0:99:38:38:1425:0:0:0,-10,-10 0/0:99:9:9:332:0:0:0,-2.70927,-10 0/0:99:9:7:263:2:76:-6.06703,0,-10 0/0:99:52:52:1937:0:0:0,-10,-10 0/0:99:53:50:1855:3:42:0,-7.66489,-10 0/0:99:13:13:469:0:0:0,-3.91339,-10 0/0:99:18:18:681:0:0:0,-5.41854,-10 0/0:99:24:24:851:0:0:0,-7.22472,-10 0/0:99:64:64:2312:0:0:0,-10,-10 scaffold_140 94692 . G A 595.577 . AB=0.564103;ABP=4.40227;AC=1;AF=0.00543478;AN=184;AO=30;CIGAR=1X;DP=2514;DPB=2514;DPRA=1.57548;EPP=3.0103;EPPR=3.4733;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9327;NS=92;NUMALT=1;ODDS=6.33287;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=976;QR=90754;RO=2481;RPP=59.7581;RPPR=5355.75;RUN=1;SAF=14;SAP=3.29983;SAR=16;SRF=1225;SRP=3.85141;SRR=1256;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:93.7397:25:25:903:0:0:0,-7.52575,-10 0/0:60.6281:14:14:510:0:0:0,-4.21442,-10 0/0:99:29:29:1073:0:0:0,-8.72987,-10 0/0:81.7003:21:21:783:0:0:0,-6.32163,-10 0/0:57.6178:13:13:490:0:0:0,-3.91339,-10 0/0:42.5663:8:8:299:0:0:0,-2.40824,-10 0/0:99:54:53:1979:1:16:0,-10,-10 0/0:99:33:33:1170:0:0:0,-9.93399,-10 0/0:78.6899:20:20:733:0:0:0,-6.0206,-10 0/0:27.5148:3:3:105:0:0:0,-0.90309,-9.8 0/0:36.5457:6:6:227:0:0:0,-1.80618,-10 0/0:63.6384:15:15:555:0:0:0,-4.51545,-10 0/0:99:53:53:1962:0:0:0,-10,-10 0/0:99:43:43:1581:0:0:0,-10,-10 0/0:99:37:36:1320:1:16:0,-7.96991,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:99:39:39:1443:0:0:0,-10,-10 0/0:51.5972:11:11:408:0:0:0,-3.31133,-10 0/0:90.7303:24:24:849:0:0:0,-7.22472,-10 0/0:99:55:55:2037:0:0:0,-10,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/0:99:42:42:1553:0:0:0,-10,-10 0/0:45.5766:9:9:337:0:0:0,-2.70927,-10 0/0:67.6671:26:25:874:1:16:0,-4.81181,-10 0/0:84.7103:22:22:789:0:0:0,-6.62266,-10 0/0:99:38:38:1361:0:0:0,-10,-10 0/0:81.7003:21:21:775:0:0:0,-6.32163,-10 0/0:81.7003:21:21:773:0:0:0,-6.32163,-10 0/0:99:31:31:1071:0:0:0,-9.33193,-10 0/0:99:48:47:1649:0:0:0,-10,-10 0/0:48.5869:10:10:336:0:0:0,-3.0103,-10 0/0:54.6075:12:12:443:0:0:0,-3.61236,-10 0/0:93.7397:25:25:935:0:0:0,-7.52575,-10 0/0:84.7103:22:22:810:0:0:0,-6.62266,-10 0/0:99:32:32:1188:0:0:0,-9.63296,-10 0/0:54.6075:12:12:450:0:0:0,-3.61236,-10 0/0:75.6796:19:19:708:0:0:0,-5.71957,-10 0/0:99:62:62:2301:0:0:0,-10,-10 0/0:69.659:17:17:633:0:0:0,-5.11751,-10 0/0:99:27:27:963:0:0:0,-8.12781,-10 0/0:99:36:36:1308:0:0:0,-10,-10 0/0:99:29:29:1077:0:0:0,-8.72987,-10 0/0:67.6671:26:25:897:1:16:0,-4.81181,-10 0/0:99:42:42:1538:0:0:0,-10,-10 0/0:90.7303:24:24:900:0:0:0,-7.22472,-10 0/0:87.7204:23:23:868:0:0:0,-6.92369,-10 0/0:99:73:72:2609:1:16:0,-10,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:47.9572:19:18:655:1:16:0,-2.84082,-10 0/0:99:49:49:1760:0:0:0,-10,-10 0/0:81.7003:21:21:787:0:0:0,-6.32163,-10 0/0:97.6547:54:52:1865:2:47:0,-8.63498,-10 0/0:90.7303:24:24:893:0:0:0,-7.22472,-10 0/0:36.5457:6:6:227:0:0:0,-1.80618,-10 0/0:99:48:48:1773:0:0:0,-10,-10 0/0:84.7103:22:22:795:0:0:0,-6.62266,-10 0/0:99:33:33:1175:0:0:0,-9.93399,-10 0/0:42.5663:8:8:277:0:0:0,-2.40824,-10 0/0:87.7204:23:23:857:0:0:0,-6.92369,-10 0/0:51.5972:11:11:396:0:0:0,-3.31133,-10 0/0:99:45:45:1624:0:0:0,-10,-10 0/0:99:30:30:1139:0:0:0,-9.0309,-10 0/0:99:68:68:2484:0:0:0,-10,-10 0/0:96.7484:26:26:962:0:0:0,-7.82678,-10 0/0:69.659:17:17:628:0:0:0,-5.11751,-10 0/0:99:41:41:1514:0:0:0,-10,-10 0/0:96.7484:26:26:970:0:0:0,-7.82678,-10 0/0:75.6796:20:19:663:0:0:0,-5.71957,-10 0/0:99:39:39:1445:0:0:0,-10,-10 0/0:78.6899:20:20:717:0:0:0,-6.0206,-10 0/0:99:43:43:1538:0:0:0,-10,-10 0/1:99:39:17:638:22:833:-10,0,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:72.6693:18:18:675:0:0:0,-5.41854,-10 0/0:99:35:35:1272:0:0:0,-10,-10 0/0:78.6899:20:20:725:0:0:0,-6.0206,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/0:66.6487:16:16:606:0:0:0,-4.81648,-10 0/0:39.556:7:7:264:0:0:0,-2.10721,-10 0/0:57.6178:14:13:492:0:0:0,-3.91339,-10 0/0:99:40:40:1502:0:0:0,-10,-10 0/0:99:31:31:1090:0:0:0,-9.33193,-10 0/0:99:29:29:1081:0:0:0,-8.72987,-10 0/0:99:27:27:998:0:0:0,-8.12781,-10 0/0:99:27:27:968:0:0:0,-8.12781,-10 0/0:48.5869:10:10:369:0:0:0,-3.0103,-10 0/0:72.6693:18:18:683:0:0:0,-5.41854,-10 0/0:72.6693:18:18:641:0:0:0,-5.41854,-10 0/0:39.556:7:7:264:0:0:0,-2.10721,-10 0/0:66.6487:16:16:581:0:0:0,-4.81648,-10 0/0:87.7204:23:23:836:0:0:0,-6.92369,-10 0/0:72.6693:18:18:649:0:0:0,-5.41854,-10 scaffold_140 469025 . G C 588.086 . AB=0.666667;ABP=11.6962;AC=2;AF=0.0108696;AN=184;AO=24;CIGAR=1X;DP=1933;DPB=1933;DPRA=0.85398;EPP=6.26751;EPPR=5.74142;GTI=1;LEN=1;MEANALT=1;MQM=59.4583;MQMR=59.8706;NS=92;NUMALT=1;ODDS=7.39366;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=888;QR=69666;RO=1909;RPP=55.1256;RPPR=4044.78;RUN=1;SAF=15;SAP=6.26751;SAR=9;SRF=942;SRP=3.72123;SRR=967;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.2184:12:12:430:0:0:0,-3.61236,-10 0/0:50.1772:8:8:284:0:0:0,-2.40824,-10 0/0:86.3005:20:20:738:0:0:0,-6.0206,-10 0/0:80.2802:18:18:672:0:0:0,-5.41854,-10 0/0:74.2596:16:16:606:0:0:0,-4.81648,-10 0/0:50.1772:8:8:277:0:0:0,-2.40824,-10 0/0:99:43:43:1604:0:0:0,-10,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/1:0.00039818:12:0:0:12:456:-10,-3.61236,0 0/0:50.1772:8:8:301:0:0:0,-2.40824,-10 0/0:41.1463:5:5:190:0:0:0,-1.50515,-10 0/0:47.1669:7:7:263:0:0:0,-2.10721,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:99:36:36:1314:0:0:0,-10,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:92.3203:22:22:834:0:0:0,-6.62266,-10 0/0:59.2081:11:11:400:0:0:0,-3.31133,-10 0/0:86.3005:20:20:731:0:0:0,-6.0206,-10 0/0:99:42:42:1546:0:0:0,-10,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:99:27:27:977:0:0:0,-8.12781,-10 0/0:74.2596:16:16:602:0:0:0,-4.81648,-10 0/0:92.3203:22:22:784:0:0:0,-6.62266,-10 0/0:99:28:28:1059:0:0:0,-8.42884,-10 0/0:89.3106:21:21:766:0:0:0,-6.32163,-10 0/0:92.3203:22:22:809:0:0:0,-6.62266,-10 0/0:99:26:26:914:0:0:0,-7.82678,-10 0/0:99:26:26:941:0:0:0,-7.82678,-10 0/0:99:41:41:1511:0:0:0,-10,-10 0/0:44.1566:6:6:219:0:0:0,-1.80618,-10 0/0:44.1566:6:6:218:0:0:0,-1.80618,-10 0/0:71.2493:15:15:551:0:0:0,-4.51545,-10 0/0:65.2287:13:13:480:0:0:0,-3.91339,-10 0/0:89.3106:21:21:763:0:0:0,-6.32163,-10 0/0:47.1669:7:7:266:0:0:0,-2.10721,-10 0/0:68.239:14:14:524:0:0:0,-4.21442,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:59.2081:11:11:360:0:0:0,-3.31133,-10 0/0:98.3376:24:24:903:0:0:0,-7.22472,-10 0/0:74.2596:16:16:592:0:0:0,-4.81648,-10 0/0:65.2287:13:13:466:0:0:0,-3.91339,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:65.2287:13:13:468:0:0:0,-3.91339,-10 0/0:99:46:46:1680:0:0:0,-10,-10 0/0:95.3295:23:23:818:0:0:0,-6.92369,-10 0/0:65.2287:13:13:491:0:0:0,-3.91339,-10 0/0:99:41:41:1514:0:0:0,-10,-10 0/0:77.2699:17:17:598:0:0:0,-5.11751,-10 0/0:99:36:36:1340:0:0:0,-10,-10 0/0:65.2287:13:13:463:0:0:0,-3.91339,-10 0/0:44.1566:6:6:228:0:0:0,-1.80618,-10 0/0:99:38:38:1348:0:0:0,-10,-10 0/0:65.2287:13:13:465:0:0:0,-3.91339,-10 0/0:99:25:25:868:0:0:0,-7.52575,-10 0/0:44.1566:6:6:228:0:0:0,-1.80618,-10 0/0:95.3295:23:23:868:0:0:0,-6.92369,-10 0/0:53.1875:9:9:319:0:0:0,-2.70927,-10 0/0:99:30:30:1079:0:0:0,-9.0309,-10 0/0:92.3203:22:22:813:0:0:0,-6.62266,-10 0/0:99:42:42:1477:0:0:0,-10,-10 0/0:95.3295:23:23:808:0:0:0,-6.92369,-10 0/0:53.1875:9:9:335:0:0:0,-2.70927,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/1:99:24:12:456:12:432:-10,0,-10 0/0:56.1978:10:10:349:0:0:0,-3.0103,-10 0/0:99:43:43:1570:0:0:0,-10,-10 0/0:50.1772:8:8:289:0:0:0,-2.40824,-10 0/0:95.3295:23:23:863:0:0:0,-6.92369,-10 0/0:99:34:34:1226:0:0:0,-10,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:86.3005:20:20:707:0:0:0,-6.0206,-10 0/0:99:27:27:1014:0:0:0,-8.12781,-10 0/0:86.3005:20:20:750:0:0:0,-6.0206,-10 0/0:62.2184:12:12:446:0:0:0,-3.61236,-10 0/0:74.2596:16:16:580:0:0:0,-4.81648,-10 0/0:59.2081:11:11:352:0:0:0,-3.31133,-10 0/0:98.3376:24:24:830:0:0:0,-7.22472,-10 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:99:30:30:1081:0:0:0,-9.0309,-10 0/0:89.3106:21:21:757:0:0:0,-6.32163,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:38.136:4:4:135:0:0:0,-1.20412,-10 0/0:71.2493:15:15:565:0:0:0,-4.51545,-10 0/0:62.2184:12:12:455:0:0:0,-3.61236,-10 0/0:32.1154:2:2:63:0:0:0,-0.60206,-5.985 0/0:62.2184:12:12:437:0:0:0,-3.61236,-10 0/0:62.2184:12:12:394:0:0:0,-3.61236,-10 0/0:71.2493:15:15:555:0:0:0,-4.51545,-10 scaffold_140 469036 . TG T 527.3 . AB=0.571429;ABP=4.56135;AC=1;AF=0.00543478;AN=184;AO=20;CIGAR=1M1D1M;DP=1935;DPB=1928.33;DPRA=1.67632;EPP=4.74748;EPPR=3.6686;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9089;NS=92;NUMALT=1;ODDS=3.84245;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=756;QR=68809;RO=1900;RPP=46.4397;RPPR=3922.98;RUN=1;SAF=8;SAP=4.74748;SAR=12;SRF=938;SRP=3.6686;SRR=962;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:46.9554:12:12:439:0:0:0,-3.61236,-10 0|0:34.9142:8:8:289:0:0:0,-2.40824,-10 0|0:71.0378:20:20:717:0:0:0,-6.0206,-10 0|0:65.0172:18:18:665:0:0:0,-5.41854,-10 0|0:58.9966:16:16:560:0:0:0,-4.81648,-10 0|0:34.9142:8:8:295:0:0:0,-2.40824,-10 0|0:99:43:43:1588:0:0:0,-10,-10 0|0:89.0993:27:26:916:0:0:0,-7.82678,-10 0|0:46.9554:12:12:433:0:0:0,-3.61236,-10 0|0:31.9039:7:7:265:0:0:0,-2.10721,-10 0|0:25.8833:5:5:178:0:0:0,-1.50515,-10 0|0:31.9039:7:7:240:0:0:0,-2.10721,-10 0|0:99:30:30:1074:0:0:0,-9.0309,-10 0|0:99:34:34:1236:0:0:0,-10,-10 0|0:99:36:36:1296:0:0:0,-10,-10 0|0:99:33:33:1199:0:0:0,-9.93399,-10 0|0:77.0584:22:22:812:0:0:0,-6.62266,-10 0|0:40.9348:11:10:365:0:0:0,-3.0103,-10 0|0:71.0378:20:20:738:0:0:0,-6.0206,-10 0|0:99:42:42:1503:0:0:0,-10,-10 0|0:99:30:30:1101:0:0:0,-9.0309,-10 0|0:92.1094:27:27:977:0:0:0,-8.12781,-10 0|0:58.9966:16:16:606:0:0:0,-4.81648,-10 0|0:77.0584:22:22:782:0:0:0,-6.62266,-10 0|0:95.1191:28:28:1027:0:0:0,-8.42884,-10 0|0:74.0481:21:21:767:0:0:0,-6.32163,-10 0|0:80.0687:24:23:825:0:0:0,-6.92369,-10 0|0:86.0892:26:25:878:0:0:0,-7.52575,-10 0|0:89.0993:26:26:949:0:0:0,-7.82678,-10 0|0:99:41:40:1456:0:0:0,-10,-10 0|0:28.8936:6:6:226:0:0:0,-1.80618,-10 0|0:28.8936:6:6:208:0:0:0,-1.80618,-10 0|0:55.9863:15:15:551:0:0:0,-4.51545,-10 0|0:49.9657:13:13:469:0:0:0,-3.91339,-10 0|0:74.0481:21:21:750:0:0:0,-6.32163,-10 0|0:31.9039:7:7:252:0:0:0,-2.10721,-10 0|0:52.976:14:14:515:0:0:0,-4.21442,-10 0|0:99:31:31:1147:0:0:0,-9.33193,-10 0|0:92.1094:27:27:1003:0:0:0,-8.12781,-10 0|0:40.9348:11:10:343:0:0:0,-3.0103,-10 0|0:83.0787:24:24:882:0:0:0,-7.22472,-10 0|0:58.9966:16:16:580:0:0:0,-4.81648,-10 0|0:49.9657:13:13:428:0:0:0,-3.91339,-10 0|0:99:31:31:1094:0:0:0,-9.33193,-10 0|0:99:30:30:1095:0:0:0,-9.0309,-10 0|0:49.9657:13:13:465:0:0:0,-3.91339,-10 0|0:99:46:46:1702:0:0:0,-10,-10 0|0:80.0687:23:23:837:0:0:0,-6.92369,-10 0|0:49.9657:13:13:479:0:0:0,-3.91339,-10 0|0:99:41:41:1506:0:0:0,-10,-10 0|0:62.0069:17:17:599:0:0:0,-5.11751,-10 0|0:99:36:35:1295:0:0:0,-10,-10 0|0:52.976:14:14:501:0:0:0,-4.21442,-10 0|0:28.8936:6:6:225:0:0:0,-1.80618,-10 0|0:99:38:38:1364:0:0:0,-10,-10 0|0:49.9657:13:13:453:0:0:0,-3.91339,-10 0|0:86.0892:25:25:886:0:0:0,-7.52575,-10 0|0:28.8936:6:6:222:0:0:0,-1.80618,-10 0|0:77.0584:23:22:801:0:0:0,-6.62266,-10 0|0:37.9245:9:9:336:0:0:0,-2.70927,-10 0|0:98.1283:30:29:1025:0:0:0,-8.72987,-10 0|0:77.0584:22:22:800:0:0:0,-6.62266,-10 0|0:99:42:40:1415:0:0:0,-10,-10 0|0:80.0687:23:23:832:0:0:0,-6.92369,-10 0|0:37.9245:9:9:334:0:0:0,-2.70927,-10 0|0:99:33:32:1135:0:0:0,-9.63296,-10 0|0:83.0787:24:24:872:0:0:0,-7.22472,-10 0|0:40.9348:10:10:375:0:0:0,-3.0103,-10 0|0:99:43:43:1551:0:0:0,-10,-10 0|0:34.9142:8:8:297:0:0:0,-2.40824,-10 0|0:80.0687:23:23:846:0:0:0,-6.92369,-10 0|0:99:34:34:1246:0:0:0,-10,-10 0|0:98.1283:29:29:1028:0:0:0,-8.72987,-10 0|0:71.0378:20:20:739:0:0:0,-6.0206,-10 0|0:92.1094:27:27:1007:0:0:0,-8.12781,-10 0|0:71.0378:20:20:718:0:0:0,-6.0206,-10 0|0:46.9554:12:12:449:0:0:0,-3.61236,-10 0|0:58.9966:16:16:575:0:0:0,-4.81648,-10 0|0:43.9451:11:11:377:0:0:0,-3.31133,-10 0|0:83.0787:24:24:870:0:0:0,-7.22472,-10 0|0:99:32:31:1105:0:0:0,-9.33193,-10 0|0:98.1283:30:29:1031:0:0:0,-8.72987,-10 0|0:74.0481:21:21:751:0:0:0,-6.32163,-10 0|1:99:35:15:557:20:756:-10,0,-10 0|0:83.0787:25:24:904:0:0:0,-7.22472,-10 0|0:22.873:4:4:142:0:0:0,-1.20412,-10 0|0:55.9863:15:15:546:0:0:0,-4.51545,-10 0|0:46.9554:12:12:434:0:0:0,-3.61236,-10 0|0:16.8524:2:2:66:0:0:0,-0.60206,-6.27 0|0:46.9554:12:12:424:0:0:0,-3.61236,-10 0|0:46.9554:12:12:422:0:0:0,-3.61236,-10 0|0:55.9863:15:15:546:0:0:0,-4.51545,-10 scaffold_140 596661 . A C 24157.7 . AB=0.535065;ABP=7.122;AC=90;AF=0.48913;AN=184;AO=845;CIGAR=1X;DP=1664;DPB=1664;DPRA=1.18591;EPP=5.47987;EPPR=3.05277;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.037468;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=30820;QR=30031;RO=818;RPP=1837.9;RPPR=1753.31;RUN=1;SAF=438;SAP=5.47987;SAR=407;SRF=410;SRP=3.02092;SRR=408;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:26.5389:11:11:397:0:0:0,-3.31133,-10 0/0:17.508:8:8:292:0:0:0,-2.40824,-10 0/0:35.5698:14:14:505:0:0:0,-4.21442,-10 0/0:29.5492:12:12:443:0:0:0,-3.61236,-10 1/1:31.7022:11:0:0:11:415:-10,-3.31133,0 1/1:28.6919:10:0:0:10:377:-10,-3.0103,0 1/1:99:35:0:0:35:1232:-10,-10,0 1/1:55.7846:19:0:0:19:718:-10,-5.71957,0 1/1:28.6919:10:0:0:10:372:-10,-3.0103,0 0/1:0.144382:1:0:0:1:38:-3.8,-0.30103,0 1/1:25.6816:9:0:0:9:323:-10,-2.70927,0 1/1:7.6198:3:0:0:3:113:-10,-0.90309,0 1/1:91.9068:31:0:0:31:1122:-10,-9.33193,0 1/1:99:40:0:0:40:1481:-10,-10,0 0/0:59.6522:22:22:803:0:0:0,-6.62266,-10 1/1:64.8155:22:0:0:22:794:-10,-6.62266,0 1/1:67.8258:23:0:0:23:851:-10,-6.92369,0 1/1:25.6816:9:0:0:9:341:-10,-2.70927,0 1/1:94.9157:32:0:0:32:1127:-10,-9.63296,0 0/0:59.6522:22:22:827:0:0:0,-6.62266,-10 0/0:44.6007:17:17:609:0:0:0,-5.11751,-10 0/0:47.611:18:18:675:0:0:0,-5.41854,-10 0/1:0.757316:5:5:188:0:0:0,-1.50515,-10 0/0:53.6316:20:20:735:0:0:0,-6.0206,-10 1/1:40.7331:14:0:0:14:527:-10,-4.21442,0 0/0:62.6625:23:23:813:0:0:0,-6.92369,-10 1/1:43.7434:15:0:0:15:567:-10,-4.51545,0 1/1:34.7125:12:0:0:12:405:-10,-3.61236,0 0/0:44.6007:17:17:630:0:0:0,-5.11751,-10 1/1:99:43:0:0:43:1494:-10,-10,0 0/1:0.362171:4:4:148:0:0:0,-1.20412,-10 1/1:19.661:7:0:0:7:240:-10,-2.10721,0 0/0:41.5904:16:16:595:0:0:0,-4.81648,-10 0/0:32.5595:13:13:464:0:0:0,-3.91339,-10 1/1:46.7537:16:0:0:16:594:-10,-4.81648,0 0/0:11.4874:6:6:227:0:0:0,-1.80618,-10 0/0:32.5595:13:13:485:0:0:0,-3.91339,-10 0/1:99:25:9:326:16:598:-10,0,-10 0/0:38.5801:15:15:528:0:0:0,-4.51545,-10 0/1:99:11:3:114:8:304:-10,0,-9.54615 0/1:99:20:11:396:9:338:-10,0,-10 0/1:22.0418:23:21:770:2:54:-0.609431,0,-10 0/0:41.5904:16:16:593:0:0:0,-4.81648,-10 0/1:99:35:13:492:22:798:-10,0,-10 0/0:74.7037:27:27:986:0:0:0,-8.12781,-10 0/1:99:15:6:226:9:335:-10,0,-10 0/1:99:37:16:598:21:784:-10,0,-10 0/0:56.6419:21:21:791:0:0:0,-6.32163,-10 0/0:35.5698:14:14:508:0:0:0,-4.21442,-10 1/1:99:37:0:0:37:1330:-10,-10,0 1/1:34.7125:12:0:0:12:424:-10,-3.61236,0 0/1:99:30:17:631:13:454:-10,0,-10 1/1:43.7434:15:0:0:15:567:-10,-4.51545,0 1/1:28.6919:10:0:0:10:357:-10,-3.0103,0 0/1:99:32:11:388:21:750:-10,0,-10 0/0:20.5183:9:9:322:0:0:0,-2.70927,-10 0/0:32.5595:13:13:494:0:0:0,-3.91339,-10 1/1:22.6713:8:0:0:8:303:-10,-2.40824,0 0/0:44.6007:17:17:641:0:0:0,-5.11751,-10 0/0:23.5286:10:10:357:0:0:0,-3.0103,-10 1/1:46.7537:16:0:0:16:585:-10,-4.81648,0 0/0:62.6625:23:23:833:0:0:0,-6.92369,-10 0/0:99:38:38:1391:0:0:0,-10,-10 1/1:55.7846:19:0:0:19:685:-10,-5.71957,0 0/0:23.5286:10:10:372:0:0:0,-3.0103,-10 1/1:61.8052:21:0:0:21:797:-10,-6.32163,0 0/1:99:24:11:390:13:465:-10,0,-10 1/1:31.7022:11:0:0:11:407:-10,-3.31133,0 0/1:99:29:11:396:18:673:-10,0,-10 1/1:19.661:7:0:0:7:240:-10,-2.10721,0 0/0:32.5595:13:13:480:0:0:0,-3.91339,-10 0/1:99:44:25:945:19:721:-10,0,-10 1/1:91.9068:31:0:0:31:1146:-10,-9.33193,0 1/1:55.7846:19:0:0:19:707:-10,-5.71957,0 0/1:99:34:19:697:15:545:-10,0,-10 1/1:13.6404:5:0:0:5:177:-10,-1.50515,0 0/0:41.5904:17:16:565:0:0:0,-4.81648,-10 1/1:49.764:17:0:0:17:600:-10,-5.11751,0 0/0:11.4874:6:6:228:0:0:0,-1.80618,-10 0/0:11.4874:6:6:227:0:0:0,-1.80618,-10 0/0:99:39:39:1465:0:0:0,-10,-10 0/0:74.7037:27:27:1013:0:0:0,-8.12781,-10 0/1:99:21:5:179:16:576:-10,0,-10 1/1:61.8052:21:0:0:21:757:-10,-6.32163,0 1/1:67.8258:23:0:0:23:872:-10,-6.92369,0 1/1:16.6507:6:0:0:6:226:-10,-1.80618,0 0/0:62.6625:23:23:851:0:0:0,-6.92369,-10 0/0:35.5698:14:14:502:0:0:0,-4.21442,-10 0/1:47:4:1:38:3:114:-10,0,-3.19794 0/0:32.5595:13:13:484:0:0:0,-3.91339,-10 0/0:20.5183:9:9:333:0:0:0,-2.70927,-10 0/0:50.6213:19:19:645:0:0:0,-5.71957,-10 scaffold_140 596683 . C T 382.686 . AB=0.483871;ABP=3.08035;AC=1;AF=0.00543478;AN=184;AO=16;CIGAR=1X;DP=1661;DPB=1661;DPRA=1.5411;EPP=7.89611;EPPR=4.12046;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=5.21777;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=608;QR=60268;RO=1645;RPP=37.7539;RPPR=3575.08;RUN=1;SAF=11;SAP=7.89611;SAR=5;SRF=837;SRP=4.12046;SRR=808;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.8067:11:11:391:0:0:0,-3.31133,-10 0/0:40.7655:7:7:265:0:0:0,-2.10721,-10 0/0:61.8376:14:14:514:0:0:0,-4.21442,-10 0/0:55.817:12:12:452:0:0:0,-3.61236,-10 0/0:52.8067:11:11:412:0:0:0,-3.31133,-10 0/0:49.7964:10:10:374:0:0:0,-3.0103,-10 0/0:99:35:35:1232:0:0:0,-10,-10 0/0:76.8891:19:19:716:0:0:0,-5.71957,-10 0/0:49.7964:10:10:375:0:0:0,-3.0103,-10 0/0:22.7037:1:1:38:0:0:0,-0.30103,-3.8 0/0:46.7861:9:9:312:0:0:0,-2.70927,-10 0/0:28.7243:3:3:113:0:0:0,-0.90309,-10 0/0:99:31:31:1117:0:0:0,-9.33193,-10 0/0:99:40:40:1472:0:0:0,-10,-10 0/0:82.9095:21:21:758:0:0:0,-6.32163,-10 0/0:85.9201:22:22:795:0:0:0,-6.62266,-10 0/0:88.9297:23:23:816:0:0:0,-6.92369,-10 0/0:46.7861:9:9:331:0:0:0,-2.70927,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:82.9095:21:21:788:0:0:0,-6.32163,-10 0/0:70.8685:17:17:623:0:0:0,-5.11751,-10 0/0:73.8788:18:18:661:0:0:0,-5.41854,-10 0/0:34.7449:5:5:186:0:0:0,-1.50515,-10 0/0:79.8993:20:20:742:0:0:0,-6.0206,-10 0/0:61.8376:14:14:527:0:0:0,-4.21442,-10 0/0:88.9297:23:23:798:0:0:0,-6.92369,-10 0/0:64.8479:15:15:548:0:0:0,-4.51545,-10 0/0:55.817:12:12:447:0:0:0,-3.61236,-10 0/0:70.8685:17:17:641:0:0:0,-5.11751,-10 0/0:99:43:43:1533:0:0:0,-10,-10 0/0:31.7346:4:4:130:0:0:0,-1.20412,-10 0/0:40.7655:7:7:266:0:0:0,-2.10721,-10 0/0:67.8582:16:16:586:0:0:0,-4.81648,-10 0/0:58.8273:13:13:460:0:0:0,-3.91339,-10 0/0:67.8582:16:16:582:0:0:0,-4.81648,-10 0/0:37.7552:6:6:228:0:0:0,-1.80618,-10 0/0:58.8273:13:13:483:0:0:0,-3.91339,-10 0/0:94.9488:25:25:914:0:0:0,-7.52575,-10 0/0:64.8479:15:15:559:0:0:0,-4.51545,-10 0/0:52.8067:11:11:418:0:0:0,-3.31133,-10 0/0:79.8993:20:20:731:0:0:0,-6.0206,-10 0/0:88.9297:23:23:816:0:0:0,-6.92369,-10 0/0:67.8582:16:16:601:0:0:0,-4.81648,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:99:27:27:988:0:0:0,-8.12781,-10 0/0:64.8479:15:15:565:0:0:0,-4.51545,-10 0/0:99:37:37:1358:0:0:0,-10,-10 0/0:82.9095:21:21:794:0:0:0,-6.32163,-10 0/0:61.8376:14:14:521:0:0:0,-4.21442,-10 0/0:99:37:37:1339:0:0:0,-10,-10 0/0:55.817:12:12:456:0:0:0,-3.61236,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:64.8479:15:15:563:0:0:0,-4.51545,-10 0/0:49.7964:10:10:343:0:0:0,-3.0103,-10 0/0:99:32:32:1161:0:0:0,-9.63296,-10 0/0:46.7861:9:9:340:0:0:0,-2.70927,-10 0/0:58.8273:13:13:493:0:0:0,-3.91339,-10 0/0:43.7758:8:8:297:0:0:0,-2.40824,-10 0/0:70.8685:17:17:621:0:0:0,-5.11751,-10 0/0:49.7964:10:10:371:0:0:0,-3.0103,-10 0/0:67.8582:16:16:596:0:0:0,-4.81648,-10 0/0:88.9297:23:23:836:0:0:0,-6.92369,-10 0/0:99:38:38:1394:0:0:0,-10,-10 0/0:76.8891:19:19:703:0:0:0,-5.71957,-10 0/0:49.7964:10:10:372:0:0:0,-3.0103,-10 0/0:82.9095:21:21:790:0:0:0,-6.32163,-10 0/0:45.3902:24:23:857:1:38:0,-2.04451,-10 0/0:52.8067:11:11:416:0:0:0,-3.31133,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:40.7655:7:7:263:0:0:0,-2.10721,-10 0/0:58.8273:13:13:478:0:0:0,-3.91339,-10 0/0:99:44:44:1610:0:0:0,-10,-10 0/1:99:31:16:586:15:570:-10,0,-10 0/0:76.8891:19:19:713:0:0:0,-5.71957,-10 0/0:99:34:34:1252:0:0:0,-10,-10 0/0:34.7449:5:5:165:0:0:0,-1.50515,-10 0/0:70.8685:17:17:628:0:0:0,-5.11751,-10 0/0:70.8685:17:17:573:0:0:0,-5.11751,-10 0/0:37.7552:6:6:228:0:0:0,-1.80618,-10 0/0:37.7552:6:6:225:0:0:0,-1.80618,-10 0/0:99:39:39:1446:0:0:0,-10,-10 0/0:99:27:27:1023:0:0:0,-8.12781,-10 0/0:82.9095:21:21:786:0:0:0,-6.32163,-10 0/0:82.9095:21:21:767:0:0:0,-6.32163,-10 0/0:88.9297:23:23:864:0:0:0,-6.92369,-10 0/0:37.7552:6:6:228:0:0:0,-1.80618,-10 0/0:88.9297:23:23:793:0:0:0,-6.92369,-10 0/0:61.8376:14:14:509:0:0:0,-4.21442,-10 0/0:31.7346:4:4:152:0:0:0,-1.20412,-10 0/0:58.8273:13:13:471:0:0:0,-3.91339,-10 0/0:46.7861:9:9:318:0:0:0,-2.70927,-10 0/0:76.8891:19:19:650:0:0:0,-5.71957,-10 scaffold_140 657597 . A T 1459.56 . AB=0.659574;ABP=13.4056;AC=4;AF=0.0217391;AN=184;AO=59;CIGAR=1X;DP=1526;DPB=1526;DPRA=1.35314;EPP=4.81373;EPPR=6.71336;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9686;NS=92;NUMALT=1;ODDS=0.96898;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2126;QR=53689;RO=1466;RPP=131.127;RPPR=3186.39;RUN=1;SAF=33;SAP=4.81373;SAR=26;SRF=758;SRP=6.71336;SRR=708;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.5552:17:17:628:0:0:0,-5.11751,-10 0/0:16.4316:5:5:184:0:0:0,-1.50515,-10 0/0:34.4934:11:11:415:0:0:0,-3.31133,-10 0/0:22.4522:7:7:254:0:0:0,-2.10721,-10 0/0:28.4728:9:9:342:0:0:0,-2.70927,-10 0/0:25.4625:8:8:295:0:0:0,-2.40824,-10 0/0:99:37:37:1337:0:0:0,-10,-10 0/0:43.5243:14:14:486:0:0:0,-4.21442,-10 0/0:25.4625:8:8:304:0:0:0,-2.40824,-10 0/0:19.4419:6:6:223:0:0:0,-1.80618,-10 0/0:13.4213:4:4:130:0:0:0,-1.20412,-10 0/0:31.4831:10:10:328:0:0:0,-3.0103,-10 0/0:97.7074:32:32:1178:0:0:0,-9.63296,-10 0/0:94.6982:31:31:1103:0:0:0,-9.33193,-10 0/0:70.617:23:23:830:0:0:0,-6.92369,-10 0/0:58.5758:19:19:703:0:0:0,-5.71957,-10 0/0:40.514:13:13:487:0:0:0,-3.91339,-10 0/0:25.4625:8:8:301:0:0:0,-2.40824,-10 0/0:49.5449:16:16:606:0:0:0,-4.81648,-10 0/0:67.6067:22:22:801:0:0:0,-6.62266,-10 0/0:37.5037:12:12:455:0:0:0,-3.61236,-10 0/0:82.6581:27:27:977:0:0:0,-8.12781,-10 0/0:31.4831:10:10:354:0:0:0,-3.0103,-10 0/0:49.5449:16:16:605:0:0:0,-4.81648,-10 0/0:67.6067:22:22:823:0:0:0,-6.62266,-10 0/0:61.5861:20:20:735:0:0:0,-6.0206,-10 0/0:49.5449:16:16:608:0:0:0,-4.81648,-10 0/0:55.5655:18:18:664:0:0:0,-5.41854,-10 0/0:55.5655:18:18:665:0:0:0,-5.41854,-10 0/0:99:35:35:1276:0:0:0,-10,-10 0/0:10.411:3:3:114:0:0:0,-0.90309,-10 0/0:22.4522:7:7:266:0:0:0,-2.10721,-10 0/0:55.5655:18:18:669:0:0:0,-5.41854,-10 0/0:22.4522:7:7:266:0:0:0,-2.10721,-10 0/0:34.4934:11:11:417:0:0:0,-3.31133,-10 0/0:28.4728:9:9:340:0:0:0,-2.70927,-10 0/0:28.4728:9:9:337:0:0:0,-2.70927,-10 0/0:49.3115:24:23:825:1:16:0,-4.24451,-10 0/0:40.514:13:13:439:0:0:0,-3.91339,-10 0/0:40.514:13:13:481:0:0:0,-3.91339,-10 0/0:70.617:23:23:834:0:0:0,-6.92369,-10 0/0:46.5346:15:15:503:0:0:0,-4.51545,-10 0/0:43.5243:14:14:529:0:0:0,-4.21442,-10 0/0:58.5758:19:19:716:0:0:0,-5.71957,-10 0/0:67.6067:22:22:800:0:0:0,-6.62266,-10 0/0:49.5449:16:16:602:0:0:0,-4.81648,-10 0/0:99:37:36:1303:0:0:0,-10,-10 0/0:91.6885:30:30:1105:0:0:0,-9.0309,-10 0/0:28.4728:9:9:337:0:0:0,-2.70927,-10 0/0:79.6477:26:26:956:0:0:0,-7.82678,-10 0/0:22.4522:7:7:238:0:0:0,-2.10721,-10 0/0:99:37:37:1380:0:0:0,-10,-10 0/0:43.5243:14:14:515:0:0:0,-4.21442,-10 0/0:22.4522:7:7:244:0:0:0,-2.10721,-10 0/0:99:40:40:1452:0:0:0,-10,-10 0/0:40.514:13:13:493:0:0:0,-3.91339,-10 0/0:76.6375:25:25:915:0:0:0,-7.52575,-10 0/0:10.411:3:3:90:0:0:0,-0.90309,-8.4 0/0:58.5758:19:19:693:0:0:0,-5.71957,-10 0/0:24.8458:16:15:511:1:16:0,-2.01236,-10 0/0:82.6581:27:27:967:0:0:0,-8.12781,-10 0/0:52.5552:17:17:644:0:0:0,-5.11751,-10 0/0:85.6683:28:28:1012:0:0:0,-8.42884,-10 0/0:49.3115:24:23:817:1:16:0,-4.24451,-10 0/0:40.514:13:13:492:0:0:0,-3.91339,-10 0/0:70.617:23:23:831:0:0:0,-6.92369,-10 0/0:30.3549:18:17:620:1:16:0,-2.56327,-10 0/0:22.4522:7:7:263:0:0:0,-2.10721,-10 0/0:73.6273:24:24:883:0:0:0,-7.22472,-10 0/0:34.4934:11:11:391:0:0:0,-3.31133,-10 0/0:43.5243:14:14:505:0:0:0,-4.21442,-10 0/0:67.6067:22:22:797:0:0:0,-6.62266,-10 0/1:99:22:8:303:14:526:-10,0,-10 1/1:43.6335:24:0:0:24:895:-10,-7.22472,0 0/1:99:25:8:304:17:641:-10,0,-10 0/0:31.4831:10:10:351:0:0:0,-3.0103,-10 0/0:31.4831:10:10:374:0:0:0,-3.0103,-10 0/0:43.5243:14:14:529:0:0:0,-4.21442,-10 0/0:25.4625:8:8:296:0:0:0,-2.40824,-10 0/0:28.4728:9:9:307:0:0:0,-2.70927,-10 0/0:79.6477:26:26:981:0:0:0,-7.82678,-10 0/0:64.5964:21:21:786:0:0:0,-6.32163,-10 0/0:70.617:23:23:814:0:0:0,-6.92369,-10 0/0:64.5964:21:21:795:0:0:0,-6.32163,-10 0/0:58.5758:19:19:717:0:0:0,-5.71957,-10 0/0:7.40066:2:2:76:0:0:0,-0.60206,-7.22 0/0:43.5243:14:14:528:0:0:0,-4.21442,-10 0/0:34.4934:11:11:408:0:0:0,-3.31133,-10 0/0:19.4419:6:6:215:0:0:0,-1.80618,-10 0/0:25.4625:8:8:303:0:0:0,-2.40824,-10 0/0:46.5346:15:15:544:0:0:0,-4.51545,-10 0/0:31.4831:10:10:369:0:0:0,-3.0103,-10 scaffold_140 771210 . A G 1434.81 . AB=0.66;ABP=14.1282;AC=8;AF=0.0434783;AN=184;AO=60;CIGAR=1X;DP=1049;DPB=1049;DPRA=1.13546;EPP=4.31318;EPPR=3.11789;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9545;NS=92;NUMALT=1;ODDS=0.267262;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2168;QR=36297;RO=989;RPP=133.299;RPPR=2150.6;RUN=1;SAF=27;SAP=4.31318;SAR=33;SRF=491;SRP=3.11789;SRR=498;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:28.6273:7:7:262:0:0:0,-2.10721,-10 0/0:22.6067:5:5:189:0:0:0,-1.50515,-10 0/0:34.6479:9:9:323:0:0:0,-2.70927,-10 0/0:34.6479:9:9:342:0:0:0,-2.70927,-10 0/0:43.6788:12:12:442:0:0:0,-3.61236,-10 0/0:10.5655:1:1:27:0:0:0,-0.30103,-2.7 0/0:73.7818:22:22:793:0:0:0,-6.62266,-10 0/0:40.6685:11:11:384:0:0:0,-3.31133,-10 0/0:19.5964:4:4:152:0:0:0,-1.20412,-10 0/0:10.5655:1:1:38:0:0:0,-0.30103,-3.8 0/0:16.5861:3:3:108:0:0:0,-0.90309,-10 0/0:16.5861:3:3:110:0:0:0,-0.90309,-10 0/0:61.7406:18:18:683:0:0:0,-5.41854,-10 0/0:67.7612:20:20:719:0:0:0,-6.0206,-10 0/0:64.7509:19:19:713:0:0:0,-5.71957,-10 0/0:43.6788:12:12:437:0:0:0,-3.61236,-10 0/0:34.6479:9:9:336:0:0:0,-2.70927,-10 0/0:19.5964:4:4:152:0:0:0,-1.20412,-10 0/0:49.6994:14:14:514:0:0:0,-4.21442,-10 0/1:99:22:12:430:10:368:-10,0,-10 0/1:99:10:5:186:5:189:-10,0,-10 0/0:46.6891:13:13:488:0:0:0,-3.91339,-10 0/0:28.6273:7:7:262:0:0:0,-2.10721,-10 0/0:52.7097:15:15:552:0:0:0,-4.51545,-10 0/0:37.6582:10:10:370:0:0:0,-3.0103,-10 0/0:40.6685:11:11:384:0:0:0,-3.31133,-10 0/0:37.6582:10:10:352:0:0:0,-3.0103,-10 0/0:31.6376:8:8:304:0:0:0,-2.40824,-10 0/0:46.6891:13:13:480:0:0:0,-3.91339,-10 0/0:70.7715:21:21:787:0:0:0,-6.32163,-10 0/0:10.5655:1:1:38:0:0:0,-0.30103,-3.8 0/0:31.6376:8:8:303:0:0:0,-2.40824,-10 0/1:0.18579:11:0:0:11:399:-10,-3.31133,0 0/0:28.6273:7:7:266:0:0:0,-2.10721,-10 0/0:52.7097:15:15:530:0:0:0,-4.51545,-10 0/0:28.6273:7:7:266:0:0:0,-2.10721,-10 0/0:19.5964:4:4:150:0:0:0,-1.20412,-10 0/0:73.7818:22:22:802:0:0:0,-6.62266,-10 0/1:0.0113819:7:0:0:7:262:-10,-2.10721,0 0/0:37.6582:10:10:368:0:0:0,-3.0103,-10 0/0:52.7097:15:15:520:0:0:0,-4.51545,-10 0/0:37.6582:10:10:362:0:0:0,-3.0103,-10 1/1:7.14314:12:0:0:12:447:-10,-3.61236,0 0/0:79.8024:24:24:902:0:0:0,-7.22472,-10 0/0:46.6891:13:13:473:0:0:0,-3.91339,-10 0/0:34.6479:9:9:333:0:0:0,-2.70927,-10 0/0:82.8127:25:25:936:0:0:0,-7.52575,-10 0/0:52.7097:15:15:530:0:0:0,-4.51545,-10 0/0:31.6376:8:8:269:0:0:0,-2.40824,-10 0/0:64.7509:19:19:703:0:0:0,-5.71957,-10 0/0:22.6067:5:5:185:0:0:0,-1.50515,-10 0/0:85.823:26:26:972:0:0:0,-7.82678,-10 0/0:31.6376:8:8:304:0:0:0,-2.40824,-10 0/0:22.6067:5:5:180:0:0:0,-1.50515,-10 0/0:79.8024:24:24:902:0:0:0,-7.22472,-10 0/0:46.6891:13:13:493:0:0:0,-3.91339,-10 0/0:49.6994:14:14:511:0:0:0,-4.21442,-10 0/0:16.5861:3:3:114:0:0:0,-0.90309,-10 0/0:34.6479:9:9:326:0:0:0,-2.70927,-10 0/0:28.6273:7:7:242:0:0:0,-2.10721,-10 0/0:52.7097:15:15:551:0:0:0,-4.51545,-10 0/0:46.6891:13:13:460:0:0:0,-3.91339,-10 0/0:58.7303:17:17:622:0:0:0,-5.11751,-10 0/0:55.72:16:16:590:0:0:0,-4.81648,-10 0/0:28.6273:7:7:263:0:0:0,-2.10721,-10 0/0:52.7097:15:15:545:0:0:0,-4.51545,-10 0/0:43.6788:12:12:453:0:0:0,-3.61236,-10 0/0:25.617:6:6:218:0:0:0,-1.80618,-10 0/0:64.7509:19:19:665:0:0:0,-5.71957,-10 0/0:28.6273:7:7:262:0:0:0,-2.10721,-10 0/0:43.6788:12:12:449:0:0:0,-3.61236,-10 0/0:70.7715:21:21:777:0:0:0,-6.32163,-10 0/0:46.6891:13:13:471:0:0:0,-3.91339,-10 0/0:46.6891:13:13:486:0:0:0,-3.91339,-10 0/0:70.7715:21:21:754:0:0:0,-6.32163,-10 0/0:31.6376:8:8:295:0:0:0,-2.40824,-10 0/0:34.6479:9:9:337:0:0:0,-2.70927,-10 0/0:22.6067:5:5:190:0:0:0,-1.50515,-10 0/0:19.5964:4:4:152:0:0:0,-1.20412,-10 0/0:37.6582:10:10:380:0:0:0,-3.0103,-10 0/0:64.7509:19:19:709:0:0:0,-5.71957,-10 0/0:43.6788:12:12:454:0:0:0,-3.61236,-10 0/0:55.72:16:16:579:0:0:0,-4.81648,-10 0/0:43.6788:12:12:438:0:0:0,-3.61236,-10 0/0:43.6788:12:12:410:0:0:0,-3.61236,-10 0/0:13.5758:2:2:75:0:0:0,-0.60206,-7.125 1/1:16.174:15:0:0:15:503:-10,-4.51545,0 0/0:22.6067:5:5:183:0:0:0,-1.50515,-10 0/0:19.5964:4:4:152:0:0:0,-1.20412,-10 0/0:58.7303:17:17:604:0:0:0,-5.11751,-10 0/0:34.6479:9:9:326:0:0:0,-2.70927,-10 0/0:19.5964:4:4:148:0:0:0,-1.20412,-10 scaffold_140 870407 . A G 16876.6 . AB=0.514589;ABP=3.70724;AC=47;AF=0.255435;AN=184;AO=587;CIGAR=1X;DP=2278;DPB=2278;DPRA=1.05526;EPP=3.19156;EPPR=3.04244;GTI=1;LEN=1;MEANALT=1;MQM=59.9761;MQMR=59.9917;NS=92;NUMALT=1;ODDS=0.287356;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=21679;QR=62024;RO=1689;RPP=1277.66;RPPR=3670.63;RUN=1;SAF=290;SAP=3.19156;SAR=297;SRF=842;SRP=3.04244;SRR=847;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:37.2657:12:12:418:0:0:0,-3.61236,-10 0/0:73.3893:24:24:898:0:0:0,-7.22472,-10 0/0:99:34:34:1258:0:0:0,-10,-10 0/0:55.3275:18:18:677:0:0:0,-5.41854,-10 0/1:99:23:15:540:8:299:-10,0,-10 1/1:21.4944:13:0:0:13:490:-10,-3.91339,0 1/1:99:40:0:0:40:1472:-10,-10,0 0/1:99:41:21:790:20:733:-10,0,-10 1/1:45.5768:21:0:0:21:795:-10,-6.32163,0 1/1:6.44294:8:0:0:8:296:-10,-2.40824,0 1/1:24.5047:14:0:0:14:505:-10,-4.21442,0 0/0:34.2554:11:11:403:0:0:0,-3.31133,-10 0/0:97.4651:32:32:1191:0:0:0,-9.63296,-10 0/1:99:37:15:568:22:830:-10,0,-10 0/0:99:38:38:1411:0:0:0,-10,-10 1/1:93.7388:37:0:0:37:1361:-10,-10,0 1/1:75.6798:31:0:0:31:1162:-10,-9.33193,0 1/1:12.4635:10:0:0:10:380:-10,-3.0103,0 0/1:99:15:8:282:7:256:-10,0,-10 0/0:94.4609:31:31:1169:0:0:0,-9.33193,-10 0/0:64.3584:21:21:741:0:0:0,-6.32163,-10 0/0:99:37:36:1357:0:0:0,-10,-10 0/0:43.2863:14:14:511:0:0:0,-4.21442,-10 0/0:99:34:34:1235:0:0:0,-10,-10 0/0:99:34:34:1243:0:0:0,-10,-10 0/0:85.4301:28:28:1034:0:0:0,-8.42884,-10 1/1:87.7209:35:0:0:35:1316:-10,-10,0 0/0:49.3069:16:16:566:0:0:0,-4.81648,-10 0/0:91.4508:30:30:1122:0:0:0,-9.0309,-10 0/0:99:38:38:1426:0:0:0,-10,-10 0/0:40.276:13:13:489:0:0:0,-3.91339,-10 1/1:33.5356:17:0:0:17:638:-10,-5.11751,0 0/0:76.3996:25:25:948:0:0:0,-7.52575,-10 0/0:49.3069:16:16:555:0:0:0,-4.81648,-10 0/0:79.4098:26:26:953:0:0:0,-7.82678,-10 0/0:28.2348:9:9:331:0:0:0,-2.70927,-10 0/0:52.3172:17:17:577:0:0:0,-5.11751,-10 0/0:99:37:37:1355:0:0:0,-10,-10 0/0:58.3378:19:19:710:0:0:0,-5.71957,-10 0/0:55.3275:18:18:681:0:0:0,-5.41854,-10 0/1:99:42:19:712:23:852:-10,0,-10 0/0:61.3481:20:20:704:0:0:0,-6.0206,-10 0/0:70.379:23:23:835:0:0:0,-6.92369,-10 0/1:99:45:26:939:19:709:-10,0,-10 0/0:79.4098:26:26:967:0:0:0,-7.82678,-10 0/0:64.3584:21:21:785:0:0:0,-6.32163,-10 0/0:99:39:39:1423:0:0:0,-10,-10 0/0:94.4609:31:31:1112:0:0:0,-9.33193,-10 0/0:55.3275:18:18:683:0:0:0,-5.41854,-10 0/0:99:48:48:1774:0:0:0,-10,-10 0/0:58.3378:19:19:717:0:0:0,-5.71957,-10 0/0:99:38:38:1296:0:0:0,-10,-10 1/1:48.5871:22:0:0:22:777:-10,-6.62266,0 0/0:31.2451:10:10:373:0:0:0,-3.0103,-10 0/0:99:49:49:1755:0:0:0,-10,-10 0/0:52.3172:17:17:636:0:0:0,-5.11751,-10 0/0:40.276:13:13:490:0:0:0,-3.91339,-10 0/0:64.3584:21:21:763:0:0:0,-6.32163,-10 1/1:63.6386:27:0:0:27:1004:-10,-8.12781,0 0/0:73.3893:24:24:859:0:0:0,-7.22472,-10 1/1:99:48:0:0:48:1746:-10,-10,0 0/0:70.379:23:23:845:0:0:0,-6.92369,-10 0/1:99:41:19:717:22:799:-10,0,-10 0/1:99:24:8:303:16:557:-10,0,-10 1/1:6.44294:8:0:0:8:300:-10,-2.40824,0 1/1:72.6695:30:0:0:30:1115:-10,-9.0309,0 0/1:99:27:12:456:15:549:-10,0,-10 1/1:12.4635:10:0:0:10:356:-10,-3.0103,0 0/0:88.4407:29:29:1067:0:0:0,-8.72987,-10 0/0:28.2348:9:9:330:0:0:0,-2.70927,-10 0/0:25.2245:8:8:298:0:0:0,-2.40824,-10 0/0:97.4651:32:32:1190:0:0:0,-9.63296,-10 0/0:99:34:33:1156:0:0:0,-9.93399,-10 0/0:37.2657:12:12:446:0:0:0,-3.61236,-10 0/0:99:40:40:1482:0:0:0,-10,-10 0/0:43.2863:14:14:519:0:0:0,-4.21442,-10 0/0:25.2245:8:8:278:0:0:0,-2.40824,-10 1/1:48.5871:22:0:0:22:822:-10,-6.62266,0 0/0:28.2348:9:9:340:0:0:0,-2.70927,-10 0/0:46.2966:15:15:551:0:0:0,-4.51545,-10 0/0:99:48:48:1757:0:0:0,-10,-10 0/0:73.3893:24:24:874:0:0:0,-7.22472,-10 0/1:99:32:19:712:13:484:-10,0,-10 0/1:99:28:14:520:14:517:-10,0,-10 0/0:79.4098:26:26:932:0:0:0,-7.82678,-10 0/1:0.49002:7:0:0:7:266:-10,-2.10721,0 0/0:73.3893:24:24:889:0:0:0,-7.22472,-10 0/0:34.2554:11:11:415:0:0:0,-3.31133,-10 0/1:99:15:7:262:8:293:-10,0,-10 0/0:99:42:42:1579:0:0:0,-10,-10 0/0:79.4098:26:26:954:0:0:0,-7.82678,-10 0/0:76.3996:25:25:890:0:0:0,-7.52575,-10 scaffold_140 870455 . A G 2220.71 . AB=0.826087;ABP=45.4956;AC=5;AF=0.0271739;AN=184;AO=87;CIGAR=1X;DP=2276;DPB=2276;DPRA=0.900555;EPP=6.03039;EPPR=4.93168;GTI=2;LEN=1;MEANALT=1;MQM=59.9885;MQMR=59.9945;NS=92;NUMALT=1;ODDS=0.803144;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3120;QR=79879;RO=2188;RPP=191.928;RPPR=4754.19;RUN=1;SAF=49;SAP=6.03039;SAR=38;SRF=1072;SRP=4.93168;SRR=1116;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:39.7745:12:12:398:0:0:0,-3.61236,-10 0/0:75.8981:24:24:888:0:0:0,-7.22472,-10 0/0:99:34:34:1242:0:0:0,-10,-10 0/0:12.02:18:17:641:1:38:0,-0.363267,-10 0/0:72.8878:23:23:801:0:0:0,-6.92369,-10 0/1:1.42702:13:0:0:13:489:-10,-3.91339,0 0/0:99:40:40:1470:0:0:0,-10,-10 0/0:99:41:41:1513:0:0:0,-10,-10 0/0:66.8672:21:21:762:0:0:0,-6.32163,-10 0/0:27.7333:8:8:302:0:0:0,-2.40824,-10 0/0:42.7848:13:13:489:0:0:0,-3.91339,-10 0/0:36.7642:11:11:393:0:0:0,-3.31133,-10 0/0:99:33:33:1157:0:0:0,-9.93399,-10 0/0:99:37:37:1355:0:0:0,-10,-10 0/0:99:37:37:1380:0:0:0,-10,-10 0/0:99:37:37:1343:0:0:0,-10,-10 0/0:96.9678:31:31:1157:0:0:0,-9.33193,-10 0/0:33.7539:10:10:374:0:0:0,-3.0103,-10 0/0:48.8054:15:15:566:0:0:0,-4.51545,-10 0/0:96.9678:31:31:1095:0:0:0,-9.33193,-10 0/0:66.8672:21:21:786:0:0:0,-6.32163,-10 0/0:99:36:36:1322:0:0:0,-10,-10 0/0:45.7951:14:14:493:0:0:0,-4.21442,-10 0/0:99:34:34:1239:0:0:0,-10,-10 0/0:99:34:34:1214:0:0:0,-10,-10 0/0:87.939:28:28:1016:0:0:0,-8.42884,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:51.8157:16:16:586:0:0:0,-4.81648,-10 0/0:96.9678:31:31:1150:0:0:0,-9.33193,-10 0/0:99:38:38:1373:0:0:0,-10,-10 0/0:42.7848:13:13:487:0:0:0,-3.91339,-10 0/0:51.8157:16:16:606:0:0:0,-4.81648,-10 0/0:78.9084:25:25:937:0:0:0,-7.52575,-10 0/0:54.826:17:17:601:0:0:0,-5.11751,-10 0/0:81.9186:26:26:970:0:0:0,-7.82678,-10 0/0:30.7436:9:9:333:0:0:0,-2.70927,-10 0/0:57.8363:18:18:609:0:0:0,-5.41854,-10 0/0:99:37:37:1320:0:0:0,-10,-10 0/0:60.8466:19:19:695:0:0:0,-5.71957,-10 0/0:57.8363:18:18:680:0:0:0,-5.41854,-10 0/0:99:41:41:1475:0:0:0,-10,-10 0/0:60.8466:19:19:671:0:0:0,-5.71957,-10 0/0:72.8878:23:23:824:0:0:0,-6.92369,-10 0/0:99:45:45:1640:0:0:0,-10,-10 0/0:81.9186:26:26:958:0:0:0,-7.82678,-10 0/0:69.8775:22:22:822:0:0:0,-6.62266,-10 0/0:99:39:39:1435:0:0:0,-10,-10 0/0:93.9587:30:30:1089:0:0:0,-9.0309,-10 0/0:60.8466:19:19:712:0:0:0,-5.71957,-10 0/0:99:47:46:1645:0:0:0,-10,-10 0/0:57.8363:18:18:678:0:0:0,-5.41854,-10 0/0:99:39:39:1361:0:0:0,-10,-10 0/0:69.8775:22:22:790:0:0:0,-6.62266,-10 0/0:33.7539:10:10:349:0:0:0,-3.0103,-10 0/0:99:49:49:1782:0:0:0,-10,-10 0/0:54.826:17:17:610:0:0:0,-5.11751,-10 0/0:42.7848:13:13:478:0:0:0,-3.91339,-10 0/0:66.8672:21:21:746:0:0:0,-6.32163,-10 0/0:84.9288:27:27:1010:0:0:0,-8.12781,-10 0/0:72.8878:23:23:854:0:0:0,-6.92369,-10 1/1:99:48:0:0:48:1676:-10,-10,0 0/0:72.8878:23:23:855:0:0:0,-6.92369,-10 0/0:99:41:41:1539:0:0:0,-10,-10 0/1:99:24:8:304:16:582:-10,0,-10 0/0:27.7333:8:8:302:0:0:0,-2.40824,-10 0/0:93.9587:30:30:1096:0:0:0,-9.0309,-10 0/0:84.9288:27:27:962:0:0:0,-8.12781,-10 0/1:0.0766902:9:0:0:9:335:-10,-2.70927,0 0/0:87.939:28:28:968:0:0:0,-8.42884,-10 0/0:30.7436:9:9:320:0:0:0,-2.70927,-10 0/0:27.7333:8:8:301:0:0:0,-2.40824,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:99:35:35:1241:0:0:0,-10,-10 0/0:39.7745:12:12:455:0:0:0,-3.61236,-10 0/0:99:40:40:1443:0:0:0,-10,-10 0/0:45.7951:14:14:514:0:0:0,-4.21442,-10 0/0:27.7333:8:8:278:0:0:0,-2.40824,-10 0/0:69.8775:22:22:813:0:0:0,-6.62266,-10 0/0:30.7436:9:9:342:0:0:0,-2.70927,-10 0/0:48.8054:15:15:556:0:0:0,-4.51545,-10 0/0:99:48:48:1778:0:0:0,-10,-10 0/0:75.8981:24:24:857:0:0:0,-7.22472,-10 0/0:99:32:32:1201:0:0:0,-9.63296,-10 0/0:87.939:28:28:1015:0:0:0,-8.42884,-10 0/0:81.9186:26:26:975:0:0:0,-7.82678,-10 0/0:24.723:7:7:266:0:0:0,-2.10721,-10 0/0:75.8981:24:24:903:0:0:0,-7.22472,-10 0/0:36.7642:11:11:415:0:0:0,-3.31133,-10 0/0:48.8054:15:15:544:0:0:0,-4.51545,-10 0/0:99:42:42:1573:0:0:0,-10,-10 0/0:84.9288:27:27:984:0:0:0,-8.12781,-10 0/0:81.9186:26:26:945:0:0:0,-7.82678,-10 scaffold_140 950726 . G A 2460.96 . AB=0.573034;ABP=7.13366;AC=9;AF=0.048913;AN=184;AO=97;CIGAR=1X;DP=1727;DPB=1727;DPRA=1.0297;EPP=3.21178;EPPR=3.77859;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9496;NS=92;NUMALT=1;ODDS=0.807759;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3443;QR=58156;RO=1628;RPP=213.643;RPPR=3538.17;RUN=1;SAF=50;SAP=3.21178;SAR=47;SRF=826;SRP=3.77859;SRR=802;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.6248:13:13:444:0:0:0,-3.91339,-10 0/0:76.7175:22:22:787:0:0:0,-6.62266,-10 0/0:94.7774:28:28:945:0:0:0,-8.42884,-10 0/0:40.5939:10:10:322:0:0:0,-3.0103,-10 0/0:43.6042:11:11:399:0:0:0,-3.31133,-10 0/0:52.6351:14:14:517:0:0:0,-4.21442,-10 1/1:61.8188:29:0:0:29:1027:-10,-8.72987,0 0/0:99:30:30:1074:0:0:0,-9.0309,-10 0/0:43.6042:11:11:407:0:0:0,-3.31133,-10 0/0:19.5218:3:3:107:0:0:0,-0.90309,-9.98667 0/0:43.6042:11:11:404:0:0:0,-3.31133,-10 0/0:49.6248:13:13:487:0:0:0,-3.91339,-10 0/0:76.7175:22:22:788:0:0:0,-6.62266,-10 0/0:73.7072:21:21:770:0:0:0,-6.32163,-10 0/0:76.7175:22:22:822:0:0:0,-6.62266,-10 0/0:99:31:31:1098:0:0:0,-9.33193,-10 0/1:99:19:9:314:10:363:-10,0,-10 0/0:22.5321:4:4:151:0:0:0,-1.20412,-10 0/1:99:26:13:488:13:479:-10,0,-10 0/0:99:41:41:1465:0:0:0,-10,-10 0/0:79.7277:23:23:821:0:0:0,-6.92369,-10 0/0:91.7681:27:27:955:0:0:0,-8.12781,-10 0/0:49.6248:13:13:462:0:0:0,-3.91339,-10 0/0:76.7175:22:22:780:0:0:0,-6.62266,-10 0/0:64.6763:20:18:626:0:0:0,-5.41854,-10 0/0:85.7481:25:25:913:0:0:0,-7.52575,-10 0/1:1.53565:13:0:0:13:452:-10,-3.91339,0 0/0:25.5424:5:5:152:0:0:0,-1.50515,-10 0/0:85.7481:25:25:879:0:0:0,-7.52575,-10 0/0:76.7175:22:22:743:0:0:0,-6.62266,-10 0/0:43.6042:11:11:408:0:0:0,-3.31133,-10 0/1:0.00126338:3:0:0:3:91:-8.49333,-0.90309,0 0/0:61.666:17:17:644:0:0:0,-5.11751,-10 0/0:49.6248:13:13:441:0:0:0,-3.91339,-10 0/0:67.6866:19:19:719:0:0:0,-5.71957,-10 0/0:22.5321:4:4:147:0:0:0,-1.20412,-10 0/0:34.5733:8:8:265:0:0:0,-2.40824,-10 0/0:97.7859:29:29:1076:0:0:0,-8.72987,-10 0/0:85.7481:25:25:895:0:0:0,-7.52575,-10 0/0:67.6866:19:19:673:0:0:0,-5.71957,-10 0/1:99:28:16:573:12:429:-10,0,-10 0/0:52.6351:14:14:531:0:0:0,-4.21442,-10 0/0:49.6248:13:13:487:0:0:0,-3.91339,-10 0/0:88.7582:26:26:914:0:0:0,-7.82678,-10 0/0:61.666:17:17:597:0:0:0,-5.11751,-10 0/0:73.7072:21:21:762:0:0:0,-6.32163,-10 0/0:99:34:34:1199:0:0:0,-10,-10 0/0:97.7859:29:29:1071:0:0:0,-8.72987,-10 0/0:76.7175:22:22:745:0:0:0,-6.62266,-10 0/0:99:31:31:1062:0:0:0,-9.33193,-10 0/0:37.5836:9:9:324:0:0:0,-2.70927,-10 0/0:99:35:35:1136:0:0:0,-10,-10 1/1:25.6953:17:0:0:17:602:-10,-5.11751,0 0/0:25.5424:5:5:188:0:0:0,-1.50515,-10 0/0:97.7859:29:29:1058:0:0:0,-8.72987,-10 0/0:70.6969:20:20:725:0:0:0,-6.0206,-10 0/0:73.7072:21:21:777:0:0:0,-6.32163,-10 0/0:46.6145:12:12:432:0:0:0,-3.61236,-10 0/0:58.6557:16:16:561:0:0:0,-4.81648,-10 0/0:46.6145:12:12:420:0:0:0,-3.61236,-10 0/0:88.7582:26:26:940:0:0:0,-7.82678,-10 0/0:67.6866:19:19:681:0:0:0,-5.71957,-10 0/0:70.6969:20:20:720:0:0:0,-6.0206,-10 0/0:58.6557:16:16:576:0:0:0,-4.81648,-10 0/0:46.6145:12:12:426:0:0:0,-3.61236,-10 0/0:58.6557:16:16:592:0:0:0,-4.81648,-10 0/0:82.738:24:24:866:0:0:0,-7.22472,-10 0/0:34.5733:8:8:285:0:0:0,-2.40824,-10 0/0:99:30:30:1062:0:0:0,-9.0309,-10 0/0:34.5733:8:8:293:0:0:0,-2.40824,-10 0/0:64.6763:18:18:645:0:0:0,-5.41854,-10 0/0:85.7481:25:25:912:0:0:0,-7.52575,-10 0/0:94.7774:28:28:1025:0:0:0,-8.42884,-10 0/0:70.6969:20:20:744:0:0:0,-6.0206,-10 0/0:73.7072:21:21:699:0:0:0,-6.32163,-10 0/0:58.6557:16:16:574:0:0:0,-4.81648,-10 0/0:31.563:7:7:244:0:0:0,-2.10721,-10 0/0:34.5733:8:8:283:0:0:0,-2.40824,-10 0/0:34.5733:8:8:301:0:0:0,-2.40824,-10 0/0:52.6351:14:14:455:0:0:0,-4.21442,-10 0/0:99:36:36:1290:0:0:0,-10,-10 0/0:76.7175:22:22:785:0:0:0,-6.62266,-10 0/0:70.6969:20:20:733:0:0:0,-6.0206,-10 0/0:97.7859:29:29:1069:0:0:0,-8.72987,-10 0/0:88.7582:26:26:891:0:0:0,-7.82678,-10 0/0:43.6042:11:11:390:0:0:0,-3.31133,-10 0/0:82.738:24:24:850:0:0:0,-7.22472,-10 0/0:43.6042:11:11:386:0:0:0,-3.31133,-10 0/0:40.5939:10:10:357:0:0:0,-3.0103,-10 0/0:67.6866:19:19:697:0:0:0,-5.71957,-10 0/0:97.7859:29:29:1068:0:0:0,-8.72987,-10 0/0:43.6042:11:11:367:0:0:0,-3.31133,-10 scaffold_140 1135976 . G A 660.259 . AB=0.52;ABP=3.18402;AC=1;AF=0.00543478;AN=184;AO=27;CIGAR=1X;DP=2704;DPB=2704;DPRA=1.81801;EPP=5.02092;EPPR=3.10845;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9843;NS=92;NUMALT=1;ODDS=4.63426;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=941;QR=97265;RO=2677;RPP=61.6401;RPPR=5575.38;RUN=1;SAF=11;SAP=5.02092;SAR=16;SRF=1352;SRP=3.60163;SRR=1325;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:68.3391:19:19:693:0:0:0,-5.71957,-10 0/0:38.2361:9:9:318:0:0:0,-2.70927,-10 0/0:89.4107:26:26:949:0:0:0,-7.82678,-10 0/0:71.3494:20:20:728:0:0:0,-6.0206,-10 0/0:38.2361:9:9:333:0:0:0,-2.70927,-10 0/0:59.3082:16:16:593:0:0:0,-4.81648,-10 0/0:99:65:65:2328:0:0:0,-10,-10 0/0:95.4298:28:28:977:0:0:0,-8.42884,-10 0/0:92.4205:27:27:997:0:0:0,-8.12781,-10 0/0:38.2361:9:9:311:0:0:0,-2.70927,-10 0/0:56.2979:15:15:562:0:0:0,-4.51545,-10 0/0:62.3185:17:17:598:0:0:0,-5.11751,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:99:34:34:1216:0:0:0,-10,-10 0/0:99:41:41:1500:0:0:0,-10,-10 0/0:99:36:36:1282:0:0:0,-10,-10 0/0:98.4381:29:29:1037:0:0:0,-8.72987,-10 0/0:56.2979:15:15:555:0:0:0,-4.51545,-10 0/0:99:41:41:1516:0:0:0,-10,-10 0/0:99:66:66:2314:0:0:0,-10,-10 0/0:68.3391:19:19:691:0:0:0,-5.71957,-10 0/0:99:52:52:1855:0:0:0,-10,-10 0/0:44.2567:11:11:393:0:0:0,-3.31133,-10 0/0:71.3494:20:20:742:0:0:0,-6.0206,-10 0/0:92.4205:27:27:1013:0:0:0,-8.12781,-10 0/0:99:38:38:1385:0:0:0,-10,-10 0/0:99:40:40:1455:0:0:0,-10,-10 0/0:71.3494:20:20:690:0:0:0,-6.0206,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:99:52:52:1907:0:0:0,-10,-10 0/0:47.267:12:12:443:0:0:0,-3.61236,-10 0/0:71.3494:20:20:743:0:0:0,-6.0206,-10 0/0:68.3391:19:19:674:0:0:0,-5.71957,-10 0/0:62.3185:17:17:584:0:0:0,-5.11751,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:35.2258:8:8:290:0:0:0,-2.40824,-10 0/0:56.2979:15:15:539:0:0:0,-4.51545,-10 0/0:99:39:39:1323:0:0:0,-10,-10 0/0:77.37:22:22:796:0:0:0,-6.62266,-10 0/0:80.3803:23:23:794:0:0:0,-6.92369,-10 0/0:99:55:54:1980:1:16:0,-10,-10 0/0:98.4381:29:29:1067:0:0:0,-8.72987,-10 0/0:99:38:38:1427:0:0:0,-10,-10 0/0:99:46:46:1679:0:0:0,-10,-10 0/0:99:39:39:1397:0:0:0,-10,-10 0/0:65.3288:18:18:673:0:0:0,-5.41854,-10 0/0:99:70:70:2530:0:0:0,-10,-10 0/0:99:50:50:1842:0:0:0,-10,-10 0/0:80.3803:23:23:810:0:0:0,-6.92369,-10 0/0:99:58:58:2051:0:0:0,-10,-10 0/0:44.2567:11:11:399:0:0:0,-3.31133,-10 0/0:99:49:49:1758:0:0:0,-10,-10 0/0:77.37:22:22:820:0:0:0,-6.62266,-10 0/0:59.3082:16:16:580:0:0:0,-4.81648,-10 0/0:99:61:61:2276:0:0:0,-10,-10 0/0:71.3494:20:20:750:0:0:0,-6.0206,-10 0/0:99:36:36:1328:0:0:0,-10,-10 0/0:38.2361:9:9:310:0:0:0,-2.70927,-10 0/0:80.3803:23:23:802:0:0:0,-6.92369,-10 0/0:71.3494:20:20:715:0:0:0,-6.0206,-10 0/0:99:46:46:1673:0:0:0,-10,-10 0/0:99:39:39:1410:0:0:0,-10,-10 0/0:99:61:61:2266:0:0:0,-10,-10 0/0:56.2979:15:15:558:0:0:0,-4.51545,-10 0/0:71.3494:20:20:753:0:0:0,-6.0206,-10 0/0:99:47:47:1681:0:0:0,-10,-10 0/0:74.3597:21:21:783:0:0:0,-6.32163,-10 0/0:35.2258:8:8:301:0:0:0,-2.40824,-10 0/0:99:68:68:2402:0:0:0,-10,-10 0/0:56.2979:15:15:544:0:0:0,-4.51545,-10 0/0:92.4205:27:27:1002:0:0:0,-8.12781,-10 0/1:99:50:24:878:26:925:-10,0,-10 0/0:99:37:37:1379:0:0:0,-10,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:99:48:48:1798:0:0:0,-10,-10 0/0:59.3082:16:16:599:0:0:0,-4.81648,-10 0/0:56.2979:15:15:523:0:0:0,-4.51545,-10 0/0:68.3391:19:19:676:0:0:0,-5.71957,-10 0/0:44.2567:11:11:379:0:0:0,-3.31133,-10 0/0:47.267:12:12:448:0:0:0,-3.61236,-10 0/0:99:59:59:2151:0:0:0,-10,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:99:38:38:1415:0:0:0,-10,-10 0/0:86.4007:25:25:917:0:0:0,-7.52575,-10 0/0:99:49:49:1820:0:0:0,-10,-10 0/0:47.267:12:12:434:0:0:0,-3.61236,-10 0/0:95.4298:28:28:1035:0:0:0,-8.42884,-10 0/0:65.3288:18:18:616:0:0:0,-5.41854,-10 0/0:20.1743:3:3:101:0:0:0,-0.90309,-9.42667 0/0:83.3905:24:24:890:0:0:0,-7.22472,-10 0/0:77.37:22:22:819:0:0:0,-6.62266,-10 0/0:68.3391:19:19:685:0:0:0,-5.71957,-10 scaffold_140 1136006 . A G 956.856 . AB=0.514706;ABP=3.13803;AC=2;AF=0.0108696;AN=184;AO=36;CIGAR=1X;DP=2519;DPB=2519;DPRA=1.31606;EPP=3.9754;EPPR=5.56972;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9919;NS=92;NUMALT=1;ODDS=6.0465;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1328;QR=88186;RO=2474;RPP=72.7387;RPPR=4251.16;RUN=1;SAF=19;SAP=3.25157;SAR=17;SRF=1249;SRP=3.51587;SRR=1225;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:80.4571:20:20:688:0:0:0,-6.0206,-10 0/0:50.3541:10:10:357:0:0:0,-3.0103,-10 0/0:99:42:42:1499:0:0:0,-10,-10 0/0:80.4571:20:20:711:0:0:0,-6.0206,-10 0/0:99:27:27:933:0:0:0,-8.12781,-10 0/0:59.385:13:13:445:0:0:0,-3.91339,-10 0/0:99:58:58:2078:0:0:0,-10,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:74.4365:18:18:612:0:0:0,-5.41854,-10 0/0:26.2717:2:2:71:0:0:0,-0.60206,-6.745 0/0:44.3335:8:8:272:0:0:0,-2.40824,-10 0/0:68.4159:16:16:491:0:0:0,-4.81648,-10 0/0:99:51:51:1756:0:0:0,-10,-10 0/0:99:49:49:1772:0:0:0,-10,-10 0/0:85.3133:39:38:1371:1:38:0,-6.34911,-10 0/0:95.506:25:25:894:0:0:0,-7.52575,-10 0/0:99:29:29:1045:0:0:0,-8.72987,-10 0/0:59.385:13:13:470:0:0:0,-3.91339,-10 0/0:80.4571:20:20:736:0:0:0,-6.0206,-10 0/0:99:63:62:2220:0:0:0,-10,-10 0/0:99:32:32:1098:0:0:0,-9.63296,-10 0/0:99:41:41:1509:0:0:0,-10,-10 0/0:92.497:24:24:834:0:0:0,-7.22472,-10 0/0:99:34:34:1199:0:0:0,-10,-10 0/0:99:29:27:999:0:0:0,-8.12781,-10 0/0:99:31:31:1094:0:0:0,-9.33193,-10 0/0:83.4672:22:21:750:0:0:0,-6.32163,-10 0/0:92.497:24:24:820:0:0:0,-7.22472,-10 0/0:98.5137:26:26:928:0:0:0,-7.82678,-10 0/0:99:42:42:1515:0:0:0,-10,-10 0/0:38.3129:6:6:206:0:0:0,-1.80618,-10 0/0:47.3438:9:9:308:0:0:0,-2.70927,-10 0/0:98.5137:26:26:927:0:0:0,-7.82678,-10 0/0:47.3438:9:9:339:0:0:0,-2.70927,-10 0/0:99:39:39:1363:0:0:0,-10,-10 0/0:74.4365:18:18:657:0:0:0,-5.41854,-10 0/0:59.385:13:13:482:0:0:0,-3.91339,-10 0/0:99:43:42:1412:0:0:0,-10,-10 0/0:99:29:29:1020:0:0:0,-8.72987,-10 0/0:77.4468:19:19:671:0:0:0,-5.71957,-10 0/0:99:34:34:1197:0:0:0,-10,-10 0/0:92.497:24:24:907:0:0:0,-7.22472,-10 0/0:86.4773:22:22:783:0:0:0,-6.62266,-10 0/1:99:43:20:737:23:844:-10,0,-10 0/0:99:33:33:1161:0:0:0,-9.93399,-10 0/0:59.385:13:13:485:0:0:0,-3.91339,-10 0/0:99:66:66:2317:0:0:0,-10,-10 0/0:99:30:30:1065:0:0:0,-9.0309,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:99:49:48:1722:0:0:0,-10,-10 0/0:50.3541:10:10:338:0:0:0,-3.0103,-10 0/0:99:46:46:1676:0:0:0,-10,-10 0/0:99:34:34:1226:0:0:0,-10,-10 0/0:41.3232:7:7:261:0:0:0,-2.10721,-10 0/0:99:54:54:1857:0:0:0,-10,-10 0/0:80.4571:21:20:743:0:0:0,-6.0206,-10 0/0:86.4773:22:22:812:0:0:0,-6.62266,-10 0/0:50.3541:10:10:369:0:0:0,-3.0103,-10 0/0:92.497:24:24:853:0:0:0,-7.22472,-10 0/0:65.4056:15:15:530:0:0:0,-4.51545,-10 0/0:99:49:49:1758:0:0:0,-10,-10 0/0:98.5137:26:26:946:0:0:0,-7.82678,-10 0/0:99:51:51:1855:0:0:0,-10,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:59.385:13:13:444:0:0:0,-3.91339,-10 0/0:99:41:41:1510:0:0:0,-10,-10 0/1:99:25:13:461:12:446:-10,0,-10 0/0:62.3953:15:14:526:0:0:0,-4.21442,-10 0/0:99:49:49:1779:0:0:0,-10,-10 0/0:62.3953:14:14:478:0:0:0,-4.21442,-10 0/0:99:33:33:1153:0:0:0,-9.93399,-10 0/0:99:31:31:1091:0:0:0,-9.33193,-10 0/0:99:31:31:1106:0:0:0,-9.33193,-10 0/0:77.4468:19:19:657:0:0:0,-5.71957,-10 0/0:99:51:51:1731:0:0:0,-10,-10 0/0:65.4056:15:15:556:0:0:0,-4.51545,-10 0/0:86.4773:23:22:788:0:0:0,-6.62266,-10 0/0:71.4262:17:17:609:0:0:0,-5.11751,-10 0/0:41.3232:7:7:258:0:0:0,-2.10721,-10 0/0:53.3644:11:11:343:0:0:0,-3.31133,-10 0/0:99:45:45:1600:0:0:0,-10,-10 0/0:99:41:41:1427:0:0:0,-10,-10 0/0:86.4773:22:22:783:0:0:0,-6.62266,-10 0/0:99:34:34:1258:0:0:0,-10,-10 0/0:98.5137:26:26:963:0:0:0,-7.82678,-10 0/0:56.3747:12:12:422:0:0:0,-3.61236,-10 0/0:89.4873:23:23:811:0:0:0,-6.92369,-10 0/0:98.5137:26:26:928:0:0:0,-7.82678,-10 0/0:59.385:13:13:478:0:0:0,-3.91339,-10 0/0:68.4159:16:16:593:0:0:0,-4.81648,-10 0/0:99:30:30:1073:0:0:0,-9.0309,-10 0/0:95.506:25:25:931:0:0:0,-7.52575,-10 scaffold_140 1326534 . C G 23082.9 . AB=0.524631;ABP=5.14968;AC=55;AF=0.295699;AN=186;AO=803;CIGAR=1X;DP=2608;DPB=2608;DPRA=1.14574;EPP=13.7433;EPPR=7.94612;GTI=3;LEN=1;MEANALT=1.09375;MQM=59.8879;MQMR=59.9828;NS=93;NUMALT=1;ODDS=0.720142;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=29252;QR=65697;RO=1802;RPP=1694.98;RPPR=3786.8;RUN=1;SAF=433;SAP=13.7433;SAR=370;SRF=870;SRP=7.64245;SRR=932;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.5724:22:22:817:0:0:0,-6.62266,-10 0/0:66.593:24:24:874:0:0:0,-7.22472,-10 0/0:87.6649:31:31:1131:0:0:0,-9.33193,-10 0/0:57.5621:21:21:787:0:0:0,-6.32163,-10 0/0:66.593:24:24:902:0:0:0,-7.22472,-10 0/0:45.5209:17:17:617:0:0:0,-5.11751,-10 0/0:99:50:50:1810:0:0:0,-10,-10 0/0:99:35:35:1278:0:0:0,-10,-10 0/0:45.5209:17:17:635:0:0:0,-5.11751,-10 0/1:0.898305:3:3:113:0:0:0,-0.90309,-10 0/0:18.4282:8:8:275:0:0:0,-2.40824,-10 0/0:15.4179:7:7:257:0:0:0,-2.10721,-10 0/0:99:39:39:1409:0:0:0,-10,-10 0/0:99:59:59:2202:0:0:0,-10,-10 0/0:99:39:39:1373:0:0:0,-10,-10 0/0:99:49:49:1757:0:0:0,-10,-10 0/0:99:40:40:1475:0:0:0,-10,-10 0/0:33.4797:13:13:471:0:0:0,-3.91339,-10 0/0:99:39:39:1399:0:0:0,-10,-10 1/1:99:55:0:0:55:1993:-10,-10,0 0/1:99:24:9:341:15:515:-10,0,-10 0/1:99:45:27:969:18:642:-10,0,-10 1/1:24.2202:13:0:0:13:494:-10,-3.91339,0 1/1:75.3953:30:0:0:30:1064:-10,-9.0309,0 0/0:66.593:24:24:882:0:0:0,-7.22472,-10 1/1:78.4056:31:0:0:31:1140:-10,-9.33193,0 0/0:87.6649:31:31:1162:0:0:0,-9.33193,-10 0/0:60.5724:22:22:822:0:0:0,-6.62266,-10 1/1:57.3335:24:0:0:24:822:-10,-7.22472,0 0/1:99:48:21:764:27:1006:-10,0,-10 1/1:12.179:9:0:0:9:326:-10,-2.70927,0 0/0:21.4385:9:9:329:0:0:0,-2.70927,-10 1/1:75.3953:30:0:0:30:1107:-10,-9.0309,0 1/1:9.16874:8:0:0:8:256:-10,-2.40824,0 0/0:84.6547:30:30:1121:0:0:0,-9.0309,-10 1/1:30.2408:15:0:0:15:563:-10,-4.51545,0 0/1:0.0889321:3:0:0:3:99:-9.24,-0.90309,0 0/1:99:47:27:976:20:728:-10,0,-10 0/0:60.5724:22:22:799:0:0:0,-6.62266,-10 0/1:99:25:11:414:14:530:-10,0,-10 0/1:99:48:19:692:29:1068:-10,0,-10 0/0:72.6136:26:26:943:0:0:0,-7.82678,-10 0/0:90.6749:32:32:1162:0:0:0,-9.63296,-10 0/1:99:38:22:814:15:568:-10,0,-10 1/1:66.3644:27:0:0:27:967:-10,-8.12781,0 1/1:54.3232:23:0:0:23:857:-10,-6.92369,0 1/1:99:53:0:0:52:1889:-10,-10,0 1/1:93.4561:36:0:0:36:1314:-10,-10,0 1/1:12.179:9:0:0:9:310:-10,-2.70927,0 0/1:99:39:15:488:24:901:-10,0,-10 1/1:60.3438:25:0:0:25:911:-10,-7.52575,0 0/1:99:52:26:928:26:983:-10,0,-10 0/0:51.5415:19:19:668:0:0:0,-5.71957,-10 1/1:33.2511:16:0:0:16:591:-10,-4.81648,0 1/1:99:83:0:0:83:3016:-10,-10,0 1/1:57.3335:24:0:0:24:892:-10,-7.22472,0 1/1:96.4609:37:0:0:37:1362:-10,-10,0 0/0:36.49:14:14:485:0:0:0,-4.21442,-10 0/0:72.6136:26:26:967:0:0:0,-7.82678,-10 0/0:60.5724:22:22:780:0:0:0,-6.62266,-10 0/0:99:50:50:1870:0:0:0,-10,-10 0/0:96.6938:34:34:1254:0:0:0,-10,-10 0/0:99:36:36:1292:0:0:0,-10,-10 0/0:81.6445:29:29:1063:0:0:0,-8.72987,-10 0/0:42.5106:16:16:574:0:0:0,-4.81648,-10 0/0:90.6749:32:32:1166:0:0:0,-9.63296,-10 0/0:84.6547:30:30:1107:0:0:0,-9.0309,-10 0/0:33.4797:13:13:473:0:0:0,-3.91339,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:27.4591:11:11:412:0:0:0,-3.31133,-10 0/0:90.6749:32:32:1174:0:0:0,-9.63296,-10 0/0:99:44:44:1630:0:0:0,-10,-10 0/0:69.6033:25:25:923:0:0:0,-7.52575,-10 0/0:66.593:24:24:880:0:0:0,-7.22472,-10 0/0:99:38:38:1362:0:0:0,-10,-10 0/0:45.5209:17:17:633:0:0:0,-5.11751,-10 0/0:60.5724:22:22:808:0:0:0,-6.62266,-10 0/0:78.6342:28:28:1026:0:0:0,-8.42884,-10 0/0:12.4076:6:6:223:0:0:0,-1.80618,-10 0/0:54.5518:20:20:729:0:0:0,-6.0206,-10 0/0:99:50:50:1796:0:0:0,-10,-10 0/0:99:45:45:1572:0:0:0,-10,-10 0/1:99:37:15:560:22:777:-10,0,-10 0/0:81.6445:29:29:1025:0:0:0,-8.72987,-10 0/0:75.6239:27:27:989:0:0:0,-8.12781,-10 0/0:27.4591:11:11:412:0:0:0,-3.31133,-10 1/1:63.3541:26:0:0:26:934:-10,-7.82678,0 1/1:36.2614:18:0:0:17:627:-10,-5.11751,0 0/0:27.4591:11:11:404:0:0:0,-3.31133,-10 0/0:99:36:36:1331:0:0:0,-10,-10 0/0:84.6547:30:30:1086:0:0:0,-9.0309,-10 0/0:36.49:14:14:504:0:0:0,-4.21442,-10 scaffold_140 1580684 . T C 891.869 . AB=0.642857;ABP=12.937;AC=3;AF=0.0163043;AN=184;AO=39;CIGAR=1X;DP=1760;DPB=1760;DPRA=1.13366;EPP=3.51141;EPPR=5.92245;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9523;NS=92;NUMALT=1;ODDS=2.39435;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1395;QR=62695;RO=1718;RPP=87.6977;RPPR=3511.18;RUN=1;SAF=18;SAP=3.51141;SAR=21;SRF=857;SRP=3.03052;SRR=861;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.0886967:15:0:0:15:560:-10,-4.51545,0 0/0:44.8778:9:9:317:0:0:0,-2.70927,-10 0/0:93.0425:25:25:934:0:0:0,-7.52575,-10 0/0:65.9499:16:16:577:0:0:0,-4.81648,-10 0/0:56.919:13:13:492:0:0:0,-3.91339,-10 0/0:71.9705:18:18:645:0:0:0,-5.41854,-10 0/0:99:35:34:1231:0:0:0,-10,-10 0/0:99:37:37:1270:0:0:0,-10,-10 0/0:74.9808:19:19:704:0:0:0,-5.71957,-10 0/0:35.8469:6:6:223:0:0:0,-1.80618,-10 0/0:65.9499:16:16:584:0:0:0,-4.81648,-10 0/0:32.8366:5:5:188:0:0:0,-1.50515,-10 0/0:84.0117:22:22:808:0:0:0,-6.62266,-10 0/0:99:39:39:1425:0:0:0,-10,-10 0/0:68.9602:17:17:638:0:0:0,-5.11751,-10 0/0:87.022:23:23:851:0:0:0,-6.92369,-10 0/0:81.0014:21:21:794:0:0:0,-6.32163,-10 0/0:47.8881:10:10:348:0:0:0,-3.0103,-10 0/0:65.9499:16:16:567:0:0:0,-4.81648,-10 0/0:99:28:28:1016:0:0:0,-8.42884,-10 0/0:81.0014:21:21:779:0:0:0,-6.32163,-10 0/0:93.0425:25:25:921:0:0:0,-7.52575,-10 0/0:29.8263:4:4:137:0:0:0,-1.20412,-10 0/0:93.0425:25:25:900:0:0:0,-7.52575,-10 0/0:68.9602:17:17:618:0:0:0,-5.11751,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:84.0117:22:22:791:0:0:0,-6.62266,-10 0/0:62.9396:15:15:559:0:0:0,-4.51545,-10 0/0:68.9602:17:17:637:0:0:0,-5.11751,-10 0/0:99:29:29:1006:0:0:0,-8.72987,-10 0/0:29.8263:4:4:148:0:0:0,-1.20412,-10 0/0:32.8366:5:5:185:0:0:0,-1.50515,-10 0/0:84.0117:22:22:773:0:0:0,-6.62266,-10 0/0:47.8881:10:10:369:0:0:0,-3.0103,-10 0/0:59.9293:14:14:530:0:0:0,-4.21442,-10 0/0:32.8366:5:5:189:0:0:0,-1.50515,-10 0/0:53.9087:12:12:441:0:0:0,-3.61236,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:77.991:20:20:706:0:0:0,-6.0206,-10 0/0:59.9293:14:14:502:0:0:0,-4.21442,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:90.0313:24:24:878:0:0:0,-7.22472,-10 0/0:59.9293:14:14:495:0:0:0,-4.21442,-10 0/0:99:32:32:1140:0:0:0,-9.63296,-10 0/0:84.0117:22:22:815:0:0:0,-6.62266,-10 0/0:44.8778:9:9:324:0:0:0,-2.70927,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:99:27:27:962:0:0:0,-8.12781,-10 0/0:68.9602:17:17:642:0:0:0,-5.11751,-10 0/0:99:29:28:997:0:0:0,-8.42884,-10 0/0:0.369216:13:12:451:1:38:-1.00055,0,-10 0/0:99:36:36:1332:0:0:0,-10,-10 0/0:59.9293:14:14:523:0:0:0,-4.21442,-10 0/0:38.8572:7:7:255:0:0:0,-2.10721,-10 0/0:99:42:41:1495:0:0:0,-10,-10 0/0:50.8984:11:11:385:0:0:0,-3.31133,-10 0/0:99:27:27:959:0:0:0,-8.12781,-10 0/0:47.8881:10:10:366:0:0:0,-3.0103,-10 0/0:53.9087:12:12:456:0:0:0,-3.61236,-10 0/0:41.8675:8:8:298:0:0:0,-2.40824,-10 0/0:99:30:30:1128:0:0:0,-9.0309,-10 0/0:59.9293:14:14:514:0:0:0,-4.21442,-10 0/0:99:46:46:1602:0:0:0,-10,-10 0/0:71.0119:26:25:859:1:14:0,-5.01181,-10 0/0:56.919:13:13:439:0:0:0,-3.91339,-10 0/0:81.0014:21:21:747:0:0:0,-6.32163,-10 0/0:71.9705:18:18:658:0:0:0,-5.41854,-10 0/0:62.9396:15:15:542:0:0:0,-4.51545,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:59.9293:14:14:497:0:0:0,-4.21442,-10 0/0:59.9293:14:14:516:0:0:0,-4.21442,-10 0/0:81.0014:21:21:780:0:0:0,-6.32163,-10 0/0:93.0425:25:25:935:0:0:0,-7.52575,-10 0/0:38.8572:7:7:266:0:0:0,-2.10721,-10 0/0:99:28:28:1037:0:0:0,-8.42884,-10 0/0:56.919:13:13:486:0:0:0,-3.91339,-10 0/0:68.9602:17:17:636:0:0:0,-5.11751,-10 0/0:59.9293:14:14:528:0:0:0,-4.21442,-10 0/0:35.8469:6:6:202:0:0:0,-1.80618,-10 0/0:62.9396:15:15:553:0:0:0,-4.51545,-10 0/0:69.9293:34:33:1181:1:38:0,-4.90354,-10 0/1:99:25:11:407:14:481:-10,0,-10 0/0:99:30:30:1137:0:0:0,-9.0309,-10 0/1:99:16:9:339:7:264:-10,0,-10 0/0:53.9087:12:12:448:0:0:0,-3.61236,-10 0/0:35.8469:6:6:223:0:0:0,-1.80618,-10 0/0:68.9602:17:17:640:0:0:0,-5.11751,-10 0/0:74.9808:19:19:691:0:0:0,-5.71957,-10 0/0:44.8778:9:9:342:0:0:0,-2.70927,-10 0/0:71.9705:18:18:658:0:0:0,-5.41854,-10 0/0:65.9499:16:16:591:0:0:0,-4.81648,-10 0/0:65.9499:16:16:599:0:0:0,-4.81648,-10 scaffold_140 2141123 . G A 1026.03 . AB=0.621212;ABP=11.433;AC=5;AF=0.0271739;AN=184;AO=43;CIGAR=1X;DP=1672;DPB=1672;DPRA=0.913643;EPP=4.27278;EPPR=7.65621;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9355;NS=92;NUMALT=1;ODDS=6.46743;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1601;QR=59943;RO=1627;RPP=96.3836;RPPR=3271.86;RUN=1;SAF=24;SAP=4.27278;SAR=19;SRF=809;SRP=3.11841;SRR=818;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.039:13:13:480:0:0:0,-3.91339,-10 0/0:52.9979:10:9:341:0:0:0,-2.70927,-10 0/0:99:27:27:1025:0:0:0,-8.12781,-10 0/0:65.039:13:13:491:0:0:0,-3.91339,-10 0/1:94.4742:13:9:342:4:152:-10,0,-10 0/0:56.0082:10:10:379:0:0:0,-3.0103,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:77.0803:17:17:610:0:0:0,-5.11751,-10 0/0:92.1306:22:22:822:0:0:0,-6.62266,-10 0/0:46.9773:7:7:265:0:0:0,-2.10721,-10 0/0:43.967:6:6:228:0:0:0,-1.80618,-10 0/0:31.9258:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:38:38:1369:0:0:0,-10,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:89.1209:21:21:784:0:0:0,-6.32163,-10 0/0:80.0906:18:18:659:0:0:0,-5.41854,-10 0/0:74.07:16:16:598:0:0:0,-4.81648,-10 0/0:80.0906:18:18:637:0:0:0,-5.41854,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/1:99:11:4:130:7:266:-10,0,-10 0/0:99:25:25:914:0:0:0,-7.52575,-10 0/0:46.9773:7:7:244:0:0:0,-2.10721,-10 0/0:92.1306:22:22:803:0:0:0,-6.62266,-10 0/0:71.0596:15:15:563:0:0:0,-4.51545,-10 0/0:77.0803:17:17:596:0:0:0,-5.11751,-10 0/0:89.1209:21:21:789:0:0:0,-6.32163,-10 0/0:52.9979:9:9:342:0:0:0,-2.70927,-10 0/0:99:26:26:969:0:0:0,-7.82678,-10 0/0:99:32:32:1137:0:0:0,-9.63296,-10 0/0:43.967:6:6:226:0:0:0,-1.80618,-10 0/0:56.0082:10:10:377:0:0:0,-3.0103,-10 0/0:68.0493:14:14:528:0:0:0,-4.21442,-10 0/0:46.9773:7:7:264:0:0:0,-2.10721,-10 0/0:59.0184:11:11:418:0:0:0,-3.31133,-10 0/0:49.9876:8:8:291:0:0:0,-2.40824,-10 0/1:0.00168158:10:0:0:10:372:-10,-3.0103,0 0/0:99:26:26:974:0:0:0,-7.82678,-10 0/0:74.07:16:16:564:0:0:0,-4.81648,-10 0/0:80.0906:18:18:660:0:0:0,-5.41854,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:92.1306:22:22:829:0:0:0,-6.62266,-10 0/0:77.0803:17:17:643:0:0:0,-5.11751,-10 0/0:80.0906:18:18:656:0:0:0,-5.41854,-10 0/0:71.0596:15:15:535:0:0:0,-4.51545,-10 0/0:62.0288:12:12:454:0:0:0,-3.61236,-10 0/0:78.3709:35:34:1236:1:38:0,-5.19198,-10 0/0:99:27:27:983:0:0:0,-8.12781,-10 0/0:56.0082:10:10:379:0:0:0,-3.0103,-10 0/0:99:36:36:1335:0:0:0,-10,-10 0/0:65.039:13:13:491:0:0:0,-3.91339,-10 0/0:99:40:40:1488:0:0:0,-10,-10 0/0:68.0493:15:14:508:0:0:0,-4.21442,-10 0/0:43.967:6:6:226:0:0:0,-1.80618,-10 0/0:99:43:43:1580:0:0:0,-10,-10 0/0:74.07:16:16:542:0:0:0,-4.81648,-10 0/0:86.1109:20:20:752:0:0:0,-6.0206,-10 0/0:46.9773:7:7:261:0:0:0,-2.10721,-10 0/0:83.1007:19:19:690:0:0:0,-5.71957,-10 0/0:59.0184:11:11:382:0:0:0,-3.31133,-10 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:80.0906:18:18:677:0:0:0,-5.41854,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:68.0493:14:14:527:0:0:0,-4.21442,-10 0/0:77.0803:17:17:642:0:0:0,-5.11751,-10 0/0:99:37:37:1357:0:0:0,-10,-10 0/0:83.1007:19:19:706:0:0:0,-5.71957,-10 0/0:74.07:16:16:599:0:0:0,-4.81648,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:40.9567:5:5:181:0:0:0,-1.50515,-10 0/0:46.9773:7:7:239:0:0:0,-2.10721,-10 0/0:95.1397:23:23:860:0:0:0,-6.92369,-10 0/0:77.0803:17:17:645:0:0:0,-5.11751,-10 0/0:56.0082:10:10:357:0:0:0,-3.0103,-10 0/0:99:30:30:1129:0:0:0,-9.0309,-10 0/0:68.0493:14:14:522:0:0:0,-4.21442,-10 0/0:65.039:13:13:490:0:0:0,-3.91339,-10 0/0:49.9876:8:8:295:0:0:0,-2.40824,-10 0/0:40.9567:5:5:189:0:0:0,-1.50515,-10 0/1:0.00673025:12:0:0:12:455:-10,-3.61236,0 0/0:99:33:33:1242:0:0:0,-9.93399,-10 0/1:99:20:12:445:8:302:-10,0,-10 0/0:99:30:30:1075:0:0:0,-9.0309,-10 0/0:46.5747:16:15:566:1:16:0,-2.01236,-10 0/0:80.0906:18:18:654:0:0:0,-5.41854,-10 0/0:62.0288:12:12:433:0:0:0,-3.61236,-10 0/0:86.1109:20:20:728:0:0:0,-6.0206,-10 0/0:49.9876:8:8:282:0:0:0,-2.40824,-10 0/0:68.0493:14:14:515:0:0:0,-4.21442,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 0/0:83.1007:19:19:667:0:0:0,-5.71957,-10 0/0:77.0803:17:17:645:0:0:0,-5.11751,-10 scaffold_140 2196108 . C A 777.95 . AB=0.632353;ABP=13.3567;AC=4;AF=0.0217391;AN=184;AO=45;CIGAR=1X1M1X;DP=2020;DPB=2020.33;DPRA=0.868191;EPP=100.727;EPPR=3.16951;GTI=2;LEN=1;MEANALT=1;MQM=59.8;MQMR=59.4725;NS=92;NUMALT=1;ODDS=6.92204;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=1;QA=1584;QR=70372;RO=1964;RPP=100.727;RPPR=4250.43;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=976;SRP=3.16951;SRR=988;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:67.7122:14:14:491:0:0:0,-4.21442,-10 0|0:64.7019:13:13:460:0:0:0,-3.91339,-10 0|0:99:28:28:964:0:0:0,-8.42884,-10 0|0:55.671:10:10:342:0:0:0,-3.0103,-10 0|0:91.7943:22:22:806:0:0:0,-6.62266,-10 0|0:49.6504:8:8:294:0:0:0,-2.40824,-10 0|0:99:49:49:1742:0:0:0,-10,-10 0|0:97.8139:24:24:890:0:0:0,-7.22472,-10 0|0:76.7431:17:17:624:0:0:0,-5.11751,-10 0|0:43.6298:6:6:193:0:0:0,-1.80618,-10 0|0:52.6607:9:9:332:0:0:0,-2.70927,-10 0|0:40.6195:5:5:182:0:0:0,-1.50515,-10 0|0:99:27:26:962:0:0:0,-7.82678,-10 0|0:99:41:41:1487:0:0:0,-10,-10 0|0:99:30:30:1065:0:0:0,-9.0309,-10 0|0:99:32:32:1175:0:0:0,-9.63296,-10 0|0:99:28:28:1034:0:0:0,-8.42884,-10 0|0:58.6813:11:11:357:0:0:0,-3.31133,-10 0|0:99:28:28:1010:0:0:0,-8.42884,-10 0|0:99:39:39:1389:0:0:0,-10,-10 0|0:85.7739:20:20:695:0:0:0,-6.0206,-10 0|0:99:34:34:1223:0:0:0,-10,-10 0|1:0.00107046:10:0:0:10:347:-10,-3.0103,0 0|0:0.00427613:28:26:917:2:74:-1.17865,0,-10 0|0:94.8042:23:23:804:0:0:0,-6.92369,-10 0|1:67.7077:15:1:38:14:502:-10,0,-0.460641 0|0:99:27:27:910:0:0:0,-8.12781,-10 0|0:76.7431:17:17:610:0:0:0,-5.11751,-10 0|0:99:25:25:914:0:0:0,-7.52575,-10 0|0:99:33:33:1186:0:0:0,-9.93399,-10 0|0:43.6298:6:6:227:0:0:0,-1.80618,-10 0|0:61.6916:12:12:436:0:0:0,-3.61236,-10 0|0:70.7225:15:15:567:0:0:0,-4.51545,-10 0|0:79.7534:18:18:663:0:0:0,-5.41854,-10 0|0:79.7534:18:18:658:0:0:0,-5.41854,-10 0|0:52.6607:10:9:310:0:0:0,-2.70927,-10 0|0:64.7019:13:13:447:0:0:0,-3.91339,-10 0|0:99:33:33:1197:0:0:0,-9.93399,-10 0|0:88.7841:21:21:758:0:0:0,-6.32163,-10 0|0:82.7637:19:19:677:0:0:0,-5.71957,-10 0|0:99:47:47:1679:0:0:0,-10,-10 0|0:70.7225:15:15:524:0:0:0,-4.51545,-10 0|0:99:28:27:912:0:0:0,-8.12781,-10 0|0:99:34:34:1249:0:0:0,-10,-10 0|1:99:14:6:221:8:297:-10,0,-10 0|0:73.7328:16:16:576:0:0:0,-4.81648,-10 0|0:99:43:43:1554:0:0:0,-10,-10 0|0:99:27:26:913:0:0:0,-7.82678,-10 0|0:73.7328:16:16:570:0:0:0,-4.81648,-10 0|0:99:34:34:1219:0:0:0,-10,-10 0|0:76.7431:17:17:609:0:0:0,-5.11751,-10 0|1:99:29:18:665:11:364:-10,0,-10 0|0:79.7534:19:18:652:0:0:0,-5.41854,-10 0|0:43.6298:6:6:224:0:0:0,-1.80618,-10 0|0:99:51:51:1833:0:0:0,-10,-10 0|0:70.7225:15:15:506:0:0:0,-4.51545,-10 0|0:99:28:28:950:0:0:0,-8.42884,-10 0|0:55.671:10:10:333:0:0:0,-3.0103,-10 0|0:99:26:26:935:0:0:0,-7.82678,-10 0|0:76.7431:17:17:637:0:0:0,-5.11751,-10 0|0:99:31:31:1095:0:0:0,-9.33193,-10 0|0:85.7739:20:20:727:0:0:0,-6.0206,-10 0|0:85.7739:21:20:700:0:0:0,-6.0206,-10 0|0:82.7637:19:19:682:0:0:0,-5.71957,-10 0|0:55.671:10:10:368:0:0:0,-3.0103,-10 0|0:99:41:40:1434:0:0:0,-10,-10 0|0:76.7431:17:17:614:0:0:0,-5.11751,-10 0|0:67.7122:14:14:499:0:0:0,-4.21442,-10 0|0:99:40:40:1413:0:0:0,-10,-10 0|0:76.7431:17:17:601:0:0:0,-5.11751,-10 0|0:82.7637:19:19:669:0:0:0,-5.71957,-10 0|0:99:35:35:1248:0:0:0,-10,-10 0|0:99:33:33:1210:0:0:0,-9.93399,-10 0|0:94.8042:23:23:810:0:0:0,-6.92369,-10 0|0:99:35:35:1283:0:0:0,-10,-10 0|0:82.7637:19:19:704:0:0:0,-5.71957,-10 0|0:70.7225:15:15:541:0:0:0,-4.51545,-10 0|0:67.7122:14:14:479:0:0:0,-4.21442,-10 0|0:37.6092:4:4:134:0:0:0,-1.20412,-10 0|0:58.6813:11:11:393:0:0:0,-3.31133,-10 0|0:99:39:36:1328:0:0:0,-10,-10 0|0:99:37:37:1309:0:0:0,-10,-10 0|0:91.7943:22:22:800:0:0:0,-6.62266,-10 0|0:91.7943:22:22:808:0:0:0,-6.62266,-10 0|0:91.7943:22:22:765:0:0:0,-6.62266,-10 0|0:43.6298:6:6:211:0:0:0,-1.80618,-10 0|0:85.7739:20:20:730:0:0:0,-6.0206,-10 0|0:55.671:10:10:376:0:0:0,-3.0103,-10 0|0:52.6607:9:9:336:0:0:0,-2.70927,-10 0|0:97.8139:24:24:890:0:0:0,-7.22472,-10 0|0:99:25:25:884:0:0:0,-7.52575,-10 0|0:70.7225:16:15:534:0:0:0,-4.51545,-10 scaffold_140 2196110 . A G 777.95 . AB=0.632353;ABP=13.3567;AC=4;AF=0.0217391;AN=184;AO=45;CIGAR=1X1M1X;DP=2020;DPB=2020.33;DPRA=0.868191;EPP=100.727;EPPR=3.16951;GTI=2;LEN=1;MEANALT=1;MQM=59.8;MQMR=59.4725;NS=92;NUMALT=1;ODDS=6.92204;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=1;QA=1584;QR=70372;RO=1964;RPP=100.727;RPPR=4250.43;RUN=1;SAF=45;SAP=100.727;SAR=0;SRF=976;SRP=3.16951;SRR=988;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:67.7122:14:14:491:0:0:0,-4.21442,-10 0|0:64.7019:13:13:460:0:0:0,-3.91339,-10 0|0:99:28:28:964:0:0:0,-8.42884,-10 0|0:55.671:10:10:342:0:0:0,-3.0103,-10 0|0:91.7943:22:22:806:0:0:0,-6.62266,-10 0|0:49.6504:8:8:294:0:0:0,-2.40824,-10 0|0:99:49:49:1742:0:0:0,-10,-10 0|0:97.8139:24:24:890:0:0:0,-7.22472,-10 0|0:76.7431:17:17:624:0:0:0,-5.11751,-10 0|0:43.6298:6:6:193:0:0:0,-1.80618,-10 0|0:52.6607:9:9:332:0:0:0,-2.70927,-10 0|0:40.6195:5:5:182:0:0:0,-1.50515,-10 0|0:99:27:26:962:0:0:0,-7.82678,-10 0|0:99:41:41:1487:0:0:0,-10,-10 0|0:99:30:30:1065:0:0:0,-9.0309,-10 0|0:99:32:32:1175:0:0:0,-9.63296,-10 0|0:99:28:28:1034:0:0:0,-8.42884,-10 0|0:58.6813:11:11:357:0:0:0,-3.31133,-10 0|0:99:28:28:1010:0:0:0,-8.42884,-10 0|0:99:39:39:1389:0:0:0,-10,-10 0|0:85.7739:20:20:695:0:0:0,-6.0206,-10 0|0:99:34:34:1223:0:0:0,-10,-10 0|1:0.00107046:10:0:0:10:347:-10,-3.0103,0 0|0:0.00427613:28:26:917:2:74:-1.17865,0,-10 0|0:94.8042:23:23:804:0:0:0,-6.92369,-10 0|1:67.7077:15:1:38:14:502:-10,0,-0.460641 0|0:99:27:27:910:0:0:0,-8.12781,-10 0|0:76.7431:17:17:610:0:0:0,-5.11751,-10 0|0:99:25:25:914:0:0:0,-7.52575,-10 0|0:99:33:33:1186:0:0:0,-9.93399,-10 0|0:43.6298:6:6:227:0:0:0,-1.80618,-10 0|0:61.6916:12:12:436:0:0:0,-3.61236,-10 0|0:70.7225:15:15:567:0:0:0,-4.51545,-10 0|0:79.7534:18:18:663:0:0:0,-5.41854,-10 0|0:79.7534:18:18:658:0:0:0,-5.41854,-10 0|0:52.6607:10:9:310:0:0:0,-2.70927,-10 0|0:64.7019:13:13:447:0:0:0,-3.91339,-10 0|0:99:33:33:1197:0:0:0,-9.93399,-10 0|0:88.7841:21:21:758:0:0:0,-6.32163,-10 0|0:82.7637:19:19:677:0:0:0,-5.71957,-10 0|0:99:47:47:1679:0:0:0,-10,-10 0|0:70.7225:15:15:524:0:0:0,-4.51545,-10 0|0:99:28:27:912:0:0:0,-8.12781,-10 0|0:99:34:34:1249:0:0:0,-10,-10 0|1:99:14:6:221:8:297:-10,0,-10 0|0:73.7328:16:16:576:0:0:0,-4.81648,-10 0|0:99:43:43:1554:0:0:0,-10,-10 0|0:99:27:26:913:0:0:0,-7.82678,-10 0|0:73.7328:16:16:570:0:0:0,-4.81648,-10 0|0:99:34:34:1219:0:0:0,-10,-10 0|0:76.7431:17:17:609:0:0:0,-5.11751,-10 0|1:99:29:18:665:11:364:-10,0,-10 0|0:79.7534:19:18:652:0:0:0,-5.41854,-10 0|0:43.6298:6:6:224:0:0:0,-1.80618,-10 0|0:99:51:51:1833:0:0:0,-10,-10 0|0:70.7225:15:15:506:0:0:0,-4.51545,-10 0|0:99:28:28:950:0:0:0,-8.42884,-10 0|0:55.671:10:10:333:0:0:0,-3.0103,-10 0|0:99:26:26:935:0:0:0,-7.82678,-10 0|0:76.7431:17:17:637:0:0:0,-5.11751,-10 0|0:99:31:31:1095:0:0:0,-9.33193,-10 0|0:85.7739:20:20:727:0:0:0,-6.0206,-10 0|0:85.7739:21:20:700:0:0:0,-6.0206,-10 0|0:82.7637:19:19:682:0:0:0,-5.71957,-10 0|0:55.671:10:10:368:0:0:0,-3.0103,-10 0|0:99:41:40:1434:0:0:0,-10,-10 0|0:76.7431:17:17:614:0:0:0,-5.11751,-10 0|0:67.7122:14:14:499:0:0:0,-4.21442,-10 0|0:99:40:40:1413:0:0:0,-10,-10 0|0:76.7431:17:17:601:0:0:0,-5.11751,-10 0|0:82.7637:19:19:669:0:0:0,-5.71957,-10 0|0:99:35:35:1248:0:0:0,-10,-10 0|0:99:33:33:1210:0:0:0,-9.93399,-10 0|0:94.8042:23:23:810:0:0:0,-6.92369,-10 0|0:99:35:35:1283:0:0:0,-10,-10 0|0:82.7637:19:19:704:0:0:0,-5.71957,-10 0|0:70.7225:15:15:541:0:0:0,-4.51545,-10 0|0:67.7122:14:14:479:0:0:0,-4.21442,-10 0|0:37.6092:4:4:134:0:0:0,-1.20412,-10 0|0:58.6813:11:11:393:0:0:0,-3.31133,-10 0|0:99:39:36:1328:0:0:0,-10,-10 0|0:99:37:37:1309:0:0:0,-10,-10 0|0:91.7943:22:22:800:0:0:0,-6.62266,-10 0|0:91.7943:22:22:808:0:0:0,-6.62266,-10 0|0:91.7943:22:22:765:0:0:0,-6.62266,-10 0|0:43.6298:6:6:211:0:0:0,-1.80618,-10 0|0:85.7739:20:20:730:0:0:0,-6.0206,-10 0|0:55.671:10:10:376:0:0:0,-3.0103,-10 0|0:52.6607:9:9:336:0:0:0,-2.70927,-10 0|0:97.8139:24:24:890:0:0:0,-7.22472,-10 0|0:99:25:25:884:0:0:0,-7.52575,-10 0|0:70.7225:16:15:534:0:0:0,-4.51545,-10 scaffold_140 2196112 . TG T 4156.82 . AB=0.504237;ABP=3.0471;AC=15;AF=0.0815217;AN=184;AO=173;CIGAR=1M1D6M;DP=2027;DPB=2005.88;DPRA=1.23028;EPP=9.65024;EPPR=3.04005;GTI=2;LEN=1;MEANALT=1.3125;MQM=57.3931;MQMR=59.7063;NS=92;NUMALT=1;ODDS=0.206819;PAIRED=0;PAIREDR=0;PAO=1;PQA=12;PQR=12;PRO=1;QA=5862;QR=65122;RO=1825;RPP=378.675;RPPR=3870.98;RUN=1;SAF=98;SAP=9.65024;SAR=75;SRF=926;SRP=3.8777;SRR=899;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:55.9128:14:14:511:0:0:0,-4.21442,-10 0|0:52.9025:13:13:443:0:0:0,-3.91339,-10 0|0:98.0559:28:28:1006:0:0:0,-8.42884,-10 0|0:43.8716:10:10:353:0:0:0,-3.0103,-10 0|0:79.9951:22:22:790:0:0:0,-6.62266,-10 0|0:37.851:8:8:289:0:0:0,-2.40824,-10 0|0:99:49:49:1750:0:0:0,-10,-10 0|0:86.0153:24:24:855:0:0:0,-7.22472,-10 0|0:64.9437:17:17:619:0:0:0,-5.11751,-10 0|1:0.0654016:6:0:0:6:193:-10,-1.80618,0 1|1:3.61491:9:0:0:9:306:-10,-2.70927,0 0|0:28.8201:5:5:178:0:0:0,-1.50515,-10 0|1:99:27:13:469:14:450:-10,0,-10 0|1:99:42:25:903:16:535:-10,0,-10 0|0:99:30:30:1065:0:0:0,-9.0309,-10 0|1:99:31:11:407:20:684:-10,0,-10 0|0:95.0461:28:27:983:0:0:0,-8.12781,-10 0|0:46.8819:11:11:364:0:0:0,-3.31133,-10 0|1:99:28:14:497:14:481:-10,0,-10 0|0:96.0014:39:38:1349:1:21:0,-8.04911,-10 0|0:73.9746:20:20:706:0:0:0,-6.0206,-10 0|0:99:34:34:1217:0:0:0,-10,-10 0|0:43.8716:10:10:359:0:0:0,-3.0103,-10 0|0:98.0559:28:28:982:0:0:0,-8.42884,-10 1|1:45.7591:24:0:0:23:747:-10,-6.92369,0 0|0:58.9231:15:15:548:0:0:0,-4.51545,-10 0|0:86.0153:27:24:844:0:0:0,-7.22472,-10 1|1:27.6973:17:0:0:17:599:-10,-5.11751,0 0|0:89.026:25:25:892:0:0:0,-7.52575,-10 0|1:99:33:19:657:14:517:-10,0,-10 0|0:31.8304:6:6:222:0:0:0,-1.80618,-10 0|0:52.9025:13:13:464:0:0:0,-3.91339,-10 0|0:58.9231:15:15:552:0:0:0,-4.51545,-10 0|0:64.9437:18:17:624:0:0:0,-5.11751,-10 0|0:67.954:18:18:652:0:0:0,-5.41854,-10 0|0:43.8716:10:10:362:0:0:0,-3.0103,-10 0|0:52.9025:13:13:457:0:0:0,-3.91339,-10 0|0:99:33:33:1175:0:0:0,-9.93399,-10 0|0:76.9849:21:21:759:0:0:0,-6.32163,-10 0|0:70.9643:19:19:705:0:0:0,-5.71957,-10 0|0:99:47:46:1656:0:0:0,-10,-10 0|0:52.9025:15:13:479:0:0:0,-3.91339,-10 0|0:95.0461:28:27:939:0:0:0,-8.12781,-10 0|0:99:34:34:1212:0:0:0,-10,-10 0|0:55.9128:14:14:514:0:0:0,-4.21442,-10 0|0:61.9334:16:16:562:0:0:0,-4.81648,-10 0|0:99:43:43:1544:0:0:0,-10,-10 0|0:46.5938:27:25:841:1:38:0,-2.88181,-10 0|0:67.954:18:18:611:0:0:0,-5.41854,-10 0|1:99:34:22:782:12:437:-10,0,-10 0|0:64.9437:18:17:615:0:0:0,-5.11751,-10 0|1:99:29:11:399:18:581:-10,0,-10 0|0:67.954:19:18:617:0:0:0,-5.41854,-10 0|0:31.8304:6:6:214:0:0:0,-1.80618,-10 0|0:99:51:51:1801:0:0:0,-10,-10 0|0:61.9334:16:16:552:0:0:0,-4.81648,-10 0|0:95.0461:28:27:958:0:0:0,-8.12781,-10 0|0:43.8716:10:10:343:0:0:0,-3.0103,-10 0|0:92.0361:26:26:951:0:0:0,-7.82678,-10 0|0:64.9437:17:17:634:0:0:0,-5.11751,-10 0|0:99:31:30:1080:0:0:0,-9.0309,-10 0|0:73.9746:20:20:722:0:0:0,-6.0206,-10 0|0:76.9849:21:21:750:0:0:0,-6.32163,-10 0|0:70.9643:19:19:685:0:0:0,-5.71957,-10 0|0:43.8716:10:10:368:0:0:0,-3.0103,-10 0|0:99:41:39:1394:0:0:0,-10,-10 0|0:61.9334:17:16:585:0:0:0,-4.81648,-10 0|0:55.9128:14:14:501:0:0:0,-4.21442,-10 0|0:62.1979:40:37:1315:2:52:0,-4.27035,-10 0|0:64.9437:17:17:593:0:0:0,-5.11751,-10 0|0:70.9643:19:19:649:0:0:0,-5.71957,-10 0|0:99:35:35:1246:0:0:0,-10,-10 0|0:99:33:33:1159:0:0:0,-9.93399,-10 0|0:76.9849:23:21:727:0:0:0,-6.32163,-10 0|0:99:35:35:1253:0:0:0,-10,-10 0|0:70.9643:19:19:688:0:0:0,-5.71957,-10 0|0:55.9128:15:14:515:0:0:0,-4.21442,-10 0|0:52.9025:14:13:455:0:0:0,-3.91339,-10 0|0:25.8098:4:4:135:0:0:0,-1.20412,-10 0|0:46.8819:11:11:395:0:0:0,-3.31133,-10 0|0:99:39:39:1396:0:0:0,-10,-10 0|0:99:37:35:1243:0:0:0,-10,-10 0|0:76.9849:22:21:756:0:0:0,-6.32163,-10 0|0:83.0055:23:23:820:0:0:0,-6.92369,-10 0|0:76.9849:22:21:762:0:0:0,-6.32163,-10 0|1:0.0325777:6:0:0:5:190:-10,-1.50515,0 0|0:73.9746:20:20:715:0:0:0,-6.0206,-10 0|0:43.8716:10:10:370:0:0:0,-3.0103,-10 0|0:40.8613:9:9:325:0:0:0,-2.70927,-10 0|0:86.0153:24:24:880:0:0:0,-7.22472,-10 0|0:48.0539:25:24:849:1:31:0,-3.02781,-10 0|0:61.9334:16:16:559:0:0:0,-4.81648,-10 scaffold_181 139424 . G C 502.355 . AB=0.814815;ABP=26.2531;AC=2;AF=0.0108696;AN=184;AO=23;CIGAR=1X;DP=1546;DPB=1546;DPRA=1.23944;EPP=5.3706;EPPR=3.25126;GTI=1;LEN=1;MEANALT=1;MQM=59.4348;MQMR=59.9219;NS=92;NUMALT=1;ODDS=4.51448;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=814;QR=56045;RO=1523;RPP=52.9542;RPPR=3138.73;RUN=1;SAF=14;SAP=5.3706;SAR=9;SRF=748;SRP=4.0497;SRR=775;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.5916:13:13:487:0:0:0,-3.91339,-10 0/0:65.6122:15:15:559:0:0:0,-4.51545,-10 0/0:99:28:28:1049:0:0:0,-8.42884,-10 0/0:50.5607:10:10:361:0:0:0,-3.0103,-10 0/0:71.6328:17:17:598:0:0:0,-5.11751,-10 0/0:38.5195:6:6:201:0:0:0,-1.80618,-10 0/0:98.7259:26:26:951:0:0:0,-7.82678,-10 0/0:95.7135:25:25:907:0:0:0,-7.52575,-10 0/0:86.684:22:22:824:0:0:0,-6.62266,-10 0/0:32.4989:4:4:139:0:0:0,-1.20412,-10 0/0:38.5195:6:6:204:0:0:0,-1.80618,-10 0/0:41.5298:7:7:265:0:0:0,-2.10721,-10 0/0:74.643:18:18:648:0:0:0,-5.41854,-10 0/0:95.7135:25:25:898:0:0:0,-7.52575,-10 0/0:62.6019:14:14:508:0:0:0,-4.21442,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:86.684:22:22:833:0:0:0,-6.62266,-10 0/0:32.4989:4:4:149:0:0:0,-1.20412,-10 0/0:92.704:24:24:845:0:0:0,-7.22472,-10 0/0:98.7259:26:26:975:0:0:0,-7.82678,-10 0/0:83.6738:21:21:755:0:0:0,-6.32163,-10 0/0:95.7135:25:25:929:0:0:0,-7.52575,-10 0/0:59.5916:13:13:464:0:0:0,-3.91339,-10 0/1:0.0469105:17:0:0:17:609:-10,-5.11751,0 0/0:71.6328:17:17:639:0:0:0,-5.11751,-10 0/0:80.6636:20:20:707:0:0:0,-6.0206,-10 0/0:62.6019:14:14:529:0:0:0,-4.21442,-10 0/0:56.5813:12:12:452:0:0:0,-3.61236,-10 0/0:80.6636:20:20:753:0:0:0,-6.0206,-10 0/0:99:35:34:1254:1:15:0,-7.49198,-10 0/0:35.5092:5:5:190:0:0:0,-1.50515,-10 0/0:44.5401:8:8:282:0:0:0,-2.40824,-10 0/0:71.6328:17:17:626:0:0:0,-5.11751,-10 0/0:32.4989:4:4:150:0:0:0,-1.20412,-10 0/0:71.6328:17:17:614:0:0:0,-5.11751,-10 0/0:44.5401:8:8:303:0:0:0,-2.40824,-10 0/0:47.5504:9:9:333:0:0:0,-2.70927,-10 0/0:80.6636:20:20:746:0:0:0,-6.0206,-10 0/0:53.571:11:11:376:0:0:0,-3.31133,-10 0/0:50.5607:10:10:336:0:0:0,-3.0103,-10 0/0:68.6224:16:16:597:0:0:0,-4.81648,-10 0/0:77.6533:19:19:705:0:0:0,-5.71957,-10 0/0:80.6636:20:20:725:0:0:0,-6.0206,-10 0/0:86.684:22:22:807:0:0:0,-6.62266,-10 0/0:65.6122:15:15:567:0:0:0,-4.51545,-10 0/0:44.5401:8:8:282:0:0:0,-2.40824,-10 0/0:95.7135:25:25:918:0:0:0,-7.52575,-10 0/0:89.6941:23:23:869:0:0:0,-6.92369,-10 0/0:65.6122:15:15:537:0:0:0,-4.51545,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:56.5813:12:12:447:0:0:0,-3.61236,-10 0/0:99:27:27:1015:0:0:0,-8.12781,-10 0/0:74.643:18:18:636:0:0:0,-5.41854,-10 0/0:23.468:1:1:38:0:0:0,-0.30103,-3.8 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:32.4989:4:4:152:0:0:0,-1.20412,-10 0/1:99:10:5:190:5:190:-10,0,-10 0/0:53.571:11:11:396:0:0:0,-3.31133,-10 0/0:80.6636:20:20:753:0:0:0,-6.0206,-10 0/0:41.5298:7:7:262:0:0:0,-2.10721,-10 0/0:99:32:32:1147:0:0:0,-9.63296,-10 0/0:74.643:18:18:673:0:0:0,-5.41854,-10 0/0:92.704:24:24:876:0:0:0,-7.22472,-10 0/0:62.6019:14:14:530:0:0:0,-4.21442,-10 0/0:44.5401:8:8:304:0:0:0,-2.40824,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:98.7259:26:26:926:0:0:0,-7.82678,-10 0/0:56.5813:12:12:454:0:0:0,-3.61236,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:80.6636:20:20:751:0:0:0,-6.0206,-10 0/0:47.5504:9:9:318:0:0:0,-2.70927,-10 0/0:77.6533:19:19:715:0:0:0,-5.71957,-10 0/0:80.6636:20:20:752:0:0:0,-6.0206,-10 0/0:47.5504:9:9:337:0:0:0,-2.70927,-10 0/0:86.684:22:22:824:0:0:0,-6.62266,-10 0/0:68.6224:16:16:608:0:0:0,-4.81648,-10 0/0:56.5813:12:12:440:0:0:0,-3.61236,-10 0/0:56.5813:12:12:434:0:0:0,-3.61236,-10 0/0:41.5298:7:7:261:0:0:0,-2.10721,-10 0/0:65.6122:15:15:568:0:0:0,-4.51545,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:98.7259:26:26:969:0:0:0,-7.82678,-10 0/0:98.7259:26:26:945:0:0:0,-7.82678,-10 0/0:68.6224:16:16:574:0:0:0,-4.81648,-10 0/0:68.6224:16:16:606:0:0:0,-4.81648,-10 0/0:50.5607:10:10:370:0:0:0,-3.0103,-10 0/0:59.5916:13:13:476:0:0:0,-3.91339,-10 0/0:53.571:11:11:355:0:0:0,-3.31133,-10 0/0:35.5092:5:5:167:0:0:0,-1.50515,-10 0/0:74.643:18:18:682:0:0:0,-5.41854,-10 0/0:86.684:22:22:825:0:0:0,-6.62266,-10 0/0:62.6019:14:14:523:0:0:0,-4.21442,-10 scaffold_181 139468 . G A 46963.3 . AB=0.53178;ABP=7.15082;AC=131;AF=0.711957;AN=184;AO=1612;CIGAR=1X;DP=2243;DPB=2243;DPRA=1.24139;EPP=3.27433;EPPR=3.09661;GTI=2;LEN=1;MEANALT=1.02817;MQM=59.8356;MQMR=59.9507;NS=92;NUMALT=1;ODDS=1.74589;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=58247;QR=22758;RO=629;RPP=3408.53;RPPR=1334.34;RUN=1;SAF=788;SAP=4.7561;SAR=824;SRF=310;SRP=3.28993;SRR=319;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:76.6364:25:0:0:25:903:-10,-7.52575,0 1/1:31.4819:10:0:0:10:380:-10,-3.0103,0 1/1:70.6158:23:0:0:23:819:-10,-6.92369,0 1/1:34.4922:11:0:0:11:416:-10,-3.31133,0 0/0:46.6841:22:22:771:0:0:0,-6.62266,-10 0/0:16.5811:12:12:447:0:0:0,-3.61236,-10 1/1:99:34:0:0:34:1203:-10,-10,0 1/1:82.657:27:0:0:27:1013:-10,-8.12781,0 1/1:61.5849:20:0:0:20:744:-10,-6.0206,0 0/1:0.22998:5:5:168:0:0:0,-1.50515,-10 0/0:13.5708:11:11:392:0:0:0,-3.31133,-10 0/1:0.22998:5:5:130:0:0:0,-1.50515,-10 0/0:97.8514:39:39:1392:0:0:0,-10,-10 0/1:99:38:15:544:23:851:-10,0,-10 0/1:99:37:21:757:16:538:-10,0,-10 0/1:99:39:13:484:26:952:-10,0,-10 0/1:99:32:20:727:12:419:-10,0,-10 0/0:10.5605:10:10:380:0:0:0,-3.0103,-10 1/1:82.657:27:0:0:27:971:-10,-8.12781,0 0/1:99:44:23:835:21:766:-10,0,-10 1/1:67.6055:22:0:0:22:797:-10,-6.62266,0 0/1:99:40:13:476:27:986:-10,0,-10 1/1:43.5231:14:0:0:14:504:-10,-4.21442,0 0/0:34.6429:18:18:624:0:0:0,-5.41854,-10 1/1:67.6055:22:0:0:22:832:-10,-6.62266,0 1/1:76.6364:25:0:0:25:922:-10,-7.52575,0 1/1:82.657:27:0:0:27:941:-10,-8.12781,0 1/1:52.554:17:0:0:17:613:-10,-5.11751,0 1/1:76.6364:25:0:0:25:929:-10,-7.52575,0 1/1:99:36:0:0:36:1336:-10,-10,0 1/1:40.5128:13:0:0:13:452:-10,-3.91339,0 1/1:37.5025:12:0:0:12:448:-10,-3.61236,0 1/1:64.5952:21:0:0:21:788:-10,-6.32163,0 0/0:13.5708:11:11:405:0:0:0,-3.31133,-10 1/1:85.6672:28:0:0:28:1016:-10,-8.42884,0 1/1:22.451:7:0:0:7:261:-10,-2.10721,0 1/1:43.5231:14:0:0:14:488:-10,-4.21442,0 0/1:99:35:15:554:20:750:-10,0,-10 1/1:49.5437:16:0:0:16:587:-10,-4.81648,0 1/1:88.6774:29:0:0:29:1032:-10,-8.72987,0 1/1:97.7068:32:0:0:32:1170:-10,-9.63296,0 1/1:85.6672:28:0:0:28:946:-10,-8.42884,0 1/1:43.5231:14:0:0:14:497:-10,-4.21442,0 1/1:99:43:0:0:43:1571:-10,-10,0 1/1:94.6974:31:0:0:31:1148:-10,-9.33193,0 1/1:58.5746:19:0:0:19:702:-10,-5.71957,0 1/1:99:56:0:0:56:2011:-10,-10,0 1/1:99:42:0:0:42:1501:-10,-10,0 1/1:52.554:17:0:0:17:608:-10,-5.11751,0 1/1:99:50:0:0:50:1783:-10,-10,0 1/1:55.5643:18:0:0:18:666:-10,-5.41854,0 1/1:99:45:0:0:44:1601:-10,-10,0 1/1:55.5643:18:0:0:18:637:-10,-5.41854,0 1/1:31.4819:10:0:0:10:365:-10,-3.0103,0 1/1:99:55:1:38:54:1966:-10,-10,0 1/1:55.5643:18:0:0:18:617:-10,-5.41854,0 0/1:99:18:6:226:12:443:-10,0,-10 0/0:13.5708:11:11:410:0:0:0,-3.31133,-10 0/0:34.6429:18:18:678:0:0:0,-5.41854,-10 1/1:49.5437:16:0:0:16:578:-10,-4.81648,0 0/0:91.8367:37:37:1285:0:0:0,-10,-10 0/0:46.6841:22:22:821:0:0:0,-6.62266,-10 0/1:99:64:29:1056:35:1284:-10,0,-10 0/0:40.6635:20:20:693:0:0:0,-6.0206,-10 1/1:43.5231:14:0:0:14:506:-10,-4.21442,0 0/1:99:36:19:684:17:619:-10,0,-10 1/1:67.6055:22:0:0:22:819:-10,-6.62266,0 0/0:13.5708:11:11:408:0:0:0,-3.31133,-10 0/0:99:54:54:1935:0:0:0,-10,-10 0/0:25.612:15:15:524:0:0:0,-4.51545,-10 1/1:43.5231:14:0:0:14:460:-10,-4.21442,0 0/1:99:33:17:625:16:581:-10,0,-10 1/1:33.2098:27:1:38:26:956:-10,-2.89645,0 1/1:46.5334:15:0:0:15:545:-10,-4.51545,0 0/1:99:32:13:451:19:594:-10,0,-10 0/0:34.6429:18:18:672:0:0:0,-5.41854,-10 0/0:31.6326:17:17:642:0:0:0,-5.11751,-10 1/1:43.5231:14:0:0:14:518:-10,-4.21442,0 1/1:22.451:7:0:0:7:260:-10,-2.10721,0 1/1:43.5231:14:0:0:14:524:-10,-4.21442,0 1/1:99:52:0:0:52:1877:-10,-10,0 1/1:85.6672:28:0:0:28:1014:-10,-8.42884,0 0/1:99:24:17:646:7:255:-10,0,-10 1/1:64.5952:21:0:0:21:738:-10,-6.32163,0 0/0:99:40:40:1491:0:0:0,-10,-10 0/0:10.5605:10:10:349:0:0:0,-3.0103,-10 1/1:52.554:18:0:0:17:628:-10,-5.11751,0 1/1:61.5849:20:0:0:20:692:-10,-6.0206,0 1/1:31.4819:10:0:0:10:380:-10,-3.0103,0 1/1:49.5437:16:0:0:16:520:-10,-4.81648,0 1/1:99:34:0:0:34:1216:-10,-10,0 1/1:67.6055:22:0:0:22:794:-10,-6.62266,0 scaffold_181 260903 . G A 2539.61 . AB=0.601266;ABP=17.0836;AC=7;AF=0.0380435;AN=184;AO=104;CIGAR=1X;DP=2307;DPB=2307;DPRA=1.06031;EPP=3.0103;EPPR=5.68167;GTI=3;LEN=1;MEANALT=1.125;MQM=59.6635;MQMR=59.9336;NS=92;NUMALT=1;ODDS=0.324787;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3696;QR=79366;RO=2198;RPP=228.843;RPPR=4775.91;RUN=1;SAF=52;SAP=3.0103;SAR=52;SRF=1125;SRP=5.68167;SRR=1073;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.9404:20:20:739:0:0:0,-6.0206,-10 0/0:39.8065:7:7:266:0:0:0,-2.10721,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:66.8992:16:16:597:0:0:0,-4.81648,-10 0/0:60.8786:14:14:504:0:0:0,-4.21442,-10 0/0:54.858:12:12:425:0:0:0,-3.61236,-10 0/0:99:44:44:1565:0:0:0,-10,-10 0/0:99:30:30:1080:0:0:0,-9.0309,-10 0/0:66.8992:16:16:565:0:0:0,-4.81648,-10 0/0:33.7859:5:5:179:0:0:0,-1.50515,-10 0/0:51.8477:11:11:370:0:0:0,-3.31133,-10 0/1:0.0017731:7:0:0:7:255:-10,-2.10721,0 0/1:99:32:19:694:12:422:-10,0,-10 0/0:99:50:50:1829:0:0:0,-10,-10 0/1:99:32:17:613:15:570:-10,0,-10 0/0:57.8206:22:21:795:1:16:0,-3.68024,-10 0/0:99:27:27:1013:0:0:0,-8.12781,-10 0/0:63.8889:15:15:532:0:0:0,-4.51545,-10 0/0:71.4288:33:32:1192:1:35:0,-4.91548,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:87.971:23:23:770:0:0:0,-6.92369,-10 0/0:99:38:37:1350:1:16:0,-8.25936,-10 0/0:60.8786:14:14:518:0:0:0,-4.21442,-10 0/0:44.8206:22:21:753:1:29:0,-2.38024,-10 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:99:31:31:1083:0:0:0,-9.33193,-10 0/0:75.9301:19:19:665:0:0:0,-5.71957,-10 0/0:75.9301:19:19:693:0:0:0,-5.71957,-10 0/0:99:29:29:1024:0:0:0,-8.72987,-10 0/0:99:37:37:1314:0:0:0,-10,-10 0/0:33.7859:5:5:159:0:0:0,-1.50515,-10 0/0:42.8168:8:8:299:0:0:0,-2.40824,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:93.9906:25:25:948:0:0:0,-7.52575,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:69.9095:17:17:606:0:0:0,-5.11751,-10 0/0:60.8786:14:14:496:0:0:0,-4.21442,-10 0/0:99:43:43:1607:0:0:0,-10,-10 0/0:90.981:25:24:880:0:0:0,-7.22472,-10 0/0:66.2963:25:24:813:1:16:0,-4.52781,-10 0/0:99:44:44:1623:0:0:0,-10,-10 0/0:69.1363:26:25:899:1:16:0,-4.81181,-10 0/0:72.9198:18:18:653:0:0:0,-5.41854,-10 0/0:99:32:32:1143:0:0:0,-9.63296,-10 0/0:83.4238:31:30:1129:1:16:0,-6.24057,-10 0/0:60.8786:14:14:488:0:0:0,-4.21442,-10 0/0:99:48:48:1753:0:0:0,-10,-10 0/0:99:31:31:1115:0:0:0,-9.33193,-10 0/0:36.7962:6:6:226:0:0:0,-1.80618,-10 0/0:99:49:49:1760:0:0:0,-10,-10 0/0:66.2963:25:24:883:1:16:0,-4.52781,-10 0/0:90.0591:41:39:1419:1:38:0,-6.90414,-10 0/0:60.8786:14:14:521:0:0:0,-4.21442,-10 0/0:57.8683:13:13:475:0:0:0,-3.91339,-10 0/0:99:59:59:2016:0:0:0,-10,-10 0/0:69.9095:17:17:570:0:0:0,-5.11751,-10 0/0:99:37:37:1320:0:0:0,-10,-10 0/1:0.00709673:9:0:0:9:313:-10,-2.70927,0 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:57.8683:13:13:478:0:0:0,-3.91339,-10 0/0:99:36:36:1337:0:0:0,-10,-10 0/0:99:27:27:975:0:0:0,-8.12781,-10 0/0:99:42:42:1543:0:0:0,-10,-10 0/0:99:34:34:1234:0:0:0,-10,-10 0/0:69.9095:17:17:611:0:0:0,-5.11751,-10 0/1:99:29:14:507:15:537:-10,0,-10 0/0:99:28:28:1003:0:0:0,-8.42884,-10 0/0:69.9095:17:17:611:0:0:0,-5.11751,-10 0/0:99:33:32:1144:0:0:0,-9.63296,-10 0/0:69.9095:17:17:571:0:0:0,-5.11751,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/0:99:37:37:1329:0:0:0,-10,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:93.9906:25:25:867:0:0:0,-7.52575,-10 0/0:99:38:38:1387:0:0:0,-10,-10 0/0:90.981:25:24:874:0:0:0,-7.22472,-10 0/1:2.35065:17:0:0:17:645:-10,-5.11751,0 0/0:90.981:24:24:859:0:0:0,-7.22472,-10 0/0:39.8065:7:7:259:0:0:0,-2.10721,-10 0/0:72.9198:18:18:660:0:0:0,-5.41854,-10 0/0:99:47:47:1667:0:0:0,-10,-10 0/0:99:33:33:1195:0:0:0,-9.93399,-10 0/1:99:32:12:396:20:756:-10,0,-10 0/0:99:27:27:958:0:0:0,-8.12781,-10 0/0:99:29:29:1047:0:0:0,-8.72987,-10 0/0:39.8065:7:7:238:0:0:0,-2.10721,-10 0/0:99:30:30:1040:0:0:0,-9.0309,-10 0/0:75.9301:19:19:719:0:0:0,-5.71957,-10 0/0:39.8065:7:7:262:0:0:0,-2.10721,-10 0/0:45.8271:9:9:332:0:0:0,-2.70927,-10 0/0:75.9301:19:19:697:0:0:0,-5.71957,-10 0/0:72.9198:18:18:660:0:0:0,-5.41854,-10 scaffold_181 617864 . G A 297.976 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=14;CIGAR=1X;DP=2278;DPB=2278;DPRA=0.763393;EPP=8.59409;EPPR=3.10621;GTI=0;LEN=1;MEANALT=1;MQM=59.4286;MQMR=46.0534;NS=92;NUMALT=1;ODDS=10.6854;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=485;QR=82870;RO=2264;RPP=33.4109;RPPR=4104.85;RUN=1;SAF=10;SAP=8.59409;SAR=4;SRF=1133;SRP=3.01414;SRR=1131;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:94.5853:18:18:661:0:0:0,-5.41854,-10 0/0:73.5146:11:11:384:0:0:0,-3.31133,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:79.5351:13:13:468:0:0:0,-3.91339,-10 0/0:94.5853:18:18:682:0:0:0,-5.41854,-10 0/0:76.5248:12:12:451:0:0:0,-3.61236,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/0:99:26:26:924:0:0:0,-7.82678,-10 0/0:70.5043:10:10:379:0:0:0,-3.0103,-10 0/0:85.5556:15:15:540:0:0:0,-4.51545,-10 0/0:70.5043:10:10:348:0:0:0,-3.0103,-10 0/0:99:47:47:1713:0:0:0,-10,-10 0/0:99:44:44:1565:0:0:0,-10,-10 0/0:99:46:46:1689:0:0:0,-10,-10 0/0:99:41:41:1515:0:0:0,-10,-10 0/0:99:52:52:1915:0:0:0,-10,-10 0/0:88.5657:16:16:594:0:0:0,-4.81648,-10 0/0:99:27:27:1009:0:0:0,-8.12781,-10 0/0:99:59:59:2120:0:0:0,-10,-10 0/0:99:27:27:959:0:0:0,-8.12781,-10 0/0:99:44:44:1596:0:0:0,-10,-10 0/0:46.4062:12:11:413:1:15:0,-1.03318,-10 0/0:99:32:32:1169:0:0:0,-9.63296,-10 0/0:99:26:26:980:0:0:0,-7.82678,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:99:24:24:854:0:0:0,-7.22472,-10 0/0:70.5043:10:10:379:0:0:0,-3.0103,-10 0/0:94.5853:18:18:680:0:0:0,-5.41854,-10 0/0:99:38:38:1427:0:0:0,-10,-10 0/0:70.5043:10:10:355:0:0:0,-3.0103,-10 0/0:58.4631:6:6:228:0:0:0,-1.80618,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:91.5757:17:17:644:0:0:0,-5.11751,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:67.494:9:9:337:0:0:0,-2.70927,-10 0/0:73.5146:11:11:417:0:0:0,-3.31133,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:91.5757:17:17:626:0:0:0,-5.11751,-10 0/0:76.5248:12:12:419:0:0:0,-3.61236,-10 0/0:99:26:26:979:0:0:0,-7.82678,-10 0/0:99:21:21:730:0:0:0,-6.32163,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:99:40:40:1473:0:0:0,-10,-10 0/0:99:23:23:795:0:0:0,-6.92369,-10 0/0:99:24:24:890:0:0:0,-7.22472,-10 0/0:99:59:59:2077:0:0:0,-10,-10 0/0:99:37:37:1391:0:0:0,-10,-10 0/0:99:26:26:984:0:0:0,-7.82678,-10 0/0:99:31:31:1081:0:0:0,-9.33193,-10 0/0:94.5853:18:18:676:0:0:0,-5.41854,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:82.5454:14:14:506:0:0:0,-4.21442,-10 0/0:61.4734:7:7:266:0:0:0,-2.10721,-10 0/0:99:53:53:1997:0:0:0,-10,-10 0/0:99:22:22:833:0:0:0,-6.62266,-10 0/0:99:25:25:914:0:0:0,-7.52575,-10 0/0:91.5757:17:17:630:0:0:0,-5.11751,-10 0/0:91.5757:17:17:620:0:0:0,-5.11751,-10 0/0:79.5351:13:13:471:0:0:0,-3.91339,-10 0/0:99:45:45:1672:0:0:0,-10,-10 0/0:99:22:22:757:0:0:0,-6.62266,-10 0/0:99:46:46:1698:0:0:0,-10,-10 0/0:99:21:21:783:0:0:0,-6.32163,-10 0/0:91.5757:17:17:639:0:0:0,-5.11751,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/1:99:26:13:482:13:470:-10,0,-10 0/0:82.5454:14:14:515:0:0:0,-4.21442,-10 0/0:99:32:32:1156:0:0:0,-9.63296,-10 0/0:85.5556:15:15:567:0:0:0,-4.51545,-10 0/0:99:22:22:789:0:0:0,-6.62266,-10 0/0:99:20:20:755:0:0:0,-6.0206,-10 0/0:99:20:20:727:0:0:0,-6.0206,-10 0/0:99:24:24:861:0:0:0,-7.22472,-10 0/0:99:27:27:1000:0:0:0,-8.12781,-10 0/0:97.5942:19:19:640:0:0:0,-5.71957,-10 0/0:88.5657:16:16:579:0:0:0,-4.81648,-10 0/0:70.5043:10:10:343:0:0:0,-3.0103,-10 0/0:70.5043:10:10:373:0:0:0,-3.0103,-10 0/0:99:20:20:734:0:0:0,-6.0206,-10 0/0:99:38:38:1425:0:0:0,-10,-10 0/0:99:41:41:1515:0:0:0,-10,-10 0/0:99:27:27:957:0:0:0,-8.12781,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:99:30:30:1084:0:0:0,-9.0309,-10 0/0:82.5454:14:14:482:0:0:0,-4.21442,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:99:22:22:829:0:0:0,-6.62266,-10 0/0:88.5657:16:16:601:0:0:0,-4.81648,-10 0/0:99:28:28:1008:0:0:0,-8.42884,-10 0/0:99:30:30:1081:0:0:0,-9.0309,-10 0/0:91.5757:17:17:635:0:0:0,-5.11751,-10 scaffold_181 642211 . G A 38785.5 . AB=0.55814;ABP=11.8477;AC=139;AF=0.747312;AN=186;AO=1325;CIGAR=1X;DP=1788;DPB=1788;DPRA=0.95819;EPP=8.33491;EPPR=3.01501;GTI=1;LEN=1;MEANALT=1.02632;MQM=59.9842;MQMR=60;NS=93;NUMALT=1;ODDS=0.0855482;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=48020;QR=16646;RO=461;RPP=2759.89;RPPR=961.101;RUN=1;SAF=648;SAP=4.38857;SAR=677;SRF=235;SRP=3.39184;SRR=226;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:11.6442:15:1:37:14:496:-10,0,-0.360641 1/1:40.2088:12:0:0:12:448:-10,-3.61236,0 0/1:99:16:7:234:9:341:-10,0,-10 0/0:16.5069:10:10:366:0:0:0,-3.0103,-10 1/1:31.1779:9:0:0:9:316:-10,-2.70927,0 1/1:49.2397:15:0:0:15:566:-10,-4.51545,0 1/1:99:40:0:0:40:1446:-10,-10,0 0/0:73.7026:29:29:1040:0:0:0,-8.72987,-10 0/0:13.4966:9:9:319:0:0:0,-2.70927,-10 1/1:16.1264:4:0:0:4:151:-10,-1.20412,0 1/1:22.147:6:0:0:6:226:-10,-1.80618,0 1/1:25.1573:7:0:0:7:262:-10,-2.10721,0 0/0:79.7232:31:31:1109:0:0:0,-9.33193,-10 0/1:99:36:21:794:15:546:-10,0,-10 0/1:99:18:8:279:10:378:-10,0,-10 1/1:67.3015:21:0:0:21:732:-10,-6.32163,0 1/1:88.3734:28:0:0:28:1035:-10,-8.42884,0 0/0:16.5069:10:10:367:0:0:0,-3.0103,-10 1/1:76.3324:24:0:0:24:859:-10,-7.22472,0 0/1:99:35:17:596:18:653:-10,0,-10 0/1:99:16:5:184:11:371:-10,0,-10 0/0:76.7129:30:30:1110:0:0:0,-9.0309,-10 1/1:25.1573:7:0:0:7:264:-10,-2.10721,0 1/1:52.25:16:0:0:16:600:-10,-4.81648,0 1/1:49.2397:15:0:0:15:524:-10,-4.51545,0 1/1:91.3835:29:0:0:29:1068:-10,-8.72987,0 1/1:64.2912:20:0:0:20:731:-10,-6.0206,0 1/1:40.2088:12:0:0:12:456:-10,-3.61236,0 1/1:67.3015:21:0:0:21:748:-10,-6.32163,0 1/1:99:38:0:0:38:1395:-10,-10,0 1/1:28.1676:8:0:0:8:291:-10,-2.40824,0 1/1:22.147:6:0:0:6:223:-10,-1.80618,0 1/1:37.1985:11:0:0:11:372:-10,-3.31133,0 0/0:19.5172:11:11:356:0:0:0,-3.31133,-10 1/1:58.2706:18:0:0:18:671:-10,-5.41854,0 1/1:8.17507:8:1:14:7:233:-10,-0.10515,0 0/0:28.5481:14:14:532:0:0:0,-4.21442,-10 0/1:99:26:15:525:11:414:-10,0,-10 1/1:19.1367:5:0:0:5:189:-10,-1.50515,0 1/1:52.25:16:0:0:16:569:-10,-4.81648,0 1/1:79.3426:25:0:0:25:832:-10,-7.52575,0 1/1:88.3734:28:0:0:28:1027:-10,-8.42884,0 1/1:82.3529:26:0:0:26:962:-10,-7.82678,0 1/1:97.403:31:0:0:31:1099:-10,-9.33193,0 1/1:76.3324:24:0:0:24:841:-10,-7.22472,0 1/1:43.2191:13:0:0:13:487:-10,-3.91339,0 1/1:99:33:0:0:33:1227:-10,-9.93399,0 1/1:99:36:0:0:36:1322:-10,-10,0 1/1:52.25:16:0:0:16:602:-10,-4.81648,0 1/1:99:40:0:0:40:1349:-10,-10,0 1/1:46.2294:14:0:0:14:518:-10,-4.21442,0 1/1:99:40:0:0:40:1474:-10,-10,0 1/1:55.2603:17:0:0:17:630:-10,-5.11751,0 1/1:22.147:6:0:0:6:218:-10,-1.80618,0 1/1:99:46:0:0:46:1668:-10,-10,0 1/1:40.2088:12:0:0:12:443:-10,-3.61236,0 1/1:67.3015:21:0:0:21:738:-10,-6.32163,0 1/1:13.1161:3:0:0:3:92:-8.58667,-0.90309,0 0/0:67.682:27:27:968:0:0:0,-8.12781,-10 1/1:34.1882:10:0:0:10:379:-10,-3.0103,0 1/1:97.403:31:0:0:31:1136:-10,-9.33193,0 0/0:49.6202:21:21:748:0:0:0,-6.32163,-10 1/1:99:39:0:0:39:1401:-10,-10,0 1/1:55.2603:17:0:0:17:632:-10,-5.11751,0 1/1:40.2088:12:0:0:12:401:-10,-3.61236,0 0/1:99:28:17:615:11:407:-10,0,-10 1/1:55.2603:17:0:0:17:636:-10,-5.11751,0 1/1:22.147:6:0:0:6:225:-10,-1.80618,0 0/1:99:30:17:625:13:490:-10,0,-10 1/1:34.1882:11:0:0:10:376:-10,-3.0103,0 1/1:55.2603:17:0:0:17:645:-10,-5.11751,0 1/1:99:34:0:0:34:1236:-10,-10,0 1/1:64.2912:20:0:0:20:713:-10,-6.0206,0 1/1:34.1882:10:0:0:10:343:-10,-3.0103,0 1/1:91.3835:29:0:0:29:1069:-10,-8.72987,0 1/1:46.2294:14:0:0:14:473:-10,-4.21442,0 1/1:31.1779:9:0:0:9:287:-10,-2.70927,0 0/0:28.5481:14:14:519:0:0:0,-4.21442,-10 0/1:0.332679:6:6:228:0:0:0,-1.80618,-10 0/0:25.5378:13:13:480:0:0:0,-3.91339,-10 0/0:99:46:46:1682:0:0:0,-10,-10 0/0:70.6923:28:28:1002:0:0:0,-8.42884,-10 0/1:99:24:10:370:14:506:-10,0,-10 0/1:99:21:8:268:13:449:-10,0,-10 1/1:99:33:0:0:33:1193:-10,-9.93399,0 1/1:25.1573:8:0:0:7:259:-10,-2.10721,0 1/1:49.2397:15:0:0:15:536:-10,-4.51545,0 0/1:15.3549:14:1:38:13:488:-10,0,-0.731708 0/1:99:9:5:190:4:151:-10,0,-10 0/0:16.5069:10:10:331:0:0:0,-3.0103,-10 0/1:17.93:13:1:38:12:448:-10,0,-1.00055 0/0:40.5893:18:18:682:0:0:0,-5.41854,-10 scaffold_181 671171 . A G 2381.81 . AB=0;ABP=0;AC=10;AF=0.0543478;AN=184;AO=90;CIGAR=1X;DP=1241;DPB=1241;DPRA=1.36056;EPP=3.0103;EPPR=3.84374;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.98;NS=92;NUMALT=1;ODDS=11.8446;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3352;QR=42022;RO=1149;RPP=189.853;RPPR=2386.39;RUN=1;SAF=46;SAP=3.10681;SAR=44;SRF=577;SRP=3.05755;SRR=572;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:91.6553:11:11:398:0:0:0,-3.31133,-10 0/0:76.6042:6:6:203:0:0:0,-1.80618,-10 0/0:99:15:15:535:0:0:0,-4.51545,-10 0/0:76.6042:6:6:228:0:0:0,-1.80618,-10 0/0:88.6452:10:10:380:0:0:0,-3.0103,-10 0/0:82.6247:8:8:297:0:0:0,-2.40824,-10 0/0:99:23:23:809:0:0:0,-6.92369,-10 0/0:85.635:9:9:309:0:0:0,-2.70927,-10 0/0:99:14:14:524:0:0:0,-4.21442,-10 0/0:73.5939:5:5:187:0:0:0,-1.50515,-10 0/0:94.6653:12:12:449:0:0:0,-3.61236,-10 0/0:79.6144:7:7:266:0:0:0,-2.10721,-10 0/0:99:20:19:682:0:0:0,-5.71957,-10 0/0:99:35:35:1267:0:0:0,-10,-10 0/0:99:21:21:746:0:0:0,-6.32163,-10 0/0:99:15:15:539:0:0:0,-4.51545,-10 0/0:94.6653:12:12:444:0:0:0,-3.61236,-10 0/0:76.6042:6:6:222:0:0:0,-1.80618,-10 0/0:99:17:17:625:0:0:0,-5.11751,-10 0/0:99:21:21:721:0:0:0,-6.32163,-10 0/0:99:14:14:528:0:0:0,-4.21442,-10 0/0:91.6553:11:11:416:0:0:0,-3.31133,-10 0/0:76.6042:6:6:211:0:0:0,-1.80618,-10 0/0:99:18:18:639:0:0:0,-5.41854,-10 0/0:91.6553:11:11:398:0:0:0,-3.31133,-10 0/0:99:23:23:846:0:0:0,-6.92369,-10 0/0:99:14:14:505:0:0:0,-4.21442,-10 0/0:82.6247:8:8:299:0:0:0,-2.40824,-10 0/0:88.6452:10:10:370:0:0:0,-3.0103,-10 0/0:99:24:24:890:0:0:0,-7.22472,-10 0/0:64.562:2:2:76:0:0:0,-0.60206,-7.22 0/0:76.6042:6:6:209:0:0:0,-1.80618,-10 0/0:82.6247:8:8:304:0:0:0,-2.40824,-10 0/0:82.6247:8:8:258:0:0:0,-2.40824,-10 0/0:91.6553:11:11:384:0:0:0,-3.31133,-10 0/0:88.6452:10:10:377:0:0:0,-3.0103,-10 0/0:91.6553:11:11:416:0:0:0,-3.31133,-10 0/0:99:21:21:787:0:0:0,-6.32163,-10 0/0:88.6452:10:10:313:0:0:0,-3.0103,-10 0/0:97.6749:13:13:481:0:0:0,-3.91339,-10 0/0:99:15:15:561:0:0:0,-4.51545,-10 0/0:99:14:14:530:0:0:0,-4.21442,-10 0/0:94.6653:12:12:451:0:0:0,-3.61236,-10 0/0:99:23:23:845:0:0:0,-6.92369,-10 0/0:85.635:9:9:298:0:0:0,-2.70927,-10 0/0:91.6553:11:11:392:0:0:0,-3.31133,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:99:15:15:554:0:0:0,-4.51545,-10 0/0:88.6452:10:10:372:0:0:0,-3.0103,-10 0/0:99:25:25:838:0:0:0,-7.52575,-10 0/0:85.635:9:9:338:0:0:0,-2.70927,-10 0/0:99:23:23:862:0:0:0,-6.92369,-10 0/0:82.6247:8:8:296:0:0:0,-2.40824,-10 0/0:73.5939:5:5:188:0:0:0,-1.50515,-10 0/0:99:26:26:953:0:0:0,-7.82678,-10 0/0:99:17:17:644:0:0:0,-5.11751,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:79.6144:7:7:258:0:0:0,-2.10721,-10 0/0:99:14:14:512:0:0:0,-4.21442,-10 0/0:73.5939:5:5:186:0:0:0,-1.50515,-10 0/0:99:18:17:608:0:0:0,-5.11751,-10 0/0:85.635:9:9:337:0:0:0,-2.70927,-10 0/0:99:15:15:550:0:0:0,-4.51545,-10 0/0:91.6553:11:11:402:0:0:0,-3.31133,-10 0/0:67.5733:3:3:111:0:0:0,-0.90309,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:88.6452:10:10:380:0:0:0,-3.0103,-10 0/0:99:15:15:545:0:0:0,-4.51545,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 0/0:82.6247:8:8:275:0:0:0,-2.40824,-10 1/1:51.4405:11:0:0:11:405:-10,-3.31133,0 1/1:84.5537:22:0:0:22:823:-10,-6.62266,0 1/1:96.5939:26:0:0:26:968:-10,-7.82678,0 1/1:66.492:16:0:0:16:604:-10,-4.81648,0 1/1:63.4817:15:0:0:15:552:-10,-4.51545,0 0/0:85.635:9:9:295:0:0:0,-2.70927,-10 0/0:99:15:15:565:0:0:0,-4.51545,-10 0/0:73.5939:5:5:190:0:0:0,-1.50515,-10 0/0:70.5836:4:4:151:0:0:0,-1.20412,-10 0/0:79.6144:7:7:259:0:0:0,-2.10721,-10 0/0:99:31:31:1172:0:0:0,-9.33193,-10 0/0:99:20:20:759:0:0:0,-6.0206,-10 0/0:99:16:16:597:0:0:0,-4.81648,-10 0/0:82.6247:8:8:299:0:0:0,-2.40824,-10 0/0:99:14:14:517:0:0:0,-4.21442,-10 0/0:73.5939:5:5:190:0:0:0,-1.50515,-10 0/0:70.5836:4:4:152:0:0:0,-1.20412,-10 0/0:88.6452:10:10:376:0:0:0,-3.0103,-10 0/0:82.6247:8:8:304:0:0:0,-2.40824,-10 0/0:82.6247:8:8:300:0:0:0,-2.40824,-10 0/0:79.6144:7:7:262:0:0:0,-2.10721,-10 0/0:94.6653:12:12:448:0:0:0,-3.61236,-10 scaffold_181 671219 . C T 558.232 . AB=0.766667;ABP=21.5402;AC=2;AF=0.0108696;AN=184;AO=24;CIGAR=1X;DP=1244;DPB=1244;DPRA=1.01108;EPP=3.37221;EPPR=3.15459;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9672;NS=92;NUMALT=1;ODDS=2.43408;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=888;QR=43994;RO=1219;RPP=55.1256;RPPR=2598.18;RUN=1;SAF=11;SAP=3.37221;SAR=13;SRF=599;SRP=3.79588;SRR=620;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.0772:11:11:393:0:0:0,-3.31133,-10 0/0:30.0257:6:6:207:0:0:0,-1.80618,-10 0/0:57.1184:15:15:566:0:0:0,-4.51545,-10 0/0:30.0257:6:6:218:0:0:0,-1.80618,-10 0/0:42.0669:10:10:376:0:0:0,-3.0103,-10 0/0:36.0463:8:8:304:0:0:0,-2.40824,-10 0/0:84.2111:24:24:858:0:0:0,-7.22472,-10 0/0:39.0566:9:9:289:0:0:0,-2.70927,-10 0/0:54.1081:14:14:496:0:0:0,-4.21442,-10 0/0:27.0154:5:5:178:0:0:0,-1.50515,-10 0/0:48.0875:12:12:434:0:0:0,-3.61236,-10 0/0:33.036:7:7:262:0:0:0,-2.10721,-10 0/0:69.1596:19:19:647:0:0:0,-5.71957,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:75.1801:21:21:731:0:0:0,-6.32163,-10 0/0:57.1184:15:15:538:0:0:0,-4.51545,-10 0/0:48.0875:12:12:454:0:0:0,-3.61236,-10 0/0:30.0257:6:6:202:0:0:0,-1.80618,-10 0/0:63.139:17:17:637:0:0:0,-5.11751,-10 0/0:78.1904:22:22:773:0:0:0,-6.62266,-10 0/0:54.1081:14:14:504:0:0:0,-4.21442,-10 0/0:45.0772:11:11:409:0:0:0,-3.31133,-10 0/0:30.0257:6:6:223:0:0:0,-1.80618,-10 0/0:66.1493:18:18:668:0:0:0,-5.41854,-10 0/0:48.0875:12:12:398:0:0:0,-3.61236,-10 0/0:81.2007:23:23:815:0:0:0,-6.92369,-10 0/0:54.1081:14:14:519:0:0:0,-4.21442,-10 0/0:36.0463:8:8:291:0:0:0,-2.40824,-10 0/0:42.0669:10:10:380:0:0:0,-3.0103,-10 0/0:75.1801:22:21:779:0:0:0,-6.32163,-10 0/0:17.9845:2:2:76:0:0:0,-0.60206,-7.22 0/0:30.0257:6:6:182:0:0:0,-1.80618,-10 0/0:36.0463:8:8:294:0:0:0,-2.40824,-10 0/0:33.036:7:7:229:0:0:0,-2.10721,-10 0/0:45.0772:11:11:388:0:0:0,-3.31133,-10 0/0:42.0669:10:10:375:0:0:0,-3.0103,-10 0/0:45.0772:11:11:404:0:0:0,-3.31133,-10 0/0:75.1801:21:21:765:0:0:0,-6.32163,-10 0/0:42.0669:10:10:370:0:0:0,-3.0103,-10 0/1:99:13:7:251:6:228:-10,0,-10 0/0:60.1287:16:16:606:0:0:0,-4.81648,-10 0/0:54.1081:14:14:518:0:0:0,-4.21442,-10 0/0:48.0875:12:12:432:0:0:0,-3.61236,-10 0/0:78.1904:22:22:787:0:0:0,-6.62266,-10 0/0:39.0566:9:9:281:0:0:0,-2.70927,-10 0/0:42.0669:10:10:364:0:0:0,-3.0103,-10 0/0:99:39:39:1363:0:0:0,-10,-10 0/0:57.1184:15:15:519:0:0:0,-4.51545,-10 0/0:42.0669:10:10:373:0:0:0,-3.0103,-10 0/0:87.2212:25:25:866:0:0:0,-7.52575,-10 0/0:42.0669:10:10:379:0:0:0,-3.0103,-10 0/0:81.2007:23:23:817:0:0:0,-6.92369,-10 0/0:36.0463:8:8:303:0:0:0,-2.40824,-10 0/0:27.0154:5:5:190:0:0:0,-1.50515,-10 0/0:90.2313:26:26:893:0:0:0,-7.82678,-10 0/1:0.343041:17:0:0:17:645:-10,-5.11751,0 0/0:99:31:31:1119:0:0:0,-9.33193,-10 0/0:33.036:7:7:261:0:0:0,-2.10721,-10 0/0:54.1081:14:14:524:0:0:0,-4.21442,-10 0/0:27.0154:5:5:178:0:0:0,-1.50515,-10 0/0:66.1493:18:18:622:0:0:0,-5.41854,-10 0/0:39.0566:9:9:340:0:0:0,-2.70927,-10 0/0:54.1081:14:14:509:0:0:0,-4.21442,-10 0/0:48.0875:12:12:449:0:0:0,-3.61236,-10 0/0:20.9948:3:3:114:0:0:0,-0.90309,-10 0/0:87.2212:25:25:939:0:0:0,-7.52575,-10 0/0:42.0669:10:10:341:0:0:0,-3.0103,-10 0/0:54.1081:14:14:515:0:0:0,-4.21442,-10 0/0:99:29:29:1007:0:0:0,-8.72987,-10 0/0:36.0463:8:8:253:0:0:0,-2.40824,-10 0/0:22.6521:11:10:352:1:15:0,-0.769937,-10 0/0:78.1904:22:22:785:0:0:0,-6.62266,-10 0/0:90.2313:26:26:927:0:0:0,-7.82678,-10 0/0:63.139:17:17:634:0:0:0,-5.11751,-10 0/0:54.1081:14:14:506:0:0:0,-4.21442,-10 0/0:39.0566:9:9:332:0:0:0,-2.70927,-10 0/0:60.1287:16:16:605:0:0:0,-4.81648,-10 0/0:27.0154:5:5:190:0:0:0,-1.50515,-10 0/0:24.0051:4:4:137:0:0:0,-1.20412,-10 0/0:33.036:7:7:265:0:0:0,-2.10721,-10 0/0:99:31:31:1151:0:0:0,-9.33193,-10 0/0:69.1596:19:19:705:0:0:0,-5.71957,-10 0/0:60.1287:16:16:583:0:0:0,-4.81648,-10 0/0:39.0566:9:9:333:0:0:0,-2.70927,-10 0/0:51.0978:13:13:494:0:0:0,-3.91339,-10 0/0:27.0154:5:5:184:0:0:0,-1.50515,-10 0/0:24.0051:4:4:152:0:0:0,-1.20412,-10 0/0:42.0669:10:10:370:0:0:0,-3.0103,-10 0/0:36.0463:8:8:294:0:0:0,-2.40824,-10 0/0:36.0463:8:8:293:0:0:0,-2.40824,-10 0/0:33.036:7:7:265:0:0:0,-2.10721,-10 0/0:48.0875:12:12:429:0:0:0,-3.61236,-10 scaffold_181 928789 . A G 403.432 . AB=0.62069;ABP=6.67934;AC=2;AF=0.0108696;AN=184;AO=18;CIGAR=1X;DP=1008;DPB=1008;DPRA=1.33299;EPP=4.9405;EPPR=3.57295;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9919;NS=92;NUMALT=1;ODDS=4.05891;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=637;QR=35981;RO=988;RPP=42.0968;RPPR=2148.43;RUN=1;SAF=7;SAP=4.9405;SAR=11;SRF=502;SRP=3.57295;SRR=486;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.049:11:11:409:0:0:0,-3.31133,-10 0/0:42.0284:9:9:331:0:0:0,-2.70927,-10 0/0:72.1314:19:19:700:0:0:0,-5.71957,-10 0/0:39.0181:8:8:299:0:0:0,-2.40824,-10 0/0:63.1005:16:16:590:0:0:0,-4.81648,-10 0/0:26.9769:4:4:150:0:0:0,-1.20412,-10 0/0:63.1005:16:16:602:0:0:0,-4.81648,-10 0/0:60.0902:15:15:539:0:0:0,-4.51545,-10 0/0:39.0181:8:8:304:0:0:0,-2.40824,-10 0/0:17.946:1:1:38:0:0:0,-0.30103,-3.8 0/0:17.946:1:1:38:0:0:0,-0.30103,-3.8 0/0:36.0078:7:7:257:0:0:0,-2.10721,-10 0/0:78.152:21:21:749:0:0:0,-6.32163,-10 0/0:81.1623:22:22:795:0:0:0,-6.62266,-10 0/0:66.1108:17:17:627:0:0:0,-5.11751,-10 0/0:81.1623:22:22:786:0:0:0,-6.62266,-10 0/0:51.0593:12:12:434:0:0:0,-3.61236,-10 0/0:29.9872:5:5:184:0:0:0,-1.50515,-10 0/0:45.0387:10:10:376:0:0:0,-3.0103,-10 0/0:87.1829:24:24:868:0:0:0,-7.22472,-10 0/0:54.0696:13:13:418:0:0:0,-3.91339,-10 0/0:51.0593:12:12:432:0:0:0,-3.61236,-10 0/0:39.0181:8:8:291:0:0:0,-2.40824,-10 0/0:66.1108:17:17:634:0:0:0,-5.11751,-10 0/0:54.0696:13:13:434:0:0:0,-3.91339,-10 0/0:54.0696:13:13:479:0:0:0,-3.91339,-10 0/0:39.0181:8:8:276:0:0:0,-2.40824,-10 0/0:32.9975:6:6:227:0:0:0,-1.80618,-10 0/0:32.9975:6:6:213:0:0:0,-1.80618,-10 0/0:54.0696:13:13:493:0:0:0,-3.91339,-10 0/0:23.9666:3:3:114:0:0:0,-0.90309,-10 0/0:29.9872:5:5:161:0:0:0,-1.50515,-10 0/0:32.9975:6:6:206:0:0:0,-1.80618,-10 0/0:39.0181:8:8:303:0:0:0,-2.40824,-10 0/0:39.0181:8:8:302:0:0:0,-2.40824,-10 0/0:26.9769:4:4:139:0:0:0,-1.20412,-10 0/0:29.9872:5:5:174:0:0:0,-1.50515,-10 0/0:96.2134:27:27:1023:0:0:0,-8.12781,-10 0/0:36.0078:7:7:265:0:0:0,-2.10721,-10 0/0:36.0078:7:7:229:0:0:0,-2.10721,-10 0/0:48.049:11:11:416:0:0:0,-3.31133,-10 0/0:42.0284:9:9:341:0:0:0,-2.70927,-10 0/0:39.0181:8:8:294:0:0:0,-2.40824,-10 0/0:60.0902:15:15:539:0:0:0,-4.51545,-10 0/0:42.0284:9:9:340:0:0:0,-2.70927,-10 0/0:60.0902:15:15:556:0:0:0,-4.51545,-10 0/0:75.1417:21:20:715:0:0:0,-6.0206,-10 0/0:42.0284:10:9:342:0:0:0,-2.70927,-10 0/0:23.9666:3:3:110:0:0:0,-0.90309,-10 0/0:72.1314:19:19:693:0:0:0,-5.71957,-10 0/0:42.0284:9:9:334:0:0:0,-2.70927,-10 0/0:72.1314:19:19:713:0:0:0,-5.71957,-10 0/0:48.049:11:11:392:0:0:0,-3.31133,-10 0/0:23.9666:3:3:113:0:0:0,-0.90309,-10 0/0:66.1108:17:17:637:0:0:0,-5.11751,-10 0/0:26.9769:4:4:143:0:0:0,-1.20412,-10 0/0:39.0181:8:8:303:0:0:0,-2.40824,-10 0/0:39.0181:8:8:300:0:0:0,-2.40824,-10 0/0:48.049:11:11:390:0:0:0,-3.31133,-10 0/0:32.9975:6:6:224:0:0:0,-1.80618,-10 0/0:54.0696:13:13:490:0:0:0,-3.91339,-10 0/0:42.0284:9:9:340:0:0:0,-2.70927,-10 0/0:60.0902:15:15:569:0:0:0,-4.51545,-10 0/0:42.0284:9:9:342:0:0:0,-2.70927,-10 0/0:51.0593:12:12:443:0:0:0,-3.61236,-10 0/0:51.0593:12:12:445:0:0:0,-3.61236,-10 0/0:60.0902:15:15:518:0:0:0,-4.51545,-10 0/0:32.9975:6:6:228:0:0:0,-1.80618,-10 0/0:87.1829:24:24:886:0:0:0,-7.22472,-10 0/0:54.0696:13:13:438:0:0:0,-3.91339,-10 0/0:32.9975:6:6:228:0:0:0,-1.80618,-10 0/0:63.1005:16:16:606:0:0:0,-4.81648,-10 0/0:39.0181:8:8:272:0:0:0,-2.40824,-10 0/0:45.0387:10:10:356:0:0:0,-3.0103,-10 0/0:57.0799:14:14:501:0:0:0,-4.21442,-10 0/0:39.0181:8:8:260:0:0:0,-2.40824,-10 0/0:39.0181:8:8:281:0:0:0,-2.40824,-10 0/0:32.9975:6:6:228:0:0:0,-1.80618,-10 0/0:26.9769:4:4:142:0:0:0,-1.20412,-10 0/0:23.9666:3:3:105:0:0:0,-0.90309,-9.8 0/0:78.152:21:21:738:0:0:0,-6.32163,-10 0/1:99:18:6:196:12:410:-10,0,-10 0/0:48.049:11:11:373:0:0:0,-3.31133,-10 0/1:99:11:5:186:6:227:-10,0,-10 0/0:57.0799:14:14:507:0:0:0,-4.21442,-10 0/0:23.9666:3:3:114:0:0:0,-0.90309,-10 0/0:51.0593:12:12:451:0:0:0,-3.61236,-10 0/0:29.9872:5:5:168:0:0:0,-1.50515,-10 0/0:42.0284:9:9:337:0:0:0,-2.70927,-10 0/0:57.0799:14:14:502:0:0:0,-4.21442,-10 0/0:60.0902:15:15:539:0:0:0,-4.51545,-10 0/0:48.049:11:11:408:0:0:0,-3.31133,-10 scaffold_181 1048198 . G C 1835.72 . AB=0.565217;ABP=6.40913;AC=5;AF=0.0277778;AN=180;AO=70;CIGAR=1X;DP=2120;DPB=2120;DPRA=1.17662;EPP=3.50664;EPPR=3.31687;GTI=1;LEN=1;MEANALT=1;MQM=59.5;MQMR=59.9433;NS=90;NUMALT=1;ODDS=1.41589;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2555;QR=74759;RO=2047;RPP=155.013;RPPR=4448.01;RUN=1;SAF=37;SAP=3.50664;SAR=33;SRF=1032;SRP=3.31687;SRR=1015;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:88.3316:25:25:916:0:0:0,-7.52575,-10 .:.:.:.:.:.:.:. 0/0:67.2602:18:18:608:0:0:0,-5.41854,-10 0/0:52.2087:13:13:490:0:0:0,-3.91339,-10 0/0:43.1778:10:10:350:0:0:0,-3.0103,-10 0/0:28.1263:5:5:190:0:0:0,-1.50515,-10 0/0:99:50:49:1781:0:0:0,-10,-10 0/0:99:43:42:1533:0:0:0,-10,-10 0/0:76.2911:21:21:779:0:0:0,-6.32163,-10 0/0:22.1057:3:3:114:0:0:0,-0.90309,-10 0/0:46.1881:11:11:400:0:0:0,-3.31133,-10 0/0:25.116:4:4:152:0:0:0,-1.20412,-10 0/0:99:36:36:1292:0:0:0,-10,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:91.3426:26:26:968:0:0:0,-7.82678,-10 0/0:79.3013:22:22:803:0:0:0,-6.62266,-10 0/0:99:29:29:1033:0:0:0,-8.72987,-10 0/0:55.219:14:14:476:0:0:0,-4.21442,-10 0/0:99:32:32:1118:0:0:0,-9.63296,-10 0/0:99:31:31:1084:0:0:0,-9.33193,-10 0/0:99:30:30:1077:0:0:0,-9.0309,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:34.1469:7:7:265:0:0:0,-2.10721,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:99:30:30:1066:0:0:0,-9.0309,-10 0/0:99:30:30:1054:0:0:0,-9.0309,-10 0/0:70.2704:19:19:719:0:0:0,-5.71957,-10 0/0:64.2499:17:17:607:0:0:0,-5.11751,-10 0/0:61.2396:16:16:598:0:0:0,-4.81648,-10 0/0:99:38:38:1326:0:0:0,-10,-10 0/0:43.1778:10:10:375:0:0:0,-3.0103,-10 0/0:43.1778:10:10:363:0:0:0,-3.0103,-10 0/0:67.2602:18:18:633:0:0:0,-5.41854,-10 0/0:55.219:14:14:499:0:0:0,-4.21442,-10 0/0:82.3115:23:23:849:0:0:0,-6.92369,-10 0/0:55.219:14:14:513:0:0:0,-4.21442,-10 0/0:58.2293:15:15:533:0:0:0,-4.51545,-10 0/0:99:38:38:1401:0:0:0,-10,-10 0/0:91.3426:26:26:963:0:0:0,-7.82678,-10 0/0:64.2499:17:17:643:0:0:0,-5.11751,-10 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:67.2602:18:18:658:0:0:0,-5.41854,-10 0/0:91.3426:26:26:902:0:0:0,-7.82678,-10 0/0:99:44:44:1624:0:0:0,-10,-10 0/0:99:29:29:1045:0:0:0,-8.72987,-10 0/0:55.219:14:14:524:0:0:0,-4.21442,-10 0/0:99:55:55:2003:0:0:0,-10,-10 0/0:91.3426:27:26:942:0:0:0,-7.82678,-10 0/0:73.2808:20:20:726:0:0:0,-6.0206,-10 0/0:99:37:37:1372:0:0:0,-10,-10 0/0:49.1984:12:12:445:0:0:0,-3.61236,-10 0/0:99:46:46:1743:0:0:0,-10,-10 0/0:61.2396:16:16:600:0:0:0,-4.81648,-10 0/0:46.1881:11:11:413:0:0:0,-3.31133,-10 0/0:99:50:50:1827:0:0:0,-10,-10 0/0:76.2911:21:21:773:0:0:0,-6.32163,-10 0/0:88.3316:25:25:917:0:0:0,-7.52575,-10 0/0:43.1778:10:10:363:0:0:0,-3.0103,-10 0/0:85.3216:24:24:824:0:0:0,-7.22472,-10 0/0:61.2396:16:16:579:0:0:0,-4.81648,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:99:29:29:1085:0:0:0,-8.72987,-10 0/0:99:43:43:1595:0:0:0,-10,-10 0/0:82.3115:23:23:805:0:0:0,-6.92369,-10 0/0:46.1881:11:11:370:0:0:0,-3.31133,-10 0/0:97.3578:28:28:1050:0:0:0,-8.42884,-10 0/0:67.2602:18:18:669:0:0:0,-5.41854,-10 0/0:67.2602:18:18:660:0:0:0,-5.41854,-10 0/1:99:48:26:960:22:793:-10,0,-10 0/1:0.151407:13:0:0:13:475:-10,-3.91339,0 0/0:85.3216:24:24:871:0:0:0,-7.22472,-10 0/0:99:44:44:1619:0:0:0,-10,-10 0/0:85.3216:24:24:890:0:0:0,-7.22472,-10 0/0:79.3013:22:22:824:0:0:0,-6.62266,-10 0/0:88.3316:25:25:945:0:0:0,-7.52575,-10 1/1:7.32608:18:0:0:18:650:-10,-5.41854,0 0/0:82.3115:23:23:815:0:0:0,-6.92369,-10 0/0:49.1984:12:12:433:0:0:0,-3.61236,-10 0/0:52.2087:13:13:479:0:0:0,-3.91339,-10 0/0:73.2808:20:20:734:0:0:0,-6.0206,-10 0/0:99:39:39:1442:0:0:0,-10,-10 0/0:99:41:41:1494:0:0:0,-10,-10 0/0:91.3426:26:26:952:0:0:0,-7.82678,-10 0/0:70.2704:19:19:705:0:0:0,-5.71957,-10 0/1:99:31:14:531:17:637:-10,0,-10 0/0:34.1469:7:7:252:0:0:0,-2.10721,-10 0/0:88.3316:25:25:944:0:0:0,-7.52575,-10 0/0:85.3216:24:24:911:0:0:0,-7.22472,-10 0/0:25.116:4:4:152:0:0:0,-1.20412,-10 0/0:52.2087:13:13:485:0:0:0,-3.91339,-10 0/0:25.116:4:4:147:0:0:0,-1.20412,-10 .:.:.:.:.:.:.:. scaffold_181 1063749 . G A 92.842 . AB=0.333333;ABP=7.35324;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1X;DP=1784;DPB=1784;DPRA=0.92752;EPP=8.80089;EPPR=3.24967;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9792;NS=92;NUMALT=1;ODDS=13.5712;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=215;QR=64751;RO=1778;RPP=16.0391;RPPR=3837.87;RUN=1;SAF=5;SAP=8.80089;SAR=1;SRF=885;SRP=3.08846;SRR=893;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:21:21:740:0:0:0,-6.32163,-10 0/0:95.0627:15:15:541:0:0:0,-4.51545,-10 0/0:99:27:27:956:0:0:0,-8.12781,-10 0/0:83.021:11:11:409:0:0:0,-3.31133,-10 0/0:92.0523:14:14:497:0:0:0,-4.21442,-10 0/0:73.9903:8:8:293:0:0:0,-2.40824,-10 0/0:99:34:34:1272:0:0:0,-10,-10 0/0:99:18:18:673:0:0:0,-5.41854,-10 0/0:89.0419:13:13:465:0:0:0,-3.91339,-10 0/0:67.9697:6:6:228:0:0:0,-1.80618,-10 0/0:61.9491:4:4:152:0:0:0,-1.20412,-10 0/0:83.021:11:11:407:0:0:0,-3.31133,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:99:35:35:1225:0:0:0,-10,-10 0/0:99:27:27:932:0:0:0,-8.12781,-10 0/0:99:33:33:1219:0:0:0,-9.93399,-10 0/0:99:22:22:794:0:0:0,-6.62266,-10 0/0:73.9903:8:8:294:0:0:0,-2.40824,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:99:30:30:1099:0:0:0,-9.0309,-10 0/0:80.0108:10:10:355:0:0:0,-3.0103,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:58.9388:3:3:114:0:0:0,-0.90309,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:99:19:19:709:0:0:0,-5.71957,-10 0/0:99:19:19:687:0:0:0,-5.71957,-10 0/0:99:17:17:624:0:0:0,-5.11751,-10 0/0:92.0523:14:14:514:0:0:0,-4.21442,-10 0/0:99:25:25:948:0:0:0,-7.52575,-10 0/0:99:39:39:1391:0:0:0,-10,-10 0/0:64.9594:5:5:183:0:0:0,-1.50515,-10 0/0:67.9697:6:6:223:0:0:0,-1.80618,-10 0/0:99:22:22:811:0:0:0,-6.62266,-10 0/0:89.0419:13:13:491:0:0:0,-3.91339,-10 0/0:99:18:18:658:0:0:0,-5.41854,-10 0/0:77.0006:9:9:335:0:0:0,-2.70927,-10 0/0:99:18:18:646:0:0:0,-5.41854,-10 0/0:99:31:31:1121:0:0:0,-9.33193,-10 0/0:89.0419:13:13:464:0:0:0,-3.91339,-10 0/0:83.021:11:11:395:0:0:0,-3.31133,-10 0/0:99:37:37:1338:0:0:0,-10,-10 0/0:99:21:21:787:0:0:0,-6.32163,-10 0/0:83.021:11:11:395:0:0:0,-3.31133,-10 0/0:99:30:30:1110:0:0:0,-9.0309,-10 0/0:99:24:24:879:0:0:0,-7.22472,-10 0/0:83.021:11:11:389:0:0:0,-3.31133,-10 0/0:99:43:43:1579:0:0:0,-10,-10 0/0:99:37:37:1345:0:0:0,-10,-10 0/0:86.0312:12:12:456:0:0:0,-3.61236,-10 0/0:99:41:41:1491:0:0:0,-10,-10 0/0:99:17:17:592:0:0:0,-5.11751,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:99:18:18:670:0:0:0,-5.41854,-10 0/0:77.0006:9:9:333:0:0:0,-2.70927,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:99:19:19:699:0:0:0,-5.71957,-10 0/0:99:23:23:863:0:0:0,-6.92369,-10 0/0:83.021:11:11:411:0:0:0,-3.31133,-10 0/0:98.067:16:16:603:0:0:0,-4.81648,-10 0/0:83.021:11:11:382:0:0:0,-3.31133,-10 0/1:92.8422:18:12:453:6:215:-10,0,-10 0/0:89.0419:13:13:457:0:0:0,-3.91339,-10 0/0:99:30:30:1055:0:0:0,-9.0309,-10 0/0:99:23:23:836:0:0:0,-6.92369,-10 0/0:99:19:19:684:0:0:0,-5.71957,-10 0/0:99:33:33:1194:0:0:0,-9.93399,-10 0/0:99:21:21:726:0:0:0,-6.32163,-10 0/0:80.0108:10:10:326:0:0:0,-3.0103,-10 0/0:99:34:34:1229:0:0:0,-10,-10 0/0:83.021:11:11:408:0:0:0,-3.31133,-10 0/0:86.0312:12:12:454:0:0:0,-3.61236,-10 0/0:99:51:51:1822:0:0:0,-10,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:73.9903:8:8:299:0:0:0,-2.40824,-10 0/0:99:29:29:1032:0:0:0,-8.72987,-10 0/0:70.98:7:7:266:0:0:0,-2.10721,-10 0/0:83.021:11:11:400:0:0:0,-3.31133,-10 0/0:89.0419:13:13:494:0:0:0,-3.91339,-10 0/0:61.9491:4:4:140:0:0:0,-1.20412,-10 0/0:70.98:7:7:260:0:0:0,-2.10721,-10 0/0:99:27:27:977:0:0:0,-8.12781,-10 0/0:99:40:40:1423:0:0:0,-10,-10 0/0:92.0523:14:14:498:0:0:0,-4.21442,-10 0/0:99:17:17:641:0:0:0,-5.11751,-10 0/0:99:26:26:945:0:0:0,-7.82678,-10 0/0:80.0108:10:10:373:0:0:0,-3.0103,-10 0/0:86.0312:12:12:405:0:0:0,-3.61236,-10 0/0:80.0108:10:10:369:0:0:0,-3.0103,-10 0/0:80.0108:10:10:380:0:0:0,-3.0103,-10 0/0:99:19:19:685:0:0:0,-5.71957,-10 0/0:86.0312:12:12:431:0:0:0,-3.61236,-10 0/0:83.021:11:11:417:0:0:0,-3.31133,-10 scaffold_181 1063783 . C G 3327.1 . AB=0.604651;ABP=19.3721;AC=13;AF=0.0706522;AN=184;AO=128;CIGAR=1X;DP=1774;DPB=1774;DPRA=0.914622;EPP=5.45321;EPPR=3.90319;GTI=3;LEN=1;MEANALT=1.09091;MQM=59.8672;MQMR=59.9878;NS=92;NUMALT=1;ODDS=0.23441;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4687;QR=60043;RO=1644;RPP=280.959;RPPR=3572.91;RUN=1;SAF=70;SAP=5.45321;SAR=58;SRF=809;SRP=3.90319;SRR=835;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:80.9955:21:21:733:0:0:0,-6.32163,-10 0/0:62.9338:15:15:553:0:0:0,-4.51545,-10 0/1:99:27:8:304:19:691:-10,0,-10 1/1:8.07275:11:0:0:11:393:-10,-3.31133,0 0/0:59.9235:14:14:524:0:0:0,-4.21442,-10 0/0:41.8617:8:8:282:0:0:0,-2.40824,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:71.9646:18:18:680:0:0:0,-5.41854,-10 0/0:56.9132:13:13:432:0:0:0,-3.91339,-10 0/0:35.8411:6:6:225:0:0:0,-1.80618,-10 0/0:29.8205:4:4:136:0:0:0,-1.20412,-10 0/0:50.8926:11:11:416:0:0:0,-3.31133,-10 0/0:99:33:33:1215:0:0:0,-9.93399,-10 0/0:99:35:35:1249:0:0:0,-10,-10 0/1:99:26:7:222:18:675:-10,0,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:84.0057:22:22:801:0:0:0,-6.62266,-10 0/0:41.8617:8:8:291:0:0:0,-2.40824,-10 0/0:96.0482:26:26:933:0:0:0,-7.82678,-10 0/0:99:30:30:1101:0:0:0,-9.0309,-10 0/0:47.8823:10:10:375:0:0:0,-3.0103,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:26.8102:3:3:111:0:0:0,-0.90309,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:74.9749:19:19:709:0:0:0,-5.71957,-10 0/0:74.9749:19:19:698:0:0:0,-5.71957,-10 0/0:68.9544:17:17:596:0:0:0,-5.11751,-10 0/0:59.9235:14:14:512:0:0:0,-4.21442,-10 0/0:93.0354:25:25:928:0:0:0,-7.52575,-10 0/0:99:39:39:1394:0:0:0,-10,-10 0/0:29.8205:5:4:152:0:0:0,-1.20412,-10 0/0:35.8411:6:6:228:0:0:0,-1.80618,-10 0/0:84.0057:22:22:827:0:0:0,-6.62266,-10 0/0:53.9029:12:12:445:0:0:0,-3.61236,-10 0/0:71.9646:18:18:665:0:0:0,-5.41854,-10 0/0:44.872:9:9:339:0:0:0,-2.70927,-10 0/0:71.9646:18:18:650:0:0:0,-5.41854,-10 0/0:99:31:31:1114:0:0:0,-9.33193,-10 0/0:56.9132:13:13:436:0:0:0,-3.91339,-10 0/0:50.8926:11:11:416:0:0:0,-3.31133,-10 0/0:99:37:37:1360:0:0:0,-10,-10 0/0:80.9955:21:21:793:0:0:0,-6.32163,-10 0/0:50.8926:11:11:409:0:0:0,-3.31133,-10 0/0:99:29:29:1039:0:0:0,-8.72987,-10 0/0:90.0258:24:24:887:0:0:0,-7.22472,-10 0/0:47.8823:10:10:365:0:0:0,-3.0103,-10 0/0:99:43:43:1563:0:0:0,-10,-10 0/0:99:37:37:1359:0:0:0,-10,-10 0/0:53.9029:12:12:425:0:0:0,-3.61236,-10 0/0:99:42:42:1550:0:0:0,-10,-10 0/0:68.9544:17:17:624:0:0:0,-5.11751,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:71.9646:18:18:672:0:0:0,-5.41854,-10 0/0:44.872:9:9:339:0:0:0,-2.70927,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:74.9749:19:19:718:0:0:0,-5.71957,-10 0/0:87.0158:23:23:852:0:0:0,-6.92369,-10 0/0:50.8926:11:11:397:0:0:0,-3.31133,-10 0/0:65.9441:16:16:607:0:0:0,-4.81648,-10 0/0:50.8926:11:11:380:0:0:0,-3.31133,-10 0/0:71.9646:18:18:669:0:0:0,-5.41854,-10 0/0:56.9132:13:13:487:0:0:0,-3.91339,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:87.0158:23:23:820:0:0:0,-6.92369,-10 0/0:74.9749:19:19:706:0:0:0,-5.71957,-10 0/0:99:33:33:1207:0:0:0,-9.93399,-10 0/0:80.9955:21:21:779:0:0:0,-6.32163,-10 0/0:47.8823:10:10:352:0:0:0,-3.0103,-10 0/0:99:34:34:1262:0:0:0,-10,-10 0/0:50.8926:11:11:404:0:0:0,-3.31133,-10 0/0:53.9029:12:12:414:0:0:0,-3.61236,-10 0/0:99:51:51:1833:0:0:0,-10,-10 0/0:77.9852:20:20:713:0:0:0,-6.0206,-10 0/0:41.8617:8:8:303:0:0:0,-2.40824,-10 0/0:99:29:29:1062:0:0:0,-8.72987,-10 0/0:38.8514:7:7:263:0:0:0,-2.10721,-10 0/0:50.8926:11:11:413:0:0:0,-3.31133,-10 1/1:14.0933:13:0:0:13:494:-10,-3.91339,0 0/1:0.0147423:4:0:0:4:150:-10,-1.20412,0 0/1:0.0592717:6:0:0:6:226:-10,-1.80618,0 0/1:1.84295:27:1:38:26:952:-10,-2.89645,0 0/1:99:38:29:1068:9:319:-10,0,-10 0/1:99:13:5:188:8:282:-10,0,-10 0/0:68.9544:17:17:631:0:0:0,-5.11751,-10 0/0:96.0482:26:26:919:0:0:0,-7.82678,-10 0/0:47.8823:10:10:350:0:0:0,-3.0103,-10 0/0:53.9029:12:12:455:0:0:0,-3.61236,-10 0/0:47.8823:10:10:357:0:0:0,-3.0103,-10 0/0:47.8823:10:10:377:0:0:0,-3.0103,-10 0/1:99:19:9:315:10:376:-10,0,-10 0/1:85.338:12:8:298:4:129:-10,0,-10 0/0:50.8926:11:11:390:0:0:0,-3.31133,-10 scaffold_181 1125480 . A G 3473.27 . AB=0.544444;ABP=6.09862;AC=13;AF=0.0706522;AN=184;AO=133;CIGAR=1X;DP=1288;DPB=1288;DPRA=1.47547;EPP=7.72876;EPPR=5.86988;GTI=0;LEN=1;MEANALT=1;MQM=59.9624;MQMR=59.929;NS=92;NUMALT=1;ODDS=0.720928;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4794;QR=42037;RO=1155;RPP=291.816;RPPR=2511.06;RUN=1;SAF=58;SAP=7.72876;SAR=75;SRF=558;SRP=5.86988;SRR=597;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.6696:14:14:514:0:0:0,-4.21442,-10 0/0:18.5769:5:5:183:0:0:0,-1.50515,-10 0/0:36.6387:11:11:389:0:0:0,-3.31133,-10 0/0:24.5975:7:7:265:0:0:0,-2.10721,-10 0/0:24.5975:7:7:229:0:0:0,-2.10721,-10 0/0:18.5769:5:5:181:0:0:0,-1.50515,-10 0/0:84.8034:27:27:994:0:0:0,-8.12781,-10 0/0:63.7314:20:20:715:0:0:0,-6.0206,-10 0/0:33.6284:10:10:309:0:0:0,-3.0103,-10 0/0:6.53566:1:1:38:0:0:0,-0.30103,-3.8 0/0:27.6078:8:8:302:0:0:0,-2.40824,-10 0/0:18.5769:5:5:190:0:0:0,-1.50515,-10 0/0:72.7623:23:23:837:0:0:0,-6.92369,-10 0/0:75.7726:24:24:853:0:0:0,-7.22472,-10 0/0:78.7829:25:25:941:0:0:0,-7.52575,-10 0/0:60.7211:19:19:692:0:0:0,-5.71957,-10 0/0:63.7314:20:20:743:0:0:0,-6.0206,-10 0/0:24.5975:7:7:266:0:0:0,-2.10721,-10 0/0:27.6078:8:8:303:0:0:0,-2.40824,-10 0/0:78.7829:25:25:905:0:0:0,-7.52575,-10 0/0:57.7108:18:18:641:0:0:0,-5.41854,-10 0/0:87.8137:28:28:1033:0:0:0,-8.42884,-10 0/0:12.5563:3:3:110:0:0:0,-0.90309,-10 0/0:60.7211:19:19:702:0:0:0,-5.71957,-10 0/0:24.5975:7:7:261:0:0:0,-2.10721,-10 0/1:99:10:5:190:5:187:-10,0,-10 0/0:51.6902:16:16:566:0:0:0,-4.81648,-10 0/0:18.5769:5:5:189:0:0:0,-1.50515,-10 0/0:51.6902:16:16:585:0:0:0,-4.81648,-10 0/0:57.7108:18:18:650:0:0:0,-5.41854,-10 0/0:21.5872:6:6:227:0:0:0,-1.80618,-10 0/0:45.6696:14:14:519:0:0:0,-4.21442,-10 0/0:54.7005:17:17:636:0:0:0,-5.11751,-10 0/0:21.5872:6:6:226:0:0:0,-1.80618,-10 0/0:45.6696:14:14:527:0:0:0,-4.21442,-10 0/0:30.6181:9:9:341:0:0:0,-2.70927,-10 0/0:36.6387:11:11:396:0:0:0,-3.31133,-10 0/0:69.752:22:22:792:0:0:0,-6.62266,-10 0/0:30.6181:9:9:341:0:0:0,-2.70927,-10 0/1:99:8:3:114:5:190:-10,0,-9.97995 0/0:54.7005:17:17:639:0:0:0,-5.11751,-10 0/0:39.649:12:12:442:0:0:0,-3.61236,-10 0/0:51.6902:16:16:565:0:0:0,-4.81648,-10 0/0:57.7108:18:18:613:0:0:0,-5.41854,-10 0/1:99:19:11:418:8:270:-10,0,-10 0/1:99:13:6:222:7:259:-10,0,-10 0/1:99:29:12:431:17:581:-10,0,-10 1/1:64.1493:25:0:0:25:930:-10,-7.52575,0 1/1:18.9948:10:0:0:10:351:-10,-3.0103,0 0/1:99:24:10:371:14:528:-10,0,-10 0/0:27.6078:8:8:298:0:0:0,-2.40824,-10 0/1:99:21:6:217:15:539:-10,0,-10 0/0:42.6593:13:13:486:0:0:0,-3.91339,-10 0/0:9.546:2:2:67:0:0:0,-0.60206,-6.365 0/1:99:33:19:667:14:497:-10,0,-10 0/0:30.6181:9:9:329:0:0:0,-2.70927,-10 0/1:99:23:10:310:13:462:-10,0,-10 0/0:30.6181:9:9:311:0:0:0,-2.70927,-10 0/0:39.649:12:12:433:0:0:0,-3.61236,-10 0/0:24.5975:7:7:262:0:0:0,-2.10721,-10 0/0:84.8034:27:27:987:0:0:0,-8.12781,-10 0/0:39.649:12:12:455:0:0:0,-3.61236,-10 0/0:93.8339:30:30:1099:0:0:0,-9.0309,-10 0/0:42.6593:13:13:491:0:0:0,-3.91339,-10 0/0:21.5872:6:6:192:0:0:0,-1.80618,-10 0/0:60.7211:19:19:667:0:0:0,-5.71957,-10 0/0:33.6284:10:10:380:0:0:0,-3.0103,-10 0/0:39.649:12:12:441:0:0:0,-3.61236,-10 0/0:45.6696:14:14:491:0:0:0,-4.21442,-10 0/0:33.6284:10:10:371:0:0:0,-3.0103,-10 0/0:39.649:12:12:434:0:0:0,-3.61236,-10 0/0:69.752:22:22:800:0:0:0,-6.62266,-10 0/0:30.6181:9:9:317:0:0:0,-2.70927,-10 0/0:33.6284:10:10:367:0:0:0,-3.0103,-10 0/0:54.7005:17:17:627:0:0:0,-5.11751,-10 0/0:24.5975:7:7:266:0:0:0,-2.10721,-10 0/0:21.5872:6:6:224:0:0:0,-1.80618,-10 0/0:54.7005:17:17:643:0:0:0,-5.11751,-10 0/0:18.5769:5:5:179:0:0:0,-1.50515,-10 0/0:33.6284:10:10:375:0:0:0,-3.0103,-10 0/0:75.7726:24:24:884:0:0:0,-7.22472,-10 0/0:54.7005:17:17:613:0:0:0,-5.11751,-10 0/0:60.7211:19:19:683:0:0:0,-5.71957,-10 0/0:54.7005:17:17:614:0:0:0,-5.11751,-10 0/0:33.6284:10:10:370:0:0:0,-3.0103,-10 0/0:24.5975:7:7:266:0:0:0,-2.10721,-10 0/0:51.6902:16:16:601:0:0:0,-4.81648,-10 0/0:33.6284:10:10:347:0:0:0,-3.0103,-10 0/0:21.5872:6:6:220:0:0:0,-1.80618,-10 0/0:57.7108:18:18:632:0:0:0,-5.41854,-10 0/0:48.6799:15:15:513:0:0:0,-4.51545,-10 0/0:45.6696:14:14:512:0:0:0,-4.21442,-10 scaffold_181 1156893 . AAGC A 706.652 . AB=0.622642;ABP=9.93443;AC=4;AF=0.0217391;AN=184;AO=33;CIGAR=1M3D4M;DP=1032;DPB=1023.75;DPRA=1.19101;EPP=74.6689;EPPR=2146.25;GTI=2;LEN=3;MEANALT=1;MQM=60;MQMR=59.9838;NS=92;NUMALT=1;ODDS=3.36722;PAIRED=0;PAIREDR=0;PAO=1.5;PQA=56.5;PQR=168.5;PRO=4.5;QA=1109;QR=35999;RO=987;RPP=3.60252;RPPR=3.0301;RUN=1;SAF=15;SAP=3.60252;SAR=18;SRF=495;SRP=3.0301;SRR=492;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:33.2929:7:7:264:0:0:0,-2.10721,-10 0|0:45.3341:12:11:399:0:0:0,-3.31133,-10 0|0:48.3444:12:12:438:0:0:0,-3.61236,-10 0|0:45.3341:11:11:400:0:0:0,-3.31133,-10 0|0:48.3444:12:12:441:0:0:0,-3.61236,-10 0|0:18.2414:2:2:76:0:0:0,-0.60206,-7.22 0|0:84.4679:24:24:857:0:0:0,-7.22472,-10 0|0:57.3753:15:15:550:0:0:0,-4.51545,-10 0|0:33.2929:7:7:257:0:0:0,-2.10721,-10 0|0:24.262:4:4:137:0:0:0,-1.20412,-10 0|0:21.2517:3:3:114:0:0:0,-0.90309,-10 0|0:24.262:4:4:145:0:0:0,-1.20412,-10 0|0:75.4371:21:21:760:0:0:0,-6.32163,-10 0|0:60.3856:18:16:585:0:0:0,-4.81648,-10 0|0:87.4781:25:25:918:0:0:0,-7.52575,-10 0|0:51.3547:13:13:475:0:0:0,-3.91339,-10 0|0:45.3341:12:11:409:0:0:0,-3.31133,-10 0|0:27.2723:6:5:177:0:0:0,-1.50515,-10 0|0:48.3444:12:12:440:0:0:0,-3.61236,-10 0|0:60.3856:17:16:576:0:0:0,-4.81648,-10 0|0:48.3444:12:12:444:0:0:0,-3.61236,-10 0|0:63.3959:17:17:635:0:0:0,-5.11751,-10 0|0:21.2517:3:3:108:0:0:0,-0.90309,-10 0|0:45.3341:11:11:412:0:0:0,-3.31133,-10 0|0:42.3238:10:10:359:0:0:0,-3.0103,-10 0|0:39.3135:9:9:316:0:0:0,-2.70927,-10 0|0:36.3032:8:8:296:0:0:0,-2.40824,-10 0|0:27.2723:5:5:171:0:0:0,-1.50515,-10 0|0:27.2723:6:5:174:0:0:0,-1.50515,-10 0|0:78.4474:22:22:797:0:0:0,-6.62266,-10 0|0:18.2414:2:2:75:0:0:0,-0.60206,-7.125 0|0:30.2826:6:6:207:0:0:0,-1.80618,-10 0|0:51.3547:13:13:477:0:0:0,-3.91339,-10 0|0:27.2723:5:5:186:0:0:0,-1.50515,-10 0|0:48.3444:12:12:405:0:0:0,-3.61236,-10 0|0:39.3135:9:9:335:0:0:0,-2.70927,-10 0|0:36.3032:8:8:297:0:0:0,-2.40824,-10 0|0:39.3135:10:9:338:0:0:0,-2.70927,-10 0|0:42.3238:10:10:362:0:0:0,-3.0103,-10 0|0:39.3135:9:9:338:0:0:0,-2.70927,-10 0|0:69.4165:19:19:708:0:0:0,-5.71957,-10 0|0:45.3341:11:11:369:0:0:0,-3.31133,-10 0|0:30.2826:6:6:224:0:0:0,-1.80618,-10 0|0:45.3341:12:11:412:0:0:0,-3.31133,-10 0|0:45.3341:11:11:405:0:0:0,-3.31133,-10 0|0:33.2929:7:7:263:0:0:0,-2.10721,-10 0|0:63.3959:17:17:608:0:0:0,-5.11751,-10 0|0:66.4062:19:18:650:0:0:0,-5.41854,-10 0|0:24.262:4:4:140:0:0:0,-1.20412,-10 0|0:57.3753:15:15:537:0:0:0,-4.51545,-10 0|0:24.262:4:4:142:0:0:0,-1.20412,-10 0|0:54.365:14:14:517:0:0:0,-4.21442,-10 0|0:48.3444:12:12:430:0:0:0,-3.61236,-10 0|0:27.2723:5:5:187:0:0:0,-1.50515,-10 0|0:99:29:29:1055:0:0:0,-8.72987,-10 0|0:33.2929:7:7:263:0:0:0,-2.10721,-10 0|0:60.3856:16:16:574:0:0:0,-4.81648,-10 0|0:33.2929:7:7:266:0:0:0,-2.10721,-10 0|1:0.011582:9:0:0:9:301:-10,-2.70927,0 0|0:39.3135:9:9:339:0:0:0,-2.70927,-10 0|0:75.4371:21:21:760:0:0:0,-6.32163,-10 0|0:39.3135:10:9:330:0:0:0,-2.70927,-10 0|1:99:19:10:370:9:293:-10,0,-10 0|0:39.3135:9:9:336:0:0:0,-2.70927,-10 0|0:39.3135:9:9:318:0:0:0,-2.70927,-10 0|0:75.4371:21:21:772:0:0:0,-6.32163,-10 0|0:36.3032:8:8:303:0:0:0,-2.40824,-10 0|0:33.2929:7:7:257:0:0:0,-2.10721,-10 0|0:60.3856:16:16:579:0:0:0,-4.81648,-10 0|0:48.3444:12:12:447:0:0:0,-3.61236,-10 0|0:27.2723:5:5:181:0:0:0,-1.50515,-10 0|0:72.4268:20:20:725:0:0:0,-6.0206,-10 0|0:66.4062:18:18:667:0:0:0,-5.41854,-10 0|0:36.3032:8:8:294:0:0:0,-2.40824,-10 0|0:48.3444:12:12:446:0:0:0,-3.61236,-10 0|0:54.365:14:14:499:0:0:0,-4.21442,-10 0|1:0.00036147:4:0:0:4:152:-10,-1.20412,0 0|0:45.3341:12:11:409:0:0:0,-3.31133,-10 0|0:15.2311:1:1:37:0:0:0,-0.30103,-3.7 0|0:36.3032:8:8:302:0:0:0,-2.40824,-10 0|0:78.4474:22:22:802:0:0:0,-6.62266,-10 0|0:54.365:14:14:484:0:0:0,-4.21442,-10 0|1:99:21:10:368:11:363:-10,0,-10 0|0:51.3547:13:13:478:0:0:0,-3.91339,-10 0|0:45.3341:11:11:394:0:0:0,-3.31133,-10 0|0:18.2414:2:2:75:0:0:0,-0.60206,-7.125 0|0:36.3032:8:8:295:0:0:0,-2.40824,-10 0|0:45.3341:11:11:413:0:0:0,-3.31133,-10 0|0:24.262:4:4:134:0:0:0,-1.20412,-10 0|0:36.3032:8:8:293:0:0:0,-2.40824,-10 0|0:45.3341:11:11:406:0:0:0,-3.31133,-10 0|0:60.3856:16:16:586:0:0:0,-4.81648,-10 scaffold_181 1156918 . T C 972.717 . AB=0.5;ABP=3.0103;AC=5;AF=0.0271739;AN=184;AO=40;CIGAR=1X;DP=1035;DPB=1035;DPRA=1.45759;EPP=3.22745;EPPR=3.04525;GTI=1;LEN=1;MEANALT=1;MQM=59.6;MQMR=59.9809;NS=92;NUMALT=1;ODDS=3.29108;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1440;QR=36387;RO=994;RPP=89.8692;RPPR=2058.48;RUN=1;SAF=21;SAP=3.22745;SAR=19;SRF=489;SRP=3.56955;SRR=505;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:33.0103:7:7:266:0:0:0,-2.10721,-10 0/0:48.0618:12:12:409:0:0:0,-3.61236,-10 0/0:48.0618:12:12:447:0:0:0,-3.61236,-10 0/0:45.0515:11:11:387:0:0:0,-3.31133,-10 0/0:48.0618:12:12:442:0:0:0,-3.61236,-10 0/0:17.9588:2:2:76:0:0:0,-0.60206,-7.22 0/0:84.1853:24:24:874:0:0:0,-7.22472,-10 0/0:57.0927:15:15:545:0:0:0,-4.51545,-10 0/0:33.0103:7:7:261:0:0:0,-2.10721,-10 0/0:23.9794:4:4:139:0:0:0,-1.20412,-10 0/0:20.9691:3:3:113:0:0:0,-0.90309,-10 0/0:23.9794:4:4:145:0:0:0,-1.20412,-10 0/0:72.1442:20:20:720:0:0:0,-6.0206,-10 0/0:66.1236:18:18:634:0:0:0,-5.41854,-10 0/0:87.1955:25:25:909:0:0:0,-7.52575,-10 0/0:48.0618:12:12:449:0:0:0,-3.61236,-10 0/0:48.0618:12:12:440:0:0:0,-3.61236,-10 0/0:30:6:6:217:0:0:0,-1.80618,-10 0/0:48.0618:12:12:450:0:0:0,-3.61236,-10 0/0:63.1133:17:17:639:0:0:0,-5.11751,-10 0/0:42.0412:10:10:379:0:0:0,-3.0103,-10 0/0:63.1133:17:17:645:0:0:0,-5.11751,-10 0/0:20.9691:3:3:114:0:0:0,-0.90309,-10 0/0:45.0515:11:11:414:0:0:0,-3.31133,-10 0/0:45.0515:11:11:402:0:0:0,-3.31133,-10 0/0:39.0309:9:9:339:0:0:0,-2.70927,-10 0/0:36.0206:8:8:291:0:0:0,-2.40824,-10 0/0:26.9897:5:5:166:0:0:0,-1.50515,-10 0/0:30:6:6:218:0:0:0,-1.80618,-10 0/1:99:22:9:342:13:470:-10,0,-10 0/0:17.9588:2:2:74:0:0:0,-0.60206,-7.03 0/0:30:6:6:216:0:0:0,-1.80618,-10 0/0:51.0721:13:13:492:0:0:0,-3.91339,-10 0/0:26.9897:5:5:186:0:0:0,-1.50515,-10 0/0:48.0618:12:12:420:0:0:0,-3.61236,-10 0/0:36.0206:8:8:303:0:0:0,-2.40824,-10 0/0:36.0206:8:8:302:0:0:0,-2.40824,-10 0/0:42.0412:10:10:376:0:0:0,-3.0103,-10 0/0:45.0515:11:11:418:0:0:0,-3.31133,-10 0/0:39.0309:9:9:330:0:0:0,-2.70927,-10 0/0:72.1442:20:20:747:0:0:0,-6.0206,-10 0/0:45.0515:11:11:376:0:0:0,-3.31133,-10 0/0:30:6:6:202:0:0:0,-1.80618,-10 0/0:48.0618:12:12:451:0:0:0,-3.61236,-10 0/0:48.0618:12:12:446:0:0:0,-3.61236,-10 0/1:78.5926:8:5:189:3:114:-9.97995,0,-10 0/1:99:17:11:406:6:202:-10,0,-10 0/0:69.1339:19:19:671:0:0:0,-5.71957,-10 0/0:23.9794:4:4:123:0:0:0,-1.20412,-10 0/0:57.0927:15:15:546:0:0:0,-4.51545,-10 0/0:20.9691:3:3:105:0:0:0,-0.90309,-9.8 0/0:54.0824:14:14:515:0:0:0,-4.21442,-10 0/0:48.0618:12:12:449:0:0:0,-3.61236,-10 0/1:0.00130992:5:0:0:5:190:-10,-1.50515,0 0/1:99:28:15:561:13:464:-10,0,-10 0/0:36.0206:8:8:301:0:0:0,-2.40824,-10 0/0:60.103:16:16:592:0:0:0,-4.81648,-10 0/0:33.0103:7:7:261:0:0:0,-2.10721,-10 0/0:36.0206:9:8:302:0:0:0,-2.40824,-10 0/0:39.0309:9:9:337:0:0:0,-2.70927,-10 0/0:78.1648:22:22:788:0:0:0,-6.62266,-10 0/0:42.0412:10:10:356:0:0:0,-3.0103,-10 0/0:69.1339:19:19:689:0:0:0,-5.71957,-10 0/0:39.0309:9:9:340:0:0:0,-2.70927,-10 0/0:39.0309:9:9:328:0:0:0,-2.70927,-10 0/0:75.1545:21:21:789:0:0:0,-6.32163,-10 0/0:36.0206:8:8:302:0:0:0,-2.40824,-10 0/0:33.0103:7:7:248:0:0:0,-2.10721,-10 0/0:63.1133:17:17:622:0:0:0,-5.11751,-10 0/0:48.0618:12:12:399:0:0:0,-3.61236,-10 0/0:26.9897:5:5:186:0:0:0,-1.50515,-10 0/0:72.1442:20:20:736:0:0:0,-6.0206,-10 0/0:69.1339:19:19:715:0:0:0,-5.71957,-10 0/0:36.0206:8:8:282:0:0:0,-2.40824,-10 0/0:48.0618:12:12:426:0:0:0,-3.61236,-10 0/0:54.0824:14:14:523:0:0:0,-4.21442,-10 0/0:23.9794:4:4:143:0:0:0,-1.20412,-10 0/0:48.0618:12:12:445:0:0:0,-3.61236,-10 0/0:14.9485:1:1:38:0:0:0,-0.30103,-3.8 0/0:36.0206:8:8:304:0:0:0,-2.40824,-10 0/0:78.1648:22:22:819:0:0:0,-6.62266,-10 0/0:57.0927:15:15:535:0:0:0,-4.51545,-10 0/0:75.1545:21:21:740:0:0:0,-6.32163,-10 0/0:51.0721:13:13:468:0:0:0,-3.91339,-10 0/0:45.0515:11:11:389:0:0:0,-3.31133,-10 0/0:17.9588:2:2:76:0:0:0,-0.60206,-7.22 0/0:36.0206:8:8:290:0:0:0,-2.40824,-10 0/0:45.0515:11:11:407:0:0:0,-3.31133,-10 0/0:23.9794:4:4:147:0:0:0,-1.20412,-10 0/0:36.0206:8:8:296:0:0:0,-2.40824,-10 0/0:45.0515:11:11:402:0:0:0,-3.31133,-10 0/0:60.103:16:16:590:0:0:0,-4.81648,-10 scaffold_181 1242136 . A G 1535.3 . AB=0.594059;ABP=10.7717;AC=5;AF=0.0271739;AN=184;AO=61;CIGAR=1X;DP=2023;DPB=2023;DPRA=1.06568;EPP=4.7546;EPPR=12.5974;GTI=2;LEN=1;MEANALT=1.16667;MQM=59.7213;MQMR=59.8892;NS=92;NUMALT=1;ODDS=1.38837;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2237;QR=72365;RO=1959;RPP=135.47;RPPR=4119.09;RUN=1;SAF=27;SAP=4.7546;SAR=34;SRF=1010;SRP=7.13488;SRR=949;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.4648:11:11:407:0:0:0,-3.31133,-10 0/0:68.5163:16:16:590:0:0:0,-4.81648,-10 0/0:80.5574:20:20:745:0:0:0,-6.0206,-10 0/0:50.4545:10:10:375:0:0:0,-3.0103,-10 0/0:53.4648:11:11:409:0:0:0,-3.31133,-10 0/0:50.4545:10:10:380:0:0:0,-3.0103,-10 0/0:99:50:50:1818:0:0:0,-10,-10 0/0:99:30:30:1122:0:0:0,-9.0309,-10 0/0:77.5471:19:19:705:0:0:0,-5.71957,-10 0/0:26.3721:2:2:76:0:0:0,-0.60206,-7.22 0/0:26.3721:2:2:76:0:0:0,-0.60206,-7.22 0/0:56.4751:12:12:434:0:0:0,-3.61236,-10 0/0:99:33:33:1229:0:0:0,-9.93399,-10 0/0:99:38:38:1404:0:0:0,-10,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:95.6074:25:25:914:0:0:0,-7.52575,-10 0/0:62.4957:14:14:528:0:0:0,-4.21442,-10 0/0:98.616:26:26:958:0:0:0,-7.82678,-10 0/0:99:42:42:1530:0:0:0,-10,-10 0/0:74.5369:18:18:669:0:0:0,-5.41854,-10 0/0:99:33:33:1208:0:0:0,-9.93399,-10 0/0:44.4339:8:8:282:0:0:0,-2.40824,-10 0/0:77.5471:19:19:699:0:0:0,-5.71957,-10 0/0:59.4854:13:13:470:0:0:0,-3.91339,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:86.5779:22:22:831:0:0:0,-6.62266,-10 0/0:59.4854:13:13:464:0:0:0,-3.91339,-10 0/0:95.6074:25:25:942:0:0:0,-7.52575,-10 0/0:99:37:37:1391:0:0:0,-10,-10 0/0:53.4648:11:11:414:0:0:0,-3.31133,-10 0/0:47.4442:9:9:341:0:0:0,-2.70927,-10 0/0:80.5574:20:20:738:0:0:0,-6.0206,-10 0/0:62.4957:14:14:477:0:0:0,-4.21442,-10 0/0:62.4957:14:14:517:0:0:0,-4.21442,-10 0/0:44.4339:8:8:297:0:0:0,-2.40824,-10 0/0:44.4339:8:8:302:0:0:0,-2.40824,-10 0/0:95.6074:26:25:889:0:0:0,-7.52575,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:41.4236:7:7:244:0:0:0,-2.10721,-10 0/0:99:33:33:1229:0:0:0,-9.93399,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:99:28:28:1019:0:0:0,-8.42884,-10 0/0:99:31:31:1176:0:0:0,-9.33193,-10 0/0:98.616:27:26:961:0:0:0,-7.82678,-10 0/0:92.5979:24:24:877:0:0:0,-7.22472,-10 0/0:99:54:54:1984:0:0:0,-10,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:68.5163:16:16:585:0:0:0,-4.81648,-10 0/0:99:43:43:1593:0:0:0,-10,-10 0/0:65.506:15:15:557:0:0:0,-4.51545,-10 0/0:99:48:48:1789:0:0:0,-10,-10 0/0:80.5574:20:20:749:0:0:0,-6.0206,-10 0/0:56.4751:12:12:450:0:0:0,-3.61236,-10 0/0:99:37:37:1355:0:0:0,-10,-10 0/0:44.4339:8:8:298:0:0:0,-2.40824,-10 0/0:89.588:23:23:862:0:0:0,-6.92369,-10 0/0:44.4339:8:8:282:0:0:0,-2.40824,-10 0/0:77.5471:19:19:720:0:0:0,-5.71957,-10 0/0:77.5471:19:19:715:0:0:0,-5.71957,-10 0/0:94.4593:39:38:1409:1:29:0,-7.24911,-10 0/0:86.5779:22:22:813:0:0:0,-6.62266,-10 0/0:99:40:40:1486:0:0:0,-10,-10 0/0:92.5979:24:24:879:0:0:0,-7.22472,-10 0/0:71.5266:17:17:628:0:0:0,-5.11751,-10 0/0:99:35:35:1279:0:0:0,-10,-10 0/0:86.5779:22:22:775:0:0:0,-6.62266,-10 0/0:53.4648:11:11:387:0:0:0,-3.31133,-10 0/1:99:40:19:722:21:759:-10,0,-10 0/1:0.0242255:13:0:0:12:454:-10,-3.61236,0 0/0:83.5677:21:21:792:0:0:0,-6.32163,-10 0/0:95.6074:25:25:940:0:0:0,-7.52575,-10 0/0:99:29:29:1049:0:0:0,-8.72987,-10 0/0:89.588:23:23:864:0:0:0,-6.92369,-10 0/0:99:35:35:1216:0:0:0,-10,-10 0/1:0.404824:16:0:0:16:578:-10,-4.81648,0 0/0:50.4545:10:10:366:0:0:0,-3.0103,-10 0/0:56.4751:12:12:453:0:0:0,-3.61236,-10 0/0:38.4133:6:6:220:0:0:0,-1.80618,-10 0/0:41.4236:7:7:258:0:0:0,-2.10721,-10 0/0:99:38:38:1402:0:0:0,-10,-10 0/0:92.5979:24:24:901:0:0:0,-7.22472,-10 0/0:98.616:26:26:963:0:0:0,-7.82678,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/1:99:23:13:466:10:379:-10,0,-10 0/0:32.3927:4:4:152:0:0:0,-1.20412,-10 0/0:80.5574:20:20:714:0:0:0,-6.0206,-10 0/0:59.4854:13:13:494:0:0:0,-3.91339,-10 0/1:7.45594:9:8:303:1:38:-2.04497,0,-10 0/0:56.4751:12:12:451:0:0:0,-3.61236,-10 0/0:98.616:26:26:984:0:0:0,-7.82678,-10 0/0:71.5266:17:17:640:0:0:0,-5.11751,-10 scaffold_181 1294446 . T C 3144.49 . AB=0.653846;ABP=29.7361;AC=9;AF=0.048913;AN=184;AO=115;CIGAR=1X;DP=1929;DPB=1929;DPRA=1.49038;EPP=3.02918;EPPR=5.88603;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9945;NS=92;NUMALT=1;ODDS=0.609828;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4301;QR=66670;RO=1813;RPP=252.73;RPPR=3939.89;RUN=1;SAF=58;SAP=3.02918;SAR=57;SRF=931;SRP=5.88603;SRR=882;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:34.9734:9:9:342:0:0:0,-2.70927,-10 0/0:22.9322:5:5:190:0:0:0,-1.50515,-10 0/0:99:32:32:1201:0:0:0,-9.63296,-10 0/0:56.0455:16:16:557:0:0:0,-4.81648,-10 0/0:59.0558:17:17:598:0:0:0,-5.11751,-10 0/0:50.0249:14:14:505:0:0:0,-4.21442,-10 0/0:99:49:49:1804:0:0:0,-10,-10 0/0:99:31:31:1138:0:0:0,-9.33193,-10 1/1:27.3671:16:0:0:16:591:-10,-4.81648,0 .:.:.:.:.:.:.:. 0/0:37.9837:10:10:367:0:0:0,-3.0103,-10 0/0:19.9219:4:4:152:0:0:0,-1.20412,-10 0/1:99:48:17:604:31:1169:-10,0,-10 0/0:99:44:44:1624:0:0:0,-10,-10 0/0:71.0969:21:21:773:0:0:0,-6.32163,-10 0/1:99:32:13:486:19:693:-10,0,-10 0/0:98.1831:30:30:1109:0:0:0,-9.0309,-10 0/0:37.9837:10:10:373:0:0:0,-3.0103,-10 0/1:99:21:4:151:17:643:-10,0,-10 0/0:99:54:53:1962:1:38:0,-10,-10 0/0:47.0146:13:13:469:0:0:0,-3.91339,-10 0/0:99:34:34:1223:0:0:0,-10,-10 0/0:25.9425:6:6:228:0:0:0,-1.80618,-10 0/0:86.148:26:26:949:0:0:0,-7.82678,-10 0/0:62.0661:18:18:626:0:0:0,-5.41854,-10 0/0:56.0455:16:16:605:0:0:0,-4.81648,-10 0/0:71.0969:21:21:787:0:0:0,-6.32163,-10 0/0:47.0146:13:13:465:0:0:0,-3.91339,-10 0/0:56.0455:16:16:605:0:0:0,-4.81648,-10 0/0:68.0867:20:20:724:0:0:0,-6.0206,-10 0/0:25.9425:6:6:224:0:0:0,-1.80618,-10 0/0:13.9013:2:2:76:0:0:0,-0.60206,-7.22 0/0:56.0455:16:16:567:0:0:0,-4.81648,-10 0/0:62.0661:18:18:655:0:0:0,-5.41854,-10 0/0:71.0969:21:21:791:0:0:0,-6.32163,-10 0/0:34.9734:9:9:340:0:0:0,-2.70927,-10 0/0:65.0764:19:19:705:0:0:0,-5.71957,-10 0/0:99:35:35:1315:0:0:0,-10,-10 0/0:56.0455:16:16:593:0:0:0,-4.81648,-10 0/0:83.138:25:25:929:0:0:0,-7.52575,-10 0/0:89.1579:27:27:1007:0:0:0,-8.12781,-10 0/0:68.0867:20:20:738:0:0:0,-6.0206,-10 0/0:65.0764:19:19:694:0:0:0,-5.71957,-10 0/0:99:36:36:1311:0:0:0,-10,-10 0/0:56.0455:16:16:602:0:0:0,-4.81648,-10 0/0:37.9837:10:10:354:0:0:0,-3.0103,-10 0/0:99:42:42:1562:0:0:0,-10,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:40.994:11:11:412:0:0:0,-3.31133,-10 0/0:99:34:34:1251:0:0:0,-10,-10 0/0:50.0249:14:14:527:0:0:0,-4.21442,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:68.0867:20:20:746:0:0:0,-6.0206,-10 0/0:25.9425:6:6:211:0:0:0,-1.80618,-10 0/0:99:43:43:1623:0:0:0,-10,-10 0/0:62.0661:18:18:652:0:0:0,-5.41854,-10 0/0:68.0867:20:20:748:0:0:0,-6.0206,-10 1/1:18.3362:13:0:0:13:483:-10,-3.91339,0 0/0:56.0455:16:16:603:0:0:0,-4.81648,-10 0/0:28.9528:7:7:264:0:0:0,-2.10721,-10 0/0:99:36:36:1322:0:0:0,-10,-10 0/0:95.1793:29:29:1041:0:0:0,-8.72987,-10 0/0:92.1674:28:28:1017:0:0:0,-8.42884,-10 0/0:77.1175:23:23:818:0:0:0,-6.92369,-10 0/0:44.0043:12:12:426:0:0:0,-3.61236,-10 0/1:99:29:11:395:18:684:-10,0,-10 0/0:71.0969:21:21:790:0:0:0,-6.32163,-10 0/0:47.0146:13:13:484:0:0:0,-3.91339,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:56.0455:16:16:594:0:0:0,-4.81648,-10 0/0:74.1072:22:22:825:0:0:0,-6.62266,-10 0/0:99:32:32:1137:0:0:0,-9.63296,-10 0/0:83.138:25:25:947:0:0:0,-7.52575,-10 0/0:34.9734:9:9:320:0:0:0,-2.70927,-10 0/0:99:35:35:1245:0:0:0,-10,-10 0/0:68.0867:21:20:728:0:0:0,-6.0206,-10 0/0:44.0043:12:12:452:0:0:0,-3.61236,-10 0/0:68.0867:20:20:745:0:0:0,-6.0206,-10 0/0:34.9734:9:9:338:0:0:0,-2.70927,-10 0/0:34.9734:9:9:341:0:0:0,-2.70927,-10 0/0:99:53:53:1930:0:0:0,-10,-10 0/0:89.1579:27:27:1008:0:0:0,-8.12781,-10 0/0:71.0969:21:21:768:0:0:0,-6.32163,-10 0/0:68.0867:20:20:720:0:0:0,-6.0206,-10 0/0:62.0661:18:18:679:0:0:0,-5.41854,-10 0/0:31.9631:8:8:304:0:0:0,-2.40824,-10 0/0:65.0764:19:19:703:0:0:0,-5.71957,-10 0/0:62.0661:18:18:670:0:0:0,-5.41854,-10 0/0:19.9219:4:4:152:0:0:0,-1.20412,-10 0/0:50.0249:14:14:521:0:0:0,-4.21442,-10 0/0:59.0558:17:17:578:0:0:0,-5.11751,-10 0/0:77.1175:23:23:827:0:0:0,-6.92369,-10 scaffold_181 1340204 . T C 193.886 . AB=0.454545;ABP=3.40511;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=1287;DPB=1287;DPRA=1.58261;EPP=6.48466;EPPR=4.75292;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9749;NS=92;NUMALT=1;ODDS=6.66159;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=335;QR=47417;RO=1276;RPP=24.725;RPPR=2704.76;RUN=1;SAF=3;SAP=6.48466;SAR=7;SRF=630;SRP=3.44596;SRR=646;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.0575:12:12:411:0:0:0,-3.61236,-10 0/0:59.0472:11:11:408:0:0:0,-3.31133,-10 0/0:71.0884:15:15:522:0:0:0,-4.51545,-10 0/0:50.0163:8:8:304:0:0:0,-2.40824,-10 0/0:53.0266:9:9:342:0:0:0,-2.70927,-10 0/0:40.9854:5:5:168:0:0:0,-1.50515,-10 0/0:99:32:32:1196:0:0:0,-9.63296,-10 0/0:71.0884:15:15:545:0:0:0,-4.51545,-10 0/0:56.0369:10:10:358:0:0:0,-3.0103,-10 0/0:37.9751:4:4:152:0:0:0,-1.20412,-10 0/0:53.0266:9:9:323:0:0:0,-2.70927,-10 0/0:43.9957:6:6:218:0:0:0,-1.80618,-10 0/0:83.1295:19:19:712:0:0:0,-5.71957,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:99:28:28:1059:0:0:0,-8.42884,-10 0/0:62.0575:12:12:456:0:0:0,-3.61236,-10 0/0:56.0369:10:10:372:0:0:0,-3.0103,-10 0/0:50.0163:8:8:303:0:0:0,-2.40824,-10 0/0:83.1295:19:19:713:0:0:0,-5.71957,-10 0/0:95.1699:23:23:874:0:0:0,-6.92369,-10 0/0:62.0575:12:12:456:0:0:0,-3.61236,-10 0/0:98.1793:24:24:901:0:0:0,-7.22472,-10 0/0:47.006:7:7:265:0:0:0,-2.10721,-10 0/0:86.1398:20:20:730:0:0:0,-6.0206,-10 0/0:56.0369:10:10:378:0:0:0,-3.0103,-10 0/0:80.1192:18:18:652:0:0:0,-5.41854,-10 0/0:92.16:22:22:834:0:0:0,-6.62266,-10 0/0:68.0781:14:14:532:0:0:0,-4.21442,-10 0/0:80.1192:18:18:673:0:0:0,-5.41854,-10 0/0:77.1089:17:17:641:0:0:0,-5.11751,-10 0/0:34.9648:3:3:114:0:0:0,-0.90309,-10 0/0:50.0163:8:8:303:0:0:0,-2.40824,-10 0/0:62.0575:12:12:454:0:0:0,-3.61236,-10 0/0:50.0163:8:8:302:0:0:0,-2.40824,-10 0/0:77.1089:17:17:645:0:0:0,-5.11751,-10 0/0:40.9854:5:5:190:0:0:0,-1.50515,-10 0/0:43.9957:6:6:223:0:0:0,-1.80618,-10 0/0:62.0575:12:12:455:0:0:0,-3.61236,-10 0/0:40.9854:5:5:190:0:0:0,-1.50515,-10 0/0:62.0575:12:12:408:0:0:0,-3.61236,-10 0/0:86.1398:20:20:735:0:0:0,-6.0206,-10 0/0:56.0369:10:10:377:0:0:0,-3.0103,-10 0/0:56.0369:10:10:380:0:0:0,-3.0103,-10 0/0:99:25:25:902:0:0:0,-7.52575,-10 0/0:68.0781:14:14:515:0:0:0,-4.21442,-10 0/0:40.9854:5:5:186:0:0:0,-1.50515,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:86.1398:20:20:750:0:0:0,-6.0206,-10 0/0:56.0369:10:10:378:0:0:0,-3.0103,-10 0/1:99:22:12:438:10:335:-10,0,-10 0/0:65.0678:13:13:493:0:0:0,-3.91339,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:62.0575:12:12:401:0:0:0,-3.61236,-10 0/0:56.0369:10:10:379:0:0:0,-3.0103,-10 0/0:89.1499:21:21:793:0:0:0,-6.32163,-10 0/0:47.006:7:7:247:0:0:0,-2.10721,-10 0/0:71.0884:15:15:560:0:0:0,-4.51545,-10 0/0:50.0163:8:8:300:0:0:0,-2.40824,-10 0/0:62.0575:12:12:445:0:0:0,-3.61236,-10 0/0:53.0266:9:9:342:0:0:0,-2.70927,-10 0/0:83.1295:20:19:717:0:0:0,-5.71957,-10 0/0:59.0472:11:11:416:0:0:0,-3.31133,-10 0/0:98.1793:24:24:866:0:0:0,-7.22472,-10 0/0:74.0987:16:16:601:0:0:0,-4.81648,-10 0/0:59.0472:11:11:418:0:0:0,-3.31133,-10 0/0:99:29:29:1067:0:0:0,-8.72987,-10 0/0:71.0884:15:15:570:0:0:0,-4.51545,-10 0/0:43.9957:6:6:228:0:0:0,-1.80618,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:50.0163:8:8:304:0:0:0,-2.40824,-10 0/0:50.0163:8:8:304:0:0:0,-2.40824,-10 0/0:99:26:26:986:0:0:0,-7.82678,-10 0/0:59.0472:11:11:417:0:0:0,-3.31133,-10 0/0:53.0266:9:9:328:0:0:0,-2.70927,-10 0/0:74.0987:16:16:606:0:0:0,-4.81648,-10 0/0:47.006:7:7:235:0:0:0,-2.10721,-10 0/0:68.0781:14:14:497:0:0:0,-4.21442,-10 0/0:62.0575:12:12:445:0:0:0,-3.61236,-10 0/0:31.9545:2:2:76:0:0:0,-0.60206,-7.22 0/0:50.0163:8:8:304:0:0:0,-2.40824,-10 0/0:83.1295:19:19:722:0:0:0,-5.71957,-10 0/0:95.1699:23:23:863:0:0:0,-6.92369,-10 0/0:65.0678:13:13:493:0:0:0,-3.91339,-10 0/0:74.0987:16:16:598:0:0:0,-4.81648,-10 0/0:74.0987:16:16:587:0:0:0,-4.81648,-10 0/0:47.006:7:7:259:0:0:0,-2.10721,-10 0/0:65.0678:13:13:492:0:0:0,-3.91339,-10 0/0:77.1089:17:17:606:0:0:0,-5.11751,-10 0/0:28.9442:1:1:38:0:0:0,-0.30103,-3.8 0/0:86.1398:20:20:730:0:0:0,-6.0206,-10 0/0:50.0163:8:8:304:0:0:0,-2.40824,-10 0/0:68.0781:14:14:513:0:0:0,-4.21442,-10 scaffold_181 1340218 . A G 152.85 . AB=0.583333;ABP=3.73412;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1292;DPB=1292;DPRA=1.21622;EPP=4.09604;EPPR=12.5306;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9751;NS=92;NUMALT=1;ODDS=8.77938;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=301;QR=47295;RO=1283;RPP=20.3821;RPPR=2542.81;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=627;SRP=4.43369;SRR=656;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:71.2433:12:12:440:0:0:0,-3.61236,-10 0/0:68.233:11:11:413:0:0:0,-3.31133,-10 0/0:80.2742:15:15:527:0:0:0,-4.51545,-10 0/0:59.2021:8:8:304:0:0:0,-2.40824,-10 0/0:62.2124:9:9:342:0:0:0,-2.70927,-10 0/0:50.1712:5:5:177:0:0:0,-1.50515,-10 0/0:99:32:32:1202:0:0:0,-9.63296,-10 0/0:80.2742:15:15:565:0:0:0,-4.51545,-10 0/0:65.2227:10:10:375:0:0:0,-3.0103,-10 0/0:47.1609:4:4:147:0:0:0,-1.20412,-10 0/0:62.2124:9:9:341:0:0:0,-2.70927,-10 0/0:53.1815:6:6:202:0:0:0,-1.80618,-10 0/0:92.315:19:19:705:0:0:0,-5.71957,-10 0/0:99:27:27:988:0:0:0,-8.12781,-10 0/0:99:28:28:1040:0:0:0,-8.42884,-10 0/0:71.2433:12:12:449:0:0:0,-3.61236,-10 0/0:65.2227:10:10:378:0:0:0,-3.0103,-10 0/0:59.2021:8:8:293:0:0:0,-2.40824,-10 0/0:92.315:19:19:721:0:0:0,-5.71957,-10 0/0:99:23:23:858:0:0:0,-6.92369,-10 0/0:71.2433:12:12:451:0:0:0,-3.61236,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:56.1918:7:7:265:0:0:0,-2.10721,-10 0/0:95.3249:20:20:750:0:0:0,-6.0206,-10 0/0:65.2227:10:10:365:0:0:0,-3.0103,-10 0/0:89.3049:18:18:615:0:0:0,-5.41854,-10 0/0:99:22:22:824:0:0:0,-6.62266,-10 0/0:77.2639:14:14:522:0:0:0,-4.21442,-10 0/0:89.3049:18:18:650:0:0:0,-5.41854,-10 0/0:86.2947:17:17:622:0:0:0,-5.11751,-10 0/0:44.1506:3:3:112:0:0:0,-0.90309,-10 0/0:59.2021:8:8:304:0:0:0,-2.40824,-10 0/0:71.2433:12:12:446:0:0:0,-3.61236,-10 0/0:59.2021:8:8:303:0:0:0,-2.40824,-10 0/0:86.2947:17:17:637:0:0:0,-5.11751,-10 0/0:50.1712:5:5:185:0:0:0,-1.50515,-10 0/0:53.1815:6:6:186:0:0:0,-1.80618,-10 0/1:99:12:5:190:7:266:-10,0,-10 0/0:50.1712:5:5:190:0:0:0,-1.50515,-10 0/0:71.2433:12:12:430:0:0:0,-3.61236,-10 0/0:95.3249:20:20:721:0:0:0,-6.0206,-10 0/0:65.2227:10:10:377:0:0:0,-3.0103,-10 0/0:65.2227:10:10:378:0:0:0,-3.0103,-10 0/0:99:28:28:1053:0:0:0,-8.42884,-10 0/0:77.2639:14:14:486:0:0:0,-4.21442,-10 0/0:50.1712:5:5:189:0:0:0,-1.50515,-10 0/0:99:27:27:984:0:0:0,-8.12781,-10 0/0:95.3249:20:20:729:0:0:0,-6.0206,-10 0/0:65.2227:10:10:356:0:0:0,-3.0103,-10 0/0:55.4301:22:21:750:1:35:0,-1.78024,-10 0/0:74.2536:13:13:474:0:0:0,-3.91339,-10 0/0:99:32:32:1204:0:0:0,-9.63296,-10 0/0:71.2433:12:12:430:0:0:0,-3.61236,-10 0/0:65.2227:10:10:380:0:0:0,-3.0103,-10 0/0:98.3344:21:21:775:0:0:0,-6.32163,-10 0/0:56.1918:7:7:231:0:0:0,-2.10721,-10 0/0:80.2742:15:15:555:0:0:0,-4.51545,-10 0/0:59.2021:8:8:300:0:0:0,-2.40824,-10 0/0:71.2433:12:12:441:0:0:0,-3.61236,-10 0/0:62.2124:9:9:315:0:0:0,-2.70927,-10 0/0:92.315:20:19:700:0:0:0,-5.71957,-10 0/0:68.233:11:11:418:0:0:0,-3.31133,-10 0/0:99:24:24:897:0:0:0,-7.22472,-10 0/0:83.2844:16:16:585:0:0:0,-4.81648,-10 0/0:68.233:11:11:405:0:0:0,-3.31133,-10 0/0:99:30:30:1125:0:0:0,-9.0309,-10 0/0:80.2742:15:15:533:0:0:0,-4.51545,-10 0/0:53.1815:6:6:228:0:0:0,-1.80618,-10 0/0:99:34:34:1268:0:0:0,-10,-10 0/0:59.2021:8:8:304:0:0:0,-2.40824,-10 0/0:59.2021:8:8:303:0:0:0,-2.40824,-10 0/0:99:26:26:957:0:0:0,-7.82678,-10 0/0:68.233:11:11:417:0:0:0,-3.31133,-10 0/0:62.2124:9:9:340:0:0:0,-2.70927,-10 0/0:83.2844:16:16:607:0:0:0,-4.81648,-10 0/0:56.1918:7:7:248:0:0:0,-2.10721,-10 0/0:77.2639:14:14:497:0:0:0,-4.21442,-10 0/0:71.2433:12:12:429:0:0:0,-3.61236,-10 0/0:41.1403:2:2:76:0:0:0,-0.60206,-7.22 0/0:59.2021:8:8:300:0:0:0,-2.40824,-10 0/0:92.315:19:19:715:0:0:0,-5.71957,-10 0/0:99:23:23:805:0:0:0,-6.92369,-10 0/0:74.2536:13:13:462:0:0:0,-3.91339,-10 0/0:83.2844:16:16:600:0:0:0,-4.81648,-10 0/0:83.2844:16:16:586:0:0:0,-4.81648,-10 0/0:56.1918:7:7:266:0:0:0,-2.10721,-10 0/0:74.2536:13:13:491:0:0:0,-3.91339,-10 0/0:86.2947:17:17:616:0:0:0,-5.11751,-10 0/0:38.13:1:1:38:0:0:0,-0.30103,-3.8 0/0:95.3249:20:20:753:0:0:0,-6.0206,-10 0/0:59.2021:8:8:282:0:0:0,-2.40824,-10 0/0:77.2639:14:14:521:0:0:0,-4.21442,-10 scaffold_181 1495879 . C T 187.047 . AB=0.357143;ABP=7.97367;AC=2;AF=0.0108696;AN=184;AO=11;CIGAR=1X;DP=1517;DPB=1517;DPRA=0.865445;EPP=12.6832;EPPR=5.55378;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9954;NS=92;NUMALT=1;ODDS=11.5429;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=395;QR=54641;RO=1506;RPP=26.8965;RPPR=3186.97;RUN=1;SAF=9;SAP=12.6832;SAR=2;SRF=742;SRP=3.70817;SRR=764;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:21:21:780:0:0:0,-6.32163,-10 0/0:89.2639:16:16:574:0:0:0,-4.81648,-10 0/0:99:31:31:1158:0:0:0,-9.33193,-10 0/0:77.2232:12:12:447:0:0:0,-3.61236,-10 0/0:83.2437:14:14:496:0:0:0,-4.21442,-10 0/0:74.2129:11:11:401:0:0:0,-3.31133,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:99:22:22:818:0:0:0,-6.62266,-10 0/0:86.2539:15:15:557:0:0:0,-4.51545,-10 0/0:50.1305:3:3:110:0:0:0,-0.90309,-10 0/0:59.1614:6:6:194:0:0:0,-1.80618,-10 0/0:62.1717:7:7:261:0:0:0,-2.10721,-10 0/0:99:36:36:1280:0:0:0,-10,-10 0/0:99:25:25:919:0:0:0,-7.52575,-10 0/0:99:23:23:836:0:0:0,-6.92369,-10 0/0:99:25:25:945:0:0:0,-7.52575,-10 0/0:99:20:20:722:0:0:0,-6.0206,-10 0/0:62.1717:7:7:260:0:0:0,-2.10721,-10 0/0:92.2738:17:17:639:0:0:0,-5.11751,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:83.2437:14:14:485:0:0:0,-4.21442,-10 0/0:99:22:22:811:0:0:0,-6.62266,-10 0/0:65.182:8:8:302:0:0:0,-2.40824,-10 0/0:89.2639:16:16:594:0:0:0,-4.81648,-10 0/0:62.2621:15:14:507:1:16:0,-1.73936,-10 0/0:86.2539:15:15:554:0:0:0,-4.51545,-10 0/0:86.2539:15:15:547:0:0:0,-4.51545,-10 0/0:74.2129:11:11:403:0:0:0,-3.31133,-10 0/0:92.2738:17:17:600:0:0:0,-5.11751,-10 0/0:98.2917:19:19:684:0:0:0,-5.71957,-10 0/0:62.1717:7:7:264:0:0:0,-2.10721,-10 0/0:71.2026:10:10:354:0:0:0,-3.0103,-10 0/0:77.2232:12:12:426:0:0:0,-3.61236,-10 0/0:89.2639:16:16:601:0:0:0,-4.81648,-10 0/0:95.2832:18:18:650:0:0:0,-5.41854,-10 0/0:56.1511:5:5:166:0:0:0,-1.50515,-10 0/0:77.2232:12:12:444:0:0:0,-3.61236,-10 0/0:99:28:28:1058:0:0:0,-8.42884,-10 0/0:77.2232:12:12:407:0:0:0,-3.61236,-10 0/0:86.2539:15:15:532:0:0:0,-4.51545,-10 0/0:99:32:32:1136:0:0:0,-9.63296,-10 0/0:83.2437:14:14:517:0:0:0,-4.21442,-10 0/0:89.2639:16:16:598:0:0:0,-4.81648,-10 0/0:95.2832:18:18:636:0:0:0,-5.41854,-10 0/0:99:21:21:789:0:0:0,-6.32163,-10 0/0:98.2917:19:19:677:0:0:0,-5.71957,-10 0/0:99:34:34:1218:0:0:0,-10,-10 0/0:89.2639:16:16:592:0:0:0,-4.81648,-10 0/0:71.2026:10:10:361:0:0:0,-3.0103,-10 0/0:99:23:23:765:0:0:0,-6.92369,-10 0/0:99:22:22:806:0:0:0,-6.62266,-10 0/0:99:21:21:717:0:0:0,-6.32163,-10 0/0:83.2437:14:14:491:0:0:0,-4.21442,-10 0/0:50.1305:3:3:114:0:0:0,-0.90309,-10 0/0:99:34:34:1215:0:0:0,-10,-10 0/0:71.2026:10:10:373:0:0:0,-3.0103,-10 0/0:68.1923:9:9:291:0:0:0,-2.70927,-10 0/0:68.1923:9:9:337:0:0:0,-2.70927,-10 0/0:65.182:8:8:300:0:0:0,-2.40824,-10 0/0:86.2539:15:15:570:0:0:0,-4.51545,-10 0/0:99:22:22:779:0:0:0,-6.62266,-10 0/0:80.2334:13:13:481:0:0:0,-3.91339,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:74.2129:11:11:362:0:0:0,-3.31133,-10 0/0:59.1614:6:6:223:0:0:0,-1.80618,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/0:99:22:22:820:0:0:0,-6.62266,-10 0/0:89.2639:16:16:556:0:0:0,-4.81648,-10 0/0:99:28:28:1039:0:0:0,-8.42884,-10 0/0:56.1511:5:5:173:0:0:0,-1.50515,-10 0/0:77.2232:12:12:443:0:0:0,-3.61236,-10 0/1:99:13:7:253:6:227:-10,0,-10 0/1:91.9367:15:11:398:4:152:-10,0,-10 0/0:68.1923:9:9:291:0:0:0,-2.70927,-10 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:65.182:8:8:299:0:0:0,-2.40824,-10 0/0:99:21:21:778:0:0:0,-6.32163,-10 0/0:71.2026:10:10:380:0:0:0,-3.0103,-10 0/0:50.1305:3:3:111:0:0:0,-0.90309,-10 0/0:59.1614:6:6:217:0:0:0,-1.80618,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:92.2738:17:17:613:0:0:0,-5.11751,-10 0/0:92.2738:17:17:620:0:0:0,-5.11751,-10 0/0:99:20:20:729:0:0:0,-6.0206,-10 0/0:99:21:21:795:0:0:0,-6.32163,-10 0/0:59.1614:6:6:212:0:0:0,-1.80618,-10 0/0:77.2232:12:12:406:0:0:0,-3.61236,-10 0/0:71.2026:10:10:356:0:0:0,-3.0103,-10 0/0:56.1511:5:5:166:0:0:0,-1.50515,-10 0/0:99:21:21:778:0:0:0,-6.32163,-10 0/0:89.2639:16:16:576:0:0:0,-4.81648,-10 0/0:92.2738:17:17:626:0:0:0,-5.11751,-10 scaffold_181 1495882 . C T 626.574 . AB=0.613636;ABP=7.94546;AC=3;AF=0.0163043;AN=184;AO=29;CIGAR=1X;DP=1522;DPB=1522;DPRA=1.00361;EPP=4.88226;EPPR=7.57447;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9953;NS=92;NUMALT=1;ODDS=6.59031;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=981;QR=54331;RO=1492;RPP=57.5966;RPPR=3122.39;RUN=1;SAF=18;SAP=6.67934;SAR=11;SRF=732;SRP=4.15134;SRR=760;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:86.3382:21:21:765:0:0:0,-6.32163,-10 0/0:71.2867:16:16:600:0:0:0,-4.81648,-10 0/0:99:31:31:1126:0:0:0,-9.33193,-10 0/0:59.2455:12:12:442:0:0:0,-3.61236,-10 0/0:65.2661:14:14:492:0:0:0,-4.21442,-10 0/1:0.00160606:11:0:0:11:395:-10,-3.31133,0 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:92.3587:23:23:851:0:0:0,-6.92369,-10 0/0:68.2764:15:15:545:0:0:0,-4.51545,-10 0/0:32.1528:3:3:103:0:0:0,-0.90309,-9.61333 0/0:41.1837:6:6:170:0:0:0,-1.80618,-10 0/0:44.194:7:7:222:0:0:0,-2.10721,-10 0/0:99:36:36:1330:0:0:0,-10,-10 0/0:98.3792:25:25:928:0:0:0,-7.52575,-10 0/0:95.3656:24:24:890:0:0:0,-7.22472,-10 0/0:98.3792:25:25:948:0:0:0,-7.52575,-10 0/0:83.3279:20:20:703:0:0:0,-6.0206,-10 0/0:44.194:7:7:265:0:0:0,-2.10721,-10 0/0:74.297:17:17:620:0:0:0,-5.11751,-10 0/0:99:36:36:1330:0:0:0,-10,-10 0/0:65.2661:14:14:507:0:0:0,-4.21442,-10 0/0:89.3485:22:22:797:0:0:0,-6.62266,-10 0/0:50.2146:9:9:342:0:0:0,-2.70927,-10 0/0:71.2867:16:16:602:0:0:0,-4.81648,-10 0/0:68.2764:15:15:547:0:0:0,-4.51545,-10 0/0:68.2764:15:15:540:0:0:0,-4.51545,-10 0/0:68.2764:15:15:517:0:0:0,-4.51545,-10 0/0:56.2352:11:11:394:0:0:0,-3.31133,-10 0/0:74.297:17:17:621:0:0:0,-5.11751,-10 0/0:80.3175:19:19:715:0:0:0,-5.71957,-10 0/0:44.194:7:7:265:0:0:0,-2.10721,-10 0/0:28.6411:10:9:338:1:15:0,-0.5103,-10 0/0:59.2455:12:12:403:0:0:0,-3.61236,-10 0/0:71.2867:16:16:577:0:0:0,-4.81648,-10 0/0:77.3072:18:18:613:0:0:0,-5.41854,-10 0/0:38.1734:5:5:188:0:0:0,-1.50515,-10 0/0:59.2455:12:12:408:0:0:0,-3.61236,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:59.2455:12:12:441:0:0:0,-3.61236,-10 0/0:68.2764:15:15:546:0:0:0,-4.51545,-10 0/0:99:32:32:1183:0:0:0,-9.63296,-10 0/0:65.2661:14:14:527:0:0:0,-4.21442,-10 0/0:71.2867:16:16:570:0:0:0,-4.81648,-10 0/0:77.3072:18:18:661:0:0:0,-5.41854,-10 0/0:86.3382:21:21:766:0:0:0,-6.32163,-10 0/0:80.3175:19:19:648:0:0:0,-5.71957,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:71.2867:16:16:598:0:0:0,-4.81648,-10 0/0:53.2249:10:10:359:0:0:0,-3.0103,-10 0/0:89.3485:23:22:751:0:0:0,-6.62266,-10 0/0:89.3485:22:22:810:0:0:0,-6.62266,-10 0/0:86.3382:21:21:770:0:0:0,-6.32163,-10 0/0:65.2661:14:14:496:0:0:0,-4.21442,-10 0/0:32.1528:3:3:114:0:0:0,-0.90309,-10 0/0:99:34:34:1197:0:0:0,-10,-10 0/0:53.2249:10:10:377:0:0:0,-3.0103,-10 0/0:50.2146:9:9:310:0:0:0,-2.70927,-10 0/0:50.2146:9:9:342:0:0:0,-2.70927,-10 0/0:47.2043:8:8:294:0:0:0,-2.40824,-10 0/0:68.2764:15:15:567:0:0:0,-4.51545,-10 0/1:99:22:10:358:12:419:-10,0,-10 0/0:62.2558:13:13:484:0:0:0,-3.91339,-10 0/0:85.8643:29:28:1036:1:14:0,-5.86747,-10 0/1:86.6396:11:7:258:4:138:-10,0,-10 0/0:41.1837:6:6:225:0:0:0,-1.80618,-10 0/0:99:34:34:1236:0:0:0,-10,-10 0/0:89.3485:22:22:832:0:0:0,-6.62266,-10 0/0:71.2867:16:16:598:0:0:0,-4.81648,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:38.1734:5:5:167:0:0:0,-1.50515,-10 0/0:59.2455:12:12:450:0:0:0,-3.61236,-10 0/0:62.2558:13:13:439:0:0:0,-3.91339,-10 0/0:68.2764:15:15:569:0:0:0,-4.51545,-10 0/0:50.2146:9:9:321:0:0:0,-2.70927,-10 0/0:99:26:26:937:0:0:0,-7.82678,-10 0/0:47.2043:8:8:303:0:0:0,-2.40824,-10 0/0:86.3382:21:21:776:0:0:0,-6.32163,-10 0/0:53.2249:10:10:378:0:0:0,-3.0103,-10 0/0:32.1528:3:3:113:0:0:0,-0.90309,-10 0/0:41.1837:6:6:223:0:0:0,-1.80618,-10 0/0:99:36:36:1241:0:0:0,-10,-10 0/0:74.297:17:17:616:0:0:0,-5.11751,-10 0/0:74.297:17:17:643:0:0:0,-5.11751,-10 0/0:83.3279:20:20:727:0:0:0,-6.0206,-10 0/0:86.3382:21:21:783:0:0:0,-6.32163,-10 0/0:41.1837:6:6:225:0:0:0,-1.80618,-10 0/0:59.2455:12:12:438:0:0:0,-3.61236,-10 0/0:53.2249:10:10:347:0:0:0,-3.0103,-10 0/0:38.1734:5:5:183:0:0:0,-1.50515,-10 0/0:86.3382:21:21:763:0:0:0,-6.32163,-10 0/0:71.2867:16:16:593:0:0:0,-4.81648,-10 0/0:74.297:17:17:619:0:0:0,-5.11751,-10 scaffold_181 1555037 . A C 646.608 . AB=0.736842;ABP=21.525;AC=2;AF=0.0108696;AN=184;AO=29;CIGAR=1X;DP=1878;DPB=1878;DPRA=0.911819;EPP=15.6647;EPPR=9.28227;GTI=1;LEN=1;MEANALT=1;MQM=59.4483;MQMR=59.9816;NS=92;NUMALT=1;ODDS=5.41918;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1010;QR=66862;RO=1845;RPP=65.983;RPPR=3974.71;RUN=1;SAF=8;SAP=15.6647;SAR=21;SRF=886;SRP=9.28227;SRR=959;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.6746:12:12:445:0:0:0,-3.61236,-10 0/0:53.6746:12:12:396:0:0:0,-3.61236,-10 0/0:99:38:38:1361:0:0:0,-10,-10 0/0:53.6746:12:12:441:0:0:0,-3.61236,-10 0/0:32.6025:5:5:186:0:0:0,-1.50515,-10 0/0:41.6334:8:8:302:0:0:0,-2.40824,-10 0/0:99:39:39:1383:0:0:0,-10,-10 0/0:92.8075:25:25:908:0:0:0,-7.52575,-10 0/0:53.6746:12:12:455:0:0:0,-3.61236,-10 0/0:32.6025:5:5:183:0:0:0,-1.50515,-10 0/0:29.5922:4:4:150:0:0:0,-1.20412,-10 0/0:35.6128:6:6:227:0:0:0,-1.80618,-10 0/0:99:37:37:1333:0:0:0,-10,-10 0/0:99:34:34:1241:0:0:0,-10,-10 0/0:92.8075:25:25:915:0:0:0,-7.52575,-10 0/0:98.825:27:27:981:0:0:0,-8.12781,-10 0/0:86.7877:23:23:842:0:0:0,-6.92369,-10 0/0:53.6746:12:12:450:0:0:0,-3.61236,-10 0/0:89.7977:24:24:808:0:0:0,-7.22472,-10 0/0:99:43:43:1501:0:0:0,-10,-10 0/0:68.7261:17:17:635:0:0:0,-5.11751,-10 0/0:98.825:27:27:1009:0:0:0,-8.12781,-10 0/0:38.6231:7:7:253:0:0:0,-2.10721,-10 0/0:74.7467:19:19:705:0:0:0,-5.71957,-10 0/0:99:33:33:1178:0:0:0,-9.93399,-10 0/0:83.7775:22:22:812:0:0:0,-6.62266,-10 0/0:77.757:20:20:729:0:0:0,-6.0206,-10 0/0:56.6849:13:13:459:0:0:0,-3.91339,-10 0/0:83.7775:22:22:801:0:0:0,-6.62266,-10 0/0:99:38:38:1344:0:0:0,-10,-10 0/0:47.654:10:10:360:0:0:0,-3.0103,-10 0/0:50.6643:11:11:412:0:0:0,-3.31133,-10 0/0:77.757:20:20:695:0:0:0,-6.0206,-10 0/0:71.7364:18:18:650:0:0:0,-5.41854,-10 0/0:86.7877:23:23:822:0:0:0,-6.92369,-10 0/0:38.6231:7:7:240:0:0:0,-2.10721,-10 0/0:50.6643:11:11:414:0:0:0,-3.31133,-10 0/0:99:33:33:1215:0:0:0,-9.93399,-10 0/0:56.6849:13:13:474:0:0:0,-3.91339,-10 0/0:50.6643:11:11:395:0:0:0,-3.31133,-10 0/0:98.825:28:27:958:0:0:0,-8.12781,-10 0/0:83.7775:22:22:823:0:0:0,-6.62266,-10 0/0:74.7467:19:19:685:0:0:0,-5.71957,-10 0/0:98.825:27:27:957:0:0:0,-8.12781,-10 0/0:92.8075:25:25:911:0:0:0,-7.52575,-10 0/0:53.6746:12:12:453:0:0:0,-3.61236,-10 0/0:99:49:49:1753:0:0:0,-10,-10 0/0:95.8168:26:26:962:0:0:0,-7.82678,-10 0/0:53.6746:12:12:445:0:0:0,-3.61236,-10 0/0:99:34:33:1208:0:0:0,-9.93399,-10 0/0:44.6437:9:9:337:0:0:0,-2.70927,-10 0/0:99:34:34:1249:0:0:0,-10,-10 0/0:59.6952:14:14:532:0:0:0,-4.21442,-10 0/0:56.6849:13:13:485:0:0:0,-3.91339,-10 0/0:99:50:50:1807:0:0:0,-10,-10 0/0:59.6952:14:14:527:0:0:0,-4.21442,-10 0/0:80.7673:21:21:767:0:0:0,-6.32163,-10 0/0:32.6025:5:5:181:0:0:0,-1.50515,-10 0/0:65.7158:16:16:563:0:0:0,-4.81648,-10 0/0:41.8017:18:17:632:1:15:0,-2.66327,-10 0/0:89.7977:24:24:876:0:0:0,-7.22472,-10 0/0:89.7977:24:24:883:0:0:0,-7.22472,-10 0/0:99:39:38:1399:0:0:0,-10,-10 0/0:99:29:29:1079:0:0:0,-8.72987,-10 0/0:59.6952:14:14:480:0:0:0,-4.21442,-10 0/0:99:32:32:1123:0:0:0,-9.63296,-10 0/0:59.6952:14:14:488:0:0:0,-4.21442,-10 0/0:50.6643:11:11:416:0:0:0,-3.31133,-10 0/0:99:35:35:1309:0:0:0,-10,-10 0/0:47.654:10:10:378:0:0:0,-3.0103,-10 0/0:53.6746:12:12:442:0:0:0,-3.61236,-10 0/0:99:53:53:1898:0:0:0,-10,-10 0/0:80.7673:21:21:757:0:0:0,-6.32163,-10 0/1:0.000177963:8:0:0:8:298:-10,-2.40824,0 0/1:99:30:10:366:20:697:-10,0,-10 0/0:38.6231:7:7:241:0:0:0,-2.10721,-10 0/0:65.7158:16:16:545:0:0:0,-4.81648,-10 0/0:59.6952:14:14:498:0:0:0,-4.21442,-10 0/0:38.6231:7:7:256:0:0:0,-2.10721,-10 0/0:53.6746:12:12:454:0:0:0,-3.61236,-10 0/0:99:38:38:1361:0:0:0,-10,-10 0/0:99:42:42:1484:0:0:0,-10,-10 0/0:95.8168:26:26:940:0:0:0,-7.82678,-10 0/0:59.6952:14:14:498:0:0:0,-4.21442,-10 0/0:99:33:32:1196:0:0:0,-9.63296,-10 0/0:23.5716:2:2:63:0:0:0,-0.60206,-5.985 0/0:59.6952:14:14:496:0:0:0,-4.21442,-10 0/0:47.654:10:10:347:0:0:0,-3.0103,-10 0/0:44.6437:9:9:316:0:0:0,-2.70927,-10 0/0:62.7055:15:15:551:0:0:0,-4.51545,-10 0/0:71.7364:18:18:665:0:0:0,-5.41854,-10 0/0:74.7467:19:19:712:0:0:0,-5.71957,-10 scaffold_181 1555046 . A G 707.607 . AB=0.592593;ABP=7.03155;AC=2;AF=0.0108696;AN=184;AO=33;CIGAR=1X;DP=1878;DPB=1878;DPRA=1.13156;EPP=3.60252;EPPR=11.1183;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9729;NS=92;NUMALT=1;ODDS=1.92776;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1085;QR=67590;RO=1845;RPP=74.6689;RPPR=4000.7;RUN=1;SAF=15;SAP=3.60252;SAR=18;SRF=882;SRP=10.7323;SRR=963;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:7.40404e-05:12:1:14:11:384:-10,-1.13318,0 0/0:47.3423:12:12:420:0:0:0,-3.61236,-10 0/0:99:38:38:1391:0:0:0,-10,-10 0/0:47.3423:12:12:451:0:0:0,-3.61236,-10 0/0:26.2702:5:5:190:0:0:0,-1.50515,-10 0/0:35.3011:8:8:302:0:0:0,-2.40824,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:86.4758:25:25:925:0:0:0,-7.52575,-10 0/0:47.3423:12:12:446:0:0:0,-3.61236,-10 0/0:26.2702:5:5:190:0:0:0,-1.50515,-10 0/0:23.2599:4:4:152:0:0:0,-1.20412,-10 0/0:29.2805:6:6:227:0:0:0,-1.80618,-10 0/0:99:37:37:1335:0:0:0,-10,-10 0/0:99:34:34:1222:0:0:0,-10,-10 0/0:86.4758:25:25:944:0:0:0,-7.52575,-10 0/0:92.495:27:27:980:0:0:0,-8.12781,-10 0/0:80.4555:23:23:836:0:0:0,-6.92369,-10 0/0:47.3423:12:12:427:0:0:0,-3.61236,-10 0/0:83.4657:24:24:860:0:0:0,-7.22472,-10 0/0:99:43:43:1553:0:0:0,-10,-10 0/0:62.3938:17:17:630:0:0:0,-5.11751,-10 0/0:92.495:27:27:994:0:0:0,-8.12781,-10 0/0:32.2908:7:7:266:0:0:0,-2.10721,-10 0/0:68.4144:19:19:692:0:0:0,-5.71957,-10 0/0:99:33:33:1242:0:0:0,-9.93399,-10 0/0:77.4453:22:22:824:0:0:0,-6.62266,-10 0/0:71.4247:20:20:738:0:0:0,-6.0206,-10 0/0:50.3526:13:13:488:0:0:0,-3.91339,-10 0/0:77.4453:22:22:820:0:0:0,-6.62266,-10 0/0:99:38:38:1371:0:0:0,-10,-10 0/0:41.3217:10:10:349:0:0:0,-3.0103,-10 0/0:44.332:11:11:405:0:0:0,-3.31133,-10 0/0:71.4247:20:20:701:0:0:0,-6.0206,-10 0/0:65.4041:18:18:672:0:0:0,-5.41854,-10 0/0:80.4555:23:23:869:0:0:0,-6.92369,-10 0/0:32.2908:7:7:246:0:0:0,-2.10721,-10 0/0:44.332:11:11:404:0:0:0,-3.31133,-10 0/0:99:33:33:1246:0:0:0,-9.93399,-10 0/0:50.3526:13:13:456:0:0:0,-3.91339,-10 0/0:44.332:11:11:394:0:0:0,-3.31133,-10 0/0:95.5069:28:28:1014:0:0:0,-8.42884,-10 0/0:77.4453:22:22:820:0:0:0,-6.62266,-10 0/0:68.4144:19:19:686:0:0:0,-5.71957,-10 0/0:92.495:27:27:982:0:0:0,-8.12781,-10 0/0:86.4758:25:25:891:0:0:0,-7.52575,-10 0/0:47.3423:12:12:416:0:0:0,-3.61236,-10 0/0:99:49:49:1778:0:0:0,-10,-10 0/0:89.4856:26:26:936:0:0:0,-7.82678,-10 0/0:47.3423:12:12:448:0:0:0,-3.61236,-10 0/0:99:34:34:1240:0:0:0,-10,-10 0/0:38.3114:9:9:316:0:0:0,-2.70927,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/0:53.3629:14:14:529:0:0:0,-4.21442,-10 0/0:50.3526:13:13:489:0:0:0,-3.91339,-10 0/0:99:50:50:1783:0:0:0,-10,-10 0/0:53.3629:14:14:527:0:0:0,-4.21442,-10 0/0:74.435:21:21:751:0:0:0,-6.32163,-10 0/0:26.2702:5:5:184:0:0:0,-1.50515,-10 0/0:59.3835:16:16:603:0:0:0,-4.81648,-10 0/0:65.4041:18:18:664:0:0:0,-5.41854,-10 0/0:83.4657:24:24:887:0:0:0,-7.22472,-10 0/0:83.4657:24:24:875:0:0:0,-7.22472,-10 0/0:99:39:39:1477:0:0:0,-10,-10 0/0:98.517:29:29:1093:0:0:0,-8.72987,-10 0/0:53.3629:14:14:501:0:0:0,-4.21442,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:53.3629:14:14:526:0:0:0,-4.21442,-10 0/0:44.332:11:11:389:0:0:0,-3.31133,-10 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:41.3217:10:10:380:0:0:0,-3.0103,-10 0/0:47.3423:12:12:453:0:0:0,-3.61236,-10 0/0:99:53:53:1945:0:0:0,-10,-10 0/0:74.435:21:21:783:0:0:0,-6.32163,-10 0/0:35.3011:8:8:303:0:0:0,-2.40824,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:32.2908:7:7:259:0:0:0,-2.10721,-10 0/0:59.3835:16:16:561:0:0:0,-4.81648,-10 0/0:53.3629:14:14:503:0:0:0,-4.21442,-10 0/0:32.2908:7:7:213:0:0:0,-2.10721,-10 0/0:47.3423:12:12:450:0:0:0,-3.61236,-10 0/0:99:38:38:1369:0:0:0,-10,-10 0/1:99:42:21:787:21:663:-10,0,-10 0/0:89.4856:26:26:927:0:0:0,-7.82678,-10 0/0:53.3629:14:14:508:0:0:0,-4.21442,-10 0/0:99:33:33:1239:0:0:0,-9.93399,-10 0/0:17.2393:2:2:72:0:0:0,-0.60206,-6.84 0/0:53.3629:14:14:527:0:0:0,-4.21442,-10 0/0:41.3217:10:10:366:0:0:0,-3.0103,-10 0/0:38.3114:9:9:331:0:0:0,-2.70927,-10 0/0:0.567351:15:14:522:1:38:-0.460641,0,-10 0/0:65.4041:18:18:645:0:0:0,-5.41854,-10 0/0:68.4144:19:19:708:0:0:0,-5.71957,-10 scaffold_181 1597047 . G A 409.013 . AB=1;ABP=39.9253;AC=1;AF=0.00543478;AN=184;AO=18;CIGAR=1X;DP=1497;DPB=1497;DPRA=1.33081;EPP=3.0103;EPPR=17.4002;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9696;NS=92;NUMALT=1;ODDS=0.160105;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=656;QR=54346;RO=1479;RPP=33.8935;RPPR=3051.71;RUN=1;SAF=8;SAP=3.49285;SAR=10;SRF=770;SRP=8.47348;SRR=709;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.5686:14:14:517:0:0:0,-4.21442,-10 0/0:39.5171:9:9:322:0:0:0,-2.70927,-10 0/0:42.5274:10:10:375:0:0:0,-3.0103,-10 0/0:54.5686:14:14:506:0:0:0,-4.21442,-10 0/0:45.5377:11:11:416:0:0:0,-3.31133,-10 0/0:30.4862:6:6:219:0:0:0,-1.80618,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:30.4862:6:6:191:0:0:0,-1.80618,-10 0/0:36.5068:8:8:302:0:0:0,-2.40824,-10 0/0:30.4862:6:6:226:0:0:0,-1.80618,-10 0/0:30.4862:6:6:213:0:0:0,-1.80618,-10 0/0:64.2004:26:25:934:1:16:0,-4.81181,-10 0/0:93.702:27:27:975:0:0:0,-8.12781,-10 0/0:87.6817:25:25:918:0:0:0,-7.52575,-10 0/0:90.6919:26:26:965:0:0:0,-7.82678,-10 0/0:60.5892:16:16:598:0:0:0,-4.81648,-10 0/0:48.548:12:12:433:0:0:0,-3.61236,-10 0/0:63.5995:17:17:611:0:0:0,-5.11751,-10 0/0:99:35:35:1280:0:0:0,-10,-10 0/0:60.5892:16:16:578:0:0:0,-4.81648,-10 0/0:84.6715:24:24:874:0:0:0,-7.22472,-10 0/0:57.5789:15:15:550:0:0:0,-4.51545,-10 0/0:60.5892:16:16:591:0:0:0,-4.81648,-10 0/0:66.6098:18:18:657:0:0:0,-5.41854,-10 0/0:87.6817:25:25:928:0:0:0,-7.52575,-10 0/0:45.5377:11:11:404:0:0:0,-3.31133,-10 0/0:48.548:12:12:456:0:0:0,-3.61236,-10 0/0:48.548:12:12:414:0:0:0,-3.61236,-10 0/0:84.6715:24:24:861:0:0:0,-7.22472,-10 0/0:39.5171:9:9:342:0:0:0,-2.70927,-10 0/0:48.548:12:12:446:0:0:0,-3.61236,-10 0/0:63.5995:17:17:611:0:0:0,-5.11751,-10 0/0:36.5068:8:8:299:0:0:0,-2.40824,-10 0/0:66.6098:18:18:665:0:0:0,-5.41854,-10 0/0:33.4965:7:7:263:0:0:0,-2.10721,-10 0/0:60.5892:16:16:586:0:0:0,-4.81648,-10 0/0:96.7095:28:28:1014:0:0:0,-8.42884,-10 0/0:48.548:12:12:442:0:0:0,-3.61236,-10 0/0:60.5892:16:16:555:0:0:0,-4.81648,-10 0/0:84.6715:24:24:907:0:0:0,-7.22472,-10 0/0:48.548:12:12:425:0:0:0,-3.61236,-10 0/0:51.5583:13:13:485:0:0:0,-3.91339,-10 0/0:90.6919:26:26:941:0:0:0,-7.82678,-10 0/0:54.5686:14:14:526:0:0:0,-4.21442,-10 0/0:60.5892:16:16:603:0:0:0,-4.81648,-10 0/0:87.6817:25:25:948:0:0:0,-7.52575,-10 0/0:99:34:34:1280:0:0:0,-10,-10 0/0:42.5274:10:10:358:0:0:0,-3.0103,-10 0/0:93.702:27:27:1014:0:0:0,-8.12781,-10 0/0:57.5789:15:15:563:0:0:0,-4.51545,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:42.5274:10:10:377:0:0:0,-3.0103,-10 0/0:30.4862:6:6:197:0:0:0,-1.80618,-10 0/0:99:35:35:1284:0:0:0,-10,-10 0/0:33.4965:7:7:263:0:0:0,-2.10721,-10 0/0:54.5686:14:14:517:0:0:0,-4.21442,-10 0/0:48.548:12:12:419:0:0:0,-3.61236,-10 0/0:60.5892:16:16:608:0:0:0,-4.81648,-10 0/0:45.5377:11:11:399:0:0:0,-3.31133,-10 0/0:90.6919:26:26:948:0:0:0,-7.82678,-10 0/0:48.548:12:12:421:0:0:0,-3.61236,-10 0/0:93.702:27:27:978:0:0:0,-8.12781,-10 0/0:51.5583:13:13:489:0:0:0,-3.91339,-10 0/0:48.548:12:12:455:0:0:0,-3.61236,-10 0/0:93.702:27:27:969:0:0:0,-8.12781,-10 0/0:63.5995:17:17:619:0:0:0,-5.11751,-10 0/0:42.5274:10:10:376:0:0:0,-3.0103,-10 0/0:69.6201:19:19:715:0:0:0,-5.71957,-10 0/0:30.4862:6:6:226:0:0:0,-1.80618,-10 0/0:57.5789:15:15:548:0:0:0,-4.51545,-10 0/1:2.61899:17:0:0:17:640:-10,-5.11751,0 0/0:69.6201:19:19:721:0:0:0,-5.71957,-10 0/0:42.5274:10:10:371:0:0:0,-3.0103,-10 0/0:93.702:27:27:984:0:0:0,-8.12781,-10 0/0:60.5892:16:16:606:0:0:0,-4.81648,-10 0/0:33.4965:7:7:249:0:0:0,-2.10721,-10 0/0:48.548:12:12:449:0:0:0,-3.61236,-10 0/0:24.4656:4:4:152:0:0:0,-1.20412,-10 0/0:48.548:12:12:417:0:0:0,-3.61236,-10 0/0:99:32:32:1183:0:0:0,-9.63296,-10 0/0:72.6304:20:20:740:0:0:0,-6.0206,-10 0/0:39.5171:9:9:318:0:0:0,-2.70927,-10 0/0:57.5789:15:15:537:0:0:0,-4.51545,-10 0/0:66.6098:18:18:662:0:0:0,-5.41854,-10 0/0:36.5068:8:8:291:0:0:0,-2.40824,-10 0/0:60.5892:16:16:575:0:0:0,-4.81648,-10 0/0:36.5068:8:8:281:0:0:0,-2.40824,-10 0/0:24.4656:4:4:138:0:0:0,-1.20412,-10 0/0:57.5789:15:15:557:0:0:0,-4.51545,-10 0/0:57.5789:15:15:559:0:0:0,-4.51545,-10 0/0:63.5995:17:17:637:0:0:0,-5.11751,-10 scaffold_186 63668 . C T 641.467 . AB=0.651163;ABP=11.5447;AC=2;AF=0.0108696;AN=184;AO=30;CIGAR=1X;DP=1820;DPB=1820;DPRA=1.40152;EPP=7.64277;EPPR=5.36151;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.981;NS=92;NUMALT=1;ODDS=4.2349;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1058;QR=65253;RO=1788;RPP=68.1545;RPPR=3713.83;RUN=1;SAF=19;SAP=7.64277;SAR=11;SRF=900;SRP=3.18518;SRR=888;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:31.3013:5:5:164:0:0:0,-1.50515,-10 0/0:49.3631:11:11:386:0:0:0,-3.31133,-10 0/0:91.5064:25:25:939:0:0:0,-7.52575,-10 0/0:70.4352:18:18:679:0:0:0,-5.41854,-10 0/0:58.394:14:14:526:0:0:0,-4.21442,-10 0/0:34.3116:6:6:225:0:0:0,-1.80618,-10 0/0:99:34:34:1251:0:0:0,-10,-10 0/0:58.5834:30:29:1091:1:38:0,-3.75378,-10 0/0:49.3631:11:11:410:0:0:0,-3.31133,-10 0/0:34.3116:6:6:214:0:0:0,-1.80618,-10 0/0:31.3013:5:5:189:0:0:0,-1.50515,-10 0/0:25.2807:3:3:111:0:0:0,-0.90309,-10 0/0:99:33:33:1206:0:0:0,-9.93399,-10 0/0:88.4965:24:24:894:0:0:0,-7.22472,-10 0/0:75.8533:36:35:1319:1:38:0,-5.48078,-10 0/0:99:29:29:1099:0:0:0,-8.72987,-10 0/0:76.4558:20:20:751:0:0:0,-6.0206,-10 0/0:37.3219:7:7:264:0:0:0,-2.10721,-10 0/0:82.4764:22:22:819:0:0:0,-6.62266,-10 0/0:99:46:46:1632:0:0:0,-10,-10 0/0:76.4558:20:20:727:0:0:0,-6.0206,-10 0/0:88.4965:24:24:887:0:0:0,-7.22472,-10 0/0:40.3322:8:8:304:0:0:0,-2.40824,-10 0/0:70.4352:18:18:668:0:0:0,-5.41854,-10 0/0:88.4965:24:24:890:0:0:0,-7.22472,-10 0/0:94.5158:26:26:942:0:0:0,-7.82678,-10 0/0:73.4455:19:19:698:0:0:0,-5.71957,-10 0/0:49.3631:11:11:394:0:0:0,-3.31133,-10 0/0:76.4558:20:20:676:0:0:0,-6.0206,-10 0/0:99:36:36:1359:0:0:0,-10,-10 0/0:31.3013:5:5:163:0:0:0,-1.50515,-10 0/0:37.3219:7:7:228:0:0:0,-2.10721,-10 0/0:99:31:31:1060:0:0:0,-9.33193,-10 0/0:37.3219:7:7:266:0:0:0,-2.10721,-10 0/0:58.394:14:14:505:0:0:0,-4.21442,-10 0/0:34.3116:6:6:227:0:0:0,-1.80618,-10 0/0:52.3734:12:12:455:0:0:0,-3.61236,-10 0/0:88.4965:24:24:907:0:0:0,-7.22472,-10 0/0:67.4249:17:17:636:0:0:0,-5.11751,-10 0/0:73.4455:19:19:717:0:0:0,-5.71957,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:97.5242:28:27:987:0:0:0,-8.12781,-10 0/0:64.4146:16:16:579:0:0:0,-4.81648,-10 0/0:99:30:30:1056:0:0:0,-9.0309,-10 0/0:76.4558:20:20:720:0:0:0,-6.0206,-10 0/0:61.4043:15:15:530:0:0:0,-4.51545,-10 0/0:99:48:48:1708:0:0:0,-10,-10 0/0:99:29:29:1036:0:0:0,-8.72987,-10 0/0:73.4455:19:19:682:0:0:0,-5.71957,-10 0/0:99:35:35:1259:0:0:0,-10,-10 0/0:64.4146:16:16:603:0:0:0,-4.81648,-10 0/0:88.4965:24:24:877:0:0:0,-7.22472,-10 0/0:52.3734:12:12:434:0:0:0,-3.61236,-10 0/0:37.3219:7:7:255:0:0:0,-2.10721,-10 0/0:99:35:35:1230:0:0:0,-10,-10 0/0:64.4146:16:16:548:0:0:0,-4.81648,-10 0/0:82.4764:22:22:790:0:0:0,-6.62266,-10 0/0:46.3528:10:10:356:0:0:0,-3.0103,-10 0/0:76.4558:21:20:738:0:0:0,-6.0206,-10 0/0:64.4146:16:16:565:0:0:0,-4.81648,-10 0/0:79.466:21:21:795:0:0:0,-6.32163,-10 0/0:70.4352:18:18:658:0:0:0,-5.41854,-10 0/0:99:35:35:1254:0:0:0,-10,-10 0/0:91.5064:25:25:902:0:0:0,-7.52575,-10 0/0:46.3528:10:10:379:0:0:0,-3.0103,-10 0/0:67.4249:17:17:646:0:0:0,-5.11751,-10 0/1:99:27:15:566:12:435:-10,0,-10 0/0:37.3219:7:7:251:0:0:0,-2.10721,-10 0/0:99:40:40:1414:0:0:0,-10,-10 0/0:52.3734:12:12:444:0:0:0,-3.61236,-10 0/0:70.4352:18:18:651:0:0:0,-5.41854,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:70.4352:18:18:646:0:0:0,-5.41854,-10 0/0:49.3631:11:11:402:0:0:0,-3.31133,-10 0/0:99:29:29:1036:0:0:0,-8.72987,-10 0/0:61.4043:15:15:559:0:0:0,-4.51545,-10 0/0:46.3528:10:10:328:0:0:0,-3.0103,-10 0/0:85.4865:23:23:849:0:0:0,-6.92369,-10 0/0:31.3013:5:5:186:0:0:0,-1.50515,-10 0/0:49.3631:11:11:396:0:0:0,-3.31133,-10 0/0:99:33:33:1244:0:0:0,-9.93399,-10 0/0:99:33:33:1220:0:0:0,-9.93399,-10 0/0:88.4965:24:24:868:0:0:0,-7.22472,-10 0/0:85.4865:23:23:846:0:0:0,-6.92369,-10 0/0:79.466:21:21:763:0:0:0,-6.32163,-10 0/0:37.3219:7:7:252:0:0:0,-2.10721,-10 0/0:70.4352:18:18:664:0:0:0,-5.41854,-10 0/1:0.061912:16:0:0:16:547:-10,-4.81648,0 0/0:55.3837:13:13:485:0:0:0,-3.91339,-10 0/0:73.4455:19:19:703:0:0:0,-5.71957,-10 0/0:94.5158:26:26:970:0:0:0,-7.82678,-10 0/0:64.4146:16:16:586:0:0:0,-4.81648,-10 scaffold_186 133695 . G C 1193.92 . AB=0.72973;ABP=19.9713;AC=5;AF=0.0271739;AN=184;AO=48;CIGAR=1X;DP=1309;DPB=1309;DPRA=1.01998;EPP=4.6389;EPPR=3.45149;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9492;NS=92;NUMALT=1;ODDS=3.48665;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1760;QR=45262;RO=1260;RPP=107.241;RPPR=2739.07;RUN=1;SAF=27;SAP=4.6389;SAR=21;SRF=622;SRP=3.45149;SRR=638;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.9044:13:13:448:0:0:0,-3.91339,-10 0/0:57.9353:16:16:545:0:0:0,-4.81648,-10 0/0:54.925:15:15:532:0:0:0,-4.51545,-10 0/0:39.8735:10:10:376:0:0:0,-3.0103,-10 0/0:42.8838:11:11:405:0:0:0,-3.31133,-10 0/0:15.7911:2:2:52:0:0:0,-0.60206,-4.94 0/0:88.0381:26:26:867:0:0:0,-7.82678,-10 0/0:91.0482:27:27:1020:0:0:0,-8.12781,-10 0/0:42.8838:11:11:416:0:0:0,-3.31133,-10 0/0:33.8529:8:8:281:0:0:0,-2.40824,-10 0/0:27.8323:6:6:214:0:0:0,-1.80618,-10 0/0:18.8014:3:3:102:0:0:0,-0.90309,-9.52 0/0:66.9662:19:19:674:0:0:0,-5.71957,-10 0/0:97.0674:29:29:1041:0:0:0,-8.72987,-10 0/0:33.8529:8:8:279:0:0:0,-2.40824,-10 0/0:60.9456:17:17:637:0:0:0,-5.11751,-10 0/0:79.0074:23:23:790:0:0:0,-6.92369,-10 0/0:42.8838:11:11:416:0:0:0,-3.31133,-10 0/0:39.8735:10:10:349:0:0:0,-3.0103,-10 0/0:88.0381:26:26:915:0:0:0,-7.82678,-10 0/0:42.8838:11:11:399:0:0:0,-3.31133,-10 0/0:85.0279:25:25:886:0:0:0,-7.52575,-10 0/0:30.8426:7:7:248:0:0:0,-2.10721,-10 0/0:69.9765:20:20:755:0:0:0,-6.0206,-10 0/0:48.9044:13:13:422:0:0:0,-3.91339,-10 0/0:60.9456:17:17:601:0:0:0,-5.11751,-10 0/0:30.8426:7:7:248:0:0:0,-2.10721,-10 0/0:33.8529:8:8:304:0:0:0,-2.40824,-10 0/0:39.8735:10:10:365:0:0:0,-3.0103,-10 0/0:85.0279:26:25:843:0:0:0,-7.52575,-10 0/0:21.8117:4:4:152:0:0:0,-1.20412,-10 0/0:27.8323:6:6:205:0:0:0,-1.80618,-10 0/0:36.8632:9:9:341:0:0:0,-2.70927,-10 0/0:36.8632:9:9:341:0:0:0,-2.70927,-10 1/1:19.5654:21:0:0:21:771:-10,-6.32163,0 0/0:24.822:5:5:190:0:0:0,-1.50515,-10 0/1:0.0186156:9:0:0:9:342:-10,-2.70927,0 0/1:99:23:9:309:14:518:-10,0,-10 0/0:79.0074:23:23:841:0:0:0,-6.92369,-10 0/1:77.3324:5:1:38:4:129:-10,0,-2.99382 0/0:88.0381:26:26:943:0:0:0,-7.82678,-10 0/0:33.8529:8:8:285:0:0:0,-2.40824,-10 0/0:36.8632:9:9:319:0:0:0,-2.70927,-10 0/0:54.925:15:15:560:0:0:0,-4.51545,-10 0/0:63.9559:18:18:646:0:0:0,-5.41854,-10 0/0:48.9044:13:13:467:0:0:0,-3.91339,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:66.9662:19:19:651:0:0:0,-5.71957,-10 0/0:42.8838:11:11:415:0:0:0,-3.31133,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 0/0:45.8941:12:12:406:0:0:0,-3.61236,-10 0/0:63.9559:18:18:664:0:0:0,-5.41854,-10 0/0:42.8838:11:11:417:0:0:0,-3.31133,-10 0/0:15.7911:2:2:76:0:0:0,-0.60206,-7.22 0/0:75.9971:22:22:760:0:0:0,-6.62266,-10 0/0:33.8529:8:8:300:0:0:0,-2.40824,-10 0/0:72.9868:21:21:775:0:0:0,-6.32163,-10 0/0:36.8632:9:9:304:0:0:0,-2.70927,-10 0/0:42.8838:11:11:364:0:0:0,-3.31133,-10 0/0:18.8014:3:3:109:0:0:0,-0.90309,-10 0/0:69.9765:20:20:732:0:0:0,-6.0206,-10 0/0:36.8632:9:9:328:0:0:0,-2.70927,-10 0/0:94.058:28:28:1026:0:0:0,-8.42884,-10 0/0:54.925:15:15:534:0:0:0,-4.51545,-10 0/0:39.8735:10:10:329:0:0:0,-3.0103,-10 0/0:99:30:30:1081:0:0:0,-9.0309,-10 0/0:60.9456:17:17:624:0:0:0,-5.11751,-10 0/0:24.822:5:5:186:0:0:0,-1.50515,-10 0/0:88.0381:26:26:905:0:0:0,-7.82678,-10 0/0:42.8838:11:11:399:0:0:0,-3.31133,-10 0/0:51.9147:14:14:475:0:0:0,-4.21442,-10 0/0:66.9662:19:19:709:0:0:0,-5.71957,-10 0/0:63.9559:18:18:664:0:0:0,-5.41854,-10 0/0:33.8529:8:8:289:0:0:0,-2.40824,-10 0/0:51.9147:14:14:509:0:0:0,-4.21442,-10 0/0:45.8941:12:12:426:0:0:0,-3.61236,-10 0/0:39.8735:10:10:343:0:0:0,-3.0103,-10 0/0:42.8838:11:11:391:0:0:0,-3.31133,-10 0/0:24.822:5:5:185:0:0:0,-1.50515,-10 0/0:36.8632:9:9:327:0:0:0,-2.70927,-10 0/0:79.0074:23:23:850:0:0:0,-6.92369,-10 0/0:51.9147:14:14:489:0:0:0,-4.21442,-10 0/0:48.9044:13:13:483:0:0:0,-3.91339,-10 0/0:69.9765:20:20:701:0:0:0,-6.0206,-10 0/0:63.9559:18:18:674:0:0:0,-5.41854,-10 0/0:18.8014:3:3:111:0:0:0,-0.90309,-10 0/0:54.925:15:15:547:0:0:0,-4.51545,-10 0/0:66.9662:19:19:690:0:0:0,-5.71957,-10 0/0:27.8323:6:6:228:0:0:0,-1.80618,-10 0/0:69.9765:20:20:726:0:0:0,-6.0206,-10 0/0:51.9147:14:14:528:0:0:0,-4.21442,-10 0/0:24.822:5:5:188:0:0:0,-1.50515,-10 scaffold_186 133709 . G A 1584.52 . AB=0.605769;ABP=13.116;AC=7;AF=0.0380435;AN=184;AO=64;CIGAR=1X;DP=1311;DPB=1311;DPRA=1.07738;EPP=3.14602;EPPR=4.1884;GTI=3;LEN=1;MEANALT=1;MQM=59.625;MQMR=59.9679;NS=92;NUMALT=1;ODDS=2.66975;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2318;QR=45338;RO=1246;RPP=141.985;RPPR=2656.8;RUN=1;SAF=33;SAP=3.14602;SAR=31;SRF=616;SRP=3.35188;SRR=630;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:51.2567:13:13:474:0:0:0,-3.91339,-10 0/0:60.2876:16:16:553:0:0:0,-4.81648,-10 0/1:99:15:4:126:11:412:-10,0,-10 0/0:42.2258:10:10:378:0:0:0,-3.0103,-10 0/0:45.2361:11:11:412:0:0:0,-3.31133,-10 0/0:18.1434:2:2:54:0:0:0,-0.60206,-5.13 0/0:90.3902:26:26:949:0:0:0,-7.82678,-10 0/0:93.4012:27:27:996:0:0:0,-8.12781,-10 0/0:45.2361:11:11:418:0:0:0,-3.31133,-10 0/0:36.2052:8:8:303:0:0:0,-2.40824,-10 0/0:30.1846:6:6:227:0:0:0,-1.80618,-10 0/0:21.1537:3:3:102:0:0:0,-0.90309,-9.52 0/0:69.3185:19:19:716:0:0:0,-5.71957,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:36.2052:8:8:281:0:0:0,-2.40824,-10 0/0:63.2979:17:17:640:0:0:0,-5.11751,-10 0/0:81.3597:23:23:828:0:0:0,-6.92369,-10 0/0:45.2361:11:11:418:0:0:0,-3.31133,-10 0/0:42.2258:10:10:380:0:0:0,-3.0103,-10 0/0:90.3902:26:26:951:0:0:0,-7.82678,-10 0/1:99:11:6:215:5:168:-10,0,-10 0/1:99:25:15:544:10:380:-10,0,-10 0/0:33.1949:7:7:250:0:0:0,-2.10721,-10 0/0:72.3288:20:20:755:0:0:0,-6.0206,-10 0/0:51.2567:13:13:473:0:0:0,-3.91339,-10 0/0:63.2979:17:17:619:0:0:0,-5.11751,-10 0/0:33.1949:7:7:264:0:0:0,-2.10721,-10 0/0:36.2052:8:8:299:0:0:0,-2.40824,-10 0/0:42.2258:10:10:342:0:0:0,-3.0103,-10 0/0:90.3902:26:26:967:0:0:0,-7.82678,-10 0/0:24.164:4:4:150:0:0:0,-1.20412,-10 0/0:30.1846:6:6:202:0:0:0,-1.80618,-10 0/0:39.2155:9:9:333:0:0:0,-2.70927,-10 0/0:39.2155:9:9:340:0:0:0,-2.70927,-10 0/0:75.3391:21:21:791:0:0:0,-6.32163,-10 0/1:0.00203163:5:0:0:5:189:-10,-1.50515,0 0/0:39.2155:9:9:330:0:0:0,-2.70927,-10 0/0:81.3597:23:23:869:0:0:0,-6.92369,-10 0/0:81.3597:23:23:854:0:0:0,-6.92369,-10 0/0:27.1743:5:5:168:0:0:0,-1.50515,-10 0/0:90.3902:26:26:951:0:0:0,-7.82678,-10 0/1:0.0162798:8:0:0:8:281:-10,-2.40824,0 0/0:39.2155:9:9:336:0:0:0,-2.70927,-10 0/0:57.2773:15:15:539:0:0:0,-4.51545,-10 0/0:41.5394:18:17:608:1:16:0,-2.56327,-10 0/0:51.2567:13:13:468:0:0:0,-3.91339,-10 0/0:99:33:32:1198:0:0:0,-9.63296,-10 0/0:69.3185:19:19:666:0:0:0,-5.71957,-10 0/0:48.2464:12:12:408:0:0:0,-3.61236,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/1:0.268096:12:0:0:12:443:-10,-3.61236,0 0/0:66.3082:18:18:666:0:0:0,-5.41854,-10 0/0:45.2361:11:11:417:0:0:0,-3.31133,-10 0/0:18.1434:2:2:53:0:0:0,-0.60206,-5.035 0/0:78.3494:22:22:741:0:0:0,-6.62266,-10 0/0:36.2052:8:8:300:0:0:0,-2.40824,-10 0/0:75.3391:21:21:766:0:0:0,-6.32163,-10 0/0:39.2155:9:9:326:0:0:0,-2.70927,-10 0/0:45.2361:11:11:380:0:0:0,-3.31133,-10 0/0:21.1537:3:3:109:0:0:0,-0.90309,-10 0/0:75.3391:21:21:743:0:0:0,-6.32163,-10 0/0:39.2155:9:9:340:0:0:0,-2.70927,-10 0/1:99:28:16:570:12:429:-10,0,-10 0/0:57.2773:15:15:561:0:0:0,-4.51545,-10 0/0:42.2258:10:10:307:0:0:0,-3.0103,-10 0/0:99:30:30:1084:0:0:0,-9.0309,-10 0/0:63.2979:17:17:639:0:0:0,-5.11751,-10 0/0:27.1743:5:5:183:0:0:0,-1.50515,-10 0/0:90.3902:26:26:937:0:0:0,-7.82678,-10 0/0:45.2361:11:11:396:0:0:0,-3.31133,-10 0/0:54.267:14:14:499:0:0:0,-4.21442,-10 0/0:69.3185:19:19:714:0:0:0,-5.71957,-10 0/0:66.3082:18:18:665:0:0:0,-5.41854,-10 0/0:36.2052:8:8:271:0:0:0,-2.40824,-10 0/0:54.267:14:14:506:0:0:0,-4.21442,-10 0/0:48.2464:12:12:440:0:0:0,-3.61236,-10 0/0:42.2258:10:10:353:0:0:0,-3.0103,-10 0/0:45.2361:11:11:396:0:0:0,-3.31133,-10 0/0:27.1743:5:5:187:0:0:0,-1.50515,-10 0/0:39.2155:9:9:319:0:0:0,-2.70927,-10 0/0:81.3597:23:23:842:0:0:0,-6.92369,-10 0/0:54.267:14:14:507:0:0:0,-4.21442,-10 0/0:51.2567:13:13:464:0:0:0,-3.91339,-10 0/0:72.3288:20:20:722:0:0:0,-6.0206,-10 0/0:66.3082:18:18:654:0:0:0,-5.41854,-10 0/0:21.1537:3:3:113:0:0:0,-0.90309,-10 0/0:57.2773:15:15:553:0:0:0,-4.51545,-10 0/0:69.3185:19:19:712:0:0:0,-5.71957,-10 0/0:30.1846:6:6:215:0:0:0,-1.80618,-10 0/0:72.3288:20:20:719:0:0:0,-6.0206,-10 0/0:54.267:14:14:479:0:0:0,-4.21442,-10 0/0:27.1743:5:5:177:0:0:0,-1.50515,-10 scaffold_186 139877 . C T 51641.5 . AB=0.371429;ABP=28.1373;AC=161;AF=0.875;AN=184;AO=1749;CIGAR=1X;DP=2065;DPB=2065;DPRA=0.822179;EPP=3.55782;EPPR=3.18374;GTI=5;LEN=1;MEANALT=1.03614;MQM=59.8856;MQMR=60;NS=92;NUMALT=1;ODDS=0.527653;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63752;QR=11435;RO=313;RPP=3800.92;RPPR=682.681;RUN=1;SAF=885;SAP=3.55782;SAR=864;SRF=159;SRP=3.18374;SRR=154;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:49.9735:17:0:0:17:620:-10,-5.11751,0 1/1:31.9117:11:0:0:11:388:-10,-3.31133,0 1/1:92.1176:31:0:0:31:1145:-10,-9.33193,0 0/1:0.289832:22:21:792:1:38:0,-1.48024,-10 1/1:34.922:12:0:0:12:449:-10,-3.61236,0 1/1:13.8499:5:0:0:5:188:-10,-1.50515,0 1/1:99:42:0:0:42:1514:-10,-10,0 1/1:86.0967:29:0:0:29:1065:-10,-8.72987,0 1/1:52.9838:18:0:0:18:675:-10,-5.41854,0 1/1:7.82929:3:0:0:3:111:-10,-0.90309,0 1/1:16.8602:6:0:0:6:204:-10,-1.80618,0 1/1:16.8602:6:0:0:6:203:-10,-1.80618,0 1/1:99:43:0:0:42:1541:-10,-10,0 1/1:99:45:0:0:45:1621:-10,-10,0 1/1:83.0866:28:0:0:28:993:-10,-8.42884,0 1/1:83.0866:28:0:0:28:1046:-10,-8.42884,0 1/1:62.0147:21:0:0:21:780:-10,-6.32163,0 1/1:46.9632:16:0:0:16:525:-10,-4.81648,0 1/1:77.0661:26:0:0:26:964:-10,-7.82678,0 1/1:99:44:0:0:44:1544:-10,-10,0 1/1:83.0866:28:0:0:28:1038:-10,-8.42884,0 1/1:99:47:0:0:47:1705:-10,-10,0 1/1:13.8499:5:0:0:5:190:-10,-1.50515,0 1/1:86.0967:29:0:0:29:1063:-10,-8.72987,0 1/1:95.1245:33:0:0:32:1187:-10,-9.63296,0 1/1:71.0456:24:0:0:24:885:-10,-7.22472,0 1/1:83.0866:28:0:0:28:1010:-10,-8.42884,0 1/1:46.9632:16:0:0:16:598:-10,-4.81648,0 1/1:68.0353:23:0:0:23:822:-10,-6.92369,0 1/1:99:43:0:0:43:1544:-10,-10,0 1/1:28.9014:10:0:0:10:375:-10,-3.0103,0 1/1:31.9117:11:0:0:11:411:-10,-3.31133,0 1/1:71.0456:24:0:0:24:884:-10,-7.22472,0 1/1:25.8911:9:0:0:9:341:-10,-2.70927,0 1/1:68.0353:23:0:0:23:849:-10,-6.92369,0 1/1:19.8705:7:0:0:7:240:-10,-2.10721,0 1/1:52.9838:18:0:0:18:668:-10,-5.41854,0 1/1:99:39:0:0:39:1440:-10,-10,0 1/1:49.9735:17:0:0:17:601:-10,-5.11751,0 1/1:46.9632:16:0:0:16:550:-10,-4.81648,0 1/1:99:35:0:0:35:1277:-10,-10,0 1/1:49.9735:17:0:0:17:615:-10,-5.11751,0 1/1:83.0866:29:0:0:28:1038:-10,-8.42884,0 1/1:92.1176:31:0:0:31:1120:-10,-9.33193,0 1/1:71.0456:24:0:0:24:853:-10,-7.22472,0 1/1:65.025:22:0:0:22:829:-10,-6.62266,0 1/1:99:47:0:0:47:1746:-10,-10,0 1/1:68.0353:23:0:0:23:832:-10,-6.92369,0 1/1:59.0044:20:0:0:20:721:-10,-6.0206,0 0/1:99:46:21:795:25:904:-10,0,-10 1/1:52.9838:18:0:0:18:641:-10,-5.41854,0 1/1:92.1176:31:0:0:31:1171:-10,-9.33193,0 1/1:25.8911:9:0:0:9:313:-10,-2.70927,0 1/1:31.9117:11:0:0:11:370:-10,-3.31133,0 1/1:99:44:0:0:44:1584:-10,-10,0 1/1:49.9735:17:0:0:17:617:-10,-5.11751,0 1/1:86.0967:29:0:0:29:1033:-10,-8.72987,0 1/1:37.9323:13:0:0:13:488:-10,-3.91339,0 1/1:49.9735:17:0:0:17:620:-10,-5.11751,0 1/1:37.9323:13:0:0:13:472:-10,-3.91339,0 0/1:99:32:15:567:17:593:-10,0,-10 0/0:55.7258:23:23:847:0:0:0,-6.92369,-10 1/1:99:36:0:0:36:1327:-10,-10,0 0/1:99:21:14:530:7:265:-10,0,-10 1/1:22.8808:8:0:0:8:299:-10,-2.40824,0 1/1:65.025:22:0:0:22:801:-10,-6.62266,0 1/1:46.9632:16:0:0:16:572:-10,-4.81648,0 1/1:40.9426:14:0:0:14:532:-10,-4.21442,0 0/1:99:38:25:892:13:478:-10,0,-10 0/1:0.639268:7:7:232:0:0:0,-2.10721,-10 0/0:73.7876:29:29:1034:0:0:0,-8.72987,-10 0/0:70.7773:28:28:1029:0:0:0,-8.42884,-10 0/0:70.7773:28:28:1006:0:0:0,-8.42884,-10 0/0:37.664:17:17:631:0:0:0,-5.11751,-10 0/0:82.8185:32:32:1143:0:0:0,-9.63296,-10 0/1:0.541569:15:14:525:1:16:0,-1.73936,-10 1/1:40.9426:14:0:0:14:525:-10,-4.21442,0 1/1:46.9632:16:0:0:16:598:-10,-4.81648,0 1/1:28.9014:10:0:0:10:380:-10,-3.0103,0 1/1:31.9117:11:0:0:11:408:-10,-3.31133,0 1/1:80.0765:27:0:0:27:989:-10,-8.12781,0 1/1:99:35:0:0:35:1317:-10,-10,0 1/1:77.0661:26:0:0:26:925:-10,-7.82678,0 1/1:86.0967:29:0:0:29:1059:-10,-8.72987,0 0/0:88.8391:34:34:1222:0:0:0,-10,-10 0/1:0.233035:1:0:0:1:38:-3.8,-0.30103,0 1/1:46.9632:16:0:0:16:558:-10,-4.81648,0 1/1:43.9529:15:0:0:15:547:-10,-4.51545,0 0/1:0.151214:5:5:190:0:0:0,-1.50515,-10 1/1:59.0044:20:0:0:20:746:-10,-6.0206,0 1/1:74.0559:25:0:0:25:928:-10,-7.52575,0 1/1:46.9632:16:0:0:16:592:-10,-4.81648,0 scaffold_186 484300 . A G 435.154 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=19;CIGAR=1X;DP=1399;DPB=1399;DPRA=1.94631;EPP=5.8675;EPPR=4.0771;GTI=0;LEN=1;MEANALT=1;MQM=59.3158;MQMR=59.9586;NS=92;NUMALT=1;ODDS=2.3575;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=667;QR=51182;RO=1376;RPP=44.2683;RPPR=2973.61;RUN=1;SAF=7;SAP=5.8675;SAR=12;SRF=703;SRP=4.43059;SRR=673;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.8813:20:20:746:0:0:0,-6.0206,-10 0/0:35.7783:10:10:377:0:0:0,-3.0103,-10 0/0:47.8195:14:14:532:0:0:0,-4.21442,-10 0/0:47.8195:14:14:521:0:0:0,-4.21442,-10 0/0:26.7474:7:7:264:0:0:0,-2.10721,-10 0/0:62.871:19:19:705:0:0:0,-5.71957,-10 0/0:80.9329:25:25:934:0:0:0,-7.52575,-10 0/0:71.9019:22:22:834:0:0:0,-6.62266,-10 0/0:29.7577:8:8:290:0:0:0,-2.40824,-10 0/0:26.7474:7:7:266:0:0:0,-2.10721,-10 0/0:11.6959:2:2:76:0:0:0,-0.60206,-7.22 0/0:32.768:9:9:341:0:0:0,-2.70927,-10 0/0:71.9019:22:22:822:0:0:0,-6.62266,-10 0/0:68.8916:21:21:785:0:0:0,-6.32163,-10 0/0:65.8813:20:20:731:0:0:0,-6.0206,-10 0/0:59.8607:18:18:677:0:0:0,-5.41854,-10 0/0:65.8813:20:20:731:0:0:0,-6.0206,-10 0/0:29.7577:8:8:304:0:0:0,-2.40824,-10 0/0:65.8813:20:20:731:0:0:0,-6.0206,-10 0/0:99:33:32:1164:0:0:0,-9.63296,-10 0/0:50.8298:15:15:548:0:0:0,-4.51545,-10 0/0:74.9122:23:23:844:0:0:0,-6.92369,-10 0/0:20.7268:5:5:167:0:0:0,-1.50515,-10 0/0:59.8607:18:18:674:0:0:0,-5.41854,-10 0/0:47.8195:14:14:518:0:0:0,-4.21442,-10 0/0:92.9744:29:29:1091:0:0:0,-8.72987,-10 0/0:68.8916:21:21:788:0:0:0,-6.32163,-10 0/0:41.7989:12:12:452:0:0:0,-3.61236,-10 0/0:35.7783:10:10:377:0:0:0,-3.0103,-10 0/0:95.9832:30:30:1132:0:0:0,-9.0309,-10 0/0:11.6959:2:2:76:0:0:0,-0.60206,-7.22 0/0:35.7783:10:10:357:0:0:0,-3.0103,-10 0/0:53.8401:16:16:581:0:0:0,-4.81648,-10 0/0:47.8195:14:14:511:0:0:0,-4.21442,-10 0/0:41.7989:12:12:456:0:0:0,-3.61236,-10 0/0:23.7371:6:6:213:0:0:0,-1.80618,-10 0/0:35.7783:10:10:373:0:0:0,-3.0103,-10 0/0:80.9329:25:25:944:0:0:0,-7.52575,-10 0/0:50.8298:15:15:562:0:0:0,-4.51545,-10 0/0:35.7783:10:10:344:0:0:0,-3.0103,-10 0/0:74.9122:23:23:824:0:0:0,-6.92369,-10 0/0:71.9019:22:22:828:0:0:0,-6.62266,-10 0/0:44.8092:13:13:471:0:0:0,-3.91339,-10 0/0:65.8813:20:20:759:0:0:0,-6.0206,-10 0/0:50.8298:15:15:568:0:0:0,-4.51545,-10 0/0:50.8298:15:15:566:0:0:0,-4.51545,-10 0/0:98.9924:31:31:1146:0:0:0,-9.33193,-10 0/0:53.8401:17:16:606:0:0:0,-4.81648,-10 0/0:35.7783:10:10:374:0:0:0,-3.0103,-10 0/0:65.8813:21:20:726:0:0:0,-6.0206,-10 0/0:35.7783:10:10:362:0:0:0,-3.0103,-10 0/0:68.8916:21:21:752:0:0:0,-6.32163,-10 0/0:50.8298:15:15:545:0:0:0,-4.51545,-10 0/0:29.7577:8:8:301:0:0:0,-2.40824,-10 0/0:49.4968:22:21:795:1:15:0,-3.78024,-10 0/0:35.7783:10:10:377:0:0:0,-3.0103,-10 0/0:38.7886:11:11:414:0:0:0,-3.31133,-10 0/0:32.768:9:9:340:0:0:0,-2.70927,-10 0/0:29.7577:8:8:304:0:0:0,-2.40824,-10 0/0:29.7577:8:8:299:0:0:0,-2.40824,-10 0/0:59.8607:18:18:653:0:0:0,-5.41854,-10 0/0:62.871:19:19:700:0:0:0,-5.71957,-10 0/1:99:36:18:674:18:652:-10,0,-10 0/0:47.8195:14:14:509:0:0:0,-4.21442,-10 0/0:35.7783:10:10:367:0:0:0,-3.0103,-10 0/0:86.9533:27:27:1019:0:0:0,-8.12781,-10 0/0:50.8298:15:15:561:0:0:0,-4.51545,-10 0/0:26.7474:7:7:260:0:0:0,-2.10721,-10 0/0:77.9225:24:24:898:0:0:0,-7.22472,-10 0/0:32.768:9:9:341:0:0:0,-2.70927,-10 0/0:38.7886:12:11:409:0:0:0,-3.31133,-10 0/0:92.9744:29:29:1084:0:0:0,-8.72987,-10 0/0:59.8607:18:18:671:0:0:0,-5.41854,-10 0/0:23.7371:6:6:226:0:0:0,-1.80618,-10 0/0:53.8401:16:16:603:0:0:0,-4.81648,-10 0/0:62.871:19:19:715:0:0:0,-5.71957,-10 0/0:35.7783:10:10:380:0:0:0,-3.0103,-10 0/0:20.7268:5:5:174:0:0:0,-1.50515,-10 0/0:11.6959:2:2:76:0:0:0,-0.60206,-7.22 0/0:29.7577:8:8:302:0:0:0,-2.40824,-10 0/0:71.9019:22:22:831:0:0:0,-6.62266,-10 0/0:62.871:19:19:721:0:0:0,-5.71957,-10 0/0:44.8092:13:13:483:0:0:0,-3.91339,-10 0/0:35.7783:10:10:372:0:0:0,-3.0103,-10 0/0:92.9744:29:29:1084:0:0:0,-8.72987,-10 0/0:35.7783:10:10:379:0:0:0,-3.0103,-10 0/0:14.7062:3:3:105:0:0:0,-0.90309,-9.8 0/0:32.768:9:9:319:0:0:0,-2.70927,-10 0/0:23.7371:6:6:228:0:0:0,-1.80618,-10 0/0:59.8607:18:18:677:0:0:0,-5.41854,-10 0/0:47.8195:14:14:530:0:0:0,-4.21442,-10 0/0:56.8504:17:17:635:0:0:0,-5.11751,-10 scaffold_186 484333 . G C 1281.13 . AB=0.571429;ABP=4.56135;AC=6;AF=0.0326087;AN=184;AO=54;CIGAR=1X;DP=1392;DPB=1392;DPRA=1.14739;EPP=13.3047;EPPR=4.3762;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.923;NS=92;NUMALT=1;ODDS=0.209527;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1931;QR=48898;RO=1337;RPP=120.27;RPPR=2906.27;RUN=1;SAF=19;SAP=13.3047;SAR=35;SRF=683;SRP=4.3762;SRR=654;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.1213:20:20:689:0:0:0,-6.0206,-10 0/0:40.0183:10:10:376:0:0:0,-3.0103,-10 0/0:52.0595:14:14:522:0:0:0,-4.21442,-10 0/0:52.0595:14:14:506:0:0:0,-4.21442,-10 0/0:30.9874:7:7:263:0:0:0,-2.10721,-10 0/0:67.111:19:19:705:0:0:0,-5.71957,-10 0/0:85.1727:25:25:925:0:0:0,-7.52575,-10 0/0:76.1419:22:22:778:0:0:0,-6.62266,-10 0/0:33.9977:8:8:280:0:0:0,-2.40824,-10 0/0:30.9874:7:7:266:0:0:0,-2.10721,-10 0/0:15.9359:2:2:76:0:0:0,-0.60206,-7.22 0/0:37.008:9:9:320:0:0:0,-2.70927,-10 0/0:76.1419:22:22:822:0:0:0,-6.62266,-10 0/0:73.1316:21:21:752:0:0:0,-6.32163,-10 0/0:67.111:19:19:696:0:0:0,-5.71957,-10 0/0:64.1007:18:18:674:0:0:0,-5.41854,-10 0/0:70.1213:20:20:729:0:0:0,-6.0206,-10 0/0:33.9977:8:8:303:0:0:0,-2.40824,-10 0/0:70.1213:20:20:740:0:0:0,-6.0206,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:55.0698:15:15:548:0:0:0,-4.51545,-10 0/0:79.1522:23:23:830:0:0:0,-6.92369,-10 0/0:24.9668:5:5:190:0:0:0,-1.50515,-10 0/0:64.1007:18:18:668:0:0:0,-5.41854,-10 0/0:52.0595:14:14:524:0:0:0,-4.21442,-10 0/0:97.2119:29:29:1089:0:0:0,-8.72987,-10 0/0:73.1316:21:21:758:0:0:0,-6.32163,-10 0/0:46.0389:12:12:451:0:0:0,-3.61236,-10 0/0:40.0183:10:10:358:0:0:0,-3.0103,-10 0/0:97.2119:29:29:1068:0:0:0,-8.72987,-10 0/0:15.9359:2:2:74:0:0:0,-0.60206,-7.03 0/0:40.0183:10:10:352:0:0:0,-3.0103,-10 0/0:58.0801:16:16:570:0:0:0,-4.81648,-10 0/0:52.0595:14:14:505:0:0:0,-4.21442,-10 0/0:49.0492:13:13:484:0:0:0,-3.91339,-10 0/0:27.9771:6:6:221:0:0:0,-1.80618,-10 0/0:40.0183:10:10:371:0:0:0,-3.0103,-10 0/0:85.1727:25:25:933:0:0:0,-7.52575,-10 0/0:55.0698:15:15:542:0:0:0,-4.51545,-10 0/0:37.008:9:9:317:0:0:0,-2.70927,-10 0/0:79.1522:23:23:851:0:0:0,-6.92369,-10 0/0:76.1419:22:22:794:0:0:0,-6.62266,-10 0/0:49.0492:13:13:454:0:0:0,-3.91339,-10 0/0:64.1007:18:18:678:0:0:0,-5.41854,-10 0/0:55.0698:15:15:570:0:0:0,-4.51545,-10 0/0:55.0698:15:15:557:0:0:0,-4.51545,-10 0/0:99:32:32:1199:0:0:0,-9.63296,-10 0/0:64.1007:18:18:643:0:0:0,-5.41854,-10 0/0:40.0183:10:10:343:0:0:0,-3.0103,-10 0/0:73.1316:21:21:753:0:0:0,-6.32163,-10 0/0:40.0183:10:10:366:0:0:0,-3.0103,-10 0/0:73.1316:21:21:766:0:0:0,-6.32163,-10 0/0:55.0698:15:15:499:0:0:0,-4.51545,-10 0/0:33.9977:8:8:291:0:0:0,-2.40824,-10 0/0:73.1316:21:21:789:0:0:0,-6.32163,-10 0/0:40.0183:10:10:380:0:0:0,-3.0103,-10 0/0:43.0286:11:11:407:0:0:0,-3.31133,-10 0/0:37.008:9:9:340:0:0:0,-2.70927,-10 0/0:33.9977:8:8:303:0:0:0,-2.40824,-10 0/0:33.9977:8:8:302:0:0:0,-2.40824,-10 0/0:64.1007:18:18:639:0:0:0,-5.41854,-10 0/0:67.111:19:19:620:0:0:0,-5.71957,-10 0/0:99:36:36:1265:0:0:0,-10,-10 0/0:52.0595:14:14:510:0:0:0,-4.21442,-10 0/0:40.0183:10:10:361:0:0:0,-3.0103,-10 0/0:91.1929:27:27:1018:0:0:0,-8.12781,-10 0/0:52.0595:14:14:531:0:0:0,-4.21442,-10 0/0:30.9874:7:7:256:0:0:0,-2.10721,-10 0/0:82.1625:24:24:904:0:0:0,-7.22472,-10 0/0:33.9977:8:8:284:0:0:0,-2.40824,-10 0/0:46.0389:12:12:447:0:0:0,-3.61236,-10 0/1:99:29:15:524:14:476:-10,0,-10 1/1:10.4576:18:0:0:18:643:-10,-5.41854,0 0/1:8.31799e-05:6:0:0:6:219:-10,-1.80618,0 1/1:4.43695:16:0:0:16:593:-10,-4.81648,0 0/0:70.1213:20:20:745:0:0:0,-6.0206,-10 0/0:40.0183:10:10:356:0:0:0,-3.0103,-10 0/0:24.9668:5:5:160:0:0:0,-1.50515,-10 0/0:15.9359:2:2:76:0:0:0,-0.60206,-7.22 0/0:33.9977:8:8:275:0:0:0,-2.40824,-10 0/0:76.1419:22:22:803:0:0:0,-6.62266,-10 0/0:58.0801:16:16:605:0:0:0,-4.81648,-10 0/0:49.0492:13:13:494:0:0:0,-3.91339,-10 0/0:40.0183:10:10:376:0:0:0,-3.0103,-10 0/0:97.2119:29:29:1074:0:0:0,-8.72987,-10 0/0:40.0183:10:10:367:0:0:0,-3.0103,-10 0/0:18.9462:3:3:114:0:0:0,-0.90309,-10 0/0:37.008:9:9:309:0:0:0,-2.70927,-10 0/0:27.9771:6:6:226:0:0:0,-1.80618,-10 0/0:64.1007:18:18:682:0:0:0,-5.41854,-10 0/0:49.0492:14:13:469:0:0:0,-3.91339,-10 0/0:61.0904:17:17:637:0:0:0,-5.11751,-10 scaffold_186 508197 . C T 1653.98 . AB=0.511111;ABP=3.10681;AC=5;AF=0.0271739;AN=184;AO=65;CIGAR=1X;DP=1860;DPB=1860;DPRA=1.2107;EPP=12.665;EPPR=17.1285;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=2.87164;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2322;QR=65014;RO=1794;RPP=135.604;RPPR=3650.81;RUN=1;SAF=23;SAP=15.0703;SAR=42;SRF=922;SRP=6.03632;SRR=872;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.0609:15:15:551:0:0:0,-4.51545,-10 0/0:46.03:12:12:430:0:0:0,-3.61236,-10 0/0:70.1124:20:20:723:0:0:0,-6.0206,-10 0/0:85.1639:25:25:892:0:0:0,-7.52575,-10 0/0:36.9991:9:9:342:0:0:0,-2.70927,-10 0/0:27.9682:6:6:219:0:0:0,-1.80618,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/1:99:30:14:518:16:537:-10,0,-10 0/0:67.1021:19:19:691:0:0:0,-5.71957,-10 0/0:21.9476:4:4:123:0:0:0,-1.20412,-10 0/0:46.03:12:12:451:0:0:0,-3.61236,-10 0/0:52.0506:14:14:500:0:0:0,-4.21442,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:99:46:46:1691:0:0:0,-10,-10 0/0:79.1432:23:23:821:0:0:0,-6.92369,-10 0/0:88.1741:26:26:956:0:0:0,-7.82678,-10 0/0:99:32:32:1136:0:0:0,-9.63296,-10 0/0:43.0197:11:11:391:0:0:0,-3.31133,-10 0/0:82.1536:24:24:863:0:0:0,-7.22472,-10 0/0:99:47:47:1719:0:0:0,-10,-10 0/0:43.0197:11:11:407:0:0:0,-3.31133,-10 0/0:70.1124:20:20:758:0:0:0,-6.0206,-10 0/0:33.9888:8:8:299:0:0:0,-2.40824,-10 0/0:55.0609:15:15:487:0:0:0,-4.51545,-10 0/0:79.1432:23:23:827:0:0:0,-6.92369,-10 0/0:91.183:27:27:992:0:0:0,-8.12781,-10 0/0:67.1021:19:19:684:0:0:0,-5.71957,-10 0/0:49.0403:13:13:489:0:0:0,-3.91339,-10 0/0:70.1124:20:20:755:0:0:0,-6.0206,-10 0/0:97.1993:29:29:991:0:0:0,-8.72987,-10 0/0:30.9785:7:7:234:0:0:0,-2.10721,-10 0/0:33.9888:8:8:281:0:0:0,-2.40824,-10 0/0:70.1124:20:20:726:0:0:0,-6.0206,-10 0/0:43.0197:11:11:390:0:0:0,-3.31133,-10 0/0:73.1227:21:21:763:0:0:0,-6.32163,-10 0/0:18.9373:3:3:112:0:0:0,-0.90309,-10 0/0:43.0197:11:11:410:0:0:0,-3.31133,-10 0/0:97.1993:29:29:1060:0:0:0,-8.72987,-10 1/1:12.9327:18:0:0:18:669:-10,-5.41854,0 0/0:46.03:12:12:422:0:0:0,-3.61236,-10 0/0:88.1741:26:26:976:0:0:0,-7.82678,-10 0/0:55.0609:15:15:553:0:0:0,-4.51545,-10 0/0:79.1432:23:23:862:0:0:0,-6.92369,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/1:99:36:18:634:18:649:-10,0,-10 0/0:52.0506:14:14:484:0:0:0,-4.21442,-10 0/0:99:46:46:1653:0:0:0,-10,-10 0/0:76.133:22:22:783:0:0:0,-6.62266,-10 0/0:23.3286:13:12:453:1:15:0,-1.29945,-10 0/0:99:43:43:1529:0:0:0,-10,-10 0/0:70.1124:20:20:750:0:0:0,-6.0206,-10 0/0:99:35:35:1269:0:0:0,-10,-10 0/0:64.0918:18:18:680:0:0:0,-5.41854,-10 0/0:43.0197:11:11:381:0:0:0,-3.31133,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/0:49.0403:13:13:484:0:0:0,-3.91339,-10 0/0:91.183:27:27:940:0:0:0,-8.12781,-10 0/0:21.9476:4:4:150:0:0:0,-1.20412,-10 0/0:64.0918:18:18:660:0:0:0,-5.41854,-10 0/0:33.9888:8:8:304:0:0:0,-2.40824,-10 0/0:97.1993:29:29:1074:0:0:0,-8.72987,-10 0/0:70.1124:20:20:730:0:0:0,-6.0206,-10 0/0:99:36:36:1305:0:0:0,-10,-10 0/0:73.1227:21:21:755:0:0:0,-6.32163,-10 0/0:33.9888:8:8:303:0:0:0,-2.40824,-10 0/0:85.1639:25:25:878:0:0:0,-7.52575,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:55.0609:15:15:536:0:0:0,-4.51545,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:73.1227:21:21:696:0:0:0,-6.32163,-10 0/0:73.1227:22:21:689:0:0:0,-6.32163,-10 0/0:99:33:33:1227:0:0:0,-9.93399,-10 0/0:99:30:30:1061:0:0:0,-9.0309,-10 0/0:55.0609:15:15:570:0:0:0,-4.51545,-10 0/0:99:31:31:1121:0:0:0,-9.33193,-10 0/0:36.9991:9:9:331:0:0:0,-2.70927,-10 0/0:30.9785:7:7:260:0:0:0,-2.10721,-10 0/0:46.03:12:12:446:0:0:0,-3.61236,-10 0/0:30.9785:7:7:263:0:0:0,-2.10721,-10 0/0:40.0094:10:10:365:0:0:0,-3.0103,-10 0/0:99:41:41:1510:0:0:0,-10,-10 0/1:99:24:12:453:12:452:-10,0,-10 0/0:64.0918:18:18:665:0:0:0,-5.41854,-10 0/0:61.0815:17:17:640:0:0:0,-5.11751,-10 0/0:64.0918:18:18:661:0:0:0,-5.41854,-10 0/0:18.9373:3:3:113:0:0:0,-0.90309,-10 0/0:55.0609:15:15:563:0:0:0,-4.51545,-10 0/0:52.0506:14:14:479:0:0:0,-4.21442,-10 0/0:33.9888:8:8:287:0:0:0,-2.40824,-10 0/0:58.0712:16:16:550:0:0:0,-4.81648,-10 0/0:97.1993:29:29:1032:0:0:0,-8.72987,-10 0/0:58.0712:16:16:574:0:0:0,-4.81648,-10 scaffold_186 508199 . C T 9005.1 . AB=0.534247;ABP=5.98492;AC=32;AF=0.173913;AN=184;AO=325;CIGAR=1X;DP=1860;DPB=1860;DPRA=1.0531;EPP=7.18621;EPPR=8.28104;GTI=2;LEN=1;MEANALT=1.04167;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.421047;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11722;QR=55512;RO=1533;RPP=632.731;RPPR=3177.37;RUN=1;SAF=166;SAP=3.33769;SAR=159;SRF=779;SRP=3.8956;SRR=754;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:26.2445:15:0:0:15:529:-10,-4.51545,0 0/0:44.2344:12:12:428:0:0:0,-3.61236,-10 0/0:68.3168:20:20:713:0:0:0,-6.0206,-10 0/0:83.3681:25:25:903:0:0:0,-7.52575,-10 0/1:99:9:3:114:6:224:-10,0,-9.85501 0/0:26.1726:6:6:193:0:0:0,-1.80618,-10 0/0:99:34:34:1250:0:0:0,-10,-10 0/0:98.4201:30:30:1108:0:0:0,-9.0309,-10 0/0:65.3065:19:19:691:0:0:0,-5.71957,-10 0/0:20.152:4:4:126:0:0:0,-1.20412,-10 0/0:44.2344:12:12:444:0:0:0,-3.61236,-10 0/0:50.255:14:14:498:0:0:0,-4.21442,-10 0/1:99:31:14:498:17:640:-10,0,-10 0/0:99:46:46:1687:0:0:0,-10,-10 0/0:77.3476:23:23:830:0:0:0,-6.92369,-10 0/0:86.3782:26:26:952:0:0:0,-7.82678,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:41.2241:11:11:410:0:0:0,-3.31133,-10 0/0:80.3579:24:24:891:0:0:0,-7.22472,-10 0/0:99:47:47:1743:0:0:0,-10,-10 0/0:41.2241:11:11:403:0:0:0,-3.31133,-10 0/0:68.3168:20:20:738:0:0:0,-6.0206,-10 0/1:1.41913:8:0:0:8:304:-10,-2.40824,0 0/1:99:15:10:304:5:190:-10,0,-10 0/0:77.3476:23:23:844:0:0:0,-6.92369,-10 0/0:89.3889:27:27:985:0:0:0,-8.12781,-10 0/0:65.3065:19:19:705:0:0:0,-5.71957,-10 0/0:47.2447:13:13:487:0:0:0,-3.91339,-10 0/0:68.3168:20:20:756:0:0:0,-6.0206,-10 0/0:95.4096:29:29:998:0:0:0,-8.72987,-10 0/0:26.1726:7:6:190:0:0:0,-1.80618,-10 0/0:32.1932:8:8:294:0:0:0,-2.40824,-10 0/0:68.3168:20:20:713:0:0:0,-6.0206,-10 1/1:14.2033:11:0:0:11:410:-10,-3.31133,0 0/0:71.3271:21:21:783:0:0:0,-6.32163,-10 0/0:17.1417:3:3:114:0:0:0,-0.90309,-10 0/0:41.2241:11:11:412:0:0:0,-3.31133,-10 0/0:95.4096:29:29:1080:0:0:0,-8.72987,-10 0/0:62.2962:18:18:658:0:0:0,-5.41854,-10 0/0:44.2344:12:12:435:0:0:0,-3.61236,-10 0/0:86.3782:26:26:984:0:0:0,-7.82678,-10 0/0:53.2653:15:15:534:0:0:0,-4.51545,-10 0/0:77.3476:23:23:838:0:0:0,-6.92369,-10 0/1:99:31:19:717:12:454:-10,0,-10 0/0:99:36:36:1311:0:0:0,-10,-10 0/0:50.255:14:14:512:0:0:0,-4.21442,-10 0/0:99:46:46:1571:0:0:0,-10,-10 0/0:74.3374:22:22:816:0:0:0,-6.62266,-10 0/0:47.2447:13:13:454:0:0:0,-3.91339,-10 0/0:99:43:42:1519:1:15:0,-9.81082,-10 0/0:68.3168:20:20:731:0:0:0,-6.0206,-10 0/0:99:35:35:1270:0:0:0,-10,-10 0/0:62.2962:18:18:670:0:0:0,-5.41854,-10 0/0:41.2241:11:11:370:0:0:0,-3.31133,-10 0/0:99:38:38:1395:0:0:0,-10,-10 1/1:20.2239:13:0:0:13:472:-10,-3.91339,0 0/0:89.3889:27:27:928:0:0:0,-8.12781,-10 0/1:0.0763285:4:0:0:4:152:-10,-1.20412,0 0/0:62.2962:18:18:673:0:0:0,-5.41854,-10 0/0:32.1932:8:8:304:0:0:0,-2.40824,-10 0/1:99:29:17:640:12:423:-10,0,-10 0/0:68.3168:20:20:715:0:0:0,-6.0206,-10 1/1:89.46:36:0:0:36:1319:-10,-10,0 0/1:99:21:10:309:11:410:-10,0,-10 0/0:32.1932:8:8:304:0:0:0,-2.40824,-10 0/1:99:25:15:545:10:344:-10,0,-10 1/1:80.4298:34:0:0:33:1184:-10,-9.93399,0 0/0:53.2653:15:15:513:0:0:0,-4.51545,-10 0/0:98.4201:30:30:1074:0:0:0,-9.0309,-10 1/1:44.3063:21:0:0:21:742:-10,-6.32163,0 0/0:74.3374:22:22:805:0:0:0,-6.62266,-10 0/0:99:33:33:1239:0:0:0,-9.93399,-10 0/0:98.4201:30:30:1092:0:0:0,-9.0309,-10 0/0:53.2653:15:15:547:0:0:0,-4.51545,-10 0/0:99:31:31:1120:0:0:0,-9.33193,-10 1/1:8.18271:9:0:0:9:333:-10,-2.70927,0 0/0:29.1829:7:7:266:0:0:0,-2.10721,-10 1/1:17.2136:12:0:0:12:416:-10,-3.61236,0 0/0:29.1829:7:7:252:0:0:0,-2.10721,-10 0/0:38.2138:10:10:369:0:0:0,-3.0103,-10 0/1:99:41:13:471:28:1010:-10,0,-10 0/1:99:24:12:441:12:438:-10,0,-10 0/0:62.2962:18:18:616:0:0:0,-5.41854,-10 0/1:99:17:10:372:7:260:-10,0,-10 1/1:35.2754:18:0:0:18:634:-10,-5.41854,0 0/0:17.1417:3:3:114:0:0:0,-0.90309,-10 0/0:53.2653:15:15:541:0:0:0,-4.51545,-10 0/0:50.255:14:14:475:0:0:0,-4.21442,-10 0/1:99:8:4:148:4:126:-10,0,-10 0/0:56.2756:16:16:524:0:0:0,-4.81648,-10 0/1:99:29:9:342:20:693:-10,0,-10 0/0:56.2756:16:16:525:0:0:0,-4.81648,-10 scaffold_186 542135 . G A 6658.07 . AB=0.482143;ABP=3.94093;AC=27;AF=0.145161;AN=186;AO=249;CIGAR=1X;DP=1396;DPB=1396;DPRA=1.37614;EPP=14.949;EPPR=9.16123;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.966;NS=93;NUMALT=1;ODDS=0.545648;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9054;QR=41329;RO=1147;RPP=543.707;RPPR=2493.69;RUN=1;SAF=143;SAP=14.949;SAR=106;SRF=602;SRP=9.16123;SRR=545;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.2011:11:11:400:0:0:0,-3.31133,-10 0/0:25.1496:6:6:205:0:0:0,-1.80618,-10 0/0:85.3555:26:26:962:0:0:0,-7.82678,-10 0/0:31.1702:8:8:292:0:0:0,-2.40824,-10 0/0:46.2217:13:13:478:0:0:0,-3.91339,-10 0/0:31.1702:8:8:299:0:0:0,-2.40824,-10 1/1:75.0921:26:0:0:26:942:-10,-7.82678,0 0/1:99:18:8:292:10:364:-10,0,-10 0/0:28.1599:7:7:233:0:0:0,-2.10721,-10 0/0:16.1187:3:3:108:0:0:0,-0.90309,-10 0/0:22.1393:5:5:190:0:0:0,-1.50515,-10 0/0:34.1805:9:9:289:0:0:0,-2.70927,-10 0/0:91.3758:28:28:972:0:0:0,-8.42884,-10 0/1:99:23:9:323:14:500:-10,0,-10 0/1:99:24:13:464:11:391:-10,0,-10 1/1:54.0201:19:0:0:19:698:-10,-5.71957,0 0/1:99:17:7:261:10:379:-10,0,-10 1/1:8.86556:4:0:0:4:152:-10,-1.20412,0 0/0:49.232:14:14:524:0:0:0,-4.21442,-10 0/1:99:31:16:569:15:536:-10,0,-10 0/0:0.856236:15:14:461:1:38:-0.460641,0,-10 0/1:99:22:10:365:12:455:-10,0,-10 0/0:22.1393:5:5:157:0:0:0,-1.50515,-10 0/1:99:19:9:340:10:346:-10,0,-10 0/0:43.2114:12:12:422:0:0:0,-3.61236,-10 0/0:73.3144:22:22:812:0:0:0,-6.62266,-10 0/0:35.0291:18:17:611:1:16:0,-2.56327,-10 0/0:19.129:4:4:152:0:0:0,-1.20412,-10 0/0:61.2732:18:18:604:0:0:0,-5.41854,-10 0/0:37.1908:10:10:375:0:0:0,-3.0103,-10 0/0:40.2011:11:11:408:0:0:0,-3.31133,-10 0/0:34.1805:9:9:308:0:0:0,-2.70927,-10 1/1:35.9583:13:0:0:13:467:-10,-3.91339,0 0/0:40.2011:11:11:418:0:0:0,-3.31133,-10 0/0:58.2629:17:17:634:0:0:0,-5.11751,-10 0/0:28.1599:7:7:216:0:0:0,-2.10721,-10 0/0:43.2114:12:12:440:0:0:0,-3.61236,-10 0/1:99:21:13:481:8:299:-10,0,-10 0/0:55.2526:16:16:562:0:0:0,-4.81648,-10 0/0:37.1908:10:10:377:0:0:0,-3.0103,-10 0/0:85.3555:26:26:946:0:0:0,-7.82678,-10 0/0:55.2526:16:16:599:0:0:0,-4.81648,-10 0/0:58.2629:17:17:604:0:0:0,-5.11751,-10 0/0:91.3758:28:28:951:0:0:0,-8.42884,-10 0/0:40.2011:11:11:390:0:0:0,-3.31133,-10 0/1:55.1269:9:7:264:2:76:-6.06703,0,-10 0/1:99:23:12:430:11:391:-10,0,-10 0/0:61.2732:18:18:620:0:0:0,-5.41854,-10 0/0:61.2732:18:18:610:0:0:0,-5.41854,-10 0/0:97.3953:30:30:1080:0:0:0,-9.0309,-10 0/1:20.2913:10:9:335:1:38:-1.7897,0,-10 0/0:79.335:24:24:863:0:0:0,-7.22472,-10 0/0:43.2114:12:12:420:0:0:0,-3.61236,-10 0/0:34.1805:9:9:328:0:0:0,-2.70927,-10 0/1:99:28:16:606:12:412:-10,0,-10 0/0:40.2011:11:11:382:0:0:0,-3.31133,-10 0/0:49.232:14:14:508:0:0:0,-4.21442,-10 0/0:28.1599:7:7:260:0:0:0,-2.10721,-10 0/0:61.2732:18:18:666:0:0:0,-5.41854,-10 0/0:31.1702:8:8:294:0:0:0,-2.40824,-10 0/0:55.2526:16:16:587:0:0:0,-4.81648,-10 0/0:40.2011:11:11:386:0:0:0,-3.31133,-10 0/0:97.3953:30:30:1102:0:0:0,-9.0309,-10 0/0:85.3555:26:26:955:0:0:0,-7.82678,-10 0/0:49.232:14:14:521:0:0:0,-4.21442,-10 0/0:64.2835:19:19:650:0:0:0,-5.71957,-10 0/1:99:22:10:373:12:420:-10,0,-10 0/0:37.1908:10:10:375:0:0:0,-3.0103,-10 0/0:61.2732:18:18:670:0:0:0,-5.41854,-10 0/0:16.1187:3:3:113:0:0:0,-0.90309,-10 0/0:55.2526:16:16:599:0:0:0,-4.81648,-10 0/0:85.3555:26:26:897:0:0:0,-7.82678,-10 0/0:34.1805:9:9:330:0:0:0,-2.70927,-10 0/0:52.2423:15:15:525:0:0:0,-4.51545,-10 0/0:88.3651:27:27:913:0:0:0,-8.12781,-10 0/0:28.1599:7:7:260:0:0:0,-2.10721,-10 0/0:31.1702:8:8:282:0:0:0,-2.40824,-10 0/0:46.2217:13:13:447:0:0:0,-3.91339,-10 0/0:22.1393:5:5:190:0:0:0,-1.50515,-10 0/0:31.1702:8:8:284:0:0:0,-2.40824,-10 0/1:99:31:14:517:17:642:-10,0,-10 1/1:63.051:22:0:0:22:824:-10,-6.62266,0 0/0:46.2217:13:13:460:0:0:0,-3.91339,-10 0/1:99:13:8:298:5:190:-10,0,-10 0/0:55.2526:16:16:596:0:0:0,-4.81648,-10 0/0:31.1702:8:8:300:0:0:0,-2.40824,-10 0/0:43.2114:12:12:449:0:0:0,-3.61236,-10 0/0:28.1599:7:7:261:0:0:0,-2.10721,-10 0/1:60.1494:6:4:140:2:73:-6.30491,0,-10 0/0:67.2938:20:20:755:0:0:0,-6.0206,-10 0/1:99:19:9:337:10:367:-10,0,-10 0/0:0.846044:16:15:559:1:38:-0.18764,0,-10 scaffold_186 542160 . T C 1314.7 . AB=0.493506;ABP=3.0385;AC=5;AF=0.0268817;AN=186;AO=52;CIGAR=1X;DP=1410;DPB=1410;DPRA=1.53506;EPP=3.17734;EPPR=5.44421;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9713;NS=93;NUMALT=1;ODDS=1.79528;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1841;QR=50194;RO=1357;RPP=99.2232;RPPR=2373.05;RUN=1;SAF=25;SAP=3.17734;SAR=27;SRF=720;SRP=14.0341;SRR=637;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:42.3256:11:11:396:0:0:0,-3.31133,-10 0/0:27.2741:6:6:204:0:0:0,-1.80618,-10 0/0:87.4801:26:26:967:0:0:0,-7.82678,-10 0/0:36.305:9:9:320:0:0:0,-2.70927,-10 0/0:48.3462:13:13:493:0:0:0,-3.91339,-10 0/0:33.2947:8:8:303:0:0:0,-2.40824,-10 0/0:87.4801:26:26:929:0:0:0,-7.82678,-10 0/0:66.408:19:19:700:0:0:0,-5.71957,-10 0/0:30.2844:7:7:265:0:0:0,-2.10721,-10 0/0:18.2432:3:3:110:0:0:0,-0.90309,-10 0/0:30.2844:7:7:263:0:0:0,-2.10721,-10 0/0:36.305:9:9:335:0:0:0,-2.70927,-10 0/0:93.4998:28:28:1041:0:0:0,-8.42884,-10 0/0:78.4492:23:23:854:0:0:0,-6.92369,-10 0/0:81.4594:24:24:869:0:0:0,-7.22472,-10 0/0:66.408:19:19:708:0:0:0,-5.71957,-10 0/0:60.3874:17:17:643:0:0:0,-5.11751,-10 0/0:21.2535:4:4:152:0:0:0,-1.20412,-10 0/0:51.3565:14:14:503:0:0:0,-4.21442,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:54.3668:15:15:570:0:0:0,-4.51545,-10 0/0:75.4389:22:22:811:0:0:0,-6.62266,-10 0/0:24.2638:5:5:190:0:0:0,-1.50515,-10 0/0:69.4183:20:20:758:0:0:0,-6.0206,-10 0/0:45.3359:12:12:449:0:0:0,-3.61236,-10 0/1:99:23:11:414:12:414:-10,0,-10 0/0:63.3977:18:18:654:0:0:0,-5.41854,-10 0/0:21.2535:4:4:150:0:0:0,-1.20412,-10 0/0:63.3977:18:18:661:0:0:0,-5.41854,-10 0/0:39.3153:10:10:378:0:0:0,-3.0103,-10 0/0:42.3256:11:11:417:0:0:0,-3.31133,-10 0/0:36.305:9:9:273:0:0:0,-2.70927,-10 0/0:48.3462:13:13:493:0:0:0,-3.91339,-10 0/0:42.3256:11:11:418:0:0:0,-3.31133,-10 0/0:60.3874:17:17:639:0:0:0,-5.11751,-10 0/0:30.2844:7:7:261:0:0:0,-2.10721,-10 0/0:45.3359:12:12:439:0:0:0,-3.61236,-10 0/0:72.4286:21:21:788:0:0:0,-6.32163,-10 0/0:57.3771:16:16:608:0:0:0,-4.81648,-10 0/0:39.3153:10:10:373:0:0:0,-3.0103,-10 0/0:87.4801:26:26:979:0:0:0,-7.82678,-10 0/0:57.3771:16:16:607:0:0:0,-4.81648,-10 0/0:60.3874:17:17:619:0:0:0,-5.11751,-10 0/0:93.4998:28:28:1033:0:0:0,-8.42884,-10 0/0:42.3256:11:11:410:0:0:0,-3.31133,-10 0/0:36.305:9:9:333:0:0:0,-2.70927,-10 0/0:81.4594:24:24:894:0:0:0,-7.22472,-10 0/0:63.3977:18:18:651:0:0:0,-5.41854,-10 0/0:63.3977:18:18:637:0:0:0,-5.41854,-10 0/1:99:30:13:487:17:607:-10,0,-10 0/0:39.3153:10:10:374:0:0:0,-3.0103,-10 0/1:99:24:15:569:9:310:-10,0,-10 0/0:45.3359:12:12:433:0:0:0,-3.61236,-10 0/0:36.305:9:9:340:0:0:0,-2.70927,-10 0/0:96.5093:29:29:1071:0:0:0,-8.72987,-10 0/0:42.3256:11:11:415:0:0:0,-3.31133,-10 0/0:54.3668:15:15:563:0:0:0,-4.51545,-10 0/0:30.2844:7:7:261:0:0:0,-2.10721,-10 0/0:63.3977:18:18:671:0:0:0,-5.41854,-10 0/0:33.2947:8:8:282:0:0:0,-2.40824,-10 0/0:57.3771:16:16:571:0:0:0,-4.81648,-10 0/0:42.3256:11:11:413:0:0:0,-3.31133,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:87.4801:27:26:983:0:0:0,-7.82678,-10 1/1:9.01434:14:0:0:14:510:-10,-4.21442,0 0/0:66.408:19:19:693:0:0:0,-5.71957,-10 0/0:75.4389:22:22:832:0:0:0,-6.62266,-10 0/0:42.3256:11:11:417:0:0:0,-3.31133,-10 0/0:63.3977:18:18:660:0:0:0,-5.41854,-10 0/0:21.2535:4:4:152:0:0:0,-1.20412,-10 0/0:57.3771:16:16:591:0:0:0,-4.81648,-10 0/0:87.4801:26:26:948:0:0:0,-7.82678,-10 0/0:36.305:9:9:317:0:0:0,-2.70927,-10 0/0:57.3771:16:16:586:0:0:0,-4.81648,-10 0/0:90.4905:27:27:962:0:0:0,-8.12781,-10 0/0:30.2844:7:7:263:0:0:0,-2.10721,-10 0/0:33.2947:8:8:293:0:0:0,-2.40824,-10 0/0:48.3462:13:13:464:0:0:0,-3.91339,-10 0/0:24.2638:5:5:190:0:0:0,-1.50515,-10 0/0:33.2947:8:8:304:0:0:0,-2.40824,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:75.4389:22:22:827:0:0:0,-6.62266,-10 0/0:48.3462:13:13:470:0:0:0,-3.91339,-10 0/0:48.3462:13:13:483:0:0:0,-3.91339,-10 0/0:57.3771:16:16:597:0:0:0,-4.81648,-10 0/0:33.2947:8:8:282:0:0:0,-2.40824,-10 0/0:45.3359:12:12:446:0:0:0,-3.61236,-10 0/0:30.2844:7:7:257:0:0:0,-2.10721,-10 0/0:27.2741:6:6:216:0:0:0,-1.80618,-10 0/0:69.4183:20:20:758:0:0:0,-6.0206,-10 0/0:69.4183:20:20:740:0:0:0,-6.0206,-10 0/0:57.3771:16:16:599:0:0:0,-4.81648,-10 scaffold_186 542168 . C T 307.128 . AB=0.545455;ABP=3.40511;AC=1;AF=0.00537634;AN=186;AO=12;CIGAR=1X;DP=1408;DPB=1408;DPRA=1.46032;EPP=3.73412;EPPR=17.9493;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9721;NS=93;NUMALT=1;ODDS=5.86072;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=455;QR=51062;RO=1396;RPP=29.068;RPPR=2939.59;RUN=1;SAF=7;SAP=3.73412;SAR=5;SRF=736;SRP=11.9948;SRR=660;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.5803:11:11:392:0:0:0,-3.31133,-10 0/0:40.5288:6:6:226:0:0:0,-1.80618,-10 0/0:99:26:26:971:0:0:0,-7.82678,-10 0/0:49.5597:9:9:325:0:0:0,-2.70927,-10 0/0:61.6009:13:13:492:0:0:0,-3.91339,-10 0/0:46.5494:8:8:293:0:0:0,-2.40824,-10 0/0:99:26:26:942:0:0:0,-7.82678,-10 0/0:79.6626:19:19:699:0:0:0,-5.71957,-10 0/0:43.5391:7:7:265:0:0:0,-2.10721,-10 0/0:31.4979:3:3:92:0:0:0,-0.90309,-8.58667 0/0:43.5391:7:7:261:0:0:0,-2.10721,-10 0/0:49.5597:9:9:298:0:0:0,-2.70927,-10 0/0:99:28:28:1038:0:0:0,-8.42884,-10 0/0:91.7033:23:23:810:0:0:0,-6.92369,-10 0/0:94.7144:24:24:870:0:0:0,-7.22472,-10 0/0:79.6626:19:19:677:0:0:0,-5.71957,-10 0/0:70.6318:16:16:607:0:0:0,-4.81648,-10 0/0:34.5082:4:4:152:0:0:0,-1.20412,-10 0/0:64.6112:14:14:503:0:0:0,-4.21442,-10 0/0:99:31:31:1132:0:0:0,-9.33193,-10 0/0:67.6215:15:15:568:0:0:0,-4.51545,-10 0/0:88.6933:22:22:830:0:0:0,-6.62266,-10 0/0:37.5185:5:5:190:0:0:0,-1.50515,-10 0/0:82.673:20:20:735:0:0:0,-6.0206,-10 0/0:58.5906:12:12:444:0:0:0,-3.61236,-10 0/0:91.7033:23:23:848:0:0:0,-6.92369,-10 0/0:76.6524:18:18:661:0:0:0,-5.41854,-10 0/0:34.5082:4:4:145:0:0:0,-1.20412,-10 0/0:76.6524:18:18:642:0:0:0,-5.41854,-10 0/0:52.57:10:10:376:0:0:0,-3.0103,-10 0/0:55.5803:11:11:408:0:0:0,-3.31133,-10 0/0:49.5597:9:9:288:0:0:0,-2.70927,-10 0/0:61.6009:13:13:460:0:0:0,-3.91339,-10 0/0:55.5803:11:11:418:0:0:0,-3.31133,-10 0/0:73.6421:17:17:634:0:0:0,-5.11751,-10 0/0:43.5391:7:7:234:0:0:0,-2.10721,-10 0/0:58.5906:12:12:417:0:0:0,-3.61236,-10 0/0:85.6831:21:21:767:0:0:0,-6.32163,-10 0/0:70.6318:16:16:598:0:0:0,-4.81648,-10 0/0:52.57:10:10:376:0:0:0,-3.0103,-10 0/0:99:26:26:925:0:0:0,-7.82678,-10 0/0:70.6318:16:16:605:0:0:0,-4.81648,-10 0/0:73.6421:17:17:565:0:0:0,-5.11751,-10 0/0:99:28:28:988:0:0:0,-8.42884,-10 0/0:55.5803:11:11:414:0:0:0,-3.31133,-10 0/0:49.5597:9:9:338:0:0:0,-2.70927,-10 0/0:94.7144:24:24:903:0:0:0,-7.22472,-10 0/0:76.6524:18:18:633:0:0:0,-5.41854,-10 0/0:76.6524:18:18:621:0:0:0,-5.41854,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:52.57:10:10:367:0:0:0,-3.0103,-10 0/0:94.7144:24:24:904:0:0:0,-7.22472,-10 0/0:58.5906:12:12:442:0:0:0,-3.61236,-10 0/0:49.5597:9:9:328:0:0:0,-2.70927,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:55.5803:11:11:402:0:0:0,-3.31133,-10 0/0:67.6215:15:15:565:0:0:0,-4.51545,-10 0/0:43.5391:7:7:264:0:0:0,-2.10721,-10 0/0:76.6524:18:18:679:0:0:0,-5.41854,-10 0/0:46.5494:8:8:297:0:0:0,-2.40824,-10 0/0:70.6318:16:16:564:0:0:0,-4.81648,-10 0/0:55.5803:11:11:414:0:0:0,-3.31133,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:61.6009:13:13:481:0:0:0,-3.91339,-10 0/0:79.6626:19:19:698:0:0:0,-5.71957,-10 0/0:88.6933:22:22:826:0:0:0,-6.62266,-10 0/0:55.5803:11:11:407:0:0:0,-3.31133,-10 0/0:76.6524:18:18:651:0:0:0,-5.41854,-10 0/0:34.5082:4:4:143:0:0:0,-1.20412,-10 0/0:70.6318:16:16:577:0:0:0,-4.81648,-10 0/0:99:26:26:935:0:0:0,-7.82678,-10 0/0:49.5597:9:9:340:0:0:0,-2.70927,-10 0/0:70.6318:16:16:578:0:0:0,-4.81648,-10 0/0:99:27:27:965:0:0:0,-8.12781,-10 0/0:43.5391:7:7:266:0:0:0,-2.10721,-10 0/0:46.5494:8:8:270:0:0:0,-2.40824,-10 0/0:61.6009:13:13:489:0:0:0,-3.91339,-10 0/0:37.5185:5:5:190:0:0:0,-1.50515,-10 0/0:46.5494:8:8:304:0:0:0,-2.40824,-10 0/0:99:31:31:1147:0:0:0,-9.33193,-10 0/1:99:22:10:359:12:455:-10,0,-10 0/0:61.6009:13:13:489:0:0:0,-3.91339,-10 0/0:61.6009:13:13:493:0:0:0,-3.91339,-10 0/0:70.6318:16:16:605:0:0:0,-4.81648,-10 0/0:46.5494:8:8:299:0:0:0,-2.40824,-10 0/0:58.5906:12:12:454:0:0:0,-3.61236,-10 0/0:43.5391:7:7:250:0:0:0,-2.10721,-10 0/0:40.5288:6:6:203:0:0:0,-1.80618,-10 0/0:82.673:20:20:759:0:0:0,-6.0206,-10 0/0:82.673:20:20:725:0:0:0,-6.0206,-10 0/0:70.6318:16:16:556:0:0:0,-4.81648,-10 scaffold_186 613770 . T G 3099.15 . AB=0.549296;ABP=6.00754;AC=10;AF=0.0543478;AN=184;AO=118;CIGAR=1X;DP=1836;DPB=1836;DPRA=1.20389;EPP=10.3712;EPPR=3.46685;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9913;NS=92;NUMALT=1;ODDS=2.42446;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4267;QR=63013;RO=1717;RPP=259.244;RPPR=3731.43;RUN=1;SAF=49;SAP=10.3712;SAR=69;SRF=849;SRP=3.46685;SRR=868;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:35.1412:9:9:332:0:0:0,-2.70927,-10 0/0:32.1309:8:8:303:0:0:0,-2.40824,-10 0/0:68.2545:20:20:715:0:0:0,-6.0206,-10 0/0:47.1824:13:13:478:0:0:0,-3.91339,-10 0/0:59.2236:17:17:636:0:0:0,-5.11751,-10 0/0:35.1412:9:9:333:0:0:0,-2.70927,-10 0/0:99:40:40:1496:0:0:0,-10,-10 0/0:83.3059:25:25:942:0:0:0,-7.52575,-10 0/0:65.2442:19:19:689:0:0:0,-5.71957,-10 0/0:26.1103:6:6:204:0:0:0,-1.80618,-10 0/0:35.1412:9:9:297:0:0:0,-2.70927,-10 0/0:44.1721:12:12:404:0:0:0,-3.61236,-10 0/0:99:35:35:1261:0:0:0,-10,-10 0/0:74.2751:22:22:808:0:0:0,-6.62266,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:89.3262:27:27:1004:0:0:0,-8.12781,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:47.1824:13:13:491:0:0:0,-3.91339,-10 0/0:77.2854:23:23:871:0:0:0,-6.92369,-10 0/0:99:31:31:1160:0:0:0,-9.33193,-10 0/0:65.2442:19:19:709:0:0:0,-5.71957,-10 0/0:99:39:39:1424:0:0:0,-10,-10 0/0:38.1515:10:10:377:0:0:0,-3.0103,-10 0/0:44.1721:12:12:412:0:0:0,-3.61236,-10 0/0:77.2854:23:23:820:0:0:0,-6.92369,-10 0/0:86.3161:26:26:970:0:0:0,-7.82678,-10 0/0:77.2854:23:23:851:0:0:0,-6.92369,-10 0/0:47.1824:13:13:470:0:0:0,-3.91339,-10 1/1:25.6657:17:0:0:17:607:-10,-5.11751,0 0/0:99:48:48:1726:0:0:0,-10,-10 0/0:41.1618:11:11:396:0:0:0,-3.31133,-10 0/0:50.1927:14:14:525:0:0:0,-4.21442,-10 0/0:47.1824:13:13:469:0:0:0,-3.91339,-10 0/0:53.203:15:15:570:0:0:0,-4.51545,-10 0/0:65.2442:19:19:677:0:0:0,-5.71957,-10 0/0:29.1206:7:7:256:0:0:0,-2.10721,-10 0/0:56.2133:16:16:583:0:0:0,-4.81648,-10 0/0:98.3542:30:30:1127:0:0:0,-9.0309,-10 0/0:68.2545:20:20:745:0:0:0,-6.0206,-10 0/1:99:12:6:220:6:228:-10,0,-10 0/1:99:28:13:493:15:546:-10,0,-10 0/0:77.2854:23:23:865:0:0:0,-6.92369,-10 1/1:40.7172:22:0:0:22:798:-10,-6.62266,0 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:89.3262:27:27:1012:0:0:0,-8.12781,-10 0/1:99:16:5:189:11:375:-10,0,-10 0/1:99:43:24:864:19:695:-10,0,-10 0/0:74.2751:22:22:825:0:0:0,-6.62266,-10 0/0:50.1927:14:14:509:0:0:0,-4.21442,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:47.1824:13:13:430:0:0:0,-3.91339,-10 0/0:99:42:42:1570:0:0:0,-10,-10 0/0:53.203:15:15:512:0:0:0,-4.51545,-10 0/1:0.102029:7:0:0:7:244:-10,-2.10721,0 0/1:99:36:16:593:20:749:-10,0,-10 0/0:56.2133:16:16:568:0:0:0,-4.81648,-10 0/0:65.2442:19:19:678:0:0:0,-5.71957,-10 0/0:41.1618:11:11:409:0:0:0,-3.31133,-10 0/0:44.1721:12:12:455:0:0:0,-3.61236,-10 0/0:44.1721:12:12:456:0:0:0,-3.61236,-10 0/0:95.3456:29:29:1096:0:0:0,-8.72987,-10 0/0:83.3059:25:25:896:0:0:0,-7.52575,-10 0/0:86.3161:26:26:934:0:0:0,-7.82678,-10 0/0:65.2442:19:19:695:0:0:0,-5.71957,-10 0/0:53.203:15:15:554:0:0:0,-4.51545,-10 0/0:92.3361:28:28:1052:0:0:0,-8.42884,-10 0/0:41.1618:11:11:406:0:0:0,-3.31133,-10 0/0:35.1412:9:9:330:0:0:0,-2.70927,-10 0/0:66.1411:31:30:1091:1:25:0,-5.34057,-10 0/0:32.1309:8:8:300:0:0:0,-2.40824,-10 0/0:68.2545:20:20:749:0:0:0,-6.0206,-10 0/0:83.3059:25:25:935:0:0:0,-7.52575,-10 0/0:62.2339:18:18:667:0:0:0,-5.41854,-10 0/0:53.203:15:15:551:0:0:0,-4.51545,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:59.2236:17:17:604:0:0:0,-5.11751,-10 0/0:65.2442:19:19:668:0:0:0,-5.71957,-10 0/0:35.1412:9:9:342:0:0:0,-2.70927,-10 0/0:11.0588:1:1:38:0:0:0,-0.30103,-3.8 0/0:32.1309:8:8:303:0:0:0,-2.40824,-10 0/0:99:37:36:1299:0:0:0,-10,-10 0/0:99:33:33:1247:0:0:0,-9.93399,-10 0/0:68.2545:20:20:748:0:0:0,-6.0206,-10 0/0:56.2133:16:16:561:0:0:0,-4.81648,-10 0/0:83.3059:25:25:924:0:0:0,-7.52575,-10 0/0:29.1206:7:7:259:0:0:0,-2.10721,-10 0/0:98.3542:30:30:1090:0:0:0,-9.0309,-10 0/0:41.1618:11:11:408:0:0:0,-3.31133,-10 0/0:29.1206:7:7:262:0:0:0,-2.10721,-10 0/0:74.2751:22:22:772:0:0:0,-6.62266,-10 0/0:71.2648:21:21:752:0:0:0,-6.32163,-10 0/0:38.1515:10:10:356:0:0:0,-3.0103,-10 scaffold_186 613774 . T C 174.689 . AB=0.470588;ABP=3.13803;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1839;DPB=1839;DPRA=0.849067;EPP=7.35324;EPPR=5.20552;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9918;NS=92;NUMALT=1;ODDS=11.078;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=67139;RO=1829;RPP=20.3821;RPPR=3948.62;RUN=1;SAF=2;SAP=7.35324;SAR=6;SRF=896;SRP=4.63564;SRR=933;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.1937:9:9:342:0:0:0,-2.70927,-10 0/0:69.1834:8:8:295:0:0:0,-2.40824,-10 0/0:99:20:20:677:0:0:0,-6.0206,-10 0/0:84.2349:13:13:487:0:0:0,-3.91339,-10 0/1:99:17:9:309:8:304:-10,0,-10 0/0:72.1937:9:9:331:0:0:0,-2.70927,-10 0/0:99:40:40:1506:0:0:0,-10,-10 0/0:99:25:25:907:0:0:0,-7.52575,-10 0/0:99:19:19:713:0:0:0,-5.71957,-10 0/0:63.1628:6:6:221:0:0:0,-1.80618,-10 0/0:72.1937:9:9:306:0:0:0,-2.70927,-10 0/0:81.2246:12:12:429:0:0:0,-3.61236,-10 0/0:99:35:35:1258:0:0:0,-10,-10 0/0:99:22:22:798:0:0:0,-6.62266,-10 0/0:99:31:31:1174:0:0:0,-9.33193,-10 0/0:99:27:27:952:0:0:0,-8.12781,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:84.2349:13:13:481:0:0:0,-3.91339,-10 0/0:99:23:23:854:0:0:0,-6.92369,-10 0/0:99:31:31:1162:0:0:0,-9.33193,-10 0/0:99:19:19:684:0:0:0,-5.71957,-10 0/0:99:39:39:1472:0:0:0,-10,-10 0/0:75.204:10:10:376:0:0:0,-3.0103,-10 0/0:81.2246:12:12:445:0:0:0,-3.61236,-10 0/0:99:23:22:780:0:0:0,-6.62266,-10 0/0:99:26:26:981:0:0:0,-7.82678,-10 0/0:99:23:23:832:0:0:0,-6.92369,-10 0/0:84.2349:13:13:481:0:0:0,-3.91339,-10 0/0:96.2754:17:17:618:0:0:0,-5.11751,-10 0/0:99:48:48:1712:0:0:0,-10,-10 0/0:78.2143:11:11:396:0:0:0,-3.31133,-10 0/0:87.2451:14:14:523:0:0:0,-4.21442,-10 0/0:84.2349:13:13:484:0:0:0,-3.91339,-10 0/0:93.2655:16:16:606:0:0:0,-4.81648,-10 0/0:99:19:19:699:0:0:0,-5.71957,-10 0/0:66.1731:7:7:264:0:0:0,-2.10721,-10 0/0:93.2655:16:16:590:0:0:0,-4.81648,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:99:20:20:753:0:0:0,-6.0206,-10 0/0:81.2246:12:12:447:0:0:0,-3.61236,-10 0/0:99:28:28:1053:0:0:0,-8.42884,-10 0/0:99:23:23:871:0:0:0,-6.92369,-10 0/0:99:22:22:809:0:0:0,-6.62266,-10 0/0:99:36:36:1292:0:0:0,-10,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:93.2655:16:16:570:0:0:0,-4.81648,-10 0/0:99:43:43:1538:0:0:0,-10,-10 0/0:99:22:22:818:0:0:0,-6.62266,-10 0/0:87.2451:14:14:500:0:0:0,-4.21442,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:84.2349:13:13:474:0:0:0,-3.91339,-10 0/0:99:42:42:1537:0:0:0,-10,-10 0/0:90.2554:15:15:528:0:0:0,-4.51545,-10 0/0:66.1731:7:7:244:0:0:0,-2.10721,-10 0/0:99:37:37:1391:0:0:0,-10,-10 0/0:93.2655:16:16:597:0:0:0,-4.81648,-10 0/0:99:19:19:669:0:0:0,-5.71957,-10 0/0:78.2143:11:11:418:0:0:0,-3.31133,-10 0/0:81.2246:12:12:454:0:0:0,-3.61236,-10 0/0:81.2246:12:12:455:0:0:0,-3.61236,-10 0/0:99:29:29:1094:0:0:0,-8.72987,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 0/0:99:26:26:910:0:0:0,-7.82678,-10 0/0:99:19:19:719:0:0:0,-5.71957,-10 0/0:90.2554:15:15:553:0:0:0,-4.51545,-10 0/0:99:28:28:1060:0:0:0,-8.42884,-10 0/0:78.2143:11:11:417:0:0:0,-3.31133,-10 0/0:72.1937:9:9:313:0:0:0,-2.70927,-10 0/0:99:31:31:1112:0:0:0,-9.33193,-10 0/0:69.1834:8:8:304:0:0:0,-2.40824,-10 0/0:99:20:20:714:0:0:0,-6.0206,-10 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:99:18:18:673:0:0:0,-5.41854,-10 0/0:90.2554:15:15:538:0:0:0,-4.51545,-10 0/0:99:32:32:1187:0:0:0,-9.63296,-10 0/0:96.2754:17:17:611:0:0:0,-5.11751,-10 0/0:99:19:19:684:0:0:0,-5.71957,-10 0/0:72.1937:9:9:342:0:0:0,-2.70927,-10 0/0:48.1113:1:1:38:0:0:0,-0.30103,-3.8 0/0:69.1834:8:8:299:0:0:0,-2.40824,-10 0/0:99:37:37:1345:0:0:0,-10,-10 0/0:99:33:33:1225:0:0:0,-9.93399,-10 0/0:99:20:19:721:0:0:0,-5.71957,-10 0/0:93.2655:16:16:588:0:0:0,-4.81648,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:66.1731:7:7:264:0:0:0,-2.10721,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:78.2143:11:11:396:0:0:0,-3.31133,-10 0/0:66.1731:7:7:266:0:0:0,-2.10721,-10 0/0:99:22:22:776:0:0:0,-6.62266,-10 0/0:99:21:21:769:0:0:0,-6.32163,-10 0/0:75.204:10:10:380:0:0:0,-3.0103,-10 scaffold_186 613782 . G A 3705.97 . AB=0.504348;ABP=3.04806;AC=12;AF=0.0652174;AN=184;AO=136;CIGAR=1X;DP=1844;DPB=1844;DPRA=1.28607;EPP=6.13977;EPPR=8.21777;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9912;NS=92;NUMALT=1;ODDS=1.23473;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4951;QR=62323;RO=1708;RPP=272.848;RPPR=3608.39;RUN=1;SAF=64;SAP=4.03217;SAR=72;SRF=834;SRP=5.04447;SRR=874;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:6.78722:9:0:0:9:338:-10,-2.70927,0 0/0:39.1425:8:8:302:0:0:0,-2.40824,-10 0/0:75.2661:20:20:720:0:0:0,-6.0206,-10 0/0:54.194:13:13:479:0:0:0,-3.91339,-10 0/0:66.2352:17:17:632:0:0:0,-5.11751,-10 0/0:42.1528:9:9:320:0:0:0,-2.70927,-10 0/0:99:40:40:1452:0:0:0,-10,-10 0/0:90.3175:25:25:933:0:0:0,-7.52575,-10 0/0:72.2558:19:19:710:0:0:0,-5.71957,-10 0/0:33.1219:6:6:189:0:0:0,-1.80618,-10 0/0:42.1528:9:9:311:0:0:0,-2.70927,-10 0/0:51.1837:12:12:406:0:0:0,-3.61236,-10 0/0:99:35:35:1253:0:0:0,-10,-10 0/0:81.2867:22:22:790:0:0:0,-6.62266,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:96.3377:27:27:983:0:0:0,-8.12781,-10 0/1:99:31:15:557:16:578:-10,0,-10 0/0:54.194:13:13:476:0:0:0,-3.91339,-10 0/1:99:23:16:567:7:263:-10,0,-10 0/0:99:32:32:1156:0:0:0,-9.63296,-10 0/0:72.2558:19:19:694:0:0:0,-5.71957,-10 0/0:99:39:39:1468:0:0:0,-10,-10 0/0:45.1631:10:10:379:0:0:0,-3.0103,-10 0/1:99:12:6:204:6:206:-10,0,-10 0/0:84.297:23:23:816:0:0:0,-6.92369,-10 0/0:93.3277:26:26:947:0:0:0,-7.82678,-10 0/0:84.297:23:23:859:0:0:0,-6.92369,-10 0/0:54.194:13:13:457:0:0:0,-3.91339,-10 0/0:66.2352:17:17:628:0:0:0,-5.11751,-10 0/1:99:48:16:561:32:1158:-10,0,-10 0/0:48.1734:11:11:413:0:0:0,-3.31133,-10 0/0:57.2043:14:14:523:0:0:0,-4.21442,-10 0/0:54.194:13:13:470:0:0:0,-3.91339,-10 0/0:63.2249:16:16:602:0:0:0,-4.81648,-10 0/0:72.2558:19:19:679:0:0:0,-5.71957,-10 0/0:36.1322:7:7:257:0:0:0,-2.10721,-10 0/0:63.2249:16:16:591:0:0:0,-4.81648,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/0:75.2661:20:20:753:0:0:0,-6.0206,-10 0/0:51.1837:12:12:447:0:0:0,-3.61236,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:84.297:23:23:856:0:0:0,-6.92369,-10 0/0:81.2867:22:22:826:0:0:0,-6.62266,-10 0/0:99:36:36:1315:0:0:0,-10,-10 0/0:96.3377:27:27:997:0:0:0,-8.12781,-10 0/1:99:16:11:412:5:190:-10,0,-10 0/1:99:43:19:691:24:851:-10,0,-10 0/0:81.2867:22:22:787:0:0:0,-6.62266,-10 0/0:57.2043:14:14:521:0:0:0,-4.21442,-10 0/0:99:31:31:1132:0:0:0,-9.33193,-10 0/0:54.194:13:13:457:0:0:0,-3.91339,-10 0/0:99:42:42:1554:0:0:0,-10,-10 0/0:60.2146:15:15:541:0:0:0,-4.51545,-10 0/0:36.1322:7:7:244:0:0:0,-2.10721,-10 0/1:99:37:20:751:17:631:-10,0,-10 0/0:63.2249:16:16:557:0:0:0,-4.81648,-10 0/1:99:20:11:377:9:329:-10,0,-10 0/0:48.1734:11:11:405:0:0:0,-3.31133,-10 0/0:51.1837:12:12:451:0:0:0,-3.61236,-10 0/0:51.1837:12:12:455:0:0:0,-3.61236,-10 0/0:99:29:29:1097:0:0:0,-8.72987,-10 0/0:90.3175:25:25:913:0:0:0,-7.52575,-10 0/0:93.3277:26:26:964:0:0:0,-7.82678,-10 0/0:72.2558:19:19:686:0:0:0,-5.71957,-10 0/0:60.2146:15:15:523:0:0:0,-4.51545,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:48.1734:11:11:416:0:0:0,-3.31133,-10 0/0:42.1528:9:9:329:0:0:0,-2.70927,-10 0/0:99:31:31:1096:0:0:0,-9.33193,-10 0/0:42.1528:9:9:341:0:0:0,-2.70927,-10 0/0:75.2661:20:20:720:0:0:0,-6.0206,-10 0/0:93.3277:26:26:973:0:0:0,-7.82678,-10 0/0:69.2455:18:18:651:0:0:0,-5.41854,-10 0/0:60.2146:15:15:504:0:0:0,-4.51545,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:66.2352:17:17:578:0:0:0,-5.11751,-10 0/0:72.2558:19:19:668:0:0:0,-5.71957,-10 0/0:42.1528:9:9:338:0:0:0,-2.70927,-10 0/0:18.0704:1:1:38:0:0:0,-0.30103,-3.8 0/0:39.1425:8:8:287:0:0:0,-2.40824,-10 0/0:99:37:37:1337:0:0:0,-10,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:78.2764:21:21:782:0:0:0,-6.32163,-10 0/0:63.2249:16:16:568:0:0:0,-4.81648,-10 0/0:90.3175:25:25:925:0:0:0,-7.52575,-10 0/0:36.1322:7:7:251:0:0:0,-2.10721,-10 0/0:99:30:30:1124:0:0:0,-9.0309,-10 1/1:12.8078:11:0:0:11:407:-10,-3.31133,0 0/0:36.1322:7:7:265:0:0:0,-2.10721,-10 0/0:81.2867:22:22:767:0:0:0,-6.62266,-10 0/0:78.2764:21:21:759:0:0:0,-6.32163,-10 0/0:45.1631:10:10:358:0:0:0,-3.0103,-10 scaffold_186 627757 . T C 58105.2 . AB=0.411765;ABP=4.1599;AC=183;AF=0.994565;AN=184;AO=1925;CIGAR=1X;DP=1938;DPB=1938;DPRA=0;EPP=10.7814;EPPR=3.17734;GTI=0;LEN=1;MEANALT=1;MQM=59.9771;MQMR=60;NS=92;NUMALT=1;ODDS=10.2178;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=70620;QR=446;RO=13;RPP=4113.9;RPPR=16.5402;RUN=1;SAF=1012;SAP=14.0662;SAR=913;SRF=8;SRP=4.51363;SRR=5;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:80.4991:13:0:0:13:471:-10,-3.91339,0 1/1:62.4374:7:0:0:7:254:-10,-2.10721,0 1/1:99:26:0:0:26:967:-10,-7.82678,0 1/1:77.4888:12:0:0:12:444:-10,-3.61236,0 1/1:80.4991:13:0:0:13:484:-10,-3.91339,0 1/1:77.4888:12:0:0:12:449:-10,-3.61236,0 1/1:99:48:1:38:47:1731:-10,-8.9682,0 1/1:99:34:0:0:34:1268:-10,-10,0 1/1:80.4991:13:0:0:13:470:-10,-3.91339,0 1/1:56.4168:5:0:0:5:190:-10,-1.50515,0 1/1:65.4477:8:0:0:8:299:-10,-2.40824,0 1/1:77.4888:12:0:0:12:447:-10,-3.61236,0 1/1:99:31:0:0:31:1144:-10,-9.33193,0 1/1:99:33:0:0:33:1199:-10,-9.93399,0 1/1:99:26:0:0:26:973:-10,-7.82678,0 1/1:99:21:0:0:21:745:-10,-6.32163,0 0/1:99:17:10:354:7:266:-10,0,-10 1/1:62.4374:7:0:0:7:257:-10,-2.10721,0 1/1:99:20:0:0:20:717:-10,-6.0206,0 1/1:99:44:0:0:44:1576:-10,-10,0 1/1:95.5483:18:0:0:18:675:-10,-5.41854,0 1/1:99:32:0:0:32:1172:-10,-9.63296,0 1/1:62.4374:7:0:0:7:261:-10,-2.10721,0 1/1:95.5483:18:0:0:18:650:-10,-5.41854,0 1/1:99:26:0:0:26:963:-10,-7.82678,0 1/1:99:32:1:16:31:1147:-10,-6.52781,0 1/1:98.5563:19:0:0:19:711:-10,-5.71957,0 1/1:80.4991:13:0:0:13:485:-10,-3.91339,0 1/1:92.5392:17:0:0:17:620:-10,-5.11751,0 1/1:99:32:0:0:32:1147:-10,-9.63296,0 1/1:56.4168:5:0:0:5:190:-10,-1.50515,0 1/1:44.3756:1:0:0:1:38:-3.8,-0.30103,0 1/1:99:30:0:0:30:1101:-10,-9.0309,0 1/1:92.5392:17:0:0:17:630:-10,-5.11751,0 1/1:92.5392:17:0:0:17:588:-10,-5.11751,0 1/1:59.4271:6:0:0:6:224:-10,-1.80618,0 1/1:62.4374:7:0:0:7:252:-10,-2.10721,0 1/1:99:31:0:0:31:1150:-10,-9.33193,0 1/1:99:20:0:0:20:751:-10,-6.0206,0 1/1:95.5483:18:0:0:18:652:-10,-5.41854,0 1/1:99:38:0:0:38:1391:-10,-10,0 1/1:99:35:0:0:35:1252:-10,-10,0 1/1:99:29:0:0:29:1088:-10,-8.72987,0 1/1:99:52:0:0:52:1892:-10,-10,0 1/1:99:24:0:0:24:887:-10,-7.22472,0 1/1:92.5392:17:0:0:17:641:-10,-5.11751,0 1/1:99:54:0:0:54:1992:-10,-10,0 1/1:99:33:0:0:33:1223:-10,-9.93399,0 1/1:80.4991:13:0:0:13:487:-10,-3.91339,0 1/1:99:37:0:0:37:1306:-10,-10,0 1/1:74.4785:11:0:0:11:370:-10,-3.31133,0 1/1:99:40:0:0:40:1437:-10,-10,0 1/1:80.4991:13:0:0:13:494:-10,-3.91339,0 1/1:68.458:9:0:0:9:335:-10,-2.70927,0 1/1:99:40:0:0:40:1460:-10,-10,0 1/1:99:21:0:0:21:791:-10,-6.32163,0 1/1:99:22:0:0:22:785:-10,-6.62266,0 1/1:59.4271:6:0:0:6:224:-10,-1.80618,0 1/1:92.5392:17:0:0:17:629:-10,-5.11751,0 1/1:71.4682:10:0:0:10:379:-10,-3.0103,0 1/1:99:33:0:0:33:1193:-10,-9.93399,0 1/1:80.4991:13:0:0:13:493:-10,-3.91339,0 1/1:99:38:0:0:38:1405:-10,-10,0 1/1:92.5392:17:0:0:17:600:-10,-5.11751,0 1/1:92.5392:17:0:0:17:600:-10,-5.11751,0 1/1:99:32:0:0:32:1191:-10,-9.63296,0 1/1:89.5295:16:0:0:16:602:-10,-4.81648,0 1/1:80.4991:13:0:0:13:486:-10,-3.91339,0 1/1:99:42:0:0:42:1550:-10,-10,0 1/1:74.4785:11:0:0:11:412:-10,-3.31133,0 1/1:55.1783:25:1:38:24:900:-10,-2.32781,0 1/1:99:23:0:0:23:863:-10,-6.92369,0 1/1:99:30:0:0:30:1105:-10,-9.0309,0 1/1:77.4888:12:0:0:12:456:-10,-3.61236,0 1/1:99:34:0:0:34:1261:-10,-10,0 1/1:92.5392:17:0:0:17:590:-10,-5.11751,0 1/1:77.4888:12:0:0:12:456:-10,-3.61236,0 1/1:95.5483:18:0:0:18:638:-10,-5.41854,0 1/1:56.4168:5:0:0:5:169:-10,-1.50515,0 1/1:65.4477:8:0:0:8:273:-10,-2.40824,0 1/1:99:28:0:0:28:1044:-10,-8.42884,0 1/1:99:24:0:0:24:858:-10,-7.22472,0 1/1:99:36:0:0:36:1333:-10,-10,0 1/1:99:25:0:0:25:896:-10,-7.52575,0 1/1:99:31:0:0:31:1125:-10,-9.33193,0 1/1:44.3756:1:0:0:1:38:-3.8,-0.30103,0 1/1:80.4991:13:0:0:13:492:-10,-3.91339,0 1/1:99:21:0:0:21:769:-10,-6.32163,0 1/1:59.4271:6:0:0:6:228:-10,-1.80618,0 1/1:80.4991:13:0:0:13:461:-10,-3.91339,0 1/1:86.5195:15:0:0:15:569:-10,-4.51545,0 1/1:99:20:0:0:20:743:-10,-6.0206,0 scaffold_186 652463 . T C 1557.12 . AB=0.673469;ABP=15.8176;AC=8;AF=0.0434783;AN=184;AO=62;CIGAR=1X;DP=1218;DPB=1218;DPRA=0.980702;EPP=8.05372;EPPR=11.6962;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9204;NS=92;NUMALT=1;ODDS=0.974441;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2275;QR=42843;RO=1156;RPP=120.83;RPPR=2418.6;RUN=1;SAF=27;SAP=5.25182;SAR=35;SRF=555;SRP=6.98507;SRR=601;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:31.8631:8:8:302:0:0:0,-2.40824,-10 0/0:37.8837:10:10:376:0:0:0,-3.0103,-10 0/0:52.9352:15:15:532:0:0:0,-4.51545,-10 0/0:43.9043:12:12:447:0:0:0,-3.61236,-10 0/0:25.8425:6:6:228:0:0:0,-1.80618,-10 0/0:25.8425:6:6:228:0:0:0,-1.80618,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:77.0176:23:23:830:0:0:0,-6.92369,-10 0/0:40.894:11:11:411:0:0:0,-3.31133,-10 0/0:10.791:1:1:38:0:0:0,-0.30103,-3.8 0/0:28.8528:7:7:262:0:0:0,-2.10721,-10 0/0:19.8219:4:4:152:0:0:0,-1.20412,-10 0/0:67.9867:20:20:753:0:0:0,-6.0206,-10 0/0:46.9146:13:13:484:0:0:0,-3.91339,-10 0/0:64.9764:19:19:701:0:0:0,-5.71957,-10 0/0:46.9146:13:13:467:0:0:0,-3.91339,-10 0/0:55.9455:16:16:599:0:0:0,-4.81648,-10 0/0:34.8734:9:9:342:0:0:0,-2.70927,-10 0/0:46.9146:13:13:462:0:0:0,-3.91339,-10 0/0:83.0382:25:25:936:0:0:0,-7.52575,-10 0/0:46.9146:13:13:470:0:0:0,-3.91339,-10 0/0:46.9146:13:13:476:0:0:0,-3.91339,-10 0/0:37.8837:10:10:379:0:0:0,-3.0103,-10 0/0:49.9249:14:14:519:0:0:0,-4.21442,-10 0/0:64.9764:19:19:722:0:0:0,-5.71957,-10 0/0:31.8631:8:8:299:0:0:0,-2.40824,-10 0/0:28.8528:7:7:266:0:0:0,-2.10721,-10 0/0:16.8116:3:3:114:0:0:0,-0.90309,-10 0/0:64.9764:19:19:722:0:0:0,-5.71957,-10 0/0:64.9764:19:19:707:0:0:0,-5.71957,-10 0/0:19.8219:4:4:150:0:0:0,-1.20412,-10 0/0:49.9249:14:14:530:0:0:0,-4.21442,-10 0/0:34.8734:9:9:342:0:0:0,-2.70927,-10 0/0:31.8631:8:8:289:0:0:0,-2.40824,-10 0/0:46.9146:13:13:489:0:0:0,-3.91339,-10 0/0:16.8116:3:3:114:0:0:0,-0.90309,-10 0/0:49.9249:14:14:513:0:0:0,-4.21442,-10 0/0:64.9764:19:19:717:0:0:0,-5.71957,-10 0/0:46.9146:13:13:491:0:0:0,-3.91339,-10 0/0:34.8734:9:9:330:0:0:0,-2.70927,-10 0/0:80.0279:24:24:909:0:0:0,-7.22472,-10 0/0:43.9043:12:12:455:0:0:0,-3.61236,-10 0/0:28.8528:7:7:266:0:0:0,-2.10721,-10 0/0:67.9867:20:20:695:0:0:0,-6.0206,-10 0/0:52.9352:15:15:568:0:0:0,-4.51545,-10 0/0:37.8837:10:10:380:0:0:0,-3.0103,-10 0/0:70.997:21:21:782:0:0:0,-6.32163,-10 0/0:80.0279:24:24:889:0:0:0,-7.22472,-10 0/0:49.9249:14:14:529:0:0:0,-4.21442,-10 0/0:95.0776:29:29:1034:0:0:0,-8.72987,-10 0/0:28.8528:7:7:264:0:0:0,-2.10721,-10 0/0:86.0485:26:26:945:0:0:0,-7.82678,-10 0/0:34.8734:9:9:320:0:0:0,-2.70927,-10 0/0:16.8116:3:3:112:0:0:0,-0.90309,-10 0/0:99:32:32:1167:0:0:0,-9.63296,-10 0/0:58.9558:17:17:637:0:0:0,-5.11751,-10 0/0:55.9455:16:16:608:0:0:0,-4.81648,-10 0/0:31.8631:8:8:304:0:0:0,-2.40824,-10 0/0:40.894:11:11:393:0:0:0,-3.31133,-10 0/0:34.8734:9:9:341:0:0:0,-2.70927,-10 0/1:99:17:10:358:7:265:-10,0,-10 0/0:43.9043:12:12:440:0:0:0,-3.61236,-10 0/0:64.9764:19:19:712:0:0:0,-5.71957,-10 0/1:99:15:6:228:9:330:-10,0,-10 0/0:28.8528:7:7:265:0:0:0,-2.10721,-10 0/0:77.0176:23:23:868:0:0:0,-6.92369,-10 0/0:49.9249:14:14:512:0:0:0,-4.21442,-10 0/0:31.8631:8:8:282:0:0:0,-2.40824,-10 0/0:58.9558:17:17:623:0:0:0,-5.11751,-10 1/1:7.33033:14:0:0:14:501:-10,-4.21442,0 0/0:22.8322:5:5:168:0:0:0,-1.50515,-10 0/0:83.0382:25:25:944:0:0:0,-7.52575,-10 0/0:37.8837:10:10:362:0:0:0,-3.0103,-10 0/0:52.9352:15:15:565:0:0:0,-4.51545,-10 0/0:64.9764:19:19:722:0:0:0,-5.71957,-10 0/1:0.0872043:10:0:0:10:348:-10,-3.0103,0 0/0:31.8631:8:8:303:0:0:0,-2.40824,-10 0/0:40.894:11:11:418:0:0:0,-3.31133,-10 0/0:22.8322:5:5:184:0:0:0,-1.50515,-10 0/0:28.8528:7:7:244:0:0:0,-2.10721,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:40.894:11:11:408:0:0:0,-3.31133,-10 0/0:43.9043:12:12:456:0:0:0,-3.61236,-10 0/0:40.894:11:11:418:0:0:0,-3.31133,-10 1/1:10.3406:15:0:0:15:566:-10,-4.51545,0 0/0:28.8528:7:7:234:0:0:0,-2.10721,-10 0/0:19.8219:4:4:148:0:0:0,-1.20412,-10 0/1:0.0108053:7:0:0:7:265:-10,-2.10721,0 0/0:28.8528:7:7:262:0:0:0,-2.10721,-10 0/0:52.9352:15:15:545:0:0:0,-4.51545,-10 0/0:61.9661:18:18:649:0:0:0,-5.41854,-10 0/0:37.8837:10:10:380:0:0:0,-3.0103,-10 scaffold_186 652475 . C T 4173.49 . AB=0.547038;ABP=8.52599;AC=17;AF=0.0923913;AN=184;AO=160;CIGAR=1X;DP=1222;DPB=1222;DPRA=1.52886;EPP=3.49888;EPPR=5.37397;GTI=2;LEN=1;MEANALT=1;MQM=59.5688;MQMR=59.9783;NS=92;NUMALT=1;ODDS=0.459698;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5730;QR=38047;RO=1062;RPP=324.877;RPPR=2197.58;RUN=1;SAF=80;SAP=3.0103;SAR=80;SRF=501;SRP=10.3712;SRR=561;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:30.0441:8:8:298:0:0:0,-2.40824,-10 0/0:36.0647:10:10:347:0:0:0,-3.0103,-10 0/0:51.1162:15:15:531:0:0:0,-4.51545,-10 0/0:42.0853:12:12:437:0:0:0,-3.61236,-10 0/0:24.0235:6:6:194:0:0:0,-1.80618,-10 0/0:24.0235:6:6:226:0:0:0,-1.80618,-10 0/0:99:32:32:1114:0:0:0,-9.63296,-10 0/1:99:23:9:341:14:493:-10,0,-10 0/0:39.075:11:11:404:0:0:0,-3.31133,-10 0/1:1.48143:1:1:38:0:0:0,-0.30103,-3.8 0/0:27.0338:7:7:252:0:0:0,-2.10721,-10 0/1:13.7496:4:3:110:1:16:-0.99794,0,-9.66461 0/0:66.1677:20:20:731:0:0:0,-6.0206,-10 0/0:22.1549:13:12:450:1:16:0,-1.19945,-10 0/1:99:19:6:220:13:479:-10,0,-10 0/0:45.0956:13:13:426:0:0:0,-3.91339,-10 0/0:54.1265:16:16:566:0:0:0,-4.81648,-10 0/0:33.0544:9:9:342:0:0:0,-2.70927,-10 0/0:45.0956:13:13:463:0:0:0,-3.91339,-10 0/0:78.2089:24:24:830:0:0:0,-7.22472,-10 0/0:45.0956:13:13:490:0:0:0,-3.91339,-10 0/0:45.0956:13:13:442:0:0:0,-3.91339,-10 0/0:36.0647:10:10:369:0:0:0,-3.0103,-10 0/0:48.1059:14:14:483:0:0:0,-4.21442,-10 0/0:63.1574:19:19:705:0:0:0,-5.71957,-10 0/1:99:8:4:135:4:152:-10,0,-10 0/0:27.0338:7:7:266:0:0:0,-2.10721,-10 0/0:14.9926:3:3:114:0:0:0,-0.90309,-10 0/0:63.1574:19:19:674:0:0:0,-5.71957,-10 0/0:66.1677:20:20:751:0:0:0,-6.0206,-10 0/0:18.0029:4:4:147:0:0:0,-1.20412,-10 0/0:48.1059:14:14:498:0:0:0,-4.21442,-10 0/0:33.0544:9:9:304:0:0:0,-2.70927,-10 0/0:30.0441:8:8:299:0:0:0,-2.40824,-10 0/0:45.0956:13:13:487:0:0:0,-3.91339,-10 0/0:14.9926:3:3:111:0:0:0,-0.90309,-10 0/0:48.1059:14:14:520:0:0:0,-4.21442,-10 0/0:63.1574:19:19:670:0:0:0,-5.71957,-10 0/0:48.1059:14:14:497:0:0:0,-4.21442,-10 0/0:33.0544:9:9:333:0:0:0,-2.70927,-10 0/0:81.2191:25:25:913:0:0:0,-7.52575,-10 0/0:42.0853:12:12:396:0:0:0,-3.61236,-10 0/0:27.0338:7:7:262:0:0:0,-2.10721,-10 0/0:66.1677:20:20:628:0:0:0,-6.0206,-10 0/0:51.1162:15:15:542:0:0:0,-4.51545,-10 0/1:99:10:5:179:5:190:-10,0,-10 0/1:99:21:10:372:11:416:-10,0,-10 0/1:99:24:10:377:14:506:-10,0,-10 0/1:56.7519:14:1:38:13:472:-10,0,-0.731708 0/1:99:29:18:657:11:383:-10,0,-10 0/0:27.0338:7:7:266:0:0:0,-2.10721,-10 0/1:99:26:11:380:15:559:-10,0,-10 0/0:33.0544:9:9:339:0:0:0,-2.70927,-10 0/0:14.9926:3:3:101:0:0:0,-0.90309,-9.42667 0/1:99:32:18:658:14:505:-10,0,-10 0/0:57.1368:17:17:620:0:0:0,-5.11751,-10 0/1:99:16:9:319:7:262:-10,0,-10 0/0:30.0441:8:8:297:0:0:0,-2.40824,-10 0/0:39.075:11:11:400:0:0:0,-3.31133,-10 0/0:33.0544:9:9:338:0:0:0,-2.70927,-10 0/1:99:17:7:241:10:358:-10,0,-10 0/1:0.117875:12:0:0:12:423:-10,-3.61236,0 0/0:63.1574:19:19:687:0:0:0,-5.71957,-10 0/1:99:15:9:317:6:213:-10,0,-10 0/0:27.0338:7:7:241:0:0:0,-2.10721,-10 0/0:75.1986:23:23:828:0:0:0,-6.92369,-10 0/0:48.1059:14:14:480:0:0:0,-4.21442,-10 0/0:30.0441:8:8:282:0:0:0,-2.40824,-10 0/1:99:17:10:375:7:255:-10,0,-10 0/0:48.1059:14:14:506:0:0:0,-4.21442,-10 0/0:21.0132:5:5:183:0:0:0,-1.50515,-10 0/0:81.2191:25:25:907:0:0:0,-7.52575,-10 0/0:36.0647:10:10:380:0:0:0,-3.0103,-10 0/0:51.1162:15:15:531:0:0:0,-4.51545,-10 0/0:63.1574:19:19:675:0:0:0,-5.71957,-10 0/0:36.0647:10:10:341:0:0:0,-3.0103,-10 0/0:30.0441:8:8:296:0:0:0,-2.40824,-10 0/0:39.075:11:11:362:0:0:0,-3.31133,-10 0/0:21.0132:5:5:188:0:0:0,-1.50515,-10 0/0:27.0338:7:7:233:0:0:0,-2.10721,-10 0/0:78.3151:33:32:1145:1:16:0,-6.81548,-10 0/0:42.0853:12:12:419:0:0:0,-3.61236,-10 0/0:42.0853:12:12:391:0:0:0,-3.61236,-10 0/0:39.075:11:11:403:0:0:0,-3.31133,-10 0/0:51.1162:15:15:512:0:0:0,-4.51545,-10 0/0:27.0338:7:7:247:0:0:0,-2.10721,-10 0/0:18.0029:4:4:152:0:0:0,-1.20412,-10 0/0:27.0338:7:7:261:0:0:0,-2.10721,-10 0/0:27.0338:7:7:266:0:0:0,-2.10721,-10 0/0:51.1162:15:15:518:0:0:0,-4.51545,-10 0/0:35.7931:18:17:634:1:16:0,-2.56327,-10 0/0:36.0647:10:10:349:0:0:0,-3.0103,-10 scaffold_186 735340 . G A 4320.92 . AB=0.482353;ABP=3.70006;AC=15;AF=0.0815217;AN=184;AO=161;CIGAR=1X;DP=1923;DPB=1923;DPRA=1.05563;EPP=4.64228;EPPR=3.11029;GTI=2;LEN=1;MEANALT=1.06667;MQM=60;MQMR=59.9721;NS=92;NUMALT=1;ODDS=1.60869;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5897;QR=63965;RO=1759;RPP=352.617;RPPR=3822.63;RUN=1;SAF=75;SAP=4.64228;SAR=86;SRF=875;SRP=3.11029;SRR=884;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:76.2472:20:20:737:0:0:0,-6.0206,-10 0/1:0.642731:7:0:0:7:249:-10,-2.10721,0 0/1:99:15:8:298:7:266:-10,0,-10 0/0:67.2163:17:17:633:0:0:0,-5.11751,-10 0/0:88.2882:24:24:897:0:0:0,-7.22472,-10 0/0:43.1339:9:9:319:0:0:0,-2.70927,-10 0/0:99:36:36:1307:0:0:0,-10,-10 0/0:99:28:28:1059:0:0:0,-8.42884,-10 0/0:49.1545:11:11:416:0:0:0,-3.31133,-10 0/0:34.103:6:6:182:0:0:0,-1.80618,-10 0/1:0.642731:7:0:0:7:244:-10,-2.10721,0 0/0:25.0721:3:3:113:0:0:0,-0.90309,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/1:99:36:17:591:19:706:-10,0,-10 0/0:97.3174:27:27:987:0:0:0,-8.12781,-10 0/0:85.2777:23:23:835:0:0:0,-6.92369,-10 0/0:91.2983:25:25:883:0:0:0,-7.52575,-10 0/0:34.103:6:6:223:0:0:0,-1.80618,-10 0/0:67.2163:17:17:640:0:0:0,-5.11751,-10 0/1:99:42:23:834:18:651:-10,0,-10 0/0:97.3174:27:27:984:0:0:0,-8.12781,-10 0/1:99:21:10:363:11:418:-10,0,-10 0/0:58.1854:14:14:499:0:0:0,-4.21442,-10 0/1:99:24:15:545:9:339:-10,0,-10 0/0:76.2472:20:20:742:0:0:0,-6.0206,-10 0/0:79.2575:21:21:798:0:0:0,-6.32163,-10 0/0:73.2369:19:19:673:0:0:0,-5.71957,-10 0/0:64.206:16:16:543:0:0:0,-4.81648,-10 0/0:61.1957:15:15:528:0:0:0,-4.51545,-10 0/0:99:38:38:1387:0:0:0,-10,-10 0/0:28.0824:4:4:140:0:0:0,-1.20412,-10 0/0:37.1133:7:7:254:0:0:0,-2.10721,-10 0/0:58.1854:14:14:508:0:0:0,-4.21442,-10 0/0:49.1545:11:11:410:0:0:0,-3.31133,-10 0/0:97.3174:27:27:985:0:0:0,-8.12781,-10 0/0:31.0927:5:5:188:0:0:0,-1.50515,-10 0/0:58.1854:14:14:515:0:0:0,-4.21442,-10 0/1:99:31:23:784:8:304:-10,0,-10 1/1:15.1999:11:0:0:11:417:-10,-3.31133,0 0/0:43.1339:9:9:325:0:0:0,-2.70927,-10 0/0:99:46:46:1706:0:0:0,-10,-10 0/0:85.2777:23:23:864:0:0:0,-6.92369,-10 0/0:76.2472:20:20:707:0:0:0,-6.0206,-10 0/0:94.3081:26:26:945:0:0:0,-7.82678,-10 0/0:97.3174:27:27:987:0:0:0,-8.12781,-10 0/0:40.1236:8:8:303:0:0:0,-2.40824,-10 0/0:99:42:42:1498:0:0:0,-10,-10 0/0:99:34:34:1214:0:0:0,-10,-10 0/0:55.1751:13:13:492:0:0:0,-3.91339,-10 0/0:99:38:38:1371:0:0:0,-10,-10 0/0:61.1957:15:15:552:0:0:0,-4.51545,-10 0/0:99:42:42:1497:0:0:0,-10,-10 0/0:76.2472:20:20:697:0:0:0,-6.0206,-10 0/0:55.1751:13:13:489:0:0:0,-3.91339,-10 0/0:99:42:42:1519:0:0:0,-10,-10 0/0:64.206:16:16:577:0:0:0,-4.81648,-10 0/0:82.2678:22:22:817:0:0:0,-6.62266,-10 0/0:70.2266:18:18:666:0:0:0,-5.41854,-10 0/0:79.2575:21:21:766:0:0:0,-6.32163,-10 0/0:36.7891:15:14:520:1:16:0,-1.73936,-10 0/0:99:34:34:1254:0:0:0,-10,-10 0/0:55.1751:13:13:492:0:0:0,-3.91339,-10 0/0:99:39:39:1395:0:0:0,-10,-10 0/0:61.1957:16:15:546:0:0:0,-4.51545,-10 0/0:58.1854:14:14:499:0:0:0,-4.21442,-10 0/0:99:37:37:1340:0:0:0,-10,-10 0/1:99:26:13:489:13:471:-10,0,-10 0/0:58.1854:14:14:457:0:0:0,-4.21442,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:55.1751:13:13:464:0:0:0,-3.91339,-10 0/0:57.1979:22:21:742:1:15:0,-3.78024,-10 0/0:99:40:40:1475:0:0:0,-10,-10 0/0:97.3174:27:27:992:0:0:0,-8.12781,-10 0/0:64.206:16:16:510:0:0:0,-4.81648,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:58.1854:14:14:518:0:0:0,-4.21442,-10 0/0:49.1545:11:11:409:0:0:0,-3.31133,-10 0/0:55.1751:13:13:485:0:0:0,-3.91339,-10 0/0:34.103:6:6:202:0:0:0,-1.80618,-10 0/0:52.1648:13:12:425:0:0:0,-3.61236,-10 0/0:99:33:33:1227:0:0:0,-9.93399,-10 0/0:99:39:39:1471:0:0:0,-10,-10 0/1:99:24:8:261:16:608:-10,0,-10 0/0:79.2575:21:21:760:0:0:0,-6.32163,-10 0/0:79.2575:21:21:751:0:0:0,-6.32163,-10 0/0:46.1442:10:10:374:0:0:0,-3.0103,-10 0/0:58.1854:14:14:517:0:0:0,-4.21442,-10 0/0:43.1339:9:9:326:0:0:0,-2.70927,-10 0/0:49.1545:11:11:412:0:0:0,-3.31133,-10 0/1:99:22:14:523:8:298:-10,0,-10 0/0:85.2777:23:23:843:0:0:0,-6.92369,-10 1/1:57.3441:25:0:0:25:895:-10,-7.52575,0 scaffold_186 735372 . G A 1441.02 . AB=0.53271;ABP=4.00471;AC=4;AF=0.0217391;AN=184;AO=59;CIGAR=1X;DP=1931;DPB=1931;DPRA=1.39261;EPP=7.46366;EPPR=3.98636;GTI=1;LEN=1;MEANALT=1;MQM=59.8136;MQMR=59.9797;NS=92;NUMALT=1;ODDS=1.89193;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2082;QR=67905;RO=1871;RPP=131.127;RPPR=4013.89;RUN=1;SAF=35;SAP=7.46366;SAR=24;SRF=915;SRP=4.96126;SRR=956;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.6759:20:20:663:0:0:0,-6.0206,-10 0/0:31.542:7:7:212:0:0:0,-2.10721,-10 0/0:55.6244:15:15:568:0:0:0,-4.51545,-10 0/0:61.645:17:17:622:0:0:0,-5.11751,-10 0/0:82.717:24:24:882:0:0:0,-7.22472,-10 0/0:37.5626:9:9:326:0:0:0,-2.70927,-10 0/0:99:37:37:1351:0:0:0,-10,-10 0/1:99:28:14:504:14:482:-10,0,-10 0/0:43.5832:11:11:395:0:0:0,-3.31133,-10 0/0:31.542:7:7:260:0:0:0,-2.10721,-10 0/0:31.542:7:7:257:0:0:0,-2.10721,-10 0/0:19.5008:3:3:113:0:0:0,-0.90309,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:99:36:36:1296:0:0:0,-10,-10 0/0:91.7474:27:27:963:0:0:0,-8.12781,-10 0/0:79.7068:23:23:814:0:0:0,-6.92369,-10 0/0:85.7269:25:25:842:0:0:0,-7.52575,-10 0/0:28.5317:6:6:227:0:0:0,-1.80618,-10 0/0:61.645:17:17:620:0:0:0,-5.11751,-10 0/0:99:42:42:1559:0:0:0,-10,-10 0/0:94.7571:28:28:1021:0:0:0,-8.42884,-10 0/0:73.6862:21:21:793:0:0:0,-6.32163,-10 0/0:52.6141:14:14:511:0:0:0,-4.21442,-10 0/0:82.717:24:24:876:0:0:0,-7.22472,-10 0/0:70.6759:20:20:730:0:0:0,-6.0206,-10 0/0:73.6862:21:21:788:0:0:0,-6.32163,-10 0/0:67.6656:19:19:686:0:0:0,-5.71957,-10 0/0:61.645:17:17:608:0:0:0,-5.11751,-10 0/0:55.6244:15:15:553:0:0:0,-4.51545,-10 0/0:99:38:38:1346:0:0:0,-10,-10 0/0:22.5111:4:4:134:0:0:0,-1.20412,-10 0/0:31.542:7:7:221:0:0:0,-2.10721,-10 0/0:52.6141:14:14:506:0:0:0,-4.21442,-10 0/0:43.5832:11:11:399:0:0:0,-3.31133,-10 0/0:94.7571:28:28:1003:0:0:0,-8.42884,-10 0/0:25.5214:5:5:190:0:0:0,-1.50515,-10 0/0:52.6141:14:14:524:0:0:0,-4.21442,-10 0/0:99:31:31:1109:0:0:0,-9.33193,-10 0/0:43.5832:11:11:396:0:0:0,-3.31133,-10 0/0:37.5626:9:9:314:0:0:0,-2.70927,-10 0/0:99:46:46:1695:0:0:0,-10,-10 0/0:48.7086:22:21:772:1:16:0,-3.68024,-10 0/0:70.6759:20:20:743:0:0:0,-6.0206,-10 0/1:99:26:10:349:16:599:-10,0,-10 0/0:88.7374:27:26:919:0:0:0,-7.82678,-10 0/0:34.5523:8:8:302:0:0:0,-2.40824,-10 0/0:99:42:42:1507:0:0:0,-10,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:49.6038:13:13:487:0:0:0,-3.91339,-10 0/0:99:39:39:1439:0:0:0,-10,-10 0/0:55.6244:15:15:567:0:0:0,-4.51545,-10 0/0:99:42:42:1522:0:0:0,-10,-10 0/0:70.6759:20:20:680:0:0:0,-6.0206,-10 0/0:49.6038:13:13:485:0:0:0,-3.91339,-10 0/0:99:42:41:1510:1:16:0,-9.42001,-10 0/0:58.6347:16:16:586:0:0:0,-4.81648,-10 0/0:76.6965:22:22:800:0:0:0,-6.62266,-10 0/0:64.6553:18:18:637:0:0:0,-5.41854,-10 0/0:73.6862:21:21:717:0:0:0,-6.32163,-10 0/0:55.6244:15:15:533:0:0:0,-4.51545,-10 0/0:99:34:34:1249:0:0:0,-10,-10 0/0:49.6038:13:13:469:0:0:0,-3.91339,-10 0/0:99:39:39:1415:0:0:0,-10,-10 0/0:58.6347:16:16:568:0:0:0,-4.81648,-10 0/1:0.592573:14:0:0:14:493:-10,-4.21442,0 0/0:99:37:37:1324:0:0:0,-10,-10 0/0:88.7374:26:26:985:0:0:0,-7.82678,-10 0/0:52.6141:14:14:507:0:0:0,-4.21442,-10 0/0:99:31:31:1088:0:0:0,-9.33193,-10 0/0:49.6038:13:13:458:0:0:0,-3.91339,-10 0/0:76.6965:22:22:812:0:0:0,-6.62266,-10 0/0:99:41:41:1512:0:0:0,-10,-10 0/0:91.7474:27:27:977:0:0:0,-8.12781,-10 0/0:58.6347:16:16:592:0:0:0,-4.81648,-10 0/0:99:34:34:1267:0:0:0,-10,-10 0/0:52.6141:14:14:507:0:0:0,-4.21442,-10 0/0:43.5832:11:11:412:0:0:0,-3.31133,-10 0/0:49.6038:13:13:493:0:0:0,-3.91339,-10 0/0:28.5317:6:6:181:0:0:0,-1.80618,-10 0/0:49.6038:13:13:460:0:0:0,-3.91339,-10 0/0:99:34:34:1273:0:0:0,-10,-10 0/1:99:39:26:988:13:476:-10,0,-10 0/0:82.717:24:24:884:0:0:0,-7.22472,-10 0/0:73.6862:21:21:755:0:0:0,-6.32163,-10 0/0:73.6862:21:21:764:0:0:0,-6.32163,-10 0/0:40.5729:10:10:344:0:0:0,-3.0103,-10 0/0:52.6141:14:14:523:0:0:0,-4.21442,-10 0/0:37.5626:9:9:300:0:0:0,-2.70927,-10 0/0:43.5832:11:11:409:0:0:0,-3.31133,-10 0/0:76.6965:22:22:808:0:0:0,-6.62266,-10 0/0:79.7068:23:23:821:0:0:0,-6.92369,-10 0/0:85.7269:25:25:930:0:0:0,-7.52575,-10 scaffold_186 748586 . A C 149.399 . AB=0.368421;ABP=5.8675;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1X;DP=1511;DPB=1511;DPRA=1.15885;EPP=3.32051;EPPR=10.9165;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.986;NS=92;NUMALT=1;ODDS=9.99035;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=266;QR=54605;RO=1504;RPP=18.2106;RPPR=3268.9;RUN=1;SAF=4;SAP=3.32051;SAR=3;SRF=789;SRP=10.9165;SRR=715;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:82.5219:14:14:519:0:0:0,-4.21442,-10 0/0:55.4291:5:5:185:0:0:0,-1.50515,-10 0/0:94.5633:18:18:669:0:0:0,-5.41854,-10 0/0:85.5322:15:15:555:0:0:0,-4.51545,-10 0/0:61.4497:7:7:242:0:0:0,-2.10721,-10 0/0:61.4497:7:7:264:0:0:0,-2.10721,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:91.5529:17:17:634:0:0:0,-5.11751,-10 0/0:73.4909:11:11:402:0:0:0,-3.31133,-10 0/0:61.4497:7:7:263:0:0:0,-2.10721,-10 0/0:55.4291:5:5:187:0:0:0,-1.50515,-10 0/0:52.4188:4:4:150:0:0:0,-1.20412,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:99:20:20:729:0:0:0,-6.0206,-10 0/0:88.5425:16:16:588:0:0:0,-4.81648,-10 0/1:99:19:12:424:7:266:-10,0,-10 0/0:73.4909:11:11:404:0:0:0,-3.31133,-10 0/0:94.5633:18:18:666:0:0:0,-5.41854,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/0:67.4703:9:9:276:0:0:0,-2.70927,-10 0/0:99:26:26:922:0:0:0,-7.82678,-10 0/0:55.4291:5:5:189:0:0:0,-1.50515,-10 0/0:99:22:22:834:0:0:0,-6.62266,-10 0/0:91.5529:17:17:609:0:0:0,-5.11751,-10 0/0:99:29:29:1033:0:0:0,-8.72987,-10 0/0:82.5219:14:14:504:0:0:0,-4.21442,-10 0/0:67.4703:9:9:341:0:0:0,-2.70927,-10 0/0:88.5425:16:16:604:0:0:0,-4.81648,-10 0/0:99:23:23:835:0:0:0,-6.92369,-10 0/0:58.4394:6:6:221:0:0:0,-1.80618,-10 0/0:61.4497:7:7:250:0:0:0,-2.10721,-10 0/0:88.5425:16:16:590:0:0:0,-4.81648,-10 0/0:67.4703:9:9:339:0:0:0,-2.70927,-10 0/0:79.5115:13:13:454:0:0:0,-3.91339,-10 0/0:76.5012:12:12:454:0:0:0,-3.61236,-10 0/0:79.5115:13:13:494:0:0:0,-3.91339,-10 0/0:99:27:27:944:0:0:0,-8.12781,-10 0/0:99:20:20:728:0:0:0,-6.0206,-10 0/0:97.5738:19:19:719:0:0:0,-5.71957,-10 0/0:82.5219:14:14:504:0:0:0,-4.21442,-10 0/0:91.5529:17:17:609:0:0:0,-5.11751,-10 0/0:79.5115:13:13:463:0:0:0,-3.91339,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:73.4909:11:11:407:0:0:0,-3.31133,-10 0/0:76.5012:12:12:447:0:0:0,-3.61236,-10 0/0:99:21:21:744:0:0:0,-6.32163,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:79.5115:13:13:455:0:0:0,-3.91339,-10 0/0:99:29:29:1018:0:0:0,-8.72987,-10 0/0:91.5529:17:17:628:0:0:0,-5.11751,-10 0/0:99:28:28:1008:0:0:0,-8.42884,-10 0/0:61.4497:7:7:261:0:0:0,-2.10721,-10 0/0:43.3879:1:1:29:0:0:0,-0.30103,-2.9 0/0:99:29:29:1049:0:0:0,-8.72987,-10 0/0:73.4909:11:11:416:0:0:0,-3.31133,-10 0/0:99:22:22:772:0:0:0,-6.62266,-10 0/0:82.5219:14:14:525:0:0:0,-4.21442,-10 0/0:79.5115:13:13:459:0:0:0,-3.91339,-10 0/0:70.4806:10:10:362:0:0:0,-3.0103,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 0/0:76.5012:12:12:422:0:0:0,-3.61236,-10 0/0:99:25:25:894:0:0:0,-7.52575,-10 0/0:99:20:20:744:0:0:0,-6.0206,-10 0/0:64.46:8:8:300:0:0:0,-2.40824,-10 0/0:99:24:24:872:0:0:0,-7.22472,-10 0/0:94.5633:18:18:610:0:0:0,-5.41854,-10 0/0:94.5633:18:18:666:0:0:0,-5.41854,-10 0/0:99:33:33:1159:0:0:0,-9.93399,-10 0/0:82.5219:14:14:457:0:0:0,-4.21442,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:99:32:32:1112:0:0:0,-9.63296,-10 0/0:70.4806:10:10:377:0:0:0,-3.0103,-10 0/0:82.5219:14:14:509:0:0:0,-4.21442,-10 0/0:99:20:20:716:0:0:0,-6.0206,-10 0/0:94.5633:18:18:657:0:0:0,-5.41854,-10 0/0:79.5115:13:13:462:0:0:0,-3.91339,-10 0/0:67.4703:9:9:334:0:0:0,-2.70927,-10 0/0:67.4703:9:9:331:0:0:0,-2.70927,-10 0/0:61.4497:7:7:262:0:0:0,-2.10721,-10 0/0:99:41:41:1509:0:0:0,-10,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:97.5738:19:19:694:0:0:0,-5.71957,-10 0/0:99:20:20:722:0:0:0,-6.0206,-10 0/0:85.5322:15:15:568:0:0:0,-4.51545,-10 0/0:52.4188:4:4:152:0:0:0,-1.20412,-10 0/0:73.4909:11:11:384:0:0:0,-3.31133,-10 0/0:70.4806:10:10:355:0:0:0,-3.0103,-10 0/0:46.3982:2:2:75:0:0:0,-0.60206,-7.125 0/0:88.5425:16:16:600:0:0:0,-4.81648,-10 0/0:82.5219:14:14:506:0:0:0,-4.21442,-10 0/0:76.5012:12:12:411:0:0:0,-3.61236,-10 scaffold_186 777612 . T C 805.633 . AB=0.767442;ABP=29.7245;AC=3;AF=0.0163043;AN=184;AO=33;CIGAR=1X;DP=1705;DPB=1705;DPRA=0.767549;EPP=6.23461;EPPR=4.17915;GTI=2;LEN=1;MEANALT=1;MQM=37.3636;MQMR=50.5461;NS=92;NUMALT=1;ODDS=7.16929;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1207;QR=61269;RO=1672;RPP=74.6689;RPPR=3633.71;RUN=1;SAF=20;SAP=6.23461;SAR=13;SRF=821;SRP=4.17915;SRR=851;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:71.1226:17:17:629:0:0:0,-5.11751,-10 0/0:59.0814:13:13:489:0:0:0,-3.91339,-10 0/0:99:29:29:1037:0:0:0,-8.72987,-10 0/0:44.0299:8:8:282:0:0:0,-2.40824,-10 0/0:62.0917:14:14:515:0:0:0,-4.21442,-10 0/0:38.0093:6:6:205:0:0:0,-1.80618,-10 0/0:99:36:36:1350:0:0:0,-10,-10 0/0:95.2025:25:25:943:0:0:0,-7.52575,-10 0/0:68.1123:16:16:590:0:0:0,-4.81648,-10 0/0:38.0093:6:6:191:0:0:0,-1.80618,-10 0/0:50.0505:10:10:370:0:0:0,-3.0103,-10 0/0:56.0711:12:12:451:0:0:0,-3.61236,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:86.1738:22:22:825:0:0:0,-6.62266,-10 0/0:99:27:27:998:0:0:0,-8.12781,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/1:99:25:10:372:15:535:-10,0,-10 0/0:41.0196:7:7:261:0:0:0,-2.10721,-10 0/0:89.1838:23:23:836:0:0:0,-6.92369,-10 0/0:92.1935:24:24:839:0:0:0,-7.22472,-10 0/0:56.0711:12:12:446:0:0:0,-3.61236,-10 0/0:99:27:27:1007:0:0:0,-8.12781,-10 0/1:0.000208453:7:0:0:7:257:-10,-2.10721,0 0/0:86.1738:22:22:790:0:0:0,-6.62266,-10 0/0:92.1935:24:24:839:0:0:0,-7.22472,-10 0/0:86.1738:22:22:830:0:0:0,-6.62266,-10 0/0:53.0608:11:11:405:0:0:0,-3.31133,-10 0/0:65.102:15:15:553:0:0:0,-4.51545,-10 0/0:77.1432:19:19:716:0:0:0,-5.71957,-10 0/0:99:29:29:1095:0:0:0,-8.72987,-10 0/0:53.0608:11:11:403:0:0:0,-3.31133,-10 0/0:31.9887:4:4:130:0:0:0,-1.20412,-10 0/0:98.2104:26:26:971:0:0:0,-7.82678,-10 0/0:38.0093:6:6:206:0:0:0,-1.80618,-10 0/0:53.0608:11:11:385:0:0:0,-3.31133,-10 0/0:44.0299:8:8:300:0:0:0,-2.40824,-10 0/0:65.102:15:15:554:0:0:0,-4.51545,-10 0/0:99:34:34:1271:0:0:0,-10,-10 0/0:65.102:15:15:563:0:0:0,-4.51545,-10 0/0:62.0917:14:14:514:0:0:0,-4.21442,-10 0/0:80.1536:20:20:739:0:0:0,-6.0206,-10 0/0:56.0711:12:12:454:0:0:0,-3.61236,-10 0/0:62.0917:14:14:516:0:0:0,-4.21442,-10 0/0:99:32:32:1211:0:0:0,-9.63296,-10 0/0:86.1738:22:22:779:0:0:0,-6.62266,-10 0/0:68.1123:16:16:595:0:0:0,-4.81648,-10 0/0:99:39:39:1464:0:0:0,-10,-10 0/0:65.102:15:15:534:0:0:0,-4.51545,-10 0/0:47.0402:9:9:318:0:0:0,-2.70927,-10 0/0:99:44:44:1601:0:0:0,-10,-10 0/0:56.0711:12:12:445:0:0:0,-3.61236,-10 0/0:99:38:38:1366:0:0:0,-10,-10 0/0:71.1226:17:17:612:0:0:0,-5.11751,-10 0/0:53.0608:11:11:416:0:0:0,-3.31133,-10 0/0:99:41:41:1482:0:0:0,-10,-10 0/1:0.00333645:11:0:0:11:415:-10,-3.31133,0 0/0:83.1637:21:21:787:0:0:0,-6.32163,-10 0/0:53.0608:11:11:405:0:0:0,-3.31133,-10 0/0:68.1123:16:16:597:0:0:0,-4.81648,-10 0/0:65.102:15:15:564:0:0:0,-4.51545,-10 0/0:77.1432:19:19:693:0:0:0,-5.71957,-10 0/0:65.102:15:15:555:0:0:0,-4.51545,-10 0/0:95.2025:25:25:909:0:0:0,-7.52575,-10 0/0:65.102:15:15:555:0:0:0,-4.51545,-10 0/0:41.0196:7:7:265:0:0:0,-2.10721,-10 0/0:99:34:34:1224:0:0:0,-10,-10 0/0:83.1637:21:21:774:0:0:0,-6.32163,-10 0/0:50.0505:10:10:372:0:0:0,-3.0103,-10 0/0:99:32:32:1097:0:0:0,-9.63296,-10 0/0:53.0608:11:11:410:0:0:0,-3.31133,-10 0/0:89.1838:23:23:850:0:0:0,-6.92369,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:99:33:33:1216:0:0:0,-9.93399,-10 0/0:44.0299:8:8:300:0:0:0,-2.40824,-10 0/0:92.1935:24:24:881:0:0:0,-7.22472,-10 0/0:53.0608:11:11:409:0:0:0,-3.31133,-10 0/0:56.0711:12:12:424:0:0:0,-3.61236,-10 0/0:80.1536:20:20:732:0:0:0,-6.0206,-10 0/0:47.0402:9:9:295:0:0:0,-2.70927,-10 0/0:68.1123:16:16:602:0:0:0,-4.81648,-10 0/0:95.2025:25:25:936:0:0:0,-7.52575,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:68.1123:16:16:575:0:0:0,-4.81648,-10 0/0:71.1226:17:17:618:0:0:0,-5.11751,-10 0/0:71.1226:17:17:624:0:0:0,-5.11751,-10 0/0:47.0402:9:9:306:0:0:0,-2.70927,-10 0/0:56.0711:12:12:454:0:0:0,-3.61236,-10 0/0:74.1329:18:18:656:0:0:0,-5.41854,-10 0/0:38.0093:6:6:224:0:0:0,-1.80618,-10 0/0:83.1637:21:21:756:0:0:0,-6.32163,-10 0/0:71.1226:17:17:612:0:0:0,-5.11751,-10 0/0:65.102:15:15:546:0:0:0,-4.51545,-10 scaffold_186 777652 . T A 7037.89 . AB=0.517787;ABP=3.70551;AC=28;AF=0.152174;AN=184;AO=258;CIGAR=1X;DP=1700;DPB=1700;DPRA=1.01998;EPP=11.6289;EPPR=3.26497;GTI=2;LEN=1;MEANALT=1;MQM=37.8605;MQMR=52.4913;NS=92;NUMALT=1;ODDS=0.214343;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9448;QR=52674;RO=1441;RPP=563.25;RPPR=3132.1;RUN=1;SAF=113;SAP=11.6289;SAR=145;SRF=727;SRP=3.26497;SRR=714;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:29.8184:17:0:0:17:606:-10,-5.11751,0 0/0:46.0493:12:12:433:0:0:0,-3.61236,-10 0/1:99:29:16:559:13:493:-10,0,-10 0/0:34.0081:8:8:277:0:0:0,-2.40824,-10 0/0:52.0699:14:14:514:0:0:0,-4.21442,-10 0/1:0.0997622:6:0:0:6:222:-10,-1.80618,0 0/0:99:36:36:1319:0:0:0,-10,-10 0/1:99:25:13:492:12:455:-10,0,-10 0/0:58.0905:16:16:594:0:0:0,-4.81648,-10 0/0:27.9875:6:6:202:0:0:0,-1.80618,-10 0/0:40.0287:10:10:357:0:0:0,-3.0103,-10 0/0:46.0493:12:12:454:0:0:0,-3.61236,-10 0/0:99:31:31:1102:0:0:0,-9.33193,-10 0/0:76.1522:22:22:835:0:0:0,-6.62266,-10 0/1:99:27:15:543:12:454:-10,0,-10 0/0:94.2128:28:28:1049:0:0:0,-8.42884,-10 0/0:85.183:25:25:925:0:0:0,-7.52575,-10 0/0:30.9978:7:7:266:0:0:0,-2.10721,-10 0/0:79.1625:23:23:809:0:0:0,-6.92369,-10 0/0:82.1728:24:24:842:0:0:0,-7.22472,-10 0/0:46.0493:12:12:439:0:0:0,-3.61236,-10 0/0:91.2031:27:27:1000:0:0:0,-8.12781,-10 0/0:30.9978:7:7:253:0:0:0,-2.10721,-10 0/0:76.1522:22:22:785:0:0:0,-6.62266,-10 0/0:79.1625:24:23:810:0:0:0,-6.92369,-10 0/0:76.1522:22:22:820:0:0:0,-6.62266,-10 0/0:43.039:11:11:412:0:0:0,-3.31133,-10 1/1:20.7875:14:0:0:14:529:-10,-4.21442,0 0/0:67.1214:19:19:720:0:0:0,-5.71957,-10 0/0:97.2218:29:29:1084:0:0:0,-8.72987,-10 0/0:43.039:11:11:415:0:0:0,-3.31133,-10 0/0:21.9669:4:4:152:0:0:0,-1.20412,-10 0/0:88.1931:26:26:983:0:0:0,-7.82678,-10 0/0:27.9875:6:6:228:0:0:0,-1.80618,-10 0/0:43.039:11:11:413:0:0:0,-3.31133,-10 0/0:34.0081:8:8:273:0:0:0,-2.40824,-10 0/0:55.0802:15:15:535:0:0:0,-4.51545,-10 0/0:99:33:33:1241:0:0:0,-9.93399,-10 0/0:31.1836:15:14:526:1:16:0,-1.73936,-10 0/0:52.0699:14:14:523:0:0:0,-4.21442,-10 0/0:70.1317:20:20:741:0:0:0,-6.0206,-10 0/0:46.0493:12:12:453:0:0:0,-3.61236,-10 0/0:52.0699:14:14:487:0:0:0,-4.21442,-10 0/0:99:32:32:1201:0:0:0,-9.63296,-10 0/0:76.1522:22:22:755:0:0:0,-6.62266,-10 0/0:58.0905:16:16:584:0:0:0,-4.81648,-10 0/0:99:39:39:1440:0:0:0,-10,-10 1/1:20.7875:14:0:0:14:525:-10,-4.21442,0 1/1:5.736:9:0:0:9:338:-10,-2.70927,0 0/0:99:43:43:1488:0:0:0,-10,-10 0/0:46.0493:12:12:427:0:0:0,-3.61236,-10 0/1:99:38:17:635:21:784:-10,0,-10 0/0:61.1008:17:17:632:0:0:0,-5.11751,-10 0/0:43.039:11:11:417:0:0:0,-3.31133,-10 0/0:99:41:41:1503:0:0:0,-10,-10 0/0:43.039:11:11:396:0:0:0,-3.31133,-10 0/1:99:21:10:330:11:376:-10,0,-10 0/0:43.039:11:11:389:0:0:0,-3.31133,-10 0/0:58.0905:16:16:596:0:0:0,-4.81648,-10 0/0:55.0802:15:15:547:0:0:0,-4.51545,-10 0/1:99:19:8:268:11:364:-10,0,-10 0/0:55.0802:15:15:533:0:0:0,-4.51545,-10 0/1:99:25:18:629:7:264:-10,0,-10 0/1:99:15:7:266:8:302:-10,0,-10 0/1:0.20187:7:0:0:7:266:-10,-2.10721,0 0/0:99:34:34:1236:0:0:0,-10,-10 0/0:73.1419:21:21:763:0:0:0,-6.32163,-10 0/0:40.0287:10:10:367:0:0:0,-3.0103,-10 0/0:99:32:32:1167:0:0:0,-9.63296,-10 0/0:43.039:11:11:416:0:0:0,-3.31133,-10 0/0:79.1625:23:23:846:0:0:0,-6.92369,-10 0/0:91.2031:27:27:972:0:0:0,-8.12781,-10 0/0:99:33:33:1250:0:0:0,-9.93399,-10 0/0:34.0081:8:8:302:0:0:0,-2.40824,-10 0/0:82.1728:24:24:844:0:0:0,-7.22472,-10 0/0:43.039:11:11:418:0:0:0,-3.31133,-10 1/1:14.7669:12:0:0:12:414:-10,-3.61236,0 0/0:70.1317:20:20:713:0:0:0,-6.0206,-10 1/1:5.736:9:0:0:9:309:-10,-2.70927,0 0/0:58.0905:16:16:599:0:0:0,-4.81648,-10 0/1:99:25:12:448:13:484:-10,0,-10 1/1:77.9832:33:0:0:33:1238:-10,-9.93399,0 0/1:99:16:6:217:10:360:-10,0,-10 0/0:61.1008:17:17:617:0:0:0,-5.11751,-10 0/0:61.1008:17:17:630:0:0:0,-5.11751,-10 0/0:37.0184:9:9:324:0:0:0,-2.70927,-10 0/0:46.0493:12:12:442:0:0:0,-3.61236,-10 1/1:32.8287:18:0:0:18:649:-10,-5.41854,0 0/0:27.9875:6:6:228:0:0:0,-1.80618,-10 0/0:73.1419:21:21:784:0:0:0,-6.32163,-10 0/0:61.1008:17:17:632:0:0:0,-5.11751,-10 0/0:55.0802:15:15:558:0:0:0,-4.51545,-10 scaffold_186 840578 . G A 821.705 . AB=0.561404;ABP=4.877;AC=3;AF=0.0164835;AN=182;AO=35;CIGAR=1X;DP=1848;DPB=1848;DPRA=1.34281;EPP=3.07234;EPPR=23.263;GTI=1;LEN=1;MEANALT=1;MQM=41.6571;MQMR=57.3135;NS=91;NUMALT=1;ODDS=7.83502;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1256;QR=66220;RO=1812;RPP=79.0118;RPPR=3937.72;RUN=1;SAF=18;SAP=3.07234;SAR=17;SRF=841;SRP=23.263;SRR=971;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.1274:12:12:415:0:0:0,-3.61236,-10 0/0:34.0347:3:3:102:0:0:0,-0.90309,-9.52 0/0:79.1892:18:18:648:0:0:0,-5.41854,-10 0/0:82.1996:19:19:697:0:0:0,-5.71957,-10 0/0:70.1583:15:15:561:0:0:0,-4.51545,-10 0/0:43.0656:6:6:226:0:0:0,-1.80618,-10 0/0:99:48:48:1762:0:0:0,-10,-10 0/0:76.1789:17:17:630:0:0:0,-5.11751,-10 0/0:70.1583:15:15:569:0:0:0,-4.51545,-10 0/0:34.0347:3:3:113:0:0:0,-0.90309,-10 0/0:55.1068:10:10:352:0:0:0,-3.0103,-10 0/1:0.000134577:8:0:0:8:304:-10,-2.40824,0 0/0:99:35:35:1242:0:0:0,-10,-10 0/0:99:34:33:1206:0:0:0,-9.93399,-10 0/0:99:37:37:1366:0:0:0,-10,-10 0/0:91.231:22:22:789:0:0:0,-6.62266,-10 0/0:99:25:25:908:0:0:0,-7.52575,-10 0/0:67.148:14:14:513:0:0:0,-4.21442,-10 0/0:85.2099:20:20:750:0:0:0,-6.0206,-10 0/0:99:40:40:1501:0:0:0,-10,-10 0/0:67.148:14:14:520:0:0:0,-4.21442,-10 0/0:99:28:28:1039:0:0:0,-8.42884,-10 0/0:46.0759:7:7:232:0:0:0,-2.10721,-10 0/0:58.1171:11:11:418:0:0:0,-3.31133,-10 0/0:55.1068:10:10:369:0:0:0,-3.0103,-10 0/0:91.231:22:22:828:0:0:0,-6.62266,-10 0/0:94.2393:23:23:803:0:0:0,-6.92369,-10 0/0:88.2204:21:21:796:0:0:0,-6.32163,-10 0/0:79.1892:18:18:672:0:0:0,-5.41854,-10 0/0:99:35:35:1251:0:0:0,-10,-10 0/0:34.0347:3:3:104:0:0:0,-0.90309,-9.70667 0/0:61.1274:12:12:454:0:0:0,-3.61236,-10 0/0:70.1583:15:15:554:0:0:0,-4.51545,-10 0/0:55.1068:10:10:368:0:0:0,-3.0103,-10 0/0:88.2204:21:21:773:0:0:0,-6.32163,-10 0/0:49.0862:8:8:295:0:0:0,-2.40824,-10 0/0:61.1274:12:12:405:0:0:0,-3.61236,-10 0/0:99:25:25:859:0:0:0,-7.52575,-10 0/0:88.2204:21:21:751:0:0:0,-6.32163,-10 0/0:73.1686:16:16:578:0:0:0,-4.81648,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:94.2393:23:23:833:0:0:0,-6.92369,-10 0/0:61.1274:12:12:446:0:0:0,-3.61236,-10 0/0:99:46:46:1658:0:0:0,-10,-10 0/1:99:26:14:532:12:432:-10,0,-10 0/0:82.1996:19:19:686:0:0:0,-5.71957,-10 0/0:99:71:71:2570:0:0:0,-10,-10 0/0:88.2204:21:21:762:0:0:0,-6.32163,-10 0/0:79.1892:18:18:675:0:0:0,-5.41854,-10 0/0:99:44:44:1571:0:0:0,-10,-10 0/0:70.1583:15:15:549:0:0:0,-4.51545,-10 0/0:99:49:49:1832:0:0:0,-10,-10 0/0:97.2481:24:24:883:0:0:0,-7.22472,-10 0/0:58.1171:11:11:409:0:0:0,-3.31133,-10 0/0:99:44:44:1652:0:0:0,-10,-10 0/0:61.1274:12:12:427:0:0:0,-3.61236,-10 0/0:85.2099:20:20:704:0:0:0,-6.0206,-10 0/0:37.045:4:4:136:0:0:0,-1.20412,-10 0/0:70.1583:15:15:540:0:0:0,-4.51545,-10 0/0:58.1171:11:11:413:0:0:0,-3.31133,-10 0/0:94.2393:23:23:874:0:0:0,-6.92369,-10 0/0:58.1171:11:11:413:0:0:0,-3.31133,-10 0/0:99:46:46:1707:0:0:0,-10,-10 0/0:88.2204:21:21:761:0:0:0,-6.32163,-10 0/0:73.1686:16:16:592:0:0:0,-4.81648,-10 0/1:99:23:11:413:12:450:-10,0,-10 0/0:67.148:14:14:499:0:0:0,-4.21442,-10 0/0:43.0656:6:6:202:0:0:0,-1.80618,-10 0/0:99:42:41:1507:1:38:0,-7.22001,-10 0/0:58.1171:11:11:411:0:0:0,-3.31133,-10 0/0:60.8462:21:20:752:1:16:0,-3.39941,-10 0/0:99:40:39:1376:1:16:0,-8.83914,-10 0/0:99:25:25:918:0:0:0,-7.52575,-10 .:.:.:.:.:.:.:. 0/0:67.148:14:14:530:0:0:0,-4.21442,-10 0/0:91.231:22:22:829:0:0:0,-6.62266,-10 0/0:49.0862:8:8:298:0:0:0,-2.40824,-10 0/0:61.1274:12:12:418:0:0:0,-3.61236,-10 0/0:52.0965:9:9:318:0:0:0,-2.70927,-10 0/0:55.1068:10:10:360:0:0:0,-3.0103,-10 0/0:99:32:32:1136:0:0:0,-9.63296,-10 0/0:99:36:36:1309:0:0:0,-10,-10 0/0:94.2393:23:23:849:0:0:0,-6.92369,-10 0/0:99:26:26:980:0:0:0,-7.82678,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:40.0553:5:5:189:0:0:0,-1.50515,-10 0/0:85.2099:20:20:741:0:0:0,-6.0206,-10 0/0:61.1274:12:12:455:0:0:0,-3.61236,-10 0/0:43.0656:6:6:226:0:0:0,-1.80618,-10 0/0:70.1583:15:15:515:0:0:0,-4.51545,-10 0/0:52.0965:9:9:335:0:0:0,-2.70927,-10 0/0:64.1377:13:13:439:0:0:0,-3.91339,-10 scaffold_186 899709 . G A 15110.8 . AB=0.486275;ABP=3.84483;AC=48;AF=0.26087;AN=184;AO=537;CIGAR=1X;DP=1922;DPB=1922;DPRA=1.2672;EPP=11.1988;EPPR=3.02443;GTI=2;LEN=1;MEANALT=1.02632;MQM=60;MQMR=59.9422;NS=92;NUMALT=1;ODDS=0.317459;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=19784;QR=50675;RO=1383;RPP=1169.09;RPPR=3006.16;RUN=1;SAF=291;SAP=11.1988;SAR=246;SRF=690;SRP=3.02443;SRR=693;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.843228:20:1:38:19:664:-10,-0.91957,0 1/1:27.9883:11:0:0:11:384:-10,-3.31133,0 1/1:18.2073:24:1:38:23:861:-10,-2.04451,0 0/0:33.2246:18:17:640:1:15:0,-2.66327,-10 0/0:52.3289:16:16:603:0:0:0,-4.81648,-10 0/0:22.2259:6:6:215:0:0:0,-1.80618,-10 0/0:99:58:58:2124:0:0:0,-10,-10 0/1:99:14:5:185:9:341:-10,0,-10 0/0:70.3907:22:22:824:0:0:0,-6.62266,-10 0/0:22.2259:6:6:228:0:0:0,-1.80618,-10 0/0:10.1847:2:2:76:0:0:0,-0.60206,-7.22 0/0:40.2877:12:12:419:0:0:0,-3.61236,-10 1/1:99:40:0:0:40:1452:-10,-10,0 0/0:99:38:38:1412:0:0:0,-10,-10 0/1:99:27:18:658:9:342:-10,0,-10 0/1:99:22:5:190:17:646:-10,0,-10 0/0:64.3701:20:20:745:0:0:0,-6.0206,-10 0/0:22.2259:6:6:227:0:0:0,-1.80618,-10 0/0:79.4216:26:25:943:0:0:0,-7.52575,-10 0/1:99:50:24:899:26:958:-10,0,-10 0/0:46.3083:14:14:531:0:0:0,-4.21442,-10 0/1:99:35:18:683:17:636:-10,0,-10 1/1:24.978:10:0:0:10:380:-10,-3.0103,0 0/0:40.2877:12:12:440:0:0:0,-3.61236,-10 0/0:64.3701:20:20:725:0:0:0,-6.0206,-10 0/0:27.7416:23:22:819:1:36:0,-1.96196,-10 0/0:82.4319:26:26:982:0:0:0,-7.82678,-10 0/0:40.2877:12:12:450:0:0:0,-3.61236,-10 1/1:38.1679:31:1:38:30:1110:-10,-4.04057,0 0/0:80.5117:35:34:1254:1:16:0,-7.39198,-10 0/1:0.191469:2:0:0:2:53:-5.035,-0.60206,0 0/0:28.2465:8:8:304:0:0:0,-2.40824,-10 1/1:43.0398:16:0:0:16:600:-10,-4.81648,0 0/0:40.2877:12:12:450:0:0:0,-3.61236,-10 1/1:64.1119:23:0:0:23:813:-10,-6.92369,0 0/0:16.2053:4:4:130:0:0:0,-1.20412,-10 1/1:9.92647:5:0:0:5:187:-10,-1.50515,0 1/1:99:37:0:0:37:1355:-10,-10,0 0/0:67.3804:21:21:763:0:0:0,-6.32163,-10 0/1:99:15:8:249:7:265:-10,0,-10 0/1:99:26:15:568:11:418:-10,0,-10 0/0:85.4421:27:27:987:0:0:0,-8.12781,-10 1/1:79.1633:28:0:0:28:1037:-10,-8.42884,0 0/0:74.7467:33:32:1180:1:16:0,-6.81548,-10 0/1:99:30:17:643:13:492:-10,0,-10 0/0:58.3495:18:18:626:0:0:0,-5.41854,-10 0/0:99:45:45:1624:0:0:0,-10,-10 0/0:99:35:35:1258:0:0:0,-10,-10 0/1:7.46452:16:15:507:1:38:-0.18764,0,-10 0/1:99:29:17:620:11:394:-10,0,-10 0/0:25.2362:7:7:261:0:0:0,-2.10721,-10 0/0:99:48:48:1723:0:0:0,-10,-10 0/0:46.3083:14:14:509:0:0:0,-4.21442,-10 0/0:40.2877:12:12:447:0:0:0,-3.61236,-10 0/0:99:40:40:1350:0:0:0,-10,-10 0/0:82.4319:26:26:967:0:0:0,-7.82678,-10 0/0:85.4421:27:27:1011:0:0:0,-8.12781,-10 0/0:22.2259:6:6:226:0:0:0,-1.80618,-10 1/1:58.0913:21:0:0:21:797:-10,-6.32163,0 0/0:46.3083:14:14:516:0:0:0,-4.21442,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:58.3495:18:18:652:0:0:0,-5.41854,-10 0/1:99:40:25:877:15:548:-10,0,-10 0/0:43.298:13:13:484:0:0:0,-3.91339,-10 0/0:55.3392:17:17:638:0:0:0,-5.11751,-10 0/1:99:35:16:574:19:717:-10,0,-10 1/1:61.1016:22:0:0:22:809:-10,-6.62266,0 1/1:15.9471:7:0:0:7:264:-10,-2.10721,0 0/1:99:31:14:465:17:637:-10,0,-10 0/0:34.2671:10:10:356:0:0:0,-3.0103,-10 0/0:67.3804:21:21:792:0:0:0,-6.32163,-10 0/0:64.3701:20:20:725:0:0:0,-6.0206,-10 0/0:67.3804:21:21:770:0:0:0,-6.32163,-10 0/0:85.4421:27:27:1006:0:0:0,-8.12781,-10 0/0:73.401:23:23:841:0:0:0,-6.92369,-10 0/0:40.2877:12:12:445:0:0:0,-3.61236,-10 1/1:30.9986:12:0:0:12:456:-10,-3.61236,0 0/0:37.2774:11:11:398:0:0:0,-3.31133,-10 0/0:22.2259:6:6:228:0:0:0,-1.80618,-10 0/0:31.2568:9:9:340:0:0:0,-2.70927,-10 0/1:99:37:23:849:14:508:-10,0,-10 0/1:99:25:10:343:15:558:-10,0,-10 0/0:64.3701:20:20:745:0:0:0,-6.0206,-10 0/1:99:30:16:600:14:531:-10,0,-10 0/0:99:34:34:1243:0:0:0,-10,-10 0/0:13.195:3:3:114:0:0:0,-0.90309,-10 0/0:46.3083:14:14:518:0:0:0,-4.21442,-10 0/0:34.2671:10:10:380:0:0:0,-3.0103,-10 0/1:97.6825:10:3:103:7:264:-10,0,-8.68221 0/0:67.3804:21:21:794:0:0:0,-6.32163,-10 0/1:99:16:11:394:5:186:-10,0,-10 0/0:40.2877:12:12:448:0:0:0,-3.61236,-10 scaffold_186 961028 . C T 440.54 . AB=0.666667;ABP=9.52472;AC=1;AF=0.00543478;AN=184;AO=19;CIGAR=1X;DP=1593;DPB=1593;DPRA=1.48833;EPP=4.03889;EPPR=3.56214;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9949;NS=92;NUMALT=1;ODDS=3.44244;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=675;QR=57813;RO=1574;RPP=44.2683;RPPR=3420.91;RUN=1;SAF=8;SAP=4.03889;SAR=11;SRF=777;SRP=3.56214;SRR=797;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:33.5378:8:8:291:0:0:0,-2.40824,-10 0/0:33.5378:8:8:304:0:0:0,-2.40824,-10 0/0:66.6511:19:19:682:0:0:0,-5.71957,-10 0/0:51.5996:14:14:524:0:0:0,-4.21442,-10 0/0:36.5481:9:9:318:0:0:0,-2.70927,-10 0/0:36.5481:9:9:321:0:0:0,-2.70927,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/1:99:27:9:318:18:659:-10,0,-10 0/0:42.5687:11:11:414:0:0:0,-3.31133,-10 0/0:18.4863:3:3:92:0:0:0,-0.90309,-8.58667 0/0:24.5069:5:5:183:0:0:0,-1.50515,-10 0/0:36.5481:9:9:339:0:0:0,-2.70927,-10 0/0:96.7524:29:29:1072:0:0:0,-8.72987,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:69.6614:20:20:745:0:0:0,-6.0206,-10 0/0:63.6408:18:18:627:0:0:0,-5.41854,-10 0/0:93.743:28:28:999:0:0:0,-8.42884,-10 0/0:39.5584:10:10:372:0:0:0,-3.0103,-10 0/0:90.7331:27:27:958:0:0:0,-8.12781,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:45.579:12:12:444:0:0:0,-3.61236,-10 0/0:93.743:28:28:1021:0:0:0,-8.42884,-10 0/0:39.5584:10:10:378:0:0:0,-3.0103,-10 0/0:66.6511:19:19:687:0:0:0,-5.71957,-10 0/0:63.6408:18:18:633:0:0:0,-5.41854,-10 0/0:72.6717:21:21:739:0:0:0,-6.32163,-10 0/0:63.6408:18:18:662:0:0:0,-5.41854,-10 0/0:45.579:12:12:442:0:0:0,-3.61236,-10 0/0:60.6305:17:17:593:0:0:0,-5.11751,-10 0/0:96.7524:29:29:1095:0:0:0,-8.72987,-10 0/0:27.5172:6:6:215:0:0:0,-1.80618,-10 0/0:30.5275:7:7:266:0:0:0,-2.10721,-10 0/0:36.5481:9:9:341:0:0:0,-2.70927,-10 0/0:48.5893:13:13:482:0:0:0,-3.91339,-10 0/0:63.6408:18:18:674:0:0:0,-5.41854,-10 0/0:15.476:2:2:76:0:0:0,-0.60206,-7.22 0/0:57.6202:16:16:565:0:0:0,-4.81648,-10 0/0:78.6923:23:23:832:0:0:0,-6.92369,-10 0/0:45.579:12:12:452:0:0:0,-3.61236,-10 0/0:72.6717:21:21:792:0:0:0,-6.32163,-10 0/0:93.743:28:28:1036:0:0:0,-8.42884,-10 0/0:75.682:22:22:804:0:0:0,-6.62266,-10 0/0:51.5996:14:14:520:0:0:0,-4.21442,-10 0/0:78.6923:23:23:825:0:0:0,-6.92369,-10 0/0:54.6099:15:15:547:0:0:0,-4.51545,-10 0/0:72.6717:21:21:752:0:0:0,-6.32163,-10 0/0:99:36:36:1344:0:0:0,-10,-10 0/0:75.682:22:22:800:0:0:0,-6.62266,-10 0/0:54.6099:15:15:545:0:0:0,-4.51545,-10 0/0:99:38:38:1410:0:0:0,-10,-10 0/0:51.5996:14:14:528:0:0:0,-4.21442,-10 0/0:93.743:28:28:1022:0:0:0,-8.42884,-10 0/0:45.579:12:12:441:0:0:0,-3.61236,-10 0/0:18.4863:3:3:113:0:0:0,-0.90309,-10 0/0:99:33:33:1248:0:0:0,-9.93399,-10 0/0:60.6305:17:17:633:0:0:0,-5.11751,-10 0/0:75.682:22:22:811:0:0:0,-6.62266,-10 0/0:27.5172:6:6:198:0:0:0,-1.80618,-10 0/0:57.6202:16:16:583:0:0:0,-4.81648,-10 0/0:57.6202:16:16:599:0:0:0,-4.81648,-10 0/0:81.7026:24:24:898:0:0:0,-7.22472,-10 0/0:42.5687:11:11:392:0:0:0,-3.31133,-10 0/0:99:41:41:1505:0:0:0,-10,-10 0/0:66.6511:19:19:698:0:0:0,-5.71957,-10 0/0:54.6099:15:15:540:0:0:0,-4.51545,-10 0/0:53.8214:24:23:835:1:16:0,-4.24451,-10 0/0:66.6511:19:19:713:0:0:0,-5.71957,-10 0/0:39.5584:10:10:373:0:0:0,-3.0103,-10 0/0:72.6717:21:21:789:0:0:0,-6.32163,-10 0/0:36.5481:9:9:327:0:0:0,-2.70927,-10 0/0:51.5996:14:14:499:0:0:0,-4.21442,-10 0/0:84.7128:25:25:921:0:0:0,-7.52575,-10 0/0:78.6923:23:23:857:0:0:0,-6.92369,-10 0/0:54.6099:15:15:558:0:0:0,-4.51545,-10 0/0:78.6923:23:23:810:0:0:0,-6.92369,-10 0/0:39.5584:10:10:380:0:0:0,-3.0103,-10 0/0:48.5893:13:13:490:0:0:0,-3.91339,-10 0/0:42.5687:11:11:415:0:0:0,-3.31133,-10 0/0:24.5069:5:5:190:0:0:0,-1.50515,-10 0/0:33.5378:8:8:281:0:0:0,-2.40824,-10 0/0:90.7331:27:27:1017:0:0:0,-8.12781,-10 0/0:81.7026:24:24:882:0:0:0,-7.22472,-10 0/0:75.682:22:22:799:0:0:0,-6.62266,-10 0/0:78.6923:23:23:862:0:0:0,-6.92369,-10 0/0:63.6408:18:18:684:0:0:0,-5.41854,-10 0/0:18.4863:3:3:105:0:0:0,-0.90309,-9.8 0/0:60.6305:17:17:622:0:0:0,-5.11751,-10 0/0:51.5996:14:14:527:0:0:0,-4.21442,-10 0/0:15.476:2:2:72:0:0:0,-0.60206,-6.84 0/0:51.5996:14:14:532:0:0:0,-4.21442,-10 0/0:42.5687:11:11:416:0:0:0,-3.31133,-10 0/0:57.6202:16:16:583:0:0:0,-4.81648,-10 scaffold_186 963440 . C T 439.453 . AB=0.75;ABP=18.2106;AC=2;AF=0.0108696;AN=184;AO=23;CIGAR=1X;DP=1855;DPB=1855;DPRA=1.00451;EPP=3.86001;EPPR=6.46664;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9514;NS=92;NUMALT=1;ODDS=8.87896;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=734;QR=66492;RO=1832;RPP=52.9542;RPPR=3929.2;RUN=1;SAF=13;SAP=3.86001;SAR=10;SRF=947;SRP=7.5666;SRR=885;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:92.7482:21:21:781:0:0:0,-6.32163,-10 0/0:44.5841:5:5:163:0:0:0,-1.50515,-10 0/0:99:25:25:842:0:0:0,-7.52575,-10 0/0:68.6665:13:13:488:0:0:0,-3.91339,-10 0/0:68.6665:13:13:471:0:0:0,-3.91339,-10 0/0:44.5841:5:5:189:0:0:0,-1.50515,-10 0/0:99:36:36:1332:0:0:0,-10,-10 0/0:99:36:36:1328:0:0:0,-10,-10 0/0:80.7076:17:17:605:0:0:0,-5.11751,-10 0/0:38.5635:3:3:62:0:0:0,-0.90309,-5.78667 0/0:50.6047:7:7:256:0:0:0,-2.10721,-10 0/0:44.5841:5:5:188:0:0:0,-1.50515,-10 0/0:99:40:40:1502:0:0:0,-10,-10 0/0:99:38:37:1349:1:16:0,-8.25936,-10 0/0:99:32:32:1153:0:0:0,-9.63296,-10 0/0:98.7666:23:23:852:0:0:0,-6.92369,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:53.615:8:8:300:0:0:0,-2.40824,-10 0/0:77.6974:16:16:605:0:0:0,-4.81648,-10 0/0:99:39:39:1402:0:0:0,-10,-10 0/0:95.7577:22:22:788:0:0:0,-6.62266,-10 0/0:74.6871:15:15:567:0:0:0,-4.51545,-10 0/0:65.6562:12:12:429:0:0:0,-3.61236,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:74.6871:15:15:546:0:0:0,-4.51545,-10 0/0:99:33:33:1178:0:0:0,-9.93399,-10 0/0:89.7382:20:20:742:0:0:0,-6.0206,-10 0/0:59.6356:10:10:369:0:0:0,-3.0103,-10 0/0:49.3123:15:14:468:1:16:0,-1.73936,-10 0/0:99:41:41:1513:0:0:0,-10,-10 0/0:47.5944:6:6:214:0:0:0,-1.80618,-10 0/0:59.6356:10:10:374:0:0:0,-3.0103,-10 0/0:65.6562:12:12:429:0:0:0,-3.61236,-10 0/0:68.6665:13:13:472:0:0:0,-3.91339,-10 0/0:99:24:24:863:0:0:0,-7.22472,-10 0/0:53.615:8:8:303:0:0:0,-2.40824,-10 0/0:89.7382:20:20:716:0:0:0,-6.0206,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:77.6974:16:16:600:0:0:0,-4.81648,-10 0/0:65.6562:12:12:435:0:0:0,-3.61236,-10 0/0:99:33:33:1202:0:0:0,-9.93399,-10 0/0:89.7382:20:20:746:0:0:0,-6.0206,-10 0/0:86.7281:19:19:649:0:0:0,-5.71957,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:89.7382:20:20:726:0:0:0,-6.0206,-10 0/0:77.6974:16:16:545:0:0:0,-4.81648,-10 0/0:99:34:34:1253:0:0:0,-10,-10 0/0:77.6974:16:16:588:0:0:0,-4.81648,-10 0/0:77.6974:16:16:586:0:0:0,-4.81648,-10 0/0:99:35:35:1196:0:0:0,-10,-10 0/0:77.6974:16:16:553:0:0:0,-4.81648,-10 0/0:99:50:50:1800:0:0:0,-10,-10 0/0:77.6974:16:16:592:0:0:0,-4.81648,-10 0/0:41.5738:4:4:145:0:0:0,-1.20412,-10 0/0:99:32:32:1209:0:0:0,-9.63296,-10 0/0:89.7382:20:20:725:0:0:0,-6.0206,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:65.6562:12:12:456:0:0:0,-3.61236,-10 0/0:77.6974:16:16:560:0:0:0,-4.81648,-10 0/0:56.6253:9:9:329:0:0:0,-2.70927,-10 0/0:95.7577:22:22:808:0:0:0,-6.62266,-10 0/0:99:30:30:1094:0:0:0,-9.0309,-10 0/0:99:31:31:1150:0:0:0,-9.33193,-10 0/0:86.7281:19:19:693:0:0:0,-5.71957,-10 0/0:71.6768:14:14:512:0:0:0,-4.21442,-10 0/0:99:33:33:1227:0:0:0,-9.93399,-10 0/0:99:25:25:899:0:0:0,-7.52575,-10 0/0:62.6459:11:11:401:0:0:0,-3.31133,-10 0/0:98.7666:23:23:815:0:0:0,-6.92369,-10 0/0:53.615:8:8:291:0:0:0,-2.40824,-10 0/0:74.6871:15:15:561:0:0:0,-4.51545,-10 0/0:99:26:26:925:0:0:0,-7.82678,-10 0/0:99:34:34:1235:0:0:0,-10,-10 0/0:89.7382:20:20:746:0:0:0,-6.0206,-10 0/0:99:40:40:1466:0:0:0,-10,-10 0/0:65.6562:12:12:407:0:0:0,-3.61236,-10 0/0:74.6871:15:15:567:0:0:0,-4.51545,-10 0/1:9.02109e-05:11:0:0:11:344:-10,-3.31133,0 0/0:38.5635:3:3:111:0:0:0,-0.90309,-10 0/0:56.6253:9:9:330:0:0:0,-2.70927,-10 0/0:99:34:34:1235:0:0:0,-10,-10 0/0:99:29:29:972:0:0:0,-8.72987,-10 0/1:99:17:7:231:10:358:-10,0,-10 0/0:99:24:24:841:0:0:0,-7.22472,-10 0/0:86.7281:19:19:712:0:0:0,-5.71957,-10 0/0:41.5738:4:4:150:0:0:0,-1.20412,-10 0/0:65.6562:12:12:450:0:0:0,-3.61236,-10 0/0:89.7382:20:20:745:0:0:0,-6.0206,-10 0/0:53.615:8:8:289:0:0:0,-2.40824,-10 0/0:89.7382:20:20:724:0:0:0,-6.0206,-10 0/0:83.7179:18:18:648:0:0:0,-5.41854,-10 0/0:99:25:25:902:0:0:0,-7.52575,-10 scaffold_186 963491 . C T 6006.86 . AB=0.569061;ABP=10.5085;AC=23;AF=0.125;AN=184;AO=221;CIGAR=1X;DP=1614;DPB=1614;DPRA=1.04881;EPP=3.80618;EPPR=3.51573;GTI=1;LEN=1;MEANALT=1;MQM=59.8145;MQMR=59.9375;NS=92;NUMALT=1;ODDS=0.367868;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8020;QR=51122;RO=1392;RPP=457.202;RPPR=2846.05;RUN=1;SAF=109;SAP=3.09873;SAR=112;SRF=706;SRP=3.63429;SRR=686;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.6753:20:20:741:0:0:0,-6.0206,-10 0/0:29.5517:8:8:300:0:0:0,-2.40824,-10 0/0:59.6547:18:18:655:0:0:0,-5.41854,-10 0/0:44.6032:13:13:491:0:0:0,-3.91339,-10 0/0:41.5929:12:12:429:0:0:0,-3.61236,-10 0/0:44.6032:13:13:487:0:0:0,-3.91339,-10 0/0:99:32:32:1213:0:0:0,-9.63296,-10 0/0:89.757:28:28:1012:0:0:0,-8.42884,-10 0/0:38.5826:11:11:414:0:0:0,-3.31133,-10 0/0:26.5414:7:7:244:0:0:0,-2.10721,-10 0/0:41.5929:12:12:430:0:0:0,-3.61236,-10 0/0:23.5311:6:6:228:0:0:0,-1.80618,-10 0/0:71.6959:22:22:809:0:0:0,-6.62266,-10 0/0:89.757:28:28:1005:0:0:0,-8.42884,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:83.7369:26:26:984:0:0:0,-7.82678,-10 0/1:99:19:8:304:11:414:-10,0,-10 0/0:38.5826:11:11:417:0:0:0,-3.31133,-10 0/1:99:17:7:238:10:369:-10,0,-10 0/0:99:35:35:1283:0:0:0,-10,-10 0/0:59.6547:18:18:673:0:0:0,-5.41854,-10 0/0:74.7062:23:23:850:0:0:0,-6.92369,-10 0/0:20.5208:5:5:164:0:0:0,-1.50515,-10 0/0:77.7164:24:24:879:0:0:0,-7.22472,-10 1/1:34.4724:19:0:0:19:689:-10,-5.71957,0 0/1:99:28:14:531:14:487:-10,0,-10 1/1:19.4209:14:0:0:14:526:-10,-4.21442,0 0/0:47.6135:14:14:512:0:0:0,-4.21442,-10 1/1:43.5033:22:0:0:22:820:-10,-6.62266,0 0/1:99:28:13:479:15:541:-10,0,-10 0/0:38.5826:11:11:387:0:0:0,-3.31133,-10 0/1:1.16727:10:0:0:10:356:-10,-3.0103,0 0/0:38.5826:11:11:384:0:0:0,-3.31133,-10 0/0:23.5311:6:6:224:0:0:0,-1.80618,-10 0/0:50.6238:15:15:569:0:0:0,-4.51545,-10 0/0:11.4899:2:2:76:0:0:0,-0.60206,-7.22 0/0:41.5929:12:12:451:0:0:0,-3.61236,-10 0/0:89.757:28:28:981:0:0:0,-8.42884,-10 0/0:29.5517:8:8:304:0:0:0,-2.40824,-10 0/0:56.6444:17:17:621:0:0:0,-5.11751,-10 1/1:49.5239:24:0:0:24:889:-10,-7.22472,0 0/0:65.6753:20:20:759:0:0:0,-6.0206,-10 1/1:16.4106:13:0:0:13:444:-10,-3.91339,0 0/0:95.7755:30:30:1086:0:0:0,-9.0309,-10 0/1:99:11:5:180:6:205:-10,0,-10 0/0:65.6753:20:20:730:0:0:0,-6.0206,-10 0/0:92.7666:29:29:1067:0:0:0,-8.72987,-10 0/0:65.6753:20:20:750:0:0:0,-6.0206,-10 0/0:35.5723:10:10:376:0:0:0,-3.0103,-10 0/1:99:24:12:434:12:433:-10,0,-10 0/0:41.5929:12:12:446:0:0:0,-3.61236,-10 0/0:99:36:36:1298:0:0:0,-10,-10 1/1:10.39:11:0:0:11:387:-10,-3.31133,0 0/0:20.5208:5:5:166:0:0:0,-1.50515,-10 0/0:99:33:33:1185:0:0:0,-9.93399,-10 0/0:17.7257:12:11:367:1:16:0,-0.933179,-10 0/0:59.6547:18:18:661:0:0:0,-5.41854,-10 0/0:47.6135:14:14:496:0:0:0,-4.21442,-10 0/0:41.5929:12:12:428:0:0:0,-3.61236,-10 0/0:65.6753:20:20:727:0:0:0,-6.0206,-10 0/0:71.6959:22:22:829:0:0:0,-6.62266,-10 1/1:19.4209:14:0:0:14:528:-10,-4.21442,0 0/0:99:35:35:1296:0:0:0,-10,-10 0/0:53.6341:16:16:584:0:0:0,-4.81648,-10 0/0:47.6135:14:14:519:0:0:0,-4.21442,-10 0/0:99:37:37:1316:0:0:0,-10,-10 0/0:47.6135:14:14:519:0:0:0,-4.21442,-10 0/0:35.5723:10:10:357:0:0:0,-3.0103,-10 0/1:99:28:12:450:16:597:-10,0,-10 0/0:29.5517:8:8:260:0:0:0,-2.40824,-10 0/0:53.6341:16:16:598:0:0:0,-4.81648,-10 0/0:80.7267:26:25:909:0:0:0,-7.52575,-10 0/0:59.6547:18:18:661:0:0:0,-5.41854,-10 0/0:65.6753:20:20:724:0:0:0,-6.0206,-10 0/0:68.6856:21:21:787:0:0:0,-6.32163,-10 0/0:59.6547:18:18:681:0:0:0,-5.41854,-10 0/0:26.5414:7:7:266:0:0:0,-2.10721,-10 0/0:32.562:9:9:341:0:0:0,-2.70927,-10 0/0:8.47958:1:1:38:0:0:0,-0.30103,-3.8 0/0:29.5517:8:8:301:0:0:0,-2.40824,-10 0/0:99:36:36:1349:0:0:0,-10,-10 0/0:77.7164:24:24:889:0:0:0,-7.22472,-10 0/1:99:16:7:266:9:319:-10,0,-10 0/0:62.665:19:19:679:0:0:0,-5.71957,-10 0/0:53.6341:16:16:589:0:0:0,-4.81648,-10 0/0:29.5517:8:8:304:0:0:0,-2.40824,-10 0/0:65.6753:20:20:750:0:0:0,-6.0206,-10 0/0:62.665:19:19:703:0:0:0,-5.71957,-10 0/0:17.5105:4:4:151:0:0:0,-1.20412,-10 0/0:56.6444:17:17:645:0:0:0,-5.11751,-10 0/0:68.6856:21:21:761:0:0:0,-6.32163,-10 0/0:44.6032:13:13:486:0:0:0,-3.91339,-10 scaffold_186 963504 . A T 4027.26 . AB=0.480447;ABP=3.60473;AC=17;AF=0.0923913;AN=184;AO=147;CIGAR=1X;DP=1615;DPB=1615;DPRA=1.0607;EPP=8.34296;EPPR=9.46251;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9127;NS=92;NUMALT=1;ODDS=1.83606;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5465;QR=53773;RO=1466;RPP=296.691;RPPR=3074.47;RUN=1;SAF=61;SAP=12.2428;SAR=86;SRF=755;SRP=5.87795;SRR=711;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:71.8959:20:20:731:0:0:0,-6.0206,-10 0/0:35.7724:8:8:295:0:0:0,-2.40824,-10 0/0:65.8754:18:18:670:0:0:0,-5.41854,-10 0/0:50.8239:13:13:485:0:0:0,-3.91339,-10 0/1:99:12:7:264:5:190:-10,0,-10 0/0:50.8239:13:13:489:0:0:0,-3.91339,-10 0/0:99:32:32:1215:0:0:0,-9.63296,-10 0/0:95.9738:28:28:1047:0:0:0,-8.42884,-10 0/0:44.8033:11:11:418:0:0:0,-3.31133,-10 0/0:32.7621:7:7:260:0:0:0,-2.10721,-10 0/0:47.8136:12:12:447:0:0:0,-3.61236,-10 0/0:29.7518:6:6:219:0:0:0,-1.80618,-10 0/0:77.9165:22:22:813:0:0:0,-6.62266,-10 0/0:95.9738:28:28:1020:0:0:0,-8.42884,-10 0/0:99:32:32:1151:0:0:0,-9.63296,-10 0/0:89.9566:26:26:980:0:0:0,-7.82678,-10 0/0:68.8856:19:19:722:0:0:0,-5.71957,-10 1/1:8.93482:11:0:0:11:418:-10,-3.31133,0 0/0:62.865:17:17:605:0:0:0,-5.11751,-10 0/0:99:35:35:1251:0:0:0,-10,-10 0/0:65.8754:18:18:682:0:0:0,-5.41854,-10 0/0:80.9267:23:23:856:0:0:0,-6.92369,-10 0/0:26.7415:5:5:190:0:0:0,-1.50515,-10 0/0:83.9369:24:24:902:0:0:0,-7.22472,-10 0/0:68.8856:19:19:690:0:0:0,-5.71957,-10 0/0:95.9738:28:28:1007:0:0:0,-8.42884,-10 0/0:53.8342:14:14:522:0:0:0,-4.21442,-10 0/0:50.8239:14:13:492:0:0:0,-3.91339,-10 0/0:77.9165:22:22:803:0:0:0,-6.62266,-10 0/0:95.9738:28:28:1020:0:0:0,-8.42884,-10 0/0:44.8033:11:11:383:0:0:0,-3.31133,-10 0/0:41.793:10:10:372:0:0:0,-3.0103,-10 0/0:44.8033:11:11:382:0:0:0,-3.31133,-10 0/0:29.7518:6:6:225:0:0:0,-1.80618,-10 0/0:56.8445:15:15:564:0:0:0,-4.51545,-10 0/0:17.7106:2:2:76:0:0:0,-0.60206,-7.22 0/0:47.8136:12:12:436:0:0:0,-3.61236,-10 0/0:95.9738:28:28:948:0:0:0,-8.42884,-10 0/0:35.7724:8:8:304:0:0:0,-2.40824,-10 0/0:62.865:17:17:633:0:0:0,-5.11751,-10 0/0:83.9369:24:24:906:0:0:0,-7.22472,-10 0/0:71.8959:20:20:749:0:0:0,-6.0206,-10 0/0:50.8239:13:13:479:0:0:0,-3.91339,-10 0/0:99:30:30:1063:0:0:0,-9.0309,-10 0/0:44.8033:11:11:401:0:0:0,-3.31133,-10 0/1:99:20:10:343:10:378:-10,0,-10 0/1:99:29:22:792:7:263:-10,0,-10 0/0:71.8959:20:20:734:0:0:0,-6.0206,-10 0/0:41.793:10:10:358:0:0:0,-3.0103,-10 0/0:83.9369:24:24:893:0:0:0,-7.22472,-10 0/0:47.8136:12:12:456:0:0:0,-3.61236,-10 0/0:99:36:36:1291:0:0:0,-10,-10 0/0:44.8033:11:11:406:0:0:0,-3.31133,-10 0/1:0.027939:5:0:0:5:168:-10,-1.50515,0 0/1:99:33:10:334:23:846:-10,0,-10 0/0:47.8136:12:12:426:0:0:0,-3.61236,-10 0/0:65.8754:18:18:667:0:0:0,-5.41854,-10 0/0:53.8342:14:14:528:0:0:0,-4.21442,-10 0/0:47.8136:12:12:439:0:0:0,-3.61236,-10 1/1:36.0275:20:0:0:20:727:-10,-6.0206,0 0/0:77.9165:22:22:826:0:0:0,-6.62266,-10 0/0:53.8342:14:14:528:0:0:0,-4.21442,-10 0/0:99:35:35:1315:0:0:0,-10,-10 0/0:59.8548:16:16:582:0:0:0,-4.81648,-10 0/0:53.8342:14:14:510:0:0:0,-4.21442,-10 0/0:99:37:37:1362:0:0:0,-10,-10 0/0:53.8342:14:14:481:0:0:0,-4.21442,-10 0/0:41.793:10:10:379:0:0:0,-3.0103,-10 0/0:95.9738:28:28:1055:0:0:0,-8.42884,-10 0/0:35.7724:8:8:268:0:0:0,-2.40824,-10 0/0:59.8548:16:16:575:0:0:0,-4.81648,-10 0/0:89.9566:26:26:945:0:0:0,-7.82678,-10 0/0:62.865:18:17:589:0:0:0,-5.11751,-10 0/0:71.8959:20:20:727:0:0:0,-6.0206,-10 0/0:74.9062:21:21:784:0:0:0,-6.32163,-10 0/0:65.8754:18:18:672:0:0:0,-5.41854,-10 0/0:32.7621:7:7:242:0:0:0,-2.10721,-10 0/0:38.7827:9:9:338:0:0:0,-2.70927,-10 0/1:0.00174093:1:0:0:1:38:-3.8,-0.30103,0 0/0:35.7724:8:8:281:0:0:0,-2.40824,-10 0/1:99:36:21:772:15:546:-10,0,-10 0/1:99:24:11:402:13:487:-10,0,-10 0/0:59.8548:16:16:592:0:0:0,-4.81648,-10 0/1:99:19:12:429:7:265:-10,0,-10 0/0:62.865:17:17:620:0:0:0,-5.11751,-10 0/0:35.7724:8:8:300:0:0:0,-2.40824,-10 0/0:71.8959:20:20:731:0:0:0,-6.0206,-10 0/0:68.8856:19:19:714:0:0:0,-5.71957,-10 0/0:23.7312:4:4:148:0:0:0,-1.20412,-10 1/1:26.9966:17:0:0:17:645:-10,-5.11751,0 0/0:74.9062:21:21:772:0:0:0,-6.32163,-10 1/1:14.9554:13:0:0:13:494:-10,-3.91339,0 scaffold_186 963506 . C A 671.786 . AB=0.725;ABP=20.5992;AC=4;AF=0.0217391;AN=184;AO=29;CIGAR=1X;DP=1615;DPB=1615;DPRA=0.55873;EPP=3.08518;EPPR=4.41585;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9317;NS=92;NUMALT=1;ODDS=7.57456;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1065;QR=57856;RO=1582;RPP=65.983;RPPR=3343.4;RUN=1;SAF=14;SAP=3.08518;SAR=15;SRF=798;SRP=3.27933;SRR=784;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:90.0955:20:20:725:0:0:0,-6.0206,-10 0/0:53.9723:8:8:299:0:0:0,-2.40824,-10 0/0:84.0752:18:18:660:0:0:0,-5.41854,-10 0/0:69.0238:13:13:476:0:0:0,-3.91339,-10 0/0:66.0135:12:12:425:0:0:0,-3.61236,-10 0/0:69.0238:13:13:486:0:0:0,-3.91339,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:63.0032:11:11:414:0:0:0,-3.31133,-10 0/1:4.94586e-05:7:0:0:7:252:-10,-2.10721,0 0/0:66.0135:12:12:452:0:0:0,-3.61236,-10 0/1:2.47292e-05:6:0:0:6:206:-10,-1.80618,0 0/0:96.1151:22:22:812:0:0:0,-6.62266,-10 0/0:99:28:27:982:0:0:0,-8.12781,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:99:26:26:987:0:0:0,-7.82678,-10 0/1:99:19:11:410:8:304:-10,0,-10 0/0:63.0032:11:11:412:0:0:0,-3.31133,-10 0/0:81.065:17:17:610:0:0:0,-5.11751,-10 0/0:99:35:35:1223:0:0:0,-10,-10 0/0:84.0752:18:18:674:0:0:0,-5.41854,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:44.9414:5:5:184:0:0:0,-1.50515,-10 0/0:99:24:24:873:0:0:0,-7.22472,-10 0/0:84.0752:19:18:662:0:0:0,-5.41854,-10 0/0:99:28:28:1007:0:0:0,-8.42884,-10 0/0:72.0341:14:14:521:0:0:0,-4.21442,-10 0/0:72.0341:14:14:520:0:0:0,-4.21442,-10 0/0:96.1151:22:22:790:0:0:0,-6.62266,-10 0/0:99:28:28:999:0:0:0,-8.42884,-10 0/0:63.0032:11:11:392:0:0:0,-3.31133,-10 0/0:59.9929:10:10:379:0:0:0,-3.0103,-10 0/0:63.0032:11:11:383:0:0:0,-3.31133,-10 0/0:47.9517:6:6:228:0:0:0,-1.80618,-10 0/0:75.0444:15:15:565:0:0:0,-4.51545,-10 0/0:35.9105:2:2:76:0:0:0,-0.60206,-7.22 0/0:66.0135:12:12:432:0:0:0,-3.61236,-10 0/0:99:28:28:1001:0:0:0,-8.42884,-10 0/0:53.9723:8:8:292:0:0:0,-2.40824,-10 0/0:81.065:17:17:608:0:0:0,-5.11751,-10 0/0:99:24:24:903:0:0:0,-7.22472,-10 0/0:90.0955:20:20:753:0:0:0,-6.0206,-10 0/0:69.0238:13:13:468:0:0:0,-3.91339,-10 0/0:99:30:30:1123:0:0:0,-9.0309,-10 0/0:63.0032:11:11:389:0:0:0,-3.31133,-10 0/0:90.0955:20:20:711:0:0:0,-6.0206,-10 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:90.0955:20:20:689:0:0:0,-6.0206,-10 0/0:59.9929:10:10:371:0:0:0,-3.0103,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:66.0135:12:12:452:0:0:0,-3.61236,-10 0/0:99:36:35:1276:0:0:0,-10,-10 0/0:63.0032:11:11:409:0:0:0,-3.31133,-10 0/0:44.9414:5:5:174:0:0:0,-1.50515,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:66.0135:12:12:433:0:0:0,-3.61236,-10 0/0:84.0752:18:18:640:0:0:0,-5.41854,-10 0/0:72.0341:14:14:496:0:0:0,-4.21442,-10 0/0:66.0135:12:12:422:0:0:0,-3.61236,-10 0/0:90.0955:20:20:729:0:0:0,-6.0206,-10 0/0:96.1151:22:22:833:0:0:0,-6.62266,-10 0/0:72.0341:14:14:499:0:0:0,-4.21442,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:78.0547:16:16:604:0:0:0,-4.81648,-10 0/0:72.0341:14:14:506:0:0:0,-4.21442,-10 0/0:99:37:37:1329:0:0:0,-10,-10 0/0:72.0341:14:14:527:0:0:0,-4.21442,-10 0/0:59.9929:10:10:379:0:0:0,-3.0103,-10 0/0:99:28:28:1055:0:0:0,-8.42884,-10 0/0:53.9723:8:8:282:0:0:0,-2.40824,-10 0/0:78.0547:16:16:571:0:0:0,-4.81648,-10 0/0:99:26:26:916:0:0:0,-7.82678,-10 0/0:84.0752:18:18:661:0:0:0,-5.41854,-10 0/0:90.0955:20:20:719:0:0:0,-6.0206,-10 0/0:93.1055:21:21:796:0:0:0,-6.32163,-10 0/0:84.0752:18:18:669:0:0:0,-5.41854,-10 0/0:50.962:7:7:266:0:0:0,-2.10721,-10 0/0:56.9826:9:9:342:0:0:0,-2.70927,-10 0/0:32.9002:1:1:38:0:0:0,-0.30103,-3.8 0/1:9.89178e-05:8:0:0:8:303:-10,-2.40824,0 0/0:99:36:36:1279:0:0:0,-10,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:78.0547:16:16:597:0:0:0,-4.81648,-10 0/0:87.0854:19:19:675:0:0:0,-5.71957,-10 0/0:78.0547:17:16:576:0:0:0,-4.81648,-10 0/0:53.9723:8:8:300:0:0:0,-2.40824,-10 0/0:90.0955:20:20:724:0:0:0,-6.0206,-10 0/0:87.0854:19:19:693:0:0:0,-5.71957,-10 0/0:41.9311:4:4:138:0:0:0,-1.20412,-10 0/0:81.065:17:17:642:0:0:0,-5.11751,-10 0/0:93.1055:21:21:788:0:0:0,-6.32163,-10 0/0:69.0238:13:13:493:0:0:0,-3.91339,-10 scaffold_186 969363 . G GT 968.434 . AB=0.430108;ABP=6.95631;AC=4;AF=0.0217391;AN=184;AO=41;CIGAR=1M1I8M;DP=1742;DPB=1746.11;DPRA=1.3335;EPP=9.41879;EPPR=9.7429;GTI=0;LEN=1;MEANALT=1.2;MQM=59.0732;MQMR=59.9055;NS=92;NUMALT=1;ODDS=6.31452;PAIRED=0;PAIREDR=0;PAO=1;PQA=36.5;PQR=36.5;PRO=1;QA=1453;QR=60675;RO=1672;RPP=92.0407;RPPR=3633.71;RUN=1;SAF=15;SAP=9.41879;SAR=26;SRF=800;SRP=9.7429;SRR=872;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:69.5899:16:16:586:0:0:0,-4.81648,-10 0|0:48.5178:9:9:314:0:0:0,-2.70927,-10 0|0:99:27:27:950:0:0:0,-8.12781,-10 0|0:51.5281:10:10:356:0:0:0,-3.0103,-10 0|0:48.5178:9:9:324:0:0:0,-2.70927,-10 0|0:51.5281:10:10:375:0:0:0,-3.0103,-10 0|0:99:40:40:1427:0:0:0,-10,-10 0|1:99:21:13:484:8:288:-10,0,-10 0|0:60.559:13:13:483:0:0:0,-3.91339,-10 0|0:30.456:3:3:107:0:0:0,-0.90309,-9.98667 0|0:42.4972:7:7:264:0:0:0,-2.10721,-10 0|0:39.4869:6:6:219:0:0:0,-1.80618,-10 0|0:99:42:41:1506:0:0:0,-10,-10 0|1:99:28:16:581:12:398:-10,0,-10 0|1:99:17:7:243:9:339:-10,0,-10 0|0:61.5766:31:30:1074:1:38:0,-4.04057,-10 0|0:75.6105:18:18:660:0:0:0,-5.41854,-10 0|0:39.4869:6:6:221:0:0:0,-1.80618,-10 0|0:60.559:13:13:485:0:0:0,-3.91339,-10 0|0:99:43:42:1551:0:0:0,-10,-10 0|0:78.6208:20:19:684:0:0:0,-5.71957,-10 0|0:99:26:26:965:0:0:0,-7.82678,-10 0|0:36.4766:5:5:172:0:0:0,-1.50515,-10 0|0:84.6415:21:21:750:0:0:0,-6.32163,-10 0|0:81.6311:20:20:733:0:0:0,-6.0206,-10 0|0:99:26:26:951:0:0:0,-7.82678,-10 0|0:51.5281:11:10:366:0:0:0,-3.0103,-10 0|0:54.5384:11:11:399:0:0:0,-3.31133,-10 0|0:96.6795:25:25:915:0:0:0,-7.52575,-10 0|0:99:31:30:1082:0:0:0,-9.0309,-10 0|0:27.4457:2:2:70:0:0:0,-0.60206,-6.65 0|0:39.4869:6:6:222:0:0:0,-1.80618,-10 0|0:54.5384:11:11:395:0:0:0,-3.31133,-10 0|0:66.5796:15:15:552:0:0:0,-4.51545,-10 0|0:99:27:26:956:0:0:0,-7.82678,-10 0|0:45.5075:8:8:288:0:0:0,-2.40824,-10 0|0:39.4869:6:6:218:0:0:0,-1.80618,-10 0|0:84.6415:21:21:768:0:0:0,-6.32163,-10 0|0:63.5693:14:14:515:0:0:0,-4.21442,-10 0|0:66.5796:15:15:552:0:0:0,-4.51545,-10 0|0:93.6707:24:24:849:0:0:0,-7.22472,-10 0|0:66.5796:15:15:559:0:0:0,-4.51545,-10 0|0:93.6707:25:24:893:0:0:0,-7.22472,-10 0|0:99:39:38:1373:0:0:0,-10,-10 0|0:90.6612:23:23:845:0:0:0,-6.92369,-10 0|0:45.5075:8:8:294:0:0:0,-2.40824,-10 0|0:99:44:44:1568:0:0:0,-10,-10 0|0:93.6707:25:24:862:0:0:0,-7.22472,-10 0|0:69.5899:17:16:581:0:0:0,-4.81648,-10 0|0:99:33:33:1195:0:0:0,-9.93399,-10 0|0:60.559:13:13:462:0:0:0,-3.91339,-10 0|0:99:36:36:1305:0:0:0,-10,-10 0|0:54.5384:13:11:400:0:0:0,-3.31133,-10 0|0:33.4663:4:4:149:0:0:0,-1.20412,-10 0|0:99:29:28:1042:0:0:0,-8.42884,-10 0|0:51.5281:10:10:358:0:0:0,-3.0103,-10 0|0:96.6795:28:25:898:0:0:0,-7.52575,-10 0|0:30.456:3:3:114:0:0:0,-0.90309,-10 0|0:57.5487:13:12:438:0:0:0,-3.61236,-10 0|0:54.5384:11:11:389:0:0:0,-3.31133,-10 0|0:99:32:30:1102:0:0:0,-9.0309,-10 0|0:57.5487:12:12:435:0:0:0,-3.61236,-10 0|0:99:36:36:1283:0:0:0,-10,-10 0|0:75.6105:18:18:627:0:0:0,-5.41854,-10 0|0:54.5384:11:11:393:0:0:0,-3.31133,-10 0|0:90.6612:23:23:797:0:0:0,-6.92369,-10 0|0:99:26:26:949:0:0:0,-7.82678,-10 0|0:63.5693:16:14:501:0:0:0,-4.21442,-10 0|0:99:36:36:1309:0:0:0,-10,-10 0|0:69.5899:16:16:581:0:0:0,-4.81648,-10 0|0:72.6002:17:17:621:0:0:0,-5.11751,-10 0|0:99:31:30:1106:0:0:0,-9.0309,-10 0|0:99:39:38:1376:0:0:0,-10,-10 0|0:63.5693:14:14:520:0:0:0,-4.21442,-10 0|0:93.6707:24:24:856:0:0:0,-7.22472,-10 0|0:75.6105:18:18:640:0:0:0,-5.41854,-10 0|0:78.6208:20:19:681:0:0:0,-5.71957,-10 0|0:51.5281:10:10:372:0:0:0,-3.0103,-10 0|0:45.5075:8:8:291:0:0:0,-2.40824,-10 0|0:42.4972:7:7:261:0:0:0,-2.10721,-10 0|0:99:44:43:1538:0:0:0,-10,-10 0|1:99:27:16:579:11:390:-10,0,-10 0|0:81.6311:21:20:723:0:0:0,-6.0206,-10 0|0:60.559:13:13:482:0:0:0,-3.91339,-10 0|0:99:29:29:1053:0:0:0,-8.72987,-10 0|0:48.5178:9:9:332:0:0:0,-2.70927,-10 0|0:54.5384:11:11:403:0:0:0,-3.31133,-10 0|0:51.5281:10:10:365:0:0:0,-3.0103,-10 0|0:45.5075:8:8:287:0:0:0,-2.40824,-10 0|0:75.6105:19:18:661:0:0:0,-5.41854,-10 0|0:78.6208:19:19:703:0:0:0,-5.71957,-10 0|0:63.5693:15:14:511:0:0:0,-4.21442,-10 scaffold_186 1000269 . G A 2268.01 . AB=0.353612;ABP=51.9634;AC=11;AF=0.0604396;AN=182;AO=93;CIGAR=1X;DP=1315;DPB=1315;DPRA=1.81818;EPP=3.59403;EPPR=4.61221;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8016;NS=91;NUMALT=1;ODDS=2.63349;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3317;QR=44369;RO=1220;RPP=204.957;RPPR=2652.21;RUN=1;SAF=49;SAP=3.59403;SAR=44;SRF=625;SRP=4.61221;SRR=595;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.5875:18:18:645:0:0:0,-5.41854,-10 0/0:30.4845:8:8:302:0:0:0,-2.40824,-10 0/0:42.5257:12:12:423:0:0:0,-3.61236,-10 0/0:18.4433:4:4:151:0:0:0,-1.20412,-10 0/0:63.5978:19:19:715:0:0:0,-5.71957,-10 0/0:33.4948:9:9:295:0:0:0,-2.70927,-10 0/0:54.5669:16:16:573:0:0:0,-4.81648,-10 0/1:99:13:7:266:6:184:-10,0,-10 0/0:42.5257:12:12:450:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0/0:21.4536:5:5:168:0:0:0,-1.50515,-10 0/0:21.4536:5:5:167:0:0:0,-1.50515,-10 0/1:99:38:21:776:17:583:-10,0,-10 0/1:99:22:7:266:15:547:-10,0,-10 0/1:99:34:23:772:11:392:-10,0,-10 0/0:87.6794:27:27:959:0:0:0,-8.12781,-10 0/1:99:22:17:587:5:187:-10,0,-10 0/0:48.5463:14:14:519:0:0:0,-4.21442,-10 0/0:54.5669:17:16:561:0:0:0,-4.81648,-10 0/0:63.5978:19:19:691:0:0:0,-5.71957,-10 0/0:39.5154:11:11:418:0:0:0,-3.31133,-10 0/0:57.5772:17:17:645:0:0:0,-5.11751,-10 0/0:45.536:13:13:463:0:0:0,-3.91339,-10 0/0:69.6183:21:21:786:0:0:0,-6.32163,-10 0/0:45.536:13:13:479:0:0:0,-3.91339,-10 0/0:90.6901:28:28:1011:0:0:0,-8.42884,-10 0/0:72.6286:22:22:809:0:0:0,-6.62266,-10 0/0:30.4845:8:8:299:0:0:0,-2.40824,-10 0/0:27.4742:7:7:236:0:0:0,-2.10721,-10 0/0:90.6901:28:28:1043:0:0:0,-8.42884,-10 0/0:63.5978:19:19:695:0:0:0,-5.71957,-10 0/0:27.4742:7:7:266:0:0:0,-2.10721,-10 0/0:30.4845:8:8:293:0:0:0,-2.40824,-10 0/0:18.4433:4:4:152:0:0:0,-1.20412,-10 0/0:60.5875:18:18:632:0:0:0,-5.41854,-10 0/0:24.4639:6:6:204:0:0:0,-1.80618,-10 0/0:21.4536:5:5:180:0:0:0,-1.50515,-10 0/0:42.5257:12:12:431:0:0:0,-3.61236,-10 0/0:24.4639:6:6:223:0:0:0,-1.80618,-10 0/0:18.4433:4:4:151:0:0:0,-1.20412,-10 0/0:60.5875:18:18:674:0:0:0,-5.41854,-10 0/0:42.5257:12:12:452:0:0:0,-3.61236,-10 0/0:33.4948:9:9:317:0:0:0,-2.70927,-10 0/0:60.5875:18:18:672:0:0:0,-5.41854,-10 0/1:58.1184:19:16:572:3:113:-7.81342,0,-10 0/0:60.5875:18:18:654:0:0:0,-5.41854,-10 0/0:93.7001:29:29:1081:0:0:0,-8.72987,-10 0/0:66.6081:20:20:723:0:0:0,-6.0206,-10 0/0:45.536:13:13:474:0:0:0,-3.91339,-10 0/0:99:34:33:1162:0:0:0,-9.93399,-10 0/0:39.5154:11:11:371:0:0:0,-3.31133,-10 0/1:99:33:28:1012:5:188:-10,0,-10 0/0:60.5875:18:18:657:0:0:0,-5.41854,-10 0/0:18.4433:4:4:152:0:0:0,-1.20412,-10 0/0:69.6183:21:21:746:0:0:0,-6.32163,-10 0/0:36.5051:10:10:375:0:0:0,-3.0103,-10 0/0:69.6183:21:21:786:0:0:0,-6.32163,-10 0/0:18.4433:4:4:151:0:0:0,-1.20412,-10 0/0:33.4948:9:9:338:0:0:0,-2.70927,-10 0/0:21.4536:5:5:182:0:0:0,-1.50515,-10 0/0:48.5463:14:14:476:0:0:0,-4.21442,-10 0/0:24.4639:6:6:221:0:0:0,-1.80618,-10 0/0:99:35:35:1217:0:0:0,-10,-10 0/0:33.4948:9:9:340:0:0:0,-2.70927,-10 0/0:30.4845:8:8:290:0:0:0,-2.40824,-10 0/1:99:31:23:868:8:295:-10,0,-10 0/0:48.5463:14:14:527:0:0:0,-4.21442,-10 0/0:18.4433:4:4:152:0:0:0,-1.20412,-10 0/1:99:19:13:493:6:224:-10,0,-10 0/0:33.4948:9:9:316:0:0:0,-2.70927,-10 0/0:54.5669:16:16:599:0:0:0,-4.81648,-10 0/0:36.5051:10:10:370:0:0:0,-3.0103,-10 0/0:51.5566:15:15:566:0:0:0,-4.51545,-10 0/0:24.4639:6:6:226:0:0:0,-1.80618,-10 0/0:45.536:13:13:493:0:0:0,-3.91339,-10 0/0:27.4742:7:7:262:0:0:0,-2.10721,-10 0/0:27.4742:7:7:263:0:0:0,-2.10721,-10 0/0:36.5051:10:10:334:0:0:0,-3.0103,-10 0/0:12.4227:2:2:76:0:0:0,-0.60206,-7.22 0/0:33.4948:9:9:337:0:0:0,-2.70927,-10 0/0:69.6183:21:21:747:0:0:0,-6.32163,-10 0/1:99:25:14:473:11:398:-10,0,-10 0/0:54.5669:16:16:605:0:0:0,-4.81648,-10 0/0:30.4845:8:8:304:0:0:0,-2.40824,-10 0/0:30.4845:8:8:304:0:0:0,-2.40824,-10 0/1:65.8845:7:1:38:6:206:-10,0,-2.53789 0/0:63.5978:19:19:717:0:0:0,-5.71957,-10 0/0:69.6183:21:21:770:0:0:0,-6.32163,-10 0/0:36.5051:10:10:354:0:0:0,-3.0103,-10 0/0:48.5463:14:14:484:0:0:0,-4.21442,-10 0/0:51.5566:15:15:552:0:0:0,-4.51545,-10 0/0:36.5051:10:10:342:0:0:0,-3.0103,-10 scaffold_186 1000313 . T C 107.078 . AB=0.291667;ABP=12.0581;AC=1;AF=0.00549451;AN=182;AO=7;CIGAR=1X;DP=1335;DPB=1335;DPRA=1.6476;EPP=10.7656;EPPR=4.03304;GTI=0;LEN=1;MEANALT=2;MQM=60;MQMR=59.8222;NS=91;NUMALT=1;ODDS=9.78327;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=49048;RO=1327;RPP=18.2106;RPPR=2806.91;RUN=1;SAF=6;SAP=10.7656;SAR=1;SRF=667;SRP=3.09048;SRR=660;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:90.6536:18:18:654:0:0:0,-5.41854,-10 0/0:63.5611:9:9:335:0:0:0,-2.70927,-10 0/0:78.6126:14:14:503:0:0:0,-4.21442,-10 0/0:48.5096:4:4:151:0:0:0,-1.20412,-10 0/0:93.6637:19:19:710:0:0:0,-5.71957,-10 0/0:63.5611:9:9:307:0:0:0,-2.70927,-10 0/0:87.6434:17:17:613:0:0:0,-5.11751,-10 0/0:75.6023:13:13:489:0:0:0,-3.91339,-10 0/0:72.592:12:12:421:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0/0:51.5199:5:5:186:0:0:0,-1.50515,-10 0/0:51.5199:5:5:189:0:0:0,-1.50515,-10 0/0:99:38:38:1377:0:0:0,-10,-10 0/0:99:22:22:833:0:0:0,-6.62266,-10 0/0:99:34:34:1234:0:0:0,-10,-10 0/0:99:27:27:968:0:0:0,-8.12781,-10 0/0:99:23:23:864:0:0:0,-6.92369,-10 0/0:81.6229:15:15:566:0:0:0,-4.51545,-10 0/0:87.6434:17:17:629:0:0:0,-5.11751,-10 0/0:93.6637:19:19:700:0:0:0,-5.71957,-10 0/0:69.5817:11:11:417:0:0:0,-3.31133,-10 0/0:90.6536:18:18:684:0:0:0,-5.41854,-10 0/0:78.6126:14:14:525:0:0:0,-4.21442,-10 0/0:99:21:21:789:0:0:0,-6.32163,-10 0/0:75.6023:13:13:471:0:0:0,-3.91339,-10 0/0:99:28:28:1008:0:0:0,-8.42884,-10 0/0:99:22:22:811:0:0:0,-6.62266,-10 0/0:60.5508:8:8:302:0:0:0,-2.40824,-10 0/0:57.5405:7:7:240:0:0:0,-2.10721,-10 0/0:99:29:29:1094:0:0:0,-8.72987,-10 0/0:93.6637:19:19:695:0:0:0,-5.71957,-10 0/0:57.5405:7:7:244:0:0:0,-2.10721,-10 0/0:60.5508:8:8:280:0:0:0,-2.40824,-10 0/0:48.5096:4:4:151:0:0:0,-1.20412,-10 0/0:90.6536:18:18:662:0:0:0,-5.41854,-10 0/0:54.5302:6:6:228:0:0:0,-1.80618,-10 0/0:54.5302:6:6:228:0:0:0,-1.80618,-10 0/0:72.592:12:12:430:0:0:0,-3.61236,-10 0/0:57.5405:7:7:253:0:0:0,-2.10721,-10 0/0:51.5199:5:5:189:0:0:0,-1.50515,-10 0/0:93.6637:19:19:709:0:0:0,-5.71957,-10 0/0:72.592:12:12:455:0:0:0,-3.61236,-10 0/0:63.5611:9:9:322:0:0:0,-2.70927,-10 0/0:90.6536:18:18:666:0:0:0,-5.41854,-10 0/0:93.6637:19:19:689:0:0:0,-5.71957,-10 0/0:93.6637:19:19:671:0:0:0,-5.71957,-10 0/0:99:29:29:1081:0:0:0,-8.72987,-10 0/0:96.6735:20:20:737:0:0:0,-6.0206,-10 0/0:75.6023:13:13:482:0:0:0,-3.91339,-10 0/0:99:36:36:1288:0:0:0,-10,-10 0/0:69.5817:11:11:370:0:0:0,-3.31133,-10 0/0:99:34:34:1287:0:0:0,-10,-10 0/0:90.6536:18:18:679:0:0:0,-5.41854,-10 0/0:48.5096:4:4:152:0:0:0,-1.20412,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:69.5817:11:11:406:0:0:0,-3.31133,-10 0/0:99:21:21:795:0:0:0,-6.32163,-10 0/0:48.5096:4:4:128:0:0:0,-1.20412,-10 0/0:63.5611:9:9:342:0:0:0,-2.70927,-10 0/0:51.5199:5:5:188:0:0:0,-1.50515,-10 0/0:78.6126:14:14:511:0:0:0,-4.21442,-10 0/0:54.5302:6:6:223:0:0:0,-1.80618,-10 0/0:99:35:35:1272:0:0:0,-10,-10 0/0:63.5611:9:9:342:0:0:0,-2.70927,-10 0/0:60.5508:8:8:303:0:0:0,-2.40824,-10 0/0:99:31:31:1171:0:0:0,-9.33193,-10 0/0:78.6126:14:14:523:0:0:0,-4.21442,-10 0/0:48.5096:4:4:152:0:0:0,-1.20412,-10 0/0:93.6637:19:19:717:0:0:0,-5.71957,-10 0/0:63.5611:9:9:339:0:0:0,-2.70927,-10 0/0:84.6332:16:16:600:0:0:0,-4.81648,-10 0/0:69.5817:11:11:418:0:0:0,-3.31133,-10 0/0:81.6229:15:15:568:0:0:0,-4.51545,-10 0/0:54.5302:6:6:206:0:0:0,-1.80618,-10 0/0:75.6023:13:13:493:0:0:0,-3.91339,-10 0/0:57.5405:7:7:266:0:0:0,-2.10721,-10 0/0:57.5405:7:7:259:0:0:0,-2.10721,-10 0/0:66.5714:10:10:374:0:0:0,-3.0103,-10 0/0:42.489:2:2:76:0:0:0,-0.60206,-7.22 0/0:63.5611:9:9:340:0:0:0,-2.70927,-10 0/0:99:21:21:781:0:0:0,-6.32163,-10 0/1:99:24:16:605:7:242:-10,0,-10 0/0:84.6332:16:16:607:0:0:0,-4.81648,-10 0/0:60.5508:8:8:302:0:0:0,-2.40824,-10 0/0:63.5611:9:9:340:0:0:0,-2.70927,-10 0/0:57.5405:7:7:264:0:0:0,-2.10721,-10 0/0:96.6735:20:20:735:0:0:0,-6.0206,-10 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:66.5714:10:10:374:0:0:0,-3.0103,-10 0/0:78.6126:14:14:524:0:0:0,-4.21442,-10 0/0:81.6229:15:15:557:0:0:0,-4.51545,-10 0/0:66.5714:10:10:377:0:0:0,-3.0103,-10 scaffold_186 1100344 . G A 739.944 . AB=0.537037;ABP=3.6537;AC=2;AF=0.010989;AN=182;AO=30;CIGAR=1X;DP=1846;DPB=1846;DPRA=2.07264;EPP=4.16842;EPPR=12.6958;GTI=1;LEN=1;MEANALT=1;MQM=58.7;MQMR=59.9075;NS=91;NUMALT=1;ODDS=3.44997;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1061;QR=66347;RO=1816;RPP=68.1545;RPPR=3911.74;RUN=1;SAF=13;SAP=4.16842;SAR=17;SRF=957;SRP=14.4942;SRR=859;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.9326:18:18:676:0:0:0,-5.41854,-10 0/0:39.8297:8:8:280:0:0:0,-2.40824,-10 0/0:87.9941:24:24:854:0:0:0,-7.22472,-10 0/0:66.9223:17:17:622:0:0:0,-5.11751,-10 0/0:66.9223:17:17:643:0:0:0,-5.11751,-10 0/0:51.8709:12:12:456:0:0:0,-3.61236,-10 0/1:99:54:25:893:29:1046:-10,0,-10 0/0:84.984:23:23:797:0:0:0,-6.92369,-10 0/0:54.8812:13:13:468:0:0:0,-3.91339,-10 0/0:30.7988:5:5:190:0:0:0,-1.50515,-10 0/0:42.84:9:9:339:0:0:0,-2.70927,-10 0/0:36.8194:7:7:262:0:0:0,-2.10721,-10 0/0:99:34:34:1258:0:0:0,-10,-10 0/0:97.0224:27:27:1008:0:0:0,-8.12781,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 0/0:75.9532:20:20:734:0:0:0,-6.0206,-10 0/0:66.9223:17:17:605:0:0:0,-5.11751,-10 0/0:36.8194:7:7:259:0:0:0,-2.10721,-10 0/0:72.9429:19:19:695:0:0:0,-5.71957,-10 0/0:99:42:42:1551:0:0:0,-10,-10 0/0:69.9326:18:18:665:0:0:0,-5.41854,-10 0/0:84.984:23:23:847:0:0:0,-6.92369,-10 0/0:39.8297:8:8:304:0:0:0,-2.40824,-10 0/0:39.8297:8:8:304:0:0:0,-2.40824,-10 0/0:99:30:30:1137:0:0:0,-9.0309,-10 0/0:91.004:25:25:936:0:0:0,-7.52575,-10 0/0:69.9326:18:18:645:0:0:0,-5.41854,-10 .:.:.:.:.:.:.:. 0/0:84.984:23:23:841:0:0:0,-6.92369,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:21.7679:2:2:76:0:0:0,-0.60206,-7.22 0/0:54.8812:13:13:445:0:0:0,-3.91339,-10 0/0:91.004:25:25:893:0:0:0,-7.52575,-10 0/0:45.8503:10:10:334:0:0:0,-3.0103,-10 0/0:60.9018:15:15:520:0:0:0,-4.51545,-10 0/0:21.7679:2:2:74:0:0:0,-0.60206,-7.03 0/0:60.9018:15:15:565:0:0:0,-4.51545,-10 0/0:97.0224:27:27:1003:0:0:0,-8.12781,-10 0/0:63.9121:16:16:596:0:0:0,-4.81648,-10 0/0:66.9223:17:17:503:0:0:0,-5.11751,-10 0/0:97.0224:27:27:996:0:0:0,-8.12781,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:97.0224:27:27:1000:0:0:0,-8.12781,-10 0/0:99:34:34:1223:0:0:0,-10,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:45.8503:10:10:373:0:0:0,-3.0103,-10 0/0:99:42:42:1527:0:0:0,-10,-10 0/0:99:28:28:1043:0:0:0,-8.42884,-10 0/0:87.9941:24:24:892:0:0:0,-7.22472,-10 0/0:99:44:44:1611:0:0:0,-10,-10 0/0:60.9018:15:15:567:0:0:0,-4.51545,-10 0/0:99:40:40:1435:0:0:0,-10,-10 0/0:54.8812:13:13:456:0:0:0,-3.91339,-10 0/0:33.8091:6:6:208:0:0:0,-1.80618,-10 0/0:99:51:51:1815:0:0:0,-10,-10 0/0:39.8297:8:8:304:0:0:0,-2.40824,-10 0/0:45.8503:10:10:378:0:0:0,-3.0103,-10 0/0:33.8091:6:6:228:0:0:0,-1.80618,-10 0/0:78.9635:21:21:757:0:0:0,-6.32163,-10 0/0:39.8297:8:8:290:0:0:0,-2.40824,-10 0/0:94.0136:26:26:949:0:0:0,-7.82678,-10 0/0:91.004:25:25:933:0:0:0,-7.52575,-10 0/0:99:49:49:1812:0:0:0,-10,-10 0/0:69.9326:18:18:666:0:0:0,-5.41854,-10 0/0:69.9326:18:18:673:0:0:0,-5.41854,-10 0/0:99:28:28:1028:0:0:0,-8.42884,-10 0/0:60.9018:15:15:509:0:0:0,-4.51545,-10 0/0:51.8709:12:12:425:0:0:0,-3.61236,-10 0/0:91.004:25:25:915:0:0:0,-7.52575,-10 0/0:57.8915:14:14:500:0:0:0,-4.21442,-10 0/0:63.9121:16:16:586:0:0:0,-4.81648,-10 0/0:99:36:36:1333:0:0:0,-10,-10 0/0:84.984:23:23:824:0:0:0,-6.92369,-10 0/0:72.9429:19:19:711:0:0:0,-5.71957,-10 0/0:99:45:45:1665:0:0:0,-10,-10 0/0:27.7885:4:4:152:0:0:0,-1.20412,-10 0/0:63.9121:16:16:606:0:0:0,-4.81648,-10 0/0:48.8606:11:11:361:0:0:0,-3.31133,-10 0/0:21.7679:2:2:74:0:0:0,-0.60206,-7.03 0/0:51.8709:12:12:424:0:0:0,-3.61236,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:77.4578:29:28:1047:1:15:0,-5.76747,-10 0/0:99:32:32:1163:0:0:0,-9.63296,-10 0/0:75.9532:20:20:728:0:0:0,-6.0206,-10 0/0:66.9223:17:17:631:0:0:0,-5.11751,-10 0/0:27.7885:4:4:152:0:0:0,-1.20412,-10 0/0:81.9738:22:22:790:0:0:0,-6.62266,-10 0/0:63.9121:16:16:594:0:0:0,-4.81648,-10 0/1:0.132137:1:1:38:0:0:0,-0.30103,-3.8 0/0:81.9738:22:22:817:0:0:0,-6.62266,-10 0/0:66.9223:17:17:646:0:0:0,-5.11751,-10 0/0:60.9018:15:15:541:0:0:0,-4.51545,-10 scaffold_186 1100367 . G A 172.779 . AB=0.470588;ABP=3.13803;AC=1;AF=0.00549451;AN=182;AO=11;CIGAR=1X;DP=1847;DPB=1847;DPRA=0.768077;EPP=7.94546;EPPR=15.8026;GTI=1;LEN=1;MEANALT=1;MQM=59.3636;MQMR=59.8829;NS=91;NUMALT=1;ODDS=11.07;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=350;QR=67141;RO=1836;RPP=26.8965;RPPR=3963.82;RUN=1;SAF=3;SAP=7.94546;SAR=8;SRF=967;SRP=14.3691;SRR=869;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:18:18:677:0:0:0,-5.41854,-10 0/0:6.76248e-05:8:7:259:1:16:-0.09485,0,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:96.8743:17:17:572:0:0:0,-5.11751,-10 0/0:96.8743:17:17:641:0:0:0,-5.11751,-10 0/0:81.828:12:12:456:0:0:0,-3.61236,-10 0/0:99:54:54:2021:0:0:0,-10,-10 0/0:81.2854:23:22:812:1:16:0,-3.96196,-10 0/0:84.838:13:13:470:0:0:0,-3.91339,-10 0/0:60.7559:5:5:189:0:0:0,-1.50515,-10 0/0:72.7971:9:9:320:0:0:0,-2.70927,-10 0/0:66.7765:7:7:266:0:0:0,-2.10721,-10 0/0:99:34:34:1276:0:0:0,-10,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:99:20:20:743:0:0:0,-6.0206,-10 0/1:99:17:9:320:8:302:-10,0,-10 0/0:66.7765:7:7:259:0:0:0,-2.10721,-10 0/0:99:19:19:690:0:0:0,-5.71957,-10 0/0:99:42:42:1520:0:0:0,-10,-10 0/0:99:18:18:658:0:0:0,-5.41854,-10 0/0:99:23:23:815:0:0:0,-6.92369,-10 0/0:69.7868:8:8:299:0:0:0,-2.40824,-10 0/0:69.7868:8:8:281:0:0:0,-2.40824,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:99:25:25:937:0:0:0,-7.52575,-10 0/0:99:18:18:673:0:0:0,-5.41854,-10 .:.:.:.:.:.:.:. 0/0:99:23:23:823:0:0:0,-6.92369,-10 0/0:99:33:33:1206:0:0:0,-9.93399,-10 0/0:51.725:2:2:69:0:0:0,-0.60206,-6.555 0/0:84.838:13:13:492:0:0:0,-3.91339,-10 0/0:99:25:25:918:0:0:0,-7.52575,-10 0/0:75.8074:10:10:356:0:0:0,-3.0103,-10 0/0:90.8588:15:15:547:0:0:0,-4.51545,-10 0/0:51.725:2:2:76:0:0:0,-0.60206,-7.22 0/0:66.4189:15:14:527:1:16:0,-1.73936,-10 0/0:99:27:27:1000:0:0:0,-8.12781,-10 0/0:93.869:16:16:602:0:0:0,-4.81648,-10 0/0:96.8743:17:17:570:0:0:0,-5.11751,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:99:28:28:1003:0:0:0,-8.42884,-10 0/0:99:27:27:1009:0:0:0,-8.12781,-10 0/0:99:34:34:1246:0:0:0,-10,-10 0/0:99:28:28:1043:0:0:0,-8.42884,-10 0/0:75.8074:10:10:378:0:0:0,-3.0103,-10 0/0:99:43:43:1563:0:0:0,-10,-10 0/0:99:28:28:1011:0:0:0,-8.42884,-10 0/0:99:24:24:897:0:0:0,-7.22472,-10 0/0:99:44:44:1616:0:0:0,-10,-10 0/0:90.8588:15:15:556:0:0:0,-4.51545,-10 0/0:99:40:40:1427:0:0:0,-10,-10 0/0:84.838:13:13:468:0:0:0,-3.91339,-10 0/0:63.7662:6:6:226:0:0:0,-1.80618,-10 0/0:99:51:51:1817:0:0:0,-10,-10 0/0:69.7868:8:8:299:0:0:0,-2.40824,-10 0/0:75.8074:10:10:368:0:0:0,-3.0103,-10 0/0:63.7662:6:6:228:0:0:0,-1.80618,-10 0/0:99:21:21:751:0:0:0,-6.32163,-10 0/0:69.7868:8:8:301:0:0:0,-2.40824,-10 0/0:99:26:26:896:0:0:0,-7.82678,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:99:49:49:1812:0:0:0,-10,-10 0/0:99:18:18:651:0:0:0,-5.41854,-10 0/0:99:18:18:639:0:0:0,-5.41854,-10 0/0:99:28:28:986:0:0:0,-8.42884,-10 0/0:90.8588:15:15:517:0:0:0,-4.51545,-10 0/0:81.828:12:12:408:0:0:0,-3.61236,-10 0/0:99:25:25:939:0:0:0,-7.52575,-10 0/0:87.8486:14:14:518:0:0:0,-4.21442,-10 0/0:93.869:16:16:580:0:0:0,-4.81648,-10 0/0:99:36:36:1356:0:0:0,-10,-10 0/0:99:23:23:844:0:0:0,-6.92369,-10 0/0:99:19:19:711:0:0:0,-5.71957,-10 0/0:99:45:45:1626:0:0:0,-10,-10 0/0:57.7456:4:4:152:0:0:0,-1.20412,-10 0/0:93.869:16:16:599:0:0:0,-4.81648,-10 0/0:78.8176:11:11:365:0:0:0,-3.31133,-10 0/0:51.725:2:2:75:0:0:0,-0.60206,-7.125 0/0:81.828:12:12:428:0:0:0,-3.61236,-10 0/0:99:37:37:1325:0:0:0,-10,-10 0/0:99:29:29:1067:0:0:0,-8.72987,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:99:20:20:754:0:0:0,-6.0206,-10 0/0:96.8743:17:17:641:0:0:0,-5.11751,-10 0/0:57.7456:4:4:151:0:0:0,-1.20412,-10 0/0:99:22:22:810:0:0:0,-6.62266,-10 0/0:93.869:16:16:590:0:0:0,-4.81648,-10 0/0:48.7147:1:1:38:0:0:0,-0.30103,-3.8 0/0:99:22:22:796:0:0:0,-6.62266,-10 0/0:96.8743:17:17:613:0:0:0,-5.11751,-10 0/0:90.8588:15:15:567:0:0:0,-4.51545,-10 scaffold_186 1121176 . A G 150.681 . AB=0.4375;ABP=3.55317;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1X;DP=1609;DPB=1609;DPRA=0.913999;EPP=3.32051;EPPR=3.01573;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9487;NS=92;NUMALT=1;ODDS=13.289;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=265;QR=58428;RO=1600;RPP=18.2106;RPPR=3477.37;RUN=1;SAF=3;SAP=3.32051;SAR=4;SRF=801;SRP=3.01573;SRR=799;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:90.8266:16:16:561:0:0:0,-4.81648,-10 0/0:69.7545:9:9:341:0:0:0,-2.70927,-10 0/0:93.8369:17:17:589:0:0:0,-5.11751,-10 0/0:75.775:11:11:386:0:0:0,-3.31133,-10 0/0:90.8266:16:16:543:0:0:0,-4.81648,-10 0/0:57.7133:5:5:189:0:0:0,-1.50515,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:99:20:20:724:0:0:0,-6.0206,-10 0/0:75.775:11:11:418:0:0:0,-3.31133,-10 0/0:60.7236:6:6:202:0:0:0,-1.80618,-10 0/0:63.7339:7:7:234:0:0:0,-2.10721,-10 0/0:57.7133:5:5:168:0:0:0,-1.50515,-10 0/0:99:20:20:701:0:0:0,-6.0206,-10 0/0:99:27:27:988:0:0:0,-8.12781,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:99:25:24:907:0:0:0,-7.22472,-10 0/0:87.8163:15:15:566:0:0:0,-4.51545,-10 0/0:66.7442:8:8:302:0:0:0,-2.40824,-10 0/0:84.8057:14:14:519:0:0:0,-4.21442,-10 0/0:99:38:38:1390:0:0:0,-10,-10 0/0:96.8472:18:18:681:0:0:0,-5.41854,-10 0/0:99:42:42:1583:0:0:0,-10,-10 0/0:57.7133:5:5:190:0:0:0,-1.50515,-10 0/0:99:23:23:819:0:0:0,-6.92369,-10 0/0:93.8369:17:17:638:0:0:0,-5.11751,-10 0/0:99:23:23:834:0:0:0,-6.92369,-10 0/0:87.8163:15:15:564:0:0:0,-4.51545,-10 0/0:93.8369:17:17:642:0:0:0,-5.11751,-10 0/0:99:22:22:823:0:0:0,-6.62266,-10 0/0:99:31:31:1147:0:0:0,-9.33193,-10 0/0:60.7236:6:6:223:0:0:0,-1.80618,-10 0/0:81.7957:13:13:482:0:0:0,-3.91339,-10 0/0:99:23:23:821:0:0:0,-6.92369,-10 0/0:72.7648:10:10:379:0:0:0,-3.0103,-10 0/0:87.8163:15:15:547:0:0:0,-4.51545,-10 0/0:63.7339:7:7:266:0:0:0,-2.10721,-10 0/0:78.7853:12:12:396:0:0:0,-3.61236,-10 0/0:99:30:30:1136:0:0:0,-9.0309,-10 0/0:96.8472:18:18:646:0:0:0,-5.41854,-10 0/1:99:16:9:341:7:265:-10,0,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:99:21:21:765:0:0:0,-6.32163,-10 0/0:90.8266:16:16:541:0:0:0,-4.81648,-10 0/0:99:26:26:921:0:0:0,-7.82678,-10 0/0:87.8163:15:15:545:0:0:0,-4.51545,-10 0/0:87.8163:16:15:563:0:0:0,-4.51545,-10 0/0:99:35:35:1245:0:0:0,-10,-10 0/0:99:24:24:891:0:0:0,-7.22472,-10 0/0:90.8266:16:16:582:0:0:0,-4.81648,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:84.8057:14:14:479:0:0:0,-4.21442,-10 0/0:99:35:35:1300:0:0:0,-10,-10 0/0:72.7648:10:10:356:0:0:0,-3.0103,-10 0/0:66.7442:8:8:303:0:0:0,-2.40824,-10 0/0:99:30:30:1057:0:0:0,-9.0309,-10 0/0:72.7648:10:10:376:0:0:0,-3.0103,-10 0/0:99:20:20:707:0:0:0,-6.0206,-10 0/0:66.7442:8:8:292:0:0:0,-2.40824,-10 0/0:93.8369:17:17:642:0:0:0,-5.11751,-10 0/0:90.8266:16:16:583:0:0:0,-4.81648,-10 0/0:99:23:23:825:0:0:0,-6.92369,-10 0/0:84.8057:14:14:532:0:0:0,-4.21442,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:99:23:23:846:0:0:0,-6.92369,-10 0/0:99:19:19:709:0:0:0,-5.71957,-10 0/0:99:22:22:814:0:0:0,-6.62266,-10 0/0:78.7853:12:12:417:0:0:0,-3.61236,-10 0/0:87.8163:15:15:541:0:0:0,-4.51545,-10 0/0:96.8472:18:18:595:0:0:0,-5.41854,-10 0/0:72.7648:10:10:375:0:0:0,-3.0103,-10 0/0:99:27:27:1025:0:0:0,-8.12781,-10 0/0:99:23:23:828:0:0:0,-6.92369,-10 0/0:99:20:20:715:0:0:0,-6.0206,-10 0/0:75.775:11:11:388:0:0:0,-3.31133,-10 0/0:99:20:20:737:0:0:0,-6.0206,-10 0/0:72.7648:10:10:362:0:0:0,-3.0103,-10 0/0:84.8057:14:14:531:0:0:0,-4.21442,-10 0/0:84.8057:14:14:519:0:0:0,-4.21442,-10 0/0:60.7236:6:6:226:0:0:0,-1.80618,-10 0/0:81.7957:13:13:483:0:0:0,-3.91339,-10 0/0:84.8057:14:14:505:0:0:0,-4.21442,-10 0/0:99:20:20:725:0:0:0,-6.0206,-10 0/0:99:25:25:914:0:0:0,-7.52575,-10 0/0:78.7853:12:12:430:0:0:0,-3.61236,-10 0/0:99:22:22:809:0:0:0,-6.62266,-10 0/0:60.7236:6:6:219:0:0:0,-1.80618,-10 0/0:96.8472:18:18:658:0:0:0,-5.41854,-10 0/0:84.8057:14:14:499:0:0:0,-4.21442,-10 0/0:63.7339:7:7:266:0:0:0,-2.10721,-10 0/0:87.8163:15:15:569:0:0:0,-4.51545,-10 0/0:87.8163:15:15:561:0:0:0,-4.51545,-10 0/0:84.8057:14:14:522:0:0:0,-4.21442,-10 scaffold_186 1238422 . G A 2541.78 . AB=0.574257;ABP=7.84774;AC=9;AF=0.048913;AN=184;AO=101;CIGAR=1X;DP=1920;DPB=1920;DPRA=1.22969;EPP=3.2038;EPPR=3.0533;GTI=2;LEN=1;MEANALT=1;MQM=59.8515;MQMR=59.945;NS=92;NUMALT=1;ODDS=1.3088;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3639;QR=66812;RO=1818;RPP=222.329;RPPR=3950.75;RUN=1;SAF=49;SAP=3.2038;SAR=52;SRF=912;SRP=3.0533;SRR=906;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.2828:13:13:452:0:0:0,-3.91339,-10 0/0:51.2725:12:12:431:0:0:0,-3.61236,-10 0/0:75.3549:20:20:739:0:0:0,-6.0206,-10 0/1:0.989805:14:0:0:14:508:-10,-4.21442,0 0/0:48.2622:11:11:388:0:0:0,-3.31133,-10 0/0:30.2004:5:5:190:0:0:0,-1.50515,-10 0/0:99:31:31:1172:0:0:0,-9.33193,-10 0/0:57.2931:14:14:486:0:0:0,-4.21442,-10 0/0:69.3343:18:18:635:0:0:0,-5.41854,-10 0/0:39.2313:8:8:278:0:0:0,-2.40824,-10 0/0:33.2107:6:6:203:0:0:0,-1.80618,-10 0/0:30.2004:5:5:188:0:0:0,-1.50515,-10 0/0:87.3957:24:24:817:0:0:0,-7.22472,-10 0/0:99:33:33:1248:0:0:0,-9.93399,-10 0/0:81.3754:22:22:764:0:0:0,-6.62266,-10 0/0:90.4056:25:25:920:0:0:0,-7.52575,-10 0/0:99:44:43:1593:1:16:0,-10,-10 0/0:36.221:7:7:264:0:0:0,-2.10721,-10 0/0:96.424:27:27:1014:0:0:0,-8.12781,-10 0/0:99:40:40:1499:0:0:0,-10,-10 0/0:63.3137:16:16:580:0:0:0,-4.81648,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:39.2313:8:8:303:0:0:0,-2.40824,-10 0/0:66.324:17:17:608:0:0:0,-5.11751,-10 0/0:60.3876:24:23:842:1:16:0,-4.24451,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:69.3343:18:18:679:0:0:0,-5.41854,-10 0/0:66.324:17:17:602:0:0:0,-5.11751,-10 0/0:75.3549:20:20:709:0:0:0,-6.0206,-10 0/0:99:28:28:1038:0:0:0,-8.42884,-10 0/0:27.1901:4:4:152:0:0:0,-1.20412,-10 0/0:48.2622:11:11:406:0:0:0,-3.31133,-10 1/1:35.0052:22:0:0:22:809:-10,-6.62266,0 0/0:39.2313:8:8:300:0:0:0,-2.40824,-10 0/0:90.4056:25:25:868:0:0:0,-7.52575,-10 0/0:33.2107:6:6:217:0:0:0,-1.80618,-10 0/0:87.3957:24:24:868:0:0:0,-7.22472,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:87.3957:24:24:877:0:0:0,-7.22472,-10 0/0:90.4056:25:25:943:0:0:0,-7.52575,-10 0/0:99:30:30:1131:0:0:0,-9.0309,-10 0/0:68.9069:27:26:971:1:16:0,-5.09645,-10 0/0:66.324:17:17:632:0:0:0,-5.11751,-10 0/0:74.6172:29:28:1002:1:16:0,-5.66747,-10 0/0:93.4152:26:26:963:0:0:0,-7.82678,-10 0/0:69.3343:18:18:673:0:0:0,-5.41854,-10 0/0:99:40:40:1502:0:0:0,-10,-10 0/0:66.324:17:17:628:0:0:0,-5.11751,-10 0/0:66.324:17:17:635:0:0:0,-5.11751,-10 0/0:99:47:47:1704:0:0:0,-10,-10 0/0:69.3343:18:18:681:0:0:0,-5.41854,-10 0/0:99:47:47:1698:0:0:0,-10,-10 0/0:66.324:17:17:646:0:0:0,-5.11751,-10 0/0:33.2107:6:6:224:0:0:0,-1.80618,-10 0/0:99:58:58:2127:0:0:0,-10,-10 0/0:66.324:17:17:623:0:0:0,-5.11751,-10 0/0:78.3651:21:21:779:0:0:0,-6.32163,-10 0/0:33.2107:6:6:225:0:0:0,-1.80618,-10 1/1:16.9434:16:0:0:16:589:-10,-4.81648,0 0/1:0.0277483:9:0:0:9:342:-10,-2.70927,0 0/0:96.424:27:27:999:0:0:0,-8.12781,-10 0/0:66.324:17:17:621:0:0:0,-5.11751,-10 0/1:99:58:28:1031:30:1133:-10,0,-10 0/0:78.3651:21:21:796:0:0:0,-6.32163,-10 0/0:75.3549:20:20:728:0:0:0,-6.0206,-10 0/0:94.7482:36:35:1312:1:16:0,-7.68078,-10 0/0:75.3549:20:20:715:0:0:0,-6.0206,-10 0/0:39.2313:8:8:291:0:0:0,-2.40824,-10 0/0:99:42:42:1534:0:0:0,-10,-10 0/0:45.2519:10:10:353:0:0:0,-3.0103,-10 0/0:75.3549:20:20:742:0:0:0,-6.0206,-10 0/0:99:33:33:1174:0:0:0,-9.93399,-10 0/0:96.424:28:27:1014:0:0:0,-8.12781,-10 0/0:93.4152:26:26:974:0:0:0,-7.82678,-10 0/0:99:40:40:1486:0:0:0,-10,-10 0/0:66.324:17:17:635:0:0:0,-5.11751,-10 0/0:33.2107:6:6:201:0:0:0,-1.80618,-10 0/0:48.2622:11:11:396:0:0:0,-3.31133,-10 0/0:24.1798:3:3:114:0:0:0,-0.90309,-10 0/0:45.2519:10:10:380:0:0:0,-3.0103,-10 0/0:99:36:36:1330:0:0:0,-10,-10 0/0:84.3856:23:23:854:0:0:0,-6.92369,-10 0/0:75.3549:20:20:760:0:0:0,-6.0206,-10 0/0:66.324:17:17:643:0:0:0,-5.11751,-10 0/0:99:38:38:1417:0:0:0,-10,-10 0/0:24.1798:3:3:113:0:0:0,-0.90309,-10 0/0:57.2931:14:14:505:0:0:0,-4.21442,-10 0/0:72.3446:19:19:698:0:0:0,-5.71957,-10 0/1:76.2665:7:4:150:3:102:-8.95686,0,-10 0/1:42.4118:13:11:408:2:76:-5.1987,0,-10 0/0:39.2313:8:8:291:0:0:0,-2.40824,-10 0/0:57.2931:14:14:515:0:0:0,-4.21442,-10 scaffold_186 1293578 . A G 1613.7 . AB=0.719298;ABP=26.8203;AC=8;AF=0.0434783;AN=184;AO=78;CIGAR=1X;DP=2078;DPB=2078;DPRA=0.679099;EPP=14.1461;EPPR=52.3431;GTI=2;LEN=1;MEANALT=1.16667;MQM=59.0897;MQMR=58.3821;NS=92;NUMALT=1;ODDS=1.11865;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2398;QR=65746;RO=1997;RPP=139.423;RPPR=3561.4;RUN=1;SAF=49;SAP=14.1461;SAR=29;SRF=1085;SRP=35.5541;SRR=912;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.2131:14:14:433:0:0:0,-4.21442,-10 0/1:0.000802266:7:0:0:7:239:-10,-2.10721,0 0/1:99:23:9:271:14:393:-10,0,-10 1/1:6.61763:18:0:0:18:511:-10,-5.41854,0 0/0:52.1822:11:11:334:0:0:0,-3.31133,-10 0/0:40.141:7:7:223:0:0:0,-2.10721,-10 0/0:99:45:45:1456:0:0:0,-10,-10 0/0:99:39:39:1317:0:0:0,-10,-10 0/0:85.2951:22:22:718:0:0:0,-6.62266,-10 0/0:25.0895:2:2:67:0:0:0,-0.60206,-6.365 0/0:40.141:7:7:230:0:0:0,-2.10721,-10 0/0:52.1822:11:11:377:0:0:0,-3.31133,-10 0/0:99:27:27:892:0:0:0,-8.12781,-10 0/0:99:49:49:1717:0:0:0,-10,-10 0/0:76.2646:19:19:612:0:0:0,-5.71957,-10 0/0:73.2543:18:18:581:0:0:0,-5.41854,-10 0/0:99:31:31:1060:0:0:0,-9.33193,-10 0/0:37.1307:6:6:209:0:0:0,-1.80618,-10 0/0:99:28:28:918:0:0:0,-8.42884,-10 0/0:99:44:44:1421:0:0:0,-10,-10 0/0:73.2543:18:18:616:0:0:0,-5.41854,-10 0/0:99:36:36:1117:0:0:0,-10,-10 0/0:70.244:18:17:575:0:0:0,-5.11751,-10 0/0:99:28:28:930:0:0:0,-8.42884,-10 0/0:91.3158:24:24:807:0:0:0,-7.22472,-10 0/0:94.3231:25:25:833:0:0:0,-7.52575,-10 0/0:85.2951:22:22:734:0:0:0,-6.62266,-10 0/0:70.244:17:17:540:0:0:0,-5.11751,-10 0/0:94.3231:25:25:873:0:0:0,-7.52575,-10 0/0:99:45:44:1447:0:0:0,-10,-10 0/0:46.1616:9:9:275:0:0:0,-2.70927,-10 0/0:76.2646:19:19:667:0:0:0,-5.71957,-10 0/0:99:31:31:976:0:0:0,-9.33193,-10 0/0:55.1925:12:12:392:0:0:0,-3.61236,-10 0/0:58.2028:13:13:425:0:0:0,-3.91339,-10 0/0:31.1101:4:4:138:0:0:0,-1.20412,-10 0/0:49.1719:10:10:359:0:0:0,-3.0103,-10 0/0:99:31:31:1027:0:0:0,-9.33193,-10 0/0:91.3158:24:24:828:0:0:0,-7.22472,-10 0/0:64.2234:15:15:468:0:0:0,-4.51545,-10 0/0:99:33:33:1087:0:0:0,-9.93399,-10 0/0:97.3301:26:26:812:0:0:0,-7.82678,-10 0/0:76.2646:19:19:610:0:0:0,-5.71957,-10 0/0:99:36:36:1178:0:0:0,-10,-10 0/0:85.2951:22:22:700:0:0:0,-6.62266,-10 0/0:46.1616:9:9:309:0:0:0,-2.70927,-10 0/0:99:48:48:1547:0:0:0,-10,-10 0/0:99:27:27:858:0:0:0,-8.12781,-10 0/0:76.2646:19:19:661:0:0:0,-5.71957,-10 0/0:99:44:44:1428:0:0:0,-10,-10 0/0:61.2131:14:14:415:0:0:0,-4.21442,-10 0/0:99:39:39:1363:0:0:0,-10,-10 0/0:67.2337:16:16:539:0:0:0,-4.81648,-10 0/0:40.141:7:7:264:0:0:0,-2.10721,-10 0/0:99:48:48:1531:0:0:0,-10,-10 0/0:67.2337:16:16:555:0:0:0,-4.81648,-10 0/0:94.3231:25:25:836:0:0:0,-7.52575,-10 0/0:40.141:7:7:225:0:0:0,-2.10721,-10 0/0:70.244:17:17:603:0:0:0,-5.11751,-10 0/0:70.244:17:17:558:0:0:0,-5.11751,-10 0/0:99:30:30:1047:0:0:0,-9.0309,-10 0/0:76.2646:19:19:625:0:0:0,-5.71957,-10 0/0:99:48:48:1539:0:0:0,-10,-10 0/0:67.2337:16:16:529:0:0:0,-4.81648,-10 0/0:46.1616:9:9:291:0:0:0,-2.70927,-10 0/0:99:33:33:1084:0:0:0,-9.93399,-10 0/0:79.2748:20:20:628:0:0:0,-6.0206,-10 0/0:64.2234:15:15:518:0:0:0,-4.51545,-10 0/0:99:50:50:1596:0:0:0,-10,-10 0/0:52.1822:11:11:377:0:0:0,-3.31133,-10 0/0:52.1822:11:11:350:0:0:0,-3.31133,-10 0/0:99:27:27:907:0:0:0,-8.12781,-10 0/0:99:34:34:1043:0:0:0,-10,-10 0/0:64.2234:15:15:496:0:0:0,-4.51545,-10 0/0:99:44:44:1420:0:0:0,-10,-10 0/0:73.2543:18:18:634:0:0:0,-5.41854,-10 0/1:0.005099:19:1:16:17:539:-10,-2.71327,0 1/1:9.62793:19:0:0:19:605:-10,-5.71957,0 0/0:40.141:7:7:229:0:0:0,-2.10721,-10 0/0:43.1513:8:8:267:0:0:0,-2.40824,-10 0/0:99:49:49:1649:0:0:0,-10,-10 0/0:99:34:34:1177:0:0:0,-10,-10 0/0:99:27:27:890:0:0:0,-8.12781,-10 0/0:99:27:27:884:0:0:0,-8.12781,-10 0/0:99:32:32:1023:0:0:0,-9.63296,-10 0/0:37.1307:6:6:217:0:0:0,-1.80618,-10 0/0:67.2337:16:16:488:0:0:0,-4.81648,-10 0/0:88.3056:23:23:756:0:0:0,-6.92369,-10 0/1:69.8763:8:5:148:3:111:-9.69995,0,-10 0/0:97.3301:26:26:849:0:0:0,-7.82678,-10 0/0:79.2748:20:20:665:0:0:0,-6.0206,-10 0/0:61.2131:14:14:462:0:0:0,-4.21442,-10 scaffold_186 1341294 . A C 18386 . AB=0.493088;ABP=3.19042;AC=82;AF=0.450549;AN=182;AO=656;CIGAR=1X;DP=1423;DPB=1423;DPRA=1.26588;EPP=20.1702;EPPR=3.02167;GTI=4;LEN=1;MEANALT=1.04;MQM=59.9253;MQMR=59.9974;NS=91;NUMALT=1;ODDS=0.116773;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=23719;QR=28001;RO=764;RPP=1427.5;RPPR=1653.34;RUN=1;SAF=364;SAP=20.1702;SAR=292;SRF=384;SRP=3.05578;SRR=380;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.5626:17:17:595:0:0:0,-5.11751,-10 0/0:25.4802:9:9:317:0:0:0,-2.70927,-10 0/0:22.4699:8:8:304:0:0:0,-2.40824,-10 0/0:31.5008:11:11:392:0:0:0,-3.31133,-10 0/1:99:9:5:189:4:139:-10,0,-10 1/1:34.155:10:0:0:10:348:-10,-3.0103,0 0/0:99:38:38:1363:0:0:0,-10,-10 1/1:55.2271:17:0:0:17:612:-10,-5.11751,0 0/0:31.5008:12:11:376:0:0:0,-3.31133,-10 0/1:1.03773:3:0:0:3:114:-10,-0.90309,0 0/0:22.4699:8:8:303:0:0:0,-2.40824,-10 0/0:19.4596:7:7:259:0:0:0,-2.10721,-10 1/1:88.3398:28:0:0:28:983:-10,-8.42884,0 0/1:99:22:12:439:10:318:-10,0,-10 1/1:52.2168:16:0:0:16:604:-10,-4.81648,0 1/1:61.2477:19:0:0:19:675:-10,-5.71957,0 1/1:61.2477:19:0:0:19:701:-10,-5.71957,0 0/0:19.4596:7:7:253:0:0:0,-2.10721,-10 0/1:99:22:12:451:10:352:-10,0,-10 0/1:99:31:15:568:16:562:-10,0,-10 0/1:99:11:5:190:6:211:-10,0,-10 0/1:99:34:11:411:23:833:-10,0,-10 1/1:34.155:10:0:0:10:353:-10,-3.0103,0 0/0:25.4802:9:9:339:0:0:0,-2.70927,-10 0/0:40.5317:14:14:520:0:0:0,-4.21442,-10 1/1:67.2683:21:0:0:21:743:-10,-6.32163,0 1/1:55.2271:17:0:0:17:594:-10,-5.11751,0 0/0:37.5214:13:13:486:0:0:0,-3.91339,-10 0/0:40.5317:14:14:519:0:0:0,-4.21442,-10 0/1:99:29:16:607:13:462:-10,0,-10 0/1:0.130011:2:2:76:0:0:0,-0.60206,-7.22 1/1:19.1035:5:0:0:5:187:-10,-1.50515,0 .:.:.:.:.:.:.:. 0/0:28.4905:10:10:373:0:0:0,-3.0103,-10 1/1:76.2991:24:0:0:24:884:-10,-7.22472,0 1/1:19.1035:5:0:0:5:190:-10,-1.50515,0 1/1:37.1653:11:0:0:11:402:-10,-3.31133,0 0/1:99:28:15:539:13:467:-10,0,-10 1/1:40.1756:12:0:0:12:383:-10,-3.61236,0 1/1:43.1859:13:0:0:13:466:-10,-3.91339,0 0/1:99:34:14:455:20:717:-10,0,-10 1/1:61.2477:19:0:0:19:718:-10,-5.71957,0 0/0:49.5626:17:17:608:0:0:0,-5.11751,-10 1/1:88.3398:28:0:0:28:1018:-10,-8.42884,0 1/1:58.2374:19:0:0:18:683:-10,-5.41854,0 0/1:99:15:11:401:4:146:-10,0,-10 0/1:99:39:22:808:17:627:-10,0,-10 0/1:99:20:9:341:11:410:-10,0,-10 1/1:31.1447:9:0:0:9:341:-10,-2.70927,0 0/0:76.6553:26:26:964:0:0:0,-7.82678,-10 1/1:40.1756:12:0:0:12:456:-10,-3.61236,0 1/1:85.3298:27:0:0:27:995:-10,-8.12781,0 1/1:31.1447:9:0:0:9:336:-10,-2.70927,0 1/1:16.0932:4:0:0:4:142:-10,-1.20412,0 0/1:99:27:11:414:16:555:-10,0,-10 0/0:22.4699:8:8:300:0:0:0,-2.40824,-10 0/1:99:19:8:303:11:400:-10,0,-10 1/1:43.1859:13:0:0:13:460:-10,-3.91339,0 0/0:25.4802:9:9:342:0:0:0,-2.70927,-10 0/0:22.4699:8:8:304:0:0:0,-2.40824,-10 0/0:91.7071:31:31:1141:0:0:0,-9.33193,-10 1/1:40.1756:12:0:0:12:456:-10,-3.61236,0 0/1:99:22:14:530:8:295:-10,0,-10 0/0:34.5111:12:12:432:0:0:0,-3.61236,-10 0/0:43.542:15:15:569:0:0:0,-4.51545,-10 1/1:58.2374:18:0:0:18:672:-10,-5.41854,0 1/1:46.1962:15:0:0:14:521:-10,-4.21442,0 0/0:19.4596:7:7:264:0:0:0,-2.10721,-10 0/1:99:42:25:925:17:624:-10,0,-10 0/0:16.4493:6:6:205:0:0:0,-1.80618,-10 0/0:46.5523:16:16:546:0:0:0,-4.81648,-10 0/0:61.6038:21:21:718:0:0:0,-6.32163,-10 0/0:49.5626:17:17:604:0:0:0,-5.11751,-10 0/0:43.542:15:15:553:0:0:0,-4.51545,-10 0/0:70.6347:24:24:903:0:0:0,-7.22472,-10 0/1:29.5399:7:6:227:1:23:-1.03789,0,-10 0/0:10.4287:4:4:136:0:0:0,-1.20412,-10 0/0:25.4802:9:9:319:0:0:0,-2.70927,-10 1/1:16.0932:4:0:0:4:152:-10,-1.20412,0 1/1:37.1653:11:0:0:11:407:-10,-3.31133,0 1/1:55.2271:17:0:0:17:632:-10,-5.11751,0 0/0:55.5832:19:19:684:0:0:0,-5.71957,-10 0/0:52.5729:18:18:673:0:0:0,-5.41854,-10 0/1:99:17:9:338:8:245:-10,0,-10 0/0:58.5935:20:20:747:0:0:0,-6.0206,-10 0/1:1.03773:3:0:0:3:105:-9.8,-0.90309,0 0/0:25.4802:9:9:333:0:0:0,-2.70927,-10 0/0:22.4699:8:8:301:0:0:0,-2.40824,-10 0/1:0.130011:2:2:76:0:0:0,-0.60206,-7.22 0/0:46.5523:16:16:601:0:0:0,-4.81648,-10 0/0:61.6038:21:21:775:0:0:0,-6.32163,-10 0/0:22.4699:8:8:292:0:0:0,-2.40824,-10 scaffold_186 1341297 . C G 262.847 . AB=0.647059;ABP=6.20364;AC=1;AF=0.00549451;AN=182;AO=12;CIGAR=1X;DP=1427;DPB=1427;DPRA=1.02079;EPP=5.9056;EPPR=8.36742;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9639;NS=91;NUMALT=1;ODDS=7.47605;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=430;QR=51183;RO=1411;RPP=29.068;RPPR=3015.06;RUN=1;SAF=8;SAP=5.9056;SAR=4;SRF=741;SRP=10.7682;SRR=670;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:77.6328:17:17:600:0:0:0,-5.11751,-10 0/0:53.5505:9:9:311:0:0:0,-2.70927,-10 0/0:50.5402:8:8:302:0:0:0,-2.40824,-10 0/0:59.5711:11:11:360:0:0:0,-3.31133,-10 0/0:53.5505:9:9:306:0:0:0,-2.70927,-10 0/0:56.5608:10:10:369:0:0:0,-3.0103,-10 0/0:99:38:38:1380:0:0:0,-10,-10 0/0:77.6328:17:17:628:0:0:0,-5.11751,-10 0/0:62.5814:12:12:447:0:0:0,-3.61236,-10 0/0:38.499:4:4:152:0:0:0,-1.20412,-10 0/0:50.5402:8:8:297:0:0:0,-2.40824,-10 0/0:47.5299:7:7:246:0:0:0,-2.10721,-10 0/0:99:28:27:936:0:0:0,-8.12781,-10 0/0:92.6841:22:22:791:0:0:0,-6.62266,-10 0/0:74.6226:16:16:576:0:0:0,-4.81648,-10 0/0:83.6534:19:19:677:0:0:0,-5.71957,-10 0/0:83.6534:19:19:685:0:0:0,-5.71957,-10 0/0:47.5299:7:7:242:0:0:0,-2.10721,-10 0/0:92.6841:22:22:789:0:0:0,-6.62266,-10 0/0:99:31:31:1147:0:0:0,-9.33193,-10 0/0:59.5711:11:11:382:0:0:0,-3.31133,-10 0/0:99:34:34:1231:0:0:0,-10,-10 0/0:56.5608:10:10:375:0:0:0,-3.0103,-10 0/0:53.5505:9:9:336:0:0:0,-2.70927,-10 0/0:68.602:14:14:518:0:0:0,-4.21442,-10 0/0:89.6739:21:21:777:0:0:0,-6.32163,-10 0/0:74.6226:17:16:583:0:0:0,-4.81648,-10 0/0:65.5917:13:13:475:0:0:0,-3.91339,-10 0/0:68.602:14:14:525:0:0:0,-4.21442,-10 0/0:99:29:29:1089:0:0:0,-8.72987,-10 0/0:32.4784:2:2:50:0:0:0,-0.60206,-4.75 0/0:41.5093:5:5:168:0:0:0,-1.50515,-10 .:.:.:.:.:.:.:. 0/0:56.5608:10:10:332:0:0:0,-3.0103,-10 0/0:98.7037:24:24:893:0:0:0,-7.22472,-10 0/0:41.5093:5:5:165:0:0:0,-1.50515,-10 0/0:59.5711:11:11:403:0:0:0,-3.31133,-10 0/0:99:28:28:1003:0:0:0,-8.42884,-10 0/0:62.5814:12:12:430:0:0:0,-3.61236,-10 0/0:68.602:14:14:529:0:0:0,-4.21442,-10 0/0:99:34:34:1213:0:0:0,-10,-10 0/0:83.6534:19:19:716:0:0:0,-5.71957,-10 0/0:74.6226:17:16:553:0:0:0,-4.81648,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:86.6637:20:20:747:0:0:0,-6.0206,-10 0/0:71.6123:15:15:537:0:0:0,-4.51545,-10 0/0:99:39:39:1413:0:0:0,-10,-10 0/0:86.6637:20:20:738:0:0:0,-6.0206,-10 0/0:53.5505:9:9:342:0:0:0,-2.70927,-10 0/0:99:26:26:984:0:0:0,-7.82678,-10 0/0:62.5814:12:12:453:0:0:0,-3.61236,-10 0/0:99:27:27:942:0:0:0,-8.12781,-10 0/0:53.5505:9:9:337:0:0:0,-2.70927,-10 0/0:38.499:4:4:127:0:0:0,-1.20412,-10 0/0:99:27:27:927:0:0:0,-8.12781,-10 0/0:50.5402:8:8:288:0:0:0,-2.40824,-10 0/0:83.6534:19:19:680:0:0:0,-5.71957,-10 0/0:65.5917:13:13:430:0:0:0,-3.91339,-10 0/0:53.5505:9:9:337:0:0:0,-2.70927,-10 0/0:50.5402:8:8:299:0:0:0,-2.40824,-10 0/0:99:31:31:1132:0:0:0,-9.33193,-10 0/0:62.5814:12:12:451:0:0:0,-3.61236,-10 0/0:92.6841:22:22:829:0:0:0,-6.62266,-10 0/0:62.5814:12:12:454:0:0:0,-3.61236,-10 0/0:71.6123:15:15:561:0:0:0,-4.51545,-10 0/0:80.6431:18:18:651:0:0:0,-5.41854,-10 0/0:48.2106:15:14:523:1:16:0,-1.73936,-10 0/0:44.5196:7:6:226:0:0:0,-1.80618,-10 0/0:99:43:43:1592:0:0:0,-10,-10 0/0:44.5196:6:6:204:0:0:0,-1.80618,-10 0/0:74.6226:16:16:546:0:0:0,-4.81648,-10 0/0:89.6739:21:21:722:0:0:0,-6.32163,-10 0/1:99:17:6:194:11:414:-10,0,-10 0/0:71.6123:15:15:523:0:0:0,-4.51545,-10 0/0:98.7037:24:24:905:0:0:0,-7.22472,-10 0/0:47.5299:7:7:244:0:0:0,-2.10721,-10 0/0:38.499:4:4:140:0:0:0,-1.20412,-10 0/0:53.5505:9:9:340:0:0:0,-2.70927,-10 0/0:38.499:4:4:152:0:0:0,-1.20412,-10 0/0:59.5711:11:11:409:0:0:0,-3.31133,-10 0/0:77.6328:17:17:629:0:0:0,-5.11751,-10 0/0:83.6534:19:19:716:0:0:0,-5.71957,-10 0/0:80.6431:18:18:675:0:0:0,-5.41854,-10 0/0:77.6328:17:17:628:0:0:0,-5.11751,-10 0/0:86.6637:20:20:739:0:0:0,-6.0206,-10 0/0:35.4887:3:3:98:0:0:0,-0.90309,-9.14667 0/0:53.5505:9:9:308:0:0:0,-2.70927,-10 0/0:50.5402:8:8:293:0:0:0,-2.40824,-10 0/0:32.4784:2:2:75:0:0:0,-0.60206,-7.125 0/0:74.6226:16:16:596:0:0:0,-4.81648,-10 0/0:89.6739:21:21:762:0:0:0,-6.32163,-10 0/0:50.5402:8:8:278:0:0:0,-2.40824,-10 scaffold_186 1458035 . C T 517.818 . AB=0.6;ABP=6.05036;AC=2;AF=0.0108696;AN=184;AO=21;CIGAR=1X;DP=1869;DPB=1869;DPRA=0.858779;EPP=3.1137;EPPR=3.39143;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9507;NS=92;NUMALT=1;ODDS=7.5698;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=775;QR=67012;RO=1846;RPP=48.6112;RPPR=4011.55;RUN=1;SAF=11;SAP=3.1137;SAR=10;SRF=932;SRP=3.39143;SRR=914;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.0043:13:13:487:0:0:0,-3.91339,-10 0/0:59.9734:10:10:347:0:0:0,-3.0103,-10 0/0:84.0556:18:18:606:0:0:0,-5.41854,-10 0/0:75.0249:15:15:556:0:0:0,-4.51545,-10 0/0:59.9734:10:10:364:0:0:0,-3.0103,-10 0/0:69.0043:13:13:484:0:0:0,-3.91339,-10 0/0:99:43:43:1567:0:0:0,-10,-10 0/0:78.0352:16:16:607:0:0:0,-4.81648,-10 0/0:59.9734:11:10:331:0:0:0,-3.0103,-10 0/0:59.9734:10:10:366:0:0:0,-3.0103,-10 0/0:56.9631:9:9:332:0:0:0,-2.70927,-10 0/0:44.9219:5:5:135:0:0:0,-1.50515,-10 0/0:99:31:31:1117:0:0:0,-9.33193,-10 0/0:99:43:43:1584:0:0:0,-10,-10 0/0:99:27:27:972:0:0:0,-8.12781,-10 0/0:87.0661:19:19:697:0:0:0,-5.71957,-10 0/0:99:27:27:984:0:0:0,-8.12781,-10 0/0:56.9631:9:9:327:0:0:0,-2.70927,-10 0/0:93.0869:21:21:760:0:0:0,-6.32163,-10 0/0:99:43:43:1572:0:0:0,-10,-10 0/0:72.0146:14:14:522:0:0:0,-4.21442,-10 0/0:99:36:36:1347:0:0:0,-10,-10 0/0:38.9013:3:3:114:0:0:0,-0.90309,-10 0/0:72.0146:14:14:526:0:0:0,-4.21442,-10 0/0:99:30:30:1078:0:0:0,-9.0309,-10 0/0:99:32:32:1162:0:0:0,-9.63296,-10 0/0:62.9837:11:11:384:0:0:0,-3.31133,-10 0/0:84.0556:18:18:658:0:0:0,-5.41854,-10 0/0:99:31:31:1067:0:0:0,-9.33193,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:35.891:2:2:76:0:0:0,-0.60206,-7.22 0/0:59.9734:10:10:361:0:0:0,-3.0103,-10 0/0:78.0352:17:16:555:0:0:0,-4.81648,-10 0/0:59.9734:10:10:377:0:0:0,-3.0103,-10 0/0:93.0869:21:21:740:0:0:0,-6.32163,-10 0/0:56.9631:9:9:337:0:0:0,-2.70927,-10 0/0:50.9425:7:7:262:0:0:0,-2.10721,-10 0/0:99:30:30:1067:0:0:0,-9.0309,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:81.0455:17:17:617:0:0:0,-5.11751,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:90.0755:20:20:700:0:0:0,-6.0206,-10 0/0:96.0934:22:22:824:0:0:0,-6.62266,-10 0/0:99:40:40:1467:0:0:0,-10,-10 0/0:99:23:23:852:0:0:0,-6.92369,-10 0/0:78.0352:16:16:579:0:0:0,-4.81648,-10 0/0:99:26:26:968:0:0:0,-7.82678,-10 0/0:99:24:24:837:0:0:0,-7.22472,-10 0/0:72.0146:14:14:505:0:0:0,-4.21442,-10 0/0:99:29:29:1053:0:0:0,-8.72987,-10 0/0:56.9631:9:9:333:0:0:0,-2.70927,-10 0/0:99:51:51:1852:0:0:0,-10,-10 0/0:69.0043:13:13:491:0:0:0,-3.91339,-10 0/0:41.9116:4:4:134:0:0:0,-1.20412,-10 0/0:99:46:46:1711:0:0:0,-10,-10 0/0:84.0556:18:18:673:0:0:0,-5.41854,-10 0/0:93.0869:21:21:748:0:0:0,-6.32163,-10 0/1:5.2162e-06:7:0:0:7:243:-10,-2.10721,0 0/0:87.0661:19:19:693:0:0:0,-5.71957,-10 0/0:59.9734:10:10:374:0:0:0,-3.0103,-10 0/0:99:25:25:899:0:0:0,-7.52575,-10 0/0:99:23:23:801:0:0:0,-6.92369,-10 0/0:99:45:45:1652:0:0:0,-10,-10 0/0:65.994:12:12:435:0:0:0,-3.61236,-10 0/0:72.0146:14:14:491:0:0:0,-4.21442,-10 0/0:99:45:45:1627:0:0:0,-10,-10 0/0:99:26:26:914:0:0:0,-7.82678,-10 0/0:56.9631:9:9:335:0:0:0,-2.70927,-10 0/0:99:51:51:1861:0:0:0,-10,-10 0/0:59.9734:10:10:368:0:0:0,-3.0103,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:99:28:28:1017:0:0:0,-8.42884,-10 0/0:99:29:29:1037:0:0:0,-8.72987,-10 0/0:84.0556:18:18:681:0:0:0,-5.41854,-10 0/0:99:36:36:1327:0:0:0,-10,-10 0/0:69.0043:13:13:463:0:0:0,-3.91339,-10 0/0:90.0755:20:20:703:0:0:0,-6.0206,-10 0/0:47.9322:6:6:204:0:0:0,-1.80618,-10 0/0:38.9013:3:3:103:0:0:0,-0.90309,-9.61333 0/0:69.0043:13:13:464:0:0:0,-3.91339,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:99:27:27:1011:0:0:0,-8.12781,-10 0/0:99:29:29:1068:0:0:0,-8.72987,-10 0/1:99:28:14:520:14:532:-10,0,-10 0/0:99:23:23:801:0:0:0,-6.92369,-10 0/0:47.9322:6:6:228:0:0:0,-1.80618,-10 0/0:78.0352:16:16:547:0:0:0,-4.81648,-10 0/0:75.0249:15:15:523:0:0:0,-4.51545,-10 0/0:32.8807:1:1:14:0:0:0,-0.30103,-1.4 0/0:41.9116:4:4:152:0:0:0,-1.20412,-10 0/0:59.9734:10:10:356:0:0:0,-3.0103,-10 0/0:59.9734:10:10:355:0:0:0,-3.0103,-10 scaffold_186 1459481 . C T 559.335 . AB=0.567568;ABP=4.47751;AC=1;AF=0.00543478;AN=184;AO=23;CIGAR=1X;DP=2260;DPB=2260;DPRA=1.33041;EPP=5.3706;EPPR=3.48033;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9396;NS=92;NUMALT=1;ODDS=6.3767;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=835;QR=81354;RO=2236;RPP=52.9542;RPPR=4858.42;RUN=1;SAF=14;SAP=5.3706;SAR=9;SRF=1129;SRP=3.48033;SRR=1107;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.8719:19:19:672:0:0:0,-5.71957,-10 0/0:45.7792:10:10:368:0:0:0,-3.0103,-10 0/0:84.9131:23:23:857:0:0:0,-6.92369,-10 0/0:66.8513:17:17:624:0:0:0,-5.11751,-10 0/0:66.8513:17:17:613:0:0:0,-5.11751,-10 0/0:72.8719:19:19:687:0:0:0,-5.71957,-10 0/0:99:58:58:2115:0:0:0,-10,-10 0/0:96.9546:27:27:1014:0:0:0,-8.12781,-10 0/0:63.841:16:16:598:0:0:0,-4.81648,-10 0/0:30.7277:5:5:168:0:0:0,-1.50515,-10 0/0:33.738:6:6:227:0:0:0,-1.80618,-10 0/0:42.7689:9:9:342:0:0:0,-2.70927,-10 0/0:99:42:42:1527:0:0:0,-10,-10 0/0:99:38:38:1388:0:0:0,-10,-10 0/0:99:40:40:1505:0:0:0,-10,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:84.9131:23:23:851:0:0:0,-6.92369,-10 0/0:57.8204:14:14:497:0:0:0,-4.21442,-10 0/0:99:29:29:982:0:0:0,-8.72987,-10 0/0:99:57:57:2086:0:0:0,-10,-10 0/0:54.8101:13:13:491:0:0:0,-3.91339,-10 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:45.7792:10:10:375:0:0:0,-3.0103,-10 0/0:93.9441:26:26:923:0:0:0,-7.82678,-10 0/0:96.9546:27:27:1022:0:0:0,-8.12781,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/0:72.8719:19:19:692:0:0:0,-5.71957,-10 0/0:75.8822:20:20:742:0:0:0,-6.0206,-10 0/0:84.9131:23:23:776:0:0:0,-6.92369,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:42.7689:9:9:296:0:0:0,-2.70927,-10 0/0:27.7174:4:4:129:0:0:0,-1.20412,-10 0/0:90.9325:25:25:886:0:0:0,-7.52575,-10 0/0:99:29:29:1022:0:0:0,-8.72987,-10 0/0:96.9546:27:27:1009:0:0:0,-8.12781,-10 0/0:42.7689:9:9:332:0:0:0,-2.70927,-10 0/0:42.7689:9:9:285:0:0:0,-2.70927,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:96.9546:27:27:989:0:0:0,-8.12781,-10 0/0:63.841:16:16:575:0:0:0,-4.81648,-10 0/0:99:41:41:1492:0:0:0,-10,-10 0/0:78.8925:21:21:763:0:0:0,-6.32163,-10 0/0:60.8307:15:15:526:0:0:0,-4.51545,-10 0/0:99:38:38:1360:0:0:0,-10,-10 0/0:84.9131:23:23:846:0:0:0,-6.92369,-10 0/0:60.8307:15:15:569:0:0:0,-4.51545,-10 0/0:99:48:48:1736:0:0:0,-10,-10 0/0:99:37:37:1385:0:0:0,-10,-10 0/0:60.8307:15:15:565:0:0:0,-4.51545,-10 0/0:99:41:41:1497:0:0:0,-10,-10 0/0:60.8307:15:15:501:0:0:0,-4.51545,-10 0/0:99:52:52:1857:0:0:0,-10,-10 0/0:69.8616:18:18:631:0:0:0,-5.41854,-10 0/0:45.7792:10:10:378:0:0:0,-3.0103,-10 0/0:99:53:53:1957:0:0:0,-10,-10 0/0:57.8204:14:14:476:0:0:0,-4.21442,-10 0/0:57.8204:14:14:523:0:0:0,-4.21442,-10 0/0:66.8513:17:17:627:0:0:0,-5.11751,-10 0/0:84.9131:23:23:831:0:0:0,-6.92369,-10 0/0:72.8719:19:19:683:0:0:0,-5.71957,-10 0/0:99:38:38:1331:0:0:0,-10,-10 0/0:69.8616:18:18:613:0:0:0,-5.41854,-10 0/0:97.7572:41:40:1497:1:26:0,-8.12945,-10 0/0:96.9546:27:27:947:0:0:0,-8.12781,-10 0/0:45.7792:10:10:376:0:0:0,-3.0103,-10 0/0:99:39:39:1435:0:0:0,-10,-10 0/0:78.8925:21:21:790:0:0:0,-6.32163,-10 0/0:27.7174:4:4:118:0:0:0,-1.20412,-10 0/0:99:55:55:2011:0:0:0,-10,-10 0/0:51.7998:12:12:408:0:0:0,-3.61236,-10 0/0:78.8925:21:21:791:0:0:0,-6.32163,-10 0/0:99:40:40:1449:0:0:0,-10,-10 0/1:99:37:16:593:21:793:-10,0,-10 0/0:87.9228:24:24:855:0:0:0,-7.22472,-10 0/0:99:42:42:1554:0:0:0,-10,-10 0/0:57.8204:14:14:506:0:0:0,-4.21442,-10 0/0:66.8513:17:17:637:0:0:0,-5.11751,-10 0/0:72.8719:19:19:714:0:0:0,-5.71957,-10 0/0:36.7483:7:7:256:0:0:0,-2.10721,-10 0/0:57.8204:14:14:506:0:0:0,-4.21442,-10 0/0:99:45:45:1646:0:0:0,-10,-10 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:99:44:44:1640:0:0:0,-10,-10 0/0:99:31:30:1131:0:0:0,-9.0309,-10 0/0:99:31:31:1103:0:0:0,-9.33193,-10 0/0:36.7483:7:7:259:0:0:0,-2.10721,-10 0/0:96.9546:27:27:1019:0:0:0,-8.12781,-10 0/0:66.8513:17:17:593:0:0:0,-5.11751,-10 0/0:45.7792:10:10:365:0:0:0,-3.0103,-10 0/0:90.9325:25:25:944:0:0:0,-7.52575,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:48.7142:19:18:669:1:16:0,-2.84082,-10 scaffold_186 1459482 . C A 1066.57 . AB=0.452381;ABP=3.83753;AC=3;AF=0.0163043;AN=184;AO=44;CIGAR=1X;DP=2260;DPB=2260;DPRA=1.01831;EPP=4.78696;EPPR=3.44263;GTI=0;LEN=1;MEANALT=1;MQM=59.9773;MQMR=59.9422;NS=92;NUMALT=1;ODDS=4.74518;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1543;QR=81089;RO=2215;RPP=98.5551;RPPR=4812.82;RUN=1;SAF=25;SAP=4.78696;SAR=19;SRF=1118;SRP=3.44263;SRR=1097;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:71.7156:19:19:693:0:0:0,-5.71957,-10 0/0:44.6229:10:10:380:0:0:0,-3.0103,-10 0/0:83.7567:23:23:853:0:0:0,-6.92369,-10 0/0:65.695:17:17:602:0:0:0,-5.11751,-10 0/0:65.695:17:17:621:0:0:0,-5.11751,-10 0/0:71.7156:19:19:686:0:0:0,-5.71957,-10 0/0:99:58:58:2109:0:0:0,-10,-10 0/0:95.7968:27:27:1012:0:0:0,-8.12781,-10 0/0:62.6847:16:16:606:0:0:0,-4.81648,-10 0/0:29.5714:5:5:180:0:0:0,-1.50515,-10 0/0:32.5817:6:6:228:0:0:0,-1.80618,-10 0/0:41.6126:9:9:337:0:0:0,-2.70927,-10 0/0:99:42:42:1541:0:0:0,-10,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/0:99:40:40:1497:0:0:0,-10,-10 0/0:99:29:29:1071:0:0:0,-8.72987,-10 0/0:83.7567:23:23:797:0:0:0,-6.92369,-10 0/0:56.6641:14:14:506:0:0:0,-4.21442,-10 0/0:99:29:29:1044:0:0:0,-8.72987,-10 0/0:99:57:57:2099:0:0:0,-10,-10 0/0:53.6538:13:13:478:0:0:0,-3.91339,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:44.6229:10:10:380:0:0:0,-3.0103,-10 0/0:92.7871:26:26:964:0:0:0,-7.82678,-10 0/0:95.7968:27:27:1017:0:0:0,-8.12781,-10 0/0:99:32:32:1152:0:0:0,-9.63296,-10 0/0:71.7156:19:19:693:0:0:0,-5.71957,-10 0/0:74.7259:20:20:745:0:0:0,-6.0206,-10 0/0:83.7567:23:23:802:0:0:0,-6.92369,-10 0/0:99:34:34:1241:0:0:0,-10,-10 0/0:41.6126:9:9:302:0:0:0,-2.70927,-10 0/0:26.5611:4:4:150:0:0:0,-1.20412,-10 0/0:89.7771:25:25:887:0:0:0,-7.52575,-10 0/0:99:29:29:1047:0:0:0,-8.72987,-10 0/0:95.7968:27:27:1014:0:0:0,-8.12781,-10 0/0:41.6126:9:9:339:0:0:0,-2.70927,-10 0/0:20.7138:9:8:295:1:15:0,-0.255027,-10 0/0:98.8058:28:28:1037:0:0:0,-8.42884,-10 0/0:95.7968:27:27:950:0:0:0,-8.12781,-10 0/0:62.6847:16:16:591:0:0:0,-4.81648,-10 0/0:99:41:41:1433:0:0:0,-10,-10 0/0:77.7362:21:21:789:0:0:0,-6.32163,-10 0/0:59.6744:15:15:554:0:0:0,-4.51545,-10 0/0:99:38:38:1408:0:0:0,-10,-10 0/0:83.7567:23:23:854:0:0:0,-6.92369,-10 0/0:59.6744:15:15:569:0:0:0,-4.51545,-10 0/0:99:48:48:1718:0:0:0,-10,-10 0/0:99:37:37:1385:0:0:0,-10,-10 0/0:59.6744:15:15:569:0:0:0,-4.51545,-10 0/0:99:41:41:1457:0:0:0,-10,-10 0/0:59.6744:15:15:542:0:0:0,-4.51545,-10 0/0:99:52:52:1895:0:0:0,-10,-10 0/0:68.7053:18:18:607:0:0:0,-5.41854,-10 0/0:44.6229:10:10:380:0:0:0,-3.0103,-10 0/0:99:53:53:1926:0:0:0,-10,-10 0/0:56.6641:14:14:519:0:0:0,-4.21442,-10 0/0:56.6641:14:14:496:0:0:0,-4.21442,-10 0/0:65.695:17:17:613:0:0:0,-5.11751,-10 0/0:83.7567:23:23:842:0:0:0,-6.92369,-10 0/0:71.7156:19:19:677:0:0:0,-5.71957,-10 0/0:99:38:38:1382:0:0:0,-10,-10 0/0:68.7053:18:18:624:0:0:0,-5.41854,-10 0/0:99:41:41:1539:0:0:0,-10,-10 0/0:95.7968:27:27:997:0:0:0,-8.12781,-10 0/0:44.6229:10:10:366:0:0:0,-3.0103,-10 0/0:99:39:39:1429:0:0:0,-10,-10 0/0:77.7362:21:21:793:0:0:0,-6.32163,-10 0/0:23.5508:4:3:104:0:0:0,-0.90309,-9.5 0/0:99:55:55:2026:0:0:0,-10,-10 0/0:50.6435:12:12:435:0:0:0,-3.61236,-10 0/0:77.7362:21:21:759:0:0:0,-6.32163,-10 0/0:99:40:40:1462:0:0:0,-10,-10 0/0:99:37:37:1394:0:0:0,-10,-10 1/1:21.9925:24:0:0:24:844:-10,-7.22472,0 0/1:99:42:23:865:19:684:-10,0,-10 0/0:56.6641:14:14:531:0:0:0,-4.21442,-10 0/0:65.695:17:17:637:0:0:0,-5.11751,-10 0/0:71.7156:19:19:714:0:0:0,-5.71957,-10 0/0:35.592:7:7:258:0:0:0,-2.10721,-10 0/0:56.6641:14:14:517:0:0:0,-4.21442,-10 0/0:99:45:45:1658:0:0:0,-10,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:99:44:44:1574:0:0:0,-10,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:99:31:31:1105:0:0:0,-9.33193,-10 0/0:35.592:7:7:265:0:0:0,-2.10721,-10 0/0:95.7968:27:27:990:0:0:0,-8.12781,-10 0/0:65.695:17:17:616:0:0:0,-5.11751,-10 0/0:44.6229:10:10:376:0:0:0,-3.0103,-10 0/0:89.7771:25:25:946:0:0:0,-7.52575,-10 0/0:98.8058:28:28:1036:0:0:0,-8.42884,-10 0/0:71.7156:19:19:682:0:0:0,-5.71957,-10 scaffold_186 1464193 . C T 10665.6 . AB=0.484456;ABP=3.82038;AC=34;AF=0.184783;AN=184;AO=381;CIGAR=1X;DP=2134;DPB=2134;DPRA=1.14913;EPP=3.016;EPPR=3.05492;GTI=1;LEN=1;MEANALT=1;MQM=59.79;MQMR=59.9241;NS=92;NUMALT=1;ODDS=1.39137;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=14014;QR=63123;RO=1752;RPP=830.341;RPPR=3807.43;RUN=1;SAF=191;SAP=3.016;SAR=190;SRF=873;SRP=3.05492;SRR=879;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.1825:17:17:607:0:0:0,-5.11751,-10 0/0:29.0795:7:7:237:0:0:0,-2.10721,-10 0/1:99:30:19:681:11:413:-10,0,-10 0/0:50.1516:14:14:526:0:0:0,-4.21442,-10 0/0:50.1516:14:14:483:0:0:0,-4.21442,-10 1/1:28.1767:17:0:0:17:612:-10,-5.11751,0 0/0:84.7005:35:34:1192:1:16:0,-7.39198,-10 0/0:71.2237:21:21:768:0:0:0,-6.32163,-10 0/1:8.19251:12:11:394:1:38:-1.26682,0,-10 0/0:29.0795:7:7:241:0:0:0,-2.10721,-10 0/0:11.0177:1:1:35:0:0:0,-0.30103,-3.5 0/0:35.1001:9:9:342:0:0:0,-2.70927,-10 0/0:99:42:42:1562:0:0:0,-10,-10 0/0:83.2649:25:25:925:0:0:0,-7.52575,-10 0/0:89.2853:27:27:995:0:0:0,-8.12781,-10 0/0:71.2237:21:21:713:0:0:0,-6.32163,-10 0/0:99:43:43:1545:0:0:0,-10,-10 1/1:13.1252:12:0:0:12:423:-10,-3.61236,0 0/1:99:17:9:315:8:304:-10,0,-10 0/1:99:44:16:584:28:1008:-10,0,-10 1/1:16.1355:13:0:0:13:492:-10,-3.91339,0 0/1:99:43:20:713:23:845:-10,0,-10 0/0:38.1104:10:10:332:0:0:0,-3.0103,-10 0/1:99:21:12:414:9:330:-10,0,-10 0/0:99:31:31:1065:0:0:0,-9.33193,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:74.234:22:22:827:0:0:0,-6.62266,-10 0/0:62.1928:18:18:607:0:0:0,-5.41854,-10 1/1:55.2694:26:0:0:26:942:-10,-7.82678,0 0/1:99:42:22:749:20:733:-10,0,-10 0/0:29.0795:7:7:241:0:0:0,-2.10721,-10 0/0:38.1104:10:10:349:0:0:0,-3.0103,-10 0/0:68.2134:20:20:746:0:0:0,-6.0206,-10 0/0:44.131:12:12:451:0:0:0,-3.61236,-10 0/0:71.2237:21:21:746:0:0:0,-6.32163,-10 0/1:0.123378:5:0:0:5:190:-10,-1.50515,0 0/0:41.1207:11:11:369:0:0:0,-3.31133,-10 0/0:99:31:31:1173:0:0:0,-9.33193,-10 0/0:50.1516:14:14:498:0:0:0,-4.21442,-10 0/0:47.1413:13:13:494:0:0:0,-3.91339,-10 0/1:99:34:18:666:16:570:-10,0,-10 1/1:49.2488:24:0:0:24:874:-10,-7.22472,0 1/1:67.3106:30:0:0:30:1131:-10,-9.0309,0 0/0:99:45:45:1660:0:0:0,-10,-10 0/0:98.3077:30:30:1085:0:0:0,-9.0309,-10 0/0:50.1516:14:14:508:0:0:0,-4.21442,-10 0/0:99:61:61:2235:0:0:0,-10,-10 0/0:80.2546:24:24:819:0:0:0,-7.22472,-10 0/0:53.1619:15:15:557:0:0:0,-4.51545,-10 0/0:99:52:51:1816:1:38:0,-10,-10 0/0:50.1516:14:14:527:0:0:0,-4.21442,-10 0/0:99:43:43:1547:0:0:0,-10,-10 0/0:56.1722:16:16:571:0:0:0,-4.81648,-10 0/0:50.1516:14:14:516:0:0:0,-4.21442,-10 0/0:99:43:43:1555:0:0:0,-10,-10 0/0:86.2751:26:26:951:0:0:0,-7.82678,-10 0/1:99:18:9:329:9:342:-10,0,-10 0/0:47.1413:13:13:485:0:0:0,-3.91339,-10 0/0:65.2031:19:19:680:0:0:0,-5.71957,-10 0/0:62.1928:19:18:635:0:0:0,-5.41854,-10 0/1:99:46:19:705:27:989:-10,0,-10 0/0:86.2751:26:26:962:0:0:0,-7.82678,-10 0/0:99:45:45:1549:0:0:0,-10,-10 0/1:99:29:20:730:9:338:-10,0,-10 0/0:29.0795:7:7:247:0:0:0,-2.10721,-10 0/0:99:37:37:1295:0:0:0,-10,-10 0/0:92.2953:28:28:1009:0:0:0,-8.42884,-10 0/0:50.1516:14:14:496:0:0:0,-4.21442,-10 0/0:99:42:42:1511:0:0:0,-10,-10 1/1:16.1355:13:0:0:13:461:-10,-3.91339,0 0/0:86.2751:26:26:921:0:0:0,-7.82678,-10 0/0:99:39:39:1432:0:0:0,-10,-10 0/0:77.2443:23:23:851:0:0:0,-6.92369,-10 0/0:71.2237:21:21:743:0:0:0,-6.32163,-10 0/0:99:35:35:1277:0:0:0,-10,-10 1/1:28.1767:17:0:0:17:620:-10,-5.11751,0 0/0:59.1825:17:17:619:0:0:0,-5.11751,-10 1/1:25.1664:16:0:0:16:603:-10,-4.81648,0 0/0:38.1104:10:10:337:0:0:0,-3.0103,-10 0/0:77.2443:23:23:845:0:0:0,-6.92369,-10 0/0:99:42:42:1561:0:0:0,-10,-10 0/0:99:40:40:1383:0:0:0,-10,-10 0/1:99:20:14:531:6:228:-10,0,-10 0/0:68.2134:20:20:705:0:0:0,-6.0206,-10 1/1:49.2488:24:0:0:24:905:-10,-7.22472,0 0/0:26.0692:6:6:194:0:0:0,-1.80618,-10 0/0:59.1825:17:17:627:0:0:0,-5.11751,-10 0/0:62.1928:18:18:664:0:0:0,-5.41854,-10 0/0:17.0383:3:3:113:0:0:0,-0.90309,-10 0/0:62.1928:18:18:651:0:0:0,-5.41854,-10 0/1:99:25:10:378:15:569:-10,0,-10 0/0:59.1825:17:17:585:0:0:0,-5.11751,-10 scaffold_186 1524072 . C G 5967.67 . AB=0.533597;ABP=5.49076;AC=20;AF=0.108696;AN=184;AO=222;CIGAR=1X;DP=1937;DPB=1937;DPRA=1.09288;EPP=4.41882;EPPR=7.7272;GTI=3;LEN=1;MEANALT=1.06667;MQM=59.8694;MQMR=59.9568;NS=92;NUMALT=1;ODDS=0.138929;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8027;QR=62911;RO=1713;RPP=485.077;RPPR=3722.74;RUN=1;SAF=105;SAP=4.41882;SAR=117;SRF=826;SRP=7.7272;SRR=887;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.3723:15:15:564:0:0:0,-4.51545,-10 0/0:35.3002:8:8:281:0:0:0,-2.40824,-10 0/0:80.4547:23:23:858:0:0:0,-6.92369,-10 0/0:59.3826:16:16:554:0:0:0,-4.81648,-10 0/0:44.3311:11:11:376:0:0:0,-3.31133,-10 1/1:19:13:0:0:13:477:-10,-3.91339,0 0/0:99:38:38:1355:0:0:0,-10,-10 0/0:99:34:34:1174:0:0:0,-10,-10 0/0:71.4238:20:20:747:0:0:0,-6.0206,-10 0/0:20.2487:3:3:114:0:0:0,-0.90309,-10 0/0:44.3311:11:11:416:0:0:0,-3.31133,-10 0/0:29.2796:6:6:224:0:0:0,-1.80618,-10 0/0:99:35:35:1254:0:0:0,-10,-10 0/0:99:40:40:1471:0:0:0,-10,-10 0/0:92.4951:27:27:1013:0:0:0,-8.12781,-10 0/0:74.4341:21:21:785:0:0:0,-6.32163,-10 0/0:99:32:32:1132:0:0:0,-9.63296,-10 0/0:47.3414:12:12:447:0:0:0,-3.61236,-10 0/0:65.4032:18:18:658:0:0:0,-5.41854,-10 0/0:99:36:36:1318:0:0:0,-10,-10 0/1:99:14:5:145:9:337:-10,0,-10 0/1:99:35:19:707:16:592:-10,0,-10 0/0:44.3311:11:11:408:0:0:0,-3.31133,-10 0/0:83.4649:24:24:899:0:0:0,-7.22472,-10 0/0:65.4032:18:18:671:0:0:0,-5.41854,-10 0/0:99:30:30:1116:0:0:0,-9.0309,-10 0/0:53.362:14:14:519:0:0:0,-4.21442,-10 0/0:53.362:14:14:529:0:0:0,-4.21442,-10 0/0:95.5046:28:28:1034:0:0:0,-8.42884,-10 0/0:77.4444:22:22:833:0:0:0,-6.62266,-10 0/0:35.3002:8:8:288:0:0:0,-2.40824,-10 0/0:41.3208:10:10:348:0:0:0,-3.0103,-10 1/1:37.0618:19:0:0:19:687:-10,-5.71957,0 0/0:41.3208:10:10:377:0:0:0,-3.0103,-10 0/0:77.4444:22:22:820:0:0:0,-6.62266,-10 0/1:1.31381:10:0:0:10:353:-10,-3.0103,0 0/0:50.3517:13:13:484:0:0:0,-3.91339,-10 0/0:99:39:39:1460:0:0:0,-10,-10 0/0:50.3517:14:13:494:0:0:0,-3.91339,-10 0/0:71.4238:20:20:752:0:0:0,-6.0206,-10 0/0:99:36:36:1346:0:0:0,-10,-10 1/1:19:13:0:0:13:448:-10,-3.91339,0 0/0:68.4135:19:19:720:0:0:0,-5.71957,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:68.4135:19:19:671:0:0:0,-5.71957,-10 0/0:59.3826:16:16:594:0:0:0,-4.81648,-10 0/0:99:51:51:1870:0:0:0,-10,-10 0/0:86.4751:25:25:916:0:0:0,-7.52575,-10 0/0:53.362:14:14:530:0:0:0,-4.21442,-10 0/0:99:34:34:1223:0:0:0,-10,-10 0/1:1.31381:10:0:0:10:374:-10,-3.0103,0 0/1:99:37:18:670:18:666:-10,0,-10 0/0:53.362:14:14:525:0:0:0,-4.21442,-10 0/0:38.3105:9:9:330:0:0:0,-2.70927,-10 0/0:99:37:37:1351:0:0:0,-10,-10 0/0:47.3414:12:12:456:0:0:0,-3.61236,-10 0/0:98.5134:29:29:1056:0:0:0,-8.72987,-10 0/0:53.362:14:14:509:0:0:0,-4.21442,-10 0/0:68.4135:19:19:706:0:0:0,-5.71957,-10 0/0:50.3517:13:13:476:0:0:0,-3.91339,-10 0/0:83.4649:24:24:897:0:0:0,-7.22472,-10 0/0:86.4751:25:25:941:0:0:0,-7.52575,-10 0/1:99:46:27:1017:19:669:-10,0,-10 0/0:74.4341:21:21:780:0:0:0,-6.32163,-10 0/0:53.362:14:14:484:0:0:0,-4.21442,-10 0/0:99:40:40:1464:0:0:0,-10,-10 0/0:77.4444:22:22:830:0:0:0,-6.62266,-10 0/0:38.3105:9:9:292:0:0:0,-2.70927,-10 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:53.362:14:14:515:0:0:0,-4.21442,-10 0/0:86.4751:25:25:935:0:0:0,-7.52575,-10 0/0:99:38:38:1372:0:0:0,-10,-10 0/0:74.4341:21:21:784:0:0:0,-6.32163,-10 0/0:62.3929:17:17:605:0:0:0,-5.11751,-10 0/0:86.4751:25:25:884:0:0:0,-7.52575,-10 0/0:44.3311:11:11:398:0:0:0,-3.31133,-10 0/0:80.4547:23:23:856:0:0:0,-6.92369,-10 0/0:59.3826:16:16:575:0:0:0,-4.81648,-10 0/1:0.607411:9:0:0:9:318:-10,-2.70927,0 0/0:35.3002:8:8:304:0:0:0,-2.40824,-10 0/1:99:32:13:461:19:698:-10,0,-10 0/1:99:42:25:896:17:600:-10,0,-10 0/0:86.4751:25:25:914:0:0:0,-7.52575,-10 1/1:46.0927:22:0:0:22:800:-10,-6.62266,0 0/0:74.4341:21:21:785:0:0:0,-6.32163,-10 0/0:20.2487:3:3:114:0:0:0,-0.90309,-10 0/0:77.4444:22:22:834:0:0:0,-6.62266,-10 0/0:59.3826:16:16:608:0:0:0,-4.81648,-10 0/0:35.3002:8:8:301:0:0:0,-2.40824,-10 0/1:99:18:10:380:8:304:-10,0,-10 0/0:56.3723:15:15:539:0:0:0,-4.51545,-10 1/1:40.0721:20:0:0:20:704:-10,-6.0206,0 scaffold_186 1540005 . C T 5391.11 . AB=0.533019;ABP=5.01789;AC=23;AF=0.125;AN=184;AO=201;CIGAR=1X;DP=1444;DPB=1444;DPRA=1.21305;EPP=14.7751;EPPR=6.86934;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9895;NS=92;NUMALT=1;ODDS=0.971684;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7351;QR=45446;RO=1243;RPP=439.476;RPPR=2702.15;RUN=1;SAF=117;SAP=14.7751;SAR=84;SRF=645;SRP=6.86934;SRR=598;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:29.8011:8:8:299:0:0:0,-2.40824,-10 0/0:29.8011:8:8:270:0:0:0,-2.40824,-10 0/0:80.9761:25:25:912:0:0:0,-7.52575,-10 0/1:0.150577:5:0:0:5:190:-10,-1.50515,0 0/0:53.8835:16:16:590:0:0:0,-4.81648,-10 0/0:23.7805:6:6:223:0:0:0,-1.80618,-10 0/1:99:30:14:532:16:593:-10,0,-10 0/0:44.8526:13:13:479:0:0:0,-3.91339,-10 0/0:38.832:11:11:418:0:0:0,-3.31133,-10 0/0:23.7805:6:6:225:0:0:0,-1.80618,-10 1/1:21.987:14:0:0:14:505:-10,-4.21442,0 0/0:23.7805:6:6:228:0:0:0,-1.80618,-10 0/1:99:22:10:351:12:424:-10,0,-10 1/1:46.0694:22:0:0:22:813:-10,-6.62266,0 0/1:99:25:11:395:14:515:-10,0,-10 0/0:83.9863:26:26:925:0:0:0,-7.82678,-10 0/0:71.9453:22:22:824:0:0:0,-6.62266,-10 0/0:29.8011:8:8:301:0:0:0,-2.40824,-10 0/0:38.832:11:11:411:0:0:0,-3.31133,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:56.8938:17:17:611:0:0:0,-5.11751,-10 0/0:71.9453:22:22:803:0:0:0,-6.62266,-10 0/0:29.8011:8:8:304:0:0:0,-2.40824,-10 0/0:53.8835:16:16:598:0:0:0,-4.81648,-10 0/0:59.9041:18:18:678:0:0:0,-5.41854,-10 0/0:56.8938:17:17:627:0:0:0,-5.11751,-10 0/0:38.832:11:11:399:0:0:0,-3.31133,-10 1/1:18.9767:13:0:0:13:466:-10,-3.91339,0 1/1:31.0179:17:0:0:17:628:-10,-5.11751,0 0/0:59.9041:18:18:633:0:0:0,-5.41854,-10 0/0:23.7805:6:6:228:0:0:0,-1.80618,-10 0/0:23.7805:6:6:228:0:0:0,-1.80618,-10 0/0:35.8217:10:10:358:0:0:0,-3.0103,-10 1/1:15.9664:12:0:0:12:421:-10,-3.61236,0 0/0:53.8835:16:16:562:0:0:0,-4.81648,-10 0/0:23.7805:6:6:206:0:0:0,-1.80618,-10 0/0:47.8629:14:14:508:0:0:0,-4.21442,-10 0/0:96.0257:30:30:1072:0:0:0,-9.0309,-10 0/1:0.150577:5:0:0:5:167:-10,-1.50515,0 0/0:47.8629:14:14:508:0:0:0,-4.21442,-10 0/1:99:21:14:485:7:250:-10,0,-10 0/0:38.832:11:11:394:0:0:0,-3.31133,-10 0/0:35.8217:10:10:371:0:0:0,-3.0103,-10 0/0:56.8938:17:17:599:0:0:0,-5.11751,-10 0/0:62.9144:19:19:698:0:0:0,-5.71957,-10 0/1:99:20:9:320:11:416:-10,0,-10 0/1:99:26:11:404:15:557:-10,0,-10 0/0:68.935:21:21:742:0:0:0,-6.32163,-10 0/0:35.8217:10:10:354:0:0:0,-3.0103,-10 0/0:83.9863:26:26:977:0:0:0,-7.82678,-10 0/0:35.8217:10:10:380:0:0:0,-3.0103,-10 0/0:59.9041:18:18:683:0:0:0,-5.41854,-10 0/0:38.832:11:11:417:0:0:0,-3.31133,-10 0/0:11.7393:2:2:76:0:0:0,-0.60206,-7.22 0/1:99:28:16:603:12:448:-10,0,-10 0/0:26.7908:7:7:256:0:0:0,-2.10721,-10 0/0:80.9761:25:25:903:0:0:0,-7.52575,-10 0/0:50.8732:15:15:552:0:0:0,-4.51545,-10 0/0:59.9041:18:18:652:0:0:0,-5.41854,-10 0/0:20.7702:5:5:180:0:0:0,-1.50515,-10 0/0:69.8695:30:29:1079:1:16:0,-5.95378,-10 0/0:38.832:11:11:394:0:0:0,-3.31133,-10 0/0:99:34:34:1282:0:0:0,-10,-10 0/0:68.935:21:21:771:0:0:0,-6.32163,-10 0/0:26.7908:7:7:232:0:0:0,-2.10721,-10 0/0:86.9965:27:27:1016:0:0:0,-8.12781,-10 0/0:56.8938:17:17:636:0:0:0,-5.11751,-10 0/0:26.7908:7:7:258:0:0:0,-2.10721,-10 0/0:99:33:33:1178:0:0:0,-9.93399,-10 0/0:38.832:11:11:404:0:0:0,-3.31133,-10 0/0:35.8217:10:10:360:0:0:0,-3.0103,-10 0/0:59.9041:18:18:643:0:0:0,-5.41854,-10 0/0:53.8835:16:16:599:0:0:0,-4.81648,-10 0/0:44.8526:13:13:489:0:0:0,-3.91339,-10 0/0:90.0066:28:28:986:0:0:0,-8.42884,-10 0/0:68.935:21:21:785:0:0:0,-6.32163,-10 0/0:47.8629:14:14:507:0:0:0,-4.21442,-10 0/0:44.8526:13:13:459:0:0:0,-3.91339,-10 0/0:14.7496:3:3:114:0:0:0,-0.90309,-10 0/0:29.8011:8:8:302:0:0:0,-2.40824,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:44.8526:13:13:494:0:0:0,-3.91339,-10 0/1:99:13:4:152:9:334:-10,0,-10 0/0:68.935:21:21:734:0:0:0,-6.32163,-10 0/0:56.8938:17:17:641:0:0:0,-5.11751,-10 0/0:29.8011:8:8:302:0:0:0,-2.40824,-10 0/0:47.8629:14:14:491:0:0:0,-4.21442,-10 0/0:41.8423:12:12:455:0:0:0,-3.61236,-10 1/1:6.93554:9:0:0:9:342:-10,-2.70927,0 0/0:47.8629:14:14:527:0:0:0,-4.21442,-10 0/1:99:17:10:357:7:266:-10,0,-10 0/0:53.8835:16:16:584:0:0:0,-4.81648,-10 scaffold_186 1540007 . G A 702.899 . AB=0.653061;ABP=12.9813;AC=4;AF=0.0217391;AN=184;AO=34;CIGAR=1X;DP=1444;DPB=1444;DPRA=0.980102;EPP=4.03217;EPPR=12.1477;GTI=4;LEN=1;MEANALT=1;MQM=60;MQMR=59.9908;NS=92;NUMALT=1;ODDS=3.56512;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1202;QR=51256;RO=1409;RPP=76.8404;RPPR=3062.61;RUN=1;SAF=19;SAP=4.03217;SAR=15;SRF=743;SRP=12.1477;SRR=666;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.0137:8:8:280:0:0:0,-2.40824,-10 0/1:0.000491087:8:0:0:8:270:-10,-2.40824,0 0/1:99:25:17:593:8:276:-10,0,-10 0/0:37.9828:5:5:190:0:0:0,-1.50515,-10 0/0:71.096:16:16:594:0:0:0,-4.81648,-10 0/0:40.9931:6:6:226:0:0:0,-1.80618,-10 0/0:99:30:30:1132:0:0:0,-9.0309,-10 0/0:62.0652:13:13:488:0:0:0,-3.91339,-10 0/1:0.00393025:11:0:0:11:418:-10,-3.31133,0 0/0:40.9931:6:6:218:0:0:0,-1.80618,-10 0/0:65.0755:14:14:515:0:0:0,-4.21442,-10 0/0:40.9931:6:6:212:0:0:0,-1.80618,-10 0/0:89.1575:22:22:827:0:0:0,-6.62266,-10 0/0:89.1575:22:22:780:0:0:0,-6.62266,-10 0/0:98.1856:25:25:899:0:0:0,-7.52575,-10 0/0:99:26:26:892:0:0:0,-7.82678,-10 0/0:89.1575:22:22:783:0:0:0,-6.62266,-10 0/0:47.0137:8:8:303:0:0:0,-2.40824,-10 0/0:56.0446:11:11:414:0:0:0,-3.31133,-10 0/0:99:33:33:1188:0:0:0,-9.93399,-10 0/0:74.1063:17:17:605:0:0:0,-5.11751,-10 0/0:89.1575:22:22:782:0:0:0,-6.62266,-10 0/0:47.0137:8:8:303:0:0:0,-2.40824,-10 0/0:71.096:16:16:603:0:0:0,-4.81648,-10 0/0:77.1166:18:18:672:0:0:0,-5.41854,-10 0/0:74.1063:17:17:635:0:0:0,-5.11751,-10 0/0:56.0446:11:11:371:0:0:0,-3.31133,-10 0/0:62.0652:13:13:462:0:0:0,-3.91339,-10 0/0:74.1063:17:17:630:0:0:0,-5.11751,-10 0/0:77.1166:18:18:636:0:0:0,-5.41854,-10 0/0:40.9931:6:6:219:0:0:0,-1.80618,-10 0/0:40.9931:6:6:222:0:0:0,-1.80618,-10 0/0:53.0343:10:10:366:0:0:0,-3.0103,-10 0/0:59.0549:12:12:428:0:0:0,-3.61236,-10 0/0:71.096:16:16:547:0:0:0,-4.81648,-10 0/0:40.9931:6:6:206:0:0:0,-1.80618,-10 0/0:65.0755:14:14:499:0:0:0,-4.21442,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:37.9828:5:5:161:0:0:0,-1.50515,-10 0/0:65.0755:14:14:521:0:0:0,-4.21442,-10 0/0:86.1474:21:21:731:0:0:0,-6.32163,-10 0/0:56.0446:11:11:393:0:0:0,-3.31133,-10 0/0:53.0343:10:10:380:0:0:0,-3.0103,-10 0/0:74.1063:17:17:629:0:0:0,-5.11751,-10 0/0:80.1269:19:19:699:0:0:0,-5.71957,-10 0/0:83.1372:20:20:709:0:0:0,-6.0206,-10 0/0:99:26:26:911:0:0:0,-7.82678,-10 0/0:86.1474:21:21:768:0:0:0,-6.32163,-10 0/0:53.0343:10:10:371:0:0:0,-3.0103,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:53.0343:10:10:377:0:0:0,-3.0103,-10 0/0:77.1166:18:18:682:0:0:0,-5.41854,-10 0/0:56.0446:11:11:417:0:0:0,-3.31133,-10 0/0:28.9519:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:44.0034:7:7:256:0:0:0,-2.10721,-10 0/0:98.1856:25:25:915:0:0:0,-7.52575,-10 0/0:68.0858:15:15:543:0:0:0,-4.51545,-10 0/0:77.1166:18:18:659:0:0:0,-5.41854,-10 0/1:6.13828e-05:5:0:0:5:162:-10,-1.50515,0 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:56.0446:11:11:368:0:0:0,-3.31133,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:86.1474:21:21:792:0:0:0,-6.32163,-10 0/0:44.0034:7:7:231:0:0:0,-2.10721,-10 0/0:99:27:27:959:0:0:0,-8.12781,-10 0/0:74.1063:17:17:616:0:0:0,-5.11751,-10 0/0:44.0034:7:7:255:0:0:0,-2.10721,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:56.0446:11:11:401:0:0:0,-3.31133,-10 0/0:53.0343:10:10:368:0:0:0,-3.0103,-10 0/0:77.1166:18:18:639:0:0:0,-5.41854,-10 0/0:71.096:16:16:589:0:0:0,-4.81648,-10 0/0:62.0652:13:13:492:0:0:0,-3.91339,-10 0/0:0.120678:28:26:955:2:76:-1.36865,0,-10 0/0:86.1474:21:21:780:0:0:0,-6.32163,-10 0/0:65.0755:14:14:514:0:0:0,-4.21442,-10 0/0:62.0652:13:13:471:0:0:0,-3.91339,-10 0/0:31.9622:3:3:114:0:0:0,-0.90309,-10 0/0:47.0137:8:8:304:0:0:0,-2.40824,-10 0/0:99:35:35:1247:0:0:0,-10,-10 0/0:62.0652:13:13:494:0:0:0,-3.91339,-10 0/0:62.0652:13:13:464:0:0:0,-3.91339,-10 0/0:86.1474:21:21:750:0:0:0,-6.32163,-10 0/0:74.1063:17:17:646:0:0:0,-5.11751,-10 0/0:47.0137:8:8:278:0:0:0,-2.40824,-10 0/0:62.0652:14:13:472:0:0:0,-3.91339,-10 0/0:59.0549:12:12:427:0:0:0,-3.61236,-10 0/0:50.024:9:9:334:0:0:0,-2.70927,-10 0/0:65.0755:14:14:527:0:0:0,-4.21442,-10 0/0:74.1063:17:17:632:0:0:0,-5.11751,-10 0/0:71.096:16:16:585:0:0:0,-4.81648,-10 scaffold_186 1540073 . C T 37936.6 . AB=0.429487;ABP=9.74743;AC=168;AF=0.913043;AN=184;AO=1295;CIGAR=1X;DP=1446;DPB=1446;DPRA=1.10766;EPP=6.71438;EPPR=3.06899;GTI=0;LEN=1;MEANALT=1.03409;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.329606;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=46862;QR=5351;RO=148;RPP=2815.07;RPPR=324.388;RUN=1;SAF=671;SAP=6.71438;SAR=624;SRF=73;SRP=3.06899;SRR=75;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:26.8634:8:0:0:8:269:-10,-2.40824,0 1/1:26.8634:8:0:0:8:269:-10,-2.40824,0 1/1:78.0385:25:0:0:25:940:-10,-7.52575,0 1/1:17.8325:5:0:0:5:189:-10,-1.50515,0 1/1:50.9458:16:0:0:16:585:-10,-4.81648,0 1/1:20.8428:6:0:0:6:206:-10,-1.80618,0 1/1:93.0886:30:0:0:30:1066:-10,-9.0309,0 0/1:99:14:7:256:7:226:-10,0,-10 1/1:35.8943:11:0:0:11:418:-10,-3.31133,0 1/1:20.8428:6:0:0:6:218:-10,-1.80618,0 1/1:44.9252:14:0:0:14:526:-10,-4.21442,0 1/1:20.8428:6:0:0:6:228:-10,-1.80618,0 0/1:99:22:10:349:12:399:-10,0,-10 1/1:72.0179:23:0:0:23:839:-10,-6.92369,0 1/1:81.0487:26:0:0:26:927:-10,-7.82678,0 1/1:81.0487:26:0:0:26:908:-10,-7.82678,0 1/1:69.0076:22:0:0:22:820:-10,-6.62266,0 1/1:26.8634:8:0:0:8:297:-10,-2.40824,0 1/1:35.8943:11:0:0:11:408:-10,-3.31133,0 1/1:99:33:0:0:33:1190:-10,-9.93399,0 1/1:53.9561:17:0:0:17:612:-10,-5.11751,0 1/1:72.0179:23:0:0:23:764:-10,-6.92369,0 1/1:26.8634:8:0:0:8:304:-10,-2.40824,0 1/1:47.9355:15:0:0:15:570:-10,-4.51545,0 1/1:56.9664:18:0:0:18:662:-10,-5.41854,0 1/1:53.9561:17:0:0:17:619:-10,-5.11751,0 1/1:38.9046:12:0:0:12:429:-10,-3.61236,0 1/1:41.9149:13:0:0:13:487:-10,-3.91339,0 1/1:50.9458:16:0:0:16:583:-10,-4.81648,0 1/1:53.9561:18:0:0:17:591:-10,-5.11751,0 1/1:20.8428:6:0:0:6:219:-10,-1.80618,0 1/1:20.8428:6:0:0:6:228:-10,-1.80618,0 1/1:35.8943:11:0:0:11:410:-10,-3.31133,0 1/1:38.9046:12:0:0:12:433:-10,-3.61236,0 0/0:26.419:16:16:589:0:0:0,-4.81648,-10 1/1:20.8428:6:0:0:6:228:-10,-1.80618,0 0/0:17.3881:13:13:470:0:0:0,-3.91339,-10 0/1:99:31:19:669:12:432:-10,0,-10 1/1:20.8428:6:0:0:6:228:-10,-1.80618,0 1/1:44.9252:14:0:0:14:491:-10,-4.21442,0 1/1:65.9973:21:0:0:21:744:-10,-6.32163,0 1/1:32.884:10:0:0:10:374:-10,-3.0103,0 1/1:32.884:10:0:0:10:376:-10,-3.0103,0 1/1:53.9561:17:0:0:17:594:-10,-5.11751,0 1/1:59.9767:19:0:0:19:665:-10,-5.71957,0 1/1:62.987:20:0:0:20:703:-10,-6.0206,0 1/1:84.0589:27:0:0:27:952:-10,-8.12781,0 1/1:69.0076:22:0:0:22:809:-10,-6.62266,0 1/1:32.884:10:0:0:10:378:-10,-3.0103,0 1/1:32.3955:26:1:38:25:935:-10,-2.61181,0 1/1:32.884:10:0:0:10:380:-10,-3.0103,0 1/1:59.9767:19:0:0:19:693:-10,-5.71957,0 1/1:35.8943:11:0:0:11:418:-10,-3.31133,0 1/1:5.79132:1:0:0:1:38:-3.8,-0.30103,0 1/1:81.0487:26:0:0:26:901:-10,-7.82678,0 1/1:26.8634:8:0:0:8:304:-10,-2.40824,0 1/1:81.0487:26:0:0:26:926:-10,-7.82678,0 0/0:23.4087:15:15:566:0:0:0,-4.51545,-10 1/1:53.9561:17:0:0:17:617:-10,-5.11751,0 1/1:17.8325:5:0:0:5:177:-10,-1.50515,0 1/1:90.079:29:0:0:29:1033:-10,-8.72987,0 1/1:29.8737:10:0:0:9:318:-10,-2.70927,0 1/1:99:33:0:0:33:1216:-10,-9.93399,0 1/1:65.9973:21:0:0:21:790:-10,-6.32163,0 1/1:20.8428:6:0:0:6:227:-10,-1.80618,0 1/1:84.0589:27:0:0:27:1020:-10,-8.12781,0 0/1:99:18:10:365:8:282:-10,0,-10 1/1:23.8531:7:0:0:7:257:-10,-2.10721,0 1/1:99:33:0:0:33:1206:-10,-9.93399,0 1/1:35.8943:11:0:0:11:374:-10,-3.31133,0 1/1:32.884:10:0:0:10:351:-10,-3.0103,0 0/1:99:18:9:324:9:315:-10,0,-10 1/1:47.9355:15:0:0:15:565:-10,-4.51545,0 0/0:17.3881:13:13:484:0:0:0,-3.91339,-10 0/1:38.2825:28:26:909:2:76:-1.36865,0,-10 1/1:65.9973:21:0:0:21:750:-10,-6.32163,0 1/1:44.9252:14:0:0:14:505:-10,-4.21442,0 1/1:38.9046:12:0:0:12:422:-10,-3.61236,0 1/1:11.8119:3:0:0:3:114:-10,-0.90309,0 1/1:26.8634:8:0:0:8:304:-10,-2.40824,0 1/1:99:34:0:0:34:1185:-10,-10,0 0/1:99:12:7:257:5:190:-10,0,-10 0/1:8.92222:13:1:37:12:433:-10,0,-0.900553 1/1:21.0798:22:1:38:21:740:-10,-1.48024,0 1/1:53.9561:18:0:0:17:598:-10,-5.11751,0 1/1:26.8634:8:0:0:8:299:-10,-2.40824,0 1/1:47.9355:15:0:0:15:565:-10,-4.51545,0 1/1:38.9046:12:0:0:12:453:-10,-3.61236,0 1/1:29.8737:9:0:0:9:332:-10,-2.70927,0 1/1:47.9355:15:0:0:15:563:-10,-4.51545,0 1/1:53.9561:17:0:0:17:624:-10,-5.11751,0 1/1:50.9458:16:0:0:16:553:-10,-4.81648,0 scaffold_186 1563535 . G A 749.17 . AB=0.638298;ABP=10.8184;AC=2;AF=0.0108696;AN=184;AO=30;CIGAR=1X;DP=1894;DPB=1894;DPRA=1.1451;EPP=5.61607;EPPR=5.47799;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9737;NS=92;NUMALT=1;ODDS=3.83168;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1110;QR=67806;RO=1862;RPP=68.1545;RPPR=3942.73;RUN=1;SAF=12;SAP=5.61607;SAR=18;SRF=966;SRP=8.7247;SRR=896;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:77.7753:21:21:749:0:0:0,-6.32163,-10 0/0:32.6209:6:6:177:0:0:0,-1.80618,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:62.7239:16:16:578:0:0:0,-4.81648,-10 0/0:29.6106:5:5:185:0:0:0,-1.50515,-10 0/0:56.7033:14:14:532:0:0:0,-4.21442,-10 0/0:99:37:37:1391:0:0:0,-10,-10 0/0:95.8372:27:27:992:0:0:0,-8.12781,-10 0/0:56.7033:14:14:525:0:0:0,-4.21442,-10 0/0:26.6003:4:4:149:0:0:0,-1.20412,-10 0/0:38.6415:8:8:296:0:0:0,-2.40824,-10 0/0:41.6518:9:9:306:0:0:0,-2.70927,-10 0/1:99:31:17:619:14:528:-10,0,-10 0/0:98.84:28:28:1014:0:0:0,-8.42884,-10 0/0:62.7239:16:16:607:0:0:0,-4.81648,-10 0/0:83.7958:23:23:803:0:0:0,-6.92369,-10 0/0:89.8166:25:25:915:0:0:0,-7.52575,-10 0/0:53.693:13:13:466:0:0:0,-3.91339,-10 0/0:62.7239:16:16:581:0:0:0,-4.81648,-10 0/0:99:37:37:1376:0:0:0,-10,-10 0/0:80.7856:22:22:763:0:0:0,-6.62266,-10 0/0:86.8063:24:24:894:0:0:0,-7.22472,-10 0/0:32.6209:6:6:228:0:0:0,-1.80618,-10 0/0:56.7033:14:14:517:0:0:0,-4.21442,-10 0/0:77.7753:21:21:791:0:0:0,-6.32163,-10 0/0:99:32:32:1194:0:0:0,-9.63296,-10 0/0:71.7548:19:19:656:0:0:0,-5.71957,-10 0/0:47.6724:11:11:372:0:0:0,-3.31133,-10 0/0:89.8166:26:25:929:0:0:0,-7.52575,-10 0/0:99:41:41:1475:0:0:0,-10,-10 0/0:47.6724:11:11:413:0:0:0,-3.31133,-10 0/0:26.6003:4:4:148:0:0:0,-1.20412,-10 0/0:92.8269:27:26:919:0:0:0,-7.82678,-10 0/0:38.6415:8:8:290:0:0:0,-2.40824,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:38.6415:8:8:281:0:0:0,-2.40824,-10 0/0:44.6621:10:10:365:0:0:0,-3.0103,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:86.8063:24:24:869:0:0:0,-7.22472,-10 0/0:83.7958:23:23:831:0:0:0,-6.92369,-10 0/0:99:31:31:1159:0:0:0,-9.33193,-10 0/0:62.7239:16:16:601:0:0:0,-4.81648,-10 0/0:77.7753:21:21:777:0:0:0,-6.32163,-10 0/0:77.7753:21:21:750:0:0:0,-6.32163,-10 0/0:86.8063:24:24:897:0:0:0,-7.22472,-10 0/0:53.693:13:13:489:0:0:0,-3.91339,-10 0/0:99:47:47:1754:0:0:0,-10,-10 0/0:83.7958:23:23:849:0:0:0,-6.92369,-10 0/0:47.6724:11:11:397:0:0:0,-3.31133,-10 0/0:99:39:39:1371:0:0:0,-10,-10 0/0:65.7342:17:17:585:0:0:0,-5.11751,-10 0/0:99:44:44:1508:0:0:0,-10,-10 0/0:77.7753:21:21:773:0:0:0,-6.32163,-10 0/0:47.6724:11:11:418:0:0:0,-3.31133,-10 0/0:99:49:49:1788:0:0:0,-10,-10 0/0:77.7753:21:21:793:0:0:0,-6.32163,-10 0/0:89.8166:25:25:899:0:0:0,-7.52575,-10 0/0:35.6312:7:7:246:0:0:0,-2.10721,-10 0/1:0.0916916:16:0:0:16:582:-10,-4.81648,0 0/0:29.6106:5:5:190:0:0:0,-1.50515,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:50.6827:12:12:431:0:0:0,-3.61236,-10 0/0:99:37:37:1303:0:0:0,-10,-10 0/0:77.7753:21:21:759:0:0:0,-6.32163,-10 0/0:83.7958:23:23:849:0:0:0,-6.92369,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:80.7856:22:22:832:0:0:0,-6.62266,-10 0/0:50.6827:12:12:454:0:0:0,-3.61236,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:50.6827:12:12:449:0:0:0,-3.61236,-10 0/0:74.7651:20:20:710:0:0:0,-6.0206,-10 0/0:89.8166:25:25:887:0:0:0,-7.52575,-10 0/0:80.7856:22:22:782:0:0:0,-6.62266,-10 0/0:62.7239:16:16:603:0:0:0,-4.81648,-10 0/0:99:36:36:1253:0:0:0,-10,-10 0/0:65.7342:17:17:622:0:0:0,-5.11751,-10 0/0:59.7136:15:15:527:0:0:0,-4.51545,-10 0/0:56.7033:14:14:515:0:0:0,-4.21442,-10 0/0:44.6621:10:10:373:0:0:0,-3.0103,-10 0/0:50.6827:12:12:418:0:0:0,-3.61236,-10 0/0:99:44:44:1620:0:0:0,-10,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:98.84:28:28:1027:0:0:0,-8.42884,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:23.59:3:3:114:0:0:0,-0.90309,-10 0/0:62.7239:16:16:606:0:0:0,-4.81648,-10 0/0:59.7136:15:15:551:0:0:0,-4.51545,-10 0/0:26.6003:4:4:152:0:0:0,-1.20412,-10 0/0:53.693:13:13:471:0:0:0,-3.91339,-10 0/0:56.7033:14:14:509:0:0:0,-4.21442,-10 0/0:59.7136:15:15:546:0:0:0,-4.51545,-10 scaffold_186 1563565 . G A 330.384 . AB=0.56;ABP=3.79203;AC=1;AF=0.00543478;AN=184;AO=21;CIGAR=1X;DP=1920;DPB=1920;DPRA=1.06627;EPP=5.59539;EPPR=13.1194;GTI=0;LEN=1;MEANALT=1;MQM=59.0476;MQMR=59.9847;NS=92;NUMALT=1;ODDS=7.7774;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=609;QR=67815;RO=1898;RPP=48.6112;RPPR=3809.35;RUN=1;SAF=8;SAP=5.59539;SAR=13;SRF=959;SRP=3.46793;SRR=939;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.2977:23:22:751:1:16:0,-3.96196,-10 0/0:52.7678:8:8:251:0:0:0,-2.40824,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/0:76.8502:16:16:585:0:0:0,-4.81648,-10 0/0:43.7369:5:5:190:0:0:0,-1.50515,-10 0/0:70.8296:14:14:527:0:0:0,-4.21442,-10 0/0:99:35:35:1248:0:0:0,-10,-10 0/0:86.3525:29:28:1055:1:16:0,-5.66747,-10 0/0:73.8399:15:15:534:0:0:0,-4.51545,-10 0/0:40.7266:4:4:116:0:0:0,-1.20412,-10 0/0:58.7884:10:10:352:0:0:0,-3.0103,-10 0/0:55.7781:9:9:314:0:0:0,-2.70927,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:99:28:28:996:0:0:0,-8.42884,-10 0/0:82.8706:18:18:661:0:0:0,-5.41854,-10 0/0:99:24:24:851:0:0:0,-7.22472,-10 0/0:99:24:24:887:0:0:0,-7.22472,-10 0/0:76.8502:16:16:533:0:0:0,-4.81648,-10 0/0:73.8399:15:15:541:0:0:0,-4.51545,-10 0/0:99:37:37:1342:0:0:0,-10,-10 0/0:94.9095:22:22:755:0:0:0,-6.62266,-10 0/0:99:25:25:924:0:0:0,-7.52575,-10 0/0:46.7472:6:6:228:0:0:0,-1.80618,-10 0/0:70.8296:14:14:451:0:0:0,-4.21442,-10 0/0:91.9005:21:21:782:0:0:0,-6.32163,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:58.0862:19:18:646:1:16:0,-2.84082,-10 0/0:33.7811:10:9:298:1:16:0,-0.4103,-10 0/0:99:26:26:957:0:0:0,-7.82678,-10 0/0:99:40:40:1422:0:0:0,-10,-10 0/0:61.7987:11:11:413:0:0:0,-3.31133,-10 0/0:40.7266:4:4:127:0:0:0,-1.20412,-10 0/0:99:28:28:935:0:0:0,-8.42884,-10 0/0:52.7678:8:8:301:0:0:0,-2.40824,-10 0/0:99:33:33:1145:0:0:0,-9.93399,-10 0/0:52.7678:8:8:288:0:0:0,-2.40824,-10 0/0:58.7884:10:10:376:0:0:0,-3.0103,-10 0/0:99:32:32:1127:0:0:0,-9.63296,-10 0/0:99:24:24:817:0:0:0,-7.22472,-10 0/0:97.9173:23:23:817:0:0:0,-6.92369,-10 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:76.8502:16:16:580:0:0:0,-4.81648,-10 0/0:91.9005:21:21:768:0:0:0,-6.32163,-10 0/0:88.8908:20:20:730:0:0:0,-6.0206,-10 0/0:99:24:24:835:0:0:0,-7.22472,-10 0/0:70.8296:14:14:497:0:0:0,-4.21442,-10 0/0:99:49:49:1755:0:0:0,-10,-10 0/0:97.9173:23:23:841:0:0:0,-6.92369,-10 0/0:61.7987:11:11:387:0:0:0,-3.31133,-10 0/0:99:39:39:1326:0:0:0,-10,-10 0/0:79.8604:17:17:610:0:0:0,-5.11751,-10 0/0:99:43:43:1487:0:0:0,-10,-10 0/0:88.8908:20:20:715:0:0:0,-6.0206,-10 0/0:61.7987:11:11:413:0:0:0,-3.31133,-10 0/0:99:49:49:1755:0:0:0,-10,-10 0/0:91.9005:21:21:782:0:0:0,-6.32163,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:52.7678:8:8:264:0:0:0,-2.40824,-10 0/0:76.8502:16:16:600:0:0:0,-4.81648,-10 0/0:43.7369:5:5:186:0:0:0,-1.50515,-10 0/0:83.4947:28:27:996:1:16:0,-5.38168,-10 0/0:67.8193:13:13:469:0:0:0,-3.91339,-10 0/0:99:37:37:1332:0:0:0,-10,-10 0/0:91.9005:21:21:713:0:0:0,-6.32163,-10 0/0:97.9173:23:23:843:0:0:0,-6.92369,-10 0/0:92.0841:31:30:1067:1:16:0,-6.24057,-10 0/0:97.9173:23:23:817:0:0:0,-6.92369,-10 0/0:64.809:12:12:453:0:0:0,-3.61236,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:39.0099:12:11:408:1:16:0,-0.933179,-10 0/0:88.8908:20:20:712:0:0:0,-6.0206,-10 0/1:99:25:11:381:14:497:-10,0,-10 0/0:94.9095:22:22:770:0:0:0,-6.62266,-10 0/0:76.8502:16:16:589:0:0:0,-4.81648,-10 0/0:99:36:36:1317:0:0:0,-10,-10 0/0:79.8604:17:17:635:0:0:0,-5.11751,-10 0/0:76.8502:16:16:563:0:0:0,-4.81648,-10 0/0:70.8296:14:14:493:0:0:0,-4.21442,-10 0/0:58.7884:10:10:359:0:0:0,-3.0103,-10 0/0:61.7987:12:11:365:0:0:0,-3.31133,-10 0/0:99:46:46:1656:0:0:0,-10,-10 0/0:99:29:29:962:0:0:0,-8.72987,-10 0/0:99:29:29:1035:0:0:0,-8.72987,-10 0/0:99:33:33:1148:0:0:0,-9.93399,-10 0/0:99:29:29:1011:0:0:0,-8.72987,-10 0/0:43.7369:5:5:164:0:0:0,-1.50515,-10 0/0:73.8399:15:15:570:0:0:0,-4.51545,-10 0/0:73.8399:15:15:540:0:0:0,-4.51545,-10 0/0:40.7266:4:4:152:0:0:0,-1.20412,-10 0/0:70.8296:14:14:484:0:0:0,-4.21442,-10 0/0:73.8399:15:15:531:0:0:0,-4.51545,-10 0/0:73.8399:15:15:547:0:0:0,-4.51545,-10 scaffold_186 1563616 . G A 704.895 . AB=0.630435;ABP=9.80795;AC=2;AF=0.0108696;AN=184;AO=35;CIGAR=1X;DP=1973;DPB=1973;DPRA=0.977285;EPP=3.56868;EPPR=22.2486;GTI=1;LEN=1;MEANALT=1.125;MQM=59.6;MQMR=59.888;NS=92;NUMALT=1;ODDS=3.95723;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1202;QR=70744;RO=1937;RPP=79.0118;RPPR=4114.15;RUN=1;SAF=19;SAP=3.56868;SAR=16;SRF=902;SRP=22.8405;SRR=1035;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.2838:13:13:461:0:0:0,-3.91339,-10 0/0:36.2117:6:6:228:0:0:0,-1.80618,-10 0/0:72.3353:18:18:681:0:0:0,-5.41854,-10 0/0:69.325:17:17:621:0:0:0,-5.11751,-10 0/0:20.4824:9:8:303:1:16:0,-0.155027,-10 0/0:39.222:7:7:244:0:0:0,-2.10721,-10 0/0:84.21:32:31:1160:1:16:0,-6.52781,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:87.3864:23:23:853:0:0:0,-6.92369,-10 0/0:33.2014:5:5:190:0:0:0,-1.50515,-10 0/0:48.2529:10:10:374:0:0:0,-3.0103,-10 0/0:36.2117:6:6:225:0:0:0,-1.80618,-10 0/0:99:38:38:1369:0:0:0,-10,-10 0/0:99:35:35:1212:0:0:0,-10,-10 0/0:99:42:42:1490:0:0:0,-10,-10 0/0:96.415:26:26:916:0:0:0,-7.82678,-10 0/0:99:30:30:1118:0:0:0,-9.0309,-10 0/0:72.3353:18:18:662:0:0:0,-5.41854,-10 0/0:87.3864:23:23:862:0:0:0,-6.92369,-10 0/0:99:44:44:1596:0:0:0,-10,-10 0/0:66.3147:16:16:589:0:0:0,-4.81648,-10 0/0:99:41:41:1520:0:0:0,-10,-10 0/0:57.2838:13:13:465:0:0:0,-3.91339,-10 0/0:72.3353:18:18:671:0:0:0,-5.41854,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:99:34:34:1223:0:0:0,-10,-10 0/0:63.3044:15:15:552:0:0:0,-4.51545,-10 0/0:54.2735:12:12:424:0:0:0,-3.61236,-10 0/0:66.3147:16:16:592:0:0:0,-4.81648,-10 0/0:99:36:36:1351:0:0:0,-10,-10 0/0:39.222:7:7:251:0:0:0,-2.10721,-10 0/0:54.2735:12:12:443:0:0:0,-3.61236,-10 0/0:87.3864:23:23:786:0:0:0,-6.92369,-10 0/0:54.2735:12:12:427:0:0:0,-3.61236,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:39.222:7:7:263:0:0:0,-2.10721,-10 0/0:54.2735:12:12:430:0:0:0,-3.61236,-10 0/0:90.3964:24:24:856:0:0:0,-7.22472,-10 0/0:69.325:17:17:636:0:0:0,-5.11751,-10 0/0:66.3147:16:16:585:0:0:0,-4.81648,-10 0/0:99:34:34:1242:0:0:0,-10,-10 0/0:87.3864:23:23:835:0:0:0,-6.92369,-10 0/0:60.2941:14:14:532:0:0:0,-4.21442,-10 0/0:99:30:30:1057:0:0:0,-9.0309,-10 0/0:99:30:30:1130:0:0:0,-9.0309,-10 0/0:69.325:17:17:637:0:0:0,-5.11751,-10 0/0:99:68:68:2523:0:0:0,-10,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:66.3147:16:16:599:0:0:0,-4.81648,-10 0/0:99:49:49:1814:0:0:0,-10,-10 0/0:41.8027:17:16:578:1:16:0,-2.28706,-10 0/0:99:45:45:1587:0:0:0,-10,-10 0/0:42.2323:8:8:280:0:0:0,-2.40824,-10 0/0:45.2426:9:9:320:0:0:0,-2.70927,-10 0/0:99:40:40:1474:0:0:0,-10,-10 0/0:54.2735:12:12:431:0:0:0,-3.61236,-10 0/0:81.3661:21:21:782:0:0:0,-6.32163,-10 0/0:48.2529:10:10:348:0:0:0,-3.0103,-10 0/0:36.2117:6:6:228:0:0:0,-1.80618,-10 0/0:45.2426:9:9:340:0:0:0,-2.70927,-10 0/0:99:36:36:1340:0:0:0,-10,-10 0/0:61.3772:24:23:818:1:16:0,-4.24451,-10 0/0:99:47:47:1713:0:0:0,-10,-10 0/0:57.2838:13:13:472:0:0:0,-3.91339,-10 0/0:93.4082:25:25:944:0:0:0,-7.52575,-10 0/0:90.3964:24:24:911:0:0:0,-7.22472,-10 0/0:69.325:17:17:620:0:0:0,-5.11751,-10 0/0:48.2529:10:10:336:0:0:0,-3.0103,-10 0/0:99:31:31:1100:0:0:0,-9.33193,-10 0/0:51.2632:11:11:391:0:0:0,-3.31133,-10 0/0:81.3661:21:21:783:0:0:0,-6.32163,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:40.5432:23:22:799:1:38:0,-1.76196,-10 0/1:0.0801132:18:0:0:17:628:-10,-5.11751,0 0/1:99:28:16:602:12:434:-10,0,-10 0/0:19.8027:17:16:595:1:38:0,-0.087061,-10 0/0:42.2323:8:8:296:0:0:0,-2.40824,-10 0/0:60.2941:14:14:532:0:0:0,-4.21442,-10 0/0:24.1705:2:2:52:0:0:0,-0.60206,-4.94 0/0:66.3147:16:16:536:0:0:0,-4.81648,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:93.4082:25:25:918:0:0:0,-7.52575,-10 0/0:99:35:35:1272:0:0:0,-10,-10 0/0:99:30:30:1089:0:0:0,-9.0309,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:39.222:7:7:254:0:0:0,-2.10721,-10 0/0:84.3763:22:22:802:0:0:0,-6.62266,-10 0/0:54.2735:12:12:451:0:0:0,-3.61236,-10 0/0:36.2117:6:6:228:0:0:0,-1.80618,-10 0/0:60.2941:14:14:507:0:0:0,-4.21442,-10 0/0:72.3353:18:18:679:0:0:0,-5.41854,-10 0/0:51.2632:11:11:369:0:0:0,-3.31133,-10 scaffold_186 1563654 . G T 902.751 . AB=0.486842;ABP=3.12459;AC=5;AF=0.0271739;AN=184;AO=37;CIGAR=1X;DP=1837;DPB=1837;DPRA=0.750937;EPP=3.5385;EPPR=4.32477;GTI=2;LEN=1;MEANALT=1.2;MQM=59.8378;MQMR=59.9311;NS=92;NUMALT=1;ODDS=8.34786;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1383;QR=66032;RO=1799;RPP=83.3548;RPPR=3814.53;RUN=1;SAF=17;SAP=3.5385;SAR=20;SRF=882;SRP=4.48893;SRR=917;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.3821:13:13:483:0:0:0,-3.91339,-10 0/0:51.31:6:6:223:0:0:0,-1.80618,-10 0/0:99:25:25:928:0:0:0,-7.52575,-10 0/0:66.3615:11:11:387:0:0:0,-3.31133,-10 0/0:72.3821:13:13:453:0:0:0,-3.91339,-10 0/0:39.2688:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:40:40:1504:0:0:0,-10,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:84.4233:17:17:595:0:0:0,-5.11751,-10 0/0:39.2688:2:2:73:0:0:0,-0.60206,-6.935 0/0:39.2688:2:2:66:0:0:0,-0.60206,-6.27 0/0:54.3203:7:7:266:0:0:0,-2.10721,-10 0/1:99:18:12:399:6:226:-10,0,-10 0/0:99:39:39:1455:0:0:0,-10,-10 0/1:99:23:13:476:9:341:-10,0,-10 0/0:66.3615:11:11:376:0:0:0,-3.31133,-10 0/1:99:20:13:476:7:263:-10,0,-10 0/1:3.8747e-05:7:0:0:7:249:-10,-2.10721,0 0/0:99:31:31:1119:0:0:0,-9.33193,-10 0/0:99:38:38:1426:0:0:0,-10,-10 0/0:75.3924:14:14:496:0:0:0,-4.21442,-10 0/0:99:28:28:1023:0:0:0,-8.42884,-10 0/0:39.2688:2:2:72:0:0:0,-0.60206,-6.84 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:99:29:29:1059:0:0:0,-8.72987,-10 0/0:90.4438:19:19:722:0:0:0,-5.71957,-10 0/1:7.74943e-05:8:0:0:8:304:-10,-2.40824,0 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:99:36:36:1316:0:0:0,-10,-10 0/0:36.2585:1:1:26:0:0:0,-0.30103,-2.6 0/0:69.3718:12:12:433:0:0:0,-3.61236,-10 0/0:99:23:23:838:0:0:0,-6.92369,-10 0/0:63.3512:10:10:354:0:0:0,-3.0103,-10 0/0:84.4233:17:17:624:0:0:0,-5.11751,-10 0/0:45.2894:4:4:151:0:0:0,-1.20412,-10 0/0:78.4027:15:15:564:0:0:0,-4.51545,-10 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:81.413:16:16:587:0:0:0,-4.81648,-10 0/0:66.3615:11:11:409:0:0:0,-3.31133,-10 0/0:99:28:28:1019:0:0:0,-8.42884,-10 0/0:99:29:29:1003:0:0:0,-8.72987,-10 0/0:99:22:22:813:0:0:0,-6.62266,-10 0/0:99:37:37:1382:0:0:0,-10,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:78.4027:15:15:533:0:0:0,-4.51545,-10 0/0:99:39:39:1460:0:0:0,-10,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:66.3615:11:11:394:0:0:0,-3.31133,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:69.3718:12:12:441:0:0:0,-3.61236,-10 0/0:99:43:43:1602:0:0:0,-10,-10 0/0:72.3821:13:13:465:0:0:0,-3.91339,-10 0/0:54.3203:7:7:265:0:0:0,-2.10721,-10 0/0:99:50:50:1836:0:0:0,-10,-10 0/0:78.4027:15:15:563:0:0:0,-4.51545,-10 0/0:99:29:29:1095:0:0:0,-8.72987,-10 0/0:42.2791:3:3:109:0:0:0,-0.90309,-10 0/0:96.464:21:21:779:0:0:0,-6.32163,-10 0/0:81.413:16:16:578:0:0:0,-4.81648,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:96.464:21:21:784:0:0:0,-6.32163,-10 0/0:99:46:46:1647:0:0:0,-10,-10 0/0:93.4518:20:20:671:0:0:0,-6.0206,-10 0/0:99:22:22:819:0:0:0,-6.62266,-10 0/0:99:38:38:1354:0:0:0,-10,-10 0/0:78.4027:15:15:526:0:0:0,-4.51545,-10 0/0:78.4027:15:15:528:0:0:0,-4.51545,-10 0/0:99:47:47:1736:0:0:0,-10,-10 0/0:39.2688:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:27:27:967:0:0:0,-8.12781,-10 0/0:99:30:30:1124:0:0:0,-9.0309,-10 0/0:96.464:21:21:779:0:0:0,-6.32163,-10 0/0:93.4518:20:20:741:0:0:0,-6.0206,-10 0/0:99:25:25:949:0:0:0,-7.52575,-10 0/0:75.3924:14:14:532:0:0:0,-4.21442,-10 0/0:66.3615:11:11:395:0:0:0,-3.31133,-10 0/0:69.3718:12:12:422:0:0:0,-3.61236,-10 0/0:60.3409:9:9:336:0:0:0,-2.70927,-10 0/0:63.3512:10:10:376:0:0:0,-3.0103,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:99:40:40:1473:0:0:0,-10,-10 0/0:99:29:29:1071:0:0:0,-8.72987,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:87.4336:18:18:672:0:0:0,-5.41854,-10 0/0:60.3409:9:9:336:0:0:0,-2.70927,-10 0/0:54.3203:7:7:253:0:0:0,-2.10721,-10 0/0:78.4027:15:15:569:0:0:0,-4.51545,-10 0/0:51.31:6:6:203:0:0:0,-1.80618,-10 0/0:99:22:22:809:0:0:0,-6.62266,-10 0/0:75.3924:14:14:524:0:0:0,-4.21442,-10 0/0:81.413:16:16:591:0:0:0,-4.81648,-10 scaffold_197 101800 . T C 3606.73 . AB=0.534759;ABP=4.97275;AC=9;AF=0.048913;AN=184;AO=135;CIGAR=1X;DP=2433;DPB=2433;DPRA=1.34574;EPP=11.5193;EPPR=3.25242;GTI=0;LEN=1;MEANALT=1.1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.977212;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4903;QR=84435;RO=2296;RPP=296.159;RPPR=4988.71;RUN=1;SAF=56;SAP=11.5193;SAR=79;SRF=1156;SRP=3.25242;SRR=1140;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.9202:14:14:527:0:0:0,-4.21442,-10 0/0:40.879:10:10:361:0:0:0,-3.0103,-10 0/0:99:31:31:1158:0:0:0,-9.33193,-10 0/0:64.9614:18:18:627:0:0:0,-5.41854,-10 0/0:61.9511:17:17:620:0:0:0,-5.11751,-10 0/0:46.8996:12:12:446:0:0:0,-3.61236,-10 0/0:99:31:31:1116:0:0:0,-9.33193,-10 0/0:99:45:45:1671:0:0:0,-10,-10 0/0:83.023:24:24:884:0:0:0,-7.22472,-10 0/0:43.8893:11:11:394:0:0:0,-3.31133,-10 0/0:49.9099:13:13:488:0:0:0,-3.91339,-10 0/0:49.9099:13:13:457:0:0:0,-3.91339,-10 0/0:99:50:48:1768:1:14:0,-10,-10 0/0:99:40:40:1465:0:0:0,-10,-10 0/0:99:46:46:1688:0:0:0,-10,-10 0/0:99:36:36:1321:0:0:0,-10,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:52.9202:14:14:510:0:0:0,-4.21442,-10 0/0:89.0432:26:26:977:0:0:0,-7.82678,-10 0/1:99:48:21:783:27:956:-10,0,-10 0/1:99:35:13:494:22:815:-10,0,-10 0/0:99:45:45:1632:0:0:0,-10,-10 1/1:5.67109:10:0:0:10:380:-10,-3.0103,0 0/0:89.0432:26:26:965:0:0:0,-7.82678,-10 0/0:83.023:24:24:909:0:0:0,-7.22472,-10 0/0:99:36:36:1294:0:0:0,-10,-10 0/0:58.9408:16:16:604:0:0:0,-4.81648,-10 0/0:52.9202:14:14:495:0:0:0,-4.21442,-10 0/0:99:33:33:1241:0:0:0,-9.93399,-10 0/0:99:44:44:1603:0:0:0,-10,-10 0/0:40.879:10:10:358:0:0:0,-3.0103,-10 0/0:46.8996:12:12:438:0:0:0,-3.61236,-10 0/0:52.9202:14:14:526:0:0:0,-4.21442,-10 0/0:83.023:24:24:898:0:0:0,-7.22472,-10 0/0:83.023:24:24:889:0:0:0,-7.22472,-10 0/0:40.879:10:10:362:0:0:0,-3.0103,-10 0/0:64.9614:18:18:666:0:0:0,-5.41854,-10 0/0:99:36:36:1348:0:0:0,-10,-10 0/0:80.0128:23:23:825:0:0:0,-6.92369,-10 0/1:99:23:12:453:11:406:-10,0,-10 0/1:99:36:20:755:16:565:-10,0,-10 0/0:73.9922:21:21:760:0:0:0,-6.32163,-10 0/0:98.07:29:29:1088:0:0:0,-8.72987,-10 0/0:99:35:35:1229:0:0:0,-10,-10 0/0:86.0332:25:25:948:0:0:0,-7.52575,-10 0/0:77.0026:22:22:828:0:0:0,-6.62266,-10 0/0:99:58:58:2102:0:0:0,-10,-10 0/1:99:45:21:781:24:902:-10,0,-10 0/0:43.8893:11:11:413:0:0:0,-3.31133,-10 0/0:99:56:56:2070:0:0:0,-10,-10 0/0:77.0026:22:22:798:0:0:0,-6.62266,-10 0/0:99:43:42:1536:1:27:0,-8.61082,-10 0/0:46.8996:12:12:442:0:0:0,-3.61236,-10 0/0:34.8584:8:8:282:0:0:0,-2.40824,-10 0/0:99:46:46:1689:0:0:0,-10,-10 1/1:41.7947:22:0:0:22:800:-10,-6.62266,0 0/0:64.9614:18:18:672:0:0:0,-5.41854,-10 0/0:40.879:10:10:364:0:0:0,-3.0103,-10 0/0:58.9408:16:16:608:0:0:0,-4.81648,-10 0/0:43.8893:11:11:409:0:0:0,-3.31133,-10 0/0:99:41:41:1516:0:0:0,-10,-10 0/0:98.07:29:29:1083:0:0:0,-8.72987,-10 0/0:99:51:51:1882:0:0:0,-10,-10 0/0:86.0332:25:25:890:0:0:0,-7.52575,-10 0/0:61.9511:17:17:632:0:0:0,-5.11751,-10 0/0:99:43:43:1604:0:0:0,-10,-10 0/0:70.982:20:20:695:0:0:0,-6.0206,-10 0/0:70.982:20:20:736:0:0:0,-6.0206,-10 0/0:99:40:40:1437:0:0:0,-10,-10 0/0:70.982:20:20:691:0:0:0,-6.0206,-10 0/0:89.0432:26:26:955:0:0:0,-7.82678,-10 0/0:99:35:35:1257:0:0:0,-10,-10 0/0:99:37:37:1387:0:0:0,-10,-10 0/0:77.0026:22:22:788:0:0:0,-6.62266,-10 0/0:99:51:51:1870:0:0:0,-10,-10 0/0:70.982:20:20:707:0:0:0,-6.0206,-10 0/0:67.9717:19:19:699:0:0:0,-5.71957,-10 0/0:77.0026:22:22:795:0:0:0,-6.62266,-10 0/0:34.8584:8:8:288:0:0:0,-2.40824,-10 0/0:58.9408:16:16:598:0:0:0,-4.81648,-10 0/0:99:48:48:1737:0:0:0,-10,-10 0/0:99:50:50:1852:0:0:0,-10,-10 0/0:99:32:32:1216:0:0:0,-9.63296,-10 0/0:55.4977:31:30:1103:1:38:0,-4.04057,-10 0/0:86.0332:25:25:925:0:0:0,-7.52575,-10 0/0:25.8275:5:5:186:0:0:0,-1.50515,-10 0/0:80.0128:23:23:867:0:0:0,-6.92369,-10 0/0:73.9922:21:21:796:0:0:0,-6.32163,-10 0/0:22.8172:4:4:138:0:0:0,-1.20412,-10 0/0:89.0432:27:26:984:0:0:0,-7.82678,-10 0/0:80.0128:23:23:860:0:0:0,-6.92369,-10 0/0:92.0529:27:27:1009:0:0:0,-8.12781,-10 scaffold_197 147009 . A G 181.149 . AB=0.444444;ABP=3.49285;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1412;DPB=1412;DPRA=1.17504;EPP=4.09604;EPPR=5.01474;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.7607;NS=92;NUMALT=1;ODDS=9.4424;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=51905;RO=1404;RPP=20.3821;RPPR=3034.41;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=682;SRP=5.48491;SRR=722;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:86.1632:17:17:643:0:0:0,-5.11751,-10 0/0:53.0499:6:6:228:0:0:0,-1.80618,-10 0/0:83.1529:16:16:602:0:0:0,-4.81648,-10 0/0:59.0705:8:8:298:0:0:0,-2.40824,-10 0/0:86.1632:17:17:631:0:0:0,-5.11751,-10 0/0:71.1117:12:12:448:0:0:0,-3.61236,-10 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:95.1938:20:20:736:0:0:0,-6.0206,-10 0/0:71.1117:12:12:456:0:0:0,-3.61236,-10 0/0:41.0087:2:2:76:0:0:0,-0.60206,-7.22 0/0:53.0499:6:6:226:0:0:0,-1.80618,-10 0/0:59.0705:8:8:300:0:0:0,-2.40824,-10 0/0:95.1938:20:20:711:0:0:0,-6.0206,-10 0/0:99:37:37:1319:0:0:0,-10,-10 0/0:99:23:23:834:0:0:0,-6.92369,-10 0/0:95.1938:20:20:745:0:0:0,-6.0206,-10 0/0:99:27:27:1016:0:0:0,-8.12781,-10 0/0:56.0602:7:7:264:0:0:0,-2.10721,-10 0/0:80.1426:15:15:561:0:0:0,-4.51545,-10 0/0:99:30:30:1120:0:0:0,-9.0309,-10 0/0:68.1014:11:11:398:0:0:0,-3.31133,-10 0/0:99:24:24:903:0:0:0,-7.22472,-10 0/0:47.0293:4:4:152:0:0:0,-1.20412,-10 0/0:89.1734:18:18:681:0:0:0,-5.41854,-10 0/0:65.0911:10:10:376:0:0:0,-3.0103,-10 0/0:99:22:22:817:0:0:0,-6.62266,-10 0/0:86.1632:17:17:645:0:0:0,-5.11751,-10 0/0:80.1426:15:15:559:0:0:0,-4.51545,-10 0/0:80.1426:15:15:563:0:0:0,-4.51545,-10 0/0:99:22:22:820:0:0:0,-6.62266,-10 0/0:59.0705:8:8:282:0:0:0,-2.40824,-10 0/0:53.0499:6:6:215:0:0:0,-1.80618,-10 0/0:68.1014:11:11:416:0:0:0,-3.31133,-10 0/0:62.0808:9:9:340:0:0:0,-2.70927,-10 0/0:98.2039:21:21:782:0:0:0,-6.32163,-10 0/0:53.0499:6:6:228:0:0:0,-1.80618,-10 0/0:62.0808:9:9:328:0:0:0,-2.70927,-10 0/0:83.1529:16:16:584:0:0:0,-4.81648,-10 0/0:68.1014:11:11:395:0:0:0,-3.31133,-10 0/0:68.1014:11:11:402:0:0:0,-3.31133,-10 0/0:95.1938:20:20:751:0:0:0,-6.0206,-10 0/0:74.122:13:13:481:0:0:0,-3.91339,-10 0/0:99:22:22:814:0:0:0,-6.62266,-10 0/0:80.1426:15:15:558:0:0:0,-4.51545,-10 0/1:99:18:10:318:8:304:-10,0,-10 0/0:71.1117:12:12:455:0:0:0,-3.61236,-10 0/0:99:34:34:1280:0:0:0,-10,-10 0/0:86.1632:17:17:634:0:0:0,-5.11751,-10 0/0:62.0808:9:9:342:0:0:0,-2.70927,-10 0/0:99:26:26:975:0:0:0,-7.82678,-10 0/0:80.1426:15:15:538:0:0:0,-4.51545,-10 0/0:99:23:23:867:0:0:0,-6.92369,-10 0/0:59.0705:8:8:301:0:0:0,-2.40824,-10 0/0:53.0499:6:6:221:0:0:0,-1.80618,-10 0/0:99:35:35:1282:0:0:0,-10,-10 0/0:59.0705:8:8:303:0:0:0,-2.40824,-10 0/0:71.1117:12:12:441:0:0:0,-3.61236,-10 0/0:77.1323:14:14:491:0:0:0,-4.21442,-10 0/0:65.0911:10:10:378:0:0:0,-3.0103,-10 0/0:56.0602:7:7:256:0:0:0,-2.10721,-10 0/0:99:24:24:868:0:0:0,-7.22472,-10 0/0:71.1117:12:12:431:0:0:0,-3.61236,-10 0/0:80.1426:15:15:558:0:0:0,-4.51545,-10 0/0:86.1632:17:17:591:0:0:0,-5.11751,-10 0/0:44.019:3:3:112:0:0:0,-0.90309,-10 0/0:89.1734:18:18:675:0:0:0,-5.41854,-10 0/0:77.1323:14:14:531:0:0:0,-4.21442,-10 0/0:65.0911:10:10:374:0:0:0,-3.0103,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:50.0396:5:5:190:0:0:0,-1.50515,-10 0/0:95.1938:20:20:739:0:0:0,-6.0206,-10 0/0:99:23:23:852:0:0:0,-6.92369,-10 0/0:99:26:26:940:0:0:0,-7.82678,-10 0/0:83.1529:16:16:605:0:0:0,-4.81648,-10 0/0:98.2039:21:21:758:0:0:0,-6.32163,-10 0/0:77.1323:14:14:532:0:0:0,-4.21442,-10 0/0:83.1529:16:16:607:0:0:0,-4.81648,-10 0/0:59.0705:8:8:303:0:0:0,-2.40824,-10 0/0:50.0396:5:5:180:0:0:0,-1.50515,-10 0/0:71.1117:12:12:453:0:0:0,-3.61236,-10 0/0:99:23:23:870:0:0:0,-6.92369,-10 0/0:98.2039:21:21:779:0:0:0,-6.32163,-10 0/0:62.0808:9:9:341:0:0:0,-2.70927,-10 0/0:92.1837:19:19:696:0:0:0,-5.71957,-10 0/0:77.1323:14:14:517:0:0:0,-4.21442,-10 0/0:77.1323:14:14:477:0:0:0,-4.21442,-10 0/0:89.1734:18:18:643:0:0:0,-5.41854,-10 0/0:68.1014:11:11:416:0:0:0,-3.31133,-10 0/0:62.0808:9:9:341:0:0:0,-2.70927,-10 0/0:77.1323:14:14:532:0:0:0,-4.21442,-10 0/0:92.1837:19:19:684:0:0:0,-5.71957,-10 0/0:77.1323:14:14:499:0:0:0,-4.21442,-10 scaffold_197 709273 . C T 5589.9 . AB=0.577381;ABP=11.7479;AC=14;AF=0.0769231;AN=182;AO=212;CIGAR=1X;DP=2559;DPB=2559;DPRA=1.15185;EPP=5.63246;EPPR=3.58856;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.6792;NS=91;NUMALT=1;ODDS=0.586434;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7603;QR=86177;RO=2347;RPP=463.362;RPPR=5090.77;RUN=1;SAF=114;SAP=5.63246;SAR=98;SRF=1160;SRP=3.68478;SRR=1187;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.8959:19:19:702:0:0:0,-5.71957,-10 0/0:53.8547:15:15:542:0:0:0,-4.51545,-10 0/0:92.9861:28:28:1037:0:0:0,-8.42884,-10 0/0:62.8855:18:18:659:0:0:0,-5.41854,-10 0/0:65.8959:19:19:662:0:0:0,-5.71957,-10 0/0:56.865:16:16:602:0:0:0,-4.81648,-10 0/0:99:50:50:1804:0:0:0,-10,-10 0/0:99:43:43:1611:0:0:0,-10,-10 0/0:68.9061:20:20:759:0:0:0,-6.0206,-10 0/0:29.7723:7:7:266:0:0:0,-2.10721,-10 0/0:13.0951:17:16:597:1:38:0,-0.087061,-10 0/0:20.7414:4:4:152:0:0:0,-1.20412,-10 0/0:99:42:42:1507:0:0:0,-10,-10 0/0:99:51:51:1851:0:0:0,-10,-10 0/0:99:31:31:1108:0:0:0,-9.33193,-10 0/0:99:37:37:1359:0:0:0,-10,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:50.8444:14:14:516:0:0:0,-4.21442,-10 0/0:80.9472:24:24:898:0:0:0,-7.22472,-10 0/1:99:54:26:934:28:979:-10,0,-10 0/1:99:24:8:265:16:573:-10,0,-10 0/0:99:45:45:1650:0:0:0,-10,-10 0/1:1.59959:13:0:0:13:491:-10,-3.91339,0 0/1:99:20:9:340:11:400:-10,0,-10 0/0:99:42:42:1518:0:0:0,-10,-10 1/1:47.4326:45:1:38:44:1531:-10,-8.09314,0 0/0:80.9472:24:24:896:0:0:0,-7.22472,-10 0/0:86.9673:26:26:979:0:0:0,-7.82678,-10 0/0:86.9673:26:26:966:0:0:0,-7.82678,-10 0/0:99:58:58:2136:0:0:0,-10,-10 0/0:35.7929:9:9:332:0:0:0,-2.70927,-10 0/0:23.7517:5:5:190:0:0:0,-1.50515,-10 1/1:14.6174:17:0:0:17:597:-10,-5.11751,0 0/0:59.8753:17:17:640:0:0:0,-5.11751,-10 0/0:86.9673:26:26:948:0:0:0,-7.82678,-10 0/0:50.8444:14:14:520:0:0:0,-4.21442,-10 0/0:53.8547:15:15:501:0:0:0,-4.51545,-10 0/0:99:42:42:1571:0:0:0,-10,-10 0/0:74.9267:22:22:807:0:0:0,-6.62266,-10 0/1:99:17:7:258:10:377:-10,0,-10 0/0:99:52:51:1832:1:38:0,-10,-10 0/0:99:34:34:1202:0:0:0,-10,-10 0/0:83.9576:25:25:896:0:0:0,-7.52575,-10 0/0:99:37:37:1367:0:0:0,-10,-10 1/1:59.7719:32:0:0:32:1165:-10,-9.63296,0 0/0:50.8444:14:14:513:0:0:0,-4.21442,-10 0/0:99:69:68:2529:1:33:0,-10,-10 0/0:77.937:23:23:826:0:0:0,-6.92369,-10 0/0:68.9061:20:20:724:0:0:0,-6.0206,-10 0/0:94.8174:38:37:1363:1:16:0,-8.25936,-10 0/0:59.8753:17:17:646:0:0:0,-5.11751,-10 0/1:99:40:21:780:19:717:-10,0,-10 0/0:74.9267:22:22:779:0:0:0,-6.62266,-10 0/0:32.7826:8:8:302:0:0:0,-2.40824,-10 0/0:99:62:62:2296:0:0:0,-10,-10 .:.:.:.:.:.:.:. 0/0:99:31:31:1163:0:0:0,-9.33193,-10 0/0:32.7826:8:8:288:0:0:0,-2.40824,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:68.9061:20:20:743:0:0:0,-6.0206,-10 0/0:99:64:64:2372:0:0:0,-10,-10 0/0:80.9472:24:24:863:0:0:0,-7.22472,-10 0/0:99:57:57:2100:0:0:0,-10,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:59.8753:17:17:624:0:0:0,-5.11751,-10 0/0:99:46:46:1658:0:0:0,-10,-10 0/0:80.9472:24:24:905:0:0:0,-7.22472,-10 0/0:47.8341:13:13:459:0:0:0,-3.91339,-10 0/0:99:56:56:2091:0:0:0,-10,-10 0/0:53.8547:15:15:568:0:0:0,-4.51545,-10 0/0:99:34:34:1271:0:0:0,-10,-10 0/0:99:41:41:1484:0:0:0,-10,-10 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:56.865:16:16:605:0:0:0,-4.81648,-10 0/0:99:40:40:1478:0:0:0,-10,-10 0/0:59.8753:17:17:592:0:0:0,-5.11751,-10 0/0:59.8753:17:17:629:0:0:0,-5.11751,-10 0/0:41.5507:19:18:659:1:14:0,-3.04082,-10 0/0:23.7517:5:5:190:0:0:0,-1.50515,-10 0/0:50.8444:14:14:509:0:0:0,-4.21442,-10 0/0:99:43:43:1578:0:0:0,-10,-10 0/0:99:40:40:1443:0:0:0,-10,-10 0/0:99:37:37:1378:0:0:0,-10,-10 0/0:99:45:45:1666:0:0:0,-10,-10 0/0:99:39:39:1437:0:0:0,-10,-10 0/0:44.8238:12:12:435:0:0:0,-3.61236,-10 0/0:99:32:32:1199:0:0:0,-9.63296,-10 1/1:14.6174:17:0:0:17:634:-10,-5.11751,0 0/0:32.7826:8:8:293:0:0:0,-2.40824,-10 0/0:99:32:32:1199:0:0:0,-9.63296,-10 0/0:59.8753:17:17:625:0:0:0,-5.11751,-10 0/0:80.9472:24:24:883:0:0:0,-7.22472,-10 scaffold_197 709275 . C G 3681.3 . AB=0.448485;ABP=6.81367;AC=10;AF=0.0549451;AN=182;AO=148;CIGAR=1X1M2I3M;DP=2559;DPB=2618;DPRA=1.23621;EPP=3.94932;EPPR=3.0683;GTI=0;LEN=1;MEANALT=1.14286;MQM=54.9122;MQMR=60;NS=91;NUMALT=1;ODDS=4.56816;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4995;QR=85819;RO=2396;RPP=324.388;RPPR=5188.5;RUN=1;SAF=78;SAP=3.94932;SAR=70;SRF=1194;SRP=3.0683;SRR=1202;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:65.1559:19:19:667:0:0:0,-5.71957,-10 0|0:53.1147:15:15:537:0:0:0,-4.51545,-10 0|0:92.2478:28:28:1007:0:0:0,-8.42884,-10 0|0:62.1456:18:18:612:0:0:0,-5.41854,-10 0|0:65.1559:19:19:673:0:0:0,-5.71957,-10 0|0:56.125:16:16:576:0:0:0,-4.81648,-10 0|0:99:50:50:1769:0:0:0,-10,-10 0|0:99:43:43:1555:0:0:0,-10,-10 0|0:68.1662:20:20:717:0:0:0,-6.0206,-10 0|0:29.0323:7:7:248:0:0:0,-2.10721,-10 0|0:59.1353:17:17:616:0:0:0,-5.11751,-10 0|0:20.0014:4:4:150:0:0:0,-1.20412,-10 0|0:99:42:42:1497:0:0:0,-10,-10 0|0:99:51:50:1785:0:0:0,-10,-10 0|0:99:31:31:1111:0:0:0,-9.33193,-10 0|0:99:37:36:1310:0:0:0,-10,-10 0|0:99:32:32:1158:0:0:0,-9.63296,-10 0|0:50.1044:14:14:502:0:0:0,-4.21442,-10 0|0:80.2073:24:24:876:0:0:0,-7.22472,-10 0|0:99:54:54:1871:0:0:0,-10,-10 0|0:80.2073:24:24:841:0:0:0,-7.22472,-10 0|0:99:45:45:1650:0:0:0,-10,-10 0|0:47.0941:13:13:470:0:0:0,-3.91339,-10 0|1:99:20:11:410:9:331:-10,0,-10 0|0:99:42:42:1463:0:0:0,-10,-10 0|0:99:45:44:1542:0:0:0,-10,-10 0|0:80.2073:24:24:865:0:0:0,-7.22472,-10 0|0:86.2278:26:26:961:0:0:0,-7.82678,-10 0|0:86.2278:26:26:933:0:0:0,-7.82678,-10 0|0:99:58:58:2038:0:0:0,-10,-10 0|0:35.0529:9:9:323:0:0:0,-2.70927,-10 0|0:20.0014:5:4:152:0:0:0,-1.20412,-10 0|0:59.1353:17:17:605:0:0:0,-5.11751,-10 0|0:59.1353:17:17:589:0:0:0,-5.11751,-10 0|0:83.2176:26:25:902:0:0:0,-7.52575,-10 0|0:50.1044:14:14:476:0:0:0,-4.21442,-10 0|0:53.1147:15:15:489:0:0:0,-4.51545,-10 0|0:99:42:42:1517:0:0:0,-10,-10 0|0:74.1868:22:22:783:0:0:0,-6.62266,-10 0|0:59.1353:17:17:601:0:0:0,-5.11751,-10 0|0:99:52:51:1827:0:0:0,-10,-10 0|0:99:34:34:1167:0:0:0,-10,-10 0|0:83.2176:25:25:899:0:0:0,-7.52575,-10 0|0:99:37:36:1328:0:0:0,-10,-10 0|0:99:32:31:1128:0:0:0,-9.33193,-10 0|1:99:14:9:329:5:163:-10,0,-10 0|1:99:69:37:1324:31:1055:-10,0,-10 1|1:30.488:23:0:0:23:731:-10,-6.92369,0 1|1:21.4571:20:0:0:20:617:-10,-6.0206,0 0|0:99:38:38:1350:0:0:0,-10,-10 0|0:59.1353:17:17:636:0:0:0,-5.11751,-10 0|0:99:40:40:1422:0:0:0,-10,-10 0|0:74.1868:22:22:769:0:0:0,-6.62266,-10 0|0:32.0426:8:8:294:0:0:0,-2.40824,-10 0|1:99:62:33:1159:29:977:-10,0,-10 .:.:.:.:.:.:.:. 1|1:54.5704:31:0:0:31:1121:-10,-9.33193,0 0|0:32.0426:8:8:259:0:0:0,-2.40824,-10 0|0:99:31:31:1105:0:0:0,-9.33193,-10 0|0:68.1662:20:20:708:0:0:0,-6.0206,-10 0|0:99:64:64:2334:0:0:0,-10,-10 0|0:80.2073:24:24:844:0:0:0,-7.22472,-10 0|0:99:57:57:2007:0:0:0,-10,-10 0|0:99:31:31:1147:0:0:0,-9.33193,-10 0|0:59.1353:17:17:610:0:0:0,-5.11751,-10 0|0:99:46:46:1687:0:0:0,-10,-10 0|0:80.2073:24:24:876:0:0:0,-7.22472,-10 0|0:44.0838:13:12:430:0:0:0,-3.61236,-10 0|0:99:56:55:1997:0:0:0,-10,-10 0|0:53.1147:15:15:555:0:0:0,-4.51545,-10 0|0:99:34:34:1253:0:0:0,-10,-10 0|0:99:41:41:1445:0:0:0,-10,-10 0|0:99:32:31:1110:0:0:0,-9.33193,-10 0|0:53.1147:16:15:547:0:0:0,-4.51545,-10 0|0:99:40:40:1442:0:0:0,-10,-10 0|0:59.1353:17:17:582:0:0:0,-5.11751,-10 0|0:59.1353:17:17:609:0:0:0,-5.11751,-10 0|0:65.1559:19:19:678:0:0:0,-5.71957,-10 0|0:23.0117:5:5:180:0:0:0,-1.50515,-10 0|0:50.1044:14:14:520:0:0:0,-4.21442,-10 0|0:99:43:43:1559:0:0:0,-10,-10 0|0:99:40:40:1434:0:0:0,-10,-10 0|0:99:37:37:1307:0:0:0,-10,-10 0|0:99:45:45:1616:0:0:0,-10,-10 0|0:99:39:38:1375:0:0:0,-10,-10 0|0:44.0838:12:12:428:0:0:0,-3.61236,-10 0|0:99:32:32:1166:0:0:0,-9.63296,-10 0|0:59.1353:17:17:618:0:0:0,-5.11751,-10 0|0:32.0426:8:8:282:0:0:0,-2.40824,-10 0|0:99:32:32:1173:0:0:0,-9.63296,-10 0|0:59.1353:17:17:608:0:0:0,-5.11751,-10 0|0:77.197:24:23:849:0:0:0,-6.92369,-10 scaffold_197 709276 . C CGG 3681.3 . AB=0.448485;ABP=6.81367;AC=10;AF=0.0549451;AN=182;AO=148;CIGAR=1X1M2I3M;DP=2559;DPB=2618;DPRA=1.23621;EPP=3.94932;EPPR=3.0683;GTI=0;LEN=2;MEANALT=1.14286;MQM=54.9122;MQMR=60;NS=91;NUMALT=1;ODDS=4.56816;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4995;QR=85819;RO=2396;RPP=324.388;RPPR=5188.5;RUN=1;SAF=78;SAP=3.94932;SAR=70;SRF=1194;SRP=3.0683;SRR=1202;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:65.1559:19:19:667:0:0:0,-5.71957,-10 0|0:53.1147:15:15:537:0:0:0,-4.51545,-10 0|0:92.2478:28:28:1007:0:0:0,-8.42884,-10 0|0:62.1456:18:18:612:0:0:0,-5.41854,-10 0|0:65.1559:19:19:673:0:0:0,-5.71957,-10 0|0:56.125:16:16:576:0:0:0,-4.81648,-10 0|0:99:50:50:1769:0:0:0,-10,-10 0|0:99:43:43:1555:0:0:0,-10,-10 0|0:68.1662:20:20:717:0:0:0,-6.0206,-10 0|0:29.0323:7:7:248:0:0:0,-2.10721,-10 0|0:59.1353:17:17:616:0:0:0,-5.11751,-10 0|0:20.0014:4:4:150:0:0:0,-1.20412,-10 0|0:99:42:42:1497:0:0:0,-10,-10 0|0:99:51:50:1785:0:0:0,-10,-10 0|0:99:31:31:1111:0:0:0,-9.33193,-10 0|0:99:37:36:1310:0:0:0,-10,-10 0|0:99:32:32:1158:0:0:0,-9.63296,-10 0|0:50.1044:14:14:502:0:0:0,-4.21442,-10 0|0:80.2073:24:24:876:0:0:0,-7.22472,-10 0|0:99:54:54:1871:0:0:0,-10,-10 0|0:80.2073:24:24:841:0:0:0,-7.22472,-10 0|0:99:45:45:1650:0:0:0,-10,-10 0|0:47.0941:13:13:470:0:0:0,-3.91339,-10 0|1:99:20:11:410:9:331:-10,0,-10 0|0:99:42:42:1463:0:0:0,-10,-10 0|0:99:45:44:1542:0:0:0,-10,-10 0|0:80.2073:24:24:865:0:0:0,-7.22472,-10 0|0:86.2278:26:26:961:0:0:0,-7.82678,-10 0|0:86.2278:26:26:933:0:0:0,-7.82678,-10 0|0:99:58:58:2038:0:0:0,-10,-10 0|0:35.0529:9:9:323:0:0:0,-2.70927,-10 0|0:20.0014:5:4:152:0:0:0,-1.20412,-10 0|0:59.1353:17:17:605:0:0:0,-5.11751,-10 0|0:59.1353:17:17:589:0:0:0,-5.11751,-10 0|0:83.2176:26:25:902:0:0:0,-7.52575,-10 0|0:50.1044:14:14:476:0:0:0,-4.21442,-10 0|0:53.1147:15:15:489:0:0:0,-4.51545,-10 0|0:99:42:42:1517:0:0:0,-10,-10 0|0:74.1868:22:22:783:0:0:0,-6.62266,-10 0|0:59.1353:17:17:601:0:0:0,-5.11751,-10 0|0:99:52:51:1827:0:0:0,-10,-10 0|0:99:34:34:1167:0:0:0,-10,-10 0|0:83.2176:25:25:899:0:0:0,-7.52575,-10 0|0:99:37:36:1328:0:0:0,-10,-10 0|0:99:32:31:1128:0:0:0,-9.33193,-10 0|1:99:14:9:329:5:163:-10,0,-10 0|1:99:69:37:1324:31:1055:-10,0,-10 1|1:30.488:23:0:0:23:731:-10,-6.92369,0 1|1:21.4571:20:0:0:20:617:-10,-6.0206,0 0|0:99:38:38:1350:0:0:0,-10,-10 0|0:59.1353:17:17:636:0:0:0,-5.11751,-10 0|0:99:40:40:1422:0:0:0,-10,-10 0|0:74.1868:22:22:769:0:0:0,-6.62266,-10 0|0:32.0426:8:8:294:0:0:0,-2.40824,-10 0|1:99:62:33:1159:29:977:-10,0,-10 .:.:.:.:.:.:.:. 1|1:54.5704:31:0:0:31:1121:-10,-9.33193,0 0|0:32.0426:8:8:259:0:0:0,-2.40824,-10 0|0:99:31:31:1105:0:0:0,-9.33193,-10 0|0:68.1662:20:20:708:0:0:0,-6.0206,-10 0|0:99:64:64:2334:0:0:0,-10,-10 0|0:80.2073:24:24:844:0:0:0,-7.22472,-10 0|0:99:57:57:2007:0:0:0,-10,-10 0|0:99:31:31:1147:0:0:0,-9.33193,-10 0|0:59.1353:17:17:610:0:0:0,-5.11751,-10 0|0:99:46:46:1687:0:0:0,-10,-10 0|0:80.2073:24:24:876:0:0:0,-7.22472,-10 0|0:44.0838:13:12:430:0:0:0,-3.61236,-10 0|0:99:56:55:1997:0:0:0,-10,-10 0|0:53.1147:15:15:555:0:0:0,-4.51545,-10 0|0:99:34:34:1253:0:0:0,-10,-10 0|0:99:41:41:1445:0:0:0,-10,-10 0|0:99:32:31:1110:0:0:0,-9.33193,-10 0|0:53.1147:16:15:547:0:0:0,-4.51545,-10 0|0:99:40:40:1442:0:0:0,-10,-10 0|0:59.1353:17:17:582:0:0:0,-5.11751,-10 0|0:59.1353:17:17:609:0:0:0,-5.11751,-10 0|0:65.1559:19:19:678:0:0:0,-5.71957,-10 0|0:23.0117:5:5:180:0:0:0,-1.50515,-10 0|0:50.1044:14:14:520:0:0:0,-4.21442,-10 0|0:99:43:43:1559:0:0:0,-10,-10 0|0:99:40:40:1434:0:0:0,-10,-10 0|0:99:37:37:1307:0:0:0,-10,-10 0|0:99:45:45:1616:0:0:0,-10,-10 0|0:99:39:38:1375:0:0:0,-10,-10 0|0:44.0838:12:12:428:0:0:0,-3.61236,-10 0|0:99:32:32:1166:0:0:0,-9.63296,-10 0|0:59.1353:17:17:618:0:0:0,-5.11751,-10 0|0:32.0426:8:8:282:0:0:0,-2.40824,-10 0|0:99:32:32:1173:0:0:0,-9.63296,-10 0|0:59.1353:17:17:608:0:0:0,-5.11751,-10 0|0:77.197:24:23:849:0:0:0,-6.92369,-10 scaffold_197 720523 . C T 2504.35 . AB=0.647887;ABP=16.4979;AC=9;AF=0.0483871;AN=186;AO=95;CIGAR=1X;DP=2310;DPB=2310;DPRA=0.847424;EPP=8.15326;EPPR=3.10838;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.921;NS=93;NUMALT=1;ODDS=0.184865;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3510;QR=80461;RO=2214;RPP=145.665;RPPR=4377.87;RUN=1;SAF=51;SAP=4.13032;SAR=44;SRF=1083;SRP=5.27004;SRR=1131;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.358809:17:0:0:17:632:-10,-5.11751,0 0/0:52.2093:8:8:304:0:0:0,-2.40824,-10 1/1:27.9802:27:0:0:27:1021:-10,-8.12781,0 0/0:67.2608:13:13:437:0:0:0,-3.91339,-10 0/0:76.2917:16:16:586:0:0:0,-4.81648,-10 0/0:58.2299:10:10:380:0:0:0,-3.0103,-10 0/0:99:54:54:1936:0:0:0,-10,-10 0/0:99:27:26:953:0:0:0,-7.82678,-10 0/0:82.3122:18:18:616:0:0:0,-5.41854,-10 0/0:52.2093:8:8:280:0:0:0,-2.40824,-10 0/0:52.2093:8:8:303:0:0:0,-2.40824,-10 0/0:43.1784:5:5:190:0:0:0,-1.50515,-10 0/0:99:39:39:1379:0:0:0,-10,-10 0/0:99:52:52:1878:0:0:0,-10,-10 0/0:99:37:37:1289:0:0:0,-10,-10 0/0:62.1086:28:27:985:1:38:0,-3.18168,-10 0/0:99:28:28:1053:0:0:0,-8.42884,-10 0/0:58.2299:10:10:380:0:0:0,-3.0103,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:99:56:56:2041:0:0:0,-10,-10 0/0:99:25:25:905:0:0:0,-7.52575,-10 0/0:99:41:41:1519:0:0:0,-10,-10 0/0:61.2402:11:11:388:0:0:0,-3.31133,-10 0/0:99:29:29:1009:0:0:0,-8.72987,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:88.3324:20:20:700:0:0:0,-6.0206,-10 0/0:79.302:17:17:641:0:0:0,-5.11751,-10 0/0:99:28:28:948:0:0:0,-8.42884,-10 0/0:99:48:48:1772:0:0:0,-10,-10 0/1:2.10197e-05:3:0:0:3:92:-8.58667,-0.90309,0 0/0:43.1784:5:5:166:0:0:0,-1.50515,-10 0/0:79.302:17:17:630:0:0:0,-5.11751,-10 0/0:73.2814:15:15:546:0:0:0,-4.51545,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:67.2608:13:13:488:0:0:0,-3.91339,-10 0/0:85.3224:19:19:693:0:0:0,-5.71957,-10 0/0:99:28:28:940:0:0:0,-8.42884,-10 0/0:99:25:25:933:0:0:0,-7.52575,-10 0/0:79.302:17:17:624:0:0:0,-5.11751,-10 0/0:99:41:41:1514:0:0:0,-10,-10 0/0:99:24:24:879:0:0:0,-7.22472,-10 0/0:99:26:26:952:0:0:0,-7.82678,-10 0/0:99:53:53:1886:0:0:0,-10,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:70.2711:14:14:507:0:0:0,-4.21442,-10 0/0:99:61:61:2238:0:0:0,-10,-10 0/0:95.5707:32:31:1142:1:16:0,-6.52781,-10 0/0:55.2196:9:9:334:0:0:0,-2.70927,-10 0/0:99:51:51:1867:0:0:0,-10,-10 0/0:58.2299:10:10:376:0:0:0,-3.0103,-10 0/0:99:52:52:1873:0:0:0,-10,-10 0/0:91.3422:21:21:767:0:0:0,-6.32163,-10 0/0:52.2093:8:8:297:0:0:0,-2.40824,-10 0/0:99:52:52:1902:0:0:0,-10,-10 0/0:76.2917:16:16:573:0:0:0,-4.81648,-10 0/0:99:39:39:1388:0:0:0,-10,-10 0/0:49.199:7:7:253:0:0:0,-2.10721,-10 0/0:99:27:27:991:0:0:0,-8.12781,-10 0/0:73.2814:15:15:559:0:0:0,-4.51545,-10 0/0:99:41:41:1492:0:0:0,-10,-10 0/0:99:28:28:1019:0:0:0,-8.42884,-10 0/0:99:44:44:1559:0:0:0,-10,-10 0/0:94.3515:22:22:802:0:0:0,-6.62266,-10 0/0:85.3224:19:19:602:0:0:0,-5.71957,-10 0/0:99:33:33:1249:0:0:0,-9.93399,-10 0/0:70.2711:14:14:518:0:0:0,-4.21442,-10 0/0:79.302:17:17:627:0:0:0,-5.11751,-10 0/0:99:51:51:1877:0:0:0,-10,-10 0/0:70.2711:14:14:502:0:0:0,-4.21442,-10 0/0:82.3122:18:18:682:0:0:0,-5.41854,-10 0/0:99:39:39:1375:0:0:0,-10,-10 0/0:99:40:40:1485:0:0:0,-10,-10 0/0:97.3598:23:23:798:0:0:0,-6.92369,-10 0/0:99:37:36:1335:1:16:0,-7.96991,-10 0/0:88.3324:20:20:692:0:0:0,-6.0206,-10 0/0:85.3224:19:19:719:0:0:0,-5.71957,-10 0/0:79.302:17:17:618:0:0:0,-5.11751,-10 0/0:34.1475:2:2:76:0:0:0,-0.60206,-7.22 0/0:88.3324:20:20:733:0:0:0,-6.0206,-10 0/0:99:36:36:1333:0:0:0,-10,-10 0/0:99:31:31:1165:0:0:0,-9.33193,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/1:99:27:22:780:5:190:-10,0,-10 0/0:99:41:41:1530:0:0:0,-10,-10 0/0:46.1887:6:6:204:0:0:0,-1.80618,-10 0/0:97.3598:23:23:844:0:0:0,-6.92369,-10 0/0:58.2299:10:10:377:0:0:0,-3.0103,-10 0/1:99:9:3:100:6:226:-10,0,-8.54834 0/1:0.0869614:15:0:0:15:566:-10,-4.51545,0 0/0:76.2917:16:16:587:0:0:0,-4.81648,-10 1/1:3.89785:19:0:0:19:713:-10,-5.71957,0 scaffold_197 809254 . CAG C 31609 . AB=0.503448;ABP=3.02528;AC=142;AF=0.771739;AN=184;AO=1150;CIGAR=1M2D1M;DP=1532;DPB=957;DPRA=0.900901;EPP=3.19912;EPPR=3.01609;GTI=3;LEN=2;MEANALT=1.05405;MQM=59.9896;MQMR=59.9653;NS=92;NUMALT=1;ODDS=0.132823;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=39608;QR=13591;RO=375;RPP=2448.36;RPPR=791.463;RUN=1;SAF=586;SAP=3.92421;SAR=564;SRF=190;SRP=3.15506;SRR=185;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 1|1:56.4207:19:0:0:19:658:-10,-5.71957,0 1|1:32.3383:11:0:0:11:363:-10,-3.31133,0 1|1:29.328:10:0:0:10:373:-10,-3.0103,0 1|1:17.2868:6:0:0:6:192:-10,-1.80618,0 1|1:32.3383:11:0:0:11:331:-10,-3.31133,0 1|1:41.3692:14:0:0:14:421:-10,-4.21442,0 1|1:68.4619:23:0:0:23:825:-10,-6.92369,0 1|1:68.4619:23:0:0:23:767:-10,-6.92369,0 1|1:41.3692:14:0:0:14:453:-10,-4.21442,0 1|1:8.25593:3:0:0:3:109:-10,-0.90309,0 1|1:26.3177:9:0:0:9:325:-10,-2.70927,0 0|1:0.270827:2:0:0:2:54:-5.13,-0.60206,0 1|1:92.5431:31:0:0:31:1104:-10,-9.33193,0 1|1:80.5031:27:0:0:27:883:-10,-8.12781,0 1|1:56.4207:19:0:0:19:689:-10,-5.71957,0 1|1:53.4104:18:0:0:18:575:-10,-5.41854,0 1|1:80.5031:27:0:0:27:981:-10,-8.12781,0 1|1:20.2971:7:0:0:7:235:-10,-2.10721,0 1|1:47.3898:16:0:0:16:554:-10,-4.81648,0 0|0:54.7688:24:24:873:0:0:0,-7.22472,-10 0|1:99:12:8:289:4:128:-10,0,-10 0|1:99:29:12:451:17:601:-10,0,-10 0|0:27.6761:15:15:556:0:0:0,-4.51545,-10 0|0:27.6761:15:15:554:0:0:0,-4.51545,-10 1|1:71.4722:24:0:0:24:784:-10,-7.22472,0 0|0:36.707:18:18:637:0:0:0,-5.41854,-10 1|1:29.328:10:0:0:10:328:-10,-3.0103,0 1|1:38.3589:13:0:0:13:484:-10,-3.91339,0 1|1:56.4207:19:0:0:19:660:-10,-5.71957,0 0|1:99:19:12:439:7:210:-10,0,-10 1|1:29.328:10:0:0:10:355:-10,-3.0103,0 1|1:29.328:10:0:0:10:340:-10,-3.0103,0 0|0:24.6658:14:14:523:0:0:0,-4.21442,-10 0|1:0.159433:7:7:245:0:0:0,-2.10721,-10 1|1:59.431:20:0:0:20:710:-10,-6.0206,0 1|1:11.2662:4:0:0:4:147:-10,-1.20412,0 1|1:29.328:10:0:0:10:365:-10,-3.0103,0 0|1:99:28:13:441:15:531:-10,0,-10 1|1:53.4104:18:0:0:18:611:-10,-5.41854,0 0|1:81.3078:9:3:87:6:225:-10,0,-7.33501 1|1:71.4722:24:0:0:24:816:-10,-7.22472,0 1|1:18.1772:22:1:37:21:720:-10,-1.58024,0 1|1:38.3589:13:0:0:13:417:-10,-3.91339,0 1|1:68.4619:24:0:0:23:792:-10,-6.92369,0 0|0:42.7276:20:20:691:0:0:0,-6.0206,-10 0|0:24.6658:14:14:518:0:0:0,-4.21442,-10 0|0:78.8511:32:32:1164:0:0:0,-9.63296,-10 0|0:21.6555:13:13:461:0:0:0,-3.91339,-10 0|0:21.6555:14:13:486:0:0:0,-3.91339,-10 0|1:99:21:10:346:10:375:-10,0,-10 0|0:9.61427:9:9:329:0:0:0,-2.70927,-10 0|1:99:25:12:414:12:411:-10,0,-10 1|1:41.3692:14:0:0:14:490:-10,-4.21442,0 0|1:0.0789848:6:6:223:0:0:0,-1.80618,-10 0|0:84.8716:34:34:1252:0:0:0,-10,-10 0|0:36.707:18:18:665:0:0:0,-5.41854,-10 0|0:57.7791:27:25:921:0:0:0,-7.52575,-10 1|1:17.2868:6:0:0:6:194:-10,-1.80618,0 1|1:50.4001:17:0:0:17:620:-10,-5.11751,0 1|1:17.2868:6:0:0:6:218:-10,-1.80618,0 1|1:95.5521:32:0:0:32:1118:-10,-9.63296,0 1|1:35.3486:12:0:0:12:423:-10,-3.61236,0 1|1:68.4619:23:0:0:23:790:-10,-6.92369,0 1|1:77.4928:26:0:0:26:834:-10,-7.82678,0 1|1:47.3898:16:0:0:16:557:-10,-4.81648,0 1|1:99:40:0:0:39:1306:-10,-10,0 1|1:41.3692:14:0:0:14:525:-10,-4.21442,0 1|1:20.2971:7:0:0:7:261:-10,-2.10721,0 1|1:86.5234:29:0:0:29:1029:-10,-8.72987,0 1|1:26.3177:9:0:0:9:310:-10,-2.70927,0 1|1:35.3486:12:0:0:12:424:-10,-3.61236,0 1|1:77.4928:26:0:0:26:894:-10,-7.82678,0 1|1:47.3898:16:0:0:16:539:-10,-4.81648,0 1|1:26.3177:9:0:0:9:328:-10,-2.70927,0 1|1:80.5031:27:0:0:27:963:-10,-8.12781,0 1|1:32.3383:11:0:0:11:368:-10,-3.31133,0 1|1:44.3795:15:0:0:15:514:-10,-4.51545,0 1|1:26.3177:9:0:0:9:266:-10,-2.70927,0 1|1:8.25593:3:0:0:3:97:-9.05333,-0.90309,0 1|1:50.4001:17:0:0:17:533:-10,-5.11751,0 1|1:86.5234:29:0:0:29:1041:-10,-8.72987,0 1|1:65.4516:22:0:0:22:752:-10,-6.62266,0 1|1:62.4413:21:0:0:21:708:-10,-6.32163,0 1|1:56.4207:19:0:0:19:711:-10,-5.71957,0 1|1:59.431:20:0:0:20:688:-10,-6.0206,0 1|1:20.2971:7:0:0:7:264:-10,-2.10721,0 0|0:18.6452:12:12:432:0:0:0,-3.61236,-10 0|0:27.6761:15:15:557:0:0:0,-4.51545,-10 1|1:11.2662:4:0:0:4:128:-10,-1.20412,0 1|1:62.4413:21:0:0:21:727:-10,-6.32163,0 1|1:47.3898:16:0:0:16:521:-10,-4.81648,0 1|1:47.3898:16:0:0:16:565:-10,-4.81648,0 scaffold_197 976573 . AAG A 20537.1 . AB=0.53668;ABP=9.06359;AC=83;AF=0.451087;AN=184;AO=799;CIGAR=1M2D1M;DP=1855;DPB=1455.75;DPRA=0.981595;EPP=4.20882;EPPR=6.67934;GTI=1;LEN=2;MEANALT=1.05769;MQM=59.985;MQMR=59.9741;NS=92;NUMALT=1;ODDS=0.0494612;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=0;PQR=0;PRO=0.5;QA=26560;QR=37038;RO=1044;RPP=1712.06;RPPR=2244.04;RUN=1;SAF=413;SAP=4.99153;SAR=386;SRF=504;SRP=5.70592;SRR=540;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 1|1:12.9355:7:0:0:7:263:-10,-2.10721,0 0|0:22.5828:8:7:258:0:0:0,-2.10721,-10 0|1:99:22:15:542:7:228:-10,0,-10 0|1:1.341:5:0:0:5:142:-10,-1.50515,0 1|1:24.9767:11:0:0:11:355:-10,-3.31133,0 0|0:37.6343:12:12:418:0:0:0,-3.61236,-10 1|1:79.1621:29:0:0:29:943:-10,-8.72987,0 0|0:64.727:21:21:755:0:0:0,-6.32163,-10 0|0:55.6961:18:18:632:0:0:0,-5.41854,-10 1|1:9.92523:6:0:0:6:213:-10,-1.80618,0 1|1:21.9664:10:0:0:10:331:-10,-3.0103,0 1|1:21.9664:10:0:0:10:331:-10,-3.0103,0 0|1:99:28:11:388:17:546:-10,0,-10 1|1:99:37:0:0:37:1242:-10,-10,0 0|0:70.7476:23:23:797:0:0:0,-6.92369,-10 0|1:99:34:20:667:14:448:-10,0,-10 0|1:99:32:12:438:19:621:-10,0,-10 1|1:34.0076:14:0:0:14:465:-10,-4.21442,0 1|1:52.0694:20:0:0:20:604:-10,-6.0206,0 0|0:97.8362:33:32:1106:0:0:0,-9.63296,-10 0|1:99:17:7:249:10:350:-10,0,-10 0|1:99:26:18:672:8:269:-10,0,-10 0|0:37.6343:12:12:421:0:0:0,-3.61236,-10 0|0:76.7681:26:25:907:0:0:0,-7.52575,-10 1|1:46.0488:18:0:0:18:549:-10,-5.41854,0 0|0:79.7784:26:26:934:0:0:0,-7.82678,-10 1|1:37.0179:15:0:0:15:526:-10,-4.51545,0 1|1:40.0282:16:0:0:16:539:-10,-4.81648,0 0|0:61.7167:20:20:675:0:0:0,-6.0206,-10 0|1:99:31:13:454:18:610:-10,0,-10 0|0:13.5519:4:4:123:0:0:0,-1.20412,-10 1|1:27.987:12:0:0:12:397:-10,-3.61236,0 0|0:55.6961:18:18:643:0:0:0,-5.41854,-10 0|0:34.624:11:11:393:0:0:0,-3.31133,-10 1|1:70.1312:26:0:0:26:906:-10,-7.82678,0 1|1:12.9355:7:0:0:7:214:-10,-2.10721,0 1|1:30.9973:13:0:0:13:474:-10,-3.91339,0 0|1:99:24:14:508:10:335:-10,0,-10 1|1:49.0591:19:0:0:19:611:-10,-5.71957,0 0|1:99:13:8:291:5:186:-10,0,-10 0|1:99:24:7:256:17:618:-10,0,-10 0|1:32.4144:21:2:61:19:657:-10,0,-1.79559 1|1:55.0797:21:0:0:21:742:-10,-6.32163,0 0|0:99:39:39:1364:0:0:0,-10,-10 0|0:73.7579:26:24:853:0:0:0,-7.22472,-10 0|0:28.6034:9:9:312:0:0:0,-2.70927,-10 0|0:99:36:36:1285:0:0:0,-10,-10 0|0:99:33:33:1169:0:0:0,-9.93399,-10 0|0:52.6858:18:17:615:0:0:0,-5.11751,-10 0|1:99:35:16:563:19:601:-10,0,-10 0|0:70.7476:23:23:840:0:0:0,-6.92369,-10 0|1:99:33:17:608:16:556:-10,0,-10 1|1:46.0488:18:0:0:18:615:-10,-5.41854,0 0|0:22.5828:7:7:247:0:0:0,-2.10721,-10 0|0:99:46:44:1572:0:0:0,-10,-10 0|0:46.6652:15:15:522:0:0:0,-4.51545,-10 0|0:70.7476:23:23:776:0:0:0,-6.92369,-10 0|0:43.6549:14:14:500:0:0:0,-4.21442,-10 0|0:46.6652:15:15:529:0:0:0,-4.51545,-10 0|0:22.5828:8:7:256:0:0:0,-2.10721,-10 1|1:67.1209:25:0:0:25:872:-10,-7.52575,0 0|0:99:38:38:1318:0:0:0,-10,-10 0|0:99:42:42:1527:0:0:0,-10,-10 1|1:49.0591:19:0:0:19:626:-10,-5.71957,0 0|0:22.5828:7:7:249:0:0:0,-2.10721,-10 0|0:99:34:34:1177:0:0:0,-10,-10 0|0:88.8089:29:29:1044:0:0:0,-8.72987,-10 1|1:27.987:12:0:0:12:437:-10,-3.61236,0 0|1:99:37:14:511:23:721:-10,0,-10 1|1:9.92523:6:0:0:6:223:-10,-1.80618,0 0|0:25.5931:8:8:290:0:0:0,-2.40824,-10 0|1:99:46:22:797:24:812:-10,0,-10 0|0:73.7579:24:24:850:0:0:0,-7.22472,-10 0|0:34.624:11:11:389:0:0:0,-3.31133,-10 0|0:79.7784:26:26:898:0:0:0,-7.82678,-10 1|1:43.0385:17:0:0:17:570:-10,-5.11751,0 0|0:40.6446:13:13:480:0:0:0,-3.91339,-10 0|0:28.6034:9:9:326:0:0:0,-2.70927,-10 1|1:12.9355:7:0:0:7:219:-10,-2.10721,0 1|1:40.0282:16:0:0:16:514:-10,-4.81648,0 1|1:94.2145:34:0:0:34:1079:-10,-10,0 1|1:88.1926:32:0:0:32:981:-10,-9.63296,0 0|1:99:20:10:362:10:354:-10,0,-10 0|1:99:27:11:401:15:508:-10,0,-10 1|1:55.0797:21:0:0:21:701:-10,-6.32163,0 1|1:24.9767:11:0:0:11:376:-10,-3.31133,0 0|0:49.6755:16:16:582:0:0:0,-4.81648,-10 0|0:43.6549:14:14:499:0:0:0,-4.21442,-10 0|1:79.9784:5:2:75:3:110:-9.76152,0,-6.61985 0|1:99:18:8:281:10:337:-10,0,-10 0|1:99:20:11:383:9:280:-10,0,-10 1|1:27.987:13:0:0:12:353:-10,-3.61236,0 scaffold_197 976631 . T C 781.96 . AB=0.767442;ABP=29.7245;AC=2;AF=0.0108696;AN=184;AO=35;CIGAR=1X;DP=1877;DPB=1877;DPRA=1.08217;EPP=8.03571;EPPR=3.12831;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9402;NS=92;NUMALT=1;ODDS=1.10778;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1225;QR=68149;RO=1840;RPP=79.0118;RPPR=3843.7;RUN=1;SAF=13;SAP=8.03571;SAR=22;SRF=933;SRP=3.80808;SRR=907;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:67.3275:19:19:705:0:0:0,-5.71957,-10 0/0:37.2245:9:9:342:0:0:0,-2.70927,-10 0/0:64.3172:18:18:662:0:0:0,-5.41854,-10 0/0:43.2451:11:11:404:0:0:0,-3.31133,-10 0/0:58.2966:16:16:557:0:0:0,-4.81648,-10 0/0:34.2142:8:8:294:0:0:0,-2.40824,-10 0/0:99:33:33:1247:0:0:0,-9.93399,-10 0/0:70.3378:20:20:748:0:0:0,-6.0206,-10 0/0:52.276:14:14:519:0:0:0,-4.21442,-10 0/0:16.1524:2:2:76:0:0:0,-0.60206,-7.22 0/0:34.2142:8:8:278:0:0:0,-2.40824,-10 0/0:22.173:4:4:152:0:0:0,-1.20412,-10 0/0:91.4095:27:27:1011:0:0:0,-8.12781,-10 0/0:99:37:37:1379:0:0:0,-10,-10 0/0:99:39:39:1458:0:0:0,-10,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:67.3275:19:19:720:0:0:0,-5.71957,-10 0/0:40.2348:10:10:380:0:0:0,-3.0103,-10 0/0:49.2657:13:13:468:0:0:0,-3.91339,-10 0/0:99:46:46:1713:0:0:0,-10,-10 0/0:58.2966:16:16:600:0:0:0,-4.81648,-10 0/0:97.4287:29:29:1065:0:0:0,-8.72987,-10 0/0:40.2348:10:10:380:0:0:0,-3.0103,-10 0/0:52.276:14:14:530:0:0:0,-4.21442,-10 0/0:76.3584:22:22:807:0:0:0,-6.62266,-10 0/0:76.3584:23:22:821:0:0:0,-6.62266,-10 0/0:85.3892:25:25:904:0:0:0,-7.52575,-10 0/0:52.276:14:14:515:0:0:0,-4.21442,-10 0/0:79.3687:23:23:855:0:0:0,-6.92369,-10 0/0:99:38:38:1410:0:0:0,-10,-10 0/0:31.2039:7:7:251:0:0:0,-2.10721,-10 0/0:58.2966:16:16:608:0:0:0,-4.81648,-10 0/0:64.5597:26:25:947:1:15:0,-4.91181,-10 0/0:61.3069:17:17:642:0:0:0,-5.11751,-10 0/0:73.3481:21:21:738:0:0:0,-6.32163,-10 0/0:28.1936:6:6:228:0:0:0,-1.80618,-10 0/0:43.2451:11:11:414:0:0:0,-3.31133,-10 0/0:73.3481:21:21:774:0:0:0,-6.32163,-10 0/0:55.2863:15:15:554:0:0:0,-4.51545,-10 0/0:70.3378:20:20:723:0:0:0,-6.0206,-10 0/0:73.3481:21:21:776:0:0:0,-6.32163,-10 0/0:46.2554:12:12:443:0:0:0,-3.61236,-10 0/0:49.2657:13:13:490:0:0:0,-3.91339,-10 0/0:99:44:44:1617:0:0:0,-10,-10 0/0:79.3687:23:23:872:0:0:0,-6.92369,-10 0/0:85.3892:25:25:940:0:0:0,-7.52575,-10 0/0:99:50:50:1845:0:0:0,-10,-10 0/0:99:39:39:1460:0:0:0,-10,-10 0/0:61.3069:17:17:646:0:0:0,-5.11751,-10 0/0:99:30:30:1101:0:0:0,-9.0309,-10 0/0:46.2554:13:12:456:0:0:0,-3.61236,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:46.2554:12:12:421:0:0:0,-3.61236,-10 0/0:34.2142:8:8:298:0:0:0,-2.40824,-10 0/0:99:40:40:1499:0:0:0,-10,-10 0/0:55.2863:15:15:555:0:0:0,-4.51545,-10 0/0:76.3584:22:22:792:0:0:0,-6.62266,-10 0/0:67.3275:19:19:688:0:0:0,-5.71957,-10 0/0:76.3584:22:22:819:0:0:0,-6.62266,-10 0/0:43.2451:11:11:405:0:0:0,-3.31133,-10 0/0:94.4193:28:28:1062:0:0:0,-8.42884,-10 0/0:58.2966:16:16:603:0:0:0,-4.81648,-10 0/0:99:40:40:1415:0:0:0,-10,-10 0/0:73.3481:21:21:793:0:0:0,-6.32163,-10 0/0:64.3172:18:18:678:0:0:0,-5.41854,-10 0/0:99:37:37:1338:0:0:0,-10,-10 0/0:82.379:24:24:900:0:0:0,-7.22472,-10 0/0:34.2142:8:8:304:0:0:0,-2.40824,-10 0/0:99:33:33:1203:0:0:0,-9.93399,-10 0/0:43.2451:11:11:395:0:0:0,-3.31133,-10 0/0:73.3481:21:21:783:0:0:0,-6.32163,-10 0/0:99:39:39:1479:0:0:0,-10,-10 0/0:73.3481:21:21:794:0:0:0,-6.32163,-10 0/1:1.14418:18:0:0:18:624:-10,-5.41854,0 0/1:99:25:10:356:15:548:-10,0,-10 0/0:21.8498:19:18:678:1:38:0,-0.640816,-10 0/0:43.2451:11:11:380:0:0:0,-3.31133,-10 0/0:64.3172:18:18:684:0:0:0,-5.41854,-10 0/0:16.1524:2:2:76:0:0:0,-0.60206,-7.22 0/0:61.3069:17:17:633:0:0:0,-5.11751,-10 0/0:99:41:41:1547:0:0:0,-10,-10 0/0:88.3994:26:26:980:0:0:0,-7.82678,-10 0/0:88.3994:26:26:983:0:0:0,-7.82678,-10 0/0:67.3275:19:19:671:0:0:0,-5.71957,-10 0/0:64.3172:18:18:646:0:0:0,-5.41854,-10 0/0:31.2039:7:7:240:0:0:0,-2.10721,-10 0/0:64.3172:18:18:658:0:0:0,-5.41854,-10 0/0:52.276:14:14:520:0:0:0,-4.21442,-10 0/0:31.2039:7:7:263:0:0:0,-2.10721,-10 0/0:52.276:14:14:527:0:0:0,-4.21442,-10 0/0:64.3172:18:18:658:0:0:0,-5.41854,-10 0/0:58.2966:16:16:591:0:0:0,-4.81648,-10 scaffold_197 976665 . G A 3577.68 . AB=0.632653;ABP=17.989;AC=12;AF=0.0652174;AN=184;AO=134;CIGAR=1X;DP=1880;DPB=1880;DPRA=1.08431;EPP=3.59368;EPPR=3.2206;GTI=2;LEN=1;MEANALT=1;MQM=59.7612;MQMR=59.9043;NS=92;NUMALT=1;ODDS=1.54306;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4858;QR=64173;RO=1745;RPP=260.281;RPPR=3680.15;RUN=1;SAF=60;SAP=6.18648;SAR=74;SRF=866;SRP=3.2206;SRR=879;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:43.0031:18:17:610:1:16:0,-2.56327,-10 0/0:41.0991:9:9:342:0:0:0,-2.70927,-10 0/0:71.2021:19:19:722:0:0:0,-5.71957,-10 0/0:50.13:12:12:417:0:0:0,-3.61236,-10 0/0:62.1712:16:16:563:0:0:0,-4.81648,-10 0/0:38.0888:8:8:303:0:0:0,-2.40824,-10 0/0:99:33:32:1189:0:0:0,-9.63296,-10 0/0:71.2021:19:19:655:0:0:0,-5.71957,-10 0/0:56.1506:14:14:505:0:0:0,-4.21442,-10 0/0:17.0167:1:1:38:0:0:0,-0.30103,-3.8 0/0:38.0888:8:8:275:0:0:0,-2.40824,-10 0/0:26.0476:4:4:152:0:0:0,-1.20412,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:99:37:37:1377:0:0:0,-10,-10 0/0:99:37:37:1367:0:0:0,-10,-10 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:74.2124:20:20:756:0:0:0,-6.0206,-10 0/0:44.1094:10:10:378:0:0:0,-3.0103,-10 0/1:99:15:7:263:8:299:-10,0,-10 0/0:99:46:46:1692:0:0:0,-10,-10 0/0:62.1712:16:16:580:0:0:0,-4.81648,-10 0/0:99:29:29:1082:0:0:0,-8.72987,-10 0/0:44.1094:10:10:379:0:0:0,-3.0103,-10 0/0:56.1506:14:14:515:0:0:0,-4.21442,-10 0/0:80.233:22:22:806:0:0:0,-6.62266,-10 0/0:83.2431:23:23:830:0:0:0,-6.92369,-10 1/1:40.2672:24:0:0:24:816:-10,-7.22472,0 0/0:59.1609:15:15:559:0:0:0,-4.51545,-10 0/0:83.2431:23:23:811:0:0:0,-6.92369,-10 0/0:99:38:38:1396:0:0:0,-10,-10 0/0:35.0785:7:7:259:0:0:0,-2.10721,-10 1/1:16.1848:16:0:0:16:591:-10,-4.81648,0 0/0:92.2725:26:26:935:0:0:0,-7.82678,-10 0/0:65.1815:17:17:626:0:0:0,-5.11751,-10 0/0:77.2227:21:21:768:0:0:0,-6.32163,-10 0/0:32.0682:6:6:228:0:0:0,-1.80618,-10 0/0:47.1197:11:11:382:0:0:0,-3.31133,-10 0/0:74.2124:20:20:745:0:0:0,-6.0206,-10 0/0:59.1609:15:15:564:0:0:0,-4.51545,-10 0/0:74.2124:20:20:729:0:0:0,-6.0206,-10 0/1:99:23:8:304:15:551:-10,0,-10 0/0:50.13:12:12:447:0:0:0,-3.61236,-10 0/0:53.1403:13:13:491:0:0:0,-3.91339,-10 0/0:99:44:44:1657:0:0:0,-10,-10 0/0:83.2431:23:23:831:0:0:0,-6.92369,-10 0/0:89.2631:25:25:944:0:0:0,-7.52575,-10 0/0:99:50:49:1772:1:16:0,-10,-10 0/0:99:39:39:1456:0:0:0,-10,-10 0/0:65.1815:17:17:639:0:0:0,-5.11751,-10 0/0:99:30:30:1112:0:0:0,-9.0309,-10 0/0:50.13:12:12:432:0:0:0,-3.61236,-10 0/0:99:33:33:1248:0:0:0,-9.93399,-10 0/1:0.782222:13:0:0:13:477:-10,-3.91339,0 0/0:38.0888:8:8:301:0:0:0,-2.40824,-10 0/0:99:41:41:1486:0:0:0,-10,-10 0/0:59.1609:15:15:534:0:0:0,-4.51545,-10 0/0:80.233:22:22:828:0:0:0,-6.62266,-10 0/0:68.1918:18:18:660:0:0:0,-5.41854,-10 0/0:80.233:22:22:796:0:0:0,-6.62266,-10 0/0:47.1197:11:11:396:0:0:0,-3.31133,-10 1/1:55.3187:29:0:0:29:1097:-10,-8.72987,0 0/0:62.1712:16:16:608:0:0:0,-4.81648,-10 0/0:99:40:40:1457:0:0:0,-10,-10 0/1:99:21:11:416:10:380:-10,0,-10 0/0:68.1918:18:18:675:0:0:0,-5.41854,-10 0/0:99:36:36:1302:0:0:0,-10,-10 0/0:80.233:22:22:805:0:0:0,-6.62266,-10 0/1:0.0224273:8:0:0:8:296:-10,-2.40824,0 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:47.1197:11:11:406:0:0:0,-3.31133,-10 0/0:77.2227:21:21:772:0:0:0,-6.32163,-10 0/0:99:39:39:1442:0:0:0,-10,-10 0/0:77.2227:21:21:740:0:0:0,-6.32163,-10 0/0:68.1918:18:18:656:0:0:0,-5.41854,-10 0/0:89.2631:25:25:899:0:0:0,-7.52575,-10 0/0:71.2021:19:19:688:0:0:0,-5.71957,-10 0/0:47.1197:11:11:391:0:0:0,-3.31133,-10 0/0:71.2021:19:19:719:0:0:0,-5.71957,-10 0/0:20.027:2:2:75:0:0:0,-0.60206,-7.125 0/0:65.1815:17:17:642:0:0:0,-5.11751,-10 0/0:99:41:41:1523:0:0:0,-10,-10 0/0:71.1873:28:27:1023:1:16:0,-5.38168,-10 0/0:92.2725:26:26:980:0:0:0,-7.82678,-10 0/0:77.2227:21:21:766:0:0:0,-6.32163,-10 0/1:99:18:10:347:8:303:-10,0,-10 0/0:35.0785:7:7:256:0:0:0,-2.10721,-10 0/0:68.1918:18:18:659:0:0:0,-5.41854,-10 0/0:56.1506:14:14:509:0:0:0,-4.21442,-10 0/0:35.0785:7:7:262:0:0:0,-2.10721,-10 0/0:50.13:12:12:447:0:0:0,-3.61236,-10 0/0:65.1815:17:17:609:0:0:0,-5.11751,-10 0/0:62.1712:16:16:581:0:0:0,-4.81648,-10 scaffold_197 1298936 . C G 2098.49 . AB=0.547009;ABP=5.25601;AC=10;AF=0.0543478;AN=184;AO=80;CIGAR=1X;DP=1314;DPB=1314;DPRA=1.03857;EPP=176.728;EPPR=2665.26;GTI=1;LEN=1;MEANALT=1;MQM=59.9375;MQMR=59.9498;NS=92;NUMALT=1;ODDS=0.224576;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2981;QR=45368;RO=1234;RPP=5.72464;RPPR=7.76853;RUN=1;SAF=45;SAP=5.72464;SAR=35;SRF=589;SRP=8.52873;SRR=645;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.2839:10:10:374:0:0:0,-3.0103,-10 0/1:1.65933:10:0:0:10:376:-10,-3.0103,0 0/1:99:14:6:194:8:281:-10,0,-10 0/0:33.2324:5:5:181:0:0:0,-1.50515,-10 0/0:54.3045:12:12:426:0:0:0,-3.61236,-10 0/0:39.253:7:7:266:0:0:0,-2.10721,-10 0/0:84.4075:22:22:806:0:0:0,-6.62266,-10 0/0:75.3766:19:19:696:0:0:0,-5.71957,-10 0/0:39.253:7:7:266:0:0:0,-2.10721,-10 0/0:36.2427:6:6:226:0:0:0,-1.80618,-10 0/0:33.2324:5:5:186:0:0:0,-1.50515,-10 0/0:33.2324:5:5:168:0:0:0,-1.50515,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:93.438:25:25:946:0:0:0,-7.52575,-10 0/0:90.4279:24:24:887:0:0:0,-7.22472,-10 0/0:63.3354:15:15:547:0:0:0,-4.51545,-10 0/0:81.3972:21:21:756:0:0:0,-6.32163,-10 0/0:30.2221:4:4:152:0:0:0,-1.20412,-10 0/0:63.3354:15:15:568:0:0:0,-4.51545,-10 0/0:90.4279:24:24:885:0:0:0,-7.22472,-10 0/0:60.3251:14:14:476:0:0:0,-4.21442,-10 0/1:99:20:14:527:6:224:-10,0,-10 0/0:39.253:7:7:260:0:0:0,-2.10721,-10 0/0:54.3045:12:12:443:0:0:0,-3.61236,-10 0/0:42.2633:8:8:303:0:0:0,-2.40824,-10 0/0:93.438:25:25:899:0:0:0,-7.52575,-10 0/0:66.3457:16:16:592:0:0:0,-4.81648,-10 0/0:42.2633:8:8:304:0:0:0,-2.40824,-10 0/0:48.2839:10:10:376:0:0:0,-3.0103,-10 0/0:75.3766:19:19:704:0:0:0,-5.71957,-10 0/0:42.2633:8:8:300:0:0:0,-2.40824,-10 0/0:45.2736:9:9:320:0:0:0,-2.70927,-10 0/0:60.3251:14:14:528:0:0:0,-4.21442,-10 0/0:39.253:7:7:264:0:0:0,-2.10721,-10 0/0:57.3148:13:13:484:0:0:0,-3.91339,-10 0/0:33.2324:5:5:185:0:0:0,-1.50515,-10 0/0:66.3457:16:16:604:0:0:0,-4.81648,-10 0/0:84.4075:22:22:796:0:0:0,-6.62266,-10 0/0:33.2324:5:5:189:0:0:0,-1.50515,-10 0/0:51.2942:11:11:389:0:0:0,-3.31133,-10 0/0:96.4479:26:26:983:0:0:0,-7.82678,-10 1/1:5.54434:16:0:0:16:606:-10,-4.81648,0 0/0:36.2427:6:6:228:0:0:0,-1.80618,-10 0/0:87.4177:23:23:860:0:0:0,-6.92369,-10 0/0:66.3457:16:16:607:0:0:0,-4.81648,-10 0/0:78.3869:20:20:743:0:0:0,-6.0206,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/0:66.3457:16:16:603:0:0:0,-4.81648,-10 0/0:48.2839:10:10:358:0:0:0,-3.0103,-10 0/0:90.4279:24:24:904:0:0:0,-7.22472,-10 0/0:72.3663:18:18:684:0:0:0,-5.41854,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:42.2633:8:8:281:0:0:0,-2.40824,-10 0/0:36.2427:6:6:227:0:0:0,-1.80618,-10 0/0:87.4177:23:23:857:0:0:0,-6.92369,-10 0/0:45.2736:9:9:319:0:0:0,-2.70927,-10 0/0:87.4177:23:23:804:0:0:0,-6.92369,-10 0/0:51.2942:11:11:391:0:0:0,-3.31133,-10 0/0:60.3251:14:14:512:0:0:0,-4.21442,-10 0/0:39.253:7:7:249:0:0:0,-2.10721,-10 0/0:75.3766:19:19:691:0:0:0,-5.71957,-10 0/0:57.3148:13:13:493:0:0:0,-3.91339,-10 0/0:87.4177:23:23:856:0:0:0,-6.92369,-10 0/0:78.3869:20:20:750:0:0:0,-6.0206,-10 0/0:36.2427:6:6:226:0:0:0,-1.80618,-10 0/0:93.438:25:25:920:0:0:0,-7.52575,-10 0/0:69.356:17:17:632:0:0:0,-5.11751,-10 0/0:51.2942:11:11:414:0:0:0,-3.31133,-10 0/0:96.4479:26:26:912:0:0:0,-7.82678,-10 0/0:60.3251:14:14:521:0:0:0,-4.21442,-10 0/0:54.3045:12:12:456:0:0:0,-3.61236,-10 0/0:87.4177:23:23:828:0:0:0,-6.92369,-10 0/0:48.2839:10:10:376:0:0:0,-3.0103,-10 0/0:42.2633:8:8:280:0:0:0,-2.40824,-10 0/0:81.3972:21:21:777:0:0:0,-6.32163,-10 0/0:39.253:7:7:265:0:0:0,-2.10721,-10 0/0:51.2942:11:11:397:0:0:0,-3.31133,-10 0/0:39.253:7:7:244:0:0:0,-2.10721,-10 0/0:36.2427:6:6:228:0:0:0,-1.80618,-10 0/0:51.2942:11:11:388:0:0:0,-3.31133,-10 0/0:81.3972:21:21:759:0:0:0,-6.32163,-10 0/0:57.3148:13:13:485:0:0:0,-3.91339,-10 0/1:99:13:5:185:8:303:-10,0,-10 0/1:99:13:6:205:7:257:-10,0,-10 0/0:54.3045:12:12:454:0:0:0,-3.61236,-10 0/0:39.253:7:7:257:0:0:0,-2.10721,-10 0/0:51.2942:11:11:377:0:0:0,-3.31133,-10 0/0:54.3045:12:12:426:0:0:0,-3.61236,-10 0/1:99:7:3:114:4:152:-10,0,-10 0/1:99:23:10:370:13:485:-10,0,-10 0/1:99:17:9:337:8:297:-10,0,-10 0/0:63.3354:15:15:561:0:0:0,-4.51545,-10 scaffold_197 1298951 . C T 44.4207 . AB=0.4;ABP=3.87889;AC=1;AF=0.00543478;AN=184;AO=5;CIGAR=1X;DP=1303;DPB=1303;DPRA=0.808594;EPP=13.8677;EPPR=6.55023;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9484;NS=92;NUMALT=1;ODDS=10.2282;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=167;QR=47369;RO=1298;RPP=13.8677;RPPR=2761.11;RUN=1;SAF=5;SAP=13.8677;SAR=0;SRF=619;SRP=9.03287;SRR=679;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.6092:10:10:368:0:0:0,-3.0103,-10 0/0:74.6092:10:10:354:0:0:0,-3.0103,-10 0/0:86.6503:14:14:465:0:0:0,-4.21442,-10 0/0:56.5474:4:4:152:0:0:0,-1.20412,-10 0/0:80.6297:12:12:434:0:0:0,-3.61236,-10 0/0:62.568:6:6:228:0:0:0,-1.80618,-10 0/0:99:22:22:801:0:0:0,-6.62266,-10 0/0:99:19:19:682:0:0:0,-5.71957,-10 0/0:65.5783:7:7:266:0:0:0,-2.10721,-10 0/0:62.568:6:6:223:0:0:0,-1.80618,-10 0/0:59.5577:5:5:181:0:0:0,-1.50515,-10 0/0:59.5577:5:5:183:0:0:0,-1.50515,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:99:25:25:939:0:0:0,-7.52575,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/0:89.6605:15:15:569:0:0:0,-4.51545,-10 0/0:99:21:21:759:0:0:0,-6.32163,-10 0/0:56.5474:4:4:152:0:0:0,-1.20412,-10 0/0:89.6605:15:15:544:0:0:0,-4.51545,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:86.6503:14:14:499:0:0:0,-4.21442,-10 0/0:99:20:20:723:0:0:0,-6.0206,-10 0/0:65.5783:7:7:263:0:0:0,-2.10721,-10 0/0:80.6297:12:12:431:0:0:0,-3.61236,-10 0/0:68.5886:8:8:287:0:0:0,-2.40824,-10 0/0:99:25:25:925:0:0:0,-7.52575,-10 0/0:92.6707:16:16:551:0:0:0,-4.81648,-10 0/0:68.5886:8:8:304:0:0:0,-2.40824,-10 0/0:74.6092:10:10:357:0:0:0,-3.0103,-10 0/0:99:19:19:686:0:0:0,-5.71957,-10 0/0:68.5886:8:8:274:0:0:0,-2.40824,-10 0/0:71.5989:9:9:298:0:0:0,-2.70927,-10 0/0:86.6503:14:14:531:0:0:0,-4.21442,-10 0/0:62.568:6:6:228:0:0:0,-1.80618,-10 0/0:62.0097:13:12:446:1:15:0,-1.29945,-10 0/0:59.5577:5:5:170:0:0:0,-1.50515,-10 0/0:92.6707:16:16:594:0:0:0,-4.81648,-10 0/0:99:22:22:793:0:0:0,-6.62266,-10 0/0:59.5577:5:5:190:0:0:0,-1.50515,-10 0/0:77.6195:11:11:401:0:0:0,-3.31133,-10 0/0:99:25:25:945:0:0:0,-7.52575,-10 0/0:92.6707:16:16:567:0:0:0,-4.81648,-10 0/0:62.568:6:6:227:0:0:0,-1.80618,-10 0/0:99:23:23:862:0:0:0,-6.92369,-10 0/0:92.6707:16:16:576:0:0:0,-4.81648,-10 0/0:99:20:20:738:0:0:0,-6.0206,-10 0/0:99:30:30:1081:0:0:0,-9.0309,-10 0/0:89.6605:15:15:560:0:0:0,-4.51545,-10 0/0:74.6092:10:10:358:0:0:0,-3.0103,-10 0/0:99:24:24:889:0:0:0,-7.22472,-10 0/0:98.6905:18:18:676:0:0:0,-5.41854,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:68.5886:8:8:300:0:0:0,-2.40824,-10 0/0:59.5577:5:5:190:0:0:0,-1.50515,-10 0/0:99:23:23:854:0:0:0,-6.92369,-10 0/0:71.5989:9:9:319:0:0:0,-2.70927,-10 0/0:99:23:23:834:0:0:0,-6.92369,-10 0/0:77.6195:11:11:377:0:0:0,-3.31133,-10 0/0:86.6503:14:14:514:0:0:0,-4.21442,-10 0/0:65.5783:7:7:244:0:0:0,-2.10721,-10 0/0:99:19:19:706:0:0:0,-5.71957,-10 0/0:83.64:13:13:493:0:0:0,-3.91339,-10 0/0:99:23:23:868:0:0:0,-6.92369,-10 0/0:99:20:20:732:0:0:0,-6.0206,-10 0/0:62.568:6:6:228:0:0:0,-1.80618,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 0/0:92.6707:16:16:575:0:0:0,-4.81648,-10 0/0:77.6195:11:11:403:0:0:0,-3.31133,-10 0/0:99:26:26:907:0:0:0,-7.82678,-10 0/0:83.64:13:13:464:0:0:0,-3.91339,-10 0/0:77.6195:11:11:414:0:0:0,-3.31133,-10 0/0:99:23:23:821:0:0:0,-6.92369,-10 0/1:44.4207:10:6:227:4:152:-10,0,-10 0/0:68.5886:8:8:282:0:0:0,-2.40824,-10 0/0:99:19:19:717:0:0:0,-5.71957,-10 0/0:65.5783:7:7:263:0:0:0,-2.10721,-10 0/0:77.6195:11:11:374:0:0:0,-3.31133,-10 0/0:65.5783:7:7:261:0:0:0,-2.10721,-10 0/0:62.568:6:6:223:0:0:0,-1.80618,-10 0/0:77.6195:11:11:357:0:0:0,-3.31133,-10 0/0:99:21:21:784:0:0:0,-6.32163,-10 0/0:83.64:13:13:486:0:0:0,-3.91339,-10 0/0:83.64:13:13:490:0:0:0,-3.91339,-10 0/0:83.64:13:13:466:0:0:0,-3.91339,-10 0/0:80.6297:12:12:450:0:0:0,-3.61236,-10 0/0:65.5783:7:7:243:0:0:0,-2.10721,-10 0/0:77.6195:11:11:401:0:0:0,-3.31133,-10 0/0:80.6297:12:12:410:0:0:0,-3.61236,-10 0/0:65.5783:7:7:266:0:0:0,-2.10721,-10 0/0:99:23:23:825:0:0:0,-6.92369,-10 0/0:95.6807:17:17:626:0:0:0,-5.11751,-10 0/0:89.6605:15:15:564:0:0:0,-4.51545,-10 scaffold_197 1393386 . A G 167.135 . AB=0.555556;ABP=3.49285;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1589;DPB=1589;DPRA=1.31153;EPP=4.78696;EPPR=158.563;GTI=0;LEN=1;MEANALT=1;MQM=58.2727;MQMR=59.1275;NS=92;NUMALT=1;ODDS=8.99857;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=336;QR=54997;RO=1576;RPP=26.8965;RPPR=3416.57;RUN=1;SAF=4;SAP=4.78696;SAR=7;SRF=619;SRP=160.42;SRR=957;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.216:15:15:528:0:0:0,-4.51545,-10 0/0:72.1954:13:13:469:0:0:0,-3.91339,-10 0/0:90.256:19:19:645:0:0:0,-5.71957,-10 0/0:42.0924:3:3:112:0:0:0,-0.90309,-10 0/0:96.2733:21:21:766:0:0:0,-6.32163,-10 0/0:66.1748:12:11:385:0:0:0,-3.31133,-10 0/0:99:39:39:1317:0:0:0,-10,-10 0/0:99:29:29:1038:0:0:0,-8.72987,-10 0/0:54.1336:7:7:196:0:0:0,-2.10721,-10 0/0:42.0924:3:3:114:0:0:0,-0.90309,-10 0/0:48.113:5:5:190:0:0:0,-1.50515,-10 0/0:54.1336:7:7:264:0:0:0,-2.10721,-10 0/0:99:25:25:834:0:0:0,-7.52575,-10 0/0:99:26:26:891:0:0:0,-7.82678,-10 0/0:99:24:24:859:0:0:0,-7.22472,-10 0/0:99:24:24:817:0:0:0,-7.22472,-10 0/0:99:28:28:967:0:0:0,-8.42884,-10 0/0:81.2261:16:16:604:0:0:0,-4.81648,-10 0/0:99:28:27:875:0:0:0,-8.12781,-10 0/0:99:27:27:918:0:0:0,-8.12781,-10 0/0:66.1748:11:11:385:0:0:0,-3.31133,-10 0/0:99:29:29:1017:0:0:0,-8.72987,-10 0/0:57.1439:8:8:302:0:0:0,-2.40824,-10 0/0:93.2673:20:20:715:0:0:0,-6.0206,-10 0/0:93.2673:20:20:751:0:0:0,-6.0206,-10 0/0:75.2057:14:14:466:0:0:0,-4.21442,-10 0/0:84.2365:17:17:614:0:0:0,-5.11751,-10 0/0:66.1748:11:11:348:0:0:0,-3.31133,-10 0/0:90.256:19:19:612:0:0:0,-5.71957,-10 0/0:99:30:30:1051:0:0:0,-9.0309,-10 0/0:39.0821:2:2:30:0:0:0,-0.60206,-2.85 0/0:48.113:5:5:186:0:0:0,-1.50515,-10 0/0:81.2261:16:16:576:0:0:0,-4.81648,-10 0/0:81.2261:16:16:546:0:0:0,-4.81648,-10 0/0:78.216:15:15:518:0:0:0,-4.51545,-10 0/0:54.1336:7:7:261:0:0:0,-2.10721,-10 0/0:51.1233:6:6:204:0:0:0,-1.80618,-10 0/0:87.2463:18:18:590:0:0:0,-5.41854,-10 0/0:78.216:15:15:528:0:0:0,-4.51545,-10 0/0:78.216:15:15:482:0:0:0,-4.51545,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:69.1851:12:12:382:0:0:0,-3.61236,-10 0/0:72.1954:13:13:449:0:0:0,-3.91339,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:84.2365:17:17:583:0:0:0,-5.11751,-10 0/0:75.2057:14:14:485:0:0:0,-4.21442,-10 0/0:99:42:42:1408:0:0:0,-10,-10 0/0:99:22:22:794:0:0:0,-6.62266,-10 0/0:60.1542:9:9:303:0:0:0,-2.70927,-10 0/0:99:28:28:1008:0:0:0,-8.42884,-10 0/0:78.216:15:15:495:0:0:0,-4.51545,-10 0/0:99:29:29:1034:0:0:0,-8.72987,-10 0/0:63.1645:10:10:353:0:0:0,-3.0103,-10 0/0:72.1954:13:13:463:0:0:0,-3.91339,-10 0/0:90.256:19:19:613:0:0:0,-5.71957,-10 0/0:63.1645:10:10:350:0:0:0,-3.0103,-10 0/0:99:22:22:805:0:0:0,-6.62266,-10 0/0:54.1336:7:7:250:0:0:0,-2.10721,-10 0/0:69.1851:12:12:403:0:0:0,-3.61236,-10 0/0:69.1851:12:12:421:0:0:0,-3.61236,-10 0/0:99:24:24:810:0:0:0,-7.22472,-10 0/0:84.2365:17:17:555:0:0:0,-5.11751,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:75.2057:14:14:522:0:0:0,-4.21442,-10 0/0:66.1748:11:11:345:0:0:0,-3.31133,-10 0/0:99:27:27:956:0:0:0,-8.12781,-10 0/0:78.216:15:15:527:0:0:0,-4.51545,-10 0/0:90.256:19:19:689:0:0:0,-5.71957,-10 0/0:93.2673:20:20:688:0:0:0,-6.0206,-10 0/0:69.1851:12:12:432:0:0:0,-3.61236,-10 0/0:84.2365:17:17:632:0:0:0,-5.11751,-10 0/0:99:27:27:924:0:0:0,-8.12781,-10 0/0:93.2673:20:20:729:0:0:0,-6.0206,-10 0/0:63.1645:10:10:312:0:0:0,-3.0103,-10 0/1:99:18:8:233:10:303:-10,0,-10 0/0:60.1542:9:9:310:0:0:0,-2.70927,-10 0/0:81.2261:16:16:545:0:0:0,-4.81648,-10 0/0:63.1645:10:10:336:0:0:0,-3.0103,-10 0/0:60.1542:9:9:320:0:0:0,-2.70927,-10 0/0:75.2057:14:14:485:0:0:0,-4.21442,-10 0/0:99:42:42:1541:0:0:0,-10,-10 0/0:84.2365:17:17:611:0:0:0,-5.11751,-10 0/0:99:33:33:1167:0:0:0,-9.93399,-10 0/0:84.2365:17:17:610:0:0:0,-5.11751,-10 0/0:65.3162:27:26:920:1:33:0,-3.39645,-10 0/0:45.1027:4:4:139:0:0:0,-1.20412,-10 0/0:57.1439:8:8:257:0:0:0,-2.40824,-10 0/0:66.1748:11:11:404:0:0:0,-3.31133,-10 0/0:42.0924:3:3:113:0:0:0,-0.90309,-10 0/0:90.256:19:19:673:0:0:0,-5.71957,-10 0/0:99:22:22:815:0:0:0,-6.62266,-10 0/0:87.2463:18:18:618:0:0:0,-5.41854,-10 scaffold_197 1393398 . T C 2103.05 . AB=0.703704;ABP=22.4731;AC=6;AF=0.0326087;AN=184;AO=80;CIGAR=1X;DP=1583;DPB=1583;DPRA=1.40606;EPP=3.11887;EPPR=180.821;GTI=2;LEN=1;MEANALT=1;MQM=59.775;MQMR=59.135;NS=92;NUMALT=1;ODDS=1.02551;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2944;QR=47693;RO=1496;RPP=176.728;RPPR=3251.53;RUN=1;SAF=39;SAP=3.11887;SAR=41;SRF=573;SRP=180.821;SRR=923;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.2222:15:15:495:0:0:0,-4.51545,-10 0/0:42.2016:13:13:403:0:0:0,-3.91339,-10 0/0:57.2531:18:18:577:0:0:0,-5.41854,-10 0/0:12.0986:3:3:92:0:0:0,-0.90309,-8.58667 0/0:66.284:21:21:709:0:0:0,-6.32163,-10 0/0:39.1913:12:12:363:0:0:0,-3.61236,-10 0/0:99:39:39:1198:0:0:0,-10,-10 0/0:90.3659:29:29:995:0:0:0,-8.72987,-10 0/0:24.1398:7:7:181:0:0:0,-2.10721,-10 0/0:12.0986:3:3:114:0:0:0,-0.90309,-10 0/0:18.1192:5:5:190:0:0:0,-1.50515,-10 0/0:24.1398:7:7:226:0:0:0,-2.10721,-10 0/0:78.3252:25:25:814:0:0:0,-7.52575,-10 0/0:81.3355:26:26:874:0:0:0,-7.82678,-10 0/0:75.3149:24:24:702:0:0:0,-7.22472,-10 0/0:72.3046:24:23:691:0:0:0,-6.92369,-10 0/0:87.3559:28:28:933:0:0:0,-8.42884,-10 0/0:51.2325:16:16:539:0:0:0,-4.81648,-10 0/0:87.3559:28:28:833:0:0:0,-8.42884,-10 0/0:84.3457:27:27:942:0:0:0,-8.12781,-10 0/0:36.181:11:11:373:0:0:0,-3.31133,-10 0/0:87.3559:28:28:914:0:0:0,-8.42884,-10 0/0:27.1501:8:8:296:0:0:0,-2.40824,-10 0/0:63.2737:20:20:639:0:0:0,-6.0206,-10 0/0:63.2737:20:20:713:0:0:0,-6.0206,-10 0/0:45.2119:14:14:481:0:0:0,-4.21442,-10 0/0:54.2428:17:17:539:0:0:0,-5.11751,-10 0/0:36.181:11:11:347:0:0:0,-3.31133,-10 0/0:60.2634:19:19:553:0:0:0,-5.71957,-10 0/0:93.3757:30:30:964:0:0:0,-9.0309,-10 0/1:0.779303:2:2:44:0:0:0,-0.60206,-4.18 0/0:18.1192:5:5:180:0:0:0,-1.50515,-10 0/0:51.2325:16:16:552:0:0:0,-4.81648,-10 0/0:51.2325:16:16:542:0:0:0,-4.81648,-10 0/0:48.2222:15:15:532:0:0:0,-4.51545,-10 0/0:24.1398:7:7:256:0:0:0,-2.10721,-10 0/0:21.1295:6:6:217:0:0:0,-1.80618,-10 0/0:57.2531:18:18:519:0:0:0,-5.41854,-10 0/0:45.2119:14:14:464:0:0:0,-4.21442,-10 0/0:48.2222:15:15:484:0:0:0,-4.51545,-10 0/0:84.3457:27:27:778:0:0:0,-8.12781,-10 0/0:36.181:12:11:304:0:0:0,-3.31133,-10 0/0:42.2016:13:13:397:0:0:0,-3.91339,-10 0/1:99:28:6:161:22:817:-10,0,-10 0/0:54.2428:17:17:488:0:0:0,-5.11751,-10 0/0:45.2119:14:14:433:0:0:0,-4.21442,-10 0/0:99:42:41:1258:0:0:0,-10,-10 0/0:69.2943:22:22:607:0:0:0,-6.62266,-10 0/0:27.1501:9:8:265:0:0:0,-2.40824,-10 0/0:87.3559:28:28:947:0:0:0,-8.42884,-10 0/0:48.2222:15:15:463:0:0:0,-4.51545,-10 0/0:90.3659:29:29:902:0:0:0,-8.72987,-10 0/0:30.1604:9:9:311:0:0:0,-2.70927,-10 0/0:42.2016:13:13:404:0:0:0,-3.91339,-10 0/0:60.2634:19:19:562:0:0:0,-5.71957,-10 0/0:33.1707:10:10:322:0:0:0,-3.0103,-10 0/0:69.2943:22:22:698:0:0:0,-6.62266,-10 0/0:24.1398:7:7:223:0:0:0,-2.10721,-10 0/0:39.1913:12:12:402:0:0:0,-3.61236,-10 0/0:36.181:12:11:330:0:0:0,-3.31133,-10 0/0:75.3149:24:24:681:0:0:0,-7.22472,-10 0/0:54.2428:17:17:533:0:0:0,-5.11751,-10 0/0:99:33:33:1019:0:0:0,-9.93399,-10 0/0:45.2119:14:14:499:0:0:0,-4.21442,-10 0/0:36.181:11:11:339:0:0:0,-3.31133,-10 0/0:84.3457:27:27:854:0:0:0,-8.12781,-10 0/0:45.2119:14:14:459:0:0:0,-4.21442,-10 0/0:60.2634:19:19:682:0:0:0,-5.71957,-10 0/0:57.2531:20:18:573:0:0:0,-5.41854,-10 0/0:39.1913:12:12:386:0:0:0,-3.61236,-10 0/0:54.2428:17:17:533:0:0:0,-5.11751,-10 0/0:84.3457:27:27:829:0:0:0,-8.12781,-10 0/0:63.2737:20:20:673:0:0:0,-6.0206,-10 0/0:30.1604:9:9:232:0:0:0,-2.70927,-10 0/0:57.2531:18:18:564:0:0:0,-5.41854,-10 0/0:30.1604:9:9:288:0:0:0,-2.70927,-10 0/0:51.2325:16:16:539:0:0:0,-4.81648,-10 0/0:33.1707:10:10:330:0:0:0,-3.0103,-10 0/1:0.4379:9:0:0:9:338:-10,-2.70927,0 0/0:45.2119:14:14:495:0:0:0,-4.21442,-10 1/1:99:42:0:0:42:1529:-10,-10,0 0/1:99:17:10:338:7:260:-10,0,-10 0/0:99:33:33:1046:0:0:0,-9.93399,-10 0/0:54.2428:17:17:508:0:0:0,-5.11751,-10 0/0:84.3457:27:27:827:0:0:0,-8.12781,-10 0/0:15.1089:4:4:108:0:0:0,-1.20412,-9.99 0/0:27.1501:8:8:248:0:0:0,-2.40824,-10 0/0:36.181:11:11:351:0:0:0,-3.31133,-10 0/0:12.0986:3:3:103:0:0:0,-0.90309,-9.61333 0/0:60.2634:19:19:604:0:0:0,-5.71957,-10 0/0:69.2943:22:22:742:0:0:0,-6.62266,-10 0/0:57.2531:18:18:575:0:0:0,-5.41854,-10 scaffold_197 1539867 . G A 241.527 . AB=0.526316;ABP=3.12459;AC=1;AF=0.00543478;AN=184;AO=12;CIGAR=1X;DP=1625;DPB=1625;DPRA=0.980716;EPP=3.73412;EPPR=3.01165;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=6.15976;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=433;QR=59237;RO=1613;RPP=29.068;RPPR=3505.6;RUN=1;SAF=7;SAP=3.73412;SAR=5;SRF=807;SRP=3.01165;SRR=806;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.0534:10:10:333:0:0:0,-3.0103,-10 0/0:55.0225:7:7:266:0:0:0,-2.10721,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:61.0431:9:9:342:0:0:0,-2.70927,-10 0/0:70.074:12:12:423:0:0:0,-3.61236,-10 0/0:61.0431:9:9:331:0:0:0,-2.70927,-10 0/0:97.1634:21:21:771:0:0:0,-6.32163,-10 0/0:91.1466:19:19:688:0:0:0,-5.71957,-10 0/0:82.1151:16:16:604:0:0:0,-4.81648,-10 0/0:45.9916:4:4:152:0:0:0,-1.20412,-10 0/0:67.0637:11:11:415:0:0:0,-3.31133,-10 0/0:58.0328:8:8:304:0:0:0,-2.40824,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:99:27:27:1004:0:0:0,-8.12781,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:73.0843:13:13:485:0:0:0,-3.91339,-10 0/0:97.1634:21:21:784:0:0:0,-6.32163,-10 0/0:61.0431:9:9:338:0:0:0,-2.70927,-10 0/0:99:23:23:810:0:0:0,-6.92369,-10 0/0:99:27:27:962:0:0:0,-8.12781,-10 0/0:58.0328:8:8:287:0:0:0,-2.40824,-10 0/0:99:27:27:988:0:0:0,-8.12781,-10 0/0:64.0534:10:10:378:0:0:0,-3.0103,-10 0/0:76.0946:14:14:532:0:0:0,-4.21442,-10 0/0:99:22:22:786:0:0:0,-6.62266,-10 0/0:79.1049:15:15:561:0:0:0,-4.51545,-10 0/0:65.4095:19:18:643:1:16:0,-2.84082,-10 0/0:67.0637:11:11:413:0:0:0,-3.31133,-10 0/0:73.0843:13:13:482:0:0:0,-3.91339,-10 0/0:99:47:47:1700:0:0:0,-10,-10 0/0:58.0328:8:8:303:0:0:0,-2.40824,-10 0/0:45.9916:4:4:152:0:0:0,-1.20412,-10 0/0:85.1253:17:17:599:0:0:0,-5.11751,-10 0/0:67.0637:11:11:395:0:0:0,-3.31133,-10 0/0:73.0843:13:13:479:0:0:0,-3.91339,-10 0/0:52.0122:6:6:225:0:0:0,-1.80618,-10 0/0:88.1354:18:18:645:0:0:0,-5.41854,-10 0/0:99:24:24:875:0:0:0,-7.22472,-10 0/0:99:23:23:868:0:0:0,-6.92369,-10 0/0:67.0637:11:11:393:0:0:0,-3.31133,-10 0/0:91.1466:19:19:720:0:0:0,-5.71957,-10 0/0:82.1151:16:16:603:0:0:0,-4.81648,-10 0/0:79.1049:15:15:568:0:0:0,-4.51545,-10 0/0:99:26:26:980:0:0:0,-7.82678,-10 0/0:94.1573:20:20:732:0:0:0,-6.0206,-10 0/0:61.0431:9:9:312:0:0:0,-2.70927,-10 0/0:99:41:41:1532:0:0:0,-10,-10 0/0:61.0431:9:9:325:0:0:0,-2.70927,-10 0/0:79.1049:15:15:561:0:0:0,-4.51545,-10 0/0:99:36:36:1326:0:0:0,-10,-10 0/0:76.0946:14:14:520:0:0:0,-4.21442,-10 0/0:99:36:36:1334:0:0:0,-10,-10 0/0:61.0431:9:9:336:0:0:0,-2.70927,-10 0/0:39.971:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:45:45:1663:0:0:0,-10,-10 0/0:85.1253:17:17:638:0:0:0,-5.11751,-10 0/0:99:26:26:957:0:0:0,-7.82678,-10 0/0:73.0843:13:13:463:0:0:0,-3.91339,-10 0/0:70.074:12:12:452:0:0:0,-3.61236,-10 0/0:58.0328:8:8:281:0:0:0,-2.40824,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:79.1049:15:15:550:0:0:0,-4.51545,-10 0/0:99:35:35:1250:0:0:0,-10,-10 0/0:88.1354:18:18:646:0:0:0,-5.41854,-10 0/0:97.1634:21:21:737:0:0:0,-6.32163,-10 0/0:99:22:22:829:0:0:0,-6.62266,-10 0/0:97.1634:21:21:764:0:0:0,-6.32163,-10 0/0:76.0946:14:14:532:0:0:0,-4.21442,-10 0/0:99:35:35:1258:0:0:0,-10,-10 0/0:70.074:12:12:434:0:0:0,-3.61236,-10 0/0:82.1151:16:16:556:0:0:0,-4.81648,-10 0/0:91.1466:19:19:664:0:0:0,-5.71957,-10 0/1:99:19:9:319:10:379:-10,0,-10 0/0:0.0091637:14:13:488:1:38:-0.731708,0,-10 0/0:99:32:32:1137:0:0:0,-9.63296,-10 0/0:73.0843:13:13:466:0:0:0,-3.91339,-10 0/0:79.1049:15:15:565:0:0:0,-4.51545,-10 0/0:55.0225:7:7:266:0:0:0,-2.10721,-10 0/0:52.0122:6:6:227:0:0:0,-1.80618,-10 0/0:82.1151:16:16:588:0:0:0,-4.81648,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:99:23:23:850:0:0:0,-6.92369,-10 0/0:99:29:29:1091:0:0:0,-8.72987,-10 0/0:91.1466:19:19:705:0:0:0,-5.71957,-10 0/0:42.9813:3:3:102:0:0:0,-0.90309,-9.52 0/0:79.1049:15:15:566:0:0:0,-4.51545,-10 0/0:67.0637:11:11:410:0:0:0,-3.31133,-10 0/0:52.0122:6:6:227:0:0:0,-1.80618,-10 0/0:79.1049:15:15:565:0:0:0,-4.51545,-10 0/0:94.1573:20:20:721:0:0:0,-6.0206,-10 0/0:82.1151:16:16:582:0:0:0,-4.81648,-10 scaffold_197 1539896 . A G 2700.81 . AB=0.47541;ABP=3.97144;AC=8;AF=0.0434783;AN=184;AO=103;CIGAR=1X;DP=1667;DPB=1667;DPRA=1.5435;EPP=3.03138;EPPR=14.2564;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.358158;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3689;QR=57688;RO=1564;RPP=209.637;RPPR=3185.52;RUN=1;SAF=54;SAP=3.53736;SAR=49;SRF=760;SRP=5.69826;SRR=804;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:32.9545:10:10:352:0:0:0,-3.0103,-10 0/0:23.9236:7:7:266:0:0:0,-2.10721,-10 0/0:84.1293:27:27:1026:0:0:0,-8.12781,-10 0/0:29.9442:9:9:340:0:0:0,-2.70927,-10 0/0:41.9854:13:13:440:0:0:0,-3.91339,-10 0/0:29.9442:9:9:332:0:0:0,-2.70927,-10 0/0:66.0678:21:21:764:0:0:0,-6.32163,-10 0/0:60.0472:19:19:667:0:0:0,-5.71957,-10 0/0:51.0163:16:16:601:0:0:0,-4.81648,-10 0/0:14.8927:4:4:151:0:0:0,-1.20412,-10 0/0:35.9648:11:11:386:0:0:0,-3.31133,-10 0/0:29.9442:9:9:319:0:0:0,-2.70927,-10 0/0:84.1293:27:27:1013:0:0:0,-8.12781,-10 0/0:90.1502:29:29:1096:0:0:0,-8.72987,-10 0/0:93.1585:30:30:1136:0:0:0,-9.0309,-10 0/0:44.9957:14:14:530:0:0:0,-4.21442,-10 0/0:75.0986:24:24:878:0:0:0,-7.22472,-10 0/0:32.9545:10:10:380:0:0:0,-3.0103,-10 0/0:72.0884:23:23:814:0:0:0,-6.92369,-10 0/0:84.1293:27:27:984:0:0:0,-8.12781,-10 0/0:29.9442:9:9:338:0:0:0,-2.70927,-10 0/0:87.1394:28:28:1017:0:0:0,-8.42884,-10 0/0:32.9545:10:10:351:0:0:0,-3.0103,-10 0/0:44.9957:14:14:530:0:0:0,-4.21442,-10 0/0:69.0781:22:22:831:0:0:0,-6.62266,-10 0/0:51.0163:16:16:585:0:0:0,-4.81648,-10 0/0:60.0472:19:19:691:0:0:0,-5.71957,-10 0/0:35.9648:11:11:396:0:0:0,-3.31133,-10 0/0:41.9854:13:13:494:0:0:0,-3.91339,-10 0/1:99:47:24:866:23:795:-10,0,-10 0/0:26.9339:8:8:281:0:0:0,-2.40824,-10 0/0:14.8927:4:4:151:0:0:0,-1.20412,-10 0/0:57.0369:18:18:655:0:0:0,-5.41854,-10 0/0:35.9648:11:11:413:0:0:0,-3.31133,-10 0/0:41.9854:13:13:486:0:0:0,-3.91339,-10 0/0:23.9236:7:7:256:0:0:0,-2.10721,-10 0/0:57.0369:18:18:679:0:0:0,-5.41854,-10 0/0:81.1193:26:26:932:0:0:0,-7.82678,-10 0/0:72.0884:23:23:856:0:0:0,-6.92369,-10 0/0:41.9854:13:13:492:0:0:0,-3.91339,-10 0/0:63.0575:20:20:752:0:0:0,-6.0206,-10 0/0:1.63186:16:15:570:1:38:-0.18764,0,-10 0/0:48.006:15:15:565:0:0:0,-4.51545,-10 0/0:90.1502:29:29:1070:0:0:0,-8.72987,-10 0/0:63.0575:20:20:715:0:0:0,-6.0206,-10 0/1:99:9:4:138:5:173:-10,0,-10 0/1:99:41:21:794:20:753:-10,0,-10 0/0:29.9442:9:9:340:0:0:0,-2.70927,-10 0/0:51.0163:16:16:545:0:0:0,-4.81648,-10 0/1:99:38:21:786:17:594:-10,0,-10 1/1:12.1243:14:0:0:14:522:-10,-4.21442,0 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:29.9442:9:9:331:0:0:0,-2.70927,-10 0/1:0.034099:2:0:0:2:76:-7.22,-0.60206,0 0/1:99:46:26:973:20:722:-10,0,-10 0/0:54.0266:17:17:630:0:0:0,-5.11751,-10 0/0:81.1193:26:26:984:0:0:0,-7.82678,-10 0/0:44.9957:14:14:490:0:0:0,-4.21442,-10 0/0:38.9751:12:12:450:0:0:0,-3.61236,-10 0/0:26.9339:8:8:300:0:0:0,-2.40824,-10 0/0:84.1293:27:27:1021:0:0:0,-8.12781,-10 0/0:48.006:15:15:542:0:0:0,-4.51545,-10 0/0:99:35:35:1273:0:0:0,-10,-10 0/0:57.0369:18:18:657:0:0:0,-5.41854,-10 0/0:66.0678:21:21:759:0:0:0,-6.32163,-10 0/0:72.0884:23:23:860:0:0:0,-6.92369,-10 0/0:66.0678:21:21:785:0:0:0,-6.32163,-10 0/0:44.9957:14:14:525:0:0:0,-4.21442,-10 0/0:99:35:35:1255:0:0:0,-10,-10 0/0:38.9751:12:12:456:0:0:0,-3.61236,-10 0/0:51.0163:16:16:595:0:0:0,-4.81648,-10 0/0:60.0472:19:19:669:0:0:0,-5.71957,-10 0/0:60.0472:19:19:699:0:0:0,-5.71957,-10 0/0:44.9957:14:14:515:0:0:0,-4.21442,-10 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:41.9854:13:13:481:0:0:0,-3.91339,-10 0/0:54.0266:17:17:634:0:0:0,-5.11751,-10 0/0:26.9339:8:8:304:0:0:0,-2.40824,-10 0/0:20.9133:6:6:205:0:0:0,-1.80618,-10 0/0:51.0163:16:16:603:0:0:0,-4.81648,-10 0/0:96.1668:31:31:1170:0:0:0,-9.33193,-10 0/0:55.0359:26:25:935:1:16:0,-4.81181,-10 0/0:75.0986:24:24:889:0:0:0,-7.22472,-10 0/0:90.1502:29:29:1097:0:0:0,-8.72987,-10 0/0:60.0472:19:19:714:0:0:0,-5.71957,-10 0/0:11.8824:3:3:91:0:0:0,-0.90309,-8.49333 0/0:51.0163:16:16:607:0:0:0,-4.81648,-10 0/0:35.9648:11:11:411:0:0:0,-3.31133,-10 0/0:20.9133:6:6:228:0:0:0,-1.80618,-10 0/0:48.006:15:15:565:0:0:0,-4.51545,-10 0/0:72.0884:23:23:827:0:0:0,-6.92369,-10 0/0:51.0163:16:16:585:0:0:0,-4.81648,-10 scaffold_197 1539924 . G A 753.833 . AB=0.707317;ABP=18.3165;AC=2;AF=0.0108696;AN=184;AO=32;CIGAR=1X;DP=1650;DPB=1650;DPRA=1.18008;EPP=3.0103;EPPR=3.17279;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=3.58043;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1157;QR=59212;RO=1617;RPP=64.083;RPPR=3317.35;RUN=1;SAF=15;SAP=3.28173;SAR=17;SRF=780;SRP=7.37339;SRR=837;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.7521:10:10:369:0:0:0,-3.0103,-10 0/0:34.7315:8:8:295:0:0:0,-2.40824,-10 0/0:91.9267:27:27:987:0:0:0,-8.12781,-10 0/0:37.7418:9:9:326:0:0:0,-2.70927,-10 0/0:49.783:13:13:453:0:0:0,-3.91339,-10 0/0:37.7418:9:9:307:0:0:0,-2.70927,-10 0/0:70.855:20:20:734:0:0:0,-6.0206,-10 0/0:67.8447:19:19:681:0:0:0,-5.71957,-10 0/0:58.8138:16:16:599:0:0:0,-4.81648,-10 0/0:22.6903:4:4:150:0:0:0,-1.20412,-10 0/0:40.7521:10:10:354:0:0:0,-3.0103,-10 0/0:37.7418:9:9:342:0:0:0,-2.70927,-10 0/0:91.9267:27:27:977:0:0:0,-8.12781,-10 0/0:97.9461:29:29:1082:0:0:0,-8.72987,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:52.7932:14:14:525:0:0:0,-4.21442,-10 0/0:76.8756:22:22:809:0:0:0,-6.62266,-10 0/0:40.7521:10:10:379:0:0:0,-3.0103,-10 0/0:76.8756:22:22:802:0:0:0,-6.62266,-10 0/0:88.9166:26:26:930:0:0:0,-7.82678,-10 0/0:37.7418:9:9:336:0:0:0,-2.70927,-10 0/0:94.9366:28:28:1032:0:0:0,-8.42884,-10 0/0:40.7521:10:10:365:0:0:0,-3.0103,-10 0/0:52.7932:14:14:525:0:0:0,-4.21442,-10 0/0:70.855:20:20:741:0:0:0,-6.0206,-10 0/0:58.8138:16:16:579:0:0:0,-4.81648,-10 0/0:67.8447:19:19:698:0:0:0,-5.71957,-10 0/0:43.7624:11:11:416:0:0:0,-3.31133,-10 0/0:49.783:13:13:493:0:0:0,-3.91339,-10 0/0:99:47:47:1730:0:0:0,-10,-10 0/0:34.7315:8:8:295:0:0:0,-2.40824,-10 0/0:22.6903:4:4:149:0:0:0,-1.20412,-10 0/0:64.8344:18:18:624:0:0:0,-5.41854,-10 0/0:43.7624:11:11:412:0:0:0,-3.31133,-10 0/0:49.783:13:13:485:0:0:0,-3.91339,-10 0/0:31.7212:7:7:265:0:0:0,-2.10721,-10 0/0:64.8344:18:18:672:0:0:0,-5.41854,-10 0/0:88.9166:26:26:921:0:0:0,-7.82678,-10 0/0:79.8859:23:23:858:0:0:0,-6.92369,-10 0/0:49.783:13:13:494:0:0:0,-3.91339,-10 0/0:70.855:20:20:749:0:0:0,-6.0206,-10 0/0:55.8035:15:15:568:0:0:0,-4.51545,-10 0/0:52.7932:14:14:532:0:0:0,-4.21442,-10 0/0:97.9461:29:29:1076:0:0:0,-8.72987,-10 0/0:67.8447:19:19:709:0:0:0,-5.71957,-10 0/0:37.7418:9:9:328:0:0:0,-2.70927,-10 0/0:99:40:40:1513:0:0:0,-10,-10 0/0:37.7418:9:9:318:0:0:0,-2.70927,-10 0/0:58.8138:16:16:547:0:0:0,-4.81648,-10 0/0:99:37:37:1344:0:0:0,-10,-10 0/0:52.7932:14:14:526:0:0:0,-4.21442,-10 0/0:99:37:37:1240:0:0:0,-10,-10 0/0:37.7418:9:9:332:0:0:0,-2.70927,-10 0/0:16.6697:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:46:46:1678:0:0:0,-10,-10 0/0:61.8241:17:17:614:0:0:0,-5.11751,-10 0/0:88.9166:26:26:957:0:0:0,-7.82678,-10 0/0:52.7932:14:14:472:0:0:0,-4.21442,-10 0/0:46.7727:12:12:443:0:0:0,-3.61236,-10 0/0:34.7315:8:8:302:0:0:0,-2.40824,-10 0/0:88.9166:26:26:959:0:0:0,-7.82678,-10 0/0:55.8035:15:15:561:0:0:0,-4.51545,-10 0/0:99:35:35:1286:0:0:0,-10,-10 0/0:64.8344:18:18:662:0:0:0,-5.41854,-10 0/0:73.8653:21:21:786:0:0:0,-6.32163,-10 0/0:79.8859:23:23:832:0:0:0,-6.92369,-10 0/0:73.8653:21:21:755:0:0:0,-6.32163,-10 0/0:52.7932:14:14:526:0:0:0,-4.21442,-10 0/0:99:35:35:1252:0:0:0,-10,-10 0/0:46.7727:12:12:451:0:0:0,-3.61236,-10 0/0:58.8138:16:16:599:0:0:0,-4.81648,-10 0/0:67.8447:19:19:694:0:0:0,-5.71957,-10 0/0:67.8447:19:19:693:0:0:0,-5.71957,-10 0/0:49.783:13:13:481:0:0:0,-3.91339,-10 0/0:99:31:30:1081:0:0:0,-9.0309,-10 0/0:27.6882:13:12:451:1:14:0,-1.39945,-10 0/0:61.8241:17:17:619:0:0:0,-5.11751,-10 0/0:34.7315:8:8:304:0:0:0,-2.40824,-10 0/0:28.7109:6:6:227:0:0:0,-1.80618,-10 0/1:0.113075:15:0:0:15:564:-10,-4.51545,0 0/0:31.7022:30:28:1045:2:52:0,-1.45241,-10 0/1:99:26:12:423:14:527:-10,0,-10 0/0:82.8962:24:24:822:0:0:0,-7.22472,-10 0/0:97.9461:29:29:1087:0:0:0,-8.72987,-10 0/0:67.8447:19:19:685:0:0:0,-5.71957,-10 0/0:19.68:3:3:103:0:0:0,-0.90309,-9.61333 0/0:58.8138:16:16:595:0:0:0,-4.81648,-10 0/0:43.7624:11:11:394:0:0:0,-3.31133,-10 0/0:28.7109:6:6:227:0:0:0,-1.80618,-10 0/0:55.8035:15:15:563:0:0:0,-4.51545,-10 0/0:79.8859:23:23:821:0:0:0,-6.92369,-10 0/0:58.8138:16:16:599:0:0:0,-4.81648,-10 scaffold_197 1540166 . G A 347.174 . AB=0.411765;ABP=5.30951;AC=1;AF=0.00537634;AN=186;AO=17;CIGAR=1X;DP=2176;DPB=2176;DPRA=1.62377;EPP=3.13803;EPPR=4.04069;GTI=0;LEN=1;MEANALT=1;MQM=24.8235;MQMR=43.6589;NS=93;NUMALT=1;ODDS=8.60452;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=558;QR=79140;RO=2158;RPP=39.9253;RPPR=4680.37;RUN=1;SAF=9;SAP=3.13803;SAR=8;SRF=1094;SRP=3.91592;SRR=1064;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:94.5661:20:20:734:0:0:0,-6.0206,-10 0/0:58.4425:8:8:302:0:0:0,-2.40824,-10 0/0:99:30:30:1132:0:0:0,-9.0309,-10 0/0:99:27:27:1021:0:0:0,-8.12781,-10 0/0:99:26:26:943:0:0:0,-7.82678,-10 0/0:91.5558:19:19:694:0:0:0,-5.71957,-10 0/0:99:36:36:1354:0:0:0,-10,-10 0/0:99:25:25:916:0:0:0,-7.52575,-10 0/0:91.5558:19:19:700:0:0:0,-5.71957,-10 0/0:40.3807:2:2:54:0:0:0,-0.60206,-5.13 0/0:55.4322:7:7:266:0:0:0,-2.10721,-10 0/0:67.4734:11:11:418:0:0:0,-3.31133,-10 0/0:99:41:41:1516:0:0:0,-10,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:93.0431:30:29:1026:1:16:0,-5.95378,-10 0/0:97.5707:21:21:760:0:0:0,-6.32163,-10 0/0:67.4734:11:11:395:0:0:0,-3.31133,-10 0/0:99:27:27:1021:0:0:0,-8.12781,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:94.5661:20:20:745:0:0:0,-6.0206,-10 0/0:99:50:50:1884:0:0:0,-10,-10 0/0:79.5145:15:15:541:0:0:0,-4.51545,-10 0/0:97.5707:21:21:791:0:0:0,-6.32163,-10 0/0:99:34:34:1266:0:0:0,-10,-10 0/0:99:40:40:1445:0:0:0,-10,-10 0/0:99:24:24:857:0:0:0,-7.22472,-10 0/0:76.5043:14:14:493:0:0:0,-4.21442,-10 0/0:99:28:28:999:0:0:0,-8.42884,-10 0/0:99:46:45:1705:1:16:0,-10,-10 0/0:46.4013:4:4:151:0:0:0,-1.20412,-10 0/0:64.4631:10:10:379:0:0:0,-3.0103,-10 0/0:99:27:27:977:0:0:0,-8.12781,-10 0/0:73.494:13:13:472:0:0:0,-3.91339,-10 0/0:99:33:33:1202:0:0:0,-9.93399,-10 0/0:46.4013:4:4:152:0:0:0,-1.20412,-10 0/0:64.4631:10:10:371:0:0:0,-3.0103,-10 0/0:99:35:35:1248:0:0:0,-10,-10 0/0:82.5249:16:16:569:0:0:0,-4.81648,-10 0/0:82.5249:16:16:576:0:0:0,-4.81648,-10 0/0:99:37:37:1332:0:0:0,-10,-10 0/0:97.5707:21:21:795:0:0:0,-6.32163,-10 0/0:99:23:23:823:0:0:0,-6.92369,-10 0/0:99:39:39:1463:0:0:0,-10,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:61.4528:9:9:312:0:0:0,-2.70927,-10 0/0:99:52:52:1877:0:0:0,-10,-10 0/0:99:35:35:1306:0:0:0,-10,-10 0/0:88.5455:18:18:638:0:0:0,-5.41854,-10 0/0:99:29:29:1055:0:0:0,-8.72987,-10 0/0:76.5043:14:14:497:0:0:0,-4.21442,-10 0/0:99:45:45:1629:0:0:0,-10,-10 0/0:82.5249:16:16:581:0:0:0,-4.81648,-10 0/0:64.4631:10:10:379:0:0:0,-3.0103,-10 0/0:99:58:58:2133:0:0:0,-10,-10 0/0:70.4837:12:12:455:0:0:0,-3.61236,-10 0/0:82.5249:16:16:597:0:0:0,-4.81648,-10 0/0:52.4219:6:6:226:0:0:0,-1.80618,-10 0/0:73.494:13:13:492:0:0:0,-3.91339,-10 0/0:79.5145:15:15:536:0:0:0,-4.51545,-10 0/0:99:36:36:1353:0:0:0,-10,-10 0/0:99:33:33:1192:0:0:0,-9.93399,-10 0/0:99:41:41:1462:0:0:0,-10,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:88.5455:18:18:625:0:0:0,-5.41854,-10 0/0:99:34:34:1240:0:0:0,-10,-10 0/0:85.5348:17:17:638:0:0:0,-5.11751,-10 0/0:73.494:14:13:456:0:0:0,-3.91339,-10 0/0:99:38:37:1361:1:16:0,-8.25936,-10 0/0:70.4837:12:12:448:0:0:0,-3.61236,-10 0/0:99:25:25:882:0:0:0,-7.52575,-10 0/0:99:39:39:1460:0:0:0,-10,-10 0/0:99:41:41:1515:0:0:0,-10,-10 0/0:99:22:22:777:0:0:0,-6.62266,-10 0/1:99:34:20:720:14:510:-10,0,-10 0/0:70.4837:12:12:451:0:0:0,-3.61236,-10 0/0:64.4631:10:10:372:0:0:0,-3.0103,-10 0/0:99:22:22:821:0:0:0,-6.62266,-10 0/0:55.4322:7:7:266:0:0:0,-2.10721,-10 0/0:73.494:13:13:471:0:0:0,-3.91339,-10 0/0:99:40:40:1483:0:0:0,-10,-10 0/0:99:28:28:1008:0:0:0,-8.42884,-10 0/0:99:28:28:1036:0:0:0,-8.42884,-10 0/0:97.5707:21:21:770:0:0:0,-6.32163,-10 0/0:99:24:24:910:0:0:0,-7.22472,-10 0/0:61.4528:9:9:342:0:0:0,-2.70927,-10 0/0:94.5661:20:20:730:0:0:0,-6.0206,-10 0/0:99:22:22:753:0:0:0,-6.62266,-10 0/0:61.4528:9:9:321:0:0:0,-2.70927,-10 0/0:94.5661:20:20:734:0:0:0,-6.0206,-10 0/0:76.5043:14:14:523:0:0:0,-4.21442,-10 0/0:99:26:26:963:0:0:0,-7.82678,-10 scaffold_198 3205 . G C 116.421 . AB=0.132653;ABP=347.61;AC=6;AF=0.0326087;AN=184;AO=143;CIGAR=1X;DP=4211;DPB=4211;DPRA=1.05981;EPP=313.531;EPPR=8793.13;GTI=16;LEN=1;MEANALT=1.13462;MQM=22.1329;MQMR=23.9914;NS=92;NUMALT=1;ODDS=26.8069;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5121;QR=144961;RO=4048;RPP=313.531;RPPR=8793.13;RUN=1;SAF=143;SAP=313.531;SAR=0;SRF=4048;SRP=8793.13;SRR=0;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:68:66:2327:0:0:0,-10,-10 0/0:99:32:30:1098:1:31:0,-5.08557,-10 0/0:99:35:35:1234:0:0:0,-10,-10 0/0:99:50:49:1790:0:0:0,-10,-10 0/1:99:15:12:456:3:114:-8.78256,0,-10 0/0:99:38:38:1395:0:0:0,-10,-10 0/0:99:76:74:2684:2:71:0,-10,-10 0/1:99:42:35:1246:7:255:-10,0,-10 0/0:99:34:33:1184:1:38:0,-4.90354,-10 0/0:99:20:19:711:1:38:0,-0.91957,-10 0/0:99:21:21:762:0:0:0,-6.32163,-10 0/0:99:25:23:837:2:76:-2.17137,0,-10 0/0:99:63:58:2141:5:181:-4.53399,0,-10 0/0:99:58:58:2062:0:0:0,-10,-10 0/0:99:59:59:2152:0:0:0,-10,-10 0/0:99:63:55:1954:4:144:-0.856112,0,-10 0/0:99:23:21:751:2:76:-2.69943,0,-10 0/1:99:33:29:1031:4:120:-5.77795,0,-10 0/0:99:29:29:1043:0:0:0,-8.72987,-10 0/0:99:55:55:1930:0:0:0,-10,-10 0/0:99:32:32:1143:0:0:0,-9.63296,-10 0/0:99:47:47:1713:0:0:0,-10,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:99:21:21:716:0:0:0,-6.32163,-10 0/0:99:66:64:2337:2:74:0,-9.50655,-10 0/0:99:39:36:1353:3:77:0,-0.592604,-10 0/0:99:55:55:1942:0:0:0,-10,-10 0/0:99:45:42:1479:1:38:0,-7.88915,-10 0/0:99:49:47:1676:2:76:0,-4.46006,-10 0/0:99:53:49:1714:4:152:-3.57202,0,-10 0/0:99:14:14:496:0:0:0,-4.21442,-10 0/0:99:48:44:1563:4:142:-3.97466,0,-10 0/0:99:76:76:2730:0:0:0,-10,-10 0/0:99:32:31:1106:1:38:0,-4.32781,-10 0/0:99:60:56:2037:4:150:-1.5013,0,-10 0/0:99:18:18:612:0:0:0,-5.41854,-10 0/0:99:48:44:1542:4:152:-4.89966,0,-10 0/0:99:29:27:993:2:71:-0.623656,0,-10 0/0:99:57:56:2019:1:36:0,-10,-10 0/0:99:12:12:444:0:0:0,-3.61236,-10 0/0:99:62:59:2136:3:106:0,-4.1928,-10 0/1:99:73:66:2428:7:242:-9.36254,0,-10 0/0:99:48:44:1583:3:102:0,-0.788493,-10 0/0:99:65:63:2159:2:74:0,-9.21889,-10 0/0:99:37:36:1287:1:38:0,-5.76991,-10 0/0:99:22:22:799:0:0:0,-6.62266,-10 0/0:99:46:46:1647:0:0:0,-10,-10 0/0:99:44:42:1501:2:59:0,-4.66443,-10 0/0:99:34:33:1208:1:36:0,-5.10354,-10 0/0:99:59:56:1988:3:111:0,-2.88877,-10 0/0:99:43:43:1555:0:0:0,-10,-10 0/0:99:51:51:1766:0:0:0,-10,-10 0/0:99:38:38:1287:0:0:0,-10,-10 0/0:99:22:22:787:0:0:0,-6.62266,-10 0/0:99:52:52:1926:0:0:0,-10,-10 0/0:99:54:52:1834:1:38:0,-10,-10 0/0:99:26:24:864:2:43:0,-1.2299,-10 0/0:99:44:43:1567:1:38:0,-7.80187,-10 0/0:99:53:52:1918:0:0:0,-10,-10 0/0:99:36:35:1237:0:0:0,-10,-10 0/0:99:51:49:1754:2:74:0,-5.21702,-10 0/0:99:53:52:1838:1:38:0,-10,-10 0/1:99:92:76:2701:13:470:-10,0,-10 0/0:99:28:26:956:2:74:-1.17865,0,-10 0/0:99:31:30:1093:0:0:0,-9.0309,-10 0/0:99:55:51:1868:4:150:-2.85117,0,-10 0/0:99:34:32:1117:2:76:0,-0.266057,-10 0/0:99:32:32:1117:0:0:0,-9.63296,-10 0/0:99:57:54:1928:3:104:0,-2.98577,-10 0/0:99:27:27:937:0:0:0,-8.12781,-10 0/0:99:159:159:5747:0:0:0,-10,-10 0/0:99:70:70:2470:0:0:0,-10,-10 0/0:99:58:58:2043:0:0:0,-10,-10 0/0:99:151:148:5290:3:107:0,-10,-10 0/0:99:82:82:2919:0:0:0,-10,-10 0/0:99:33:30:1009:3:113:-4.34955,0,-10 0/1:99:39:34:1170:5:185:-10,0,-10 0/0:99:38:38:1365:0:0:0,-10,-10 0/0:99:22:21:765:1:38:0,-1.48024,-10 0/0:99:43:42:1480:1:38:0,-7.51082,-10 0/0:99:67:62:2211:5:186:-3.92786,0,-10 0/0:99:58:54:1967:4:132:-0.377903,0,-10 0/0:99:35:35:1245:0:0:0,-10,-10 0/0:99:34:30:1103:2:76:0,-0.0974782,-10 0/0:99:38:38:1360:0:0:0,-10,-10 0/0:99:13:13:420:0:0:0,-3.91339,-10 0/0:99:75:75:2725:0:0:0,-10,-10 0/0:99:40:38:1382:2:71:0,-2.40411,-10 0/0:99:7:6:223:1:38:-2.53789,0,-10 0/0:99:32:32:1101:0:0:0,-9.63296,-10 0/0:99:25:23:856:2:76:-2.17137,0,-10 0/0:99:53:52:1810:1:38:0,-10,-10 scaffold_198 99792 . C T 1772.74 . AB=0.546512;ABP=4.62628;AC=6;AF=0.0326087;AN=184;AO=72;CIGAR=1X;DP=2088;DPB=2088;DPRA=1.35081;EPP=6.02623;EPPR=12.7361;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9568;NS=92;NUMALT=1;ODDS=0.63796;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2589;QR=73345;RO=2015;RPP=159.356;RPPR=4378.53;RUN=1;SAF=31;SAP=6.02623;SAR=41;SRF=960;SRP=12.7361;SRR=1055;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.8477:16:16:536:0:0:0,-4.81648,-10 0/0:42.755:7:7:265:0:0:0,-2.10721,-10 0/0:90.9197:23:23:851:0:0:0,-6.92369,-10 0/0:63.8271:14:14:526:0:0:0,-4.21442,-10 0/0:87.9088:22:22:829:0:0:0,-6.62266,-10 0/0:54.7962:11:11:415:0:0:0,-3.31133,-10 0/0:99:39:39:1388:0:0:0,-10,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:69.8477:16:16:578:0:0:0,-4.81648,-10 0/0:36.7344:5:5:183:0:0:0,-1.50515,-10 0/0:33.7241:4:4:124:0:0:0,-1.20412,-10 0/0:39.7447:6:6:228:0:0:0,-1.80618,-10 0/0:99:46:46:1633:0:0:0,-10,-10 0/0:99:41:41:1505:0:0:0,-10,-10 0/0:99:37:37:1354:0:0:0,-10,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:69.8477:16:16:572:0:0:0,-4.81648,-10 0/0:96.9398:25:25:923:0:0:0,-7.52575,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/1:99:21:12:455:9:331:-10,0,-10 0/0:85.217:31:30:1112:1:16:0,-6.24057,-10 0/0:42.755:8:7:263:0:0:0,-2.10721,-10 0/0:63.8271:14:14:504:0:0:0,-4.21442,-10 0/0:81.8889:20:20:738:0:0:0,-6.0206,-10 0/0:99:37:37:1381:0:0:0,-10,-10 0/0:57.8065:12:12:453:0:0:0,-3.61236,-10 0/0:63.8271:14:14:513:0:0:0,-4.21442,-10 0/0:69.8477:16:16:563:0:0:0,-4.81648,-10 0/0:99:34:34:1229:0:0:0,-10,-10 0/0:48.7756:9:9:307:0:0:0,-2.70927,-10 0/0:54.7962:11:11:405:0:0:0,-3.31133,-10 0/0:60.8168:13:13:487:0:0:0,-3.91339,-10 0/0:60.8168:13:13:450:0:0:0,-3.91339,-10 0/0:96.9398:25:25:903:0:0:0,-7.52575,-10 0/0:66.8374:15:15:487:0:0:0,-4.51545,-10 0/0:33.7241:4:4:149:0:0:0,-1.20412,-10 0/0:99:29:29:1080:0:0:0,-8.72987,-10 0/0:96.9398:25:25:917:0:0:0,-7.52575,-10 0/0:93.9274:24:24:900:0:0:0,-7.22472,-10 0/0:99:29:29:1073:0:0:0,-8.72987,-10 0/0:93.9274:24:24:898:0:0:0,-7.22472,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:99:30:30:1077:0:0:0,-9.0309,-10 0/0:96.9398:25:25:920:0:0:0,-7.52575,-10 0/0:75.8683:18:18:678:0:0:0,-5.41854,-10 0/0:99:43:43:1565:0:0:0,-10,-10 0/0:90.9197:23:23:845:0:0:0,-6.92369,-10 0/0:60.8168:13:13:488:0:0:0,-3.91339,-10 0/0:99:44:43:1552:1:16:0,-10,-10 0/0:84.8989:21:21:785:0:0:0,-6.32163,-10 0/0:99:49:49:1799:0:0:0,-10,-10 0/0:57.8065:12:12:432:0:0:0,-3.61236,-10 0/0:54.7962:11:11:418:0:0:0,-3.31133,-10 0/0:99:39:39:1391:0:0:0,-10,-10 0/0:63.8271:14:14:532:0:0:0,-4.21442,-10 0/0:81.8889:20:20:744:0:0:0,-6.0206,-10 0/0:57.8065:12:12:436:0:0:0,-3.61236,-10 1/1:16.6893:22:0:0:22:787:-10,-6.62266,0 0/1:1.78981:17:0:0:17:633:-10,-5.11751,0 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:93.9274:24:24:906:0:0:0,-7.22472,-10 0/0:99:46:46:1667:0:0:0,-10,-10 0/0:93.9274:24:24:805:0:0:0,-7.22472,-10 0/0:57.8065:12:12:446:0:0:0,-3.61236,-10 0/0:99:33:33:1185:0:0:0,-9.93399,-10 0/1:99:25:14:491:11:395:-10,0,-10 0/0:36.7344:5:5:183:0:0:0,-1.50515,-10 0/0:99:34:34:1252:0:0:0,-10,-10 0/0:63.8271:14:14:485:0:0:0,-4.21442,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:81.8889:20:20:699:0:0:0,-6.0206,-10 0/0:99:35:35:1282:0:0:0,-10,-10 0/0:66.8374:15:15:531:0:0:0,-4.51545,-10 0/0:66.8374:15:15:556:0:0:0,-4.51545,-10 0/0:72.858:17:17:626:0:0:0,-5.11751,-10 0/0:45.7653:8:8:298:0:0:0,-2.40824,-10 0/0:75.8683:18:18:626:0:0:0,-5.41854,-10 0/0:99:55:54:1864:1:38:0,-10,-10 0/0:99:39:39:1379:0:0:0,-10,-10 0/0:84.8989:21:21:757:0:0:0,-6.32163,-10 0/0:96.9398:25:25:896:0:0:0,-7.52575,-10 0/0:99:29:29:1082:0:0:0,-8.72987,-10 0/0:60.8168:13:13:440:0:0:0,-3.91339,-10 0/0:90.9197:23:23:840:0:0:0,-6.92369,-10 0/0:63.8271:14:14:500:0:0:0,-4.21442,-10 0/0:45.7653:8:8:301:0:0:0,-2.40824,-10 0/0:75.8683:18:18:672:0:0:0,-5.41854,-10 0/1:99:23:13:468:10:373:-10,0,-10 0/0:93.9274:24:24:882:0:0:0,-7.22472,-10 scaffold_198 158393 . G C 1897.77 . AB=0.453416;ABP=6.04497;AC=7;AF=0.0380435;AN=184;AO=73;CIGAR=1X;DP=1943;DPB=1943;DPRA=1.09708;EPP=4.46786;EPPR=5.80286;GTI=0;LEN=1;MEANALT=1;MQM=59.3288;MQMR=59.5817;NS=92;NUMALT=1;ODDS=5.52171;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2647;QR=68477;RO=1867;RPP=161.528;RPPR=213.092;RUN=1;SAF=33;SAP=4.46786;SAR=40;SRF=915;SRP=4.60256;SRR=952;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:84.2243:21:21:781:0:0:0,-6.32163,-10 0/0:36.0595:5:5:185:0:0:0,-1.50515,-10 0/0:81.214:20:20:688:0:0:0,-6.0206,-10 0/0:78.2037:19:19:691:0:0:0,-5.71957,-10 0/0:63.1522:14:14:527:0:0:0,-4.21442,-10 0/0:45.0904:8:8:303:0:0:0,-2.40824,-10 0/0:99:43:43:1571:0:0:0,-10,-10 0/0:75.1934:18:18:653:0:0:0,-5.41854,-10 0/0:60.1419:13:13:491:0:0:0,-3.91339,-10 0/0:24.0183:1:1:38:0:0:0,-0.30103,-3.8 0/0:63.1522:14:14:532:0:0:0,-4.21442,-10 0/0:42.0801:7:7:265:0:0:0,-2.10721,-10 0/0:99:26:26:982:0:0:0,-7.82678,-10 0/0:99:42:42:1528:0:0:0,-10,-10 0/0:96.2656:25:25:914:0:0:0,-7.52575,-10 0/1:99:16:11:409:5:190:-10,0,-10 0/1:99:23:8:282:15:534:-10,0,-10 0/0:48.1007:9:9:337:0:0:0,-2.70927,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:99:37:37:1370:0:0:0,-10,-10 0/0:75.1934:18:18:654:0:0:0,-5.41854,-10 0/0:99:32:32:1183:0:0:0,-9.63296,-10 0/0:57.1316:12:12:441:0:0:0,-3.61236,-10 0/1:99:27:19:664:8:291:-10,0,-10 0/0:99:37:37:1288:0:0:0,-10,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:87.2346:22:22:816:0:0:0,-6.62266,-10 0/0:66.1625:15:15:570:0:0:0,-4.51545,-10 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:99:53:53:1903:0:0:0,-10,-10 0/0:42.0801:7:7:266:0:0:0,-2.10721,-10 0/0:33.0492:4:4:142:0:0:0,-1.20412,-10 0/0:63.1522:14:14:530:0:0:0,-4.21442,-10 0/0:51.111:10:10:376:0:0:0,-3.0103,-10 0/0:96.2656:25:25:930:0:0:0,-7.52575,-10 0/0:27.0286:2:2:76:0:0:0,-0.60206,-7.22 0/0:57.1316:12:12:451:0:0:0,-3.61236,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:72.1831:17:17:609:0:0:0,-5.11751,-10 0/0:99:27:27:1000:0:0:0,-8.12781,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:69.1728:16:16:581:0:0:0,-4.81648,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:90.2448:23:23:848:0:0:0,-6.92369,-10 0/0:99:41:41:1448:0:0:0,-10,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:87.2346:22:22:813:0:0:0,-6.62266,-10 0/0:99:45:45:1649:0:0:0,-10,-10 0/0:72.1831:17:17:644:0:0:0,-5.11751,-10 0/0:99:43:42:1553:0:0:0,-10,-10 0/0:72.1831:17:17:639:0:0:0,-5.11751,-10 0/0:51.111:10:10:376:0:0:0,-3.0103,-10 0/0:99:41:41:1455:0:0:0,-10,-10 0/0:72.1831:17:17:615:0:0:0,-5.11751,-10 0/1:99:18:11:381:7:242:-10,0,-10 0/0:54.1213:11:11:392:0:0:0,-3.31133,-10 0/0:60.1419:13:13:466:0:0:0,-3.91339,-10 0/0:51.111:10:10:380:0:0:0,-3.0103,-10 0/1:99:31:20:737:11:395:-10,0,-10 0/0:93.255:24:24:848:0:0:0,-7.22472,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/1:99:16:8:302:8:297:-10,0,-10 0/0:36.0595:5:5:186:0:0:0,-1.50515,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:75.1934:18:18:674:0:0:0,-5.41854,-10 0/0:51.111:10:10:366:0:0:0,-3.0103,-10 0/0:99:41:40:1462:0:0:0,-10,-10 0/0:72.1831:17:17:596:0:0:0,-5.11751,-10 0/0:90.2448:23:23:826:0:0:0,-6.92369,-10 0/0:99:26:26:981:0:0:0,-7.82678,-10 0/0:99:29:28:1038:0:0:0,-8.42884,-10 0/0:90.2448:23:23:872:0:0:0,-6.92369,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:81.214:20:20:751:0:0:0,-6.0206,-10 0/0:51.111:10:10:376:0:0:0,-3.0103,-10 0/0:60.1419:13:13:474:0:0:0,-3.91339,-10 0/0:36.0595:5:5:177:0:0:0,-1.50515,-10 0/0:48.1007:9:9:328:0:0:0,-2.70927,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:84.2243:21:21:784:0:0:0,-6.32163,-10 0/0:78.2037:19:19:721:0:0:0,-5.71957,-10 0/0:63.1522:14:14:504:0:0:0,-4.21442,-10 0/1:99:30:11:417:19:698:-10,0,-10 0/0:30.0389:3:3:114:0:0:0,-0.90309,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:66.1625:15:15:526:0:0:0,-4.51545,-10 0/0:36.0595:5:5:190:0:0:0,-1.50515,-10 0/0:72.1831:17:17:643:0:0:0,-5.11751,-10 0/0:60.1419:13:13:483:0:0:0,-3.91339,-10 0/0:87.2346:22:22:806:0:0:0,-6.62266,-10 scaffold_198 158414 . C T 75.037 . AB=0.277778;ABP=10.7311;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1X;DP=1929;DPB=1929;DPRA=1.06749;EPP=3.32051;EPPR=7.21647;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.5872;NS=92;NUMALT=1;ODDS=13.6616;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=219;QR=70446;RO=1921;RPP=18.2106;RPPR=4165.73;RUN=1;SAF=4;SAP=3.32051;SAR=3;SRF=931;SRP=6.94518;SRR=990;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:86.0975:20:19:690:1:15:0,-3.21957,-10 0/0:71.3727:5:5:174:0:0:0,-1.50515,-10 0/0:99:20:20:742:0:0:0,-6.0206,-10 0/0:99:19:19:680:0:0:0,-5.71957,-10 0/0:95.4528:14:13:492:0:0:0,-3.91339,-10 0/0:77.3933:7:7:266:0:0:0,-2.10721,-10 0/0:99:43:43:1568:0:0:0,-10,-10 0/0:99:18:18:649:0:0:0,-5.41854,-10 0/0:95.4528:13:13:493:0:0:0,-3.91339,-10 0/0:59.3315:1:1:38:0:0:0,-0.30103,-3.8 0/0:98.4609:14:14:530:0:0:0,-4.21442,-10 0/0:77.3933:7:7:262:0:0:0,-2.10721,-10 0/0:99:26:26:974:0:0:0,-7.82678,-10 0/0:99:41:41:1533:0:0:0,-10,-10 0/0:99:24:24:862:0:0:0,-7.22472,-10 0/0:99:16:16:562:0:0:0,-4.81648,-10 0/0:99:23:23:835:0:0:0,-6.92369,-10 0/0:83.4138:9:9:333:0:0:0,-2.70927,-10 0/0:99:27:27:984:0:0:0,-8.12781,-10 0/0:99:36:36:1321:0:0:0,-10,-10 0/0:99:18:18:654:0:0:0,-5.41854,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:92.4437:12:12:443:0:0:0,-3.61236,-10 0/0:99:27:27:979:0:0:0,-8.12781,-10 0/0:99:37:37:1331:0:0:0,-10,-10 0/0:99:27:27:1011:0:0:0,-8.12781,-10 0/0:99:21:21:770:0:0:0,-6.32163,-10 0/0:99:15:15:568:0:0:0,-4.51545,-10 0/0:99:29:28:1001:1:16:0,-5.66747,-10 0/0:99:53:53:1917:0:0:0,-10,-10 0/0:77.3933:7:7:248:0:0:0,-2.10721,-10 0/0:68.3624:4:4:152:0:0:0,-1.20412,-10 0/0:98.4609:14:14:515:0:0:0,-4.21442,-10 0/0:86.4239:10:10:374:0:0:0,-3.0103,-10 0/0:99:25:25:945:0:0:0,-7.52575,-10 0/0:59.3315:1:1:38:0:0:0,-0.30103,-3.8 0/0:92.4437:12:12:451:0:0:0,-3.61236,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:99:30:30:1089:0:0:0,-9.0309,-10 0/0:99:17:17:589:0:0:0,-5.11751,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:99:16:16:595:0:0:0,-4.81648,-10 0/0:99:33:33:1214:0:0:0,-9.93399,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:99:23:23:855:0:0:0,-6.92369,-10 0/0:99:41:41:1426:0:0:0,-10,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:99:22:22:803:0:0:0,-6.62266,-10 0/0:99:45:45:1604:0:0:0,-10,-10 0/0:99:17:17:646:0:0:0,-5.11751,-10 0/0:99:43:43:1526:0:0:0,-10,-10 0/0:99:17:17:643:0:0:0,-5.11751,-10 0/0:86.4239:10:10:379:0:0:0,-3.0103,-10 0/0:99:41:41:1375:0:0:0,-10,-10 0/0:99:17:17:612:0:0:0,-5.11751,-10 0/0:99:18:18:609:0:0:0,-5.41854,-10 0/0:89.4339:11:11:405:0:0:0,-3.31133,-10 0/0:95.4528:13:13:478:0:0:0,-3.91339,-10 0/0:86.4239:10:10:376:0:0:0,-3.0103,-10 0/0:99:28:28:1046:0:0:0,-8.42884,-10 0/0:99:24:24:883:0:0:0,-7.22472,-10 0/0:99:32:32:1194:0:0:0,-9.63296,-10 0/0:99:16:16:578:0:0:0,-4.81648,-10 0/0:71.3727:5:5:190:0:0:0,-1.50515,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/1:75.037:18:13:485:5:188:-10,0,-10 0/0:86.4239:10:10:364:0:0:0,-3.0103,-10 0/0:99:41:41:1519:0:0:0,-10,-10 0/0:99:16:16:590:0:0:0,-4.81648,-10 0/0:99:22:22:795:0:0:0,-6.62266,-10 0/0:99:26:26:975:0:0:0,-7.82678,-10 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:99:23:23:858:0:0:0,-6.92369,-10 0/0:99:31:31:1163:0:0:0,-9.33193,-10 0/0:99:20:20:746:0:0:0,-6.0206,-10 0/0:86.4239:10:10:379:0:0:0,-3.0103,-10 0/0:95.4528:13:13:485:0:0:0,-3.91339,-10 0/0:71.3727:5:5:186:0:0:0,-1.50515,-10 0/0:83.4138:9:9:332:0:0:0,-2.70927,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:99:21:21:780:0:0:0,-6.32163,-10 0/0:99:19:19:718:0:0:0,-5.71957,-10 0/0:95.4528:13:13:482:0:0:0,-3.91339,-10 0/0:99:30:30:1110:0:0:0,-9.0309,-10 0/0:65.3521:3:3:114:0:0:0,-0.90309,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:99:15:15:556:0:0:0,-4.51545,-10 0/0:71.3727:5:5:190:0:0:0,-1.50515,-10 0/0:99:17:17:620:0:0:0,-5.11751,-10 0/0:95.4528:13:13:491:0:0:0,-3.91339,-10 0/0:99:22:22:823:0:0:0,-6.62266,-10 scaffold_198 398284 . A G 1903.45 . AB=0.612245;ABP=13.7347;AC=9;AF=0.048913;AN=184;AO=77;CIGAR=1X;DP=1499;DPB=1499;DPRA=0.950045;EPP=3.0385;EPPR=4.12431;GTI=4;LEN=1;MEANALT=1;MQM=60;MQMR=59.962;NS=92;NUMALT=1;ODDS=0.764638;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2771;QR=51950;RO=1421;RPP=170.214;RPPR=3088.67;RUN=1;SAF=38;SAP=3.0385;SAR=39;SRF=697;SRP=4.12431;SRR=724;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.00830917:12:1:16:11:411:-10,-0.933179,0 0/0:40.4463:7:7:264:0:0:0,-2.10721,-10 0/1:99:24:14:495:10:348:-10,0,-10 0/0:46.4669:9:9:334:0:0:0,-2.70927,-10 0/0:55.4978:12:12:447:0:0:0,-3.61236,-10 0/0:58.5081:13:13:494:0:0:0,-3.91339,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:99:28:28:987:0:0:0,-8.42884,-10 0/0:49.4772:10:10:377:0:0:0,-3.0103,-10 0/0:34.4257:5:5:179:0:0:0,-1.50515,-10 0/0:25.3948:2:2:76:0:0:0,-0.60206,-7.22 0/0:37.436:6:6:217:0:0:0,-1.80618,-10 0/0:99:30:30:1116:0:0:0,-9.0309,-10 0/0:99:33:33:1150:0:0:0,-9.93399,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/0:99:27:27:1003:0:0:0,-8.12781,-10 0/0:73.5596:18:18:683:0:0:0,-5.41854,-10 0/0:25.3948:2:2:75:0:0:0,-0.60206,-7.125 0/0:61.5184:14:14:527:0:0:0,-4.21442,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:34.4257:5:5:189:0:0:0,-1.50515,-10 0/0:71.1469:26:25:940:1:15:0,-4.91181,-10 0/0:40.4463:7:7:258:0:0:0,-2.10721,-10 0/0:64.5287:15:15:570:0:0:0,-4.51545,-10 0/0:61.5184:14:14:523:0:0:0,-4.21442,-10 0/0:88.6106:23:23:866:0:0:0,-6.92369,-10 0/0:82.5904:21:21:767:0:0:0,-6.32163,-10 0/0:58.5081:13:13:460:0:0:0,-3.91339,-10 0/0:70.5493:17:17:621:0:0:0,-5.11751,-10 0/0:91.6204:24:24:885:0:0:0,-7.22472,-10 0/0:31.4154:4:4:152:0:0:0,-1.20412,-10 0/0:40.4463:7:7:262:0:0:0,-2.10721,-10 0/0:79.5801:20:20:732:0:0:0,-6.0206,-10 0/0:43.4566:8:8:294:0:0:0,-2.40824,-10 0/0:46.4669:9:9:306:0:0:0,-2.70927,-10 0/0:46.4669:9:9:332:0:0:0,-2.70927,-10 0/0:55.4978:12:12:435:0:0:0,-3.61236,-10 0/0:99:30:30:1080:0:0:0,-9.0309,-10 0/0:58.5081:13:13:476:0:0:0,-3.91339,-10 0/0:52.4875:11:11:408:0:0:0,-3.31133,-10 0/0:85.6005:22:22:797:0:0:0,-6.62266,-10 0/0:58.5081:13:13:467:0:0:0,-3.91339,-10 0/0:43.4566:8:8:293:0:0:0,-2.40824,-10 0/0:88.6106:23:23:788:0:0:0,-6.92369,-10 0/0:64.5287:15:15:567:0:0:0,-4.51545,-10 0/0:55.4978:12:12:454:0:0:0,-3.61236,-10 0/0:99:36:36:1317:0:0:0,-10,-10 0/0:73.5596:18:18:637:0:0:0,-5.41854,-10 0/0:49.4772:10:10:367:0:0:0,-3.0103,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:64.5287:16:15:546:0:0:0,-4.51545,-10 0/0:88.6106:23:23:863:0:0:0,-6.92369,-10 0/0:67.539:16:16:583:0:0:0,-4.81648,-10 0/0:31.4154:4:4:130:0:0:0,-1.20412,-10 0/0:99:39:39:1447:0:0:0,-10,-10 0/0:40.4463:7:7:265:0:0:0,-2.10721,-10 0/0:67.539:16:16:555:0:0:0,-4.81648,-10 0/1:14.5879:7:6:205:1:37:-2.43789,0,-10 0/0:88.6106:23:23:835:0:0:0,-6.92369,-10 0/0:40.4463:7:7:266:0:0:0,-2.10721,-10 0/0:99:36:36:1263:0:0:0,-10,-10 1/1:5.59656:16:0:0:16:597:-10,-4.81648,0 0/0:99:29:29:1062:0:0:0,-8.72987,-10 0/0:64.5287:15:15:569:0:0:0,-4.51545,-10 0/0:37.436:6:6:214:0:0:0,-1.80618,-10 0/0:94.6327:25:25:919:0:0:0,-7.52575,-10 0/0:61.5184:14:14:510:0:0:0,-4.21442,-10 0/0:40.4463:7:7:235:0:0:0,-2.10721,-10 0/1:99:37:17:641:20:710:-10,0,-10 0/0:52.4875:11:11:416:0:0:0,-3.31133,-10 0/0:49.4772:10:10:360:0:0:0,-3.0103,-10 0/0:99:31:31:1113:0:0:0,-9.33193,-10 0/0:52.4875:11:11:393:0:0:0,-3.31133,-10 0/0:61.5184:14:14:498:0:0:0,-4.21442,-10 0/0:99:27:27:1024:0:0:0,-8.12781,-10 0/0:55.4978:12:12:410:0:0:0,-3.61236,-10 0/1:0.120558:8:0:0:8:289:-10,-2.40824,0 0/0:46.4669:9:9:342:0:0:0,-2.70927,-10 0/0:37.436:6:6:224:0:0:0,-1.80618,-10 0/0:34.4257:5:5:167:0:0:0,-1.50515,-10 0/0:99:41:41:1493:0:0:0,-10,-10 0/0:97.644:26:26:954:0:0:0,-7.82678,-10 0/0:73.5596:18:18:660:0:0:0,-5.41854,-10 0/0:61.5184:14:14:485:0:0:0,-4.21442,-10 0/0:85.6005:22:22:804:0:0:0,-6.62266,-10 0/1:0.244559:9:0:0:9:326:-10,-2.70927,0 0/0:37.436:6:6:218:0:0:0,-1.80618,-10 0/0:52.4875:11:11:418:0:0:0,-3.31133,-10 0/1:0.00092901:1:0:0:1:38:-3.8,-0.30103,0 0/0:82.5904:21:21:769:0:0:0,-6.32163,-10 0/0:49.4772:10:10:373:0:0:0,-3.0103,-10 0/0:67.539:16:16:605:0:0:0,-4.81648,-10 scaffold_198 531970 . C T 1099.83 . AB=0.544304;ABP=4.35716;AC=4;AF=0.0217391;AN=184;AO=44;CIGAR=1X;DP=1771;DPB=1771;DPRA=1.03026;EPP=4.78696;EPPR=3.41792;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=6.28758;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1620;QR=62998;RO=1726;RPP=98.5551;RPPR=3750.97;RUN=1;SAF=25;SAP=4.78696;SAR=19;SRF=872;SRP=3.41792;SRR=854;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.9546:13:13:472:0:0:0,-3.91339,-10 0/0:46.9134:9:9:332:0:0:0,-2.70927,-10 0/0:98.0908:26:26:968:0:0:0,-7.82678,-10 0/0:61.9649:14:14:478:0:0:0,-4.21442,-10 0/0:52.934:11:11:392:0:0:0,-3.31133,-10 0/0:40.8928:7:7:253:0:0:0,-2.10721,-10 0/0:99:37:37:1383:0:0:0,-10,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:49.9237:10:10:378:0:0:0,-3.0103,-10 0/0:28.8516:3:3:105:0:0:0,-0.90309,-9.8 0/0:40.8928:7:7:263:0:0:0,-2.10721,-10 0/0:58.9546:13:13:479:0:0:0,-3.91339,-10 0/0:99:35:35:1311:0:0:0,-10,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:98.0908:26:26:936:0:0:0,-7.82678,-10 0/0:80.0266:20:20:689:0:0:0,-6.0206,-10 0/0:83.0369:21:21:768:0:0:0,-6.32163,-10 0/0:58.9546:13:13:453:0:0:0,-3.91339,-10 0/0:83.0369:21:21:752:0:0:0,-6.32163,-10 0/0:99:43:43:1524:0:0:0,-10,-10 0/0:89.0571:23:23:839:0:0:0,-6.92369,-10 0/1:99:30:19:692:11:414:-10,0,-10 0/0:58.9546:13:13:470:0:0:0,-3.91339,-10 0/0:92.0685:24:24:900:0:0:0,-7.22472,-10 0/0:70.9958:17:17:631:0:0:0,-5.11751,-10 0/0:83.0369:21:21:785:0:0:0,-6.32163,-10 0/0:77.0164:19:19:689:0:0:0,-5.71957,-10 0/0:74.0061:18:18:636:0:0:0,-5.41854,-10 0/0:67.9855:16:16:595:0:0:0,-4.81648,-10 0/0:99:35:35:1291:0:0:0,-10,-10 0/0:49.9237:10:10:374:0:0:0,-3.0103,-10 0/0:46.9134:9:9:331:0:0:0,-2.70927,-10 0/0:98.0908:26:26:981:0:0:0,-7.82678,-10 0/0:52.934:11:11:416:0:0:0,-3.31133,-10 0/0:89.0571:23:23:819:0:0:0,-6.92369,-10 0/1:0.00201057:9:0:0:9:335:-10,-2.70927,0 0/0:46.9134:9:9:311:0:0:0,-2.70927,-10 0/0:89.0571:23:23:857:0:0:0,-6.92369,-10 0/0:70.9958:17:17:613:0:0:0,-5.11751,-10 0/0:61.9649:14:14:504:0:0:0,-4.21442,-10 0/1:99:29:17:643:12:454:-10,0,-10 0/1:0.00804787:11:0:0:11:401:-10,-3.31133,0 0/0:61.9649:14:14:515:0:0:0,-4.21442,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:58.9546:13:13:491:0:0:0,-3.91339,-10 0/0:54.7503:20:19:650:1:16:0,-3.11957,-10 0/0:99:34:34:1225:0:0:0,-10,-10 0/0:99:28:28:1040:0:0:0,-8.42884,-10 0/0:55.9443:12:12:455:0:0:0,-3.61236,-10 0/0:74.0061:19:18:650:0:0:0,-5.41854,-10 0/0:74.0061:18:18:672:0:0:0,-5.41854,-10 0/0:99:31:31:1153:0:0:0,-9.33193,-10 0/0:70.9958:17:17:636:0:0:0,-5.11751,-10 0/0:46.9134:9:9:318:0:0:0,-2.70927,-10 0/0:99:32:32:1133:0:0:0,-9.63296,-10 0/0:58.9546:13:13:444:0:0:0,-3.91339,-10 0/0:92.0685:24:24:882:0:0:0,-7.22472,-10 0/0:67.9855:16:16:560:0:0:0,-4.81648,-10 0/0:67.9855:16:16:551:0:0:0,-4.81648,-10 0/0:58.9546:13:13:484:0:0:0,-3.91339,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:80.0266:20:20:756:0:0:0,-6.0206,-10 0/0:99:31:31:1106:0:0:0,-9.33193,-10 0/0:80.0266:20:20:686:0:0:0,-6.0206,-10 0/0:46.9134:9:9:342:0:0:0,-2.70927,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:89.0571:23:23:805:0:0:0,-6.92369,-10 0/0:61.9649:14:14:527:0:0:0,-4.21442,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:58.9546:13:13:490:0:0:0,-3.91339,-10 0/0:64.9752:15:15:544:0:0:0,-4.51545,-10 0/0:98.0908:26:26:982:0:0:0,-7.82678,-10 0/0:99:32:32:1194:0:0:0,-9.63296,-10 0/0:52.934:11:11:416:0:0:0,-3.31133,-10 0/0:86.0471:22:22:824:0:0:0,-6.62266,-10 0/0:64.9752:15:15:531:0:0:0,-4.51545,-10 0/0:58.9546:13:13:470:0:0:0,-3.91339,-10 0/0:58.9546:13:13:470:0:0:0,-3.91339,-10 0/0:37.8825:6:6:226:0:0:0,-1.80618,-10 0/0:61.9649:14:14:512:0:0:0,-4.21442,-10 0/0:99:39:39:1433:0:0:0,-10,-10 0/0:95.0793:25:25:913:0:0:0,-7.52575,-10 0/0:89.0571:23:23:839:0:0:0,-6.92369,-10 0/0:95.0793:25:25:935:0:0:0,-7.52575,-10 0/0:61.9649:14:14:524:0:0:0,-4.21442,-10 0/0:40.8928:7:7:240:0:0:0,-2.10721,-10 0/0:43.9031:8:8:274:0:0:0,-2.40824,-10 0/0:49.9237:10:10:367:0:0:0,-3.0103,-10 0/0:52.934:11:11:390:0:0:0,-3.31133,-10 0/0:92.0685:24:24:836:0:0:0,-7.22472,-10 0/0:92.0685:24:24:894:0:0:0,-7.22472,-10 0/0:61.9649:14:14:470:0:0:0,-4.21442,-10 scaffold_198 532005 . G A 29246.7 . AB=0.501385;ABP=3.01632;AC=104;AF=0.565217;AN=184;AO=993;CIGAR=1X;DP=1786;DPB=1786;DPRA=1.0989;EPP=4.37704;EPPR=3.18577;GTI=1;LEN=1;MEANALT=1.01613;MQM=60;MQMR=59.9508;NS=92;NUMALT=1;ODDS=1.09167;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=36796;QR=28773;RO=792;RPP=2116.07;RPPR=1662.55;RUN=1;SAF=504;SAP=3.50233;SAR=489;SRF=395;SRP=3.02127;SRR=397;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:30.7927:13:0:0:13:462:-10,-3.91339,0 1/1:18.7515:9:0:0:9:335:-10,-2.70927,0 1/1:69.9266:26:0:0:26:979:-10,-7.82678,0 1/1:33.803:14:0:0:14:504:-10,-4.21442,0 0/1:99:11:6:196:5:190:-10,0,-10 1/1:12.7309:7:0:0:7:260:-10,-2.10721,0 0/0:99:37:37:1370:0:0:0,-10,-10 1/1:78.9575:29:0:0:29:1080:-10,-8.72987,0 1/1:21.7618:10:0:0:10:377:-10,-3.0103,0 0/1:0.655205:3:0:0:3:114:-10,-0.90309,0 1/1:12.7309:7:0:0:7:264:-10,-2.10721,0 1/1:30.7927:13:0:0:13:465:-10,-3.91339,0 1/1:49.4442:36:1:38:35:1313:-10,-5.48078,0 1/1:81.9677:30:0:0:30:1134:-10,-9.0309,0 1/1:69.9266:26:0:0:26:926:-10,-7.82678,0 1/1:51.8648:20:0:0:20:720:-10,-6.0206,0 0/1:99:21:14:507:7:253:-10,0,-10 1/1:30.7927:13:0:0:13:471:-10,-3.91339,0 0/1:99:21:11:406:10:379:-10,0,-10 0/1:99:44:21:743:23:848:-10,0,-10 0/0:59.0709:23:23:829:0:0:0,-6.92369,-10 0/1:99:30:11:417:19:697:-10,0,-10 0/0:28.9679:13:13:488:0:0:0,-3.91339,-10 0/1:99:24:15:562:9:342:-10,0,-10 0/0:41.0091:17:17:616:0:0:0,-5.11751,-10 0/0:53.0503:21:21:765:0:0:0,-6.32163,-10 0/0:50.04:20:20:720:0:0:0,-6.0206,-10 0/0:44.0194:18:18:667:0:0:0,-5.41854,-10 0/0:37.9988:16:16:559:0:0:0,-4.81648,-10 0/0:98.2068:36:36:1310:0:0:0,-10,-10 0/0:19.937:10:10:378:0:0:0,-3.0103,-10 0/0:16.9267:9:9:314:0:0:0,-2.70927,-10 0/0:68.1019:26:26:950:0:0:0,-7.82678,-10 1/1:27.7824:12:0:0:12:454:-10,-3.61236,0 1/1:60.8957:23:0:0:23:864:-10,-6.92369,0 0/0:16.9267:9:9:308:0:0:0,-2.70927,-10 1/1:18.7515:9:0:0:9:338:-10,-2.70927,0 0/1:99:23:11:401:12:452:-10,0,-10 0/0:44.0194:18:18:652:0:0:0,-5.41854,-10 0/1:99:14:5:190:9:318:-10,0,-10 0/0:77.1328:29:29:1073:0:0:0,-8.72987,-10 0/0:22.9473:11:11:403:0:0:0,-3.31133,-10 0/0:31.9782:14:14:521:0:0:0,-4.21442,-10 0/1:99:30:18:679:12:451:-10,0,-10 0/1:99:13:7:241:6:225:-10,0,-10 0/0:50.04:20:20:725:0:0:0,-6.0206,-10 0/0:41.9296:34:33:1166:1:38:0,-4.90354,-10 0/0:74.1224:28:28:1016:0:0:0,-8.42884,-10 0/0:25.9576:12:12:454:0:0:0,-3.61236,-10 0/0:47.0297:19:19:671:0:0:0,-5.71957,-10 0/0:44.0194:18:18:669:0:0:0,-5.41854,-10 0/0:86.1638:32:32:1175:0:0:0,-9.63296,-10 0/0:41.0091:17:17:633:0:0:0,-5.11751,-10 0/0:16.9267:9:9:338:0:0:0,-2.70927,-10 0/0:60.699:33:32:1153:1:16:0,-6.81548,-10 0/0:28.9679:13:13:455:0:0:0,-3.91339,-10 0/1:99:24:11:387:13:494:-10,0,-10 0/0:37.9988:16:16:567:0:0:0,-4.81648,-10 1/1:39.8236:16:0:0:16:580:-10,-4.81648,0 1/1:30.7927:13:0:0:13:475:-10,-3.91339,0 1/1:90.9978:33:0:0:33:1226:-10,-9.93399,0 1/1:51.8648:20:0:0:20:746:-10,-6.0206,0 1/1:84.9779:31:0:0:31:1154:-10,-9.33193,0 0/1:99:20:12:424:8:278:-10,0,-10 1/1:18.7515:9:0:0:9:314:-10,-2.70927,0 1/1:97.0158:35:0:0:35:1296:-10,-10,0 1/1:63.906:24:0:0:24:890:-10,-7.22472,0 1/1:33.803:14:0:0:14:529:-10,-4.21442,0 1/1:78.9575:29:0:0:29:1078:-10,-8.72987,0 1/1:30.7927:13:0:0:13:494:-10,-3.91339,0 0/0:37.9988:16:16:573:0:0:0,-4.81648,-10 0/1:99:26:12:438:14:529:-10,0,-10 0/1:99:32:14:496:18:682:-10,0,-10 1/1:24.7721:11:0:0:11:415:-10,-3.31133,0 1/1:57.8854:22:0:0:22:811:-10,-6.62266,0 1/1:36.8133:15:0:0:15:564:-10,-4.51545,0 1/1:30.7927:13:0:0:13:489:-10,-3.91339,0 1/1:30.7927:13:0:0:13:493:-10,-3.91339,0 1/1:9.72058:6:0:0:6:228:-10,-1.80618,0 1/1:33.803:14:0:0:14:518:-10,-4.21442,0 1/1:99:41:0:0:40:1496:-10,-10,0 1/1:66.9163:25:0:0:25:909:-10,-7.52575,0 1/1:60.8957:23:0:0:23:856:-10,-6.92369,0 0/1:99:25:12:451:13:490:-10,0,-10 1/1:33.803:14:0:0:14:516:-10,-4.21442,0 1/1:12.7309:7:0:0:7:266:-10,-2.10721,0 0/0:16.9267:9:9:309:0:0:0,-2.70927,-10 0/0:19.937:10:10:370:0:0:0,-3.0103,-10 1/1:24.7721:11:0:0:11:417:-10,-3.31133,0 1/1:63.906:24:0:0:24:844:-10,-7.22472,0 1/1:63.906:24:0:0:24:889:-10,-7.22472,0 1/1:36.8133:15:0:0:15:561:-10,-4.51545,0 scaffold_198 701049 . T A 2454.3 . AB=0.579439;ABP=8.8753;AC=6;AF=0.0326087;AN=184;AO=92;CIGAR=1X;DP=2420;DPB=2420;DPRA=1.02834;EPP=3.0103;EPPR=3.74221;GTI=1;LEN=1;MEANALT=1;MQM=59.4348;MQMR=59.9918;NS=92;NUMALT=1;ODDS=0.385057;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3355;QR=85356;RO=2326;RPP=202.786;RPPR=5053.86;RUN=1;SAF=46;SAP=3.0103;SAR=46;SRF=1149;SRP=3.74221;SRR=1177;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.0762:20:19:676:0:0:0,-5.71957,-10 0/1:2.25022:15:0:0:15:568:-10,-4.51545,0 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:69.0659:18:18:658:0:0:0,-5.41854,-10 0/1:99:30:13:454:17:641:-10,0,-10 0/0:63.0454:16:16:580:0:0:0,-4.81648,-10 0/0:99:39:39:1450:0:0:0,-10,-10 0/0:99:42:42:1554:0:0:0,-10,-10 0/0:84.1173:23:23:863:0:0:0,-6.92369,-10 0/0:41.9733:9:9:341:0:0:0,-2.70927,-10 0/0:47.9939:11:11:414:0:0:0,-3.31133,-10 0/0:51.0042:12:12:424:0:0:0,-3.61236,-10 0/0:99:43:43:1539:0:0:0,-10,-10 0/0:99:39:39:1468:0:0:0,-10,-10 0/0:99:48:48:1746:0:0:0,-10,-10 0/0:99:44:44:1650:0:0:0,-10,-10 0/0:99:32:32:1194:0:0:0,-9.63296,-10 0/0:57.0248:14:14:530:0:0:0,-4.21442,-10 0/0:81.1071:22:22:788:0:0:0,-6.62266,-10 0/0:99:45:45:1651:0:0:0,-10,-10 0/0:84.1173:23:23:786:0:0:0,-6.92369,-10 0/0:99:31:31:1170:0:0:0,-9.33193,-10 0/0:51.0042:12:12:453:0:0:0,-3.61236,-10 0/0:99:36:36:1348:0:0:0,-10,-10 0/0:78.0968:21:21:762:0:0:0,-6.32163,-10 0/0:96.1559:27:27:1020:0:0:0,-8.12781,-10 0/0:99:34:34:1245:0:0:0,-10,-10 0/0:72.0762:19:19:709:0:0:0,-5.71957,-10 0/0:99:37:37:1353:0:0:0,-10,-10 0/0:99:45:45:1668:0:0:0,-10,-10 0/0:47.9939:11:11:414:0:0:0,-3.31133,-10 0/0:41.9733:9:9:330:0:0:0,-2.70927,-10 0/0:81.1071:22:22:786:0:0:0,-6.62266,-10 0/0:63.0454:16:16:604:0:0:0,-4.81648,-10 0/0:99:33:33:1243:0:0:0,-9.93399,-10 0/0:32.9424:6:6:203:0:0:0,-1.80618,-10 0/0:75.0865:20:20:719:0:0:0,-6.0206,-10 0/0:99:45:45:1632:0:0:0,-10,-10 0/0:60.0351:15:15:564:0:0:0,-4.51545,-10 0/0:66.0556:17:17:616:0:0:0,-5.11751,-10 0/0:87.1279:24:24:898:0:0:0,-7.22472,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:78.0968:22:21:775:0:0:0,-6.32163,-10 0/0:99:39:39:1468:0:0:0,-10,-10 0/0:99:41:41:1493:0:0:0,-10,-10 0/0:63.0454:16:16:603:0:0:0,-4.81648,-10 0/0:99:67:67:2454:0:0:0,-10,-10 0/0:99:38:38:1406:0:0:0,-10,-10 0/0:72.0762:19:19:685:0:0:0,-5.71957,-10 0/0:99:41:41:1484:0:0:0,-10,-10 0/0:57.0248:14:14:504:0:0:0,-4.21442,-10 0/0:99:30:30:1070:0:0:0,-9.0309,-10 0/0:51.0042:12:12:454:0:0:0,-3.61236,-10 0/0:41.9733:9:9:331:0:0:0,-2.70927,-10 0/0:99:52:52:1909:0:0:0,-10,-10 0/0:75.0865:20:20:732:0:0:0,-6.0206,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:44.9836:10:10:362:0:0:0,-3.0103,-10 0/0:51.0042:12:12:398:0:0:0,-3.61236,-10 0/0:54.0145:13:13:489:0:0:0,-3.91339,-10 0/0:99:41:41:1510:0:0:0,-10,-10 0/0:87.1279:24:24:871:0:0:0,-7.22472,-10 0/0:99:50:50:1803:0:0:0,-10,-10 0/0:72.0762:19:19:717:0:0:0,-5.71957,-10 0/0:63.0454:16:16:580:0:0:0,-4.81648,-10 0/1:99:56:29:1037:27:990:-10,0,-10 0/0:84.1173:23:23:859:0:0:0,-6.92369,-10 0/0:60.0351:15:15:547:0:0:0,-4.51545,-10 0/0:99:40:40:1413:0:0:0,-10,-10 0/0:84.1173:23:23:858:0:0:0,-6.92369,-10 0/0:75.0865:20:20:709:0:0:0,-6.0206,-10 0/0:99:49:49:1816:0:0:0,-10,-10 0/0:72.0762:19:19:708:0:0:0,-5.71957,-10 0/0:66.0094:26:25:933:1:16:0,-4.81181,-10 0/0:99:33:33:1238:0:0:0,-9.93399,-10 0/0:69.0659:18:18:647:0:0:0,-5.41854,-10 0/0:90.1374:25:25:934:0:0:0,-7.52575,-10 0/0:78.0968:21:21:788:0:0:0,-6.32163,-10 0/0:32.9424:6:6:226:0:0:0,-1.80618,-10 0/0:60.0351:15:15:566:0:0:0,-4.51545,-10 0/0:99:50:50:1874:0:0:0,-10,-10 0/0:99:33:33:1194:0:0:0,-9.93399,-10 0/0:99:28:28:1019:0:0:0,-8.42884,-10 0/0:99:31:31:1122:0:0:0,-9.33193,-10 0/0:96.1559:27:27:981:0:0:0,-8.12781,-10 0/0:60.0351:15:15:562:0:0:0,-4.51545,-10 0/0:99:33:33:1182:0:0:0,-9.93399,-10 0/0:69.0659:18:18:619:0:0:0,-5.41854,-10 0/1:89.2658:6:3:114:3:114:-10,0,-10 0/0:90.1374:25:25:883:0:0:0,-7.52575,-10 1/1:47.9311:29:0:0:29:1026:-10,-8.72987,0 0/0:66.0556:17:17:627:0:0:0,-5.11751,-10 scaffold_198 723800 . TCTCA T 676.216 . AB=0.622222;ABP=8.84915;AC=2;AF=0.0108696;AN=184;AO=28;CIGAR=1M4D1M;DP=2068;DPB=2050.33;DPRA=1.00099;EPP=5.80219;EPPR=3.32174;GTI=1;LEN=4;MEANALT=1;MQM=60;MQMR=59.9593;NS=92;NUMALT=1;ODDS=4.79244;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=75;PRO=2;QA=1022;QR=73570;RO=2015;RPP=63.8115;RPPR=4378.53;RUN=1;SAF=17;SAP=5.80219;SAR=11;SRF=1016;SRP=3.32174;SRR=999;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:87.8529:22:22:805:0:0:0,-6.62266,-10 0|0:45.7085:8:8:281:0:0:0,-2.40824,-10 0|0:99:26:26:940:0:0:0,-7.82678,-10 0|0:78.8219:19:19:705:0:0:0,-5.71957,-10 0|0:66.7806:15:15:532:0:0:0,-4.51545,-10 0|0:60.76:13:13:457:0:0:0,-3.91339,-10 0|0:99:41:40:1468:0:0:0,-10,-10 0|0:99:29:29:1059:0:0:0,-8.72987,-10 0|0:72.8012:17:17:617:0:0:0,-5.11751,-10 0|0:30.657:3:3:114:0:0:0,-0.90309,-10 0|0:45.7085:8:8:298:0:0:0,-2.40824,-10 0|0:60.76:13:13:448:0:0:0,-3.91339,-10 0|0:87.8529:22:22:794:0:0:0,-6.62266,-10 0|0:99:32:32:1146:0:0:0,-9.63296,-10 0|0:99:26:26:948:0:0:0,-7.82678,-10 0|0:99:29:29:1063:0:0:0,-8.72987,-10 0|0:99:28:28:1026:0:0:0,-8.42884,-10 0|0:63.7703:14:14:495:0:0:0,-4.21442,-10 0|0:78.8219:19:19:686:0:0:0,-5.71957,-10 0|0:99:42:41:1447:0:0:0,-10,-10 0|0:75.8115:20:18:658:0:0:0,-5.41854,-10 0|0:99:35:35:1308:0:0:0,-10,-10 0|0:36.6776:5:5:188:0:0:0,-1.50515,-10 0|0:99:34:32:1193:0:0:0,-9.63296,-10 0|0:60.76:13:13:482:0:0:0,-3.91339,-10 0|0:99:27:27:980:0:0:0,-8.12781,-10 0|0:72.8012:17:17:632:0:0:0,-5.11751,-10 0|0:78.8219:19:19:665:0:0:0,-5.71957,-10 0|0:93.8716:25:24:872:0:0:0,-7.22472,-10 0|0:99:38:38:1371:0:0:0,-10,-10 0|0:51.7291:10:10:374:0:0:0,-3.0103,-10 0|0:60.76:13:13:483:0:0:0,-3.91339,-10 0|0:93.8716:24:24:883:0:0:0,-7.22472,-10 0|0:39.6879:8:6:226:0:0:0,-1.80618,-10 0|0:66.7806:15:15:546:0:0:0,-4.51545,-10 0|0:45.7085:8:8:290:0:0:0,-2.40824,-10 0|0:63.7703:14:14:507:0:0:0,-4.21442,-10 0|0:99:30:30:1081:0:0:0,-9.0309,-10 0|0:78.8219:20:19:672:0:0:0,-5.71957,-10 0|0:66.7806:15:15:537:0:0:0,-4.51545,-10 0|0:99:31:31:1151:0:0:0,-9.33193,-10 0|0:81.832:20:20:725:0:0:0,-6.0206,-10 0|0:93.8716:24:24:851:0:0:0,-7.22472,-10 0|0:99:36:35:1276:0:0:0,-10,-10 0|0:99:33:31:1145:0:0:0,-9.33193,-10 0|0:72.8012:17:17:614:0:0:0,-5.11751,-10 0|0:99:37:37:1353:0:0:0,-10,-10 0|0:99:31:30:1114:0:0:0,-9.0309,-10 0|0:78.8219:19:19:702:0:0:0,-5.71957,-10 0|0:99:51:51:1862:0:0:0,-10,-10 0|0:69.7909:16:16:581:0:0:0,-4.81648,-10 0|0:99:38:38:1325:0:0:0,-10,-10 0|0:72.8012:18:17:613:0:0:0,-5.11751,-10 0|0:45.7085:8:8:287:0:0:0,-2.40824,-10 0|0:99:59:58:2110:0:0:0,-10,-10 0|0:66.7806:15:15:561:0:0:0,-4.51545,-10 0|0:99:29:29:1072:0:0:0,-8.72987,-10 0|0:57.7497:12:12:441:0:0:0,-3.61236,-10 0|0:72.8012:17:17:632:0:0:0,-5.11751,-10 0|0:51.7291:10:10:377:0:0:0,-3.0103,-10 0|0:99:44:44:1629:0:0:0,-10,-10 0|0:84.8422:22:21:787:0:0:0,-6.32163,-10 0|0:99:39:39:1460:0:0:0,-10,-10 0|0:99:32:32:1173:0:0:0,-9.63296,-10 0|0:48.7188:9:9:318:0:0:0,-2.70927,-10 0|0:99:35:35:1295:0:0:0,-10,-10 0|0:99:32:32:1167:0:0:0,-9.63296,-10 0|0:75.8115:18:18:656:0:0:0,-5.41854,-10 0|0:99:34:34:1252:0:0:0,-10,-10 0|0:81.832:20:20:740:0:0:0,-6.0206,-10 0|0:63.7703:14:14:523:0:0:0,-4.21442,-10 0|0:99:47:46:1710:0:0:0,-10,-10 0|0:99:27:27:995:0:0:0,-8.12781,-10 0|1:0.0357987:17:0:0:17:620:-10,-5.11751,0 0|1:99:28:17:630:11:402:-10,0,-10 0|0:45.7085:9:8:285:0:0:0,-2.40824,-10 0|0:75.8115:18:18:662:0:0:0,-5.41854,-10 0|0:54.7394:11:11:417:0:0:0,-3.31133,-10 0|0:45.7085:8:8:298:0:0:0,-2.40824,-10 0|0:84.8422:21:21:791:0:0:0,-6.32163,-10 0|0:99:35:34:1189:0:0:0,-10,-10 0|0:99:27:26:946:0:0:0,-7.82678,-10 0|0:96.8802:25:25:945:0:0:0,-7.52575,-10 0|0:90.8622:23:23:813:0:0:0,-6.92369,-10 0|0:99:30:30:1113:0:0:0,-9.0309,-10 0|0:36.6776:5:5:189:0:0:0,-1.50515,-10 0|0:72.8012:17:17:622:0:0:0,-5.11751,-10 0|0:72.8012:19:17:615:0:0:0,-5.11751,-10 0|0:36.6776:5:5:179:0:0:0,-1.50515,-10 0|0:78.8219:20:19:677:0:0:0,-5.71957,-10 0|0:75.8115:19:18:678:0:0:0,-5.41854,-10 0|0:84.8422:21:21:747:0:0:0,-6.32163,-10 scaffold_198 754199 . C T 910.734 . AB=0.375;ABP=7.35324;AC=4;AF=0.0217391;AN=184;AO=38;CIGAR=1X;DP=2121;DPB=2121;DPRA=0.918468;EPP=5.06748;EPPR=13.2276;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9942;NS=92;NUMALT=1;ODDS=1.40849;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1393;QR=72153;RO=2083;RPP=85.5263;RPPR=4517.51;RUN=1;SAF=16;SAP=5.06748;SAR=22;SRF=1090;SRP=12.8189;SRR=993;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.655:14:14:483:0:0:0,-4.21442,-10 0/0:70.6447:13:13:416:0:0:0,-3.91339,-10 0/0:99:31:31:1109:0:0:0,-9.33193,-10 0/0:79.6756:16:16:529:0:0:0,-4.81648,-10 0/1:98.769:8:4:129:4:148:-10,0,-10 0/0:52.5829:7:7:242:0:0:0,-2.10721,-10 1/1:7.0682:25:0:0:25:919:-10,-7.52575,0 0/0:82.6858:17:17:577:0:0:0,-5.11751,-10 0/0:99:25:25:857:0:0:0,-7.52575,-10 0/0:37.5314:2:2:76:0:0:0,-0.60206,-7.22 0/0:52.5829:7:7:226:0:0:0,-2.10721,-10 0/0:52.5829:7:7:262:0:0:0,-2.10721,-10 0/0:99:36:36:1257:0:0:0,-10,-10 0/0:99:32:32:1132:0:0:0,-9.63296,-10 0/0:99:42:42:1446:0:0:0,-10,-10 0/0:99:38:38:1273:0:0:0,-10,-10 0/1:99:24:16:560:8:291:-10,0,-10 0/0:76.6653:15:15:521:0:0:0,-4.51545,-10 0/0:99:24:24:826:0:0:0,-7.22472,-10 0/0:99:34:34:1169:0:0:0,-10,-10 0/0:94.7284:21:21:720:0:0:0,-6.32163,-10 0/0:99:41:41:1375:0:0:0,-10,-10 0/0:70.6447:13:13:463:0:0:0,-3.91339,-10 0/0:68.8022:28:27:948:1:35:0,-3.48168,-10 0/0:99:27:27:944:0:0:0,-8.12781,-10 0/0:99:25:25:883:0:0:0,-7.52575,-10 0/0:97.7342:22:22:774:0:0:0,-6.62266,-10 0/0:82.6858:17:17:551:0:0:0,-5.11751,-10 0/0:88.7061:19:19:653:0:0:0,-5.71957,-10 0/0:99:41:41:1351:0:0:0,-10,-10 0/0:49.5726:6:6:214:0:0:0,-1.80618,-10 0/0:49.5726:6:6:212:0:0:0,-1.80618,-10 0/0:82.6858:17:17:593:0:0:0,-5.11751,-10 0/0:73.655:14:14:513:0:0:0,-4.21442,-10 0/0:88.7061:19:19:627:0:0:0,-5.71957,-10 0/0:79.6756:16:16:525:0:0:0,-4.81648,-10 0/0:73.655:14:14:475:0:0:0,-4.21442,-10 0/0:99:46:46:1564:0:0:0,-10,-10 0/0:82.6858:17:17:569:0:0:0,-5.11751,-10 0/0:73.655:14:14:503:0:0:0,-4.21442,-10 0/0:99:37:37:1273:0:0:0,-10,-10 0/0:94.7284:21:21:719:0:0:0,-6.32163,-10 0/0:91.7175:20:20:722:0:0:0,-6.0206,-10 0/0:99:40:40:1411:0:0:0,-10,-10 0/0:99:27:27:966:0:0:0,-8.12781,-10 0/0:70.6447:13:13:463:0:0:0,-3.91339,-10 0/0:99:35:35:1180:0:0:0,-10,-10 0/0:99:35:35:1249:0:0:0,-10,-10 0/0:79.6756:16:16:546:0:0:0,-4.81648,-10 0/0:99:30:30:1054:0:0:0,-9.0309,-10 0/0:73.655:14:14:508:0:0:0,-4.21442,-10 0/0:99:45:45:1558:0:0:0,-10,-10 0/0:91.7175:20:20:679:0:0:0,-6.0206,-10 0/0:52.5829:7:7:254:0:0:0,-2.10721,-10 0/0:99:62:62:2183:0:0:0,-10,-10 0/0:91.7175:20:20:707:0:0:0,-6.0206,-10 0/0:99:30:30:988:0:0:0,-9.0309,-10 0/0:55.5932:8:8:291:0:0:0,-2.40824,-10 0/0:91.7175:20:20:676:0:0:0,-6.0206,-10 0/0:94.7284:21:21:724:0:0:0,-6.32163,-10 0/0:99:53:53:1863:0:0:0,-10,-10 0/0:99:26:26:911:0:0:0,-7.82678,-10 0/0:99:45:45:1516:0:0:0,-10,-10 0/0:85.696:18:18:540:0:0:0,-5.41854,-10 0/0:99:27:27:935:0:0:0,-8.12781,-10 0/0:99:38:38:1324:0:0:0,-10,-10 0/0:99:24:24:812:0:0:0,-7.22472,-10 0/0:49.5726:6:6:198:0:0:0,-1.80618,-10 0/0:99:52:52:1815:0:0:0,-10,-10 0/0:46.5623:5:5:180:0:0:0,-1.50515,-10 0/0:82.6858:17:17:606:0:0:0,-5.11751,-10 0/0:99:37:37:1274:0:0:0,-10,-10 0/0:99:29:29:942:0:0:0,-8.72987,-10 0/0:79.6756:16:16:595:0:0:0,-4.81648,-10 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/0:79.6756:16:16:494:0:0:0,-4.81648,-10 0/0:64.6241:11:11:391:0:0:0,-3.31133,-10 0/0:82.6858:17:17:575:0:0:0,-5.11751,-10 0/0:58.6035:9:9:333:0:0:0,-2.70927,-10 0/0:76.6653:15:15:561:0:0:0,-4.51545,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:99:39:39:1380:0:0:0,-10,-10 0/0:99:25:25:823:0:0:0,-7.52575,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:99:32:32:1110:0:0:0,-9.63296,-10 0/0:61.6138:10:10:380:0:0:0,-3.0103,-10 0/0:99:23:23:782:0:0:0,-6.92369,-10 0/0:79.6756:16:16:593:0:0:0,-4.81648,-10 0/0:46.5623:5:5:186:0:0:0,-1.50515,-10 0/0:91.7175:20:20:734:0:0:0,-6.0206,-10 0/0:88.7061:19:19:652:0:0:0,-5.71957,-10 0/0:85.696:18:18:617:0:0:0,-5.41854,-10 scaffold_198 756707 . T G 405.568 . AB=0.740741;ABP=16.6021;AC=2;AF=0.0108696;AN=184;AO=21;CIGAR=1X;DP=1332;DPB=1332;DPRA=1.20521;EPP=8.07707;EPPR=8.59503;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9373;NS=92;NUMALT=1;ODDS=5.01107;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=684;QR=47519;RO=1308;RPP=48.6112;RPPR=2843.3;RUN=1;SAF=14;SAP=8.07707;SAR=7;SRF=683;SRP=8.59503;SRR=625;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.000532725:10:0:0:10:368:-10,-3.0103,0 0/0:30.8513:4:4:152:0:0:0,-1.20412,-10 0/1:99:17:7:243:10:302:-10,0,-10 0/0:42.8925:8:8:291:0:0:0,-2.40824,-10 0/0:57.944:13:13:471:0:0:0,-3.91339,-10 0/0:51.9234:11:11:382:0:0:0,-3.31133,-10 0/0:71.4611:25:24:826:1:14:0,-4.72781,-10 0/0:72.9955:18:18:650:0:0:0,-5.41854,-10 0/0:54.9337:12:12:443:0:0:0,-3.61236,-10 0/0:21.8204:1:1:38:0:0:0,-0.30103,-3.8 0/0:42.8925:8:8:295:0:0:0,-2.40824,-10 0/0:48.9131:10:10:335:0:0:0,-3.0103,-10 0/0:97.0787:26:26:973:0:0:0,-7.82678,-10 0/0:99:30:30:1099:0:0:0,-9.0309,-10 0/0:69.9851:17:17:644:0:0:0,-5.11751,-10 0/0:85.0367:22:22:792:0:0:0,-6.62266,-10 0/0:88.0471:24:23:861:0:0:0,-6.92369,-10 0/0:39.8822:7:7:265:0:0:0,-2.10721,-10 0/0:66.9749:16:16:599:0:0:0,-4.81648,-10 0/0:88.0471:23:23:841:0:0:0,-6.92369,-10 0/0:51.9234:11:11:387:0:0:0,-3.31133,-10 0/0:85.0367:22:22:803:0:0:0,-6.62266,-10 0/0:39.8822:7:7:250:0:0:0,-2.10721,-10 0/0:66.9749:16:16:595:0:0:0,-4.81648,-10 0/0:60.9543:14:14:481:0:0:0,-4.21442,-10 0/0:72.9955:18:18:681:0:0:0,-5.41854,-10 0/0:60.9543:14:14:517:0:0:0,-4.21442,-10 0/0:51.9234:11:11:375:0:0:0,-3.31133,-10 0/0:42.8925:8:8:282:0:0:0,-2.40824,-10 0/0:66.9749:17:16:563:0:0:0,-4.81648,-10 0/0:30.8513:4:4:150:0:0:0,-1.20412,-10 0/0:39.8822:7:7:244:0:0:0,-2.10721,-10 0/0:45.9028:9:9:332:0:0:0,-2.70927,-10 0/0:30.8513:4:4:152:0:0:0,-1.20412,-10 0/0:63.9646:15:15:537:0:0:0,-4.51545,-10 0/0:30.8513:4:4:148:0:0:0,-1.20412,-10 0/0:42.8925:8:8:263:0:0:0,-2.40824,-10 0/0:63.9646:15:15:546:0:0:0,-4.51545,-10 0/0:72.9955:18:18:634:0:0:0,-5.41854,-10 0/0:66.9749:16:16:590:0:0:0,-4.81648,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:57.944:13:13:434:0:0:0,-3.91339,-10 0/0:63.9646:15:15:513:0:0:0,-4.51545,-10 0/0:85.0367:22:22:806:0:0:0,-6.62266,-10 0/0:72.9955:18:18:677:0:0:0,-5.41854,-10 0/0:54.9337:12:12:451:0:0:0,-3.61236,-10 0/0:99:36:36:1316:0:0:0,-10,-10 0/0:66.9749:16:16:586:0:0:0,-4.81648,-10 0/0:48.9131:10:10:378:0:0:0,-3.0103,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:54.9337:12:12:421:0:0:0,-3.61236,-10 0/0:60.9543:14:14:502:0:0:0,-4.21442,-10 0/0:54.9337:12:12:455:0:0:0,-3.61236,-10 0/0:36.8719:6:6:224:0:0:0,-1.80618,-10 0/0:99:37:37:1319:0:0:0,-10,-10 0/0:42.8925:8:8:293:0:0:0,-2.40824,-10 0/0:60.9543:14:14:503:0:0:0,-4.21442,-10 0/0:42.8925:8:8:244:0:0:0,-2.40824,-10 0/0:54.9337:12:12:434:0:0:0,-3.61236,-10 0/0:39.8822:7:7:257:0:0:0,-2.10721,-10 0/0:79.016:20:20:751:0:0:0,-6.0206,-10 0/0:39.8822:7:7:263:0:0:0,-2.10721,-10 0/0:79.016:21:20:741:0:0:0,-6.0206,-10 0/0:63.9646:15:15:539:0:0:0,-4.51545,-10 0/0:33.8616:5:5:188:0:0:0,-1.50515,-10 0/0:76.0057:19:19:706:0:0:0,-5.71957,-10 0/0:66.9749:16:16:606:0:0:0,-4.81648,-10 0/0:45.9028:9:9:316:0:0:0,-2.70927,-10 0/0:69.9851:17:17:637:0:0:0,-5.11751,-10 0/0:33.8616:5:5:181:0:0:0,-1.50515,-10 0/0:60.9543:14:14:490:0:0:0,-4.21442,-10 0/0:76.0057:19:19:703:0:0:0,-5.71957,-10 0/0:91.0568:24:24:902:0:0:0,-7.22472,-10 0/0:63.9646:15:15:562:0:0:0,-4.51545,-10 0/0:60.9543:14:14:523:0:0:0,-4.21442,-10 0/0:45.9028:9:9:342:0:0:0,-2.70927,-10 0/0:57.944:13:13:484:0:0:0,-3.91339,-10 0/0:51.9234:11:11:411:0:0:0,-3.31133,-10 0/0:30.8513:4:4:148:0:0:0,-1.20412,-10 0/0:48.9131:10:10:368:0:0:0,-3.0103,-10 0/0:99:34:34:1164:0:0:0,-10,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:48.9131:10:10:362:0:0:0,-3.0103,-10 0/0:51.9234:11:11:391:0:0:0,-3.31133,-10 0/0:54.9337:12:12:442:0:0:0,-3.61236,-10 0/0:36.8719:6:6:208:0:0:0,-1.80618,-10 0/0:82.0264:21:21:730:0:0:0,-6.32163,-10 0/0:42.8925:8:8:301:0:0:0,-2.40824,-10 0/0:54.9337:12:12:430:0:0:0,-3.61236,-10 0/0:72.9955:18:18:653:0:0:0,-5.41854,-10 0/0:82.0264:21:21:783:0:0:0,-6.32163,-10 0/0:42.8925:8:8:298:0:0:0,-2.40824,-10 scaffold_198 762483 . G C 166.431 . AB=0.380952;ABP=5.59539;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=2083;DPB=2083;DPRA=1.0388;EPP=3.25157;EPPR=7.57542;GTI=0;LEN=1;MEANALT=1;MQM=57;MQMR=59.8885;NS=92;NUMALT=1;ODDS=14.489;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=309;QR=75948;RO=2072;RPP=22.5536;RPPR=4476.28;RUN=1;SAF=5;SAP=3.25157;SAR=4;SRF=1004;SRP=7.30294;SRR=1068;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:21:21:769:0:0:0,-6.32163,-10 0/0:80.9866:10:10:354:0:0:0,-3.0103,-10 0/0:90.0171:13:13:475:0:0:0,-3.91339,-10 0/0:99:16:16:579:0:0:0,-4.81648,-10 0/0:99:16:16:584:0:0:0,-4.81648,-10 0/0:71.9557:7:7:265:0:0:0,-2.10721,-10 0/0:99:38:38:1431:0:0:0,-10,-10 0/0:99:36:35:1281:0:0:0,-10,-10 0/0:96.0364:15:15:555:0:0:0,-4.51545,-10 0/0:65.9351:5:5:183:0:0:0,-1.50515,-10 0/0:80.9866:10:10:364:0:0:0,-3.0103,-10 0/0:77.9763:9:9:316:0:0:0,-2.70927,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:99:35:35:1278:0:0:0,-10,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:99:35:35:1322:0:0:0,-10,-10 0/0:99:29:29:1048:0:0:0,-8.72987,-10 0/0:83.9968:11:11:391:0:0:0,-3.31133,-10 0/0:99:31:31:1118:0:0:0,-9.33193,-10 0/0:99:43:43:1561:0:0:0,-10,-10 0/0:99:27:27:950:0:0:0,-8.12781,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:62.9248:4:4:149:0:0:0,-1.20412,-10 0/0:99:21:21:792:0:0:0,-6.32163,-10 0/0:99:26:26:983:0:0:0,-7.82678,-10 0/0:99:31:31:1136:0:0:0,-9.33193,-10 0/0:99:20:20:707:0:0:0,-6.0206,-10 0/0:99:21:21:787:0:0:0,-6.32163,-10 0/0:99:16:16:596:0:0:0,-4.81648,-10 0/0:99:42:42:1573:0:0:0,-10,-10 0/0:65.9351:5:5:187:0:0:0,-1.50515,-10 0/0:83.9968:11:11:417:0:0:0,-3.31133,-10 0/0:99:24:24:867:0:0:0,-7.22472,-10 0/0:93.027:14:14:526:0:0:0,-4.21442,-10 0/0:96.9844:26:25:920:1:16:0,-4.81181,-10 0/0:65.9351:5:5:190:0:0:0,-1.50515,-10 0/0:99:17:17:593:0:0:0,-5.11751,-10 0/0:99:43:43:1580:0:0:0,-10,-10 0/0:99:16:16:563:0:0:0,-4.81648,-10 0/0:99:20:20:737:0:0:0,-6.0206,-10 0/0:99:47:47:1770:0:0:0,-10,-10 0/0:99:22:22:793:0:0:0,-6.62266,-10 0/0:99:17:17:620:0:0:0,-5.11751,-10 0/0:99:31:31:1171:0:0:0,-9.33193,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:99:16:16:604:0:0:0,-4.81648,-10 0/0:99:50:50:1794:0:0:0,-10,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:68.9454:6:6:222:0:0:0,-1.80618,-10 0/0:99:40:40:1457:0:0:0,-10,-10 0/0:74.966:8:8:304:0:0:0,-2.40824,-10 0/0:99:40:40:1488:0:0:0,-10,-10 0/0:99:16:16:569:0:0:0,-4.81648,-10 0/0:65.9351:5:5:189:0:0:0,-1.50515,-10 0/0:99:54:54:1905:0:0:0,-10,-10 0/0:99:19:19:689:0:0:0,-5.71957,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:71.9557:7:7:264:0:0:0,-2.10721,-10 0/0:99:24:24:874:0:0:0,-7.22472,-10 0/0:74.966:8:8:301:0:0:0,-2.40824,-10 0/0:99:40:40:1420:0:0:0,-10,-10 0/0:99:18:18:677:0:0:0,-5.41854,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:99:22:22:831:0:0:0,-6.62266,-10 0/0:96.0364:15:15:514:0:0:0,-4.51545,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:90.0171:13:13:489:0:0:0,-3.91339,-10 0/0:99:41:41:1512:0:0:0,-10,-10 0/0:77.9763:9:9:340:0:0:0,-2.70927,-10 0/0:93.027:14:14:469:0:0:0,-4.21442,-10 0/0:99:41:41:1457:0:0:0,-10,-10 0/1:99:21:13:477:8:293:-10,0,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:99:32:32:1179:0:0:0,-9.63296,-10 0/0:99:22:22:805:0:0:0,-6.62266,-10 0/0:96.0364:15:15:544:0:0:0,-4.51545,-10 0/0:83.9968:11:11:418:0:0:0,-3.31133,-10 0/0:68.9454:6:6:192:0:0:0,-1.80618,-10 0/0:80.9866:10:10:374:0:0:0,-3.0103,-10 0/0:99:35:35:1256:0:0:0,-10,-10 0/0:99:25:25:932:0:0:0,-7.52575,-10 0/0:99:26:26:937:0:0:0,-7.82678,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:99:26:25:909:0:0:0,-7.52575,-10 0/0:62.9248:4:4:147:0:0:0,-1.20412,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:99:19:19:685:0:0:0,-5.71957,-10 0/0:80.9866:10:10:380:0:0:0,-3.0103,-10 0/0:99:20:20:743:0:0:0,-6.0206,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:93.027:14:14:529:0:0:0,-4.21442,-10 scaffold_198 1262092 . G A 20664.3 . AB=0.540984;ABP=7.46004;AC=72;AF=0.391304;AN=184;AO=726;CIGAR=1X;DP=1919;DPB=1919;DPRA=0.897177;EPP=7.32932;EPPR=11.1811;GTI=4;LEN=1;MEANALT=1;MQM=59.9711;MQMR=59.9799;NS=92;NUMALT=1;ODDS=0.674985;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=26361;QR=43887;RO=1193;RPP=1536.37;RPPR=2490.39;RUN=1;SAF=349;SAP=5.35525;SAR=377;SRF=575;SRP=6.37581;SRR=618;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:31.8167:15:0:0:15:551:-10,-4.51545,0 1/1:16.7652:10:0:0:10:354:-10,-3.0103,0 1/1:67.9403:27:0:0:27:950:-10,-8.12781,0 0/0:72.1299:24:24:897:0:0:0,-7.22472,-10 1/1:25.7961:13:0:0:13:480:-10,-3.91339,0 1/1:28.8064:14:0:0:14:470:-10,-4.21442,0 1/1:99:43:0:0:43:1557:-10,-10,0 1/1:98.0393:37:0:0:37:1344:-10,-10,0 1/1:19.7755:11:0:0:11:406:-10,-3.31133,0 0/1:0.568223:6:0:0:6:227:-10,-1.80618,0 1/1:25.7961:13:0:0:13:494:-10,-3.91339,0 0/1:0.274825:5:0:0:5:187:-10,-1.50515,0 0/1:99:31:12:443:19:678:-10,0,-10 1/1:92.0217:35:0:0:35:1294:-10,-10,0 0/0:63.0991:21:21:774:0:0:0,-6.32163,-10 0/0:69.1197:23:23:859:0:0:0,-6.92369,-10 0/1:99:28:17:628:11:387:-10,0,-10 1/1:25.7961:13:0:0:13:491:-10,-3.91339,0 0/0:72.1299:24:24:898:0:0:0,-7.22472,-10 0/0:99:36:36:1304:0:0:0,-10,-10 0/0:45.0373:15:15:535:0:0:0,-4.51545,-10 0/0:60.0888:20:20:711:0:0:0,-6.0206,-10 0/0:26.9755:9:9:326:0:0:0,-2.70927,-10 0/0:69.1197:23:23:852:0:0:0,-6.92369,-10 0/0:72.1299:24:24:861:0:0:0,-7.22472,-10 0/0:81.1608:27:27:1026:0:0:0,-8.12781,-10 0/0:81.1608:27:27:1014:0:0:0,-8.12781,-10 0/0:39.0167:13:13:452:0:0:0,-3.91339,-10 0/0:66.1094:22:22:827:0:0:0,-6.62266,-10 0/0:99:40:40:1427:0:0:0,-10,-10 0/0:20.9549:7:7:261:0:0:0,-2.10721,-10 0/0:45.0373:15:15:517:0:0:0,-4.51545,-10 0/0:69.1197:23:23:822:0:0:0,-6.92369,-10 0/0:26.9755:9:9:330:0:0:0,-2.70927,-10 1/1:49.8785:21:0:0:21:769:-10,-6.32163,0 0/0:8.91366:3:3:114:0:0:0,-0.90309,-10 1/1:46.8682:20:0:0:20:756:-10,-6.0206,0 0/0:78.1505:26:26:919:0:0:0,-7.82678,-10 0/0:78.1505:26:26:954:0:0:0,-7.82678,-10 0/1:99:13:4:148:9:342:-10,0,-10 0/0:90.1911:30:30:1133:0:0:0,-9.0309,-10 0/0:60.0888:20:20:746:0:0:0,-6.0206,-10 0/0:60.0888:20:20:757:0:0:0,-6.0206,-10 0/1:99:19:9:329:10:367:-10,0,-10 0/1:99:26:14:497:12:454:-10,0,-10 0/0:48.0476:16:16:581:0:0:0,-4.81648,-10 0/0:99:42:42:1524:0:0:0,-10,-10 0/0:93.2008:31:31:1133:0:0:0,-9.33193,-10 0/0:63.0991:21:21:793:0:0:0,-6.32163,-10 0/0:99:36:36:1362:0:0:0,-10,-10 0/0:36.0064:12:12:429:0:0:0,-3.61236,-10 0/0:99:53:53:1967:0:0:0,-10,-10 0/0:26.9755:9:9:329:0:0:0,-2.70927,-10 0/0:29.9858:10:10:375:0:0:0,-3.0103,-10 0/0:99:39:39:1466:0:0:0,-10,-10 0/0:51.0579:17:17:643:0:0:0,-5.11751,-10 0/0:66.1094:22:22:804:0:0:0,-6.62266,-10 1/1:10.7446:8:0:0:8:304:-10,-2.40824,0 1/1:43.8579:19:0:0:19:688:-10,-5.71957,0 0/1:0.568223:6:0:0:6:227:-10,-1.80618,0 0/1:99:33:16:606:17:589:-10,0,-10 1/1:40.8476:18:0:0:18:668:-10,-5.41854,0 0/1:99:34:17:620:17:597:-10,0,-10 0/1:99:13:9:340:4:152:-10,0,-10 1/1:34.827:16:0:0:16:598:-10,-4.81648,0 1/1:98.0393:37:0:0:37:1313:-10,-10,0 1/1:46.8682:20:0:0:20:711:-10,-6.0206,0 1/1:13.7549:9:0:0:9:311:-10,-2.70927,0 1/1:99:39:0:0:39:1430:-10,-10,0 1/1:19.7755:11:0:0:11:378:-10,-3.31133,0 0/0:63.0991:21:21:752:0:0:0,-6.32163,-10 0/0:90.1911:30:30:1090:0:0:0,-9.0309,-10 0/0:60.0888:20:20:753:0:0:0,-6.0206,-10 0/0:51.0579:17:17:605:0:0:0,-5.11751,-10 0/0:99:33:33:1215:0:0:0,-9.93399,-10 1/1:10.7446:8:0:0:8:295:-10,-2.40824,0 0/0:32.9961:11:11:415:0:0:0,-3.31133,-10 1/1:43.8579:19:0:0:19:702:-10,-5.71957,0 0/0:26.9755:9:9:334:0:0:0,-2.70927,-10 0/0:39.0167:13:13:492:0:0:0,-3.91339,-10 0/0:93.2008:31:31:1142:0:0:0,-9.33193,-10 1/1:79.9814:31:0:0:31:1104:-10,-9.33193,0 0/1:99:20:7:242:13:481:-10,0,-10 1/1:34.827:16:0:0:16:595:-10,-4.81648,0 0/1:99:33:19:717:14:472:-10,0,-10 0/1:0.135239:4:0:0:4:152:-10,-1.20412,0 0/0:60.0888:20:20:754:0:0:0,-6.0206,-10 0/0:39.0167:13:13:459:0:0:0,-3.91339,-10 0/1:99:10:5:189:5:186:-10,0,-10 1/1:52.8888:22:0:0:22:801:-10,-6.62266,0 0/1:99:24:11:395:13:469:-10,0,-10 1/1:34.827:16:0:0:16:580:-10,-4.81648,0 scaffold_198 1313487 . A G 60098.2 . AB=0.35;ABP=10.8276;AC=177;AF=0.961957;AN=184;AO=2027;CIGAR=1X;DP=2122;DPB=2122;DPRA=0.915775;EPP=6.01951;EPPR=10.4949;GTI=2;LEN=1;MEANALT=1.01136;MQM=59.9635;MQMR=60;NS=92;NUMALT=1;ODDS=4.69774;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=73136;QR=3461;RO=94;RPP=4249.63;RPPR=207.129;RUN=1;SAF=1003;SAP=3.48273;SAR=1024;SRF=56;SRP=10.4949;SRR=38;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:79.5253:24:0:0:24:889:-10,-7.22472,0 1/1:43.4017:12:0:0:12:452:-10,-3.61236,0 1/1:67.4841:20:0:0:20:695:-10,-6.0206,0 1/1:52.4326:15:0:0:15:558:-10,-4.51545,0 1/1:43.4017:13:0:0:12:431:-10,-3.61236,0 1/1:40.3914:11:0:0:11:394:-10,-3.31133,0 1/1:99:41:0:0:41:1537:-10,-10,0 1/1:76.515:23:0:0:23:853:-10,-6.92369,0 1/1:52.4326:15:0:0:15:523:-10,-4.51545,0 0/1:0.00252857:7:7:242:0:0:0,-2.10721,-10 0/1:0.0101231:9:9:318:0:0:0,-2.70927,-10 1/1:43.4017:12:0:0:12:425:-10,-3.61236,0 1/1:99:35:0:0:35:1286:-10,-10,0 0/1:99:40:26:971:14:519:-10,0,-10 1/1:99:34:0:0:34:1236:-10,-10,0 1/1:99:40:0:0:40:1399:-10,-10,0 1/1:94.5732:29:0:0:29:1047:-10,-8.72987,0 1/1:43.4017:12:0:0:12:436:-10,-3.61236,0 1/1:58.4532:17:0:0:17:593:-10,-5.11751,0 1/1:99:62:0:0:62:2228:-10,-10,0 1/1:79.5253:24:0:0:24:874:-10,-7.22472,0 1/1:99:43:0:0:43:1498:-10,-10,0 1/1:61.4635:18:0:0:18:677:-10,-5.41854,0 1/1:99:35:0:0:35:1260:-10,-10,0 1/1:88.556:27:0:0:27:996:-10,-8.12781,0 1/1:99:37:0:0:37:1318:-10,-10,0 1/1:67.4841:20:0:0:20:741:-10,-6.0206,0 1/1:67.4841:20:0:0:20:692:-10,-6.0206,0 1/1:79.5253:24:0:0:24:890:-10,-7.22472,0 1/1:99:36:0:0:36:1312:-10,-10,0 1/1:34.3708:9:0:0:9:338:-10,-2.70927,0 1/1:34.3708:9:0:0:9:326:-10,-2.70927,0 1/1:58.4532:17:0:0:17:642:-10,-5.11751,0 1/1:25.3399:6:0:0:6:218:-10,-1.80618,0 1/1:94.5732:29:0:0:29:1058:-10,-8.72987,0 1/1:34.3708:9:0:0:9:313:-10,-2.70927,0 1/1:34.3708:9:0:0:9:314:-10,-2.70927,0 1/1:61.4635:18:0:0:18:644:-10,-5.41854,0 1/1:82.5354:25:0:0:25:930:-10,-7.52575,0 1/1:67.4841:20:0:0:20:699:-10,-6.0206,0 1/1:99:37:0:0:37:1294:-10,-10,0 1/1:79.5253:24:0:0:24:861:-10,-7.22472,0 1/1:82.5354:25:0:0:25:878:-10,-7.52575,0 1/1:99:36:0:0:36:1318:-10,-10,0 1/1:55.4429:16:0:0:16:586:-10,-4.81648,0 1/1:82.5354:25:0:0:25:866:-10,-7.52575,0 1/1:99:47:0:0:47:1711:-10,-10,0 1/1:82.5354:25:0:0:25:923:-10,-7.52575,0 1/1:58.4532:17:0:0:17:630:-10,-5.11751,0 1/1:94.5732:29:0:0:29:1016:-10,-8.72987,0 1/1:55.4429:16:0:0:16:569:-10,-4.81648,0 1/1:91.5661:28:0:0:28:1052:-10,-8.42884,0 1/1:43.4017:12:0:0:12:426:-10,-3.61236,0 1/1:22.3296:5:0:0:5:188:-10,-1.50515,0 1/1:99:42:0:0:42:1544:-10,-10,0 1/1:64.4738:19:0:0:19:673:-10,-5.71957,0 1/1:64.4738:19:0:0:19:624:-10,-5.71957,0 1/1:31.3605:8:0:0:8:292:-10,-2.40824,0 1/1:43.4017:12:0:0:12:442:-10,-3.61236,0 1/1:46.412:13:0:0:13:474:-10,-3.91339,0 1/1:85.5454:26:0:0:26:924:-10,-7.82678,0 1/1:73.5047:22:0:0:22:812:-10,-6.62266,0 1/1:99:40:0:0:40:1438:-10,-10,0 1/1:97.5856:30:0:0:30:1075:-10,-9.0309,0 1/1:34.3708:9:0:0:9:316:-10,-2.70927,0 1/1:99:44:0:0:44:1585:-10,-10,0 1/1:88.556:27:0:0:27:1001:-10,-8.12781,0 1/1:49.4223:14:0:0:14:496:-10,-4.21442,0 1/1:99:37:0:0:37:1354:-10,-10,0 1/1:52.4326:15:0:0:15:520:-10,-4.51545,0 1/1:67.4841:20:0:0:20:739:-10,-6.0206,0 1/1:99:32:0:0:32:1144:-10,-9.63296,0 1/1:85.5454:26:0:0:26:944:-10,-7.82678,0 1/1:64.4738:19:0:0:19:716:-10,-5.71957,0 1/1:99:31:0:0:31:983:-10,-9.33193,0 1/1:43.4017:12:0:0:12:456:-10,-3.61236,0 1/1:99:37:0:0:37:1338:-10,-10,0 1/1:73.5047:22:0:0:22:819:-10,-6.62266,0 1/1:28.3502:7:0:0:7:262:-10,-2.10721,0 1/1:58.4532:17:0:0:17:589:-10,-5.11751,0 1/1:99:37:0:0:37:1305:-10,-10,0 1/1:99:34:0:0:34:1233:-10,-10,0 1/1:82.5354:25:0:0:25:880:-10,-7.52575,0 1/1:76.515:23:0:0:23:850:-10,-6.92369,0 1/1:82.5354:25:0:0:25:894:-10,-7.52575,0 1/1:20.5197:13:1:16:12:422:-10,-1.19945,0 1/1:40.3914:11:0:0:11:418:-10,-3.31133,0 1/1:49.4223:14:0:0:14:524:-10,-4.21442,0 1/1:43.4017:12:0:0:12:421:-10,-3.61236,0 0/0:49.2443:29:29:1080:0:0:0,-8.72987,-10 1/1:94.5732:29:0:0:29:1070:-10,-8.72987,0 0/0:28.1722:22:22:834:0:0:0,-6.62266,-10 scaffold_198 1500924 . C T 25896.2 . AB=0.532646;ABP=5.70412;AC=64;AF=0.347826;AN=184;AO=868;CIGAR=1X;DP=2381;DPB=2381;DPRA=1.09474;EPP=3.0103;EPPR=6.89367;GTI=3;LEN=1;MEANALT=1.025;MQM=59.5369;MQMR=59.541;NS=92;NUMALT=1;ODDS=0.306701;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=31889;QR=55102;RO=1512;RPP=1395.24;RPPR=2147.6;RUN=1;SAF=449;SAP=5.26183;SAR=419;SRF=727;SRP=7.84154;SRR=785;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:25.9114:20:19:701:1:16:0,-3.11957,-10 0/0:42.949:17:17:615:0:0:0,-5.11751,-10 0/0:73.052:27:27:1002:0:0:0,-8.12781,-10 0/0:58.0005:22:22:828:0:0:0,-6.62266,-10 0/0:30.9078:13:13:452:0:0:0,-3.91339,-10 0/0:27.8975:12:12:408:0:0:0,-3.61236,-10 0/0:99:45:45:1627:0:0:0,-10,-10 0/0:79.0726:29:29:1033:0:0:0,-8.72987,-10 0/0:73.052:27:27:1004:0:0:0,-8.12781,-10 0/0:9.83566:6:6:214:0:0:0,-1.80618,-10 0/0:24.8872:11:11:414:0:0:0,-3.31133,-10 0/1:0.906313:5:5:179:0:0:0,-1.50515,-10 0/0:94.1218:34:34:1230:0:0:0,-10,-10 0/0:99:40:40:1454:0:0:0,-10,-10 0/0:99:37:37:1341:0:0:0,-10,-10 0/1:99:23:9:337:14:529:-10,0,-10 0/0:97.135:35:35:1297:0:0:0,-10,-10 0/0:9.83566:6:6:224:0:0:0,-1.80618,-10 1/1:95.7824:36:0:0:36:1350:-10,-10,0 0/0:99:43:43:1585:0:0:0,-10,-10 1/1:53.6415:22:0:0:22:828:-10,-6.62266,0 0/1:99:37:13:466:24:886:-10,0,-10 0/0:18.8666:9:9:335:0:0:0,-2.70927,-10 0/1:99:20:12:454:8:303:-10,0,-10 1/1:95.7824:36:0:0:36:1360:-10,-10,0 1/1:92.7738:35:0:0:35:1283:-10,-10,0 1/1:56.6518:23:0:0:23:842:-10,-6.92369,0 1/1:47.6209:20:0:0:20:744:-10,-6.0206,0 1/1:35.5797:16:0:0:16:541:-10,-4.81648,0 1/1:99:41:0:0:41:1459:-10,-10,0 1/1:38.59:17:0:0:17:633:-10,-5.11751,0 1/1:11.4973:8:0:0:8:299:-10,-2.40824,0 1/1:53.6415:22:0:0:22:821:-10,-6.62266,0 0/0:21.8769:10:10:347:0:0:0,-3.0103,-10 0/1:0.026354:21:1:38:20:695:-10,-1.19941,0 1/1:20.5282:11:0:0:11:413:-10,-3.31133,0 0/0:36.9284:15:15:554:0:0:0,-4.51545,-10 0/1:99:38:20:731:18:680:-10,0,-10 0/0:97.135:35:35:1254:0:0:0,-10,-10 0/1:99:21:8:304:13:467:-10,0,-10 1/1:99:49:0:0:49:1832:-10,-10,0 1/1:44.6106:19:0:0:19:675:-10,-5.71957,0 0/0:45.9593:18:18:660:0:0:0,-5.41854,-10 0/0:99:38:38:1432:0:0:0,-10,-10 0/1:99:34:22:787:12:446:-10,0,-10 1/1:65.6827:26:0:0:26:956:-10,-7.82678,0 1/1:99:47:0:0:47:1690:-10,-10,0 1/1:63.1164:38:1:25:37:1373:-10,-7.35936,0 1/1:23.5385:12:0:0:12:449:-10,-3.61236,0 1/1:99:55:0:0:55:2019:-10,-10,0 1/1:32.5694:15:0:0:15:544:-10,-4.51545,0 1/1:99:44:0:0:44:1648:-10,-10,0 1/1:35.5797:16:0:0:16:574:-10,-4.81648,0 1/1:20.5282:11:0:0:11:395:-10,-3.31133,0 1/1:99:45:0:0:45:1656:-10,-10,0 1/1:38.59:17:0:0:17:639:-10,-5.11751,0 0/1:99:40:24:861:16:598:-10,0,-10 0/0:15.8563:8:8:292:0:0:0,-2.40824,-10 0/0:58.0005:22:22:781:0:0:0,-6.62266,-10 0/0:39.9387:16:16:575:0:0:0,-4.81648,-10 0/0:85.0932:31:31:1164:0:0:0,-9.33193,-10 0/0:39.9938:25:24:841:1:16:0,-4.52781,-10 0/0:99:53:53:1936:0:0:0,-10,-10 0/1:99:28:14:500:14:507:-10,0,-10 0/0:36.9284:15:15:568:0:0:0,-4.51545,-10 0/0:99:46:46:1696:0:0:0,-10,-10 0/0:64.0211:24:24:874:0:0:0,-7.22472,-10 0/0:36.9284:15:15:512:0:0:0,-4.51545,-10 0/0:55.1148:38:36:1335:1:38:0,-6.03991,-10 0/0:39.9387:16:16:588:0:0:0,-4.81648,-10 0/0:70.0417:26:26:949:0:0:0,-7.82678,-10 0/0:99:37:37:1342:0:0:0,-10,-10 0/0:99:37:37:1339:0:0:0,-10,-10 0/0:64.0211:24:24:902:0:0:0,-7.22472,-10 0/0:99:38:38:1377:0:0:0,-10,-10 0/0:42.949:17:17:637:0:0:0,-5.11751,-10 0/0:30.9078:13:13:476:0:0:0,-3.91339,-10 0/0:67.0314:25:25:902:0:0:0,-7.52575,-10 0/0:27.8975:12:12:427:0:0:0,-3.61236,-10 0/0:27.8975:12:12:456:0:0:0,-3.61236,-10 0/0:99:59:59:2179:0:0:0,-10,-10 0/0:73.052:27:27:954:0:0:0,-8.12781,-10 0/0:99:37:37:1332:0:0:0,-10,-10 0/0:67.0314:25:25:902:0:0:0,-7.52575,-10 0/1:99:29:13:476:16:607:-10,0,-10 0/1:0.906313:5:5:181:0:0:0,-1.50515,-10 1/1:74.7136:29:0:0:29:1062:-10,-8.72987,0 0/0:76.0622:28:28:1006:0:0:0,-8.42884,-10 0/0:51.9799:20:20:752:0:0:0,-6.0206,-10 0/0:73.052:27:27:992:0:0:0,-8.12781,-10 0/0:34.3353:23:22:766:1:16:0,-3.96196,-10 0/0:67.0314:25:25:900:0:0:0,-7.52575,-10 scaffold_198 1501019 . C T 237.043 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1651;DPB=1651;DPRA=1.43355;EPP=7.18621;EPPR=3.2012;GTI=0;LEN=1;MEANALT=1;MQM=57.0769;MQMR=59.8132;NS=92;NUMALT=1;ODDS=9.3383;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=422;QR=59558;RO=1638;RPP=31.2394;RPPR=3346.05;RUN=1;SAF=9;SAP=7.18621;SAR=4;SRF=792;SRP=6.876;SRR=846;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.6086:7:7:265:0:0:0,-2.10721,-10 0/0:52.5983:6:6:224:0:0:0,-1.80618,-10 0/0:82.7013:16:16:574:0:0:0,-4.81648,-10 0/0:61.6292:9:9:316:0:0:0,-2.70927,-10 0/0:76.6807:14:14:523:0:0:0,-4.21442,-10 0/0:49.588:5:5:181:0:0:0,-1.50515,-10 0/0:99:44:44:1607:0:0:0,-10,-10 0/0:99:22:22:809:0:0:0,-6.62266,-10 0/0:61.6292:9:9:330:0:0:0,-2.70927,-10 0/0:43.5674:3:3:109:0:0:0,-0.90309,-10 0/0:67.6498:11:11:409:0:0:0,-3.31133,-10 0/0:52.5983:6:6:227:0:0:0,-1.80618,-10 0/0:99:36:35:1284:1:16:0,-7.68078,-10 0/0:99:32:32:1176:0:0:0,-9.63296,-10 0/0:79.691:15:15:570:0:0:0,-4.51545,-10 0/0:79.691:15:15:542:0:0:0,-4.51545,-10 0/0:94.743:20:20:710:0:0:0,-6.0206,-10 0/0:49.588:5:5:180:0:0:0,-1.50515,-10 0/0:67.6498:11:11:399:0:0:0,-3.31133,-10 0/0:99:31:31:1121:0:0:0,-9.33193,-10 0/1:99:20:10:349:10:374:-10,0,-10 0/0:99:23:23:829:0:0:0,-6.92369,-10 0/0:55.6086:7:7:266:0:0:0,-2.10721,-10 0/0:94.743:20:20:729:0:0:0,-6.0206,-10 0/0:88.722:18:18:681:0:0:0,-5.41854,-10 0/0:99:22:22:739:0:0:0,-6.62266,-10 0/0:76.6807:14:14:520:0:0:0,-4.21442,-10 0/0:79.691:15:15:557:0:0:0,-4.51545,-10 0/0:64.6395:10:10:376:0:0:0,-3.0103,-10 0/0:99:38:38:1405:0:0:0,-10,-10 0/0:76.6807:14:14:512:0:0:0,-4.21442,-10 0/0:61.6292:9:9:317:0:0:0,-2.70927,-10 0/0:63.1538:18:17:620:1:16:0,-2.56327,-10 0/0:58.6189:8:8:299:0:0:0,-2.40824,-10 0/0:76.6807:14:14:504:0:0:0,-4.21442,-10 0/0:40.5571:2:2:76:0:0:0,-0.60206,-7.22 0/0:73.6704:13:13:477:0:0:0,-3.91339,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:79.691:15:15:528:0:0:0,-4.51545,-10 0/0:73.6704:13:13:487:0:0:0,-3.91339,-10 0/0:91.731:19:19:686:0:0:0,-5.71957,-10 0/0:88.722:18:18:647:0:0:0,-5.41854,-10 0/0:99:24:24:878:0:0:0,-7.22472,-10 0/0:99:39:39:1368:0:0:0,-10,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:76.6807:14:14:500:0:0:0,-4.21442,-10 0/0:99:30:30:1069:0:0:0,-9.0309,-10 0/0:73.6704:13:13:457:0:0:0,-3.91339,-10 0/0:73.6704:13:13:481:0:0:0,-3.91339,-10 0/0:99:43:43:1558:0:0:0,-10,-10 0/0:88.722:18:18:668:0:0:0,-5.41854,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:67.6498:11:11:370:0:0:0,-3.31133,-10 0/0:79.691:15:15:567:0:0:0,-4.51545,-10 0/0:99:42:42:1527:0:0:0,-10,-10 0/0:67.6498:11:11:381:0:0:0,-3.31133,-10 0/0:97.7538:21:21:773:0:0:0,-6.32163,-10 0/0:61.6292:9:9:304:0:0:0,-2.70927,-10 0/0:91.731:19:19:668:0:0:0,-5.71957,-10 0/0:64.6395:10:10:364:0:0:0,-3.0103,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:99:26:26:965:0:0:0,-7.82678,-10 0/0:99:35:35:1289:0:0:0,-10,-10 0/0:94.743:20:20:732:0:0:0,-6.0206,-10 0/0:67.6498:11:11:411:0:0:0,-3.31133,-10 0/0:99:31:31:1118:0:0:0,-9.33193,-10 0/0:73.6704:13:13:451:0:0:0,-3.91339,-10 0/0:70.6601:12:12:447:0:0:0,-3.61236,-10 0/0:99:33:33:1168:0:0:0,-9.93399,-10 0/0:67.6498:11:11:374:0:0:0,-3.31133,-10 0/0:82.7013:16:16:603:0:0:0,-4.81648,-10 0/0:99:26:26:926:0:0:0,-7.82678,-10 0/0:88.485:27:26:972:1:16:0,-5.09645,-10 0/0:91.731:19:19:665:0:0:0,-5.71957,-10 0/0:99:34:34:1200:0:0:0,-10,-10 0/0:64.6395:10:10:380:0:0:0,-3.0103,-10 0/0:70.6601:12:12:451:0:0:0,-3.61236,-10 0/0:70.6601:12:12:438:0:0:0,-3.61236,-10 0/0:52.5983:6:6:228:0:0:0,-1.80618,-10 0/0:64.6395:10:10:347:0:0:0,-3.0103,-10 0/0:99:37:37:1349:0:0:0,-10,-10 0/0:79.691:15:15:562:0:0:0,-4.51545,-10 0/0:88.722:18:18:645:0:0:0,-5.41854,-10 0/0:73.6704:13:13:492:0:0:0,-3.91339,-10 0/0:99:25:25:891:0:0:0,-7.52575,-10 0/0:43.5674:3:3:104:0:0:0,-0.90309,-9.70667 0/0:94.743:20:20:711:0:0:0,-6.0206,-10 0/0:82.7013:16:16:548:0:0:0,-4.81648,-10 0/0:40.5571:2:2:76:0:0:0,-0.60206,-7.22 0/0:73.6704:13:13:493:0:0:0,-3.91339,-10 0/0:76.6807:14:14:529:0:0:0,-4.21442,-10 0/0:82.7013:16:16:607:0:0:0,-4.81648,-10 scaffold_202 9373 . G A 3220.56 . AB=0.475862;ABP=3.74411;AC=10;AF=0.0543478;AN=184;AO=120;CIGAR=1X;DP=1850;DPB=1850;DPRA=1.25136;EPP=5.61607;EPPR=4.06652;GTI=1;LEN=1;MEANALT=1.125;MQM=35.3667;MQMR=28.1243;NS=92;NUMALT=1;ODDS=3.58822;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4421;QR=62952;RO=1729;RPP=263.587;RPPR=3757.49;RUN=1;SAF=54;SAP=5.61607;SAR=66;SRF=850;SRP=4.06652;SRR=879;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.256:15:15:556:0:0:0,-4.51545,-10 0/0:31.1839:8:8:279:0:0:0,-2.40824,-10 0/0:70.3178:21:21:705:0:0:0,-6.32163,-10 0/0:52.256:15:15:557:0:0:0,-4.51545,-10 0/0:31.1839:8:8:290:0:0:0,-2.40824,-10 0/0:28.1736:7:7:244:0:0:0,-2.10721,-10 0/0:99:31:31:1117:0:0:0,-9.33193,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:49.2457:14:14:517:0:0:0,-4.21442,-10 0/0:16.1324:3:3:111:0:0:0,-0.90309,-10 0/0:37.2045:10:10:379:0:0:0,-3.0103,-10 0/0:19.1427:4:4:145:0:0:0,-1.20412,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:94.3997:29:29:1032:0:0:0,-8.72987,-10 0/1:99:34:18:676:16:593:-10,0,-10 0/0:76.3383:23:23:834:0:0:0,-6.92369,-10 0/0:91.3897:28:28:1034:0:0:0,-8.42884,-10 0/0:37.2045:10:10:352:0:0:0,-3.0103,-10 0/0:73.3281:22:22:792:0:0:0,-6.62266,-10 0/0:99:48:48:1754:0:0:0,-10,-10 0/0:46.2354:13:13:463:0:0:0,-3.91339,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:40.2148:11:11:402:0:0:0,-3.31133,-10 0/0:73.3281:22:22:820:0:0:0,-6.62266,-10 0/0:61.2869:18:18:654:0:0:0,-5.41854,-10 0/1:99:21:8:304:13:460:-10,0,-10 0/0:64.2972:19:19:696:0:0:0,-5.71957,-10 0/0:46.2354:13:13:432:0:0:0,-3.91339,-10 0/0:58.2766:17:17:633:0:0:0,-5.11751,-10 0/0:99:42:42:1492:0:0:0,-10,-10 0/0:22.153:5:5:190:0:0:0,-1.50515,-10 0/0:43.2251:12:12:456:0:0:0,-3.61236,-10 0/0:64.2972:19:19:680:0:0:0,-5.71957,-10 0/0:46.2354:13:13:486:0:0:0,-3.91339,-10 0/0:82.3588:25:25:922:0:0:0,-7.52575,-10 0/0:25.1633:6:6:220:0:0:0,-1.80618,-10 0/0:76.3383:23:23:863:0:0:0,-6.92369,-10 0/0:76.3383:23:23:850:0:0:0,-6.92369,-10 0/0:43.2251:12:12:431:0:0:0,-3.61236,-10 0/0:61.2869:18:18:673:0:0:0,-5.41854,-10 0/0:99:38:38:1431:0:0:0,-10,-10 0/0:61.2869:18:18:646:0:0:0,-5.41854,-10 0/0:70.3178:21:21:763:0:0:0,-6.32163,-10 0/0:99:41:41:1487:0:0:0,-10,-10 0/1:99:16:8:299:8:296:-10,0,-10 0/0:31.1839:8:8:254:0:0:0,-2.40824,-10 0/0:99:50:50:1826:0:0:0,-10,-10 0/0:85.3689:26:26:942:0:0:0,-7.82678,-10 0/0:52.256:15:15:540:0:0:0,-4.51545,-10 0/0:99:45:45:1574:0:0:0,-10,-10 0/0:34.1942:9:9:342:0:0:0,-2.70927,-10 0/0:99:31:31:1169:0:0:0,-9.33193,-10 0/0:37.2045:10:10:349:0:0:0,-3.0103,-10 0/0:22.153:5:5:170:0:0:0,-1.50515,-10 0/0:99:50:50:1789:0:0:0,-10,-10 0/0:79.3487:24:24:892:0:0:0,-7.22472,-10 0/0:79.3487:24:24:877:0:0:0,-7.22472,-10 0/0:28.1736:7:7:253:0:0:0,-2.10721,-10 0/0:61.2869:18:18:661:0:0:0,-5.41854,-10 0/0:43.2251:12:12:449:0:0:0,-3.61236,-10 0/0:99:39:39:1413:0:0:0,-10,-10 1/1:17.7532:14:0:0:14:520:-10,-4.21442,0 1/1:38.9923:38:1:38:37:1376:-10,-6.05936,0 0/0:58.2766:17:17:618:0:0:0,-5.11751,-10 0/0:37.2045:10:10:376:0:0:0,-3.0103,-10 0/0:88.3788:27:27:995:0:0:0,-8.12781,-10 0/0:79.3487:24:24:878:0:0:0,-7.22472,-10 0/0:40.2148:11:11:413:0:0:0,-3.31133,-10 0/1:99:34:21:737:13:471:-10,0,-10 0/0:34.1942:9:9:264:0:0:0,-2.70927,-10 0/0:61.2869:18:18:652:0:0:0,-5.41854,-10 0/0:88.3788:27:27:987:0:0:0,-8.12781,-10 0/0:88.3788:27:27:1007:0:0:0,-8.12781,-10 0/0:73.3281:22:22:834:0:0:0,-6.62266,-10 0/0:99:35:35:1227:0:0:0,-10,-10 0/0:40.2148:11:11:396:0:0:0,-3.31133,-10 0/0:52.256:15:15:554:0:0:0,-4.51545,-10 0/1:0.0631621:6:0:0:6:225:-10,-1.80618,0 0/0:34.1942:9:9:328:0:0:0,-2.70927,-10 0/0:34.1942:9:9:325:0:0:0,-2.70927,-10 0/0:79.3487:24:24:892:0:0:0,-7.22472,-10 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/1:99:34:20:733:13:480:-10,0,-10 0/0:67.3075:20:20:758:0:0:0,-6.0206,-10 0/0:67.3075:20:20:747:0:0:0,-6.0206,-10 0/0:25.1633:6:6:226:0:0:0,-1.80618,-10 0/0:46.2354:13:13:491:0:0:0,-3.91339,-10 0/0:46.2354:13:13:478:0:0:0,-3.91339,-10 0/0:16.1324:3:3:114:0:0:0,-0.90309,-10 0/0:58.2766:17:17:616:0:0:0,-5.11751,-10 0/0:67.3075:20:20:747:0:0:0,-6.0206,-10 0/0:55.2663:16:16:575:0:0:0,-4.81648,-10 scaffold_202 259215 . A C 5723.38 . AB=0.452381;ABP=7.97367;AC=20;AF=0.108696;AN=184;AO=211;CIGAR=1X;DP=1902;DPB=1902;DPRA=1.1536;EPP=12.9003;EPPR=3.57795;GTI=1;LEN=1;MEANALT=1;MQM=59.5261;MQMR=59.9395;NS=92;NUMALT=1;ODDS=0.685164;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7498;QR=62216;RO=1687;RPP=386.352;RPPR=3460.79;RUN=1;SAF=99;SAP=4.74954;SAR=112;SRF=847;SRP=3.07337;SRR=840;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:51.8403:14:14:520:0:0:0,-4.21442,-10 0/0:48.83:13:13:483:0:0:0,-3.91339,-10 0/0:87.9637:26:26:918:0:0:0,-7.82678,-10 0/0:33.7785:8:8:291:0:0:0,-2.40824,-10 0/0:63.8815:18:18:654:0:0:0,-5.41854,-10 0/0:48.83:13:13:472:0:0:0,-3.91339,-10 0/0:96.9935:29:29:1092:0:0:0,-8.72987,-10 0/1:99:34:19:718:15:534:-10,0,-10 0/0:60.8712:17:17:616:0:0:0,-5.11751,-10 1/1:5.04326:10:0:0:10:319:-10,-3.0103,0 0/0:27.7579:6:6:228:0:0:0,-1.80618,-10 0/0:36.7888:9:9:338:0:0:0,-2.70927,-10 0/1:99:35:21:759:14:527:-10,0,-10 0/0:96.9935:29:29:1061:0:0:0,-8.72987,-10 0/0:99:33:33:1193:0:0:0,-9.93399,-10 1/1:92.3415:39:0:0:39:1355:-10,-10,0 0/0:99:31:31:1170:0:0:0,-9.33193,-10 0/1:0.0062913:2:0:0:2:76:-7.22,-0.60206,0 0/0:93.9814:28:28:1025:0:0:0,-8.42884,-10 0/0:99:34:34:1275:0:0:0,-10,-10 0/0:84.9532:25:25:920:0:0:0,-7.52575,-10 0/0:96.9935:29:29:1068:0:0:0,-8.72987,-10 0/0:45.8197:12:12:451:0:0:0,-3.61236,-10 0/0:66.8918:19:19:692:0:0:0,-5.71957,-10 0/0:66.8918:19:19:697:0:0:0,-5.71957,-10 0/0:93.9814:28:28:1041:0:0:0,-8.42884,-10 0/0:72.9124:21:21:790:0:0:0,-6.32163,-10 0/0:69.9021:20:20:746:0:0:0,-6.0206,-10 0/0:84.9532:25:25:913:0:0:0,-7.52575,-10 0/0:99:30:30:1101:0:0:0,-9.0309,-10 0/0:45.8197:12:12:451:0:0:0,-3.61236,-10 0/0:21.7373:4:4:148:0:0:0,-1.20412,-10 0/0:75.9227:23:22:810:0:0:0,-6.62266,-10 0/0:39.7991:10:10:380:0:0:0,-3.0103,-10 0/0:42.8094:11:11:415:0:0:0,-3.31133,-10 0/0:24.7476:5:5:190:0:0:0,-1.50515,-10 0/0:42.8094:11:11:416:0:0:0,-3.31133,-10 0/0:99:31:31:1166:0:0:0,-9.33193,-10 0/0:60.8712:17:17:601:0:0:0,-5.11751,-10 0/0:60.8712:17:17:595:0:0:0,-5.11751,-10 0/0:93.9814:28:28:1037:0:0:0,-8.42884,-10 0/0:54.8506:15:15:531:0:0:0,-4.51545,-10 0/0:57.8609:16:16:598:0:0:0,-4.81648,-10 0/1:99:26:16:567:10:373:-10,0,-10 0/0:87.9637:26:26:956:0:0:0,-7.82678,-10 0/0:69.9021:20:20:727:0:0:0,-6.0206,-10 0/0:99:51:51:1901:0:0:0,-10,-10 0/0:99:31:31:1138:0:0:0,-9.33193,-10 0/0:51.8403:14:14:531:0:0:0,-4.21442,-10 0/0:99:38:38:1395:0:0:0,-10,-10 0/0:54.8506:15:15:568:0:0:0,-4.51545,-10 0/0:93.9814:28:28:986:0:0:0,-8.42884,-10 0/0:39.7991:11:10:380:0:0:0,-3.0103,-10 0/0:24.7476:5:5:170:0:0:0,-1.50515,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:57.8609:17:16:582:0:0:0,-4.81648,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 1/1:14.0742:13:0:0:13:467:-10,-3.91339,0 0/0:48.83:13:13:488:0:0:0,-3.91339,-10 1/1:32.136:19:0:0:19:664:-10,-5.71957,0 0/0:93.9814:28:28:1050:0:0:0,-8.42884,-10 1/1:23.1051:16:0:0:16:570:-10,-4.81648,0 0/1:99:28:11:417:17:600:-10,0,-10 0/0:78.933:23:23:851:0:0:0,-6.92369,-10 0/0:36.7888:9:9:336:0:0:0,-2.70927,-10 0/0:99:40:40:1478:0:0:0,-10,-10 0/1:99:26:14:526:12:441:-10,0,-10 0/0:33.7785:8:8:257:0:0:0,-2.40824,-10 0/1:99:33:19:694:14:502:-10,0,-10 0/0:36.7888:9:9:320:0:0:0,-2.70927,-10 0/0:72.9124:21:21:787:0:0:0,-6.32163,-10 0/0:90.9739:27:27:992:0:0:0,-8.12781,-10 0/0:96.9935:29:29:1073:0:0:0,-8.72987,-10 0/0:39.7991:10:10:380:0:0:0,-3.0103,-10 0/0:84.9532:25:25:885:0:0:0,-7.52575,-10 0/0:51.8403:14:14:500:0:0:0,-4.21442,-10 0/0:57.8609:16:16:602:0:0:0,-4.81648,-10 0/0:33.7785:8:8:296:0:0:0,-2.40824,-10 0/0:36.7888:10:9:339:0:0:0,-2.70927,-10 0/0:57.8609:16:16:601:0:0:0,-4.81648,-10 0/1:99:34:22:807:12:446:-10,0,-10 0/0:96.9935:29:29:1060:0:0:0,-8.72987,-10 0/0:84.9532:25:25:942:0:0:0,-7.52575,-10 0/0:99:30:30:1138:0:0:0,-9.0309,-10 0/0:75.9227:22:22:833:0:0:0,-6.62266,-10 0/0:27.7579:6:6:228:0:0:0,-1.80618,-10 0/0:81.9433:24:24:888:0:0:0,-7.22472,-10 0/0:36.7888:9:9:338:0:0:0,-2.70927,-10 0/1:99:11:3:92:8:254:-10,0,-7.49282 0/0:93.9814:28:28:1057:0:0:0,-8.42884,-10 0/1:99:23:13:479:10:370:-10,0,-10 0/0:72.9124:21:21:772:0:0:0,-6.32163,-10 scaffold_202 288241 . G C 715.524 . AB=0.612245;ABP=8.37251;AC=2;AF=0.0108696;AN=184;AO=32;CIGAR=1X;DP=1550;DPB=1550;DPRA=1.74652;EPP=7.35324;EPPR=3.37747;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9551;NS=92;NUMALT=1;ODDS=2.78456;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1102;QR=54928;RO=1514;RPP=72.4974;RPPR=3178.67;RUN=1;SAF=12;SAP=7.35324;SAR=20;SRF=736;SRP=5.54034;SRR=778;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.1867:13:13:470:0:0:0,-3.91339,-10 0/0:16.0837:3:3:112:0:0:0,-0.90309,-10 0/0:73.2794:22:22:805:0:0:0,-6.62266,-10 0/0:58.2279:17:17:617:0:0:0,-5.11751,-10 0/0:43.1764:12:12:431:0:0:0,-3.61236,-10 0/0:49.197:14:14:527:0:0:0,-4.21442,-10 0/0:99:40:40:1509:0:0:0,-10,-10 0/0:49.197:14:14:507:0:0:0,-4.21442,-10 0/0:37.1558:10:10:369:0:0:0,-3.0103,-10 0/0:28.1249:7:7:265:0:0:0,-2.10721,-10 0/0:19.094:4:4:148:0:0:0,-1.20412,-10 0/0:16.0837:3:3:109:0:0:0,-0.90309,-10 0/0:73.2794:22:22:778:0:0:0,-6.62266,-10 0/0:73.2794:22:22:805:0:0:0,-6.62266,-10 0/0:55.2176:16:16:583:0:0:0,-4.81648,-10 0/0:76.2897:23:23:804:0:0:0,-6.92369,-10 0/0:64.2485:19:19:709:0:0:0,-5.71957,-10 0/0:25.1146:6:6:228:0:0:0,-1.80618,-10 0/0:58.2279:17:17:599:0:0:0,-5.11751,-10 0/1:99:34:14:511:20:702:-10,0,-10 0/1:99:15:5:190:10:346:-10,0,-10 0/0:97.361:30:30:1079:0:0:0,-9.0309,-10 0/0:19.094:4:4:138:0:0:0,-1.20412,-10 0/0:49.197:14:14:530:0:0:0,-4.21442,-10 0/0:79.3:24:24:869:0:0:0,-7.22472,-10 0/0:55.2176:16:16:581:0:0:0,-4.81648,-10 0/0:19.094:4:4:145:0:0:0,-1.20412,-10 0/0:52.2073:15:15:525:0:0:0,-4.51545,-10 0/0:58.2279:17:17:632:0:0:0,-5.11751,-10 0/0:73.2794:22:22:812:0:0:0,-6.62266,-10 0/0:13.0734:2:2:76:0:0:0,-0.60206,-7.22 0/0:19.094:4:4:152:0:0:0,-1.20412,-10 0/0:49.197:14:14:503:0:0:0,-4.21442,-10 0/0:58.2279:17:17:616:0:0:0,-5.11751,-10 0/0:46.1867:13:13:480:0:0:0,-3.91339,-10 0/0:34.1455:9:9:320:0:0:0,-2.70927,-10 0/0:49.197:14:14:491:0:0:0,-4.21442,-10 0/0:58.2279:17:17:636:0:0:0,-5.11751,-10 0/0:64.2485:19:19:718:0:0:0,-5.71957,-10 0/0:55.2176:16:16:578:0:0:0,-4.81648,-10 0/0:70.2691:21:21:765:0:0:0,-6.32163,-10 0/0:49.197:14:14:516:0:0:0,-4.21442,-10 0/0:49.197:14:14:502:0:0:0,-4.21442,-10 0/0:99:36:36:1244:0:0:0,-10,-10 0/0:58.2279:17:17:612:0:0:0,-5.11751,-10 0/0:40.1661:11:11:418:0:0:0,-3.31133,-10 0/0:99:32:32:1138:0:0:0,-9.63296,-10 0/0:58.2279:17:17:578:0:0:0,-5.11751,-10 0/0:43.1764:12:12:410:0:0:0,-3.61236,-10 0/0:65.4161:29:28:1011:1:16:0,-5.66747,-10 0/0:61.2382:18:18:621:0:0:0,-5.41854,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:40.1661:11:11:416:0:0:0,-3.31133,-10 0/0:19.094:4:4:148:0:0:0,-1.20412,-10 0/0:67.9861:36:35:1263:1:38:0,-5.48078,-10 0/0:49.197:14:14:498:0:0:0,-4.21442,-10 0/0:76.2897:23:23:814:0:0:0,-6.92369,-10 0/0:28.1249:7:7:243:0:0:0,-2.10721,-10 0/0:52.2073:15:15:536:0:0:0,-4.51545,-10 0/0:34.1455:9:9:313:0:0:0,-2.70927,-10 0/0:88.3301:27:27:1013:0:0:0,-8.12781,-10 0/0:49.197:14:14:532:0:0:0,-4.21442,-10 0/0:99:42:42:1537:0:0:0,-10,-10 0/0:52.2073:15:15:560:0:0:0,-4.51545,-10 0/0:28.1249:7:7:266:0:0:0,-2.10721,-10 0/0:91.341:28:28:1003:0:0:0,-8.42884,-10 0/0:31.1352:8:8:281:0:0:0,-2.40824,-10 0/0:49.197:14:14:461:0:0:0,-4.21442,-10 0/0:73.2794:22:22:742:0:0:0,-6.62266,-10 0/0:40.1661:11:11:399:0:0:0,-3.31133,-10 0/0:49.197:14:14:508:0:0:0,-4.21442,-10 0/0:88.3301:27:27:1003:0:0:0,-8.12781,-10 0/0:85.3202:28:26:936:0:0:0,-7.82678,-10 0/0:46.1867:13:13:493:0:0:0,-3.91339,-10 0/0:85.3202:26:26:958:0:0:0,-7.82678,-10 0/0:37.1558:10:10:354:0:0:0,-3.0103,-10 0/0:34.1455:9:9:324:0:0:0,-2.70927,-10 0/0:34.1455:9:9:316:0:0:0,-2.70927,-10 0/0:25.1146:6:6:226:0:0:0,-1.80618,-10 0/0:43.1764:12:12:429:0:0:0,-3.61236,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:91.341:30:28:1024:0:0:0,-8.42884,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:61.2382:18:18:667:0:0:0,-5.41854,-10 0/0:70.2691:21:21:786:0:0:0,-6.32163,-10 0/0:16.0837:3:3:114:0:0:0,-0.90309,-10 0/0:67.2588:20:20:756:0:0:0,-6.0206,-10 0/0:52.2073:15:15:554:0:0:0,-4.51545,-10 0/0:25.1146:6:6:204:0:0:0,-1.80618,-10 0/0:61.2382:18:18:679:0:0:0,-5.41854,-10 0/0:67.2588:20:20:706:0:0:0,-6.0206,-10 0/0:52.2073:15:15:516:0:0:0,-4.51545,-10 scaffold_202 288253 . T C 1047.99 . AB=0.672131;ABP=18.709;AC=3;AF=0.0163043;AN=184;AO=42;CIGAR=1X;DP=1545;DPB=1545;DPRA=1.24897;EPP=3.0103;EPPR=7.38652;GTI=0;LEN=1;MEANALT=1;MQM=59.5;MQMR=59.9747;NS=92;NUMALT=1;ODDS=2.72806;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1502;QR=54937;RO=1501;RPP=94.2121;RPPR=3262.39;RUN=1;SAF=21;SAP=3.0103;SAR=21;SRF=723;SRP=7.38652;SRR=778;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.0078:13:13:487:0:0:0,-3.91339,-10 0/0:15.9048:3:3:113:0:0:0,-0.90309,-10 0/0:70.0902:21:21:776:0:0:0,-6.32163,-10 0/0:58.049:17:17:639:0:0:0,-5.11751,-10 0/0:42.9975:12:12:441:0:0:0,-3.61236,-10 0/0:49.0181:14:14:520:0:0:0,-4.21442,-10 0/0:99:40:40:1456:0:0:0,-10,-10 0/0:49.0181:14:14:516:0:0:0,-4.21442,-10 0/0:36.9769:10:10:346:0:0:0,-3.0103,-10 0/0:27.946:7:7:264:0:0:0,-2.10721,-10 0/0:18.9151:4:4:150:0:0:0,-1.20412,-10 0/0:15.9048:3:3:114:0:0:0,-0.90309,-10 0/0:73.1005:22:22:807:0:0:0,-6.62266,-10 0/0:73.1005:22:22:809:0:0:0,-6.62266,-10 0/0:55.0387:16:16:601:0:0:0,-4.81648,-10 0/0:47.663:22:21:771:1:16:0,-3.68024,-10 0/0:64.0696:19:19:687:0:0:0,-5.71957,-10 0/0:24.9357:6:6:224:0:0:0,-1.80618,-10 0/0:58.049:17:17:643:0:0:0,-5.11751,-10 0/0:99:34:34:1272:0:0:0,-10,-10 0/0:52.0284:15:15:547:0:0:0,-4.51545,-10 0/0:97.1798:30:30:1092:0:0:0,-9.0309,-10 0/0:18.9151:4:4:129:0:0:0,-1.20412,-10 0/0:49.0181:14:14:527:0:0:0,-4.21442,-10 0/0:79.1211:24:24:790:0:0:0,-7.22472,-10 0/1:99:16:5:190:11:410:-10,0,-10 0/0:18.9151:4:4:130:0:0:0,-1.20412,-10 0/0:52.0284:15:15:515:0:0:0,-4.51545,-10 0/0:58.049:17:17:642:0:0:0,-5.11751,-10 0/0:73.1005:22:22:819:0:0:0,-6.62266,-10 0/0:12.8945:2:2:76:0:0:0,-0.60206,-7.22 0/0:18.9151:4:4:136:0:0:0,-1.20412,-10 0/0:49.0181:14:14:499:0:0:0,-4.21442,-10 0/0:58.049:17:17:640:0:0:0,-5.11751,-10 0/0:46.0078:13:13:468:0:0:0,-3.91339,-10 0/0:30.9563:8:8:280:0:0:0,-2.40824,-10 0/0:49.0181:14:14:482:0:0:0,-4.21442,-10 0/0:58.049:17:17:637:0:0:0,-5.11751,-10 0/0:61.0593:18:18:660:0:0:0,-5.41854,-10 0/0:55.0387:16:16:583:0:0:0,-4.81648,-10 0/0:70.0902:21:21:762:0:0:0,-6.32163,-10 0/0:49.0181:14:14:524:0:0:0,-4.21442,-10 0/0:49.0181:14:14:513:0:0:0,-4.21442,-10 0/0:99:36:36:1316:0:0:0,-10,-10 0/1:99:17:5:190:12:420:-10,0,-10 0/0:39.9872:11:11:418:0:0:0,-3.31133,-10 0/0:99:32:32:1157:0:0:0,-9.63296,-10 0/0:58.049:17:17:611:0:0:0,-5.11751,-10 0/0:42.9975:12:12:446:0:0:0,-3.61236,-10 0/0:94.171:29:29:1063:0:0:0,-8.72987,-10 0/0:61.0593:18:18:670:0:0:0,-5.41854,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:39.9872:11:11:418:0:0:0,-3.31133,-10 0/0:18.9151:4:4:152:0:0:0,-1.20412,-10 0/0:99:36:35:1276:0:0:0,-10,-10 0/0:49.0181:14:14:485:0:0:0,-4.21442,-10 0/0:76.1108:23:23:839:0:0:0,-6.92369,-10 0/0:27.946:7:7:244:0:0:0,-2.10721,-10 0/0:52.0284:15:15:562:0:0:0,-4.51545,-10 0/0:33.9666:9:9:341:0:0:0,-2.70927,-10 0/0:88.1516:27:27:973:0:0:0,-8.12781,-10 0/0:49.0181:14:14:509:0:0:0,-4.21442,-10 0/0:99:42:42:1563:0:0:0,-10,-10 0/0:52.0284:15:15:567:0:0:0,-4.51545,-10 0/0:27.946:7:7:266:0:0:0,-2.10721,-10 0/1:99:28:10:354:18:656:-10,0,-10 0/0:30.9563:8:8:303:0:0:0,-2.40824,-10 0/0:49.0181:14:14:527:0:0:0,-4.21442,-10 0/0:73.1005:22:22:802:0:0:0,-6.62266,-10 0/0:39.9872:11:11:409:0:0:0,-3.31133,-10 0/0:49.0181:14:14:520:0:0:0,-4.21442,-10 0/0:88.1516:27:27:985:0:0:0,-8.12781,-10 0/0:91.1615:28:28:999:0:0:0,-8.42884,-10 0/0:46.0078:13:13:488:0:0:0,-3.91339,-10 0/0:85.1415:26:26:981:0:0:0,-7.82678,-10 0/0:36.9769:10:10:358:0:0:0,-3.0103,-10 0/0:33.9666:9:9:341:0:0:0,-2.70927,-10 0/0:33.9666:9:9:340:0:0:0,-2.70927,-10 0/0:24.9357:6:6:221:0:0:0,-1.80618,-10 0/0:42.9975:12:12:431:0:0:0,-3.61236,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:97.1798:30:30:1072:0:0:0,-9.0309,-10 0/0:99:31:31:1119:0:0:0,-9.33193,-10 0/0:61.0593:18:18:643:0:0:0,-5.41854,-10 0/0:70.0902:21:21:772:0:0:0,-6.32163,-10 0/0:15.9048:3:3:114:0:0:0,-0.90309,-10 0/0:67.0799:20:20:747:0:0:0,-6.0206,-10 0/0:52.0284:15:15:547:0:0:0,-4.51545,-10 0/0:21.9254:6:5:188:0:0:0,-1.50515,-10 0/0:61.0593:18:18:680:0:0:0,-5.41854,-10 0/0:67.0799:20:20:725:0:0:0,-6.0206,-10 0/0:52.0284:15:15:539:0:0:0,-4.51545,-10 scaffold_202 288262 . G A 4813.61 . AB=0.621795;ABP=23.1103;AC=19;AF=0.103261;AN=184;AO=181;CIGAR=1X;DP=1539;DPB=1539;DPRA=1.16271;EPP=3.31023;EPPR=8.20935;GTI=4;LEN=1;MEANALT=1;MQM=59.9061;MQMR=59.9624;NS=92;NUMALT=1;ODDS=0.843553;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6627;QR=49163;RO=1357;RPP=396.047;RPPR=2949.7;RUN=1;SAF=88;SAP=3.31023;SAR=93;SRF=650;SRP=8.20935;SRR=707;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:16.6957:13:0:0:13:465:-10,-3.91339,0 0/1:0.013939:3:0:0:3:114:-10,-0.90309,0 1/1:40.7781:21:0:0:21:746:-10,-6.32163,0 1/1:28.7369:17:0:0:17:639:-10,-5.11751,0 0/0:42.5963:12:12:421:0:0:0,-3.61236,-10 0/0:48.6169:14:14:504:0:0:0,-4.21442,-10 0/0:99:40:40:1503:0:0:0,-10,-10 0/0:48.6169:14:14:485:0:0:0,-4.21442,-10 0/0:36.5757:10:10:341:0:0:0,-3.0103,-10 0/0:27.5448:7:7:243:0:0:0,-2.10721,-10 0/0:18.5139:4:4:126:0:0:0,-1.20412,-10 0/0:15.5036:3:3:114:0:0:0,-0.90309,-10 0/0:72.6993:22:22:796:0:0:0,-6.62266,-10 0/0:72.6993:22:22:823:0:0:0,-6.62266,-10 0/0:54.6375:16:16:576:0:0:0,-4.81648,-10 0/0:72.6993:22:22:755:0:0:0,-6.62266,-10 0/0:63.6684:19:19:687:0:0:0,-5.71957,-10 0/0:24.5345:6:6:228:0:0:0,-1.80618,-10 0/0:57.6478:17:17:607:0:0:0,-5.11751,-10 0/0:80.9652:34:33:1183:1:16:0,-7.10354,-10 0/0:51.6272:15:15:535:0:0:0,-4.51545,-10 0/0:96.7783:30:30:1081:0:0:0,-9.0309,-10 0/0:18.5139:4:4:129:0:0:0,-1.20412,-10 0/0:48.6169:14:14:515:0:0:0,-4.21442,-10 0/0:75.7096:24:23:819:0:0:0,-6.92369,-10 0/0:54.6375:16:16:600:0:0:0,-4.81648,-10 0/0:18.5139:4:4:143:0:0:0,-1.20412,-10 0/0:51.6272:15:15:498:0:0:0,-4.51545,-10 0/0:57.6478:17:17:633:0:0:0,-5.11751,-10 0/0:72.6993:22:22:810:0:0:0,-6.62266,-10 0/0:12.4933:2:2:67:0:0:0,-0.60206,-6.365 0/0:18.5139:4:4:146:0:0:0,-1.20412,-10 0/0:48.6169:14:14:503:0:0:0,-4.21442,-10 0/0:57.6478:17:17:638:0:0:0,-5.11751,-10 0/0:45.6066:13:13:489:0:0:0,-3.91339,-10 0/0:30.5551:8:8:278:0:0:0,-2.40824,-10 0/0:48.6169:14:14:512:0:0:0,-4.21442,-10 0/0:57.6478:17:17:612:0:0:0,-5.11751,-10 0/0:60.6581:18:18:664:0:0:0,-5.41854,-10 0/0:54.6375:16:16:598:0:0:0,-4.81648,-10 0/0:69.689:21:21:797:0:0:0,-6.32163,-10 0/0:48.6169:14:14:513:0:0:0,-4.21442,-10 0/0:48.6169:14:14:495:0:0:0,-4.21442,-10 0/0:99:36:36:1334:0:0:0,-10,-10 0/0:57.6478:17:17:624:0:0:0,-5.11751,-10 0/0:39.586:11:11:418:0:0:0,-3.31133,-10 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/0:54.6375:16:16:545:0:0:0,-4.81648,-10 0/0:42.5963:12:12:432:0:0:0,-3.61236,-10 0/0:93.7697:29:29:1051:0:0:0,-8.72987,-10 0/0:60.6581:18:18:634:0:0:0,-5.41854,-10 0/0:96.7783:30:30:1043:0:0:0,-9.0309,-10 0/0:39.586:11:11:417:0:0:0,-3.31133,-10 0/0:18.5139:4:4:137:0:0:0,-1.20412,-10 0/0:99:36:36:1260:0:0:0,-10,-10 0/0:45.6066:13:13:416:0:0:0,-3.91339,-10 0/0:27.5495:23:22:807:1:38:0,-1.76196,-10 0/0:27.5448:7:7:261:0:0:0,-2.10721,-10 0/0:51.6272:15:15:547:0:0:0,-4.51545,-10 0/0:33.5654:9:9:331:0:0:0,-2.70927,-10 0/0:60.8943:27:26:985:1:16:0,-5.09645,-10 0/0:48.6169:14:14:532:0:0:0,-4.21442,-10 0/0:99:41:41:1530:0:0:0,-10,-10 0/0:51.6272:15:15:556:0:0:0,-4.51545,-10 0/0:27.5448:7:7:266:0:0:0,-2.10721,-10 0/0:90.7602:28:28:1009:0:0:0,-8.42884,-10 0/0:30.5551:8:8:304:0:0:0,-2.40824,-10 0/0:48.6169:14:14:517:0:0:0,-4.21442,-10 0/0:72.6993:22:22:750:0:0:0,-6.62266,-10 0/0:39.586:11:11:416:0:0:0,-3.31133,-10 0/0:48.6169:14:14:504:0:0:0,-4.21442,-10 0/0:87.7504:27:27:987:0:0:0,-8.12781,-10 0/0:90.7602:28:28:1007:0:0:0,-8.42884,-10 0/0:45.6066:13:13:481:0:0:0,-3.91339,-10 0/0:84.7403:26:26:946:0:0:0,-7.82678,-10 0/0:36.5757:10:10:364:0:0:0,-3.0103,-10 0/1:0.996784:9:0:0:9:342:-10,-2.70927,0 0/0:33.5654:9:9:330:0:0:0,-2.70927,-10 0/1:0.112785:6:0:0:6:228:-10,-1.80618,0 1/1:13.6854:12:0:0:12:427:-10,-3.61236,0 0/1:99:35:17:609:18:652:-10,0,-10 0/1:99:30:16:571:14:517:-10,0,-10 0/1:99:30:15:507:15:564:-10,0,-10 1/1:31.7472:18:0:0:18:683:-10,-5.41854,0 0/0:69.689:21:21:764:0:0:0,-6.32163,-10 0/0:15.5036:3:3:114:0:0:0,-0.90309,-10 0/0:66.6787:20:20:745:0:0:0,-6.0206,-10 0/0:51.6272:15:15:531:0:0:0,-4.51545,-10 0/1:0.112785:6:0:0:6:224:-10,-1.80618,0 0/1:99:17:5:190:12:454:-10,0,-10 0/1:99:20:6:223:14:502:-10,0,-10 0/0:51.6272:15:15:555:0:0:0,-4.51545,-10 scaffold_202 306700 . G C 487.613 . AB=0.45283;ABP=4.03458;AC=2;AF=0.0108696;AN=184;AO=24;CIGAR=1X;DP=1908;DPB=1908;DPRA=1.28571;EPP=6.26751;EPPR=4.26613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.932;NS=92;NUMALT=1;ODDS=7.25041;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=754;QR=69277;RO=1883;RPP=55.1256;RPPR=4091.89;RUN=1;SAF=15;SAP=6.26751;SAR=9;SRF=925;SRP=4.26613;SRR=958;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:79.6579:18:18:656:0:0:0,-5.41854,-10 0/0:85.6781:20:20:749:0:0:0,-6.0206,-10 0/0:99:40:40:1499:0:0:0,-10,-10 0/0:76.6476:17:17:643:0:0:0,-5.11751,-10 0/0:64.6064:13:13:490:0:0:0,-3.91339,-10 0/0:67.6167:14:14:526:0:0:0,-4.21442,-10 0/1:99:37:23:850:14:429:-10,0,-10 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:76.6476:17:17:621:0:0:0,-5.11751,-10 0/0:49.5549:8:8:286:0:0:0,-2.40824,-10 0/0:43.5343:6:6:226:0:0:0,-1.80618,-10 0/0:46.5446:7:7:238:0:0:0,-2.10721,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:99:30:30:1110:0:0:0,-9.0309,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:99:33:33:1188:0:0:0,-9.93399,-10 0/1:99:16:6:228:10:325:-10,0,-10 0/0:58.5858:11:11:413:0:0:0,-3.31133,-10 0/0:91.6974:22:22:826:0:0:0,-6.62266,-10 0/0:99:40:40:1485:0:0:0,-10,-10 0/0:88.688:21:21:775:0:0:0,-6.32163,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:70.627:15:15:546:0:0:0,-4.51545,-10 0/0:91.6974:22:22:803:0:0:0,-6.62266,-10 0/0:88.688:21:21:736:0:0:0,-6.32163,-10 0/0:82.668:19:19:698:0:0:0,-5.71957,-10 0/0:99:25:25:942:0:0:0,-7.52575,-10 0/0:55.5755:10:10:376:0:0:0,-3.0103,-10 0/0:73.6373:16:16:585:0:0:0,-4.81648,-10 0/0:99:30:30:1112:0:0:0,-9.0309,-10 0/0:49.5549:8:8:281:0:0:0,-2.40824,-10 0/0:37.5137:4:4:151:0:0:0,-1.20412,-10 0/0:97.7188:24:24:870:0:0:0,-7.22472,-10 0/0:64.6064:13:13:471:0:0:0,-3.91339,-10 0/0:76.6476:17:17:613:0:0:0,-5.11751,-10 0/0:31.4931:2:2:75:0:0:0,-0.60206,-7.125 0/0:67.6167:14:14:527:0:0:0,-4.21442,-10 0/0:99:25:25:941:0:0:0,-7.52575,-10 0/0:94.7061:23:23:840:0:0:0,-6.92369,-10 0/0:55.5755:10:10:363:0:0:0,-3.0103,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/0:67.6167:14:14:515:0:0:0,-4.21442,-10 0/0:58.5858:11:11:385:0:0:0,-3.31133,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:64.6064:13:13:465:0:0:0,-3.91339,-10 0/0:91.6974:22:22:828:0:0:0,-6.62266,-10 0/0:99:52:52:1935:0:0:0,-10,-10 0/0:91.6974:22:22:826:0:0:0,-6.62266,-10 0/0:58.5858:11:11:415:0:0:0,-3.31133,-10 0/0:99:27:27:983:0:0:0,-8.12781,-10 0/0:67.6167:14:14:503:0:0:0,-4.21442,-10 0/0:99:35:35:1307:0:0:0,-10,-10 0/0:61.5961:12:12:456:0:0:0,-3.61236,-10 0/0:40.524:5:5:183:0:0:0,-1.50515,-10 0/0:99:29:29:1077:0:0:0,-8.72987,-10 0/0:91.6974:22:22:792:0:0:0,-6.62266,-10 0/0:73.6373:16:16:580:0:0:0,-4.81648,-10 0/0:70.627:15:15:556:0:0:0,-4.51545,-10 0/0:99:25:25:928:0:0:0,-7.52575,-10 0/0:82.668:20:19:719:0:0:0,-5.71957,-10 0/0:99:39:39:1402:0:0:0,-10,-10 0/0:94.7061:23:23:857:0:0:0,-6.92369,-10 0/0:99:39:39:1452:0:0:0,-10,-10 0/0:91.6974:22:22:835:0:0:0,-6.62266,-10 0/0:82.668:19:19:718:0:0:0,-5.71957,-10 0/0:99:36:36:1334:0:0:0,-10,-10 0/0:85.6781:20:20:703:0:0:0,-6.0206,-10 0/0:46.5446:7:7:264:0:0:0,-2.10721,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:52.5652:9:9:340:0:0:0,-2.70927,-10 0/0:61.5961:12:12:440:0:0:0,-3.61236,-10 0/0:94.7061:23:23:810:0:0:0,-6.92369,-10 0/0:64.6064:13:13:486:0:0:0,-3.91339,-10 0/0:97.7188:24:24:908:0:0:0,-7.22472,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:82.668:19:19:714:0:0:0,-5.71957,-10 0/0:64.6064:13:13:462:0:0:0,-3.91339,-10 0/0:49.5549:8:8:292:0:0:0,-2.40824,-10 0/0:49.5549:8:8:265:0:0:0,-2.40824,-10 0/0:82.668:19:19:699:0:0:0,-5.71957,-10 0/0:99:30:30:1099:0:0:0,-9.0309,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 0/0:97.7188:24:24:874:0:0:0,-7.22472,-10 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:76.6476:17:17:615:0:0:0,-5.11751,-10 0/0:79.6579:18:18:671:0:0:0,-5.41854,-10 0/0:79.6579:18:18:635:0:0:0,-5.41854,-10 0/0:46.5446:7:7:257:0:0:0,-2.10721,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:99:31:31:1091:0:0:0,-9.33193,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 scaffold_202 479135 . C T 2171.07 . AB=0.521739;ABP=3.38795;AC=15;AF=0.0815217;AN=184;AO=88;CIGAR=1X;DP=1083;DPB=1083;DPRA=0.931924;EPP=185.513;EPPR=2150.61;GTI=4;LEN=1;MEANALT=1.07692;MQM=60;MQMR=59.9799;NS=92;NUMALT=1;ODDS=0.220113;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3212;QR=36718;RO=993;RPP=3.40511;RPPR=8.69811;RUN=1;SAF=45;SAP=3.109;SAR=43;SRF=521;SRP=8.26076;SRR=472;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:0.908998:12:11:395:1:38:-1.26682,0,-10 0/0:38.0142:7:7:259:0:0:0,-2.10721,-10 0/0:68.1172:17:17:641:0:0:0,-5.11751,-10 0/0:44.0348:9:9:336:0:0:0,-2.70927,-10 0/0:53.0657:12:12:433:0:0:0,-3.61236,-10 0/0:28.9833:4:4:150:0:0:0,-1.20412,-10 0/0:95.2082:26:26:947:0:0:0,-7.82678,-10 0/0:56.076:13:13:491:0:0:0,-3.91339,-10 0/0:53.0657:12:12:456:0:0:0,-3.61236,-10 0/1:0.0019541:2:0:0:2:76:-7.22,-0.60206,0 0/0:38.0142:7:7:265:0:0:0,-2.10721,-10 0/0:22.9627:2:2:76:0:0:0,-0.60206,-7.22 0/0:65.1069:16:16:598:0:0:0,-4.81648,-10 0/0:62.0966:15:15:552:0:0:0,-4.51545,-10 0/1:99:12:8:303:4:151:-10,0,-10 0/1:99:18:8:280:10:357:-10,0,-10 0/0:71.1275:18:18:677:0:0:0,-5.41854,-10 0/0:35.0039:6:6:228:0:0:0,-1.80618,-10 0/0:50.0554:11:11:396:0:0:0,-3.31133,-10 0/0:99:31:31:1164:0:0:0,-9.33193,-10 0/0:44.0348:9:9:338:0:0:0,-2.70927,-10 0/0:83.1687:22:22:833:0:0:0,-6.62266,-10 0/0:31.9936:5:5:167:0:0:0,-1.50515,-10 0/0:77.1481:20:20:758:0:0:0,-6.0206,-10 0/0:50.0554:11:11:406:0:0:0,-3.31133,-10 0/1:95.1597:8:2:76:6:225:-10,0,-6.25892 0/0:44.0348:9:9:329:0:0:0,-2.70927,-10 0/0:38.0142:7:7:242:0:0:0,-2.10721,-10 1/1:11.6077:12:0:0:12:441:-10,-3.61236,0 0/0:83.1687:22:22:825:0:0:0,-6.62266,-10 0/0:38.0142:7:7:236:0:0:0,-2.10721,-10 0/0:28.9833:4:4:152:0:0:0,-1.20412,-10 0/0:35.0039:6:6:228:0:0:0,-1.80618,-10 0/0:53.0657:12:12:455:0:0:0,-3.61236,-10 0/0:47.0451:10:10:350:0:0:0,-3.0103,-10 0/0:35.0039:6:6:226:0:0:0,-1.80618,-10 0/0:35.0039:6:6:225:0:0:0,-1.80618,-10 0/0:68.1172:17:17:638:0:0:0,-5.11751,-10 0/0:38.0142:7:7:266:0:0:0,-2.10721,-10 0/0:47.0451:10:10:378:0:0:0,-3.0103,-10 0/0:77.1481:20:20:744:0:0:0,-6.0206,-10 0/0:38.0142:7:7:244:0:0:0,-2.10721,-10 0/0:59.0863:14:14:518:0:0:0,-4.21442,-10 0/0:80.1584:21:21:773:0:0:0,-6.32163,-10 0/1:99:14:9:340:5:168:-10,0,-10 0/0:50.0554:11:11:418:0:0:0,-3.31133,-10 0/0:80.1584:21:21:796:0:0:0,-6.32163,-10 0/0:62.0966:15:15:557:0:0:0,-4.51545,-10 0/0:56.076:13:13:493:0:0:0,-3.91339,-10 0/0:83.1687:22:22:766:0:0:0,-6.62266,-10 0/0:35.0039:6:6:228:0:0:0,-1.80618,-10 0/0:92.1996:25:25:947:0:0:0,-7.52575,-10 0/0:38.0142:7:7:242:0:0:0,-2.10721,-10 0/0:25.973:3:3:114:0:0:0,-0.90309,-10 0/0:74.1378:19:19:696:0:0:0,-5.71957,-10 0/0:50.0554:11:11:411:0:0:0,-3.31133,-10 0/0:44.0348:9:9:327:0:0:0,-2.70927,-10 0/1:0.126869:8:0:0:8:302:-10,-2.40824,0 0/0:41.0245:8:8:279:0:0:0,-2.40824,-10 0/0:38.0142:7:7:266:0:0:0,-2.10721,-10 0/0:99:28:28:1056:0:0:0,-8.42884,-10 1/1:5.58707:10:0:0:10:379:-10,-3.0103,0 1/1:26.6592:18:0:0:17:606:-10,-5.11751,0 0/0:56.076:13:13:484:0:0:0,-3.91339,-10 0/0:25.973:3:3:114:0:0:0,-0.90309,-10 0/0:62.0966:15:15:568:0:0:0,-4.51545,-10 0/0:53.0657:12:12:446:0:0:0,-3.61236,-10 0/0:38.0142:7:7:243:0:0:0,-2.10721,-10 0/1:99:19:9:318:10:355:-10,0,-10 0/0:44.0348:9:9:331:0:0:0,-2.70927,-10 0/0:41.0245:8:8:281:0:0:0,-2.40824,-10 0/0:47.0451:10:10:377:0:0:0,-3.0103,-10 0/0:53.0657:12:12:433:0:0:0,-3.61236,-10 0/0:31.9936:6:5:190:0:0:0,-1.50515,-10 0/0:65.1069:16:16:594:0:0:0,-4.81648,-10 0/0:53.0657:12:12:450:0:0:0,-3.61236,-10 0/0:44.0348:9:9:313:0:0:0,-2.70927,-10 0/1:0.0019541:2:0:0:2:76:-7.22,-0.60206,0 0/0:44.0348:9:9:334:0:0:0,-2.70927,-10 0/0:41.0245:8:8:289:0:0:0,-2.40824,-10 0/0:80.1584:21:21:773:0:0:0,-6.32163,-10 0/0:74.1378:19:19:693:0:0:0,-5.71957,-10 0/1:11.4905:9:8:279:1:38:-2.04497,0,-10 0/0:53.0657:12:12:447:0:0:0,-3.61236,-10 0/0:59.0863:14:14:531:0:0:0,-4.21442,-10 0/0:31.9936:5:5:177:0:0:0,-1.50515,-10 0/0:50.0554:11:11:403:0:0:0,-3.31133,-10 0/0:41.0245:8:8:296:0:0:0,-2.40824,-10 0/0:35.0039:6:6:218:0:0:0,-1.80618,-10 0/0:59.0863:14:14:523:0:0:0,-4.21442,-10 0/0:38.0142:7:7:266:0:0:0,-2.10721,-10 0/0:47.0451:10:10:357:0:0:0,-3.0103,-10 scaffold_202 511260 . A G 28116.8 . AB=0.62069;ABP=21.3555;AC=137;AF=0.744565;AN=184;AO=121;CIGAR=2X;DP=1342;DPB=1342;DPRA=0.983706;EPP=3.88966;EPPR=7.54613;GTI=8;LEN=1;MEANALT=1.38462;MQM=60;MQMR=59.9484;NS=92;NUMALT=2;ODDS=0.317847;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4346;QR=12923;RO=349;RPP=265.758;RPPR=718.047;RUN=1;SAF=57;SAP=3.88966;SAR=64;SRF=156;SRP=11.5282;SRR=193;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1|1:0.0850122:10:0:0:0,10:0,344:-10,-10,-10,-3.0103,-3.0103,0 1|1:0.0422981:9:0:0:0,9:0,320:-10,-10,-10,-2.70927,-2.70927,0 1|1:37.3982:18:0:0:0,18:0,628:-10,-10,-10,-5.41854,-5.41854,0 0|1:0.57745:12:0:0:0,12:0,426:-10,-10,-10,-3.61236,-3.61236,0 0|1:99:16:8:298:7,0:237,0:-10,0,-10,-10,-10,-10 1|1:40.2489:10:0:0:10,0:377,0:-10,-3.0103,0,-10,-3.0103,-10 0|1:99:24:15:557:9,0:342,0:-10,0,-10,-10,-10,-10 1|1:88.4131:26:0:0:26,0:929,0:-10,-7.82678,0,-10,-7.82678,-10 1|1:64.3313:18:0:0:18,0:659,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:25.1974:5:0:0:5,0:178,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:18.7051:7:7:253:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 1|1:49.2798:13:0:0:13,0:473,0:-10,-3.91339,0,-10,-3.91339,-10 0|1:99:25:16:581:9,0:341,0:-10,0,-10,-10,-10,-10 0|1:99:24:15:552:9,0:339,0:-10,0,-10,-10,-10,-10 1|1:82.393:24:0:0:24,0:904,0:-10,-7.22472,0,-10,-7.22472,-10 1|1:70.3519:20:0:0:20,0:748,0:-10,-6.0206,0,-10,-6.0206,-10 0|1:99:22:16:605:6,0:219,0:-10,0,-10,-10,-10,-10 1|1:28.2077:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 0|1:99:14:6:218:8,0:299,0:-10,0,-10,-10,-10,-10 1|1:67.8631:28:1:16:27,0:997,0:-10,-5.38168,0,-10,-8.12781,-10 0|1:99:9:5:185:4,0:147,0:-10,0,-10,-10,-10,-10 1|1:97.44:29:0:0:29,0:1013,0:-10,-8.72987,0,-10,-8.72987,-10 1|1:46.2695:12:0:0:12,0:412,0:-10,-3.61236,0,-10,-3.61236,-10 0|1:45.1628:10:1:38:9,0:320,0:-10,0,-1.7897,-10,-4.49897,-10 0|0:30.7463:11:11:407:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 1|1:61.321:17:0:0:17,0:632,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:33.7566:12:12:448:0,0:0,0:0,-3.61236,-10,-3.61236,-10,-10 0|0:21.7154:8:8:293:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 1|1:37.2386:9:0:0:9,0:340,0:-10,-2.70927,0,-10,-2.70927,-10 0|1:99:27:15:564:12,0:408,0:-10,0,-10,-10,-10,-10 0|0:27.736:10:10:369:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|1:0.73664:6:6:222:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 1|1:70.3519:20:0:0:20,0:745,0:-10,-6.0206,0,-10,-6.0206,-10 1|1:40.2489:10:0:0:10,0:378,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:54.8287:19:19:720:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:45.7978:16:16:603:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 1|1:37.2386:9:0:0:9,0:315,0:-10,-2.70927,0,-10,-2.70927,-10 0|1:99:24:12:430:12,0:447,0:-10,0,-10,-10,-10,-10 1|1:37.2386:9:0:0:9,0:330,0:-10,-2.70927,0,-10,-2.70927,-10 0|1:99:11:5:181:6,0:223,0:-10,0,-10,-10,-10,-10 0|1:99:22:16:592:6,0:228,0:-10,0,-10,-10,-10,-10 1|1:43.2592:11:0:0:11,0:417,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:27.736:10:10:377:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 1|1:76.3725:22:0:0:22,0:817,0:-10,-6.62266,0,-10,-6.62266,-10 1|1:49.2798:13:0:0:13,0:468,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:37.2386:9:0:0:9,0:337,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:82.393:24:0:0:24,0:849,0:-10,-7.22472,0,-10,-7.22472,-10 1|1:58.3107:16:0:0:16,0:579,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:52.2901:14:0:0:14,0:531,0:-10,-4.21442,0,-10,-4.21442,-10 0|1:99:26:16:583:10,0:302,0:-10,0,-10,-10,-10,-10 1|1:40.2489:10:0:0:10,0:370,0:-10,-3.0103,0,-10,-3.0103,-10 0|1:99:28:12:446:16,0:607,0:-10,0,-10,-10,-10,-10 0|0:36.7669:13:13:492:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 1|1:37.2386:9:0:0:9,0:325,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:82.393:24:0:0:24,0:864,0:-10,-7.22472,0,-10,-7.22472,-10 1|1:37.2386:9:0:0:9,0:335,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:52.2901:14:0:0:14,0:524,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:31.218:7:0:0:7,0:244,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:58.3107:16:0:0:16,0:576,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:40.2489:10:0:0:10,0:380,0:-10,-3.0103,0,-10,-3.0103,-10 0|1:99:21:13:491:8,0:304,0:-10,0,-10,-10,-10,-10 1|1:43.2592:11:0:0:11,0:412,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:61.321:17:0:0:17,0:596,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:48.8081:17:17:638:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 1|1:40.2489:10:0:0:10,0:356,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:76.3725:22:0:0:22,0:799,0:-10,-6.62266,0,-10,-6.62266,-10 1|1:61.321:17:0:0:17,0:618,0:-10,-5.11751,0,-10,-5.11751,-10 0|1:0.352721:5:5:190:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|1:99:23:9:327:13,0:455,0:-10,0,-10,-10,-10,-10 0|0:21.7154:8:8:291:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 1|1:58.3107:16:0:0:16,0:504,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:97.44:29:0:0:29,0:1042,0:-10,-8.72987,0,-10,-8.72987,-10 1|1:49.2798:13:0:0:13,0:490,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:43.2592:11:0:0:11,0:417,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:49.2798:13:0:0:13,0:485,0:-10,-3.91339,0,-10,-3.91339,-10 0|1:0.73664:7:6:226:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 1|1:22.3467:13:0:0:0,13:0,493:-10,-10,-10,-3.91339,-3.91339,0 1|1:55.3004:15:0:0:15,0:527,0:-10,-4.51545,0,-10,-4.51545,-10 0|1:0.000264025:1:0:0:0,1:0,38:-3.8,-3.8,-3.8,-0.30103,-0.30103,0 1|1:0.0013156:4:0:0:0,4:0,152:-10,-10,-10,-1.20412,-1.20412,0 1|1:99:28:0:0:16,12:585,448:-10,-10,-10,-10,0,-10 0|1:99:19:7:265:0,12:0,398:-10,-10,-10,0,-10,-10 1|1:99:9:0:0:4,5:152,190:-10,-10,-10,-10,0,-10 1|1:99:19:0:0:10,9:367,327:-10,-10,-10,-10,0,-10 0|1:99:10:4:137:6,0:214,0:-10,0,-10,-10,-10,-10 0|0:24.7257:9:9:328:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 1|1:25.1974:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:40.2489:10:0:0:10,0:356,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:13.1561:1:0:0:1,0:38,0:-3.8,-0.30103,0,-3.8,-0.30103,-3.8 1|1:99:19:0:0:11,8:408,304:-10,-10,-10,-10,0,-10 1|1:99:15:0:0:7,8:266,278:-10,-10,-10,-10,0,-10 1|1:37.2386:9:0:0:9,0:305,0:-10,-2.70927,0,-10,-2.70927,-10 scaffold_202 511261 . T C 28116.8 . AB=0.62069;ABP=21.3555;AC=15;AF=0.0815217;AN=184;AO=121;CIGAR=2X;DP=1342;DPB=1342;DPRA=0.983706;EPP=3.88966;EPPR=7.54613;GTI=8;LEN=1;MEANALT=1.38462;MQM=60;MQMR=59.9484;NS=92;NUMALT=2;ODDS=0.317847;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4346;QR=12923;RO=349;RPP=265.758;RPPR=718.047;RUN=1;SAF=57;SAP=3.88966;SAR=64;SRF=156;SRP=11.5282;SRR=193;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|1:0.0850122:10:0:0:0,10:0,344:-10,-10,-10,-3.0103,-3.0103,0 0|1:0.0422981:9:0:0:0,9:0,320:-10,-10,-10,-2.70927,-2.70927,0 1|1:37.3982:18:0:0:0,18:0,628:-10,-10,-10,-5.41854,-5.41854,0 0|1:0.57745:12:0:0:0,12:0,426:-10,-10,-10,-3.61236,-3.61236,0 0|0:99:16:8:298:7,0:237,0:-10,0,-10,-10,-10,-10 0|0:40.2489:10:0:0:10,0:377,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:99:24:15:557:9,0:342,0:-10,0,-10,-10,-10,-10 0|0:88.4131:26:0:0:26,0:929,0:-10,-7.82678,0,-10,-7.82678,-10 0|0:64.3313:18:0:0:18,0:659,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:25.1974:5:0:0:5,0:178,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:18.7051:7:7:253:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|0:49.2798:13:0:0:13,0:473,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:99:25:16:581:9,0:341,0:-10,0,-10,-10,-10,-10 0|0:99:24:15:552:9,0:339,0:-10,0,-10,-10,-10,-10 0|0:82.393:24:0:0:24,0:904,0:-10,-7.22472,0,-10,-7.22472,-10 0|0:70.3519:20:0:0:20,0:748,0:-10,-6.0206,0,-10,-6.0206,-10 0|0:99:22:16:605:6,0:219,0:-10,0,-10,-10,-10,-10 0|0:28.2077:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:99:14:6:218:8,0:299,0:-10,0,-10,-10,-10,-10 0|0:67.8631:28:1:16:27,0:997,0:-10,-5.38168,0,-10,-8.12781,-10 0|0:99:9:5:185:4,0:147,0:-10,0,-10,-10,-10,-10 0|0:97.44:29:0:0:29,0:1013,0:-10,-8.72987,0,-10,-8.72987,-10 0|0:46.2695:12:0:0:12,0:412,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:45.1628:10:1:38:9,0:320,0:-10,0,-1.7897,-10,-4.49897,-10 0|0:30.7463:11:11:407:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:61.321:17:0:0:17,0:632,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:33.7566:12:12:448:0,0:0,0:0,-3.61236,-10,-3.61236,-10,-10 0|0:21.7154:8:8:293:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:37.2386:9:0:0:9,0:340,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:99:27:15:564:12,0:408,0:-10,0,-10,-10,-10,-10 0|0:27.736:10:10:369:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:0.73664:6:6:222:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|0:70.3519:20:0:0:20,0:745,0:-10,-6.0206,0,-10,-6.0206,-10 0|0:40.2489:10:0:0:10,0:378,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:54.8287:19:19:720:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:45.7978:16:16:603:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:37.2386:9:0:0:9,0:315,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:99:24:12:430:12,0:447,0:-10,0,-10,-10,-10,-10 0|0:37.2386:9:0:0:9,0:330,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:99:11:5:181:6,0:223,0:-10,0,-10,-10,-10,-10 0|0:99:22:16:592:6,0:228,0:-10,0,-10,-10,-10,-10 0|0:43.2592:11:0:0:11,0:417,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:27.736:10:10:377:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:76.3725:22:0:0:22,0:817,0:-10,-6.62266,0,-10,-6.62266,-10 0|0:49.2798:13:0:0:13,0:468,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:37.2386:9:0:0:9,0:337,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:82.393:24:0:0:24,0:849,0:-10,-7.22472,0,-10,-7.22472,-10 0|0:58.3107:16:0:0:16,0:579,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:52.2901:14:0:0:14,0:531,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:99:26:16:583:10,0:302,0:-10,0,-10,-10,-10,-10 0|0:40.2489:10:0:0:10,0:370,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:99:28:12:446:16,0:607,0:-10,0,-10,-10,-10,-10 0|0:36.7669:13:13:492:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:37.2386:9:0:0:9,0:325,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:82.393:24:0:0:24,0:864,0:-10,-7.22472,0,-10,-7.22472,-10 0|0:37.2386:9:0:0:9,0:335,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:52.2901:14:0:0:14,0:524,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:31.218:7:0:0:7,0:244,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:58.3107:16:0:0:16,0:576,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:40.2489:10:0:0:10,0:380,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:99:21:13:491:8,0:304,0:-10,0,-10,-10,-10,-10 0|0:43.2592:11:0:0:11,0:412,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:61.321:17:0:0:17,0:596,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:48.8081:17:17:638:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:40.2489:10:0:0:10,0:356,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:76.3725:22:0:0:22,0:799,0:-10,-6.62266,0,-10,-6.62266,-10 0|0:61.321:17:0:0:17,0:618,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:0.352721:5:5:190:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:99:23:9:327:13,0:455,0:-10,0,-10,-10,-10,-10 0|0:21.7154:8:8:291:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:58.3107:16:0:0:16,0:504,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:97.44:29:0:0:29,0:1042,0:-10,-8.72987,0,-10,-8.72987,-10 0|0:49.2798:13:0:0:13,0:490,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:43.2592:11:0:0:11,0:417,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:49.2798:13:0:0:13,0:485,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:0.73664:7:6:226:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 1|1:22.3467:13:0:0:0,13:0,493:-10,-10,-10,-3.91339,-3.91339,0 0|0:55.3004:15:0:0:15,0:527,0:-10,-4.51545,0,-10,-4.51545,-10 0|1:0.000264025:1:0:0:0,1:0,38:-3.8,-3.8,-3.8,-0.30103,-0.30103,0 0|1:0.0013156:4:0:0:0,4:0,152:-10,-10,-10,-1.20412,-1.20412,0 0|1:99:28:0:0:16,12:585,448:-10,-10,-10,-10,0,-10 0|1:99:19:7:265:0,12:0,398:-10,-10,-10,0,-10,-10 0|1:99:9:0:0:4,5:152,190:-10,-10,-10,-10,0,-10 0|1:99:19:0:0:10,9:367,327:-10,-10,-10,-10,0,-10 0|0:99:10:4:137:6,0:214,0:-10,0,-10,-10,-10,-10 0|0:24.7257:9:9:328:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:25.1974:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:40.2489:10:0:0:10,0:356,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:13.1561:1:0:0:1,0:38,0:-3.8,-0.30103,0,-3.8,-0.30103,-3.8 0|1:99:19:0:0:11,8:408,304:-10,-10,-10,-10,0,-10 0|1:99:15:0:0:7,8:266,278:-10,-10,-10,-10,0,-10 0|0:37.2386:9:0:0:9,0:305,0:-10,-2.70927,0,-10,-2.70927,-10 scaffold_202 576086 . G C 489.547 . AB=0.740741;ABP=16.6021;AC=2;AF=0.0108696;AN=184;AO=21;CIGAR=1X;DP=1255;DPB=1255;DPRA=1.05253;EPP=3.94093;EPPR=23.9683;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9212;NS=92;NUMALT=1;ODDS=5.27998;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=764;QR=44258;RO=1231;RPP=48.6112;RPPR=2676.09;RUN=1;SAF=9;SAP=3.94093;SAR=12;SRF=561;SRP=23.9683;SRR=670;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.0741:10:10:360:0:0:0,-3.0103,-10 0/0:47.0741:10:10:348:0:0:0,-3.0103,-10 0/0:50.0844:11:11:413:0:0:0,-3.31133,-10 0/0:53.0947:12:12:423:0:0:0,-3.61236,-10 0/0:53.0947:12:12:424:0:0:0,-3.61236,-10 0/0:44.0638:9:9:331:0:0:0,-2.70927,-10 0/0:80.1874:21:21:731:0:0:0,-6.32163,-10 0/0:86.2079:23:23:821:0:0:0,-6.92369,-10 0/0:47.0741:10:10:349:0:0:0,-3.0103,-10 0/0:32.0226:5:5:190:0:0:0,-1.50515,-10 0/0:35.0329:6:6:192:0:0:0,-1.80618,-10 0/0:32.0226:5:5:175:0:0:0,-1.50515,-10 0/0:83.1977:22:22:773:0:0:0,-6.62266,-10 0/0:68.1462:17:17:641:0:0:0,-5.11751,-10 0/0:98.2472:27:27:950:0:0:0,-8.12781,-10 0/0:71.1565:18:18:644:0:0:0,-5.41854,-10 0/0:62.1256:15:15:538:0:0:0,-4.51545,-10 0/0:35.0329:7:6:189:0:0:0,-1.80618,-10 0/0:50.0844:11:11:413:0:0:0,-3.31133,-10 0/0:98.2472:27:27:1018:0:0:0,-8.12781,-10 0/0:47.0741:10:10:372:0:0:0,-3.0103,-10 0/1:99:22:7:266:15:561:-10,0,-10 0/0:41.0535:8:8:303:0:0:0,-2.40824,-10 0/0:62.1256:15:15:532:0:0:0,-4.51545,-10 0/0:59.1153:14:14:504:0:0:0,-4.21442,-10 0/0:38.0432:7:7:261:0:0:0,-2.10721,-10 0/0:71.1565:18:18:674:0:0:0,-5.41854,-10 0/0:41.0535:8:8:240:0:0:0,-2.40824,-10 0/0:41.0535:8:8:280:0:0:0,-2.40824,-10 0/0:83.1977:22:22:756:0:0:0,-6.62266,-10 0/0:22.9917:2:2:76:0:0:0,-0.60206,-7.22 0/0:32.0226:5:5:189:0:0:0,-1.50515,-10 0/1:2.54226e-05:5:0:0:5:188:-10,-1.50515,0 0/0:29.0123:4:4:148:0:0:0,-1.20412,-10 0/0:80.1874:21:21:756:0:0:0,-6.32163,-10 0/0:41.0535:8:8:304:0:0:0,-2.40824,-10 0/0:41.0535:8:8:279:0:0:0,-2.40824,-10 0/0:89.2181:24:24:880:0:0:0,-7.22472,-10 0/0:56.105:13:13:481:0:0:0,-3.91339,-10 0/0:56.105:13:13:439:0:0:0,-3.91339,-10 0/0:59.1153:14:14:513:0:0:0,-4.21442,-10 0/0:65.1359:16:16:581:0:0:0,-4.81648,-10 0/0:65.1359:16:16:594:0:0:0,-4.81648,-10 0/0:92.2281:25:25:855:0:0:0,-7.52575,-10 0/0:53.0947:12:12:420:0:0:0,-3.61236,-10 0/0:53.0947:12:12:427:0:0:0,-3.61236,-10 0/0:77.1771:20:20:742:0:0:0,-6.0206,-10 0/0:77.1771:20:20:736:0:0:0,-6.0206,-10 0/0:71.1565:18:18:624:0:0:0,-5.41854,-10 0/0:77.1771:20:20:755:0:0:0,-6.0206,-10 0/0:47.0741:10:10:369:0:0:0,-3.0103,-10 0/0:92.2281:25:25:909:0:0:0,-7.52575,-10 0/0:53.0947:12:12:443:0:0:0,-3.61236,-10 0/0:38.0432:7:7:263:0:0:0,-2.10721,-10 0/0:99:31:30:1098:0:0:0,-9.0309,-10 0/0:50.0844:11:11:362:0:0:0,-3.31133,-10 0/0:44.0638:9:9:302:0:0:0,-2.70927,-10 0/0:29.0123:4:4:151:0:0:0,-1.20412,-10 0/0:59.1153:14:14:479:0:0:0,-4.21442,-10 0/0:47.0741:10:10:345:0:0:0,-3.0103,-10 0/0:71.1565:18:18:604:0:0:0,-5.41854,-10 0/0:47.0741:10:10:370:0:0:0,-3.0103,-10 0/0:99:29:29:1036:0:0:0,-8.72987,-10 0/0:44.0638:9:9:318:0:0:0,-2.70927,-10 0/0:41.0535:8:8:278:0:0:0,-2.40824,-10 0/0:74.1668:19:19:703:0:0:0,-5.71957,-10 0/0:77.1771:20:20:711:0:0:0,-6.0206,-10 0/0:29.0123:4:4:120:0:0:0,-1.20412,-10 0/0:86.2079:24:23:799:0:0:0,-6.92369,-10 0/0:32.0226:5:5:186:0:0:0,-1.50515,-10 0/0:83.1977:22:22:802:0:0:0,-6.62266,-10 0/0:77.1771:20:20:732:0:0:0,-6.0206,-10 0/0:56.105:13:13:486:0:0:0,-3.91339,-10 0/0:53.0947:12:12:386:0:0:0,-3.61236,-10 0/0:62.1256:15:15:570:0:0:0,-4.51545,-10 0/0:47.0741:10:10:365:0:0:0,-3.0103,-10 0/0:39.8892:16:15:550:1:15:0,-2.11236,-10 0/0:38.0432:7:7:237:0:0:0,-2.10721,-10 0/0:38.0432:7:7:239:0:0:0,-2.10721,-10 0/0:41.0535:8:8:299:0:0:0,-2.40824,-10 0/0:99:29:29:1057:0:0:0,-8.72987,-10 0/0:68.1462:17:17:599:0:0:0,-5.11751,-10 0/0:50.0844:11:11:417:0:0:0,-3.31133,-10 0/0:56.105:13:13:480:0:0:0,-3.91339,-10 0/0:62.1256:15:15:552:0:0:0,-4.51545,-10 0/0:35.0329:6:6:227:0:0:0,-1.80618,-10 0/0:50.0844:11:11:412:0:0:0,-3.31133,-10 0/0:50.0844:11:11:399:0:0:0,-3.31133,-10 0/0:44.0638:9:9:342:0:0:0,-2.70927,-10 0/0:65.1359:16:16:549:0:0:0,-4.81648,-10 0/0:53.0947:12:12:433:0:0:0,-3.61236,-10 0/0:47.0741:10:10:369:0:0:0,-3.0103,-10 scaffold_202 618555 . C T 3521.93 . AB=0.626263;ABP=16.7191;AC=12;AF=0.0652174;AN=184;AO=140;CIGAR=1X;DP=1711;DPB=1711;DPRA=1.19219;EPP=4.56135;EPPR=7.98947;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9726;NS=92;NUMALT=1;ODDS=1.13575;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5032;QR=56826;RO=1570;RPP=307.016;RPPR=3343.09;RUN=1;SAF=75;SAP=4.56135;SAR=65;SRF=823;SRP=10.9991;SRR=747;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.4243:16:16:592:0:0:0,-4.81648,-10 0/0:49.3934:13:13:444:0:0:0,-3.91339,-10 0/0:73.4758:21:21:780:0:0:0,-6.32163,-10 0/0:28.3213:6:6:204:0:0:0,-1.80618,-10 0/0:34.3419:8:8:304:0:0:0,-2.40824,-10 0/0:37.3522:9:9:331:0:0:0,-2.70927,-10 0/0:99:32:32:1103:0:0:0,-9.63296,-10 0/0:85.5167:25:25:914:0:0:0,-7.52575,-10 0/0:34.3419:8:8:288:0:0:0,-2.40824,-10 0/0:16.2801:2:2:75:0:0:0,-0.60206,-7.125 0/0:34.3419:8:8:271:0:0:0,-2.40824,-10 0/0:40.3625:10:10:370:0:0:0,-3.0103,-10 0/0:82.5065:24:24:857:0:0:0,-7.22472,-10 0/0:76.486:22:22:785:0:0:0,-6.62266,-10 0/0:97.5586:29:29:1038:0:0:0,-8.72987,-10 1/1:49.0935:25:0:0:25:932:-10,-7.52575,0 0/0:73.4758:21:21:768:0:0:0,-6.32163,-10 0/0:49.3934:13:13:469:0:0:0,-3.91339,-10 0/0:35.0196:21:20:731:1:29:0,-2.09941,-10 0/0:94.5453:28:28:1046:0:0:0,-8.42884,-10 0/0:91.5377:27:27:979:0:0:0,-8.12781,-10 0/0:88.5266:27:26:958:0:0:0,-7.82678,-10 0/0:52.4037:14:14:517:0:0:0,-4.21442,-10 0/0:91.5377:27:27:962:0:0:0,-8.12781,-10 0/0:67.4552:19:19:689:0:0:0,-5.71957,-10 0/0:70.4655:20:20:712:0:0:0,-6.0206,-10 0/0:46.3831:12:12:454:0:0:0,-3.61236,-10 0/0:40.3625:10:10:367:0:0:0,-3.0103,-10 0/0:82.5065:24:24:845:0:0:0,-7.22472,-10 0/0:67.8423:28:27:959:1:16:0,-5.38168,-10 0/0:25.311:5:5:187:0:0:0,-1.50515,-10 0/0:31.3316:7:7:264:0:0:0,-2.10721,-10 0/0:67.4552:19:19:665:0:0:0,-5.71957,-10 0/0:37.3522:9:9:338:0:0:0,-2.70927,-10 0/0:46.3831:12:12:440:0:0:0,-3.61236,-10 0/0:25.311:5:5:190:0:0:0,-1.50515,-10 0/0:49.3934:13:13:449:0:0:0,-3.91339,-10 0/0:85.0606:34:33:1240:1:16:0,-7.10354,-10 0/0:70.4655:20:20:750:0:0:0,-6.0206,-10 0/0:40.3625:10:10:380:0:0:0,-3.0103,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:82.5065:24:24:874:0:0:0,-7.22472,-10 0/0:37.3522:9:9:331:0:0:0,-2.70927,-10 0/0:99:30:30:1068:0:0:0,-9.0309,-10 0/0:52.4037:14:14:531:0:0:0,-4.21442,-10 0/0:49.3934:13:13:461:0:0:0,-3.91339,-10 0/0:99:38:38:1394:0:0:0,-10,-10 0/0:70.4655:20:20:752:0:0:0,-6.0206,-10 0/0:37.3522:9:9:309:0:0:0,-2.70927,-10 0/0:85.0606:34:33:1196:1:16:0,-7.10354,-10 0/0:64.4449:18:18:621:0:0:0,-5.41854,-10 0/0:99:39:39:1327:0:0:0,-10,-10 0/0:40.3625:10:10:379:0:0:0,-3.0103,-10 0/0:25.311:5:5:166:0:0:0,-1.50515,-10 0/0:99:31:31:1122:0:0:0,-9.33193,-10 0/0:70.4655:20:20:747:0:0:0,-6.0206,-10 0/0:82.5065:24:24:862:0:0:0,-7.22472,-10 0/0:46.3831:12:12:448:0:0:0,-3.61236,-10 0/0:58.4243:16:16:553:0:0:0,-4.81648,-10 0/0:37.3522:9:9:329:0:0:0,-2.70927,-10 1/1:73.1759:33:0:0:33:1187:-10,-9.93399,0 0/0:79.4963:23:23:868:0:0:0,-6.92369,-10 0/0:99:44:44:1558:0:0:0,-10,-10 0/1:99:21:10:349:11:418:-10,0,-10 0/0:34.3419:8:8:302:0:0:0,-2.40824,-10 0/0:99:37:37:1288:0:0:0,-10,-10 0/0:79.4963:23:23:857:0:0:0,-6.92369,-10 0/1:0.943619:12:0:0:12:433:-10,-3.61236,0 0/1:99:24:16:587:8:302:-10,0,-10 0/1:0.107334:9:0:0:9:341:-10,-2.70927,0 0/0:49.3934:13:13:480:0:0:0,-3.91339,-10 0/0:97.5586:29:29:1054:0:0:0,-8.72987,-10 0/0:36.8961:17:16:601:1:16:0,-2.28706,-10 0/0:79.4963:23:23:834:0:0:0,-6.92369,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 1/1:9.95962:12:0:0:12:454:-10,-3.61236,0 0/0:49.3934:13:13:485:0:0:0,-3.91339,-10 0/0:20.4336:19:18:663:1:38:0,-0.640816,-10 0/0:19.2904:3:3:114:0:0:0,-0.90309,-10 0/0:46.3831:12:12:423:0:0:0,-3.61236,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:67.4552:19:19:706:0:0:0,-5.71957,-10 0/0:46.3831:12:12:423:0:0:0,-3.61236,-10 0/0:64.4449:18:18:631:0:0:0,-5.41854,-10 0/1:99:26:11:368:15:543:-10,0,-10 0/1:0.0265857:7:0:0:7:244:-10,-2.10721,0 0/0:46.6248:26:25:884:1:31:0,-3.31181,-10 0/0:49.3934:13:13:490:0:0:0,-3.91339,-10 0/0:22.3007:4:4:152:0:0:0,-1.20412,-10 0/0:61.4346:17:17:633:0:0:0,-5.11751,-10 0/0:82.5065:24:24:825:0:0:0,-7.22472,-10 0/0:34.149:16:15:517:1:16:0,-2.01236,-10 scaffold_202 716104 . T C 483.128 . AB=0.714286;ABP=14.1779;AC=2;AF=0.0108696;AN=184;AO=22;CIGAR=1X;DP=1645;DPB=1645;DPRA=1.18386;EPP=6.56362;EPPR=3.07586;GTI=1;LEN=1;MEANALT=1;MQM=59.5455;MQMR=59.968;NS=92;NUMALT=1;ODDS=6.74661;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=795;QR=59215;RO=1623;RPP=50.7827;RPPR=3527.31;RUN=1;SAF=8;SAP=6.56362;SAR=14;SRF=808;SRP=3.07586;SRR=815;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:92.5276:22:22:786:0:0:0,-6.62266,-10 0/0:53.3929:9:9:340:0:0:0,-2.70927,-10 0/0:92.5276:22:22:820:0:0:0,-6.62266,-10 0/0:71.4547:15:15:547:0:0:0,-4.51545,-10 0/0:38.3414:4:4:144:0:0:0,-1.20412,-10 0/1:2.37355e-05:8:0:0:8:301:-10,-2.40824,0 0/0:64.7805:29:28:1007:1:38:0,-3.46747,-10 0/0:95.5386:23:23:853:0:0:0,-6.92369,-10 0/0:83.4958:19:19:696:0:0:0,-5.71957,-10 0/0:32.3208:2:2:54:0:0:0,-0.60206,-5.13 0/0:44.362:6:6:193:0:0:0,-1.80618,-10 0/0:59.4135:11:11:409:0:0:0,-3.31133,-10 0/0:99:25:25:904:0:0:0,-7.52575,-10 0/0:99:30:30:1117:0:0:0,-9.0309,-10 0/0:99:27:27:1025:0:0:0,-8.12781,-10 0/1:99:20:8:301:12:440:-10,0,-10 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:53.3929:9:9:333:0:0:0,-2.70927,-10 0/0:83.4958:19:19:672:0:0:0,-5.71957,-10 0/0:83.4958:19:19:691:0:0:0,-5.71957,-10 0/0:89.5169:21:21:784:0:0:0,-6.32163,-10 0/0:68.4444:14:14:529:0:0:0,-4.21442,-10 0/0:44.362:6:6:225:0:0:0,-1.80618,-10 0/0:74.465:16:16:581:0:0:0,-4.81648,-10 0/0:86.506:20:20:728:0:0:0,-6.0206,-10 0/0:86.506:20:20:707:0:0:0,-6.0206,-10 0/0:89.5169:21:21:765:0:0:0,-6.32163,-10 0/0:74.465:16:16:584:0:0:0,-4.81648,-10 0/0:68.4444:14:14:526:0:0:0,-4.21442,-10 0/0:86.506:20:20:728:0:0:0,-6.0206,-10 0/0:44.362:6:6:226:0:0:0,-1.80618,-10 0/0:41.3517:5:5:168:0:0:0,-1.50515,-10 0/0:59.4135:11:11:393:0:0:0,-3.31133,-10 0/0:47.3723:7:7:250:0:0:0,-2.10721,-10 0/0:71.4547:15:15:568:0:0:0,-4.51545,-10 0/0:59.4135:11:11:418:0:0:0,-3.31133,-10 0/0:83.4958:19:19:696:0:0:0,-5.71957,-10 0/0:65.4341:13:13:444:0:0:0,-3.91339,-10 0/0:65.4341:13:13:487:0:0:0,-3.91339,-10 0/0:65.4341:13:13:481:0:0:0,-3.91339,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:99:34:34:1241:0:0:0,-10,-10 0/0:71.4547:15:15:542:0:0:0,-4.51545,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:92.5276:22:22:783:0:0:0,-6.62266,-10 0/0:86.506:20:20:720:0:0:0,-6.0206,-10 0/0:99:36:36:1335:0:0:0,-10,-10 0/0:99:27:27:1016:0:0:0,-8.12781,-10 0/0:74.465:16:16:607:0:0:0,-4.81648,-10 0/0:99:33:33:1179:0:0:0,-9.93399,-10 0/0:56.4032:10:10:358:0:0:0,-3.0103,-10 0/0:99:26:26:968:0:0:0,-7.82678,-10 0/0:71.4547:15:15:537:0:0:0,-4.51545,-10 0/0:38.3414:4:4:114:0:0:0,-1.20412,-10 0/0:99:43:43:1528:0:0:0,-10,-10 0/0:77.4753:17:17:608:0:0:0,-5.11751,-10 0/0:92.5276:22:22:791:0:0:0,-6.62266,-10 0/0:59.4135:11:11:418:0:0:0,-3.31133,-10 0/0:74.465:16:16:604:0:0:0,-4.81648,-10 0/0:65.4341:13:13:466:0:0:0,-3.91339,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:77.4753:17:17:582:0:0:0,-5.11751,-10 0/0:99:30:30:1055:0:0:0,-9.0309,-10 0/0:92.5276:22:22:783:0:0:0,-6.62266,-10 0/0:92.5276:22:22:805:0:0:0,-6.62266,-10 0/0:98.5433:24:24:899:0:0:0,-7.22472,-10 0/0:68.4444:14:14:509:0:0:0,-4.21442,-10 0/0:56.4032:10:10:372:0:0:0,-3.0103,-10 0/0:80.4856:18:18:656:0:0:0,-5.41854,-10 0/0:53.3929:9:9:340:0:0:0,-2.70927,-10 0/0:89.5169:21:21:764:0:0:0,-6.32163,-10 0/0:81.0702:27:26:936:1:16:0,-5.09645,-10 0/0:83.4958:19:19:720:0:0:0,-5.71957,-10 0/0:83.4958:19:19:704:0:0:0,-5.71957,-10 0/0:99:34:34:1227:0:0:0,-10,-10 0/0:59.4135:11:11:397:0:0:0,-3.31133,-10 0/0:86.506:20:20:755:0:0:0,-6.0206,-10 0/0:50.3826:8:8:260:0:0:0,-2.40824,-10 0/0:41.3517:5:5:190:0:0:0,-1.50515,-10 0/0:80.4856:18:18:637:0:0:0,-5.41854,-10 0/0:99:37:37:1363:0:0:0,-10,-10 0/0:80.4856:18:18:657:0:0:0,-5.41854,-10 0/0:99:31:31:1174:0:0:0,-9.33193,-10 0/0:86.506:20:20:717:0:0:0,-6.0206,-10 0/0:77.4753:17:17:644:0:0:0,-5.11751,-10 0/0:47.3723:7:7:261:0:0:0,-2.10721,-10 0/0:68.4444:14:14:506:0:0:0,-4.21442,-10 0/0:65.4341:13:13:491:0:0:0,-3.91339,-10 0/0:29.3105:1:1:29:0:0:0,-0.30103,-2.9 0/0:65.4341:13:13:468:0:0:0,-3.91339,-10 0/0:74.465:16:16:564:0:0:0,-4.81648,-10 0/0:62.4238:12:12:429:0:0:0,-3.61236,-10 scaffold_202 759842 . G A 18884.4 . AB=0.491071;ABP=3.32051;AC=55;AF=0.298913;AN=184;AO=654;CIGAR=1X;DP=2104;DPB=2104;DPRA=1.23935;EPP=6.84856;EPPR=25.3001;GTI=1;LEN=1;MEANALT=1;MQM=59.9526;MQMR=59.9745;NS=92;NUMALT=1;ODDS=0.0748464;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=24137;QR=52496;RO=1450;RPP=1371.52;RPPR=3005.72;RUN=1;SAF=316;SAP=4.61732;SAR=338;SRF=681;SRP=14.6075;SRR=769;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:24.0876:24:23:862:1:38:0,-2.04451,-10 0/1:0.395116:2:2:76:0:0:0,-0.60206,-7.22 0/0:79.2029:26:26:975:0:0:0,-7.82678,-10 0/0:25.0175:8:8:288:0:0:0,-2.40824,-10 0/0:15.9866:5:5:185:0:0:0,-1.50515,-10 0/0:12.9763:4:4:152:0:0:0,-1.20412,-10 0/0:99:50:50:1817:0:0:0,-10,-10 0/0:79.2029:26:26:961:0:0:0,-7.82678,-10 0/0:37.0587:12:12:446:0:0:0,-3.61236,-10 0/0:22.0072:7:7:257:0:0:0,-2.10721,-10 1/1:26.2029:12:0:0:12:432:-10,-3.61236,0 0/0:25.0175:8:8:299:0:0:0,-2.40824,-10 0/1:99:17:9:342:8:303:-10,0,-10 1/1:98.445:36:0:0:36:1317:-10,-10,0 0/0:73.1823:24:24:832:0:0:0,-7.22472,-10 0/0:61.1411:20:20:739:0:0:0,-6.0206,-10 0/0:94.2525:31:31:1100:0:0:0,-9.33193,-10 0/0:34.0484:11:11:395:0:0:0,-3.31133,-10 0/1:99:26:11:404:15:544:-10,0,-10 1/1:99:54:0:0:54:1985:-10,-10,0 0/1:99:15:5:185:10:375:-10,0,-10 0/1:99:27:14:527:13:489:-10,0,-10 1/1:17.172:9:0:0:9:342:-10,-2.70927,0 1/1:38.2441:16:0:0:16:604:-10,-4.81648,0 0/0:91.2432:30:30:1045:0:0:0,-9.0309,-10 0/1:99:30:14:498:16:606:-10,0,-10 0/0:49.0999:16:16:580:0:0:0,-4.81648,-10 0/0:52.1102:17:17:629:0:0:0,-5.11751,-10 1/1:62.3265:24:0:0:24:898:-10,-7.22472,0 0/1:99:51:18:588:33:1195:-10,0,-10 0/0:9.96602:3:3:104:0:0:0,-0.90309,-9.70667 0/1:33.5355:9:8:295:1:38:-2.04497,0,-10 0/0:73.1823:24:24:858:0:0:0,-7.22472,-10 1/1:14.1617:8:0:0:8:296:-10,-2.40824,0 0/0:46.0896:15:15:493:0:0:0,-4.51545,-10 0/0:25.0175:8:8:302:0:0:0,-2.40824,-10 1/1:23.1926:11:0:0:11:383:-10,-3.31133,0 0/1:99:33:17:613:16:594:-10,0,-10 1/1:35.2338:15:0:0:15:567:-10,-4.51545,0 0/1:99:16:10:370:6:228:-10,0,-10 0/1:99:34:17:596:17:599:-10,0,-10 0/0:44.7414:31:30:1065:1:38:0,-4.04057,-10 0/0:76.1926:25:25:934:0:0:0,-7.52575,-10 0/1:99:38:16:592:22:829:-10,0,-10 0/1:99:34:22:808:12:438:-10,0,-10 1/1:44.2647:18:0:0:18:673:-10,-5.41854,0 1/1:99:63:0:0:63:2328:-10,-10,0 1/1:74.3676:28:0:0:28:1035:-10,-8.42884,0 1/1:32.2235:14:0:0:14:521:-10,-4.21442,0 0/1:99:54:29:1030:25:926:-10,0,-10 1/1:8.14105:6:0:0:6:201:-10,-1.80618,0 0/1:99:64:38:1385:26:977:-10,0,-10 0/0:43.0793:14:14:499:0:0:0,-4.21442,-10 1/1:8.14105:6:0:0:6:228:-10,-1.80618,0 1/1:99:50:0:0:50:1833:-10,-10,0 1/1:23.1926:11:0:0:11:410:-10,-3.31133,0 1/1:62.3265:24:0:0:24:901:-10,-7.22472,0 0/0:15.9866:5:5:164:0:0:0,-1.50515,-10 0/0:52.1102:17:17:617:0:0:0,-5.11751,-10 0/0:43.0793:14:14:530:0:0:0,-4.21442,-10 0/0:94.2525:31:31:1107:0:0:0,-9.33193,-10 0/0:64.1514:21:21:753:0:0:0,-6.32163,-10 0/0:99:55:55:2036:0:0:0,-10,-10 0/0:58.1525:28:27:979:1:16:0,-5.38168,-10 0/0:79.2029:26:26:950:0:0:0,-7.82678,-10 0/0:58.1525:28:27:940:1:16:0,-5.38168,-10 0/0:82.2131:27:27:1001:0:0:0,-8.12781,-10 0/0:52.1102:17:17:601:0:0:0,-5.11751,-10 0/0:99:42:42:1482:0:0:0,-10,-10 0/0:37.0587:12:12:400:0:0:0,-3.61236,-10 0/0:67.1617:22:22:807:0:0:0,-6.62266,-10 0/0:97.2609:32:32:1211:0:0:0,-9.63296,-10 0/0:82.2131:27:27:1005:0:0:0,-8.12781,-10 0/0:99:38:38:1385:0:0:0,-10,-10 0/0:99:43:43:1586:0:0:0,-10,-10 0/0:64.1514:21:21:774:0:0:0,-6.32163,-10 0/0:28.0278:9:9:324:0:0:0,-2.70927,-10 0/0:88.2333:29:29:1060:0:0:0,-8.72987,-10 0/0:22.0072:7:7:266:0:0:0,-2.10721,-10 0/0:34.0484:11:11:354:0:0:0,-3.31133,-10 0/0:99:39:39:1388:0:0:0,-10,-10 0/0:91.2432:30:30:1096:0:0:0,-9.0309,-10 0/0:99:33:33:1173:0:0:0,-9.93399,-10 0/0:91.2432:30:30:1039:0:0:0,-9.0309,-10 0/0:97.2609:32:32:1193:0:0:0,-9.63296,-10 0/0:12.9763:4:4:152:0:0:0,-1.20412,-10 1/1:41.2544:17:0:0:17:635:-10,-5.11751,0 1/1:14.1617:8:0:0:8:299:-10,-2.40824,0 0/0:12.9763:4:4:152:0:0:0,-1.20412,-10 0/0:64.1514:21:21:759:0:0:0,-6.32163,-10 0/0:52.1102:17:17:613:0:0:0,-5.11751,-10 0/0:40.069:13:13:473:0:0:0,-3.91339,-10 scaffold_202 927121 . G A 579.841 . AB=0.590909;ABP=6.16881;AC=4;AF=0.0222222;AN=180;AO=27;CIGAR=1X;DP=1050;DPB=1050;DPRA=1.14024;EPP=61.6401;EPPR=2215.75;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=90;NUMALT=1;ODDS=1.18168;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=965;QR=37422;RO=1023;RPP=12.7417;RPPR=5.32187;RUN=1;SAF=8;SAP=12.7417;SAR=19;SRF=527;SRP=5.05017;SRR=496;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.2633:6:6:225:0:0:0,-1.80618,-10 0/0:41.253:5:5:190:0:0:0,-1.50515,-10 0/0:65.3354:13:13:482:0:0:0,-3.91339,-10 0/0:38.2427:4:4:152:0:0:0,-1.20412,-10 0/0:62.3251:12:12:453:0:0:0,-3.61236,-10 0/0:59.3148:11:11:403:0:0:0,-3.31133,-10 0/0:98.4458:24:24:879:0:0:0,-7.22472,-10 0/0:83.3971:19:19:713:0:0:0,-5.71957,-10 0/0:41.253:5:5:189:0:0:0,-1.50515,-10 0/0:35.2324:3:3:114:0:0:0,-0.90309,-10 0/0:38.2427:4:4:151:0:0:0,-1.20412,-10 0/0:41.253:5:5:179:0:0:0,-1.50515,-10 0/0:86.4076:20:20:743:0:0:0,-6.0206,-10 0/0:77.3766:17:17:546:0:0:0,-5.11751,-10 0/0:71.356:15:15:552:0:0:0,-4.51545,-10 0/0:80.3869:18:18:628:0:0:0,-5.41854,-10 0/0:86.4076:20:20:700:0:0:0,-6.0206,-10 0/0:44.2633:6:6:224:0:0:0,-1.80618,-10 0/0:77.3766:17:17:618:0:0:0,-5.11751,-10 0/1:99:14:7:266:7:257:-10,0,-10 0/1:99:12:4:126:8:279:-10,0,-10 0/0:77.3766:17:17:631:0:0:0,-5.11751,-10 0/0:44.2633:6:6:227:0:0:0,-1.80618,-10 0/0:50.2839:8:8:300:0:0:0,-2.40824,-10 0/0:65.3354:13:13:461:0:0:0,-3.91339,-10 0/0:65.3354:13:13:489:0:0:0,-3.91339,-10 0/0:35.2324:3:3:107:0:0:0,-0.90309,-9.98667 0/0:77.3766:17:17:637:0:0:0,-5.11751,-10 0/0:62.3251:12:12:441:0:0:0,-3.61236,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:41.253:5:5:188:0:0:0,-1.50515,-10 .:.:.:.:.:.:.:. 0/0:50.2839:8:8:304:0:0:0,-2.40824,-10 0/1:0.000989958:10:0:0:10:377:-10,-3.0103,0 0/0:68.3457:14:14:532:0:0:0,-4.21442,-10 .:.:.:.:.:.:.:. 0/0:53.2942:9:9:339:0:0:0,-2.70927,-10 0/0:59.3148:11:11:373:0:0:0,-3.31133,-10 0/0:59.3148:11:11:415:0:0:0,-3.31133,-10 0/0:71.356:15:15:558:0:0:0,-4.51545,-10 0/0:83.3971:19:19:682:0:0:0,-5.71957,-10 0/0:59.3148:11:11:390:0:0:0,-3.31133,-10 0/0:56.3045:10:10:352:0:0:0,-3.0103,-10 0/0:74.3663:16:16:584:0:0:0,-4.81648,-10 0/0:89.4179:21:21:773:0:0:0,-6.32163,-10 0/0:62.3251:12:12:455:0:0:0,-3.61236,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:62.3251:12:12:430:0:0:0,-3.61236,-10 0/0:44.2633:6:6:202:0:0:0,-1.80618,-10 0/0:99:25:25:943:0:0:0,-7.52575,-10 0/0:59.3148:11:11:401:0:0:0,-3.31133,-10 0/0:98.4458:24:24:837:0:0:0,-7.22472,-10 0/0:53.2942:9:9:339:0:0:0,-2.70927,-10 0/0:29.2118:1:1:38:0:0:0,-0.30103,-3.8 0/0:68.6474:22:21:747:1:16:0,-3.68024,-10 0/0:38.2427:4:4:149:0:0:0,-1.20412,-10 0/0:71.356:15:15:561:0:0:0,-4.51545,-10 0/0:47.2736:7:7:238:0:0:0,-2.10721,-10 0/0:47.2736:7:7:263:0:0:0,-2.10721,-10 0/0:41.253:5:5:190:0:0:0,-1.50515,-10 0/0:89.4179:21:21:773:0:0:0,-6.32163,-10 0/0:65.3354:13:13:461:0:0:0,-3.91339,-10 0/0:89.4179:21:21:775:0:0:0,-6.32163,-10 0/0:65.3354:13:13:460:0:0:0,-3.91339,-10 0/0:59.3148:11:11:405:0:0:0,-3.31133,-10 0/0:62.3251:12:12:429:0:0:0,-3.61236,-10 0/0:83.3971:19:19:702:0:0:0,-5.71957,-10 0/0:38.2427:4:4:137:0:0:0,-1.20412,-10 0/0:71.356:15:15:553:0:0:0,-4.51545,-10 0/0:38.2427:4:4:150:0:0:0,-1.20412,-10 0/0:56.3045:10:10:339:0:0:0,-3.0103,-10 0/0:83.3971:19:19:679:0:0:0,-5.71957,-10 0/0:65.3354:13:13:494:0:0:0,-3.91339,-10 0/0:50.2839:8:8:273:0:0:0,-2.40824,-10 0/0:74.3663:16:16:582:0:0:0,-4.81648,-10 0/0:29.2118:1:1:38:0:0:0,-0.30103,-3.8 0/0:56.3045:10:10:378:0:0:0,-3.0103,-10 0/0:38.2427:4:4:150:0:0:0,-1.20412,-10 0/0:38.2427:4:4:152:0:0:0,-1.20412,-10 0/0:32.2221:2:2:74:0:0:0,-0.60206,-7.03 0/0:59.3148:11:11:415:0:0:0,-3.31133,-10 0/0:53.2942:9:9:339:0:0:0,-2.70927,-10 0/0:86.4076:20:20:732:0:0:0,-6.0206,-10 0/0:59.3148:11:11:394:0:0:0,-3.31133,-10 0/0:65.3354:13:13:485:0:0:0,-3.91339,-10 0/0:35.2324:3:3:103:0:0:0,-0.90309,-9.61333 0/0:56.3045:10:10:354:0:0:0,-3.0103,-10 0/0:35.2324:3:3:114:0:0:0,-0.90309,-10 0/1:6.3206:8:7:249:1:36:-2.09485,0,-10 0/0:50.2839:8:8:304:0:0:0,-2.40824,-10 0/0:68.3457:14:14:525:0:0:0,-4.21442,-10 0/0:53.2942:9:9:341:0:0:0,-2.70927,-10 scaffold_202 994630 . A G 2433.17 . AB=0.614458;ABP=12.4549;AC=12;AF=0.0659341;AN=182;AO=96;CIGAR=1X;DP=1344;DPB=1344;DPRA=0.959064;EPP=3.37221;EPPR=24.5;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=91;NUMALT=1;ODDS=1.87073;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3482;QR=45733;RO=1245;RPP=211.472;RPPR=2697.81;RUN=1;SAF=50;SAP=3.37221;SAR=46;SRF=566;SRP=25.2814;SRR=679;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.2188:18:18:586:0:0:0,-5.41854,-10 0/0:40.1364:10:10:370:0:0:0,-3.0103,-10 0/0:46.157:12:12:452:0:0:0,-3.61236,-10 0/0:34.1158:8:8:304:0:0:0,-2.40824,-10 0/0:37.1261:9:9:339:0:0:0,-2.70927,-10 0/0:31.1055:7:7:266:0:0:0,-2.10721,-10 0/0:70.2394:20:20:749:0:0:0,-6.0206,-10 0/0:76.26:22:22:829:0:0:0,-6.62266,-10 0/0:40.1364:10:10:380:0:0:0,-3.0103,-10 0/0:22.0746:4:4:152:0:0:0,-1.20412,-10 0/0:25.0849:5:5:189:0:0:0,-1.50515,-10 0/0:31.1055:7:7:243:0:0:0,-2.10721,-10 0/0:70.2394:20:20:726:0:0:0,-6.0206,-10 0/0:82.2806:24:24:880:0:0:0,-7.22472,-10 0/0:79.2702:23:23:844:0:0:0,-6.92369,-10 0/0:61.2085:17:17:617:0:0:0,-5.11751,-10 0/0:43.1467:11:11:415:0:0:0,-3.31133,-10 0/0:28.0952:6:6:227:0:0:0,-1.80618,-10 0/0:58.1982:16:16:602:0:0:0,-4.81648,-10 0/0:97.3325:29:29:1065:0:0:0,-8.72987,-10 0/1:99:12:3:111:9:297:-10,0,-9.09006 0/1:99:18:8:273:10:380:-10,0,-10 0/0:52.1776:14:14:523:0:0:0,-4.21442,-10 0/0:61.2085:17:17:564:0:0:0,-5.11751,-10 0/0:43.1467:11:11:370:0:0:0,-3.31133,-10 0/0:76.26:22:22:830:0:0:0,-6.62266,-10 0/0:61.2085:17:17:638:0:0:0,-5.11751,-10 0/0:43.1467:11:11:415:0:0:0,-3.31133,-10 0/0:37.1261:9:9:340:0:0:0,-2.70927,-10 0/0:99:33:33:1227:0:0:0,-9.93399,-10 .:.:.:.:.:.:.:. 0/0:31.1055:7:7:266:0:0:0,-2.10721,-10 1/1:12.8116:13:0:0:13:487:-10,-3.91339,0 0/1:19.2364:9:8:294:1:38:-2.04497,0,-10 1/1:12.8116:13:0:0:13:464:-10,-3.91339,0 0/1:0.489899:11:0:0:11:411:-10,-3.31133,0 0/0:49.1673:13:13:479:0:0:0,-3.91339,-10 0/1:99:24:9:336:15:518:-10,0,-10 0/0:49.1673:13:13:486:0:0:0,-3.91339,-10 0/1:99:9:4:152:5:190:-10,0,-10 0/0:94.322:28:28:1048:0:0:0,-8.42884,-10 0/0:43.1467:11:11:385:0:0:0,-3.31133,-10 1/1:30.8734:19:0:0:19:697:-10,-5.71957,0 0/0:79.2702:23:23:869:0:0:0,-6.92369,-10 0/0:55.1879:15:15:563:0:0:0,-4.51545,-10 0/0:31.1055:7:7:266:0:0:0,-2.10721,-10 0/0:99:36:35:1217:0:0:0,-10,-10 0/0:64.2188:18:18:649:0:0:0,-5.41854,-10 0/0:22.0746:5:4:148:0:0:0,-1.20412,-10 0/0:76.26:22:22:815:0:0:0,-6.62266,-10 0/0:31.1055:7:7:258:0:0:0,-2.10721,-10 0/0:99:44:44:1568:0:0:0,-10,-10 0/0:31.1055:7:7:266:0:0:0,-2.10721,-10 0/0:13.0437:1:1:38:0:0:0,-0.30103,-3.8 0/0:88.3006:26:26:928:0:0:0,-7.82678,-10 0/0:25.0849:5:5:190:0:0:0,-1.50515,-10 0/0:46.157:12:12:453:0:0:0,-3.61236,-10 0/0:46.157:12:12:402:0:0:0,-3.61236,-10 0/0:37.1261:9:9:333:0:0:0,-2.70927,-10 0/0:46.157:12:12:448:0:0:0,-3.61236,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:52.1776:14:14:528:0:0:0,-4.21442,-10 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:46.157:12:12:433:0:0:0,-3.61236,-10 0/0:34.1158:8:8:292:0:0:0,-2.40824,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:46.157:12:12:429:0:0:0,-3.61236,-10 0/0:34.1158:8:8:304:0:0:0,-2.40824,-10 0/0:79.2702:23:23:866:0:0:0,-6.92369,-10 0/0:37.1261:9:9:337:0:0:0,-2.70927,-10 0/0:61.2085:17:17:621:0:0:0,-5.11751,-10 0/0:82.2806:24:24:887:0:0:0,-7.22472,-10 0/0:64.2188:18:18:657:0:0:0,-5.41854,-10 0/0:31.1055:7:7:257:0:0:0,-2.10721,-10 0/0:43.1467:11:11:402:0:0:0,-3.31133,-10 0/0:37.1261:9:9:341:0:0:0,-2.70927,-10 0/0:37.1261:9:9:319:0:0:0,-2.70927,-10 0/0:37.1261:9:9:342:0:0:0,-2.70927,-10 0/0:28.0952:6:6:228:0:0:0,-1.80618,-10 0/0:40.1364:10:10:377:0:0:0,-3.0103,-10 0/0:61.2085:17:17:639:0:0:0,-5.11751,-10 0/0:55.1879:15:15:553:0:0:0,-4.51545,-10 0/0:61.2085:17:17:638:0:0:0,-5.11751,-10 0/0:64.2188:18:18:669:0:0:0,-5.41854,-10 0/0:52.1776:14:14:514:0:0:0,-4.21442,-10 0/0:25.0849:5:5:186:0:0:0,-1.50515,-10 0/0:49.1673:13:13:481:0:0:0,-3.91339,-10 0/0:43.1467:11:11:415:0:0:0,-3.31133,-10 0/0:52.1776:14:14:523:0:0:0,-4.21442,-10 0/0:64.2188:19:18:641:0:0:0,-5.41854,-10 0/0:64.2188:18:18:655:0:0:0,-5.41854,-10 0/0:40.1364:10:10:379:0:0:0,-3.0103,-10 scaffold_202 1057465 . A C 8545.84 . AB=0.535135;ABP=4.99397;AC=24;AF=0.130435;AN=184;AO=310;CIGAR=1X;DP=2482;DPB=2482;DPRA=0.904436;EPP=3.26247;EPPR=3.58722;GTI=1;LEN=1;MEANALT=1;MQM=59.9968;MQMR=59.9709;NS=92;NUMALT=1;ODDS=1.17698;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11303;QR=79213;RO=2168;RPP=676.167;RPPR=4710.76;RUN=1;SAF=152;SAP=3.26247;SAR=158;SRF=1096;SRP=3.58722;SRR=1072;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:28.7633:21:0:0:21:723:-10,-6.32163,0 0/0:34.3109:9:9:338:0:0:0,-2.70927,-10 1/1:55.856:30:0:0:30:1096:-10,-9.0309,0 1/1:22.7427:19:0:0:19:712:-10,-5.71957,0 0/0:34.3109:9:9:307:0:0:0,-2.70927,-10 0/0:25.28:6:6:216:0:0:0,-1.80618,-10 0/0:99:47:47:1697:0:0:0,-10,-10 1/1:70.0279:52:1:38:51:1900:-10,-10,0 0/0:76.455:23:23:832:0:0:0,-6.92369,-10 0/0:40.3315:11:11:405:0:0:0,-3.31133,-10 0/0:49.3624:15:14:495:0:0:0,-4.21442,-10 0/0:37.3212:10:10:358:0:0:0,-3.0103,-10 0/0:99:42:42:1571:0:0:0,-10,-10 0/0:99:45:45:1667:0:0:0,-10,-10 0/1:99:31:15:521:16:578:-10,0,-10 0/0:97.5225:30:30:1078:0:0:0,-9.0309,-10 0/0:99:39:39:1467:0:0:0,-10,-10 0/0:67.4242:20:20:723:0:0:0,-6.0206,-10 0/0:99:32:32:1145:0:0:0,-9.63296,-10 0/0:99:51:51:1866:0:0:0,-10,-10 0/0:85.4857:26:26:915:0:0:0,-7.82678,-10 0/0:99:57:57:2060:0:0:0,-10,-10 0/0:40.3315:11:11:414:0:0:0,-3.31133,-10 0/0:99:40:40:1437:0:0:0,-10,-10 0/0:99:32:31:1161:0:0:0,-9.33193,-10 0/0:99:39:39:1462:0:0:0,-10,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:52.3727:15:15:562:0:0:0,-4.51545,-10 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/0:99:51:51:1844:0:0:0,-10,-10 0/0:34.3109:9:9:325:0:0:0,-2.70927,-10 0/0:37.3212:10:10:358:0:0:0,-3.0103,-10 0/0:85.4857:26:26:979:0:0:0,-7.82678,-10 0/0:64.4139:19:19:708:0:0:0,-5.71957,-10 0/0:73.4448:22:22:779:0:0:0,-6.62266,-10 0/0:37.3212:10:10:371:0:0:0,-3.0103,-10 0/0:58.3933:17:17:626:0:0:0,-5.11751,-10 0/0:99:35:35:1273:0:0:0,-10,-10 1/1:25.753:20:0:0:20:734:-10,-6.0206,0 0/0:82.4757:25:25:843:0:0:0,-7.52575,-10 0/0:99:35:35:1242:0:0:0,-10,-10 0/0:79.4654:24:24:876:0:0:0,-7.22472,-10 0/0:99:35:35:1241:0:0:0,-10,-10 0/0:99:34:34:1220:0:0:0,-10,-10 0/0:97.5225:30:30:1105:0:0:0,-9.0309,-10 0/0:76.455:23:23:858:0:0:0,-6.92369,-10 0/0:99:43:43:1605:0:0:0,-10,-10 0/0:85.4857:26:26:948:0:0:0,-7.82678,-10 0/0:61.4036:18:18:676:0:0:0,-5.41854,-10 0/0:99:52:52:1859:0:0:0,-10,-10 0/0:46.3521:13:13:461:0:0:0,-3.91339,-10 0/0:99:51:51:1832:0:0:0,-10,-10 0/0:67.4242:20:20:747:0:0:0,-6.0206,-10 0/0:37.3212:10:10:358:0:0:0,-3.0103,-10 0/0:99:44:44:1643:0:0:0,-10,-10 0/0:70.4345:21:21:789:0:0:0,-6.32163,-10 0/0:88.4964:27:27:961:0:0:0,-8.12781,-10 0/0:43.3418:12:12:442:0:0:0,-3.61236,-10 0/0:91.5068:28:28:1047:0:0:0,-8.42884,-10 0/1:6.69475:13:12:435:1:38:-1.00055,0,-10 0/0:99:42:42:1523:0:0:0,-10,-10 0/0:79.4654:25:24:849:0:0:0,-7.22472,-10 0/0:99:51:51:1819:0:0:0,-10,-10 0/0:99:33:33:1233:0:0:0,-9.93399,-10 0/0:58.3933:17:17:609:0:0:0,-5.11751,-10 0/0:99:42:42:1557:0:0:0,-10,-10 0/0:76.455:24:23:863:0:0:0,-6.92369,-10 0/0:70.4345:21:21:777:0:0:0,-6.32163,-10 0/0:99:44:44:1632:0:0:0,-10,-10 0/0:43.3418:12:12:447:0:0:0,-3.61236,-10 0/0:79.4654:24:24:894:0:0:0,-7.22472,-10 0/0:99:47:47:1755:0:0:0,-10,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:76.455:23:23:852:0:0:0,-6.92369,-10 0/0:99:41:41:1527:0:0:0,-10,-10 0/0:61.4036:18:18:669:0:0:0,-5.41854,-10 1/1:55.856:30:0:0:30:1095:-10,-9.0309,0 1/1:13.7118:16:0:0:16:553:-10,-4.81648,0 0/1:0.124804:9:0:0:9:328:-10,-2.70927,0 0/0:49.3624:14:14:527:0:0:0,-4.21442,-10 0/1:99:48:26:941:22:827:-10,0,-10 0/0:99:35:35:1283:0:0:0,-10,-10 0/1:99:28:13:457:15:561:-10,0,-10 0/1:99:27:13:472:14:475:-10,0,-10 0/0:88.4964:27:27:948:0:0:0,-8.12781,-10 0/0:22.2697:5:5:188:0:0:0,-1.50515,-10 0/0:76.455:23:23:869:0:0:0,-6.92369,-10 0/0:64.4139:19:19:713:0:0:0,-5.71957,-10 0/1:64.7938:7:1:38:6:228:-10,0,-2.53789 0/1:99:22:6:227:16:563:-10,0,-10 1/1:37.7942:24:0:0:24:892:-10,-7.22472,0 0/0:73.4448:22:22:773:0:0:0,-6.62266,-10 scaffold_202 1073773 . T C 301.12 . AB=0.521739;ABP=3.10471;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1677;DPB=1677;DPRA=1.61211;EPP=3.17734;EPPR=3.58614;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9645;NS=92;NUMALT=1;ODDS=7.39585;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=493;QR=61837;RO=1663;RPP=31.2394;RPPR=3614.17;RUN=1;SAF=7;SAP=3.17734;SAR=6;SRF=842;SRP=3.58614;SRR=821;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:77.2805:16:16:601:0:0:0,-4.81648,-10 0/0:44.1671:5:5:190:0:0:0,-1.50515,-10 0/0:92.3307:21:21:790:0:0:0,-6.32163,-10 0/0:77.2805:16:16:606:0:0:0,-4.81648,-10 0/0:53.198:8:8:301:0:0:0,-2.40824,-10 0/0:77.2805:16:16:608:0:0:0,-4.81648,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:99:25:25:925:0:0:0,-7.52575,-10 0/0:59.2186:10:10:376:0:0:0,-3.0103,-10 0/0:44.1671:5:5:185:0:0:0,-1.50515,-10 0/0:56.2083:9:9:342:0:0:0,-2.70927,-10 0/0:41.1568:4:4:140:0:0:0,-1.20412,-10 0/0:99:35:35:1321:0:0:0,-10,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:99:35:35:1319:0:0:0,-10,-10 0/0:71.2599:14:14:532:0:0:0,-4.21442,-10 0/0:86.311:19:19:703:0:0:0,-5.71957,-10 0/0:41.1568:4:4:149:0:0:0,-1.20412,-10 0/0:89.321:20:20:722:0:0:0,-6.0206,-10 0/0:81.8851:35:34:1264:1:38:0,-5.19198,-10 0/0:86.311:19:19:705:0:0:0,-5.71957,-10 0/0:99:38:38:1346:0:0:0,-10,-10 0/0:56.2083:9:9:333:0:0:0,-2.70927,-10 0/0:77.2805:16:16:602:0:0:0,-4.81648,-10 0/0:95.3398:22:22:803:0:0:0,-6.62266,-10 0/0:89.321:20:20:745:0:0:0,-6.0206,-10 0/0:62.2289:11:11:404:0:0:0,-3.31133,-10 0/0:65.2392:12:12:417:0:0:0,-3.61236,-10 0/0:86.311:19:19:683:0:0:0,-5.71957,-10 0/0:99:34:34:1281:0:0:0,-10,-10 0/0:44.1671:5:5:189:0:0:0,-1.50515,-10 0/0:77.2805:16:16:604:0:0:0,-4.81648,-10 0/0:80.2907:17:17:640:0:0:0,-5.11751,-10 0/0:62.2289:11:11:416:0:0:0,-3.31133,-10 0/0:99:24:24:887:0:0:0,-7.22472,-10 0/0:38.1465:3:3:114:0:0:0,-0.90309,-10 0/0:83.3009:18:18:633:0:0:0,-5.41854,-10 0/0:83.3009:19:18:673:0:0:0,-5.41854,-10 0/0:68.2496:13:13:481:0:0:0,-3.91339,-10 0/0:62.2289:11:11:388:0:0:0,-3.31133,-10 0/0:99:33:33:1249:0:0:0,-9.93399,-10 0/0:99:27:27:1016:0:0:0,-8.12781,-10 0/0:86.311:19:19:720:0:0:0,-5.71957,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:80.2907:17:17:618:0:0:0,-5.11751,-10 0/0:68.2496:13:13:484:0:0:0,-3.91339,-10 0/0:99:41:41:1481:0:0:0,-10,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:59.2186:10:10:380:0:0:0,-3.0103,-10 0/0:99:28:28:1047:0:0:0,-8.42884,-10 0/0:59.2186:10:10:379:0:0:0,-3.0103,-10 0/0:99:28:28:1017:0:0:0,-8.42884,-10 0/0:83.3009:18:18:684:0:0:0,-5.41854,-10 0/0:53.198:8:8:302:0:0:0,-2.40824,-10 0/0:99:33:33:1232:0:0:0,-9.93399,-10 0/0:71.2599:14:14:524:0:0:0,-4.21442,-10 0/0:98.3477:23:23:857:0:0:0,-6.92369,-10 0/0:56.2083:9:9:340:0:0:0,-2.70927,-10 0/0:80.2907:17:17:643:0:0:0,-5.11751,-10 0/0:92.3307:21:21:794:0:0:0,-6.32163,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:98.3477:23:23:862:0:0:0,-6.92369,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:86.311:19:19:676:0:0:0,-5.71957,-10 0/0:59.2186:10:10:360:0:0:0,-3.0103,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:65.2392:12:12:444:0:0:0,-3.61236,-10 0/0:50.1877:7:7:265:0:0:0,-2.10721,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:59.2186:10:10:378:0:0:0,-3.0103,-10 0/0:98.3477:23:23:854:0:0:0,-6.92369,-10 0/0:83.3009:18:18:676:0:0:0,-5.41854,-10 0/0:99:28:28:1038:0:0:0,-8.42884,-10 0/0:71.2599:14:14:509:0:0:0,-4.21442,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:53.198:8:8:304:0:0:0,-2.40824,-10 0/0:83.3009:18:18:679:0:0:0,-5.41854,-10 0/0:56.2083:9:9:340:0:0:0,-2.70927,-10 0/0:38.1465:3:3:91:0:0:0,-0.90309,-8.49333 0/0:44.1671:5:5:190:0:0:0,-1.50515,-10 0/0:99:28:28:1064:0:0:0,-8.42884,-10 0/0:99:30:30:1116:0:0:0,-9.0309,-10 0/1:99:23:11:411:12:455:-10,0,-10 0/0:68.2496:13:13:491:0:0:0,-3.91339,-10 0/0:86.311:19:19:722:0:0:0,-5.71957,-10 0/0:38.1465:3:3:91:0:0:0,-0.90309,-8.49333 0/0:83.3009:18:18:676:0:0:0,-5.41854,-10 0/0:80.2907:17:17:638:0:0:0,-5.11751,-10 0/0:32.1259:1:1:38:0:0:0,-0.30103,-3.8 0/0:53.198:8:8:304:0:0:0,-2.40824,-10 0/0:71.2599:14:14:525:0:0:0,-4.21442,-10 0/0:83.3009:18:18:676:0:0:0,-5.41854,-10 scaffold_202 1182594 . T A 38467.1 . AB=0.509695;ABP=3.30504;AC=136;AF=0.731183;AN=186;AO=1305;CIGAR=1X;DP=1843;DPB=1843;DPRA=0.998992;EPP=3.49119;EPPR=10.2104;GTI=1;LEN=1;MEANALT=1.05333;MQM=59.928;MQMR=59.9925;NS=93;NUMALT=1;ODDS=0.922555;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=48004;QR=19590;RO=532;RPP=2836.78;RPPR=1158.23;RUN=1;SAF=661;SAP=3.49119;SAR=644;SRF=245;SRP=10.2104;SRR=287;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:14.8099:16:1:38:15:566:-10,0,-0.18764 1/1:24.8082:9:0:0:9:307:-10,-2.70927,0 1/1:60.9318:21:0:0:21:795:-10,-6.32163,0 1/1:30.8288:11:0:0:11:395:-10,-3.31133,0 1/1:42.87:15:0:0:15:549:-10,-4.51545,0 1/1:12.767:6:0:0:5:188:-10,-1.50515,0 1/1:99:49:0:0:49:1805:-10,-10,0 1/1:82.0037:28:0:0:28:1054:-10,-8.42884,0 1/1:18.7876:7:0:0:7:266:-10,-2.10721,0 1/1:15.7773:6:0:0:6:228:-10,-1.80618,0 0/0:17.9703:10:10:376:0:0:0,-3.0103,-10 1/1:12.767:5:0:0:5:158:-10,-1.50515,0 0/1:99:24:13:491:11:396:-10,0,-10 0/0:66.1351:27:26:965:0:0:0,-7.82678,-10 1/1:57.9215:20:0:0:20:737:-10,-6.0206,0 1/1:99:34:0:0:34:1275:-10,-10,0 1/1:69.9627:25:0:0:24:895:-10,-7.22472,0 1/1:30.8288:11:0:0:11:372:-10,-3.31133,0 1/1:99:35:0:0:34:1269:-10,-10,0 0/0:99:48:48:1812:0:0:0,-10,-10 0/1:94.675:14:3:114:11:396:-10,0,-8.98668 0/1:99:26:14:525:12:441:-10,0,-10 0/0:11.9497:8:8:298:0:0:0,-2.40824,-10 0/0:45.063:19:19:700:0:0:0,-5.71957,-10 1/1:39.8597:14:0:0:14:484:-10,-4.21442,0 0/1:99:25:14:455:11:392:-10,0,-10 1/1:63.9421:22:0:0:22:829:-10,-6.62266,0 1/1:36.8494:13:0:0:13:494:-10,-3.91339,0 1/1:57.9215:20:0:0:20:683:-10,-6.0206,0 0/1:99:43:23:831:20:716:-10,0,-10 1/1:15.7773:6:0:0:6:225:-10,-1.80618,0 1/1:21.7979:8:0:0:8:304:-10,-2.40824,0 1/1:57.9215:20:0:0:20:736:-10,-6.0206,0 0/0:14.96:9:9:340:0:0:0,-2.70927,-10 1/1:42.87:15:0:0:15:541:-10,-4.51545,0 1/1:33.8391:12:0:0:12:454:-10,-3.61236,0 0/0:14.96:10:9:332:0:0:0,-2.70927,-10 0/1:99:32:19:673:13:435:-10,0,-10 1/1:45.8803:16:0:0:16:606:-10,-4.81648,0 0/1:99:17:10:380:7:244:-10,0,-10 0/1:99:34:22:794:12:443:-10,0,-10 1/1:22.0683:24:1:38:23:859:-10,-2.04451,0 1/1:54.9112:19:0:0:19:717:-10,-5.71957,0 0/1:99:26:8:304:18:650:-10,0,-10 0/1:99:19:9:339:10:376:-10,0,-10 0/0:42.0527:18:18:640:0:0:0,-5.41854,-10 0/0:99:53:53:1924:0:0:0,-10,-10 0/0:60.1145:24:24:881:0:0:0,-7.22472,-10 0/0:33.0218:15:15:563:0:0:0,-4.51545,-10 0/1:99:48:19:682:29:1059:-10,0,-10 0/0:42.0527:18:18:672:0:0:0,-5.41854,-10 0/1:99:36:21:750:14:510:-10,0,-10 1/1:45.8803:16:0:0:16:581:-10,-4.81648,0 0/0:14.96:9:9:340:0:0:0,-2.70927,-10 0/0:69.1454:27:27:1014:0:0:0,-8.12781,-10 0/0:20.9806:11:11:410:0:0:0,-3.31133,-10 0/0:51.0836:21:21:785:0:0:0,-6.32163,-10 1/1:39.8597:14:0:0:14:507:-10,-4.21442,0 1/1:36.8494:13:0:0:13:466:-10,-3.91339,0 1/1:27.8185:10:0:0:10:360:-10,-3.0103,0 1/1:82.0037:28:0:0:28:1036:-10,-8.42884,0 1/1:54.9112:19:0:0:19:692:-10,-5.71957,0 1/1:99:47:0:0:47:1730:-10,-10,0 1/1:42.87:15:0:0:15:561:-10,-4.51545,0 1/1:42.87:15:0:0:15:538:-10,-4.51545,0 1/1:99:36:0:0:36:1297:-10,-10,0 1/1:60.9318:21:0:0:21:786:-10,-6.32163,0 1/1:36.8494:13:0:0:13:493:-10,-3.91339,0 1/1:99:40:0:0:40:1484:-10,-10,0 1/1:36.8494:13:0:0:13:483:-10,-3.91339,0 1/1:42.87:15:0:0:15:546:-10,-4.51545,0 1/1:88.0237:30:0:0:30:1104:-10,-9.0309,0 1/1:91.0345:31:0:0:31:1115:-10,-9.33193,0 1/1:24.8082:9:0:0:9:340:-10,-2.70927,0 1/1:99:35:0:0:35:1308:-10,-10,0 1/1:69.9627:24:0:0:24:891:-10,-7.22472,0 1/1:45.8803:16:0:0:16:601:-10,-4.81648,0 1/1:42.87:15:0:0:15:564:-10,-4.51545,0 1/1:15.7773:6:0:0:6:222:-10,-1.80618,0 1/1:12.767:5:0:0:5:187:-10,-1.50515,0 1/1:99:42:0:0:42:1524:-10,-10,0 1/1:39.8597:14:0:0:14:531:-10,-4.21442,0 1/1:42.87:15:0:0:15:551:-10,-4.51545,0 1/1:51.9009:18:0:0:18:674:-10,-5.41854,0 1/1:75.9832:26:0:0:26:977:-10,-7.82678,0 1/1:9.75668:4:0:0:4:152:-10,-1.20412,0 0/0:36.0321:16:16:598:0:0:0,-4.81648,-10 0/0:30.0115:14:14:526:0:0:0,-4.21442,-10 1/1:12.767:5:0:0:5:190:-10,-1.50515,0 1/1:15.7773:6:0:0:6:213:-10,-1.80618,0 1/1:48.8906:17:0:0:17:641:-10,-5.11751,0 1/1:60.9318:21:0:0:21:772:-10,-6.32163,0 scaffold_202 1185309 . C A 129.359 . AB=0.28;ABP=13.5202;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=2177;DPB=2177;DPRA=1.6278;EPP=7.35324;EPPR=4.53585;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9949;NS=92;NUMALT=1;ODDS=13.6123;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=279;QR=78076;RO=2165;RPP=20.3821;RPPR=4704.25;RUN=1;SAF=2;SAP=7.35324;SAR=6;SRF=1063;SRP=4.53585;SRR=1102;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:18:18:643:0:0:0,-5.41854,-10 0/0:74.1688:6:6:228:0:0:0,-1.80618,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:98.2509:14:14:516:0:0:0,-4.21442,-10 0/0:92.2306:12:12:426:0:0:0,-3.61236,-10 0/0:95.2408:13:13:491:0:0:0,-3.91339,-10 0/0:99:48:48:1761:0:0:0,-10,-10 0/0:99:24:24:878:0:0:0,-7.22472,-10 0/0:99:20:20:729:0:0:0,-6.0206,-10 0/0:59.1174:1:1:38:0:0:0,-0.30103,-3.8 0/0:77.1791:7:7:236:0:0:0,-2.10721,-10 0/0:86.21:10:10:352:0:0:0,-3.0103,-10 0/0:99:42:42:1536:0:0:0,-10,-10 0/0:99:47:47:1586:0:0:0,-10,-10 0/0:99:22:22:777:0:0:0,-6.62266,-10 0/0:99:28:28:978:0:0:0,-8.42884,-10 0/0:99:29:29:1016:0:0:0,-8.72987,-10 0/0:95.2408:13:13:466:0:0:0,-3.91339,-10 0/0:99:21:21:774:0:0:0,-6.32163,-10 0/0:99:51:50:1811:1:16:0,-10,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:99:41:41:1464:0:0:0,-10,-10 0/0:80.1894:9:8:299:0:0:0,-2.40824,-10 0/0:99:18:18:674:0:0:0,-5.41854,-10 0/0:99:26:26:915:0:0:0,-7.82678,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:99:23:23:851:0:0:0,-6.92369,-10 0/0:95.2408:13:13:483:0:0:0,-3.91339,-10 0/0:99:26:26:863:0:0:0,-7.82678,-10 0/0:99:58:58:2110:0:0:0,-10,-10 0/0:68.1483:4:4:152:0:0:0,-1.20412,-10 0/0:71.1586:5:5:167:0:0:0,-1.50515,-10 0/0:99:15:15:509:0:0:0,-4.51545,-10 0/0:89.2203:11:11:408:0:0:0,-3.31133,-10 0/0:99:28:28:992:0:0:0,-8.42884,-10 0/0:74.1688:6:6:227:0:0:0,-1.80618,-10 0/0:92.2306:12:12:440:0:0:0,-3.61236,-10 0/0:99:29:29:1094:0:0:0,-8.72987,-10 0/0:99:20:20:716:0:0:0,-6.0206,-10 0/0:99:18:18:684:0:0:0,-5.41854,-10 0/0:99:42:42:1464:0:0:0,-10,-10 0/0:98.2509:14:14:506:0:0:0,-4.21442,-10 0/0:99:28:28:1003:0:0:0,-8.42884,-10 0/0:99:49:48:1752:0:0:0,-10,-10 0/0:99:34:34:1262:0:0:0,-10,-10 0/0:98.2509:14:14:528:0:0:0,-4.21442,-10 0/0:99:59:59:2094:0:0:0,-10,-10 0/0:99:31:31:1121:0:0:0,-9.33193,-10 0/0:99:16:16:477:0:0:0,-4.81648,-10 0/0:99:50:50:1783:0:0:0,-10,-10 0/0:68.1483:4:4:152:0:0:0,-1.20412,-10 0/0:99:57:57:1998:0:0:0,-10,-10 0/0:99:18:17:623:0:0:0,-5.11751,-10 0/0:68.1483:4:4:152:0:0:0,-1.20412,-10 0/0:99:62:62:2206:0:0:0,-10,-10 0/0:99:18:18:684:0:0:0,-5.41854,-10 0/0:99:19:19:696:0:0:0,-5.71957,-10 0/0:86.21:10:10:358:0:0:0,-3.0103,-10 0/0:99:20:20:748:0:0:0,-6.0206,-10 0/0:80.1894:8:8:300:0:0:0,-2.40824,-10 0/0:99:39:39:1424:0:0:0,-10,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:99:50:50:1767:0:0:0,-10,-10 0/0:99:21:21:719:0:0:0,-6.32163,-10 0/0:99:17:17:643:0:0:0,-5.11751,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:99:26:26:884:0:0:0,-7.82678,-10 0/0:80.1894:8:8:303:0:0:0,-2.40824,-10 0/0:99:42:42:1484:0:0:0,-10,-10 0/0:99:20:20:747:0:0:0,-6.0206,-10 0/0:99:24:24:874:0:0:0,-7.22472,-10 0/0:99:42:42:1553:0:0:0,-10,-10 0/0:99:15:15:525:0:0:0,-4.51545,-10 0/0:99:28:28:1008:0:0:0,-8.42884,-10 0/0:99:35:34:1249:0:0:0,-10,-10 0/0:98.2509:14:14:499:0:0:0,-4.21442,-10 0/0:83.1997:9:9:340:0:0:0,-2.70927,-10 0/0:99:16:16:598:0:0:0,-4.81648,-10 0/0:83.1997:9:9:316:0:0:0,-2.70927,-10 0/0:99:16:16:608:0:0:0,-4.81648,-10 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:99:34:34:1216:0:0:0,-10,-10 0/0:99:32:32:1143:0:0:0,-9.63296,-10 0/0:99:34:34:1280:0:0:0,-10,-10 0/1:99:25:18:667:7:263:-10,0,-10 0/0:68.1483:4:4:142:0:0:0,-1.20412,-10 0/0:99:33:33:1194:0:0:0,-9.93399,-10 0/0:99:16:16:557:0:0:0,-4.81648,-10 0/0:86.21:10:10:355:0:0:0,-3.0103,-10 0/0:83.1997:9:9:323:0:0:0,-2.70927,-10 0/0:99:18:18:650:0:0:0,-5.41854,-10 0/0:99:15:15:538:0:0:0,-4.51545,-10 scaffold_202 1246876 . C T 509.672 . AB=0.647059;ABP=9.39698;AC=2;AF=0.0108696;AN=184;AO=22;CIGAR=1X;DP=1365;DPB=1365;DPRA=1.14951;EPP=3.0103;EPPR=3.20594;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9873;NS=92;NUMALT=1;ODDS=4.21589;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=810;QR=49236;RO=1343;RPP=50.7827;RPPR=2816;RUN=1;SAF=11;SAP=3.0103;SAR=11;SRF=665;SRP=3.28355;SRR=678;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.4308:14:14:470:0:0:0,-4.21442,-10 0/0:31.3381:5:5:179:0:0:0,-1.50515,-10 0/0:64.4514:16:16:570:0:0:0,-4.81648,-10 0/0:37.3587:7:7:255:0:0:0,-2.10721,-10 0/0:28.3278:4:4:152:0:0:0,-1.20412,-10 0/0:43.3793:9:9:335:0:0:0,-2.70927,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:70.472:18:18:635:0:0:0,-5.41854,-10 0/0:40.369:8:8:298:0:0:0,-2.40824,-10 0/0:19.2969:1:1:35:0:0:0,-0.30103,-3.5 0/0:28.3278:4:4:149:0:0:0,-1.20412,-10 0/0:34.3484:6:6:228:0:0:0,-1.80618,-10 0/0:73.4823:19:19:698:0:0:0,-5.71957,-10 0/0:70.472:18:18:656:0:0:0,-5.41854,-10 0/0:82.5132:22:22:818:0:0:0,-6.62266,-10 0/0:46.3896:10:10:369:0:0:0,-3.0103,-10 0/0:76.4926:20:20:749:0:0:0,-6.0206,-10 0/0:34.3484:6:6:223:0:0:0,-1.80618,-10 0/0:58.4308:14:14:532:0:0:0,-4.21442,-10 0/0:67.4617:17:17:621:0:0:0,-5.11751,-10 0/0:52.4102:12:12:442:0:0:0,-3.61236,-10 0/0:79.5029:21:21:786:0:0:0,-6.32163,-10 0/0:28.3278:4:4:152:0:0:0,-1.20412,-10 0/0:85.5234:23:23:833:0:0:0,-6.92369,-10 0/0:55.4205:13:13:493:0:0:0,-3.91339,-10 0/0:58.4308:14:14:507:0:0:0,-4.21442,-10 0/0:55.4205:13:13:446:0:0:0,-3.91339,-10 0/0:46.3896:10:10:342:0:0:0,-3.0103,-10 0/0:67.4617:17:17:618:0:0:0,-5.11751,-10 0/0:99:45:45:1635:0:0:0,-10,-10 0/0:31.3381:5:5:189:0:0:0,-1.50515,-10 0/0:28.3278:4:4:145:0:0:0,-1.20412,-10 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:28.3278:4:4:152:0:0:0,-1.20412,-10 0/0:70.472:18:18:684:0:0:0,-5.41854,-10 0/0:28.3278:4:4:149:0:0:0,-1.20412,-10 0/0:49.3999:11:11:413:0:0:0,-3.31133,-10 0/0:70.472:18:18:673:0:0:0,-5.41854,-10 0/0:49.3999:11:11:401:0:0:0,-3.31133,-10 0/0:79.5029:21:21:763:0:0:0,-6.32163,-10 0/0:99:28:28:1049:0:0:0,-8.42884,-10 0/0:58.4308:14:14:509:0:0:0,-4.21442,-10 0/0:61.4411:15:15:570:0:0:0,-4.51545,-10 0/0:88.5336:24:24:887:0:0:0,-7.22472,-10 0/0:82.5132:22:22:813:0:0:0,-6.62266,-10 0/0:73.4823:19:19:688:0:0:0,-5.71957,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:67.4617:17:17:601:0:0:0,-5.11751,-10 0/0:46.3896:10:10:371:0:0:0,-3.0103,-10 0/0:99:32:32:1194:0:0:0,-9.63296,-10 0/0:55.4205:13:13:476:0:0:0,-3.91339,-10 0/0:55.4205:13:13:472:0:0:0,-3.91339,-10 0/0:58.4308:14:14:506:0:0:0,-4.21442,-10 0/0:37.3587:7:7:250:0:0:0,-2.10721,-10 0/0:58.4308:14:14:520:0:0:0,-4.21442,-10 0/0:46.3896:10:10:366:0:0:0,-3.0103,-10 0/0:67.4617:17:17:594:0:0:0,-5.11751,-10 0/0:49.3999:11:11:358:0:0:0,-3.31133,-10 0/0:76.4926:20:20:703:0:0:0,-6.0206,-10 0/0:43.3793:9:9:341:0:0:0,-2.70927,-10 0/0:73.4823:19:19:704:0:0:0,-5.71957,-10 0/0:43.3793:9:9:342:0:0:0,-2.70927,-10 0/0:91.5437:25:25:913:0:0:0,-7.52575,-10 0/0:55.4205:13:13:494:0:0:0,-3.91339,-10 0/0:40.369:8:8:304:0:0:0,-2.40824,-10 0/0:82.5132:22:22:803:0:0:0,-6.62266,-10 0/0:73.4823:19:19:702:0:0:0,-5.71957,-10 0/0:40.369:8:8:304:0:0:0,-2.40824,-10 0/0:99:30:30:1117:0:0:0,-9.0309,-10 0/0:43.3793:9:9:340:0:0:0,-2.70927,-10 0/1:0.0613855:16:0:0:16:585:-10,-4.81648,0 0/0:99:36:36:1324:0:0:0,-10,-10 0/1:99:18:12:456:6:225:-10,0,-10 0/0:61.4411:15:15:570:0:0:0,-4.51545,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:49.3999:11:11:376:0:0:0,-3.31133,-10 0/0:31.3381:5:5:190:0:0:0,-1.50515,-10 0/0:55.4205:13:13:438:0:0:0,-3.91339,-10 0/0:31.3381:5:5:190:0:0:0,-1.50515,-10 0/0:31.3381:5:5:166:0:0:0,-1.50515,-10 0/0:88.5336:24:24:904:0:0:0,-7.22472,-10 0/0:76.4926:20:20:708:0:0:0,-6.0206,-10 0/0:76.4926:20:20:718:0:0:0,-6.0206,-10 0/0:76.4926:20:20:758:0:0:0,-6.0206,-10 0/0:64.4514:16:16:561:0:0:0,-4.81648,-10 0/0:25.3175:3:3:114:0:0:0,-0.90309,-10 0/0:49.3999:11:11:396:0:0:0,-3.31133,-10 0/0:37.3587:7:7:266:0:0:0,-2.10721,-10 0/0:22.3072:2:2:76:0:0:0,-0.60206,-7.22 0/0:49.3999:11:11:394:0:0:0,-3.31133,-10 0/0:49.3999:11:11:413:0:0:0,-3.31133,-10 0/0:64.4514:16:16:597:0:0:0,-4.81648,-10 scaffold_202 1246877 . G A 1677.65 . AB=0.714286;ABP=22.5536;AC=8;AF=0.0434782;AN=184;AO=35;CIGAR=1X2M1X;DP=1365;DPB=1365;DPRA=1.10467;EPP=3.56868;EPPR=3.29589;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9868;NS=92;NUMALT=2;ODDS=3.53826;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1230;QR=46157;RO=1285;RPP=79.0118;RPPR=2698.63;RUN=1;SAF=16;SAP=3.56868;SAR=19;SRF=638;SRP=3.14718;SRR=647;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:54.6654:14:14:480:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:27.5727:5:5:182:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:60.686:16:16:546:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:33.5933:7:7:238:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|0:24.5624:4:4:139:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:39.6139:9:9:327:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:99:31:31:1106:0,0:0,0:0,-9.33193,-10,-9.33193,-10,-10 0|0:66.7066:18:18:628:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:36.6036:8:8:285:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:15.5315:1:1:36:0,0:0,0:0,-0.30103,-3.6,-0.30103,-3.6,-3.6 0|0:24.5624:4:4:151:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:30.583:6:6:224:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|0:69.7169:19:19:682:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|1:99:18:8:272:10,0:378,0:-10,0,-10,-10,-10,-10 0|0:78.7478:22:22:807:0,0:0,0:0,-6.62266,-10,-6.62266,-10,-10 0|0:42.6242:10:10:367:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:72.7272:20:20:725:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:30.583:6:6:221:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|0:54.6654:14:14:518:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:63.6963:17:17:622:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:45.6345:12:11:369:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:75.7375:21:21:752:0,0:0,0:0,-6.32163,-10,-6.32163,-10,-10 0|0:24.5624:4:4:149:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:81.758:23:23:831:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:51.6551:13:13:444:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|1:38.0764:14:11:410:3,0:114,0:-8.98668,0,-10,-10,-10,-10 0|0:51.6551:13:13:441:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:42.6242:10:10:355:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:63.6963:17:17:599:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:99:45:44:1597:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:27.5727:5:5:186:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:24.5624:4:4:147:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:93.7975:29:27:965:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:24.5624:4:4:144:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:66.7066:18:18:670:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:24.5624:4:4:151:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:45.6345:11:11:392:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:66.7066:18:18:650:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:45.6345:11:11:392:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|1:99:21:9:314:0,12:0,424:-10,-10,-10,0,-10,-10 0|0:96.8106:28:28:1019:0,0:0,0:0,-8.42884,-10,-8.42884,-10,-10 0|0:54.6654:14:14:516:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:57.6757:15:15:561:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:84.7682:24:24:857:0,0:0,0:0,-7.22472,-10,-7.22472,-10,-10 0|1:99:22:10:349:11,0:403,0:-10,0,-10,-10,-10,-10 0|0:69.7169:19:19:666:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:99:34:34:1260:0,0:0,0:0,-10,-10,-10,-10,-10 0|1:99:17:5:180:0,12:0,408:-10,-10,-10,0,-10,-10 0|0:42.6242:10:10:351:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:99:32:31:1123:0,0:0,0:0,-9.33193,-10,-9.33193,-10,-10 0|0:51.6551:13:13:457:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|1:89.0118:13:8:282:5,0:166,0:-10,0,-10,-10,-10,-10 0|0:54.6654:14:14:506:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:33.5933:7:7:237:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|0:54.6654:14:14:496:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:42.6242:10:10:364:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:63.6963:17:17:585:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:45.6345:11:11:355:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:72.7272:20:20:705:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:39.6139:9:9:319:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:69.7169:19:19:704:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:39.6139:9:9:339:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:87.7789:25:25:873:0,0:0,0:0,-7.52575,-10,-7.52575,-10,-10 0|0:51.6551:13:13:485:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:36.6036:8:8:295:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:78.7478:22:22:799:0,0:0,0:0,-6.62266,-10,-6.62266,-10,-10 0|0:69.7169:19:19:676:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:36.6036:8:8:293:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:99:30:30:1086:0,0:0,0:0,-9.0309,-10,-9.0309,-10,-10 0|0:36.6036:9:8:275:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:60.686:16:16:574:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:99:36:36:1310:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:66.7066:18:18:651:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:57.6757:15:15:559:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:99:29:29:1053:0,0:0,0:0,-8.72987,-10,-8.72987,-10,-10 0|0:42.6242:11:10:347:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:27.5727:5:5:189:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:51.6551:13:13:465:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:27.5727:5:5:186:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:27.5727:5:5:174:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:81.758:24:23:834:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:72.7272:20:20:707:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:72.7272:20:20:721:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:72.7272:20:20:735:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:60.686:16:16:576:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:21.5521:3:3:111:0,0:0,0:0,-0.90309,-10,-0.90309,-10,-10 0|1:7.85122e-05:11:0:0:0,11:0,398:-10,-10,-10,-3.31133,-3.31133,0 0|1:9.59603e-06:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:18.5418:2:2:73:0,0:0,0:0,-0.60206,-6.935,-0.60206,-6.935,-6.935 0|0:45.6345:11:11:407:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:45.6345:11:11:399:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:60.686:16:16:559:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 scaffold_202 1246880 . G A 1677.65 . AB=0.714286;ABP=22.5536;AC=3;AF=0.0163043;AN=184;AO=35;CIGAR=1X2M1X;DP=1365;DPB=1365;DPRA=1.10467;EPP=3.56868;EPPR=3.29589;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9868;NS=92;NUMALT=2;ODDS=3.53826;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1230;QR=46157;RO=1285;RPP=79.0118;RPPR=2698.63;RUN=1;SAF=16;SAP=3.56868;SAR=19;SRF=638;SRP=3.14718;SRR=647;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:54.6654:14:14:480:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:27.5727:5:5:182:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:60.686:16:16:546:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:33.5933:7:7:238:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|0:24.5624:4:4:139:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:39.6139:9:9:327:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:99:31:31:1106:0,0:0,0:0,-9.33193,-10,-9.33193,-10,-10 0|0:66.7066:18:18:628:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:36.6036:8:8:285:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:15.5315:1:1:36:0,0:0,0:0,-0.30103,-3.6,-0.30103,-3.6,-3.6 0|0:24.5624:4:4:151:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:30.583:6:6:224:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|0:69.7169:19:19:682:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:99:18:8:272:10,0:378,0:-10,0,-10,-10,-10,-10 0|0:78.7478:22:22:807:0,0:0,0:0,-6.62266,-10,-6.62266,-10,-10 0|0:42.6242:10:10:367:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:72.7272:20:20:725:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:30.583:6:6:221:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|0:54.6654:14:14:518:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:63.6963:17:17:622:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:45.6345:12:11:369:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:75.7375:21:21:752:0,0:0,0:0,-6.32163,-10,-6.32163,-10,-10 0|0:24.5624:4:4:149:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:81.758:23:23:831:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:51.6551:13:13:444:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:38.0764:14:11:410:3,0:114,0:-8.98668,0,-10,-10,-10,-10 0|0:51.6551:13:13:441:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:42.6242:10:10:355:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:63.6963:17:17:599:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:99:45:44:1597:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:27.5727:5:5:186:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:24.5624:4:4:147:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:93.7975:29:27:965:0,0:0,0:0,-8.12781,-10,-8.12781,-10,-10 0|0:24.5624:4:4:144:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:66.7066:18:18:670:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:24.5624:4:4:151:0,0:0,0:0,-1.20412,-10,-1.20412,-10,-10 0|0:45.6345:11:11:392:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:66.7066:18:18:650:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:45.6345:11:11:392:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|1:99:21:9:314:0,12:0,424:-10,-10,-10,0,-10,-10 0|0:96.8106:28:28:1019:0,0:0,0:0,-8.42884,-10,-8.42884,-10,-10 0|0:54.6654:14:14:516:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:57.6757:15:15:561:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:84.7682:24:24:857:0,0:0,0:0,-7.22472,-10,-7.22472,-10,-10 0|0:99:22:10:349:11,0:403,0:-10,0,-10,-10,-10,-10 0|0:69.7169:19:19:666:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:99:34:34:1260:0,0:0,0:0,-10,-10,-10,-10,-10 0|1:99:17:5:180:0,12:0,408:-10,-10,-10,0,-10,-10 0|0:42.6242:10:10:351:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:99:32:31:1123:0,0:0,0:0,-9.33193,-10,-9.33193,-10,-10 0|0:51.6551:13:13:457:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:89.0118:13:8:282:5,0:166,0:-10,0,-10,-10,-10,-10 0|0:54.6654:14:14:506:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:33.5933:7:7:237:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|0:54.6654:14:14:496:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:42.6242:10:10:364:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:63.6963:17:17:585:0,0:0,0:0,-5.11751,-10,-5.11751,-10,-10 0|0:45.6345:11:11:355:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:72.7272:20:20:705:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:39.6139:9:9:319:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:69.7169:19:19:704:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:39.6139:9:9:339:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:87.7789:25:25:873:0,0:0,0:0,-7.52575,-10,-7.52575,-10,-10 0|0:51.6551:13:13:485:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:36.6036:8:8:295:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:78.7478:22:22:799:0,0:0,0:0,-6.62266,-10,-6.62266,-10,-10 0|0:69.7169:19:19:676:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:36.6036:8:8:293:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:99:30:30:1086:0,0:0,0:0,-9.0309,-10,-9.0309,-10,-10 0|0:36.6036:9:8:275:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|0:60.686:16:16:574:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:99:36:36:1310:0,0:0,0:0,-10,-10,-10,-10,-10 0|0:66.7066:18:18:651:0,0:0,0:0,-5.41854,-10,-5.41854,-10,-10 0|0:57.6757:15:15:559:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:99:29:29:1053:0,0:0,0:0,-8.72987,-10,-8.72987,-10,-10 0|0:42.6242:11:10:347:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:27.5727:5:5:189:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:51.6551:13:13:465:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:27.5727:5:5:186:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:27.5727:5:5:174:0,0:0,0:0,-1.50515,-10,-1.50515,-10,-10 0|0:81.758:24:23:834:0,0:0,0:0,-6.92369,-10,-6.92369,-10,-10 0|0:72.7272:20:20:707:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:72.7272:20:20:721:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:72.7272:20:20:735:0,0:0,0:0,-6.0206,-10,-6.0206,-10,-10 0|0:60.686:16:16:576:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:21.5521:3:3:111:0,0:0,0:0,-0.90309,-10,-0.90309,-10,-10 0|1:7.85122e-05:11:0:0:0,11:0,398:-10,-10,-10,-3.31133,-3.31133,0 0|0:9.59603e-06:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:18.5418:2:2:73:0,0:0,0:0,-0.60206,-6.935,-0.60206,-6.935,-6.935 0|0:45.6345:11:11:407:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:45.6345:11:11:399:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:60.686:16:16:559:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 scaffold_202 1407848 . G C 746.257 . AB=0.428571;ABP=6.1124;AC=2;AF=0.0108696;AN=184;AO=30;CIGAR=1X;DP=2170;DPB=2170;DPRA=1.5;EPP=21.5402;EPPR=9.35792;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9981;NS=92;NUMALT=1;ODDS=6.8992;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1099;QR=77062;RO=2135;RPP=68.1545;RPPR=4639.1;RUN=1;SAF=7;SAP=21.5402;SAR=23;SRF=1028;SRP=9.35792;SRR=1107;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:81.1555:20:20:746:0:0:0,-6.0206,-10 0/0:60.0835:13:13:459:0:0:0,-3.91339,-10 0/0:66.1041:15:15:484:0:0:0,-4.51545,-10 0/0:90.1856:23:23:828:0:0:0,-6.92369,-10 0/0:81.1555:20:20:729:0:0:0,-6.0206,-10 0/0:63.0938:14:14:495:0:0:0,-4.21442,-10 0/0:99:52:52:1881:0:0:0,-10,-10 0/0:99:29:29:1061:0:0:0,-8.72987,-10 0/0:99:26:26:933:0:0:0,-7.82678,-10 0/0:60.0835:13:13:443:0:0:0,-3.91339,-10 0/0:42.0217:7:7:260:0:0:0,-2.10721,-10 0/0:48.0423:9:9:311:0:0:0,-2.70927,-10 0/0:99:43:42:1526:0:0:0,-10,-10 0/0:99:28:28:924:0:0:0,-8.42884,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:99:27:27:952:0:0:0,-8.12781,-10 0/0:99:29:28:1025:0:0:0,-8.42884,-10 0/0:69.1144:16:16:578:0:0:0,-4.81648,-10 0/0:99:30:30:1069:0:0:0,-9.0309,-10 0/0:99:41:41:1410:0:0:0,-10,-10 0/0:48.0423:9:9:327:0:0:0,-2.70927,-10 0/0:99:38:37:1332:0:0:0,-10,-10 0/0:48.0423:9:9:315:0:0:0,-2.70927,-10 0/0:99:27:27:1001:0:0:0,-8.12781,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:99:29:29:1025:0:0:0,-8.72987,-10 0/0:66.1041:15:15:531:0:0:0,-4.51545,-10 0/0:60.0835:13:13:488:0:0:0,-3.91339,-10 0/0:72.1247:17:17:604:0:0:0,-5.11751,-10 0/0:99:42:42:1557:0:0:0,-10,-10 0/0:48.0423:9:9:335:0:0:0,-2.70927,-10 0/0:36.0011:5:5:190:0:0:0,-1.50515,-10 0/0:84.1659:21:21:740:0:0:0,-6.32163,-10 0/0:72.1247:17:17:599:0:0:0,-5.11751,-10 0/0:81.1555:20:20:713:0:0:0,-6.0206,-10 0/0:32.9908:4:4:152:0:0:0,-1.20412,-10 0/0:29.9805:3:3:82:0:0:0,-0.90309,-7.65333 0/0:99:27:27:969:0:0:0,-8.12781,-10 0/0:96.2035:25:25:926:0:0:0,-7.52575,-10 0/0:72.1247:17:17:620:0:0:0,-5.11751,-10 0/0:99:57:57:2038:0:0:0,-10,-10 0/0:69.1144:16:16:570:0:0:0,-4.81648,-10 0/0:84.1659:21:21:727:0:0:0,-6.32163,-10 0/0:99:44:44:1572:0:0:0,-10,-10 0/0:90.1856:23:23:843:0:0:0,-6.92369,-10 0/0:99:33:33:1219:0:0:0,-9.93399,-10 0/0:99:47:47:1694:0:0:0,-10,-10 0/0:99:35:35:1296:0:0:0,-10,-10 0/0:69.1144:16:16:604:0:0:0,-4.81648,-10 0/0:99:40:40:1444:0:0:0,-10,-10 0/0:66.1041:15:15:565:0:0:0,-4.51545,-10 0/0:99:41:41:1513:0:0:0,-10,-10 0/0:54.0629:11:11:387:0:0:0,-3.31133,-10 0/0:36.0011:5:5:186:0:0:0,-1.50515,-10 0/0:99:61:61:2161:0:0:0,-10,-10 0/0:66.1041:15:15:534:0:0:0,-4.51545,-10 0/0:87.1757:22:22:788:0:0:0,-6.62266,-10 0/0:36.0011:5:5:179:0:0:0,-1.50515,-10 0/0:93.195:24:24:811:0:0:0,-7.22472,-10 0/0:66.1041:15:15:531:0:0:0,-4.51545,-10 0/1:99:40:21:747:19:706:-10,0,-10 0/0:75.135:18:18:675:0:0:0,-5.41854,-10 0/0:99:49:49:1752:0:0:0,-10,-10 0/1:99:30:19:706:11:393:-10,0,-10 0/0:96.2035:25:25:920:0:0:0,-7.52575,-10 0/0:99:41:41:1481:0:0:0,-10,-10 0/0:66.1041:15:15:536:0:0:0,-4.51545,-10 0/0:32.9908:4:4:150:0:0:0,-1.20412,-10 0/0:99:52:52:1889:0:0:0,-10,-10 0/0:69.1144:16:16:595:0:0:0,-4.81648,-10 0/0:72.1247:17:17:614:0:0:0,-5.11751,-10 0/0:99:35:35:1296:0:0:0,-10,-10 0/0:93.195:24:24:907:0:0:0,-7.22472,-10 0/0:75.135:18:18:656:0:0:0,-5.41854,-10 0/0:99:36:36:1244:0:0:0,-10,-10 0/0:54.0629:11:11:405:0:0:0,-3.31133,-10 0/0:81.1555:20:20:742:0:0:0,-6.0206,-10 0/0:51.0526:10:10:343:0:0:0,-3.0103,-10 0/0:48.0423:9:9:338:0:0:0,-2.70927,-10 0/0:69.1144:16:16:588:0:0:0,-4.81648,-10 0/0:99:35:35:1302:0:0:0,-10,-10 0/0:99:28:26:973:0:0:0,-7.82678,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:99:26:26:944:0:0:0,-7.82678,-10 0/0:93.195:24:24:834:0:0:0,-7.22472,-10 0/0:29.9805:3:3:112:0:0:0,-0.90309,-10 0/0:96.2035:25:25:943:0:0:0,-7.52575,-10 0/0:87.1757:22:22:748:0:0:0,-6.62266,-10 0/0:39.0114:6:6:217:0:0:0,-1.80618,-10 0/0:90.1856:23:23:857:0:0:0,-6.92369,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:81.1555:20:20:714:0:0:0,-6.0206,-10 scaffold_202 1449511 . G A 6515.82 . AB=0.46988;ABP=4.97247;AC=33;AF=0.179348;AN=184;AO=244;CIGAR=1X;DP=1262;DPB=1262;DPRA=1.22598;EPP=3.15269;EPPR=3.0103;GTI=4;LEN=1;MEANALT=1;MQM=59.9959;MQMR=59.9499;NS=92;NUMALT=1;ODDS=0.478558;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8852;QR=37030;RO=1018;RPP=524.199;RPPR=2093.64;RUN=1;SAF=125;SAP=3.33068;SAR=119;SRF=523;SRP=4.68263;SRR=495;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.093:14:14:528:0:0:0,-4.21442,-10 0/0:31.0312:8:8:281:0:0:0,-2.40824,-10 0/0:49.093:14:14:475:0:0:0,-4.21442,-10 0/0:49.093:14:14:518:0:0:0,-4.21442,-10 0/0:28.0209:7:7:260:0:0:0,-2.10721,-10 0/0:37.0518:10:10:360:0:0:0,-3.0103,-10 0/0:82.2063:25:25:920:0:0:0,-7.52575,-10 1/1:27.9595:14:0:0:14:528:-10,-4.21442,0 0/1:0.665223:6:0:0:6:224:-10,-1.80618,0 0/1:0.0193173:1:0:0:1:29:-2.9,-0.30103,0 0/0:18.99:4:4:151:0:0:0,-1.20412,-10 0/1:0.0777901:3:0:0:3:114:-10,-0.90309,0 0/1:99:16:9:337:7:251:-10,0,-10 0/0:61.1342:18:18:670:0:0:0,-5.41854,-10 1/1:67.0934:27:0:0:27:1024:-10,-8.12781,0 0/0:52.1033:15:15:521:0:0:0,-4.51545,-10 0/0:43.0724:12:12:449:0:0:0,-3.61236,-10 0/0:18.99:4:4:143:0:0:0,-1.20412,-10 0/0:55.1136:16:16:590:0:0:0,-4.81648,-10 0/0:97.2588:30:30:980:0:0:0,-9.0309,-10 0/0:37.0518:10:10:362:0:0:0,-3.0103,-10 0/0:79.196:24:24:880:0:0:0,-7.22472,-10 0/0:15.9797:3:3:111:0:0:0,-0.90309,-10 0/0:64.1445:19:19:720:0:0:0,-5.71957,-10 0/0:49.093:14:14:473:0:0:0,-4.21442,-10 0/1:99:22:13:469:9:294:-10,0,-10 0/0:43.0724:12:12:442:0:0:0,-3.61236,-10 0/0:37.0518:10:10:373:0:0:0,-3.0103,-10 1/1:21.9389:12:0:0:12:447:-10,-3.61236,0 0/0:56.1844:25:24:830:1:15:0,-4.62781,-10 0/1:0.0387209:2:0:0:2:52:-4.94,-0.60206,0 0/0:20.2381:12:11:395:1:15:0,-1.03318,-10 0/0:37.0518:10:10:371:0:0:0,-3.0103,-10 1/1:6.88735:7:0:0:7:266:-10,-2.10721,0 0/0:40.0621:11:11:415:0:0:0,-3.31133,-10 0/0:22.0003:5:5:182:0:0:0,-1.50515,-10 0/0:40.0621:11:11:416:0:0:0,-3.31133,-10 0/0:58.1239:17:17:636:0:0:0,-5.11751,-10 0/0:34.0415:9:9:328:0:0:0,-2.70927,-10 0/0:34.0415:9:9:318:0:0:0,-2.70927,-10 0/0:61.1342:18:18:660:0:0:0,-5.41854,-10 0/0:55.1136:16:16:603:0:0:0,-4.81648,-10 0/0:52.1033:15:15:545:0:0:0,-4.51545,-10 0/1:99:32:15:529:17:580:-10,0,-10 0/1:99:20:9:318:11:395:-10,0,-10 0/0:37.0518:10:10:364:0:0:0,-3.0103,-10 0/0:91.2368:28:28:1034:0:0:0,-8.42884,-10 0/0:61.1342:18:18:659:0:0:0,-5.41854,-10 0/0:37.0518:10:10:380:0:0:0,-3.0103,-10 0/0:94.2467:29:29:1046:0:0:0,-8.72987,-10 0/0:18.99:4:4:150:0:0:0,-1.20412,-10 0/0:88.2267:27:27:1013:0:0:0,-8.12781,-10 0/0:37.0518:10:10:357:0:0:0,-3.0103,-10 0/0:15.9797:3:3:113:0:0:0,-0.90309,-10 0/0:85.2165:26:26:963:0:0:0,-7.82678,-10 0/0:49.093:14:14:519:0:0:0,-4.21442,-10 0/0:55.1136:16:16:607:0:0:0,-4.81648,-10 0/0:25.0106:6:6:226:0:0:0,-1.80618,-10 1/1:24.9492:13:0:0:13:470:-10,-3.91339,0 0/0:25.0106:6:6:215:0:0:0,-1.80618,-10 0/0:58.1239:17:17:613:0:0:0,-5.11751,-10 1/1:30.9698:15:0:0:15:559:-10,-4.51545,0 0/1:99:31:24:867:7:238:-10,0,-10 0/0:52.1033:15:15:552:0:0:0,-4.51545,-10 0/0:43.0724:12:12:450:0:0:0,-3.61236,-10 1/1:30.9698:15:0:0:15:534:-10,-4.51545,0 0/1:16.3545:11:10:358:1:38:-1.53006,0,-10 0/0:46.0827:13:13:477:0:0:0,-3.91339,-10 0/1:99:27:14:497:13:493:-10,0,-10 0/0:34.0415:9:9:338:0:0:0,-2.70927,-10 0/0:67.1548:20:20:722:0:0:0,-6.0206,-10 0/0:61.1342:18:18:651:0:0:0,-5.41854,-10 0/0:52.1033:15:15:503:0:0:0,-4.51545,-10 0/0:25.0106:6:6:207:0:0:0,-1.80618,-10 0/0:52.1033:15:15:554:0:0:0,-4.51545,-10 0/0:28.0209:7:7:266:0:0:0,-2.10721,-10 0/0:34.0415:9:9:331:0:0:0,-2.70927,-10 1/1:9.89765:8:0:0:8:304:-10,-2.40824,0 0/0:22.0003:5:5:183:0:0:0,-1.50515,-10 0/0:18.99:4:4:149:0:0:0,-1.20412,-10 0/1:99:23:11:417:12:443:-10,0,-10 0/1:99:21:10:380:11:417:-10,0,-10 0/1:99:20:9:337:11:412:-10,0,-10 0/0:58.1239:17:17:587:0:0:0,-5.11751,-10 0/0:49.093:14:14:483:0:0:0,-4.21442,-10 0/0:25.0106:6:6:223:0:0:0,-1.80618,-10 0/0:40.0621:11:11:392:0:0:0,-3.31133,-10 0/0:43.0724:12:12:423:0:0:0,-3.61236,-10 0/0:22.0003:5:5:188:0:0:0,-1.50515,-10 0/1:99:14:8:297:6:227:-10,0,-10 0/0:37.0518:10:10:380:0:0:0,-3.0103,-10 1/1:27.9595:14:0:0:14:483:-10,-4.21442,0 scaffold_202 1479671 . G A 190.761 . AB=0.615385;ABP=4.51363;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1614;DPB=1614;DPRA=0.738913;EPP=3.0103;EPPR=4.22719;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9757;NS=92;NUMALT=1;ODDS=11.9355;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=304;QR=58890;RO=1606;RPP=12.7819;RPPR=3386.94;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=800;SRP=3.05898;SRR=806;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:26:26:930:0:0:0,-7.82678,-10 0/0:72.9077:11:11:415:0:0:0,-3.31133,-10 0/0:93.9777:18:18:646:0:0:0,-5.41854,-10 0/0:84.9486:15:15:568:0:0:0,-4.51545,-10 0/1:99:13:5:189:8:304:-10,0,-10 0/0:57.8562:6:6:228:0:0:0,-1.80618,-10 0/0:99:39:39:1454:0:0:0,-10,-10 0/0:99:23:23:858:0:0:0,-6.92369,-10 0/0:63.8768:8:8:274:0:0:0,-2.40824,-10 0/0:51.8356:4:4:148:0:0:0,-1.20412,-10 0/0:66.8871:9:9:339:0:0:0,-2.70927,-10 0/0:57.8562:6:6:228:0:0:0,-1.80618,-10 0/0:99:32:32:1200:0:0:0,-9.63296,-10 0/0:99:34:34:1194:0:0:0,-10,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/0:99:25:25:943:0:0:0,-7.52575,-10 0/0:87.9587:16:16:602:0:0:0,-4.81648,-10 0/0:72.9077:11:11:392:0:0:0,-3.31133,-10 0/0:87.9587:16:16:572:0:0:0,-4.81648,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:87.9587:16:16:575:0:0:0,-4.81648,-10 0/0:99:23:23:870:0:0:0,-6.92369,-10 0/0:69.8974:10:10:378:0:0:0,-3.0103,-10 0/0:81.9385:14:14:523:0:0:0,-4.21442,-10 0/0:72.9077:11:11:418:0:0:0,-3.31133,-10 0/0:99:23:23:740:0:0:0,-6.92369,-10 0/0:93.9777:18:18:680:0:0:0,-5.41854,-10 0/0:75.9179:12:12:429:0:0:0,-3.61236,-10 0/0:84.9486:15:15:522:0:0:0,-4.51545,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:54.8459:5:5:190:0:0:0,-1.50515,-10 0/0:60.8665:7:7:242:0:0:0,-2.10721,-10 0/0:87.9587:16:16:588:0:0:0,-4.81648,-10 0/0:51.8356:4:4:152:0:0:0,-1.20412,-10 0/0:90.9684:17:17:605:0:0:0,-5.11751,-10 0/0:57.8562:6:6:228:0:0:0,-1.80618,-10 0/0:75.9179:12:12:451:0:0:0,-3.61236,-10 0/0:99:32:32:1186:0:0:0,-9.63296,-10 0/0:81.9385:14:14:516:0:0:0,-4.21442,-10 0/0:93.9777:18:18:674:0:0:0,-5.41854,-10 0/0:99:22:22:800:0:0:0,-6.62266,-10 0/0:75.9179:12:12:450:0:0:0,-3.61236,-10 0/0:69.8974:10:10:376:0:0:0,-3.0103,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:93.9777:18:18:646:0:0:0,-5.41854,-10 0/0:78.9282:13:13:481:0:0:0,-3.91339,-10 0/0:99:46:46:1710:0:0:0,-10,-10 0/0:87.9587:16:16:581:0:0:0,-4.81648,-10 0/0:84.9486:15:15:558:0:0:0,-4.51545,-10 0/0:99:44:44:1599:0:0:0,-10,-10 0/0:57.8562:6:6:224:0:0:0,-1.80618,-10 0/0:99:28:28:1002:0:0:0,-8.42884,-10 0/0:72.9077:11:11:408:0:0:0,-3.31133,-10 0/0:51.8356:4:4:130:0:0:0,-1.20412,-10 0/0:99:42:42:1548:0:0:0,-10,-10 0/0:72.9077:11:11:416:0:0:0,-3.31133,-10 0/0:87.9587:16:16:579:0:0:0,-4.81648,-10 0/0:69.8974:10:10:380:0:0:0,-3.0103,-10 0/0:84.9486:15:15:561:0:0:0,-4.51545,-10 0/0:75.9179:12:12:446:0:0:0,-3.61236,-10 0/0:99:31:31:1163:0:0:0,-9.33193,-10 0/0:75.9179:12:12:446:0:0:0,-3.61236,-10 0/0:99:31:31:1171:0:0:0,-9.33193,-10 0/0:99:25:25:869:0:0:0,-7.52575,-10 0/0:78.9282:13:13:482:0:0:0,-3.91339,-10 0/0:99:29:29:1073:0:0:0,-8.72987,-10 0/0:72.9077:11:11:395:0:0:0,-3.31133,-10 0/0:75.9179:12:12:453:0:0:0,-3.61236,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:75.9179:12:12:456:0:0:0,-3.61236,-10 0/0:90.9684:17:17:632:0:0:0,-5.11751,-10 0/0:99:26:26:938:0:0:0,-7.82678,-10 0/0:69.8974:10:10:328:0:0:0,-3.0103,-10 0/0:99:25:25:905:0:0:0,-7.52575,-10 0/0:87.9587:16:16:537:0:0:0,-4.81648,-10 0/0:78.9282:13:13:491:0:0:0,-3.91339,-10 0/0:84.9486:15:15:570:0:0:0,-4.51545,-10 0/0:84.9486:15:15:512:0:0:0,-4.51545,-10 0/0:69.8974:10:10:345:0:0:0,-3.0103,-10 0/0:60.8665:7:7:265:0:0:0,-2.10721,-10 0/0:99:23:23:826:0:0:0,-6.92369,-10 0/0:87.9587:16:16:561:0:0:0,-4.81648,-10 0/0:87.9587:16:16:592:0:0:0,-4.81648,-10 0/0:99:25:25:942:0:0:0,-7.52575,-10 0/0:96.9859:19:19:695:0:0:0,-5.71957,-10 0/0:57.8562:6:6:225:0:0:0,-1.80618,-10 0/0:99:21:21:797:0:0:0,-6.32163,-10 0/0:87.9587:16:16:563:0:0:0,-4.81648,-10 0/0:54.8459:5:5:187:0:0:0,-1.50515,-10 0/0:87.9587:16:16:588:0:0:0,-4.81648,-10 0/0:84.9486:15:15:570:0:0:0,-4.51545,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 scaffold_202 1483321 . A G 26431 . AB=0.548387;ABP=9.945;AC=60;AF=0.322581;AN=186;AO=934;CIGAR=1X;DP=2654;DPB=2654;DPRA=1.15562;EPP=5.39101;EPPR=3.33425;GTI=3;LEN=1;MEANALT=1.05556;MQM=59.9743;MQMR=59.9994;NS=93;NUMALT=1;ODDS=0.530067;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=33757;QR=62620;RO=1716;RPP=2031.17;RPPR=3729.26;RUN=1;SAF=451;SAP=5.39101;SAR=483;SRF=866;SRP=3.33425;SRR=850;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:20.2914:25:24:885:1:37:0,-2.42781,-10 0/0:65.2532:24:24:792:0:0:0,-7.22472,-10 0/0:98.3544:35:35:1286:0:0:0,-10,-10 0/0:92.3428:33:33:1192:0:0:0,-9.93399,-10 0/0:35.1502:14:14:500:0:0:0,-4.21442,-10 0/0:44.1811:17:17:618:0:0:0,-5.11751,-10 0/0:99:62:62:2269:0:0:0,-10,-10 0/0:63.5044:39:38:1354:1:34:0,-6.74911,-10 0/0:59.2326:22:22:808:0:0:0,-6.62266,-10 0/1:1.22523:5:5:144:0:0:0,-1.50515,-10 0/0:17.0884:8:8:298:0:0:0,-2.40824,-10 0/0:23.109:10:10:379:0:0:0,-3.0103,-10 0/0:99:43:43:1555:0:0:0,-10,-10 0/1:99:47:18:640:29:1002:-10,0,-10 0/0:99:40:40:1453:0:0:0,-10,-10 0/0:99:36:36:1349:0:0:0,-10,-10 0/0:92.3428:33:33:1181:0:0:0,-9.93399,-10 0/0:50.2017:19:19:642:0:0:0,-5.71957,-10 0/1:99:29:17:632:12:454:-10,0,-10 1/1:99:48:0:0:48:1703:-10,-10,0 0/1:99:23:13:488:10:371:-10,0,-10 0/1:99:43:32:1177:10:356:-10,0,-10 0/0:47.1914:18:18:676:0:0:0,-5.41854,-10 1/1:81.5723:30:0:0:30:1085:-10,-9.0309,0 1/1:75.5517:28:0:0:28:1004:-10,-8.42884,0 0/1:99:36:17:637:19:657:-10,0,-10 1/1:99:40:0:0:40:1385:-10,-10,0 1/1:39.4281:16:0:0:16:576:-10,-4.81648,0 0/0:98.3544:35:35:1306:0:0:0,-10,-10 1/1:99:50:0:0:50:1777:-10,-10,0 0/0:20.0987:9:9:331:0:0:0,-2.70927,-10 1/1:21.3663:10:0:0:10:346:-10,-3.0103,0 0/0:65.2532:24:24:873:0:0:0,-7.22472,-10 1/1:27.3869:12:0:0:12:450:-10,-3.61236,0 0/0:99:38:37:1349:0:0:0,-10,-10 0/0:14.0781:7:7:262:0:0:0,-2.10721,-10 1/1:66.5208:25:0:0:25:934:-10,-7.52575,0 0/1:99:32:12:427:20:727:-10,0,-10 0/0:80.3045:29:29:1076:0:0:0,-8.72987,-10 0/1:99:25:10:351:15:542:-10,0,-10 1/1:99:43:0:0:43:1532:-10,-10,0 0/0:53.212:20:20:735:0:0:0,-6.0206,-10 0/0:95.3569:34:34:1208:0:0:0,-10,-10 0/1:99:41:13:478:28:1046:-10,0,-10 0/1:99:29:10:344:19:713:-10,0,-10 1/1:69.5311:26:0:0:26:986:-10,-7.82678,0 1/1:99:80:0:0:80:2901:-10,-10,0 1/1:99:38:0:0:38:1328:-10,-10,0 1/1:57.4899:22:0:0:22:814:-10,-6.62266,0 1/1:99:45:0:0:44:1555:-10,-10,0 1/1:21.3663:10:0:0:10:347:-10,-3.0103,0 1/1:99:57:0:0:57:2093:-10,-10,0 1/1:48.459:19:0:0:19:715:-10,-5.71957,0 1/1:30.3972:13:0:0:13:479:-10,-3.91339,0 1/1:99:73:0:0:73:2647:-10,-10,0 1/1:57.4899:22:0:0:22:810:-10,-6.62266,0 1/1:54.4796:21:0:0:21:736:-10,-6.32163,0 0/1:35.9033:10:9:307:1:38:-1.7897,0,-10 0/0:80.3045:29:29:1077:0:0:0,-8.72987,-10 0/0:41.1708:16:16:589:0:0:0,-4.81648,-10 0/0:99:40:40:1488:0:0:0,-10,-10 0/0:56.2223:21:21:793:0:0:0,-6.32163,-10 0/0:99:49:49:1766:0:0:0,-10,-10 0/0:99:38:38:1383:0:0:0,-10,-10 0/0:35.1502:14:14:502:0:0:0,-4.21442,-10 0/0:99:51:51:1859:0:0:0,-10,-10 0/0:68.2635:25:25:885:0:0:0,-7.52575,-10 0/0:41.1708:16:16:582:0:0:0,-4.81648,-10 0/0:99:44:44:1605:0:0:0,-10,-10 0/0:29.1296:12:12:450:0:0:0,-3.61236,-10 0/0:68.2635:25:25:938:0:0:0,-7.52575,-10 0/0:99:42:42:1524:0:0:0,-10,-10 0/0:99:42:42:1528:0:0:0,-10,-10 0/0:53.212:20:20:737:0:0:0,-6.0206,-10 0/0:99:44:44:1624:0:0:0,-10,-10 0/0:44.1811:17:17:633:0:0:0,-5.11751,-10 0/0:56.2223:21:21:737:0:0:0,-6.32163,-10 0/0:41.1708:16:16:600:0:0:0,-4.81648,-10 0/0:8.05747:5:5:190:0:0:0,-1.50515,-10 0/0:35.1502:14:14:507:0:0:0,-4.21442,-10 0/0:99:49:49:1762:0:0:0,-10,-10 0/0:99:48:48:1785:0:0:0,-10,-10 0/0:83.3146:30:30:1104:0:0:0,-9.0309,-10 0/0:86.3245:32:31:1170:0:0:0,-9.33193,-10 0/0:86.3245:31:31:1144:0:0:0,-9.33193,-10 0/0:38.1605:15:15:554:0:0:0,-4.51545,-10 0/1:36.403:26:2:76:24:905:-10,0,-1.9051 1/1:45.4487:18:0:0:18:672:-10,-5.41854,0 0/1:0.275445:3:3:113:0:0:0,-0.90309,-10 0/0:71.2737:26:26:955:0:0:0,-7.82678,-10 0/0:89.3341:32:32:1165:0:0:0,-9.63296,-10 0/0:53.212:20:20:755:0:0:0,-6.0206,-10 scaffold_202 1485780 . G A 1087.84 . AB=0.447917;ABP=5.27225;AC=4;AF=0.0217391;AN=184;AO=46;CIGAR=1X;DP=1697;DPB=1697;DPRA=1.02419;EPP=4.70971;EPPR=4.81306;GTI=3;LEN=1;MEANALT=1.14286;MQM=60;MQMR=59.9739;NS=92;NUMALT=1;ODDS=2.9038;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1642;QR=60340;RO=1649;RPP=102.898;RPPR=3531.84;RUN=1;SAF=20;SAP=4.70971;SAR=26;SRF=837;SRP=3.83333;SRR=812;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.5218:15:14:494:0:0:0,-4.21442,-10 0/0:21.3879:1:1:34:0:0:0,-0.30103,-3.4 0/0:69.5527:17:17:616:0:0:0,-5.11751,-10 0/0:60.5218:14:14:502:0:0:0,-4.21442,-10 0/0:48.4806:10:10:364:0:0:0,-3.0103,-10 0/0:33.4291:5:5:190:0:0:0,-1.50515,-10 0/0:90.6239:24:24:901:0:0:0,-7.22472,-10 0/0:84.6043:22:22:811:0:0:0,-6.62266,-10 0/0:48.4806:10:10:373:0:0:0,-3.0103,-10 0/0:21.3879:1:1:38:0:0:0,-0.30103,-3.8 0/1:0.00280331:9:0:0:9:320:-10,-2.70927,0 0/0:36.4394:6:6:226:0:0:0,-1.80618,-10 0/1:99:28:17:614:10:377:-10,0,-10 0/1:99:38:25:924:13:481:-10,0,-10 0/0:63.5321:15:15:557:0:0:0,-4.51545,-10 0/0:84.6043:22:22:836:0:0:0,-6.62266,-10 0/0:96.642:26:26:922:0:0:0,-7.82678,-10 0/0:45.4703:9:9:338:0:0:0,-2.70927,-10 0/1:99:21:10:365:11:394:-10,0,-10 0/0:99:33:33:1184:0:0:0,-9.93399,-10 0/0:48.4806:10:10:368:0:0:0,-3.0103,-10 0/0:87.6141:23:23:856:0:0:0,-6.92369,-10 0/0:54.5012:12:12:452:0:0:0,-3.61236,-10 0/0:54.5012:12:12:425:0:0:0,-3.61236,-10 0/0:93.6334:25:25:886:0:0:0,-7.52575,-10 0/0:87.6141:23:23:825:0:0:0,-6.92369,-10 0/0:78.5836:20:20:701:0:0:0,-6.0206,-10 0/0:60.5218:14:14:520:0:0:0,-4.21442,-10 0/0:87.6141:23:23:821:0:0:0,-6.92369,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:33.4291:5:5:190:0:0:0,-1.50515,-10 0/0:60.5218:14:14:526:0:0:0,-4.21442,-10 0/0:69.5527:17:17:620:0:0:0,-5.11751,-10 0/0:51.4909:11:11:394:0:0:0,-3.31133,-10 0/0:66.5424:16:16:569:0:0:0,-4.81648,-10 0/0:39.4497:7:7:266:0:0:0,-2.10721,-10 0/0:0.220717:14:13:464:1:38:-0.731708,0,-10 0/0:84.6043:22:22:825:0:0:0,-6.62266,-10 0/0:57.5115:13:13:477:0:0:0,-3.91339,-10 0/0:69.5527:17:17:624:0:0:0,-5.11751,-10 0/0:99:36:36:1353:0:0:0,-10,-10 0/0:90.6239:24:24:797:0:0:0,-7.22472,-10 0/0:57.5115:13:13:489:0:0:0,-3.91339,-10 0/0:99:34:34:1274:0:0:0,-10,-10 0/0:87.6141:23:23:828:0:0:0,-6.92369,-10 0/0:63.5321:15:15:562:0:0:0,-4.51545,-10 0/0:99:29:29:1082:0:0:0,-8.72987,-10 0/0:99:32:32:1138:0:0:0,-9.63296,-10 0/0:66.5424:16:16:603:0:0:0,-4.81648,-10 0/0:99:33:33:1194:0:0:0,-9.93399,-10 0/0:66.5424:16:16:602:0:0:0,-4.81648,-10 0/0:87.6141:23:23:864:0:0:0,-6.92369,-10 0/0:63.5321:15:15:555:0:0:0,-4.51545,-10 0/0:24.3982:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:66.5424:16:16:566:0:0:0,-4.81648,-10 0/0:69.5527:17:17:636:0:0:0,-5.11751,-10 0/0:24.3982:2:2:71:0:0:0,-0.60206,-6.745 0/0:78.5836:20:20:722:0:0:0,-6.0206,-10 0/0:39.4497:7:7:266:0:0:0,-2.10721,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:84.6043:22:22:783:0:0:0,-6.62266,-10 0/0:99:36:36:1356:0:0:0,-10,-10 0/0:84.6043:22:22:746:0:0:0,-6.62266,-10 0/0:48.4806:10:10:379:0:0:0,-3.0103,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:72.563:18:18:680:0:0:0,-5.41854,-10 0/0:51.4909:11:11:418:0:0:0,-3.31133,-10 0/0:99:32:32:1118:0:0:0,-9.63296,-10 0/0:72.563:18:18:649:0:0:0,-5.41854,-10 0/0:78.5836:20:20:740:0:0:0,-6.0206,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:87.6141:23:23:827:0:0:0,-6.92369,-10 0/0:54.5012:12:12:452:0:0:0,-3.61236,-10 0/0:93.6334:25:25:921:0:0:0,-7.52575,-10 0/0:66.5424:16:16:603:0:0:0,-4.81648,-10 0/0:81.5939:21:21:772:0:0:0,-6.32163,-10 0/0:51.4909:11:11:414:0:0:0,-3.31133,-10 0/0:42.46:8:8:304:0:0:0,-2.40824,-10 0/0:60.5218:14:14:512:0:0:0,-4.21442,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:90.6239:24:24:874:0:0:0,-7.22472,-10 0/0:90.6239:24:24:908:0:0:0,-7.22472,-10 0/0:75.5733:19:19:685:0:0:0,-5.71957,-10 0/0:93.6334:25:25:943:0:0:0,-7.52575,-10 0/0:0.0964052:6:5:157:1:16:-0.571971,0,-10 0/0:63.5321:15:15:568:0:0:0,-4.51545,-10 0/0:42.4283:16:15:558:1:16:0,-2.01236,-10 0/0:33.4291:5:5:190:0:0:0,-1.50515,-10 0/0:90.6239:24:24:909:0:0:0,-7.22472,-10 0/0:63.5321:15:15:505:0:0:0,-4.51545,-10 0/0:87.6141:23:23:822:0:0:0,-6.92369,-10 scaffold_202 1486710 . T C 571.766 . AB=0.676471;ABP=12.2071;AC=2;AF=0.0108696;AN=184;AO=23;CIGAR=1X;DP=1803;DPB=1803;DPRA=0.864895;EPP=3.10471;EPPR=4.50555;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9601;NS=92;NUMALT=1;ODDS=7.08287;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=848;QR=64537;RO=1779;RPP=52.9542;RPPR=3866.06;RUN=1;SAF=12;SAP=3.10471;SAR=11;SRF=872;SRP=4.50555;SRR=907;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:66.8916:14:14:497:0:0:0,-4.21442,-10 0/0:72.9122:16:16:584:0:0:0,-4.81648,-10 0/0:99:25:25:908:0:0:0,-7.52575,-10 0/0:48.8298:8:8:302:0:0:0,-2.40824,-10 0/0:54.8504:10:10:371:0:0:0,-3.0103,-10 0/0:54.8504:10:10:369:0:0:0,-3.0103,-10 0/0:99:40:40:1433:0:0:0,-10,-10 0/0:93.9833:23:23:873:0:0:0,-6.92369,-10 0/0:66.8916:14:14:521:0:0:0,-4.21442,-10 0/0:42.8092:6:6:226:0:0:0,-1.80618,-10 0/0:51.8401:9:9:341:0:0:0,-2.70927,-10 0/0:33.7783:3:3:110:0:0:0,-0.90309,-10 0/0:99:31:31:1122:0:0:0,-9.33193,-10 0/0:99:41:41:1476:0:0:0,-10,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:87.9635:21:21:786:0:0:0,-6.32163,-10 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:39.7989:5:5:186:0:0:0,-1.50515,-10 0/0:69.9019:15:15:503:0:0:0,-4.51545,-10 0/0:99:37:37:1331:0:0:0,-10,-10 0/0:78.9328:18:18:610:0:0:0,-5.41854,-10 0/0:90.9735:22:22:827:0:0:0,-6.62266,-10 0/0:57.8607:11:11:393:0:0:0,-3.31133,-10 0/0:99:25:25:891:0:0:0,-7.52575,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:99:27:27:962:0:0:0,-8.12781,-10 0/0:75.9225:17:17:616:0:0:0,-5.11751,-10 0/0:66.8916:14:14:483:0:0:0,-4.21442,-10 0/0:60.871:12:12:442:0:0:0,-3.61236,-10 0/0:99:37:37:1349:0:0:0,-10,-10 0/0:42.8092:6:6:228:0:0:0,-1.80618,-10 0/0:69.9019:15:15:529:0:0:0,-4.51545,-10 0/0:99:26:26:971:0:0:0,-7.82678,-10 0/0:51.8401:9:9:331:0:0:0,-2.70927,-10 0/0:99:30:30:1050:0:0:0,-9.0309,-10 0/0:51.8401:9:9:336:0:0:0,-2.70927,-10 0/0:51.8401:9:9:310:0:0:0,-2.70927,-10 0/0:99:30:30:1100:0:0:0,-9.0309,-10 0/0:51.8401:9:9:339:0:0:0,-2.70927,-10 0/0:63.8813:13:13:453:0:0:0,-3.91339,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:54.8504:10:10:365:0:0:0,-3.0103,-10 0/0:84.9533:20:20:722:0:0:0,-6.0206,-10 0/0:99:30:30:1059:0:0:0,-9.0309,-10 0/0:99:26:26:965:0:0:0,-7.82678,-10 0/0:54.8504:10:10:376:0:0:0,-3.0103,-10 0/0:99:35:35:1256:0:0:0,-10,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:69.9019:15:15:559:0:0:0,-4.51545,-10 0/0:99:43:43:1582:0:0:0,-10,-10 0/0:78.9328:18:18:636:0:0:0,-5.41854,-10 0/0:99:36:36:1305:0:0:0,-10,-10 0/0:84.9533:20:20:721:0:0:0,-6.0206,-10 0/0:39.7989:5:5:190:0:0:0,-1.50515,-10 0/0:99:46:45:1649:0:0:0,-10,-10 0/0:63.8813:13:13:447:0:0:0,-3.91339,-10 0/0:87.9635:21:21:787:0:0:0,-6.32163,-10 0/0:45.8195:7:7:259:0:0:0,-2.10721,-10 0/0:87.9635:21:21:775:0:0:0,-6.32163,-10 0/0:45.8195:7:7:259:0:0:0,-2.10721,-10 0/0:90.9735:22:22:742:0:0:0,-6.62266,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:99:39:39:1438:0:0:0,-10,-10 0/0:69.9019:15:15:538:0:0:0,-4.51545,-10 0/0:57.8607:11:11:396:0:0:0,-3.31133,-10 0/0:90.9735:22:22:810:0:0:0,-6.62266,-10 0/0:69.9019:15:15:522:0:0:0,-4.51545,-10 0/0:54.8504:10:10:356:0:0:0,-3.0103,-10 0/0:99:31:31:1066:0:0:0,-9.33193,-10 0/0:48.8298:8:8:299:0:0:0,-2.40824,-10 0/0:81.9431:19:19:694:0:0:0,-5.71957,-10 0/0:99:25:25:840:0:0:0,-7.52575,-10 0/0:87.9635:21:21:784:0:0:0,-6.32163,-10 0/0:72.9122:16:16:597:0:0:0,-4.81648,-10 0/0:99:34:34:1222:0:0:0,-10,-10 0/0:51.8401:9:9:341:0:0:0,-2.70927,-10 0/0:81.9431:19:19:661:0:0:0,-5.71957,-10 0/0:90.9735:22:22:779:0:0:0,-6.62266,-10 0/1:3.39377e-05:8:0:0:8:304:-10,-2.40824,0 0/0:63.8813:13:13:494:0:0:0,-3.91339,-10 0/1:99:26:11:373:15:544:-10,0,-10 0/0:99:31:31:1147:0:0:0,-9.33193,-10 0/0:99:25:25:905:0:0:0,-7.52575,-10 0/0:72.9122:16:16:598:0:0:0,-4.81648,-10 0/0:57.8607:11:11:385:0:0:0,-3.31133,-10 0/0:30.768:2:2:75:0:0:0,-0.60206,-7.125 0/0:93.9833:23:23:850:0:0:0,-6.92369,-10 0/0:66.8916:14:14:523:0:0:0,-4.21442,-10 0/0:54.8504:10:10:356:0:0:0,-3.0103,-10 0/0:69.9019:15:15:564:0:0:0,-4.51545,-10 0/0:99:26:26:932:0:0:0,-7.82678,-10 0/0:66.8916:14:14:519:0:0:0,-4.21442,-10 scaffold_213 562867 . G A 9869.1 . AB=0.519856;ABP=3.95885;AC=33;AF=0.179348;AN=184;AO=350;CIGAR=1X;DP=1814;DPB=1814;DPRA=1.15463;EPP=12.937;EPPR=36.8529;GTI=2;LEN=1;MEANALT=1.04545;MQM=60;MQMR=59.8325;NS=92;NUMALT=1;ODDS=0.0926814;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12800;QR=53297;RO=1463;RPP=638.321;RPPR=2492.15;RUN=1;SAF=170;SAP=3.63072;SAR=180;SRF=738;SRP=3.26114;SRR=725;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.7718:17:17:633:0:0:0,-5.11751,-10 0/0:41.7306:13:13:456:0:0:0,-3.91339,-10 0/0:68.8233:22:22:814:0:0:0,-6.62266,-10 0/0:35.71:11:11:394:0:0:0,-3.31133,-10 1/1:6.14607:8:0:0:8:299:-10,-2.40824,0 1/1:15.177:11:0:0:11:404:-10,-3.31133,0 1/1:99:41:0:0:41:1481:-10,-10,0 0/0:71.8336:23:23:807:0:0:0,-6.92369,-10 0/0:38.7203:12:12:390:0:0:0,-3.61236,-10 0/0:8.61727:2:2:76:0:0:0,-0.60206,-7.22 0/0:14.6379:4:4:151:0:0:0,-1.20412,-10 0/1:0.00478295:17:1:38:16:572:-10,-0.087061,0 0/1:99:24:11:416:13:456:-10,0,-10 0/0:99:39:39:1396:0:0:0,-10,-10 0/0:62.8027:20:20:739:0:0:0,-6.0206,-10 0/1:99:28:12:450:16:603:-10,0,-10 1/1:84.4137:34:0:0:34:1256:-10,-10,0 1/1:15.177:11:0:0:11:408:-10,-3.31133,0 1/1:69.3624:29:0:0:29:1091:-10,-8.72987,0 0/0:99:42:42:1552:0:0:0,-10,-10 0/0:47.7512:15:15:566:0:0:0,-4.51545,-10 0/0:62.8027:20:20:692:0:0:0,-6.0206,-10 0/0:32.6997:10:10:374:0:0:0,-3.0103,-10 0/0:62.8027:20:20:724:0:0:0,-6.0206,-10 0/1:0.00464219:21:1:38:20:744:-10,-1.19941,0 0/0:83.8746:27:27:1008:0:0:0,-8.12781,-10 1/1:36.2491:18:0:0:18:677:-10,-5.41854,0 1/1:30.2285:16:0:0:16:570:-10,-4.81648,0 0/0:62.8027:20:20:760:0:0:0,-6.0206,-10 0/1:99:39:16:584:23:826:-10,0,-10 0/0:20.6585:6:6:228:0:0:0,-1.80618,-10 0/1:45.7545:11:1:38:10:376:-10,0,-1.53006 0/0:32.6997:10:10:378:0:0:0,-3.0103,-10 0/0:26.6791:8:8:290:0:0:0,-2.40824,-10 0/0:98.9212:32:32:1198:0:0:0,-9.63296,-10 0/0:14.6379:4:4:145:0:0:0,-1.20412,-10 0/0:44.7409:14:14:509:0:0:0,-4.21442,-10 0/0:86.8848:28:28:1038:0:0:0,-8.42884,-10 0/0:65.813:21:21:780:0:0:0,-6.32163,-10 0/0:56.7821:18:18:668:0:0:0,-5.41854,-10 0/1:99:24:17:613:6:209:-10,0,-10 0/0:44.7409:14:14:510:0:0:0,-4.21442,-10 0/0:47.7512:15:15:549:0:0:0,-4.51545,-10 0/0:92.9044:30:30:1116:0:0:0,-9.0309,-10 0/0:71.8336:23:23:855:0:0:0,-6.92369,-10 0/0:29.6894:9:9:324:0:0:0,-2.70927,-10 0/0:99:44:44:1599:0:0:0,-10,-10 0/0:99:35:35:1286:0:0:0,-10,-10 0/0:26.6791:8:8:304:0:0:0,-2.40824,-10 0/1:99:39:26:976:13:478:-10,0,-10 0/0:47.7512:15:15:509:0:0:0,-4.51545,-10 0/1:99:40:24:837:16:561:-10,0,-10 1/1:27.2182:15:0:0:15:552:-10,-4.51545,0 0/0:20.6585:6:6:224:0:0:0,-1.80618,-10 0/0:99:41:41:1475:0:0:0,-10,-10 0/0:41.7306:13:13:491:0:0:0,-3.91339,-10 0/0:56.7821:18:18:656:0:0:0,-5.41854,-10 1/1:9.15637:9:0:0:9:330:-10,-2.70927,0 0/0:53.7718:17:17:638:0:0:0,-5.11751,-10 0/0:26.6791:8:8:281:0:0:0,-2.40824,-10 0/0:99:36:36:1319:0:0:0,-10,-10 0/0:47.7512:15:15:563:0:0:0,-4.51545,-10 0/0:99:44:44:1618:0:0:0,-10,-10 0/0:77.8541:25:25:878:0:0:0,-7.52575,-10 0/0:68.8233:22:22:791:0:0:0,-6.62266,-10 0/0:59.7924:19:19:644:0:0:0,-5.71957,-10 0/0:47.7512:15:15:544:0:0:0,-4.51545,-10 0/0:56.7821:18:18:627:0:0:0,-5.41854,-10 0/0:99:37:37:1306:0:0:0,-10,-10 0/0:26.6791:8:8:295:0:0:0,-2.40824,-10 0/0:47.7512:15:15:564:0:0:0,-4.51545,-10 0/0:99:38:38:1403:0:0:0,-10,-10 0/0:80.8644:26:26:938:0:0:0,-7.82678,-10 0/0:71.8336:23:23:806:0:0:0,-6.92369,-10 0/0:99:40:40:1455:0:0:0,-10,-10 0/0:26.6791:8:8:275:0:0:0,-2.40824,-10 0/1:14.6979:14:13:491:1:38:-0.731708,0,-10 0/0:35.71:11:11:418:0:0:0,-3.31133,-10 0/0:32.6997:10:10:378:0:0:0,-3.0103,-10 0/0:35.71:11:11:407:0:0:0,-3.31133,-10 0/0:95.9134:31:31:1117:0:0:0,-9.33193,-10 0/0:77.8541:25:25:919:0:0:0,-7.52575,-10 0/0:32.6997:10:10:359:0:0:0,-3.0103,-10 0/0:65.813:21:21:734:0:0:0,-6.32163,-10 0/1:99:20:10:359:10:380:-10,0,-10 1/1:24.2079:14:0:0:14:489:-10,-4.21442,0 0/0:47.7512:15:15:557:0:0:0,-4.51545,-10 0/0:20.6585:6:6:204:0:0:0,-1.80618,-10 0/0:17.6482:5:5:180:0:0:0,-1.50515,-10 0/0:32.6997:10:10:354:0:0:0,-3.0103,-10 0/0:32.6997:10:10:355:0:0:0,-3.0103,-10 0/0:71.8336:23:23:866:0:0:0,-6.92369,-10 scaffold_213 562884 . A T 1533.4 . AB=0.597222;ABP=8.92153;AC=6;AF=0.0326087;AN=184;AO=63;CIGAR=1X;DP=1818;DPB=1818;DPRA=1.26888;EPP=3.872;EPPR=48.2;GTI=2;LEN=1;MEANALT=1;MQM=59.8095;MQMR=59.8671;NS=92;NUMALT=1;ODDS=0.632001;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2237;QR=64046;RO=1753;RPP=139.813;RPPR=3044.67;RUN=1;SAF=29;SAP=3.872;SAR=34;SRF=870;SRP=3.21964;SRR=883;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.7455:18:18:640:0:0:0,-5.41854,-10 0/0:59.694:13:13:487:0:0:0,-3.91339,-10 0/0:86.7868:22:22:819:0:0:0,-6.62266,-10 0/0:53.6734:11:11:395:0:0:0,-3.31133,-10 0/0:44.6425:8:8:301:0:0:0,-2.40824,-10 0/0:53.6734:11:11:395:0:0:0,-3.31133,-10 0/0:99:41:41:1519:0:0:0,-10,-10 0/0:89.7971:23:23:797:0:0:0,-6.92369,-10 0/0:56.6837:12:12:416:0:0:0,-3.61236,-10 0/0:26.5807:2:2:67:0:0:0,-0.60206,-6.365 0/0:32.6013:4:4:152:0:0:0,-1.20412,-10 0/0:71.7352:17:17:611:0:0:0,-5.11751,-10 0/0:95.8159:25:25:891:0:0:0,-7.52575,-10 0/0:99:42:41:1537:1:16:0,-9.42001,-10 0/0:80.7661:20:20:737:0:0:0,-6.0206,-10 0/0:99:28:28:1057:0:0:0,-8.42884,-10 0/0:99:34:34:1271:0:0:0,-10,-10 0/0:53.6734:11:11:417:0:0:0,-3.31133,-10 0/0:99:31:31:1167:0:0:0,-9.33193,-10 0/0:99:42:42:1520:0:0:0,-10,-10 0/0:65.7146:15:15:565:0:0:0,-4.51545,-10 0/0:80.7661:20:20:725:0:0:0,-6.0206,-10 0/0:50.6631:10:10:377:0:0:0,-3.0103,-10 0/0:80.7661:20:20:743:0:0:0,-6.0206,-10 0/0:80.7661:20:20:736:0:0:0,-6.0206,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:74.7455:18:18:670:0:0:0,-5.41854,-10 0/0:68.7249:16:16:533:0:0:0,-4.81648,-10 0/0:80.7661:20:20:760:0:0:0,-6.0206,-10 0/0:99:38:38:1434:0:0:0,-10,-10 0/0:38.6219:6:6:216:0:0:0,-1.80618,-10 0/0:53.6734:11:11:407:0:0:0,-3.31133,-10 0/0:50.6631:10:10:371:0:0:0,-3.0103,-10 0/0:44.6425:8:8:269:0:0:0,-2.40824,-10 0/0:99:31:31:1136:0:0:0,-9.33193,-10 0/0:32.6013:4:4:139:0:0:0,-1.20412,-10 0/0:62.7043:14:14:499:0:0:0,-4.21442,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:83.7764:21:21:774:0:0:0,-6.32163,-10 0/0:74.7455:18:18:668:0:0:0,-5.41854,-10 0/0:92.8065:24:24:879:0:0:0,-7.22472,-10 0/0:62.7043:14:14:483:0:0:0,-4.21442,-10 0/0:62.7043:14:14:479:0:0:0,-4.21442,-10 0/0:99:30:29:1043:0:0:0,-8.72987,-10 0/0:89.7971:23:23:873:0:0:0,-6.92369,-10 0/0:47.6528:9:9:334:0:0:0,-2.70927,-10 0/0:99:46:46:1688:0:0:0,-10,-10 0/0:99:35:35:1261:0:0:0,-10,-10 0/0:44.6425:8:8:292:0:0:0,-2.40824,-10 0/0:99:40:39:1418:1:16:0,-8.83914,-10 0/0:65.7146:15:15:521:0:0:0,-4.51545,-10 0/0:99:41:41:1448:0:0:0,-10,-10 0/0:65.7146:15:15:544:0:0:0,-4.51545,-10 0/0:38.6219:6:6:206:0:0:0,-1.80618,-10 0/0:99:41:41:1527:0:0:0,-10,-10 0/0:62.7043:14:14:532:0:0:0,-4.21442,-10 0/0:74.7455:18:18:674:0:0:0,-5.41854,-10 0/0:47.6528:9:9:323:0:0:0,-2.70927,-10 0/0:71.7352:17:17:641:0:0:0,-5.11751,-10 0/0:44.6425:8:8:281:0:0:0,-2.40824,-10 0/0:99:36:36:1360:0:0:0,-10,-10 0/0:65.7146:15:15:555:0:0:0,-4.51545,-10 0/0:99:43:43:1581:0:0:0,-10,-10 0/0:92.8065:25:24:886:0:0:0,-7.22472,-10 0/0:86.7868:22:22:785:0:0:0,-6.62266,-10 0/0:77.7558:19:19:697:0:0:0,-5.71957,-10 0/0:65.7146:15:15:542:0:0:0,-4.51545,-10 1/1:4.62004:18:0:0:18:616:-10,-5.41854,0 0/1:99:37:20:705:17:643:-10,0,-10 0/1:0.00371175:8:0:0:8:277:-10,-2.40824,0 0/0:65.7146:15:15:546:0:0:0,-4.51545,-10 0/0:99:38:38:1397:0:0:0,-10,-10 0/0:98.8244:26:26:934:0:0:0,-7.82678,-10 0/0:89.7971:23:23:822:0:0:0,-6.92369,-10 0/0:99:40:40:1469:0:0:0,-10,-10 0/1:0.00185548:7:0:0:7:259:-10,-2.10721,0 0/0:62.7043:14:14:529:0:0:0,-4.21442,-10 0/0:53.6734:11:11:418:0:0:0,-3.31133,-10 0/0:50.6631:10:10:370:0:0:0,-3.0103,-10 0/0:53.6734:11:11:394:0:0:0,-3.31133,-10 0/0:99:30:30:1094:0:0:0,-9.0309,-10 0/0:95.8159:25:25:940:0:0:0,-7.52575,-10 0/0:50.6631:10:10:339:0:0:0,-3.0103,-10 0/0:83.7764:21:21:731:0:0:0,-6.32163,-10 0/1:99:20:9:338:11:410:-10,0,-10 0/0:62.7043:14:14:495:0:0:0,-4.21442,-10 0/0:65.7146:15:15:545:0:0:0,-4.51545,-10 0/0:38.6219:6:6:228:0:0:0,-1.80618,-10 0/0:35.6116:5:5:164:0:0:0,-1.50515,-10 0/0:50.6631:10:10:366:0:0:0,-3.0103,-10 0/0:50.6631:10:10:357:0:0:0,-3.0103,-10 0/0:89.7971:23:23:820:0:0:0,-6.92369,-10 scaffold_213 562885 . T C 506.316 . AB=0.552632;ABP=3.9246;AC=1;AF=0.00543478;AN=184;AO=22;CIGAR=1X;DP=1819;DPB=1819;DPRA=1.40306;EPP=3.0103;EPPR=50.4631;GTI=0;LEN=1;MEANALT=1;MQM=58.9091;MQMR=59.8835;NS=92;NUMALT=1;ODDS=2.18424;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=776;QR=65600;RO=1794;RPP=50.7827;RPPR=3132.72;RUN=1;SAF=11;SAP=3.0103;SAR=11;SRF=887;SRP=3.49446;SRR=907;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.3414:18:18:657:0:0:0,-5.41854,-10 0/0:45.2899:13:13:494:0:0:0,-3.91339,-10 0/0:72.3826:22:22:804:0:0:0,-6.62266,-10 0/0:39.2693:11:11:414:0:0:0,-3.31133,-10 0/0:30.2384:8:8:273:0:0:0,-2.40824,-10 0/0:39.2693:11:11:391:0:0:0,-3.31133,-10 0/0:99:41:41:1496:0:0:0,-10,-10 0/0:75.3929:23:23:833:0:0:0,-6.92369,-10 0/0:42.2796:12:12:429:0:0:0,-3.61236,-10 0/0:12.1766:2:2:75:0:0:0,-0.60206,-7.125 0/0:18.1972:4:4:152:0:0:0,-1.20412,-10 0/0:57.3311:17:17:611:0:0:0,-5.11751,-10 0/0:84.4236:26:26:954:0:0:0,-7.82678,-10 0/0:99:42:42:1531:0:0:0,-10,-10 0/0:66.362:20:20:754:0:0:0,-6.0206,-10 0/0:90.4443:28:28:1056:0:0:0,-8.42884,-10 0/0:99:34:34:1284:0:0:0,-10,-10 0/0:39.2693:11:11:417:0:0:0,-3.31133,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:99:42:42:1520:0:0:0,-10,-10 0/0:51.3105:15:15:568:0:0:0,-4.51545,-10 0/0:66.362:20:20:741:0:0:0,-6.0206,-10 0/0:36.259:10:10:378:0:0:0,-3.0103,-10 0/0:63.3517:20:19:717:0:0:0,-5.71957,-10 0/0:66.362:20:20:725:0:0:0,-6.0206,-10 0/0:87.4338:27:27:1011:0:0:0,-8.12781,-10 0/0:60.3414:18:18:634:0:0:0,-5.41854,-10 0/0:54.3208:16:16:579:0:0:0,-4.81648,-10 0/0:66.362:20:20:755:0:0:0,-6.0206,-10 0/0:99:38:38:1401:0:0:0,-10,-10 0/0:24.2178:6:6:215:0:0:0,-1.80618,-10 0/0:39.2693:11:11:390:0:0:0,-3.31133,-10 0/0:36.259:10:10:369:0:0:0,-3.0103,-10 0/0:30.2384:8:8:282:0:0:0,-2.40824,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:18.1972:4:4:151:0:0:0,-1.20412,-10 0/0:48.3002:14:14:509:0:0:0,-4.21442,-10 0/0:87.4338:27:27:1008:0:0:0,-8.12781,-10 0/0:69.3723:21:21:770:0:0:0,-6.32163,-10 0/0:60.3414:18:18:658:0:0:0,-5.41854,-10 0/0:78.4032:24:24:851:0:0:0,-7.22472,-10 0/0:48.3002:14:14:515:0:0:0,-4.21442,-10 0/0:48.3002:14:14:518:0:0:0,-4.21442,-10 0/0:96.4622:30:30:1082:0:0:0,-9.0309,-10 0/0:75.3929:23:23:870:0:0:0,-6.92369,-10 0/0:33.2487:9:9:341:0:0:0,-2.70927,-10 0/0:99:46:46:1695:0:0:0,-10,-10 0/0:99:35:35:1255:0:0:0,-10,-10 0/0:30.2384:8:8:282:0:0:0,-2.40824,-10 0/0:99:40:40:1449:0:0:0,-10,-10 0/0:51.3105:15:15:526:0:0:0,-4.51545,-10 0/0:99:41:41:1462:0:0:0,-10,-10 0/0:51.3105:15:15:538:0:0:0,-4.51545,-10 0/0:24.2178:6:6:219:0:0:0,-1.80618,-10 0/0:99:41:41:1486:0:0:0,-10,-10 0/0:48.3002:14:14:532:0:0:0,-4.21442,-10 0/0:60.3414:18:18:657:0:0:0,-5.41854,-10 0/0:33.2487:9:9:320:0:0:0,-2.70927,-10 0/0:10.5079:17:16:599:1:38:0,-0.087061,-10 0/0:30.2384:8:8:281:0:0:0,-2.40824,-10 0/0:99:36:36:1321:0:0:0,-10,-10 0/0:51.3105:15:15:515:0:0:0,-4.51545,-10 0/0:99:43:43:1595:0:0:0,-10,-10 0/0:81.4134:25:25:879:0:0:0,-7.52575,-10 0/0:72.3826:22:22:777:0:0:0,-6.62266,-10 0/0:60.3414:19:18:640:0:0:0,-5.41854,-10 0/0:51.3105:15:15:547:0:0:0,-4.51545,-10 0/0:60.3414:18:18:658:0:0:0,-5.41854,-10 0/0:99:37:37:1348:0:0:0,-10,-10 0/0:27.2281:8:7:264:0:0:0,-2.10721,-10 0/0:51.3105:15:15:544:0:0:0,-4.51545,-10 0/1:99:38:17:632:21:738:-10,0,-10 0/0:84.4236:26:26:946:0:0:0,-7.82678,-10 0/0:75.3929:23:23:813:0:0:0,-6.92369,-10 0/0:99:40:40:1471:0:0:0,-10,-10 0/0:27.2281:7:7:259:0:0:0,-2.10721,-10 0/0:48.3002:14:14:530:0:0:0,-4.21442,-10 0/0:39.2693:11:11:418:0:0:0,-3.31133,-10 0/0:36.259:10:10:378:0:0:0,-3.0103,-10 0/0:39.2693:11:11:417:0:0:0,-3.31133,-10 0/0:96.4622:30:30:1110:0:0:0,-9.0309,-10 0/0:81.4134:25:25:941:0:0:0,-7.52575,-10 0/0:36.259:10:10:349:0:0:0,-3.0103,-10 0/0:69.3723:21:21:762:0:0:0,-6.32163,-10 0/0:66.362:20:20:737:0:0:0,-6.0206,-10 0/0:48.3002:14:14:498:0:0:0,-4.21442,-10 0/0:51.3105:15:15:556:0:0:0,-4.51545,-10 0/0:24.2178:6:6:228:0:0:0,-1.80618,-10 0/0:21.2075:5:5:168:0:0:0,-1.50515,-10 0/0:36.259:10:10:371:0:0:0,-3.0103,-10 0/0:36.259:10:10:357:0:0:0,-3.0103,-10 0/0:75.3929:23:23:829:0:0:0,-6.92369,-10 scaffold_213 851214 . A C 4801.51 . AB=0.52795;ABP=4.10278;AC=16;AF=0.0869565;AN=184;AO=179;CIGAR=1X;DP=1816;DPB=1816;DPRA=1.21528;EPP=4.47817;EPPR=3.3946;GTI=1;LEN=1;MEANALT=1.08333;MQM=60;MQMR=59.9731;NS=92;NUMALT=1;ODDS=1.63577;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6478;QR=60520;RO=1633;RPP=383.066;RPPR=3497.1;RUN=1;SAF=96;SAP=5.06046;SAR=83;SRF=831;SRP=4.12861;SRR=802;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.3698:17:17:628:0:0:0,-5.11751,-10 0/0:46.3595:16:16:601:0:0:0,-4.81648,-10 0/0:67.4315:23:23:820:0:0:0,-6.92369,-10 0/0:34.3183:12:12:455:0:0:0,-3.61236,-10 0/0:46.3595:16:16:590:0:0:0,-4.81648,-10 0/0:25.2874:9:9:342:0:0:0,-2.70927,-10 0/0:88.5033:30:30:1108:0:0:0,-9.0309,-10 0/0:85.4932:29:29:1074:0:0:0,-8.72987,-10 0/0:49.3698:17:17:636:0:0:0,-5.11751,-10 0/0:10.2359:4:4:150:0:0:0,-1.20412,-10 0/0:22.2771:8:8:281:0:0:0,-2.40824,-10 0/0:16.2565:6:6:227:0:0:0,-1.80618,-10 0/1:99:35:18:670:16:593:-10,0,-10 0/0:85.4932:29:29:1080:0:0:0,-8.72987,-10 0/0:70.4418:24:24:879:0:0:0,-7.22472,-10 0/0:50.9864:26:25:945:1:14:0,-5.01181,-10 0/0:85.4932:29:29:1077:0:0:0,-8.72987,-10 0/0:34.3183:12:12:430:0:0:0,-3.61236,-10 1/1:34.0577:21:0:0:21:752:-10,-6.32163,0 0/0:67.4315:23:23:873:0:0:0,-6.92369,-10 0/0:64.4212:22:22:820:0:0:0,-6.62266,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:34.3183:12:12:453:0:0:0,-3.61236,-10 0/0:58.4007:20:20:760:0:0:0,-6.0206,-10 1/1:40.0783:23:0:0:23:840:-10,-6.92369,0 0/0:64.4212:22:22:800:0:0:0,-6.62266,-10 1/1:34.0577:21:0:0:21:768:-10,-6.32163,0 1/1:9.97531:13:0:0:13:441:-10,-3.91339,0 0/0:49.3698:17:17:618:0:0:0,-5.11751,-10 0/1:99:21:10:373:11:390:-10,0,-10 0/0:19.2668:7:7:253:0:0:0,-2.10721,-10 0/1:0.280737:8:0:0:8:300:-10,-2.40824,0 0/0:61.411:21:21:797:0:0:0,-6.32163,-10 0/0:37.3286:13:13:490:0:0:0,-3.91339,-10 0/0:73.4521:25:25:942:0:0:0,-7.52575,-10 0/0:25.2874:9:9:319:0:0:0,-2.70927,-10 0/0:25.2874:9:9:332:0:0:0,-2.70927,-10 0/0:88.5033:30:30:1093:0:0:0,-9.0309,-10 0/0:49.3698:17:17:646:0:0:0,-5.11751,-10 0/0:49.3698:17:17:624:0:0:0,-5.11751,-10 0/1:99:31:12:434:19:719:-10,0,-10 0/0:31.308:11:11:414:0:0:0,-3.31133,-10 0/0:61.411:21:21:796:0:0:0,-6.32163,-10 0/0:88.5033:30:30:1108:0:0:0,-9.0309,-10 0/0:55.3904:19:19:707:0:0:0,-5.71957,-10 0/0:34.3183:12:12:436:0:0:0,-3.61236,-10 0/0:99:50:50:1844:0:0:0,-10,-10 0/0:82.483:28:28:1058:0:0:0,-8.42884,-10 0/0:37.3286:13:13:489:0:0:0,-3.91339,-10 0/1:99:29:15:555:14:503:-10,0,-10 0/0:37.3286:13:13:494:0:0:0,-3.91339,-10 0/1:99:37:20:703:17:623:-10,0,-10 1/1:15.9959:15:0:0:15:535:-10,-4.51545,0 0/0:16.2565:6:6:227:0:0:0,-1.80618,-10 0/0:99:35:35:1291:0:0:0,-10,-10 0/0:40.3389:14:14:532:0:0:0,-4.21442,-10 0/0:61.411:21:21:763:0:0:0,-6.32163,-10 0/0:10.2359:4:4:147:0:0:0,-1.20412,-10 0/0:40.3389:14:14:527:0:0:0,-4.21442,-10 0/0:58.4007:21:20:734:0:0:0,-6.0206,-10 0/0:85.4932:29:29:1075:0:0:0,-8.72987,-10 0/0:43.3492:15:15:542:0:0:0,-4.51545,-10 0/0:99:44:44:1650:0:0:0,-10,-10 0/0:49.3698:17:17:624:0:0:0,-5.11751,-10 0/0:37.3286:13:13:470:0:0:0,-3.91339,-10 0/0:94.5229:32:32:1158:0:0:0,-9.63296,-10 0/0:85.4932:29:29:1036:0:0:0,-8.72987,-10 0/0:28.2977:10:10:376:0:0:0,-3.0103,-10 0/0:99:48:48:1795:0:0:0,-10,-10 0/0:40.3389:14:14:530:0:0:0,-4.21442,-10 0/0:40.3389:14:14:532:0:0:0,-4.21442,-10 0/0:73.4521:26:25:928:0:0:0,-7.52575,-10 0/0:46.3595:16:16:603:0:0:0,-4.81648,-10 0/0:46.3595:16:16:607:0:0:0,-4.81648,-10 0/0:58.4007:20:20:749:0:0:0,-6.0206,-10 0/0:49.3698:17:17:642:0:0:0,-5.11751,-10 0/0:46.3595:16:16:595:0:0:0,-4.81648,-10 0/0:34.3183:12:12:432:0:0:0,-3.61236,-10 0/0:19.2668:7:7:265:0:0:0,-2.10721,-10 0/0:43.3492:15:15:566:0:0:0,-4.51545,-10 0/0:88.5033:31:30:1085:0:0:0,-9.0309,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:58.4007:20:20:725:0:0:0,-6.0206,-10 0/0:73.4521:25:25:917:0:0:0,-7.52575,-10 0/0:61.411:21:21:795:0:0:0,-6.32163,-10 0/0:19.2668:7:7:266:0:0:0,-2.10721,-10 0/0:55.3904:19:19:720:0:0:0,-5.71957,-10 0/0:28.2977:10:10:375:0:0:0,-3.0103,-10 0/0:34.3183:12:12:453:0:0:0,-3.61236,-10 0/0:43.3492:15:15:570:0:0:0,-4.51545,-10 0/0:73.4521:25:25:906:0:0:0,-7.52575,-10 0/0:43.3492:15:15:546:0:0:0,-4.51545,-10 scaffold_213 1111477 . C G 1536.19 . AB=0.513274;ABP=3.18325;AC=3;AF=0.0164835;AN=182;AO=59;CIGAR=1X;DP=1988;DPB=1988;DPRA=1.57201;EPP=3.93042;EPPR=6.05577;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9948;NS=91;NUMALT=1;ODDS=0.312005;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2129;QR=70618;RO=1928;RPP=131.127;RPPR=4180.93;RUN=1;SAF=32;SAP=3.93042;SAR=27;SRF=937;SRP=6.29454;SRR=991;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.1558:16:16:583:0:0:0,-4.81648,-10 0/0:32.1043:11:11:409:0:0:0,-3.31133,-10 0/0:74.2485:25:25:939:0:0:0,-7.52575,-10 0/0:29.094:10:10:379:0:0:0,-3.0103,-10 0/0:41.1352:14:14:519:0:0:0,-4.21442,-10 0/0:17.0528:6:6:217:0:0:0,-1.80618,-10 0/0:99:38:38:1378:0:0:0,-10,-10 0/1:99:30:20:715:10:380:-10,0,-10 0/0:38.1249:13:13:471:0:0:0,-3.91339,-10 0/0:5.0116:2:2:76:0:0:0,-0.60206,-7.22 0/0:32.1043:11:11:404:0:0:0,-3.31133,-10 0/0:44.1455:15:15:541:0:0:0,-4.51545,-10 0/0:99:34:34:1281:0:0:0,-10,-10 0/0:99:37:37:1373:0:0:0,-10,-10 0/1:99:29:8:281:21:772:-10,0,-10 0/0:62.2073:21:21:775:0:0:0,-6.32163,-10 0/0:62.2073:21:21:744:0:0:0,-6.32163,-10 0/0:17.0528:6:6:226:0:0:0,-1.80618,-10 0/0:86.2894:29:29:1057:0:0:0,-8.72987,-10 0/0:99:44:44:1647:0:0:0,-10,-10 0/0:62.2073:21:21:782:0:0:0,-6.32163,-10 0/0:95.3184:32:32:1194:0:0:0,-9.63296,-10 0/0:14.0425:5:5:190:0:0:0,-1.50515,-10 0/0:56.1867:19:19:713:0:0:0,-5.71957,-10 0/0:38.0086:21:20:712:1:16:0,-3.39941,-10 0/0:80.269:27:27:979:0:0:0,-8.12781,-10 0/0:41.1352:14:14:532:0:0:0,-4.21442,-10 0/0:35.1146:12:12:430:0:0:0,-3.61236,-10 0/0:74.2485:26:25:877:0:0:0,-7.52575,-10 0/0:99:35:35:1303:0:0:0,-10,-10 0/0:20.0631:7:7:257:0:0:0,-2.10721,-10 .:.:.:.:.:.:.:. 0/0:65.2176:22:22:790:0:0:0,-6.62266,-10 0/0:59.197:20:20:714:0:0:0,-6.0206,-10 0/0:65.2176:22:22:826:0:0:0,-6.62266,-10 0/0:20.0631:7:7:242:0:0:0,-2.10721,-10 0/0:17.0528:6:6:212:0:0:0,-1.80618,-10 0/0:68.2279:23:23:840:0:0:0,-6.92369,-10 0/0:41.1352:14:14:524:0:0:0,-4.21442,-10 0/0:32.1043:11:11:397:0:0:0,-3.31133,-10 0/0:92.3092:31:31:1144:0:0:0,-9.33193,-10 0/0:83.2793:28:28:973:0:0:0,-8.42884,-10 0/0:50.1661:17:17:614:0:0:0,-5.11751,-10 0/1:99:54:27:1012:27:961:-10,0,-10 0/0:74.2485:25:25:944:0:0:0,-7.52575,-10 0/0:38.1249:13:13:492:0:0:0,-3.91339,-10 0/0:99:50:50:1862:0:0:0,-10,-10 0/0:99:43:43:1605:0:0:0,-10,-10 0/0:29.094:10:10:362:0:0:0,-3.0103,-10 0/0:99:40:40:1414:0:0:0,-10,-10 0/0:35.1146:12:12:456:0:0:0,-3.61236,-10 0/0:99:56:56:2007:0:0:0,-10,-10 0/0:59.197:20:20:737:0:0:0,-6.0206,-10 0/0:32.1043:11:11:406:0:0:0,-3.31133,-10 0/0:99:46:46:1693:0:0:0,-10,-10 0/0:53.1764:18:18:679:0:0:0,-5.41854,-10 0/0:86.2894:29:29:1087:0:0:0,-8.72987,-10 0/0:23.0734:8:8:303:0:0:0,-2.40824,-10 0/0:71.2382:24:24:898:0:0:0,-7.22472,-10 0/0:47.1558:16:16:600:0:0:0,-4.81648,-10 0/0:74.2485:25:25:913:0:0:0,-7.52575,-10 0/0:56.1867:19:19:641:0:0:0,-5.71957,-10 0/0:99:51:51:1885:0:0:0,-10,-10 0/0:77.2588:26:26:902:0:0:0,-7.82678,-10 0/0:56.1867:19:19:699:0:0:0,-5.71957,-10 0/0:92.3092:31:31:1055:0:0:0,-9.33193,-10 0/0:44.1455:15:15:561:0:0:0,-4.51545,-10 0/0:20.0631:7:7:262:0:0:0,-2.10721,-10 0/0:99:44:44:1597:0:0:0,-10,-10 0/0:20.0631:7:7:240:0:0:0,-2.10721,-10 0/0:89.2995:30:30:1117:0:0:0,-9.0309,-10 0/0:59.197:20:20:724:0:0:0,-6.0206,-10 0/0:89.2995:30:30:1103:0:0:0,-9.0309,-10 0/0:56.1867:19:19:696:0:0:0,-5.71957,-10 0/0:99:41:41:1504:0:0:0,-10,-10 0/0:32.1043:11:11:415:0:0:0,-3.31133,-10 0/0:32.1043:11:11:415:0:0:0,-3.31133,-10 0/0:35.1146:12:12:430:0:0:0,-3.61236,-10 0/0:29.094:10:10:375:0:0:0,-3.0103,-10 0/0:26.0837:9:9:308:0:0:0,-2.70927,-10 0/0:92.3092:31:31:1126:0:0:0,-9.33193,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:86.2894:29:29:1066:0:0:0,-8.72987,-10 0/0:86.2894:29:29:1042:0:0:0,-8.72987,-10 0/0:89.2995:30:30:1092:0:0:0,-9.0309,-10 0/0:17.0528:6:6:210:0:0:0,-1.80618,-10 0/0:56.1867:19:19:677:0:0:0,-5.71957,-10 0/0:53.1764:18:18:674:0:0:0,-5.41854,-10 0/0:11.0322:4:4:150:0:0:0,-1.20412,-10 0/0:47.1558:16:16:607:0:0:0,-4.81648,-10 0/0:47.1558:16:16:599:0:0:0,-4.81648,-10 0/0:32.1043:11:11:417:0:0:0,-3.31133,-10 scaffold_215 173483 . C T 161.338 . AB=0.727273;ABP=7.94546;AC=1;AF=0.00549451;AN=182;AO=8;CIGAR=1X;DP=1038;DPB=1038;DPRA=0.963973;EPP=4.09604;EPPR=4.43546;GTI=0;LEN=1;MEANALT=1;MQM=56;MQMR=59.9592;NS=91;NUMALT=1;ODDS=6.75154;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=281;QR=38267;RO=1030;RPP=12.7819;RPPR=2052.62;RUN=1;SAF=6;SAP=7.35324;SAR=2;SRF=510;SRP=3.22112;SRR=520;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:38.3845:4:4:152:0:0:0,-1.20412,-10 0/0:62.4669:12:12:452:0:0:0,-3.61236,-10 0/0:50.4257:8:8:282:0:0:0,-2.40824,-10 0/0:65.4772:13:13:473:0:0:0,-3.91339,-10 0/0:47.4154:7:7:265:0:0:0,-2.10721,-10 0/0:41.3948:5:5:168:0:0:0,-1.50515,-10 0/0:92.5692:22:22:797:0:0:0,-6.62266,-10 0/0:71.4977:15:15:570:0:0:0,-4.51545,-10 0/0:29.3536:1:1:38:0:0:0,-0.30103,-3.8 0/0:32.3639:2:2:76:0:0:0,-0.60206,-7.22 0/0:41.3948:5:5:179:0:0:0,-1.50515,-10 0/0:32.3639:2:2:76:0:0:0,-0.60206,-7.22 0/0:65.4772:13:13:449:0:0:0,-3.91339,-10 0/0:68.4874:14:14:530:0:0:0,-4.21442,-10 0/0:65.4772:13:13:492:0:0:0,-3.91339,-10 0/0:62.4669:12:12:454:0:0:0,-3.61236,-10 0/0:53.436:9:9:339:0:0:0,-2.70927,-10 0/0:44.4051:6:6:228:0:0:0,-1.80618,-10 0/0:59.4566:11:11:418:0:0:0,-3.31133,-10 0/0:74.508:16:16:608:0:0:0,-4.81648,-10 0/0:53.436:9:9:335:0:0:0,-2.70927,-10 0/0:83.539:19:19:689:0:0:0,-5.71957,-10 0/0:35.3742:3:3:114:0:0:0,-0.90309,-10 0/0:59.4566:11:11:418:0:0:0,-3.31133,-10 0/0:95.5789:23:23:867:0:0:0,-6.92369,-10 0/0:86.5493:20:20:755:0:0:0,-6.0206,-10 0/0:74.508:16:16:598:0:0:0,-4.81648,-10 0/0:53.436:9:9:342:0:0:0,-2.70927,-10 0/0:89.5597:21:21:794:0:0:0,-6.32163,-10 0/0:92.5692:22:22:826:0:0:0,-6.62266,-10 0/0:35.3742:3:3:114:0:0:0,-0.90309,-10 0/0:29.3536:1:1:38:0:0:0,-0.30103,-3.8 0/0:50.4257:8:8:304:0:0:0,-2.40824,-10 0/0:44.4051:6:6:227:0:0:0,-1.80618,-10 0/0:74.508:16:16:606:0:0:0,-4.81648,-10 .:.:.:.:.:.:.:. 0/0:47.4154:7:7:261:0:0:0,-2.10721,-10 0/0:80.5286:18:18:678:0:0:0,-5.41854,-10 0/0:59.4566:11:11:404:0:0:0,-3.31133,-10 0/0:59.4566:11:11:400:0:0:0,-3.31133,-10 0/0:92.5692:22:22:834:0:0:0,-6.62266,-10 0/0:62.4669:12:12:434:0:0:0,-3.61236,-10 0/0:80.5286:18:18:683:0:0:0,-5.41854,-10 0/0:74.508:16:16:602:0:0:0,-4.81648,-10 0/0:59.4566:11:11:418:0:0:0,-3.31133,-10 0/0:50.4257:8:8:304:0:0:0,-2.40824,-10 0/0:99:25:25:949:0:0:0,-7.52575,-10 0/0:68.4874:14:14:532:0:0:0,-4.21442,-10 0/0:56.4463:10:10:366:0:0:0,-3.0103,-10 0/0:95.5789:23:23:835:0:0:0,-6.92369,-10 0/0:38.3845:4:4:152:0:0:0,-1.20412,-10 0/0:80.5286:18:18:673:0:0:0,-5.41854,-10 0/0:56.4463:10:10:337:0:0:0,-3.0103,-10 0/0:29.3536:1:1:38:0:0:0,-0.30103,-3.8 0/0:80.5286:18:18:673:0:0:0,-5.41854,-10 0/0:50.4257:8:8:303:0:0:0,-2.40824,-10 0/0:56.4463:10:10:361:0:0:0,-3.0103,-10 0/0:35.3742:3:3:114:0:0:0,-0.90309,-10 0/0:59.4566:11:11:404:0:0:0,-3.31133,-10 0/0:38.3845:4:4:149:0:0:0,-1.20412,-10 0/0:83.539:19:19:717:0:0:0,-5.71957,-10 0/0:50.4257:8:8:282:0:0:0,-2.40824,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:74.508:16:16:606:0:0:0,-4.81648,-10 0/0:47.4154:7:7:262:0:0:0,-2.10721,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:53.436:9:9:341:0:0:0,-2.70927,-10 0/0:35.3742:3:3:114:0:0:0,-0.90309,-10 0/0:99:31:31:1133:0:0:0,-9.33193,-10 0/0:56.4463:10:10:356:0:0:0,-3.0103,-10 0/0:56.4463:10:10:376:0:0:0,-3.0103,-10 0/0:89.5597:21:21:768:0:0:0,-6.32163,-10 0/1:99:11:3:105:8:281:-10,0,-8.70615 0/0:56.4463:10:10:378:0:0:0,-3.0103,-10 0/0:53.436:9:9:334:0:0:0,-2.70927,-10 0/0:41.3948:5:5:168:0:0:0,-1.50515,-10 0/0:47.4154:7:7:264:0:0:0,-2.10721,-10 0/0:50.4257:8:8:271:0:0:0,-2.40824,-10 0/0:35.3742:3:3:114:0:0:0,-0.90309,-10 0/0:47.4154:7:7:266:0:0:0,-2.10721,-10 0/0:95.5789:23:23:835:0:0:0,-6.92369,-10 0/0:50.4257:8:8:303:0:0:0,-2.40824,-10 0/0:59.4566:11:11:418:0:0:0,-3.31133,-10 0/0:65.4772:13:13:481:0:0:0,-3.91339,-10 0/0:62.4669:12:12:456:0:0:0,-3.61236,-10 0/0:38.3845:4:4:152:0:0:0,-1.20412,-10 0/0:65.4772:13:13:485:0:0:0,-3.91339,-10 0/0:41.3948:5:5:186:0:0:0,-1.50515,-10 0/0:41.3948:5:5:190:0:0:0,-1.50515,-10 0/0:65.4772:13:13:485:0:0:0,-3.91339,-10 0/0:50.4257:8:8:302:0:0:0,-2.40824,-10 0/0:47.4154:7:7:241:0:0:0,-2.10721,-10 scaffold_215 173517 . G C 127.974 . AB=0.285714;ABP=14.1779;AC=2;AF=0.010989;AN=182;AO=8;CIGAR=1X;DP=1018;DPB=1018;DPRA=1.25859;EPP=7.35324;EPPR=4.05089;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9535;NS=91;NUMALT=1;ODDS=8.28591;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=36576;RO=1010;RPP=20.3821;RPPR=2196.2;RUN=1;SAF=2;SAP=7.35324;SAR=6;SRF=494;SRP=4.05089;SRR=516;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:42.0133:3:3:112:0:0:0,-0.90309,-10 0/0:69.106:12:12:422:0:0:0,-3.61236,-10 0/0:57.0648:8:8:302:0:0:0,-2.40824,-10 0/0:72.1163:13:13:458:0:0:0,-3.91339,-10 0/0:54.0545:7:7:265:0:0:0,-2.10721,-10 0/0:48.0339:5:5:190:0:0:0,-1.50515,-10 0/0:99:22:22:809:0:0:0,-6.62266,-10 0/0:78.1369:15:15:565:0:0:0,-4.51545,-10 0/0:35.9927:1:1:38:0:0:0,-0.30103,-3.8 0/0:39.003:2:2:76:0:0:0,-0.60206,-7.22 0/0:48.0339:5:5:189:0:0:0,-1.50515,-10 0/0:39.003:2:2:76:0:0:0,-0.60206,-7.22 0/0:72.1163:13:13:451:0:0:0,-3.91339,-10 0/0:75.1266:14:14:515:0:0:0,-4.21442,-10 0/0:72.1163:13:13:465:0:0:0,-3.91339,-10 0/0:69.106:12:12:430:0:0:0,-3.61236,-10 0/0:60.0751:9:9:340:0:0:0,-2.70927,-10 0/0:51.0442:6:6:227:0:0:0,-1.80618,-10 0/0:66.0957:11:11:413:0:0:0,-3.31133,-10 0/0:81.1472:16:16:595:0:0:0,-4.81648,-10 0/0:57.0648:8:8:304:0:0:0,-2.40824,-10 0/0:87.1676:18:18:665:0:0:0,-5.41854,-10 0/0:42.0133:3:3:112:0:0:0,-0.90309,-10 0/0:66.0957:11:11:415:0:0:0,-3.31133,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:90.1782:19:19:687:0:0:0,-5.71957,-10 0/0:81.1472:16:16:583:0:0:0,-4.81648,-10 0/0:57.0648:8:8:295:0:0:0,-2.40824,-10 0/0:96.1988:21:21:777:0:0:0,-6.32163,-10 0/0:99:22:22:814:0:0:0,-6.62266,-10 0/0:42.0133:3:3:114:0:0:0,-0.90309,-10 0/0:35.9927:1:1:38:0:0:0,-0.30103,-3.8 0/0:57.0648:8:8:283:0:0:0,-2.40824,-10 0/0:51.0442:6:6:215:0:0:0,-1.80618,-10 0/0:78.1369:15:15:563:0:0:0,-4.51545,-10 .:.:.:.:.:.:.:. 0/0:54.0545:7:7:244:0:0:0,-2.10721,-10 0/0:87.1676:18:18:657:0:0:0,-5.41854,-10 0/0:66.0957:11:11:369:0:0:0,-3.31133,-10 0/0:66.0957:11:11:385:0:0:0,-3.31133,-10 0/0:96.1988:21:21:761:0:0:0,-6.32163,-10 0/0:66.0957:11:11:387:0:0:0,-3.31133,-10 0/0:87.1676:18:18:674:0:0:0,-5.41854,-10 0/0:81.1472:16:16:594:0:0:0,-4.81648,-10 0/0:66.0957:11:11:411:0:0:0,-3.31133,-10 0/0:57.0648:8:8:297:0:0:0,-2.40824,-10 0/0:99:22:22:791:0:0:0,-6.62266,-10 0/0:75.1266:14:14:505:0:0:0,-4.21442,-10 0/0:63.0854:10:10:349:0:0:0,-3.0103,-10 0/0:99:22:22:801:0:0:0,-6.62266,-10 0/0:45.0236:4:4:149:0:0:0,-1.20412,-10 0/0:87.1676:18:18:654:0:0:0,-5.41854,-10 0/0:63.0854:10:10:353:0:0:0,-3.0103,-10 0/0:35.9927:1:1:38:0:0:0,-0.30103,-3.8 0/0:87.1676:18:18:657:0:0:0,-5.41854,-10 0/0:57.0648:8:8:274:0:0:0,-2.40824,-10 0/0:63.0854:10:10:358:0:0:0,-3.0103,-10 0/0:42.0133:3:3:99:0:0:0,-0.90309,-9.24 0/0:60.0751:9:9:313:0:0:0,-2.70927,-10 0/0:45.0236:4:4:145:0:0:0,-1.20412,-10 0/0:90.1782:19:19:703:0:0:0,-5.71957,-10 0/0:57.0648:8:8:272:0:0:0,-2.40824,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/1:99:16:11:411:5:190:-10,0,-10 0/0:54.0545:7:7:235:0:0:0,-2.10721,-10 0/0:99:23:23:830:0:0:0,-6.92369,-10 0/0:60.0751:9:9:318:0:0:0,-2.70927,-10 0/0:42.0133:3:3:94:0:0:0,-0.90309,-8.77333 0/0:99:29:29:1000:0:0:0,-8.72987,-10 0/0:63.0854:10:10:364:0:0:0,-3.0103,-10 0/0:60.0751:9:9:314:0:0:0,-2.70927,-10 0/0:96.1988:21:21:748:0:0:0,-6.32163,-10 0/0:66.0957:11:11:378:0:0:0,-3.31133,-10 0/0:60.0751:9:9:338:0:0:0,-2.70927,-10 0/0:60.0751:9:9:338:0:0:0,-2.70927,-10 0/0:48.0339:5:5:183:0:0:0,-1.50515,-10 0/0:54.0545:7:7:264:0:0:0,-2.10721,-10 0/0:57.0648:8:8:234:0:0:0,-2.40824,-10 0/0:42.0133:3:3:114:0:0:0,-0.90309,-10 0/0:54.0545:7:7:262:0:0:0,-2.10721,-10 0/0:99:23:23:828:0:0:0,-6.92369,-10 0/0:57.0648:8:8:295:0:0:0,-2.40824,-10 0/0:66.0957:11:11:409:0:0:0,-3.31133,-10 0/0:72.1163:13:13:454:0:0:0,-3.91339,-10 0/1:40.3493:12:9:317:3:107:-8.71673,0,-10 0/0:45.0236:4:4:150:0:0:0,-1.20412,-10 0/0:72.1163:13:13:469:0:0:0,-3.91339,-10 0/0:48.0339:5:5:190:0:0:0,-1.50515,-10 0/0:48.0339:5:5:190:0:0:0,-1.50515,-10 0/0:72.1163:13:13:480:0:0:0,-3.91339,-10 0/0:57.0648:8:8:278:0:0:0,-2.40824,-10 0/0:54.0545:7:7:219:0:0:0,-2.10721,-10 scaffold_215 642913 . T C 831.467 . AB=0.574074;ABP=5.5839;AC=2;AF=0.0108696;AN=184;AO=32;CIGAR=1X;DP=1496;DPB=1496;DPRA=1.36923;EPP=4.09604;EPPR=4.72493;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9904;NS=92;NUMALT=1;ODDS=0.612383;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1204;QR=52525;RO=1464;RPP=72.4974;RPPR=3182.05;RUN=1;SAF=14;SAP=4.09604;SAR=18;SRF=715;SRP=4.72493;SRR=749;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:51.1432:15:15:540:0:0:0,-4.51545,-10 0/0:21.0402:5:5:181:0:0:0,-1.50515,-10 0/0:33.0814:9:9:295:0:0:0,-2.70927,-10 0/0:45.1226:13:13:463:0:0:0,-3.91339,-10 0/0:30.0711:8:8:304:0:0:0,-2.40824,-10 0/0:45.1226:13:13:485:0:0:0,-3.91339,-10 0/0:93.2865:29:29:1049:0:0:0,-8.72987,-10 0/0:99:32:32:1121:0:0:0,-9.63296,-10 0/0:54.1535:16:16:555:0:0:0,-4.81648,-10 0/0:12.0093:2:2:52:0:0:0,-0.60206,-4.94 0/0:21.0402:5:5:165:0:0:0,-1.50515,-10 0/0:27.0608:7:7:266:0:0:0,-2.10721,-10 0/0:84.2564:26:26:947:0:0:0,-7.82678,-10 0/0:90.2767:28:28:982:0:0:0,-8.42884,-10 0/0:45.1226:13:13:482:0:0:0,-3.91339,-10 0/0:57.1638:17:17:633:0:0:0,-5.11751,-10 0/0:75.2256:23:23:829:0:0:0,-6.92369,-10 0/0:39.102:11:11:407:0:0:0,-3.31133,-10 0/0:69.205:21:21:744:0:0:0,-6.32163,-10 0/0:87.2666:27:27:894:0:0:0,-8.12781,-10 0/0:39.102:11:11:411:0:0:0,-3.31133,-10 0/0:60.1741:18:18:668:0:0:0,-5.41854,-10 0/0:39.102:11:11:366:0:0:0,-3.31133,-10 0/0:36.0917:10:10:351:0:0:0,-3.0103,-10 0/0:63.1844:19:19:662:0:0:0,-5.71957,-10 0/0:63.1844:19:19:695:0:0:0,-5.71957,-10 0/0:60.1741:18:18:635:0:0:0,-5.41854,-10 0/0:39.102:11:11:385:0:0:0,-3.31133,-10 0/0:72.2153:22:22:770:0:0:0,-6.62266,-10 0/0:99:31:31:1078:0:0:0,-9.33193,-10 0/0:27.0608:7:7:264:0:0:0,-2.10721,-10 0/0:24.0505:6:6:200:0:0:0,-1.80618,-10 0/0:60.1741:18:18:655:0:0:0,-5.41854,-10 0/0:27.0608:7:7:265:0:0:0,-2.10721,-10 0/0:60.1741:18:18:631:0:0:0,-5.41854,-10 0/0:45.1226:13:13:491:0:0:0,-3.91339,-10 0/0:33.0814:9:9:321:0:0:0,-2.70927,-10 0/1:99:27:10:331:17:642:-10,0,-10 0/0:45.1226:13:13:486:0:0:0,-3.91339,-10 0/0:63.1844:19:19:720:0:0:0,-5.71957,-10 0/0:63.1844:19:19:705:0:0:0,-5.71957,-10 0/0:57.1638:17:17:573:0:0:0,-5.11751,-10 0/0:33.0814:9:9:316:0:0:0,-2.70927,-10 0/0:81.2462:25:25:934:0:0:0,-7.52575,-10 0/0:66.1947:20:20:739:0:0:0,-6.0206,-10 0/0:39.102:11:11:417:0:0:0,-3.31133,-10 0/0:99:48:48:1786:0:0:0,-10,-10 0/0:57.1638:17:17:637:0:0:0,-5.11751,-10 0/0:1.42489:12:11:366:1:31:-0.566821,0,-10 0/0:96.296:30:30:1079:0:0:0,-9.0309,-10 0/0:39.102:11:11:394:0:0:0,-3.31133,-10 0/1:99:27:13:438:14:531:-10,0,-10 0/0:42.1123:12:12:447:0:0:0,-3.61236,-10 0/0:24.0505:6:6:221:0:0:0,-1.80618,-10 0/0:69.205:21:21:747:0:0:0,-6.32163,-10 0/0:30.0711:8:8:255:0:0:0,-2.40824,-10 0/0:78.2359:24:24:851:0:0:0,-7.22472,-10 0/0:21.0402:5:5:181:0:0:0,-1.50515,-10 0/0:36.0917:10:10:321:0:0:0,-3.0103,-10 0/0:33.0814:9:9:322:0:0:0,-2.70927,-10 0/0:72.2153:22:22:811:0:0:0,-6.62266,-10 0/0:36.0917:10:10:365:0:0:0,-3.0103,-10 0/0:99:37:37:1326:0:0:0,-10,-10 0/0:69.205:21:21:759:0:0:0,-6.32163,-10 0/0:36.0917:10:10:367:0:0:0,-3.0103,-10 0/0:57.1638:17:17:616:0:0:0,-5.11751,-10 0/0:48.1329:14:14:506:0:0:0,-4.21442,-10 0/0:57.1638:17:17:610:0:0:0,-5.11751,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:27.0608:7:7:252:0:0:0,-2.10721,-10 0/0:48.1329:14:14:498:0:0:0,-4.21442,-10 0/0:87.2666:27:27:955:0:0:0,-8.12781,-10 0/0:81.2462:25:25:935:0:0:0,-7.52575,-10 0/0:66.1947:20:20:724:0:0:0,-6.0206,-10 0/0:99:32:32:1127:0:0:0,-9.63296,-10 0/0:39.102:11:11:392:0:0:0,-3.31133,-10 0/0:45.1226:13:13:488:0:0:0,-3.91339,-10 0/0:36.0917:10:10:364:0:0:0,-3.0103,-10 0/0:33.0814:9:9:303:0:0:0,-2.70927,-10 0/0:33.0814:9:9:328:0:0:0,-2.70927,-10 0/0:69.205:21:21:728:0:0:0,-6.32163,-10 0/0:63.1844:19:19:618:0:0:0,-5.71957,-10 0/0:66.1947:20:20:710:0:0:0,-6.0206,-10 0/0:57.1638:17:17:613:0:0:0,-5.11751,-10 0/0:78.2359:24:24:891:0:0:0,-7.22472,-10 0/0:15.0196:3:3:107:0:0:0,-0.90309,-9.98667 0/0:48.1329:14:14:507:0:0:0,-4.21442,-10 0/0:39.102:11:11:379:0:0:0,-3.31133,-10 0/0:12.0093:2:2:74:0:0:0,-0.60206,-7.03 0/0:48.1329:14:14:531:0:0:0,-4.21442,-10 0/0:42.1123:12:12:453:0:0:0,-3.61236,-10 0/0:51.1432:15:15:556:0:0:0,-4.51545,-10 scaffold_215 714010 . A G 67153.3 . AB=0.290323;ABP=14.8483;AC=183;AF=0.994565;AN=184;AO=2247;CIGAR=1X;DP=2277;DPB=2277;DPRA=0;EPP=6.37429;EPPR=6.95112;GTI=0;LEN=1;MEANALT=1.03261;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=5.05068;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=81552;QR=924;RO=27;RPP=4727.22;RPPR=53.2759;RUN=1;SAF=1149;SAP=5.52387;SAR=1098;SRF=9;SRP=9.52472;SRR=18;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:31.1045:21:1:38:20:728:-10,-1.19941,0 1/1:61.175:16:0:0:16:545:-10,-4.81648,0 1/1:79.2368:22:0:0:22:810:-10,-6.62266,0 1/1:37.0926:8:0:0:8:299:-10,-2.40824,0 1/1:64.1853:17:0:0:17:610:-10,-5.11751,0 1/1:43.1132:10:0:0:10:355:-10,-3.0103,0 1/1:99:49:0:0:49:1789:-10,-10,0 1/1:99:37:0:0:37:1347:-10,-10,0 1/1:76.2265:21:0:0:21:751:-10,-6.32163,0 1/1:25.0514:4:0:0:4:143:-10,-1.20412,0 1/1:52.1441:13:0:0:13:467:-10,-3.91339,0 1/1:34.0823:7:0:0:7:254:-10,-2.10721,0 1/1:99:52:0:0:51:1861:-10,-10,0 1/1:99:46:0:0:46:1685:-10,-10,0 1/1:99:44:0:0:44:1610:-10,-10,0 1/1:99:35:0:0:35:1271:-10,-10,0 1/1:99:33:0:0:33:1204:-10,-9.93399,0 1/1:61.175:16:0:0:16:568:-10,-4.81648,0 1/1:64.1853:17:0:0:17:565:-10,-5.11751,0 1/1:99:40:0:0:40:1492:-10,-10,0 1/1:76.2265:21:0:0:21:781:-10,-6.32163,0 1/1:99:37:0:0:37:1372:-10,-10,0 1/1:64.1853:17:0:0:17:609:-10,-5.11751,0 1/1:76.2265:21:0:0:21:751:-10,-6.32163,0 1/1:97.2951:28:0:0:28:1053:-10,-8.42884,0 1/1:82.2472:23:0:0:23:811:-10,-6.92369,0 1/1:97.2951:28:0:0:28:1033:-10,-8.42884,0 1/1:49.1338:12:0:0:12:435:-10,-3.61236,0 1/1:94.2865:27:0:0:27:983:-10,-8.12781,0 1/1:99:46:0:0:46:1647:-10,-10,0 1/1:25.0514:4:0:0:4:152:-10,-1.20412,0 1/1:22.0411:3:0:0:3:108:-10,-0.90309,0 1/1:55.1544:14:0:0:14:492:-10,-4.21442,0 1/1:61.175:16:0:0:16:589:-10,-4.81648,0 1/1:70.2059:19:0:0:19:680:-10,-5.71957,0 1/1:37.0926:8:0:0:8:303:-10,-2.40824,0 1/1:40.1029:9:0:0:9:314:-10,-2.70927,0 1/1:99:43:0:0:43:1508:-10,-10,0 1/1:99:29:0:0:29:1039:-10,-8.72987,0 1/1:82.2472:23:0:0:23:867:-10,-6.92369,0 1/1:84.233:38:1:16:37:1322:-10,-8.25936,0 1/1:85.2572:24:0:0:24:882:-10,-7.22472,0 1/1:91.2785:26:0:0:26:970:-10,-7.82678,0 1/1:99:39:0:0:39:1431:-10,-10,0 1/1:99:32:0:0:32:1140:-10,-9.63296,0 1/1:70.2059:19:0:0:19:680:-10,-5.71957,0 1/1:99:50:0:0:50:1792:-10,-10,0 1/1:99:34:0:0:34:1252:-10,-10,0 1/1:40.1029:9:0:0:9:331:-10,-2.70927,0 1/1:99:50:0:0:50:1846:-10,-10,0 1/1:99:33:0:0:33:1207:-10,-9.93399,0 1/1:99:43:0:0:42:1519:-10,-10,0 1/1:64.1853:17:0:0:17:609:-10,-5.11751,0 1/1:25.0514:4:0:0:4:149:-10,-1.20412,0 1/1:99:38:0:0:38:1299:-10,-10,0 1/1:79.2368:22:0:0:22:815:-10,-6.62266,0 1/1:82.2472:23:0:0:23:832:-10,-6.92369,0 1/1:52.1441:13:0:0:13:459:-10,-3.91339,0 1/1:94.2865:27:0:0:27:1005:-10,-8.12781,0 1/1:49.1338:12:0:0:12:431:-10,-3.61236,0 1/1:99:33:0:0:33:1188:-10,-9.93399,0 1/1:99:29:0:0:29:1056:-10,-8.72987,0 1/1:99:44:0:0:44:1560:-10,-10,0 1/1:87.3234:35:1:14:34:1240:-10,-7.59198,0 1/1:49.1338:12:0:0:12:453:-10,-3.61236,0 1/1:99:44:0:0:44:1596:-10,-10,0 1/1:99:30:0:0:30:1065:-10,-9.0309,0 1/1:61.175:16:0:0:16:598:-10,-4.81648,0 1/1:36.2303:34:2:52:32:1167:-10,-2.54606,0 1/1:52.1441:13:0:0:13:490:-10,-3.91339,0 1/1:97.2951:28:0:0:28:968:-10,-8.42884,0 0/1:99:31:22:804:9:333:-10,0,-10 1/1:99:29:0:0:29:1055:-10,-8.72987,0 1/1:73.2162:20:0:0:20:732:-10,-6.0206,0 1/1:99:39:0:0:39:1423:-10,-10,0 1/1:58.1647:15:0:0:15:542:-10,-4.51545,0 1/1:79.2368:22:0:0:22:802:-10,-6.62266,0 1/1:64.1853:17:0:0:17:628:-10,-5.11751,0 1/1:22.0411:4:0:0:3:111:-10,-0.90309,0 1/1:64.1853:17:0:0:17:644:-10,-5.11751,0 1/1:99:39:0:0:39:1416:-10,-10,0 1/1:99:32:0:0:32:1162:-10,-9.63296,0 1/1:85.2572:24:0:0:24:874:-10,-7.22472,0 1/1:76.2265:21:0:0:21:730:-10,-6.32163,0 1/1:88.2673:25:0:0:25:921:-10,-7.52575,0 1/1:52.1441:13:0:0:13:472:-10,-3.91339,0 1/1:88.2673:25:0:0:25:932:-10,-7.52575,0 1/1:73.2162:20:0:0:20:748:-10,-6.0206,0 1/1:37.0926:8:0:0:8:301:-10,-2.40824,0 1/1:94.2865:27:0:0:27:991:-10,-8.12781,0 1/1:85.2572:24:0:0:24:850:-10,-7.22472,0 1/1:67.1956:18:0:0:18:652:-10,-5.41854,0 scaffold_215 767197 . G T 1420.16 . AB=0.618557;ABP=14.8527;AC=8;AF=0.0434783;AN=184;AO=60;CIGAR=2X;DP=1228;DPB=1228.5;DPRA=0.900531;EPP=133.299;EPPR=2362.04;GTI=3;LEN=1;MEANALT=1;MQM=59.9333;MQMR=60;NS=92;NUMALT=1;ODDS=1.74064;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=1;QA=2137;QR=42579;RO=1165;RPP=3.58936;RPPR=6.78475;RUN=1;SAF=28;SAP=3.58936;SAR=32;SRF=585;SRP=3.0569;SRR=580;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:30.2567:6:6:227:0:0:0,-1.80618,-10 0|0:27.2464:5:5:185:0:0:0,-1.50515,-10 0|0:54.3391:14:14:504:0:0:0,-4.21442,-10 0|0:57.3494:15:15:557:0:0:0,-4.51545,-10 0|1:99:15:10:364:5:168:-10,0,-10 0|0:18.2155:2:2:68:0:0:0,-0.60206,-6.46 0|0:99:32:32:1181:0:0:0,-9.63296,-10 0|0:69.3906:19:19:712:0:0:0,-5.71957,-10 0|1:0.136502:11:0:0:11:390:-10,-3.31133,0 0|0:15.2052:1:1:37:0:0:0,-0.30103,-3.7 0|0:36.2773:8:8:299:0:0:0,-2.40824,-10 0|0:27.2464:5:5:174:0:0:0,-1.50515,-10 0|0:93.4724:27:27:967:0:0:0,-8.12781,-10 0|0:87.4523:25:25:920:0:0:0,-7.52575,-10 0|0:39.2876:9:9:340:0:0:0,-2.70927,-10 0|0:90.4624:26:26:934:0:0:0,-7.82678,-10 0|1:99:14:5:189:9:288:-10,0,-10 0|0:30.2567:6:6:222:0:0:0,-1.80618,-10 0|0:63.37:17:17:636:0:0:0,-5.11751,-10 0|0:96.4821:28:28:1042:0:0:0,-8.42884,-10 0|0:48.3185:12:12:445:0:0:0,-3.61236,-10 0|0:54.3391:14:14:523:0:0:0,-4.21442,-10 0|0:21.2258:3:3:112:0:0:0,-0.90309,-10 0|1:99:8:4:147:4:147:-10,0,-10 0|0:60.3597:16:16:602:0:0:0,-4.81648,-10 0|0:57.3494:15:15:544:0:0:0,-4.51545,-10 0|0:39.2876:9:9:316:0:0:0,-2.70927,-10 0|0:36.2773:8:8:302:0:0:0,-2.40824,-10 0|0:93.4724:27:27:1012:0:0:0,-8.12781,-10 0|0:93.4724:27:27:920:0:0:0,-8.12781,-10 0|0:18.2155:2:2:73:0:0:0,-0.60206,-6.935 0|0:42.2979:10:10:371:0:0:0,-3.0103,-10 0|0:42.2979:10:10:342:0:0:0,-3.0103,-10 0|0:33.267:7:7:262:0:0:0,-2.10721,-10 0|0:48.3185:12:12:443:0:0:0,-3.61236,-10 0|0:18.2155:2:2:76:0:0:0,-0.60206,-7.22 0|0:45.3082:11:11:402:0:0:0,-3.31133,-10 0|0:54.3391:14:14:521:0:0:0,-4.21442,-10 0|0:45.3082:11:11:407:0:0:0,-3.31133,-10 0|0:30.2567:6:6:223:0:0:0,-1.80618,-10 0|0:81.4318:23:23:843:0:0:0,-6.92369,-10 0|0:51.3288:13:13:476:0:0:0,-3.91339,-10 0|0:30.2567:6:6:207:0:0:0,-1.80618,-10 0|0:45.3082:11:11:390:0:0:0,-3.31133,-10 0|0:63.37:17:17:615:0:0:0,-5.11751,-10 0|0:36.2773:8:8:276:0:0:0,-2.40824,-10 0|0:99:46:46:1682:0:0:0,-10,-10 0|0:48.3185:12:12:448:0:0:0,-3.61236,-10 0|0:27.2464:5:5:187:0:0:0,-1.50515,-10 0|0:72.4009:22:20:726:0:0:0,-6.0206,-10 0|0:30.2567:6:6:218:0:0:0,-1.80618,-10 0|0:87.4523:25:25:907:0:0:0,-7.52575,-10 0|0:30.2567:6:6:210:0:0:0,-1.80618,-10 0|0:42.2979:10:10:361:0:0:0,-3.0103,-10 0|0:99:29:29:1074:0:0:0,-8.72987,-10 0|0:36.2773:8:8:300:0:0:0,-2.40824,-10 0|1:99:16:11:416:5:187:-10,0,-10 0|0:33.267:7:7:252:0:0:0,-2.10721,-10 0|0:57.3494:15:15:545:0:0:0,-4.51545,-10 0|0:42.2979:10:10:345:0:0:0,-3.0103,-10 0|1:0.573809:13:0:0:13:492:-10,-3.91339,0 0|0:39.2876:9:9:319:0:0:0,-2.70927,-10 0|0:84.442:24:24:899:0:0:0,-7.22472,-10 0|1:99:15:7:263:8:275:-10,0,-10 0|0:57.3494:15:15:519:0:0:0,-4.51545,-10 0|0:45.3082:11:11:405:0:0:0,-3.31133,-10 0|0:63.37:17:17:635:0:0:0,-5.11751,-10 0|1:0.00210019:5:0:0:5:190:-10,-1.50515,0 0|0:99:33:33:1188:0:0:0,-9.93399,-10 0|0:45.3082:11:11:397:0:0:0,-3.31133,-10 0|0:57.3494:15:15:547:0:0:0,-4.51545,-10 0|0:87.4523:25:25:929:0:0:0,-7.52575,-10 0|0:60.3597:16:16:605:0:0:0,-4.81648,-10 0|0:42.2979:10:10:378:0:0:0,-3.0103,-10 0|0:54.3391:14:14:511:0:0:0,-4.21442,-10 0|0:54.3391:14:14:505:0:0:0,-4.21442,-10 0|0:24.2361:4:4:139:0:0:0,-1.20412,-10 0|0:36.2773:8:8:295:0:0:0,-2.40824,-10 0|0:18.2155:2:2:60:0:0:0,-0.60206,-5.7 0|0:39.2876:9:9:332:0:0:0,-2.70927,-10 0|0:90.4624:26:26:933:0:0:0,-7.82678,-10 0|0:66.3803:19:18:640:0:0:0,-5.41854,-10 0|0:45.3082:11:11:406:0:0:0,-3.31133,-10 0|0:87.4523:25:25:893:0:0:0,-7.52575,-10 0|0:60.3597:16:16:595:0:0:0,-4.81648,-10 0|0:24.2361:4:4:152:0:0:0,-1.20412,-10 0|0:24.2361:4:4:148:0:0:0,-1.20412,-10 0|0:42.2979:10:10:373:0:0:0,-3.0103,-10 0|0:18.2155:2:2:65:0:0:0,-0.60206,-6.175 0|0:66.3803:18:18:663:0:0:0,-5.41854,-10 0|0:45.3082:11:11:413:0:0:0,-3.31133,-10 0|0:36.2773:8:8:293:0:0:0,-2.40824,-10 scaffold_215 767198 . C T 1420.16 . AB=0.618557;ABP=14.8527;AC=8;AF=0.0434783;AN=184;AO=60;CIGAR=2X;DP=1228;DPB=1228.5;DPRA=0.900531;EPP=133.299;EPPR=2362.04;GTI=3;LEN=1;MEANALT=1;MQM=59.9333;MQMR=60;NS=92;NUMALT=1;ODDS=1.74064;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=1;QA=2137;QR=42579;RO=1165;RPP=3.58936;RPPR=6.78475;RUN=1;SAF=28;SAP=3.58936;SAR=32;SRF=585;SRP=3.0569;SRR=580;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:30.2567:6:6:227:0:0:0,-1.80618,-10 0|0:27.2464:5:5:185:0:0:0,-1.50515,-10 0|0:54.3391:14:14:504:0:0:0,-4.21442,-10 0|0:57.3494:15:15:557:0:0:0,-4.51545,-10 0|1:99:15:10:364:5:168:-10,0,-10 0|0:18.2155:2:2:68:0:0:0,-0.60206,-6.46 0|0:99:32:32:1181:0:0:0,-9.63296,-10 0|0:69.3906:19:19:712:0:0:0,-5.71957,-10 0|1:0.136502:11:0:0:11:390:-10,-3.31133,0 0|0:15.2052:1:1:37:0:0:0,-0.30103,-3.7 0|0:36.2773:8:8:299:0:0:0,-2.40824,-10 0|0:27.2464:5:5:174:0:0:0,-1.50515,-10 0|0:93.4724:27:27:967:0:0:0,-8.12781,-10 0|0:87.4523:25:25:920:0:0:0,-7.52575,-10 0|0:39.2876:9:9:340:0:0:0,-2.70927,-10 0|0:90.4624:26:26:934:0:0:0,-7.82678,-10 0|1:99:14:5:189:9:288:-10,0,-10 0|0:30.2567:6:6:222:0:0:0,-1.80618,-10 0|0:63.37:17:17:636:0:0:0,-5.11751,-10 0|0:96.4821:28:28:1042:0:0:0,-8.42884,-10 0|0:48.3185:12:12:445:0:0:0,-3.61236,-10 0|0:54.3391:14:14:523:0:0:0,-4.21442,-10 0|0:21.2258:3:3:112:0:0:0,-0.90309,-10 0|1:99:8:4:147:4:147:-10,0,-10 0|0:60.3597:16:16:602:0:0:0,-4.81648,-10 0|0:57.3494:15:15:544:0:0:0,-4.51545,-10 0|0:39.2876:9:9:316:0:0:0,-2.70927,-10 0|0:36.2773:8:8:302:0:0:0,-2.40824,-10 0|0:93.4724:27:27:1012:0:0:0,-8.12781,-10 0|0:93.4724:27:27:920:0:0:0,-8.12781,-10 0|0:18.2155:2:2:73:0:0:0,-0.60206,-6.935 0|0:42.2979:10:10:371:0:0:0,-3.0103,-10 0|0:42.2979:10:10:342:0:0:0,-3.0103,-10 0|0:33.267:7:7:262:0:0:0,-2.10721,-10 0|0:48.3185:12:12:443:0:0:0,-3.61236,-10 0|0:18.2155:2:2:76:0:0:0,-0.60206,-7.22 0|0:45.3082:11:11:402:0:0:0,-3.31133,-10 0|0:54.3391:14:14:521:0:0:0,-4.21442,-10 0|0:45.3082:11:11:407:0:0:0,-3.31133,-10 0|0:30.2567:6:6:223:0:0:0,-1.80618,-10 0|0:81.4318:23:23:843:0:0:0,-6.92369,-10 0|0:51.3288:13:13:476:0:0:0,-3.91339,-10 0|0:30.2567:6:6:207:0:0:0,-1.80618,-10 0|0:45.3082:11:11:390:0:0:0,-3.31133,-10 0|0:63.37:17:17:615:0:0:0,-5.11751,-10 0|0:36.2773:8:8:276:0:0:0,-2.40824,-10 0|0:99:46:46:1682:0:0:0,-10,-10 0|0:48.3185:12:12:448:0:0:0,-3.61236,-10 0|0:27.2464:5:5:187:0:0:0,-1.50515,-10 0|0:72.4009:22:20:726:0:0:0,-6.0206,-10 0|0:30.2567:6:6:218:0:0:0,-1.80618,-10 0|0:87.4523:25:25:907:0:0:0,-7.52575,-10 0|0:30.2567:6:6:210:0:0:0,-1.80618,-10 0|0:42.2979:10:10:361:0:0:0,-3.0103,-10 0|0:99:29:29:1074:0:0:0,-8.72987,-10 0|0:36.2773:8:8:300:0:0:0,-2.40824,-10 0|1:99:16:11:416:5:187:-10,0,-10 0|0:33.267:7:7:252:0:0:0,-2.10721,-10 0|0:57.3494:15:15:545:0:0:0,-4.51545,-10 0|0:42.2979:10:10:345:0:0:0,-3.0103,-10 0|1:0.573809:13:0:0:13:492:-10,-3.91339,0 0|0:39.2876:9:9:319:0:0:0,-2.70927,-10 0|0:84.442:24:24:899:0:0:0,-7.22472,-10 0|1:99:15:7:263:8:275:-10,0,-10 0|0:57.3494:15:15:519:0:0:0,-4.51545,-10 0|0:45.3082:11:11:405:0:0:0,-3.31133,-10 0|0:63.37:17:17:635:0:0:0,-5.11751,-10 0|1:0.00210019:5:0:0:5:190:-10,-1.50515,0 0|0:99:33:33:1188:0:0:0,-9.93399,-10 0|0:45.3082:11:11:397:0:0:0,-3.31133,-10 0|0:57.3494:15:15:547:0:0:0,-4.51545,-10 0|0:87.4523:25:25:929:0:0:0,-7.52575,-10 0|0:60.3597:16:16:605:0:0:0,-4.81648,-10 0|0:42.2979:10:10:378:0:0:0,-3.0103,-10 0|0:54.3391:14:14:511:0:0:0,-4.21442,-10 0|0:54.3391:14:14:505:0:0:0,-4.21442,-10 0|0:24.2361:4:4:139:0:0:0,-1.20412,-10 0|0:36.2773:8:8:295:0:0:0,-2.40824,-10 0|0:18.2155:2:2:60:0:0:0,-0.60206,-5.7 0|0:39.2876:9:9:332:0:0:0,-2.70927,-10 0|0:90.4624:26:26:933:0:0:0,-7.82678,-10 0|0:66.3803:19:18:640:0:0:0,-5.41854,-10 0|0:45.3082:11:11:406:0:0:0,-3.31133,-10 0|0:87.4523:25:25:893:0:0:0,-7.52575,-10 0|0:60.3597:16:16:595:0:0:0,-4.81648,-10 0|0:24.2361:4:4:152:0:0:0,-1.20412,-10 0|0:24.2361:4:4:148:0:0:0,-1.20412,-10 0|0:42.2979:10:10:373:0:0:0,-3.0103,-10 0|0:18.2155:2:2:65:0:0:0,-0.60206,-6.175 0|0:66.3803:18:18:663:0:0:0,-5.41854,-10 0|0:45.3082:11:11:413:0:0:0,-3.31133,-10 0|0:36.2773:8:8:293:0:0:0,-2.40824,-10 scaffold_215 875220 . C G 735.532 . AB=0.47619;ABP=3.32051;AC=3;AF=0.0164835;AN=182;AO=31;CIGAR=1X;DP=1516;DPB=1516;DPRA=1.45408;EPP=23.254;EPPR=7.11782;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9845;NS=91;NUMALT=1;ODDS=5.8853;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1105;QR=54517;RO=1485;RPP=61.9202;RPPR=3056.27;RUN=1;SAF=23;SAP=18.771;SAR=8;SRF=696;SRP=15.6575;SRR=789;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.7093:14:14:514:0:0:0,-4.21442,-10 0/0:37.6269:6:6:225:0:0:0,-1.80618,-10 0/0:61.7093:14:14:516:0:0:0,-4.21442,-10 0/0:55.6887:12:12:448:0:0:0,-3.61236,-10 0/1:99:15:9:336:6:226:-10,0,-10 0/0:55.6887:12:12:437:0:0:0,-3.61236,-10 0/0:94.8222:25:25:913:0:0:0,-7.52575,-10 0/0:76.7608:19:19:710:0:0:0,-5.71957,-10 0/0:67.7299:16:16:590:0:0:0,-4.81648,-10 .:.:.:.:.:.:.:. 0/0:49.6681:10:10:351:0:0:0,-3.0103,-10 0/0:25.5857:2:2:72:0:0:0,-0.60206,-6.84 0/0:99:31:31:1126:0:0:0,-9.33193,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:79.7711:20:20:757:0:0:0,-6.0206,-10 0/0:94.8222:25:25:938:0:0:0,-7.52575,-10 0/0:46.6578:9:9:328:0:0:0,-2.70927,-10 0/0:40.6372:7:7:264:0:0:0,-2.10721,-10 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:88.8016:23:23:850:0:0:0,-6.92369,-10 0/0:82.7814:21:21:781:0:0:0,-6.32163,-10 0/0:37.6269:6:6:225:0:0:0,-1.80618,-10 0/0:64.7196:15:15:516:0:0:0,-4.51545,-10 0/0:67.7299:16:16:594:0:0:0,-4.81648,-10 0/0:61.7093:14:14:520:0:0:0,-4.21442,-10 0/0:67.7299:16:16:591:0:0:0,-4.81648,-10 0/0:52.6784:11:11:403:0:0:0,-3.31133,-10 0/0:82.7814:21:21:768:0:0:0,-6.32163,-10 0/0:88.8016:23:23:864:0:0:0,-6.92369,-10 0/0:46.6578:9:9:333:0:0:0,-2.70927,-10 0/0:34.6166:5:5:190:0:0:0,-1.50515,-10 0/0:58.699:13:13:463:0:0:0,-3.91339,-10 0/0:52.6784:11:11:410:0:0:0,-3.31133,-10 0/0:85.7915:22:22:805:0:0:0,-6.62266,-10 0/0:52.6784:11:11:412:0:0:0,-3.31133,-10 0/0:61.7093:14:14:494:0:0:0,-4.21442,-10 0/0:91.8114:24:24:883:0:0:0,-7.22472,-10 0/0:67.7299:16:16:579:0:0:0,-4.81648,-10 0/0:43.6475:8:8:287:0:0:0,-2.40824,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:58.699:13:13:477:0:0:0,-3.91339,-10 0/0:52.6784:11:11:413:0:0:0,-3.31133,-10 0/0:79.7711:20:20:738:0:0:0,-6.0206,-10 0/0:85.7915:22:22:796:0:0:0,-6.62266,-10 0/0:46.6578:9:9:337:0:0:0,-2.70927,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:58.699:13:13:490:0:0:0,-3.91339,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:55.6887:12:12:444:0:0:0,-3.61236,-10 0/0:92.0104:32:31:1124:1:15:0,-6.62781,-10 0/0:49.6681:10:10:363:0:0:0,-3.0103,-10 0/0:52.6784:11:11:417:0:0:0,-3.31133,-10 0/0:99:30:30:1100:0:0:0,-9.0309,-10 0/0:37.6269:6:6:223:0:0:0,-1.80618,-10 0/0:64.7196:15:15:546:0:0:0,-4.51545,-10 0/0:61.7093:14:14:508:0:0:0,-4.21442,-10 0/0:49.6681:10:10:376:0:0:0,-3.0103,-10 0/0:52.6784:11:11:418:0:0:0,-3.31133,-10 0/1:99:34:15:550:19:674:-10,0,-10 0/0:70.7402:17:17:638:0:0:0,-5.11751,-10 0/0:73.7505:18:18:638:0:0:0,-5.41854,-10 0/1:99:14:9:342:5:190:-10,0,-10 0/0:61.7093:14:14:507:0:0:0,-4.21442,-10 0/0:99:27:27:1001:0:0:0,-8.12781,-10 0/0:52.6784:11:11:404:0:0:0,-3.31133,-10 0/0:49.6681:10:10:316:0:0:0,-3.0103,-10 0/0:99:28:28:1055:0:0:0,-8.42884,-10 0/0:49.6681:10:10:367:0:0:0,-3.0103,-10 0/0:55.6887:12:12:428:0:0:0,-3.61236,-10 0/0:85.7915:22:22:802:0:0:0,-6.62266,-10 0/0:73.7505:18:18:672:0:0:0,-5.41854,-10 0/0:34.6166:5:5:152:0:0:0,-1.50515,-10 0/0:94.8222:25:25:865:0:0:0,-7.52575,-10 0/0:61.7093:14:14:527:0:0:0,-4.21442,-10 0/0:58.699:13:13:491:0:0:0,-3.91339,-10 0/0:55.6887:12:12:446:0:0:0,-3.61236,-10 0/0:28.596:3:3:114:0:0:0,-0.90309,-10 0/0:40.6372:7:7:266:0:0:0,-2.10721,-10 0/0:99:28:28:1021:0:0:0,-8.42884,-10 0/0:94.8222:25:25:887:0:0:0,-7.52575,-10 0/0:73.7505:18:18:659:0:0:0,-5.41854,-10 0/0:79.7711:20:20:731:0:0:0,-6.0206,-10 0/0:73.7505:18:18:667:0:0:0,-5.41854,-10 0/0:37.6269:6:6:227:0:0:0,-1.80618,-10 0/0:73.7505:18:18:682:0:0:0,-5.41854,-10 0/0:61.7093:14:14:508:0:0:0,-4.21442,-10 0/0:40.6372:7:7:266:0:0:0,-2.10721,-10 0/0:94.8222:25:25:914:0:0:0,-7.52575,-10 0/0:76.7608:19:19:712:0:0:0,-5.71957,-10 0/0:70.7402:17:17:616:0:0:0,-5.11751,-10 scaffold_215 894159 . C A 693.152 . AB=0.557692;ABP=4.51363;AC=3;AF=0.0163043;AN=184;AO=30;CIGAR=1X;DP=2019;DPB=2019;DPRA=0.895876;EPP=5.61607;EPPR=6.81065;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9578;NS=92;NUMALT=1;ODDS=9.38311;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1082;QR=72523;RO=1989;RPP=68.1545;RPPR=4322.07;RUN=1;SAF=18;SAP=5.61607;SAR=12;SRF=1024;SRP=6.81065;SRR=965;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:89.7571:19:19:692:0:0:0,-5.71957,-10 0/0:62.6652:10:10:366:0:0:0,-3.0103,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:74.7063:14:14:506:0:0:0,-4.21442,-10 0/0:71.6961:13:13:455:0:0:0,-3.91339,-10 0/0:71.6961:13:13:469:0:0:0,-3.91339,-10 0/0:99:41:41:1470:0:0:0,-10,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:83.7373:17:17:632:0:0:0,-5.11751,-10 0/1:1.42707e-06:4:0:0:4:149:-10,-1.20412,0 0/1:0.000365345:12:0:0:12:452:-10,-3.61236,0 0/0:59.6549:9:9:327:0:0:0,-2.70927,-10 0/0:99:25:25:875:0:0:0,-7.52575,-10 0/1:99:36:23:848:13:465:-10,0,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:99:34:34:1267:0:0:0,-10,-10 0/0:99:25:25:884:0:0:0,-7.52575,-10 0/0:56.6446:8:8:295:0:0:0,-2.40824,-10 0/0:89.7571:19:19:695:0:0:0,-5.71957,-10 0/0:99:39:39:1443:0:0:0,-10,-10 0/0:89.7571:19:19:702:0:0:0,-5.71957,-10 0/0:99:29:29:1035:0:0:0,-8.72987,-10 0/0:74.7063:14:14:523:0:0:0,-4.21442,-10 0/0:99:29:29:1088:0:0:0,-8.72987,-10 0/0:80.727:16:16:605:0:0:0,-4.81648,-10 0/0:99:35:35:1252:0:0:0,-10,-10 0/0:86.7472:18:18:656:0:0:0,-5.41854,-10 0/0:82.946:27:26:955:1:16:0,-5.09645,-10 0/0:89.7571:19:19:685:0:0:0,-5.71957,-10 0/0:99:29:29:1045:0:0:0,-8.72987,-10 0/0:44.6034:4:4:152:0:0:0,-1.20412,-10 0/0:47.6137:5:5:186:0:0:0,-1.50515,-10 0/0:83.7373:17:17:628:0:0:0,-5.11751,-10 0/0:68.6858:12:12:418:0:0:0,-3.61236,-10 0/0:99:23:23:857:0:0:0,-6.92369,-10 0/0:74.7063:14:14:515:0:0:0,-4.21442,-10 0/0:83.7373:17:17:640:0:0:0,-5.11751,-10 0/0:99:23:23:832:0:0:0,-6.92369,-10 0/0:98.7825:22:22:809:0:0:0,-6.62266,-10 0/0:59.6549:9:9:323:0:0:0,-2.70927,-10 0/0:99:28:28:1061:0:0:0,-8.42884,-10 0/0:74.7063:14:14:530:0:0:0,-4.21442,-10 0/0:89.7571:19:19:718:0:0:0,-5.71957,-10 0/0:99:35:35:1262:0:0:0,-10,-10 0/0:99:25:25:922:0:0:0,-7.52575,-10 0/0:83.7373:17:17:630:0:0:0,-5.11751,-10 0/0:99:53:53:1889:0:0:0,-10,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:83.7373:17:17:635:0:0:0,-5.11751,-10 0/0:99:47:47:1732:0:0:0,-10,-10 0/0:92.7666:20:20:730:0:0:0,-6.0206,-10 0/0:99:38:38:1391:0:0:0,-10,-10 0/0:71.6961:13:13:467:0:0:0,-3.91339,-10 0/0:77.7166:15:15:506:0:0:0,-4.51545,-10 0/0:99:44:44:1549:0:0:0,-10,-10 0/0:98.7825:22:22:829:0:0:0,-6.62266,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:56.6446:8:8:301:0:0:0,-2.40824,-10 0/0:99:24:24:816:0:0:0,-7.22472,-10 0/0:77.7166:15:15:524:0:0:0,-4.51545,-10 0/0:99:31:31:1166:0:0:0,-9.33193,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:99:46:46:1650:0:0:0,-10,-10 0/0:95.7753:21:21:718:0:0:0,-6.32163,-10 0/0:77.7166:15:15:551:0:0:0,-4.51545,-10 0/0:99:35:35:1300:0:0:0,-10,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:83.7373:17:17:601:0:0:0,-5.11751,-10 0/0:99:52:52:1919:0:0:0,-10,-10 0/0:77.7166:15:15:559:0:0:0,-4.51545,-10 0/0:77.7166:15:15:524:0:0:0,-4.51545,-10 0/0:92.7666:20:20:734:0:0:0,-6.0206,-10 0/0:99:32:32:1143:0:0:0,-9.63296,-10 0/0:83.7373:17:17:627:0:0:0,-5.11751,-10 0/0:99:34:34:1243:0:0:0,-10,-10 0/0:71.6961:13:13:483:0:0:0,-3.91339,-10 0/0:86.7472:18:18:669:0:0:0,-5.41854,-10 0/0:56.6446:8:8:289:0:0:0,-2.40824,-10 0/0:53.6343:7:7:241:0:0:0,-2.10721,-10 0/0:62.6652:10:10:375:0:0:0,-3.0103,-10 0/0:99:41:41:1470:0:0:0,-10,-10 0/0:99:36:36:1258:0:0:0,-10,-10 0/0:92.7666:20:20:734:0:0:0,-6.0206,-10 0/0:99:24:24:873:0:0:0,-7.22472,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:68.6858:12:12:423:0:0:0,-3.61236,-10 0/0:56.6446:8:8:304:0:0:0,-2.40824,-10 0/0:86.7472:18:18:673:0:0:0,-5.41854,-10 0/0:53.6343:7:7:261:0:0:0,-2.10721,-10 0/0:83.7373:17:17:617:0:0:0,-5.11751,-10 0/0:92.7666:20:20:744:0:0:0,-6.0206,-10 0/0:89.7571:19:19:697:0:0:0,-5.71957,-10 scaffold_215 998490 . C T 348.832 . AB=0.551724;ABP=3.68421;AC=3;AF=0.0163043;AN=184;AO=19;CIGAR=1X;DP=1181;DPB=1181;DPRA=1.11162;EPP=3.12459;EPPR=3.02713;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=6.59393;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=667;QR=42330;RO=1161;RPP=44.2683;RPPR=2370.17;RUN=1;SAF=10;SAP=3.12459;SAR=9;SRF=597;SRP=5.04711;SRR=564;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.9807:8:8:287:0:0:0,-2.40824,-10 0/0:43.9498:5:5:179:0:0:0,-1.50515,-10 0/0:77.0631:16:16:602:0:0:0,-4.81648,-10 0/0:40.9395:4:4:152:0:0:0,-1.20412,-10 0/0:52.9807:8:8:288:0:0:0,-2.40824,-10 0/0:40.9395:4:4:151:0:0:0,-1.20412,-10 0/0:95.1252:22:22:797:0:0:0,-6.62266,-10 0/0:92.1139:21:21:780:0:0:0,-6.32163,-10 0/0:52.9807:8:8:272:0:0:0,-2.40824,-10 0/1:1.65883e-06:3:0:0:3:114:-10,-0.90309,0 0/1:6.63531e-06:5:0:0:5:189:-10,-1.50515,0 0/0:34.9189:2:2:76:0:0:0,-0.60206,-7.22 0/0:49.7262:16:15:558:1:16:0,-2.01236,-10 0/1:99:21:13:455:8:294:-10,0,-10 0/0:68.0322:13:13:471:0:0:0,-3.91339,-10 0/0:65.0219:12:12:443:0:0:0,-3.61236,-10 0/0:59.0013:10:10:376:0:0:0,-3.0103,-10 0/0:40.9395:4:4:149:0:0:0,-1.20412,-10 0/0:71.0425:14:14:526:0:0:0,-4.21442,-10 0/0:92.1139:22:21:772:0:0:0,-6.32163,-10 0/0:62.0116:11:11:392:0:0:0,-3.31133,-10 0/0:86.094:19:19:714:0:0:0,-5.71957,-10 0/0:34.9189:2:2:76:0:0:0,-0.60206,-7.22 0/0:62.0116:11:11:416:0:0:0,-3.31133,-10 0/0:62.0116:11:11:387:0:0:0,-3.31133,-10 0/0:95.1252:22:22:809:0:0:0,-6.62266,-10 0/0:55.991:9:9:313:0:0:0,-2.70927,-10 0/0:68.0322:13:13:492:0:0:0,-3.91339,-10 0/0:74.0528:15:15:540:0:0:0,-4.51545,-10 0/0:89.1044:20:20:749:0:0:0,-6.0206,-10 0/0:37.9292:3:3:114:0:0:0,-0.90309,-10 0/0:49.9704:7:7:242:0:0:0,-2.10721,-10 0/0:74.0528:15:15:543:0:0:0,-4.51545,-10 0/0:46.9601:6:6:228:0:0:0,-1.80618,-10 0/0:62.0116:11:11:387:0:0:0,-3.31133,-10 0/0:49.9704:7:7:243:0:0:0,-2.10721,-10 0/0:59.0013:10:10:350:0:0:0,-3.0103,-10 0/0:65.0219:12:12:449:0:0:0,-3.61236,-10 0/0:59.0013:10:10:378:0:0:0,-3.0103,-10 0/0:46.9601:6:6:226:0:0:0,-1.80618,-10 0/0:80.0734:17:17:589:0:0:0,-5.11751,-10 0/0:71.0425:14:14:529:0:0:0,-4.21442,-10 0/0:92.1139:21:21:764:0:0:0,-6.32163,-10 0/0:98.1325:23:23:848:0:0:0,-6.92369,-10 0/0:55.991:9:9:328:0:0:0,-2.70927,-10 0/0:65.0219:12:12:454:0:0:0,-3.61236,-10 0/0:72.8807:32:31:1094:1:38:0,-4.32781,-10 0/0:77.0631:16:16:584:0:0:0,-4.81648,-10 0/0:59.0013:10:10:374:0:0:0,-3.0103,-10 0/0:99:36:36:1329:0:0:0,-10,-10 0/0:40.9395:4:4:142:0:0:0,-1.20412,-10 0/0:99:30:30:1066:0:0:0,-9.0309,-10 0/0:80.0734:17:17:631:0:0:0,-5.11751,-10 0/0:46.9601:6:6:226:0:0:0,-1.80618,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:68.0322:13:13:465:0:0:0,-3.91339,-10 0/0:68.0322:13:13:468:0:0:0,-3.91339,-10 0/0:31.9086:1:1:38:0:0:0,-0.30103,-3.8 0/0:59.0013:10:10:369:0:0:0,-3.0103,-10 0/0:40.9395:4:4:142:0:0:0,-1.20412,-10 0/0:99:24:24:845:0:0:0,-7.22472,-10 0/0:68.0322:13:13:458:0:0:0,-3.91339,-10 0/0:95.1252:22:22:773:0:0:0,-6.62266,-10 0/0:77.0631:16:16:572:0:0:0,-4.81648,-10 0/0:55.991:9:9:307:0:0:0,-2.70927,-10 0/0:99:25:25:900:0:0:0,-7.52575,-10 0/0:59.0013:10:10:364:0:0:0,-3.0103,-10 0/0:49.9704:7:7:252:0:0:0,-2.10721,-10 0/0:99:25:25:928:0:0:0,-7.52575,-10 0/0:59.0013:10:10:376:0:0:0,-3.0103,-10 0/0:83.0836:18:18:676:0:0:0,-5.41854,-10 0/0:95.1252:22:22:761:0:0:0,-6.62266,-10 0/0:59.0013:10:10:373:0:0:0,-3.0103,-10 0/0:62.0116:11:11:403:0:0:0,-3.31133,-10 0/0:65.0219:12:12:452:0:0:0,-3.61236,-10 0/0:62.0116:11:11:406:0:0:0,-3.31133,-10 0/0:40.9395:4:4:152:0:0:0,-1.20412,-10 0/0:43.9498:5:5:183:0:0:0,-1.50515,-10 0/0:34.9189:2:2:76:0:0:0,-0.60206,-7.22 0/0:62.0116:11:11:412:0:0:0,-3.31133,-10 0/0:95.1252:22:22:792:0:0:0,-6.62266,-10 0/0:92.1139:21:21:776:0:0:0,-6.32163,-10 0/0:89.1044:20:20:729:0:0:0,-6.0206,-10 0/0:55.991:9:9:342:0:0:0,-2.70927,-10 0/0:95.1252:22:22:800:0:0:0,-6.62266,-10 0/0:43.9498:5:5:190:0:0:0,-1.50515,-10 0/0:52.9807:8:8:281:0:0:0,-2.40824,-10 0/0:71.0425:14:14:521:0:0:0,-4.21442,-10 0/0:46.9601:6:6:214:0:0:0,-1.80618,-10 0/0:0.00592471:8:7:266:1:16:-0.09485,0,-10 0/0:59.0013:10:10:367:0:0:0,-3.0103,-10 0/0:52.9807:8:8:280:0:0:0,-2.40824,-10 scaffold_215 998506 . G A 385.214 . AB=0.708333;ABP=12.0581;AC=2;AF=0.0108696;AN=184;AO=17;CIGAR=1X;DP=1181;DPB=1181;DPRA=0.933449;EPP=4.1599;EPPR=24.7698;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=5.43408;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=618;QR=42876;RO=1164;RPP=31.7504;RPPR=2178.96;RUN=1;SAF=6;SAP=6.20364;SAR=11;SRF=594;SRP=4.08484;SRR=570;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.7551:8:8:269:0:0:0,-2.40824,-10 0/0:35.7242:5:5:186:0:0:0,-1.50515,-10 0/0:68.8375:16:16:603:0:0:0,-4.81648,-10 0/0:32.7139:4:4:152:0:0:0,-1.20412,-10 0/0:44.7551:8:8:298:0:0:0,-2.40824,-10 0/0:32.7139:4:4:141:0:0:0,-1.20412,-10 0/0:86.899:22:22:825:0:0:0,-6.62266,-10 0/0:83.889:21:21:767:0:0:0,-6.32163,-10 0/0:44.7551:8:8:272:0:0:0,-2.40824,-10 0/0:29.7036:3:3:114:0:0:0,-0.90309,-10 0/0:35.7242:5:5:190:0:0:0,-1.50515,-10 0/0:26.6933:2:2:76:0:0:0,-0.60206,-7.22 0/0:68.8375:16:16:532:0:0:0,-4.81648,-10 0/0:83.889:21:21:769:0:0:0,-6.32163,-10 0/0:59.8066:13:13:493:0:0:0,-3.91339,-10 0/0:56.7963:12:12:430:0:0:0,-3.61236,-10 0/0:50.7757:10:10:368:0:0:0,-3.0103,-10 0/0:32.7139:4:4:151:0:0:0,-1.20412,-10 0/0:65.8272:15:15:565:0:0:0,-4.51545,-10 0/0:86.899:22:22:812:0:0:0,-6.62266,-10 0/0:53.786:11:11:399:0:0:0,-3.31133,-10 0/0:77.8684:19:19:698:0:0:0,-5.71957,-10 0/0:26.6933:2:2:76:0:0:0,-0.60206,-7.22 0/0:53.786:11:11:418:0:0:0,-3.31133,-10 0/0:53.786:11:11:415:0:0:0,-3.31133,-10 0/0:86.899:22:22:832:0:0:0,-6.62266,-10 0/0:47.7654:9:9:333:0:0:0,-2.70927,-10 0/0:59.8066:13:13:483:0:0:0,-3.91339,-10 0/0:65.8272:15:15:524:0:0:0,-4.51545,-10 0/0:77.8684:19:19:705:0:0:0,-5.71957,-10 0/0:29.7036:3:3:114:0:0:0,-0.90309,-10 0/0:41.7448:7:7:241:0:0:0,-2.10721,-10 0/0:62.8169:14:14:501:0:0:0,-4.21442,-10 0/0:38.7345:6:6:226:0:0:0,-1.80618,-10 0/0:53.786:11:11:392:0:0:0,-3.31133,-10 0/0:41.7448:7:7:264:0:0:0,-2.10721,-10 0/0:50.7757:10:10:377:0:0:0,-3.0103,-10 0/0:59.8066:13:13:484:0:0:0,-3.91339,-10 0/0:50.7757:10:10:380:0:0:0,-3.0103,-10 0/0:38.7345:6:6:228:0:0:0,-1.80618,-10 0/0:71.8478:17:17:581:0:0:0,-5.11751,-10 0/0:62.8169:14:14:520:0:0:0,-4.21442,-10 0/0:83.889:21:21:769:0:0:0,-6.32163,-10 0/0:89.909:23:23:868:0:0:0,-6.92369,-10 0/0:47.7654:9:9:338:0:0:0,-2.70927,-10 0/0:56.7963:12:12:456:0:0:0,-3.61236,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:68.8375:16:16:607:0:0:0,-4.81648,-10 0/0:50.7757:10:10:377:0:0:0,-3.0103,-10 0/0:99:37:37:1392:0:0:0,-10,-10 0/0:29.7036:3:3:108:0:0:0,-0.90309,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:71.8478:17:17:631:0:0:0,-5.11751,-10 0/0:38.7345:6:6:190:0:0:0,-1.80618,-10 0/0:99:36:36:1333:0:0:0,-10,-10 0/0:59.8066:13:13:494:0:0:0,-3.91339,-10 0/0:59.8066:13:13:492:0:0:0,-3.91339,-10 0/0:23.683:1:1:38:0:0:0,-0.30103,-3.8 0/0:50.7757:10:10:380:0:0:0,-3.0103,-10 0/0:32.7139:4:4:147:0:0:0,-1.20412,-10 0/0:89.909:23:23:864:0:0:0,-6.92369,-10 0/0:59.8066:13:13:484:0:0:0,-3.91339,-10 0/0:86.899:22:22:818:0:0:0,-6.62266,-10 0/0:68.8375:16:16:572:0:0:0,-4.81648,-10 0/0:47.7654:9:9:332:0:0:0,-2.70927,-10 0/0:98.9399:26:26:943:0:0:0,-7.82678,-10 0/0:50.7757:10:10:380:0:0:0,-3.0103,-10 0/0:41.7448:7:7:266:0:0:0,-2.10721,-10 0/0:95.928:25:25:928:0:0:0,-7.52575,-10 0/0:50.7757:10:10:372:0:0:0,-3.0103,-10 0/0:74.8581:18:18:666:0:0:0,-5.41854,-10 0/0:86.899:22:22:814:0:0:0,-6.62266,-10 0/0:50.7757:10:10:354:0:0:0,-3.0103,-10 0/1:0.000693867:11:0:0:11:390:-10,-3.31133,0 0/1:99:13:7:266:6:228:-10,0,-10 0/0:47.7654:9:9:335:0:0:0,-2.70927,-10 0/0:32.7139:4:4:150:0:0:0,-1.20412,-10 0/0:35.7242:5:5:181:0:0:0,-1.50515,-10 0/0:26.6933:2:2:76:0:0:0,-0.60206,-7.22 0/0:53.786:11:11:392:0:0:0,-3.31133,-10 0/0:89.909:23:23:842:0:0:0,-6.92369,-10 0/0:83.889:21:21:769:0:0:0,-6.32163,-10 0/0:80.8787:20:20:752:0:0:0,-6.0206,-10 0/0:47.7654:9:9:342:0:0:0,-2.70927,-10 0/0:86.899:22:22:833:0:0:0,-6.62266,-10 0/0:35.7242:5:5:190:0:0:0,-1.50515,-10 0/0:44.7551:8:8:279:0:0:0,-2.40824,-10 0/0:62.8169:14:14:489:0:0:0,-4.21442,-10 0/0:38.7345:6:6:204:0:0:0,-1.80618,-10 0/0:44.7551:8:8:290:0:0:0,-2.40824,-10 0/0:50.7757:10:10:343:0:0:0,-3.0103,-10 0/0:44.7551:8:8:283:0:0:0,-2.40824,-10 scaffold_215 998564 . GGGGGT G 443.072 . AB=0.40678;ABP=7.46366;AC=2;AF=0.0108696;AN=184;AO=24;CIGAR=1M5D1M;DP=2402;DPB=2388.57;DPRA=1.13316;EPP=46.8017;EPPR=6.66069;GTI=0;LEN=5;MEANALT=2;MQM=59.5417;MQMR=59.9509;NS=92;NUMALT=1;ODDS=9.88403;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=238;PRO=7;QA=809;QR=84805;RO=2361;RPP=55.1256;RPPR=5129.86;RUN=1;SAF=1;SAP=46.8017;SAR=23;SRF=1212;SRP=6.66069;SRR=1149;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:85.0703:17:16:574:0:0:0,-4.81648,-10 0|0:97.1056:20:20:691:0:0:0,-6.0206,-10 0|0:99:32:32:1168:0:0:0,-9.63296,-10 0|0:91.0894:18:18:631:0:0:0,-5.41854,-10 0|0:76.0394:13:13:474:0:0:0,-3.91339,-10 0|0:70.0188:11:11:407:0:0:0,-3.31133,-10 0|0:99:46:46:1651:0:0:0,-10,-10 0|0:99:35:35:1234:0:0:0,-10,-10 0|0:91.0894:19:18:672:0:0:0,-5.41854,-10 0|0:42.9261:2:2:74:0:0:0,-0.60206,-7.03 0|0:57.9776:7:7:254:0:0:0,-2.10721,-10 0|0:79.0497:14:14:504:0:0:0,-4.21442,-10 0|0:99:48:48:1733:0:0:0,-10,-10 0|0:99:57:56:2033:0:0:0,-10,-10 0|0:99:33:33:1192:0:0:0,-9.93399,-10 0|0:99:37:37:1284:0:0:0,-10,-10 0|0:99:37:37:1362:0:0:0,-10,-10 0|0:76.0394:13:13:465:0:0:0,-3.91339,-10 0|0:99:30:30:1058:0:0:0,-9.0309,-10 0|0:99:53:53:1869:0:0:0,-10,-10 0|0:99:27:27:961:0:0:0,-8.12781,-10 0|0:99:37:35:1242:0:0:0,-10,-10 0|0:73.0291:12:12:451:0:0:0,-3.61236,-10 0|0:99:27:27:971:0:0:0,-8.12781,-10 0|0:99:31:31:1116:0:0:0,-9.33193,-10 0|0:99:30:30:1051:0:0:0,-9.0309,-10 0|0:99:26:25:929:0:0:0,-7.52575,-10 0|0:99:23:23:835:0:0:0,-6.92369,-10 0|0:99:27:27:982:0:0:0,-8.12781,-10 0|0:99:48:48:1709:0:0:0,-10,-10 0|0:48.9467:4:4:152:0:0:0,-1.20412,-10 0|0:63.9982:9:9:327:0:0:0,-2.70927,-10 0|0:91.0894:18:18:665:0:0:0,-5.41854,-10 0|0:76.0394:14:13:460:0:0:0,-3.91339,-10 0|0:99:29:29:1055:0:0:0,-8.72987,-10 0|0:70.0188:11:11:384:0:0:0,-3.31133,-10 0|0:73.0291:12:12:404:0:0:0,-3.61236,-10 0|0:99:55:55:1963:0:0:0,-10,-10 0|0:99:25:25:914:0:0:0,-7.52575,-10 0|0:97.1056:20:20:700:0:0:0,-6.0206,-10 0|0:99:36:36:1323:0:0:0,-10,-10 0|0:99:29:29:1039:0:0:0,-8.72987,-10 0|0:85.0703:16:16:587:0:0:0,-4.81648,-10 0|0:99:36:36:1318:0:0:0,-10,-10 0|0:99:23:23:832:0:0:0,-6.92369,-10 0|0:82.06:15:15:534:0:0:0,-4.51545,-10 0|0:99:56:54:1975:0:0:0,-10,-10 0|0:99:41:41:1480:0:0:0,-10,-10 0|0:94.1008:19:19:697:0:0:0,-5.71957,-10 0|0:99:46:46:1651:0:0:0,-10,-10 0|0:97.1056:20:20:710:0:0:0,-6.0206,-10 0|0:99:35:34:1199:0:0:0,-10,-10 0|0:91.0894:18:18:646:0:0:0,-5.41854,-10 0|0:48.9467:4:4:139:0:0:0,-1.20412,-10 0|0:99:60:59:2174:0:0:0,-10,-10 0|0:88.0799:17:17:598:0:0:0,-5.11751,-10 0|0:99:25:24:874:0:0:0,-7.22472,-10 0|0:82.06:15:15:538:0:0:0,-4.51545,-10 0|0:99:29:29:987:0:0:0,-8.72987,-10 0|0:82.06:15:15:545:0:0:0,-4.51545,-10 0|0:99:41:41:1489:0:0:0,-10,-10 0|0:99:35:35:1282:0:0:0,-10,-10 0|0:99:48:48:1715:0:0:0,-10,-10 0|0:99:29:28:1027:0:0:0,-8.42884,-10 0|0:85.0703:16:16:578:0:0:0,-4.81648,-10 0|1:99:37:22:814:13:467:-10,0,-10 0|0:97.1056:20:20:719:0:0:0,-6.0206,-10 0|0:85.0703:16:16:584:0:0:0,-4.81648,-10 0|0:99:30:30:1028:0:0:0,-9.0309,-10 0|0:91.0894:18:18:628:0:0:0,-5.41854,-10 0|0:97.1056:20:20:722:0:0:0,-6.0206,-10 0|0:99:38:38:1365:0:0:0,-10,-10 0|0:99:26:26:953:0:0:0,-7.82678,-10 0|0:99:33:33:1198:0:0:0,-9.93399,-10 0|0:99:32:32:1126:0:0:0,-9.63296,-10 0|0:76.0394:13:13:431:0:0:0,-3.91339,-10 0|0:99:25:25:892:0:0:0,-7.52575,-10 0|0:94.1008:19:19:678:0:0:0,-5.71957,-10 0|0:82.06:15:15:540:0:0:0,-4.51545,-10 0|0:70.0188:11:11:384:0:0:0,-3.31133,-10 0|0:99:41:40:1456:0:0:0,-10,-10 0|0:99:29:29:1074:0:0:0,-8.72987,-10 0|0:99:38:38:1360:0:0:0,-10,-10 0|1:99:22:11:403:11:342:-10,0,-10 0|0:99:25:25:905:0:0:0,-7.52575,-10 0|0:73.0291:12:12:410:0:0:0,-3.61236,-10 0|0:99:33:33:1175:0:0:0,-9.93399,-10 0|0:91.0894:18:18:640:0:0:0,-5.41854,-10 0|0:67.0085:10:10:343:0:0:0,-3.0103,-10 0|0:94.1008:19:19:696:0:0:0,-5.71957,-10 0|0:99:23:23:810:0:0:0,-6.92369,-10 0|0:99:28:27:933:0:0:0,-8.12781,-10 scaffold_215 1086139 . C T 13111.9 . AB=0.604478;ABP=15.715;AC=48;AF=0.26087;AN=184;AO=470;CIGAR=1X;DP=1682;DPB=1682;DPRA=1.07691;EPP=3.02878;EPPR=3.01209;GTI=4;LEN=1;MEANALT=1.03333;MQM=59.9255;MQMR=59.9686;NS=92;NUMALT=1;ODDS=0.220404;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17245;QR=44580;RO=1211;RPP=1023.6;RPPR=2623.98;RUN=1;SAF=234;SAP=3.02878;SAR=236;SRF=604;SRP=3.02644;SRR=607;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:27.0222:10:10:380:0:0:0,-3.0103,-10 0/0:30.0325:11:11:418:0:0:0,-3.31133,-10 0/0:57.1252:20:20:759:0:0:0,-6.0206,-10 0/0:42.0737:15:15:542:0:0:0,-4.51545,-10 0/0:21.0016:8:8:296:0:0:0,-2.40824,-10 0/0:21.0016:8:8:300:0:0:0,-2.40824,-10 0/0:99:38:38:1400:0:0:0,-10,-10 0/0:81.2075:28:28:1056:0:0:0,-8.42884,-10 0/0:21.0016:8:8:300:0:0:0,-2.40824,-10 0/1:0.56015:4:4:148:0:0:0,-1.20412,-10 0/0:27.0222:10:10:380:0:0:0,-3.0103,-10 0/0:11.9707:5:5:183:0:0:0,-1.50515,-10 0/0:55.2732:33:32:1148:1:29:0,-5.51548,-10 0/0:81.2075:28:28:1026:0:0:0,-8.42884,-10 0/0:99:39:39:1388:0:0:0,-10,-10 0/0:51.1046:18:18:662:0:0:0,-5.41854,-10 0/0:87.2278:30:30:1105:0:0:0,-9.0309,-10 0/0:39.0634:14:14:518:0:0:0,-4.21442,-10 0/0:60.1355:21:21:786:0:0:0,-6.32163,-10 0/0:93.2471:32:32:1144:0:0:0,-9.63296,-10 0/1:99:14:7:266:7:249:-10,0,-10 0/1:99:22:12:430:10:376:-10,0,-10 1/1:13.9892:10:0:0:10:380:-10,-3.0103,0 0/1:99:25:12:453:13:489:-10,0,-10 1/1:35.0613:17:0:0:17:645:-10,-5.11751,0 1/1:47.1025:21:0:0:21:793:-10,-6.32163,0 0/0:36.0531:13:13:471:0:0:0,-3.91339,-10 1/1:26.0304:14:0:0:14:486:-10,-4.21442,0 1/1:32.051:16:0:0:16:585:-10,-4.81648,0 1/1:41.0819:19:0:0:19:711:-10,-5.71957,0 0/1:0.0472476:5:0:0:5:190:-10,-1.50515,0 0/0:42.0737:15:15:551:0:0:0,-4.51545,-10 1/1:44.0922:20:0:0:20:728:-10,-6.0206,0 0/0:8.96041:4:4:149:0:0:0,-1.20412,-10 0/0:45.084:16:16:595:0:0:0,-4.81648,-10 0/0:39.0634:14:14:488:0:0:0,-4.21442,-10 0/0:39.0634:14:14:503:0:0:0,-4.21442,-10 0/0:84.2177:29:29:1063:0:0:0,-8.72987,-10 1/1:16.9995:11:0:0:11:392:-10,-3.31133,0 0/0:66.1561:23:23:848:0:0:0,-6.92369,-10 0/1:99:29:12:434:17:603:-10,0,-10 0/0:14.981:6:6:224:0:0:0,-1.80618,-10 1/1:29.0407:15:0:0:15:521:-10,-4.51545,0 0/0:23.4704:25:24:909:1:38:0,-2.32781,-10 0/1:99:11:5:165:6:226:-10,0,-10 1/1:38.0716:18:0:0:18:668:-10,-5.41854,0 1/1:99:45:0:0:45:1652:-10,-10,0 1/1:50.1128:23:0:0:22:790:-10,-6.62266,0 0/1:0.393207:8:0:0:8:304:-10,-2.40824,0 1/1:99:40:0:0:40:1465:-10,-10,0 1/1:35.0613:17:0:0:17:644:-10,-5.11751,0 1/1:86.2361:34:0:0:34:1251:-10,-10,0 0/0:42.0737:15:15:560:0:0:0,-4.51545,-10 0/1:0.192155:7:0:0:7:266:-10,-2.10721,0 1/1:45.9239:33:1:25:32:1168:-10,-5.91548,0 1/1:10.9789:9:0:0:9:319:-10,-2.70927,0 0/1:99:13:5:186:8:283:-10,0,-10 0/0:24.0119:9:9:328:0:0:0,-2.70927,-10 0/0:54.1149:19:19:713:0:0:0,-5.71957,-10 0/0:30.0325:11:11:405:0:0:0,-3.31133,-10 0/0:87.2278:30:30:1087:0:0:0,-9.0309,-10 0/0:48.0943:17:17:609:0:0:0,-5.11751,-10 0/0:99:38:38:1408:0:0:0,-10,-10 0/0:39.0634:14:14:521:0:0:0,-4.21442,-10 0/0:33.0428:12:12:454:0:0:0,-3.61236,-10 0/0:78.1973:27:27:1002:0:0:0,-8.12781,-10 0/0:54.1149:19:19:696:0:0:0,-5.71957,-10 0/0:27.0222:10:10:374:0:0:0,-3.0103,-10 0/0:99:41:41:1529:0:0:0,-10,-10 0/0:24.0119:9:9:318:0:0:0,-2.70927,-10 0/0:57.1252:20:20:725:0:0:0,-6.0206,-10 0/0:87.2278:30:30:1125:0:0:0,-9.0309,-10 0/0:63.1458:22:22:826:0:0:0,-6.62266,-10 0/0:54.1149:19:19:662:0:0:0,-5.71957,-10 0/0:90.2376:31:31:1138:0:0:0,-9.33193,-10 0/0:45.084:16:16:600:0:0:0,-4.81648,-10 0/0:39.0634:14:14:517:0:0:0,-4.21442,-10 0/0:63.1458:22:22:829:0:0:0,-6.62266,-10 0/0:8.96041:4:4:152:0:0:0,-1.20412,-10 0/0:42.0737:15:15:557:0:0:0,-4.51545,-10 0/0:66.1561:23:23:839:0:0:0,-6.92369,-10 0/0:57.1252:20:20:735:0:0:0,-6.0206,-10 0/0:48.0943:17:17:633:0:0:0,-5.11751,-10 0/0:66.1561:23:23:850:0:0:0,-6.92369,-10 0/0:45.084:16:16:608:0:0:0,-4.81648,-10 0/0:17.9913:7:7:265:0:0:0,-2.10721,-10 1/1:26.0304:14:0:0:14:505:-10,-4.21442,0 1/1:23.0201:13:0:0:13:489:-10,-3.91339,0 0/0:17.9913:7:7:235:0:0:0,-2.10721,-10 0/0:42.0737:15:15:566:0:0:0,-4.51545,-10 0/0:42.0737:15:15:543:0:0:0,-4.51545,-10 0/0:36.0531:13:13:472:0:0:0,-3.91339,-10 scaffold_215 1109545 . C T 290.475 . AB=0.521739;ABP=3.10471;AC=1;AF=0.00543478;AN=184;AO=15;CIGAR=1X;DP=1772;DPB=1772;DPRA=1.01299;EPP=4.31318;EPPR=19.3923;GTI=0;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.9892;NS=92;NUMALT=1;ODDS=8.58214;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=478;QR=63724;RO=1753;RPP=27.4756;RPPR=3587.12;RUN=1;SAF=8;SAP=3.15506;SAR=7;SRF=908;SRP=7.92677;SRR=845;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:79.4177:16:16:555:0:0:0,-4.81648,-10 0/0:82.428:17:17:630:0:0:0,-5.11751,-10 0/0:99:27:27:1015:0:0:0,-8.12781,-10 0/0:55.3353:8:8:304:0:0:0,-2.40824,-10 0/0:82.428:17:17:620:0:0:0,-5.11751,-10 0/0:82.428:17:17:613:0:0:0,-5.11751,-10 0/0:99:37:37:1354:0:0:0,-10,-10 0/0:97.4781:22:22:808:0:0:0,-6.62266,-10 0/0:82.428:17:17:568:0:0:0,-5.11751,-10 0/0:40.2838:3:3:114:0:0:0,-0.90309,-10 0/0:49.3147:6:6:203:0:0:0,-1.80618,-10 0/0:61.3559:10:10:370:0:0:0,-3.0103,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:99:33:33:1111:0:0:0,-9.93399,-10 0/0:99:38:38:1401:0:0:0,-10,-10 0/0:99:36:36:1279:0:0:0,-10,-10 0/0:88.4484:19:19:713:0:0:0,-5.71957,-10 0/0:85.4382:18:18:679:0:0:0,-5.41854,-10 0/0:64.3662:11:11:390:0:0:0,-3.31133,-10 0/0:99:33:33:1180:0:0:0,-9.93399,-10 0/0:82.428:17:17:640:0:0:0,-5.11751,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:52.325:7:7:266:0:0:0,-2.10721,-10 0/0:99:25:25:857:0:0:0,-7.52575,-10 0/0:99:26:25:933:0:0:0,-7.52575,-10 0/0:73.0662:23:22:782:1:16:0,-3.96196,-10 0/0:61.8548:19:18:678:1:16:0,-2.84082,-10 0/0:91.4572:20:20:735:0:0:0,-6.0206,-10 0/0:94.4685:21:21:767:0:0:0,-6.32163,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:46.3044:5:5:158:0:0:0,-1.50515,-10 0/0:64.3662:11:11:398:0:0:0,-3.31133,-10 0/0:85.4382:18:18:631:0:0:0,-5.41854,-10 0/0:70.3868:13:13:469:0:0:0,-3.91339,-10 0/0:79.4177:16:16:577:0:0:0,-4.81648,-10 0/0:37.2735:2:2:71:0:0:0,-0.60206,-6.745 0/0:67.3765:12:12:434:0:0:0,-3.61236,-10 0/0:99:39:39:1438:0:0:0,-10,-10 0/0:52.325:7:7:228:0:0:0,-2.10721,-10 0/0:94.4685:21:21:780:0:0:0,-6.32163,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:85.4382:18:18:678:0:0:0,-5.41854,-10 0/0:99:23:23:813:0:0:0,-6.92369,-10 0/0:99:24:24:899:0:0:0,-7.22472,-10 0/0:99:26:26:984:0:0:0,-7.82678,-10 0/0:79.4177:16:16:591:0:0:0,-4.81648,-10 0/0:99:48:48:1738:0:0:0,-10,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 0/0:73.3971:14:14:524:0:0:0,-4.21442,-10 0/0:82.428:17:17:623:0:0:0,-5.11751,-10 0/0:73.3971:14:14:479:0:0:0,-4.21442,-10 0/0:99:28:28:1023:0:0:0,-8.42884,-10 0/0:58.3456:9:9:329:0:0:0,-2.70927,-10 0/0:49.3147:6:6:199:0:0:0,-1.80618,-10 0/0:99:28:28:1009:0:0:0,-8.42884,-10 0/0:82.428:17:17:626:0:0:0,-5.11751,-10 0/0:82.428:17:17:610:0:0:0,-5.11751,-10 0/0:55.3353:8:8:286:0:0:0,-2.40824,-10 0/0:82.428:18:17:621:0:0:0,-5.11751,-10 0/0:70.3868:13:13:480:0:0:0,-3.91339,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:88.4484:19:19:663:0:0:0,-5.71957,-10 0/0:97.4781:23:22:796:0:0:0,-6.62266,-10 0/0:70.3868:13:13:465:0:0:0,-3.91339,-10 0/0:64.3662:11:11:402:0:0:0,-3.31133,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:97.4781:22:22:813:0:0:0,-6.62266,-10 0/0:58.3456:9:9:318:0:0:0,-2.70927,-10 0/0:94.4685:21:21:777:0:0:0,-6.32163,-10 0/0:67.3765:12:12:453:0:0:0,-3.61236,-10 0/0:44.229:13:11:395:1:16:0,-1.20318,-10 0/1:99:23:11:412:12:430:-10,0,-10 0/0:99:33:33:1242:0:0:0,-9.93399,-10 0/0:99:23:23:864:0:0:0,-6.92369,-10 0/0:99:30:30:1066:0:0:0,-9.0309,-10 0/0:76.4074:15:15:540:0:0:0,-4.51545,-10 0/0:76.4074:15:15:558:0:0:0,-4.51545,-10 0/0:70.3868:13:13:484:0:0:0,-3.91339,-10 0/0:52.325:7:7:253:0:0:0,-2.10721,-10 0/0:67.3765:12:12:440:0:0:0,-3.61236,-10 0/0:99:38:38:1413:0:0:0,-10,-10 0/0:91.4572:20:20:689:0:0:0,-6.0206,-10 0/0:99:25:25:882:0:0:0,-7.52575,-10 0/0:94.4685:21:21:751:0:0:0,-6.32163,-10 0/0:97.4781:22:22:809:0:0:0,-6.62266,-10 0/0:55.3353:8:8:292:0:0:0,-2.40824,-10 0/0:67.3765:12:12:442:0:0:0,-3.61236,-10 0/0:76.4074:15:15:556:0:0:0,-4.51545,-10 0/0:64.3662:11:11:361:0:0:0,-3.31133,-10 0/0:97.4781:22:22:786:0:0:0,-6.62266,-10 0/0:97.4781:22:22:818:0:0:0,-6.62266,-10 0/0:85.4382:18:18:639:0:0:0,-5.41854,-10 scaffold_215 1183738 . A G 1132.98 . AB=0.518072;ABP=3.24576;AC=3;AF=0.0163043;AN=184;AO=44;CIGAR=1X;DP=1884;DPB=1884;DPRA=2.05;EPP=3.79993;EPPR=10.0112;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9043;NS=92;NUMALT=1;ODDS=1.389;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1603;QR=67463;RO=1839;RPP=98.5551;RPPR=3996.35;RUN=1;SAF=24;SAP=3.79993;SAR=20;SRF=958;SRP=10.0112;SRR=881;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:66.7425:18:18:642:0:0:0,-5.41854,-10 0/0:27.6086:5:5:188:0:0:0,-1.50515,-10 0/0:78.7837:22:22:824:0:0:0,-6.62266,-10 0/0:69.7528:19:19:678:0:0:0,-5.71957,-10 0/0:39.6498:9:9:336:0:0:0,-2.70927,-10 0/0:24.5983:4:4:150:0:0:0,-1.20412,-10 0/0:99:39:39:1419:0:0:0,-10,-10 0/0:75.7734:21:21:763:0:0:0,-6.32163,-10 0/0:57.7116:15:15:566:0:0:0,-4.51545,-10 0/0:18.5777:2:2:76:0:0:0,-0.60206,-7.22 0/0:33.6292:7:7:264:0:0:0,-2.10721,-10 0/0:27.6086:5:5:164:0:0:0,-1.50515,-10 0/0:69.7528:19:19:679:0:0:0,-5.71957,-10 0/0:99:39:39:1472:0:0:0,-10,-10 0/0:69.7528:19:19:688:0:0:0,-5.71957,-10 0/0:78.7837:22:22:829:0:0:0,-6.62266,-10 0/0:90.824:26:26:957:0:0:0,-7.82678,-10 0/0:30.6189:6:6:223:0:0:0,-1.80618,-10 0/0:90.824:26:26:958:0:0:0,-7.82678,-10 0/0:99:45:45:1620:0:0:0,-10,-10 0/0:48.6807:12:12:449:0:0:0,-3.61236,-10 0/0:96.8418:28:28:1013:0:0:0,-8.42884,-10 0/0:30.6189:6:6:206:0:0:0,-1.80618,-10 0/0:78.7837:22:22:827:0:0:0,-6.62266,-10 0/0:81.7939:23:23:860:0:0:0,-6.92369,-10 0/0:99:30:30:1084:0:0:0,-9.0309,-10 0/0:45.6704:11:11:410:0:0:0,-3.31133,-10 0/0:54.7013:14:14:508:0:0:0,-4.21442,-10 0/0:57.7116:15:15:558:0:0:0,-4.51545,-10 0/0:99:43:43:1582:0:0:0,-10,-10 0/0:27.6086:5:5:190:0:0:0,-1.50515,-10 0/0:24.5983:4:4:152:0:0:0,-1.20412,-10 0/0:78.7837:22:22:787:0:0:0,-6.62266,-10 0/0:48.6807:12:12:446:0:0:0,-3.61236,-10 0/0:66.7425:18:18:676:0:0:0,-5.41854,-10 0/0:48.6807:12:12:445:0:0:0,-3.61236,-10 0/0:54.7013:14:14:530:0:0:0,-4.21442,-10 0/0:81.7939:23:23:843:0:0:0,-6.92369,-10 0/0:51.691:13:13:490:0:0:0,-3.91339,-10 0/0:48.6807:12:12:433:0:0:0,-3.61236,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:75.7734:21:21:769:0:0:0,-6.32163,-10 0/0:60.7219:16:16:595:0:0:0,-4.81648,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:96.8418:28:28:1021:0:0:0,-8.42884,-10 0/0:54.7013:14:14:526:0:0:0,-4.21442,-10 0/0:99:50:50:1806:0:0:0,-10,-10 0/0:81.7939:23:23:829:0:0:0,-6.92369,-10 0/0:60.7219:16:16:574:0:0:0,-4.81648,-10 0/0:99:38:38:1417:0:0:0,-10,-10 0/0:42.6601:10:10:364:0:0:0,-3.0103,-10 0/0:99:39:39:1437:0:0:0,-10,-10 0/0:87.8141:25:25:919:0:0:0,-7.52575,-10 0/0:39.6498:9:9:338:0:0:0,-2.70927,-10 0/0:99:44:44:1646:0:0:0,-10,-10 0/0:51.691:13:13:493:0:0:0,-3.91339,-10 0/0:75.7734:21:21:760:0:0:0,-6.32163,-10 0/0:42.6601:10:10:350:0:0:0,-3.0103,-10 0/0:60.7219:16:16:604:0:0:0,-4.81648,-10 0/0:42.6601:10:10:375:0:0:0,-3.0103,-10 0/0:99:29:29:1031:0:0:0,-8.72987,-10 0/0:75.7734:21:21:716:0:0:0,-6.32163,-10 0/0:99:48:48:1732:0:0:0,-10,-10 0/0:84.8044:24:24:839:0:0:0,-7.22472,-10 0/0:48.6807:12:12:451:0:0:0,-3.61236,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:78.7837:22:22:815:0:0:0,-6.62266,-10 0/0:66.7425:18:18:660:0:0:0,-5.41854,-10 0/0:83.0282:40:39:1419:1:38:0,-6.63914,-10 0/0:54.7013:14:14:507:0:0:0,-4.21442,-10 0/0:72.7631:20:20:702:0:0:0,-6.0206,-10 0/0:99:36:36:1344:0:0:0,-10,-10 0/1:99:34:18:663:16:596:-10,0,-10 0/0:84.8044:24:24:898:0:0:0,-7.22472,-10 0/1:99:49:22:830:27:969:-10,0,-10 0/0:51.691:13:13:478:0:0:0,-3.91339,-10 0/0:60.7219:16:16:594:0:0:0,-4.81648,-10 0/0:60.7219:16:16:599:0:0:0,-4.81648,-10 0/0:42.6601:10:10:358:0:0:0,-3.0103,-10 0/0:72.7631:20:20:755:0:0:0,-6.0206,-10 0/0:99:40:40:1486:0:0:0,-10,-10 0/0:84.8044:24:24:882:0:0:0,-7.22472,-10 0/0:99:32:32:1195:0:0:0,-9.63296,-10 0/0:87.8141:25:25:900:0:0:0,-7.52575,-10 0/0:87.8141:25:25:933:0:0:0,-7.52575,-10 0/1:0.935081:1:1:16:0:0:0,-0.30103,-1.6 0/0:66.7425:18:18:683:0:0:0,-5.41854,-10 0/0:39.6498:9:9:327:0:0:0,-2.70927,-10 0/0:45.6704:11:11:411:0:0:0,-3.31133,-10 0/0:45.6704:11:11:418:0:0:0,-3.31133,-10 0/0:51.691:14:13:464:0:0:0,-3.91339,-10 0/0:33.6292:7:7:266:0:0:0,-2.10721,-10 scaffold_215 1314907 . C G 571.461 . AB=0.741935;ABP=18.771;AC=2;AF=0.0108696;AN=184;AO=24;CIGAR=1X;DP=1781;DPB=1781;DPRA=0.874566;EPP=4.45795;EPPR=3.07086;GTI=1;LEN=1;MEANALT=1;MQM=40.875;MQMR=49.7974;NS=92;NUMALT=1;ODDS=6.96166;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=874;QR=64232;RO=1757;RPP=55.1256;RPPR=3818.29;RUN=1;SAF=10;SAP=4.45795;SAR=14;SRF=882;SRP=3.07086;SRR=875;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:75.4001:17:17:624:0:0:0,-5.11751,-10 0/0:45.2972:7:7:263:0:0:0,-2.10721,-10 0/0:81.4207:19:19:664:0:0:0,-5.71957,-10 0/0:54.3281:10:10:374:0:0:0,-3.0103,-10 0/0:72.3898:16:16:596:0:0:0,-4.81648,-10 0/0:48.3075:8:8:299:0:0:0,-2.40824,-10 0/0:99:41:41:1462:0:0:0,-10,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:57.3384:11:11:372:0:0:0,-3.31133,-10 0/0:39.2766:5:5:190:0:0:0,-1.50515,-10 0/0:33.256:3:3:112:0:0:0,-0.90309,-10 0/0:42.2869:6:6:225:0:0:0,-1.80618,-10 0/0:99:31:31:1173:0:0:0,-9.33193,-10 0/0:99:43:43:1562:0:0:0,-10,-10 0/0:99:28:28:997:0:0:0,-8.42884,-10 0/0:84.4309:20:20:735:0:0:0,-6.0206,-10 0/0:81.4207:19:19:712:0:0:0,-5.71957,-10 0/0:45.2972:7:7:265:0:0:0,-2.10721,-10 0/0:81.4207:19:19:686:0:0:0,-5.71957,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/0:66.3693:14:14:503:0:0:0,-4.21442,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:39.2766:5:5:190:0:0:0,-1.50515,-10 0/0:93.4606:23:23:850:0:0:0,-6.92369,-10 0/0:66.3693:14:14:509:0:0:0,-4.21442,-10 0/0:99:27:27:978:0:0:0,-8.12781,-10 0/0:72.3898:16:16:608:0:0:0,-4.81648,-10 0/0:51.3178:9:9:333:0:0:0,-2.70927,-10 0/0:69.3795:15:15:517:0:0:0,-4.51545,-10 0/0:99:41:41:1481:0:0:0,-10,-10 0/0:39.2766:5:5:185:0:0:0,-1.50515,-10 0/0:45.2972:7:7:244:0:0:0,-2.10721,-10 0/0:81.4207:19:19:687:0:0:0,-5.71957,-10 0/0:63.359:13:13:461:0:0:0,-3.91339,-10 0/0:99:28:28:1036:0:0:0,-8.42884,-10 0/0:48.3075:8:8:302:0:0:0,-2.40824,-10 0/0:69.3795:15:15:503:0:0:0,-4.51545,-10 0/0:99:26:26:952:0:0:0,-7.82678,-10 0/0:57.3384:11:11:368:0:0:0,-3.31133,-10 0/0:63.359:13:13:475:0:0:0,-3.91339,-10 0/0:99:28:28:1036:0:0:0,-8.42884,-10 0/0:87.441:21:21:775:0:0:0,-6.32163,-10 0/0:66.3693:14:14:521:0:0:0,-4.21442,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:87.441:21:21:768:0:0:0,-6.32163,-10 0/0:66.3693:14:14:509:0:0:0,-4.21442,-10 0/0:99:46:46:1678:0:0:0,-10,-10 0/0:99:25:25:915:0:0:0,-7.52575,-10 0/0:48.3075:8:8:284:0:0:0,-2.40824,-10 0/0:99:40:40:1485:0:0:0,-10,-10 0/0:57.3384:11:11:385:0:0:0,-3.31133,-10 0/0:99:43:43:1534:0:0:0,-10,-10 0/0:75.4001:17:17:646:0:0:0,-5.11751,-10 0/0:39.2766:5:5:173:0:0:0,-1.50515,-10 0/0:99:41:41:1471:0:0:0,-10,-10 0/0:60.3487:12:12:442:0:0:0,-3.61236,-10 0/0:99:26:26:954:0:0:0,-7.82678,-10 0/0:57.3384:11:11:413:0:0:0,-3.31133,-10 0/0:78.4104:18:18:669:0:0:0,-5.41854,-10 0/1:7.65509e-05:9:0:0:9:341:-10,-2.70927,0 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:90.451:22:22:821:0:0:0,-6.62266,-10 0/0:99:36:36:1352:0:0:0,-10,-10 0/0:78.4104:18:18:646:0:0:0,-5.41854,-10 0/0:45.2972:7:7:266:0:0:0,-2.10721,-10 0/0:93.4606:23:23:833:0:0:0,-6.92369,-10 0/1:99:22:8:275:14:517:-10,0,-10 0/0:54.3281:10:10:376:0:0:0,-3.0103,-10 0/0:99:38:38:1386:0:0:0,-10,-10 0/0:63.359:13:13:482:0:0:0,-3.91339,-10 0/0:84.4309:20:20:681:0:0:0,-6.0206,-10 0/0:90.451:22:22:833:0:0:0,-6.62266,-10 0/0:93.4606:23:23:822:0:0:0,-6.92369,-10 0/0:56.0199:20:19:712:1:16:0,-3.11957,-10 0/0:99:33:33:1184:0:0:0,-9.93399,-10 0/0:54.3281:10:10:348:0:0:0,-3.0103,-10 0/0:66.3693:14:14:530:0:0:0,-4.21442,-10 0/0:84.4309:20:20:724:0:0:0,-6.0206,-10 0/0:30.2457:2:2:74:0:0:0,-0.60206,-7.03 0/0:51.3178:9:9:312:0:0:0,-2.70927,-10 0/0:99:28:28:1046:0:0:0,-8.42884,-10 0/0:99:37:37:1357:0:0:0,-10,-10 0/0:87.441:21:21:766:0:0:0,-6.32163,-10 0/0:93.4606:23:23:854:0:0:0,-6.92369,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:33.256:3:3:90:0:0:0,-0.90309,-8.4 0/0:96.474:24:24:908:0:0:0,-7.22472,-10 0/0:84.4309:20:20:749:0:0:0,-6.0206,-10 0/0:48.3075:8:8:301:0:0:0,-2.40824,-10 0/0:75.4001:17:17:630:0:0:0,-5.11751,-10 0/0:63.359:13:13:490:0:0:0,-3.91339,-10 0/0:69.3795:15:15:527:0:0:0,-4.51545,-10 scaffold_215 1320725 . T C 2319.11 . AB=0.428571;ABP=10.1451;AC=7;AF=0.0380435;AN=184;AO=87;CIGAR=1X;DP=1991;DPB=1991;DPRA=1.41593;EPP=3.03526;EPPR=4.32869;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9007;NS=92;NUMALT=1;ODDS=2.50816;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3174;QR=70562;RO=1904;RPP=191.928;RPPR=4137.49;RUN=1;SAF=44;SAP=3.03526;SAR=43;SRF=969;SRP=4.32869;SRR=935;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.6851:20:20:731:0:0:0,-6.0206,-10 0/0:49.6027:12:12:452:0:0:0,-3.61236,-10 0/0:76.6954:21:21:745:0:0:0,-6.32163,-10 0/0:64.6542:17:17:642:0:0:0,-5.11751,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:46.5924:11:11:418:0:0:0,-3.31133,-10 0/0:99:45:45:1675:0:0:0,-10,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:55.6233:14:14:530:0:0:0,-4.21442,-10 0/0:19.4997:2:2:76:0:0:0,-0.60206,-7.22 0/0:43.5821:10:10:364:0:0:0,-3.0103,-10 0/0:37.5615:8:8:304:0:0:0,-2.40824,-10 0/0:99:43:43:1583:0:0:0,-10,-10 0/0:79.7057:22:22:797:0:0:0,-6.62266,-10 0/0:99:33:33:1242:0:0:0,-9.93399,-10 0/0:88.7368:25:25:949:0:0:0,-7.52575,-10 0/0:99:36:36:1346:0:0:0,-10,-10 0/0:34.5512:7:7:244:0:0:0,-2.10721,-10 0/0:99:36:36:1356:0:0:0,-10,-10 0/0:99:45:45:1655:0:0:0,-10,-10 0/0:64.6542:17:17:622:0:0:0,-5.11751,-10 0/0:99:36:36:1323:0:0:0,-10,-10 0/0:40.5718:9:9:329:0:0:0,-2.70927,-10 0/0:70.6748:19:19:699:0:0:0,-5.71957,-10 0/0:76.6954:21:21:743:0:0:0,-6.32163,-10 0/0:91.7458:26:26:941:0:0:0,-7.82678,-10 0/0:67.6645:18:18:672:0:0:0,-5.41854,-10 0/0:67.6645:18:18:681:0:0:0,-5.41854,-10 0/0:49.6027:12:12:451:0:0:0,-3.61236,-10 0/0:70.6748:19:19:713:0:0:0,-5.71957,-10 0/0:40.5718:9:9:312:0:0:0,-2.70927,-10 0/0:25.5203:4:4:151:0:0:0,-1.20412,-10 0/0:94.7579:27:27:1005:0:0:0,-8.12781,-10 0/0:61.6439:16:16:592:0:0:0,-4.81648,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:43.5821:10:10:375:0:0:0,-3.0103,-10 0/0:49.6027:12:12:452:0:0:0,-3.61236,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:76.6954:21:21:760:0:0:0,-6.32163,-10 0/0:97.763:28:28:1057:0:0:0,-8.42884,-10 0/0:88.7368:25:25:929:0:0:0,-7.52575,-10 0/0:79.7057:22:22:778:0:0:0,-6.62266,-10 0/0:67.6645:18:18:680:0:0:0,-5.41854,-10 0/0:99:44:44:1600:0:0:0,-10,-10 0/0:64.6542:17:17:636:0:0:0,-5.11751,-10 0/1:99:26:14:514:12:456:-10,0,-10 0/1:99:41:27:984:14:525:-10,0,-10 0/1:99:29:17:637:12:421:-10,0,-10 1/1:11.3252:18:0:0:18:648:-10,-5.41854,0 0/0:99:31:31:1165:0:0:0,-9.33193,-10 0/0:49.6027:12:12:429:0:0:0,-3.61236,-10 0/0:94.7579:27:27:952:0:0:0,-8.12781,-10 0/0:64.6542:17:17:633:0:0:0,-5.11751,-10 0/0:25.5203:4:4:152:0:0:0,-1.20412,-10 0/1:99:34:18:664:16:581:-10,0,-10 0/0:58.6336:15:15:559:0:0:0,-4.51545,-10 0/1:99:31:16:596:15:543:-10,0,-10 0/0:70.6748:19:19:678:0:0:0,-5.71957,-10 0/0:70.6748:19:19:718:0:0:0,-5.71957,-10 0/0:67.6645:18:18:641:0:0:0,-5.41854,-10 0/0:99:34:34:1245:0:0:0,-10,-10 0/0:52.613:13:13:492:0:0:0,-3.91339,-10 0/0:99:40:40:1500:0:0:0,-10,-10 0/0:76.6954:21:21:776:0:0:0,-6.32163,-10 0/0:40.5718:9:9:341:0:0:0,-2.70927,-10 0/0:99:35:35:1318:0:0:0,-10,-10 0/0:76.6954:21:21:775:0:0:0,-6.32163,-10 0/0:64.6542:17:17:637:0:0:0,-5.11751,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:34.5512:7:7:266:0:0:0,-2.10721,-10 0/0:49.6027:12:12:443:0:0:0,-3.61236,-10 0/0:99:33:33:1237:0:0:0,-9.93399,-10 0/0:97.763:28:28:1057:0:0:0,-8.42884,-10 0/0:61.6439:16:16:603:0:0:0,-4.81648,-10 0/0:76.6954:21:21:783:0:0:0,-6.32163,-10 0/0:46.5924:11:11:417:0:0:0,-3.31133,-10 0/0:85.7264:24:24:894:0:0:0,-7.22472,-10 0/0:73.6851:20:20:736:0:0:0,-6.0206,-10 0/0:28.5306:5:5:189:0:0:0,-1.50515,-10 0/0:55.6233:14:14:528:0:0:0,-4.21442,-10 0/0:99:34:34:1264:0:0:0,-10,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:99:29:29:1099:0:0:0,-8.72987,-10 0/0:85.7264:24:24:903:0:0:0,-7.22472,-10 0/0:70.6748:19:19:700:0:0:0,-5.71957,-10 0/0:40.5718:9:9:318:0:0:0,-2.70927,-10 0/0:79.7057:22:22:836:0:0:0,-6.62266,-10 0/0:55.6233:14:14:531:0:0:0,-4.21442,-10 0/0:28.5306:5:5:190:0:0:0,-1.50515,-10 0/0:82.7161:23:23:870:0:0:0,-6.92369,-10 0/0:91.7458:26:26:955:0:0:0,-7.82678,-10 0/0:82.7161:23:23:870:0:0:0,-6.92369,-10 scaffold_222 97669 . G T 243.27 . AB=0.272727;ABP=22.751;AC=2;AF=0.0108696;AN=184;AO=13;CIGAR=1X;DP=1560;DPB=1560;DPRA=1.47734;EPP=3.17734;EPPR=9.70181;GTI=0;LEN=1;MEANALT=1;MQM=54;MQMR=59.8071;NS=92;NUMALT=1;ODDS=10.9469;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=464;QR=56135;RO=1545;RPP=31.2394;RPPR=3357.94;RUN=1;SAF=7;SAP=3.17734;SAR=6;SRF=738;SRP=9.70181;SRR=807;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:92.6964:18:18:680:0:0:0,-5.41854,-10 0/0:80.6551:14:14:530:0:0:0,-4.21442,-10 0/0:99:24:24:810:0:0:0,-7.22472,-10 0/0:77.6449:13:13:458:0:0:0,-3.91339,-10 0/0:71.6243:11:11:396:0:0:0,-3.31133,-10 0/0:99:21:21:764:0:0:0,-6.32163,-10 0/0:99:29:29:1095:0:0:0,-8.72987,-10 0/0:99:31:31:1090:0:0:0,-9.33193,-10 0/0:59.5831:7:7:243:0:0:0,-2.10721,-10 0/0:47.5419:3:3:114:0:0:0,-0.90309,-10 0/0:62.5934:8:8:290:0:0:0,-2.40824,-10 0/0:65.6037:9:9:304:0:0:0,-2.70927,-10 0/0:99:22:22:771:0:0:0,-6.62266,-10 0/0:92.6964:19:18:629:0:0:0,-5.41854,-10 0/0:99:29:29:1047:0:0:0,-8.72987,-10 0/0:99:21:21:755:0:0:0,-6.32163,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:50.5522:4:4:152:0:0:0,-1.20412,-10 0/0:92.6964:18:18:651:0:0:0,-5.41854,-10 0/0:99:29:29:1012:0:0:0,-8.72987,-10 0/0:65.6037:9:9:342:0:0:0,-2.70927,-10 0/0:99:24:24:896:0:0:0,-7.22472,-10 0/0:59.5831:7:7:254:0:0:0,-2.10721,-10 0/0:89.6861:17:17:637:0:0:0,-5.11751,-10 0/0:80.6551:14:14:494:0:0:0,-4.21442,-10 0/0:99:23:23:819:0:0:0,-6.92369,-10 0/0:98.7168:20:20:748:0:0:0,-6.0206,-10 0/0:89.6861:17:17:619:0:0:0,-5.11751,-10 0/0:77.6449:13:13:455:0:0:0,-3.91339,-10 0/0:99:33:33:1158:0:0:0,-9.93399,-10 0/0:62.5934:8:8:286:0:0:0,-2.40824,-10 0/0:50.5522:4:4:148:0:0:0,-1.20412,-10 0/0:86.6754:16:16:569:0:0:0,-4.81648,-10 0/0:89.6861:17:17:599:0:0:0,-5.11751,-10 0/0:95.7066:19:19:687:0:0:0,-5.71957,-10 0/0:62.5934:8:8:281:0:0:0,-2.40824,-10 0/0:86.6754:16:16:603:0:0:0,-4.81648,-10 0/0:99:27:27:1004:0:0:0,-8.12781,-10 0/0:71.6243:11:11:396:0:0:0,-3.31133,-10 0/0:83.6655:15:15:533:0:0:0,-4.51545,-10 0/0:99:31:31:1145:0:0:0,-9.33193,-10 0/0:95.7066:19:19:695:0:0:0,-5.71957,-10 0/0:83.6655:15:15:563:0:0:0,-4.51545,-10 0/0:99:26:26:955:0:0:0,-7.82678,-10 0/0:92.6964:18:18:641:0:0:0,-5.41854,-10 0/0:65.6037:9:9:331:0:0:0,-2.70927,-10 0/0:99:37:37:1370:0:0:0,-10,-10 0/0:86.6754:16:16:603:0:0:0,-4.81648,-10 0/0:89.6861:17:17:626:0:0:0,-5.11751,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:59.5831:7:7:255:0:0:0,-2.10721,-10 0/0:99:31:31:1096:0:0:0,-9.33193,-10 0/0:74.6346:12:12:439:0:0:0,-3.61236,-10 0/0:53.5625:5:5:188:0:0:0,-1.50515,-10 0/0:99:36:36:1298:0:0:0,-10,-10 0/0:80.6551:14:14:518:0:0:0,-4.21442,-10 0/0:99:21:21:771:0:0:0,-6.32163,-10 0/0:68.614:10:10:368:0:0:0,-3.0103,-10 0/0:77.6449:14:13:476:0:0:0,-3.91339,-10 0/0:53.5625:5:5:190:0:0:0,-1.50515,-10 0/1:99:31:24:907:7:261:-10,0,-10 0/0:62.5934:8:8:295:0:0:0,-2.40824,-10 0/0:99:28:28:1039:0:0:0,-8.42884,-10 0/1:99:13:8:291:5:187:-10,0,-10 0/0:65.6037:9:9:332:0:0:0,-2.70927,-10 0/0:89.6861:17:17:627:0:0:0,-5.11751,-10 0/0:99:24:24:884:0:0:0,-7.22472,-10 0/0:65.6037:9:9:338:0:0:0,-2.70927,-10 0/0:86.6754:16:16:585:0:0:0,-4.81648,-10 0/0:80.6551:14:14:529:0:0:0,-4.21442,-10 0/0:83.6655:15:15:558:0:0:0,-4.51545,-10 0/0:99:22:22:808:0:0:0,-6.62266,-10 0/0:86.6754:16:16:575:0:0:0,-4.81648,-10 0/0:83.6655:15:15:542:0:0:0,-4.51545,-10 0/0:98.7933:30:29:1034:1:16:0,-5.95378,-10 0/0:62.5934:8:8:278:0:0:0,-2.40824,-10 0/0:65.6037:9:9:335:0:0:0,-2.70927,-10 0/0:74.6346:12:12:440:0:0:0,-3.61236,-10 0/0:56.5728:6:6:224:0:0:0,-1.80618,-10 0/0:74.6346:12:12:455:0:0:0,-3.61236,-10 0/0:99:28:28:941:0:0:0,-8.42884,-10 0/0:99:30:30:1071:0:0:0,-9.0309,-10 0/0:99:24:24:892:0:0:0,-7.22472,-10 0/0:99:22:22:829:0:0:0,-6.62266,-10 0/0:71.6243:11:11:417:0:0:0,-3.31133,-10 0/0:56.5728:6:6:228:0:0:0,-1.80618,-10 0/0:68.614:10:10:374:0:0:0,-3.0103,-10 0/0:80.6551:14:14:480:0:0:0,-4.21442,-10 0/0:56.5728:6:6:203:0:0:0,-1.80618,-10 0/0:95.7066:19:19:662:0:0:0,-5.71957,-10 0/0:95.7066:19:19:695:0:0:0,-5.71957,-10 0/0:68.614:10:10:367:0:0:0,-3.0103,-10 scaffold_222 296689 . C T 875.223 . AB=0.614035;ABP=9.44853;AC=3;AF=0.0163043;AN=184;AO=37;CIGAR=1X;DP=1822;DPB=1822;DPRA=0.904157;EPP=7.76406;EPPR=5.05755;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9007;NS=92;NUMALT=1;ODDS=3.6563;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1353;QR=65329;RO=1783;RPP=83.3548;RPPR=3840.08;RUN=1;SAF=14;SAP=7.76406;SAR=23;SRF=867;SRP=5.93442;SRR=916;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:77.4544:19:19:707:0:0:0,-5.71957,-10 0/0:50.3618:10:10:380:0:0:0,-3.0103,-10 0/0:92.5057:24:24:877:0:0:0,-7.22472,-10 0/0:80.4648:20:20:724:0:0:0,-6.0206,-10 0/0:47.3515:9:9:317:0:0:0,-2.70927,-10 0/1:0.00155253:10:0:0:10:376:-10,-3.0103,0 0/0:99:42:42:1530:0:0:0,-10,-10 0/0:77.4544:19:19:685:0:0:0,-5.71957,-10 0/0:53.3721:11:11:415:0:0:0,-3.31133,-10 0/0:26.2794:2:2:76:0:0:0,-0.60206,-7.22 0/0:26.2794:2:2:76:0:0:0,-0.60206,-7.22 0/0:41.3309:7:7:253:0:0:0,-2.10721,-10 0/0:86.4849:22:22:810:0:0:0,-6.62266,-10 0/0:99:40:40:1460:0:0:0,-10,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:74.4442:18:18:657:0:0:0,-5.41854,-10 0/0:41.3309:7:7:266:0:0:0,-2.10721,-10 0/0:62.403:14:14:504:0:0:0,-4.21442,-10 0/0:99:44:44:1575:0:0:0,-10,-10 0/0:68.4236:16:16:580:0:0:0,-4.81648,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:38.3206:6:6:228:0:0:0,-1.80618,-10 0/0:68.4236:16:16:583:0:0:0,-4.81648,-10 0/0:99:27:27:974:0:0:0,-8.12781,-10 0/0:99:31:31:1090:0:0:0,-9.33193,-10 0/0:29.2305:20:19:677:1:38:0,-0.91957,-10 0/0:71.4339:17:17:629:0:0:0,-5.11751,-10 0/0:83.4748:21:21:761:0:0:0,-6.32163,-10 0/0:99:44:44:1633:0:0:0,-10,-10 0/0:53.3721:11:11:412:0:0:0,-3.31133,-10 0/0:62.403:14:14:528:0:0:0,-4.21442,-10 0/0:56.3824:12:12:449:0:0:0,-3.61236,-10 0/0:41.3309:7:7:244:0:0:0,-2.10721,-10 0/0:65.4133:15:15:543:0:0:0,-4.51545,-10 0/0:44.3412:8:8:295:0:0:0,-2.40824,-10 0/0:47.3515:9:9:335:0:0:0,-2.70927,-10 0/0:99:29:28:1043:0:0:0,-8.42884,-10 0/0:56.3824:12:12:427:0:0:0,-3.61236,-10 0/0:47.3515:9:9:320:0:0:0,-2.70927,-10 0/0:99:32:32:1199:0:0:0,-9.63296,-10 0/0:83.4748:21:21:790:0:0:0,-6.32163,-10 0/0:71.4339:17:17:646:0:0:0,-5.11751,-10 0/0:99:46:46:1669:0:0:0,-10,-10 0/0:89.4956:23:23:866:0:0:0,-6.92369,-10 0/0:68.4236:16:16:556:0:0:0,-4.81648,-10 0/0:99:43:42:1548:0:0:0,-10,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:68.4236:16:16:608:0:0:0,-4.81648,-10 0/0:99:45:45:1603:0:0:0,-10,-10 0/0:53.3721:11:11:407:0:0:0,-3.31133,-10 0/0:99:33:33:1183:0:0:0,-9.93399,-10 0/0:92.5057:24:24:885:0:0:0,-7.22472,-10 0/0:35.3103:5:5:190:0:0:0,-1.50515,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:53.3721:11:11:418:0:0:0,-3.31133,-10 0/0:86.4849:22:22:817:0:0:0,-6.62266,-10 0/0:35.3103:5:5:180:0:0:0,-1.50515,-10 0/0:68.4236:16:16:584:0:0:0,-4.81648,-10 0/0:65.4133:15:15:547:0:0:0,-4.51545,-10 0/0:99:41:41:1492:0:0:0,-10,-10 0/0:56.3824:12:12:442:0:0:0,-3.61236,-10 0/0:99:37:37:1394:0:0:0,-10,-10 0/0:83.4748:21:21:750:0:0:0,-6.32163,-10 0/0:62.403:14:14:510:0:0:0,-4.21442,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:83.4748:21:21:752:0:0:0,-6.32163,-10 0/0:41.3309:7:7:244:0:0:0,-2.10721,-10 0/0:99:45:45:1698:0:0:0,-10,-10 0/0:29.2897:3:3:85:0:0:0,-0.90309,-7.93333 0/0:53.3721:11:11:394:0:0:0,-3.31133,-10 0/1:99:25:10:373:15:543:-10,0,-10 0/1:99:22:12:456:10:364:-10,0,-10 0/0:65.4133:15:15:558:0:0:0,-4.51545,-10 0/0:99:38:38:1399:0:0:0,-10,-10 0/0:47.3515:9:9:320:0:0:0,-2.70927,-10 0/0:50.3618:10:10:373:0:0:0,-3.0103,-10 0/0:56.3824:12:12:432:0:0:0,-3.61236,-10 0/0:41.3309:7:7:257:0:0:0,-2.10721,-10 0/0:65.4133:15:15:532:0:0:0,-4.51545,-10 0/0:99:27:27:965:0:0:0,-8.12781,-10 0/0:95.5157:25:25:950:0:0:0,-7.52575,-10 0/0:99:33:33:1202:0:0:0,-9.93399,-10 0/0:86.4849:22:22:766:0:0:0,-6.62266,-10 0/0:99:30:30:1074:0:0:0,-9.0309,-10 0/0:35.3103:5:5:188:0:0:0,-1.50515,-10 0/0:71.4339:17:17:641:0:0:0,-5.11751,-10 0/0:89.4956:23:23:866:0:0:0,-6.92369,-10 0/0:47.3515:9:9:329:0:0:0,-2.70927,-10 0/0:50.3618:10:10:375:0:0:0,-3.0103,-10 0/0:0.109732:13:12:430:1:32:-0.400553,0,-10 0/0:62.403:14:14:526:0:0:0,-4.21442,-10 scaffold_222 296700 . C A 2457.88 . AB=0.528;ABP=3.86152;AC=6;AF=0.0326087;AN=184;AO=93;CIGAR=1X;DP=1819;DPB=1819;DPRA=1.58656;EPP=4.90158;EPPR=6.81824;GTI=0;LEN=1;MEANALT=1;MQM=59.7527;MQMR=59.9026;NS=92;NUMALT=1;ODDS=0.598069;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3351;QR=62893;RO=1725;RPP=204.957;RPPR=3748.8;RUN=1;SAF=42;SAP=4.90158;SAR=51;SRF=835;SRP=6.81824;SRR=890;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.1654:19:19:708:0:0:0,-5.71957,-10 0/0:31.0727:10:10:347:0:0:0,-3.0103,-10 0/0:73.2169:24:24:876:0:0:0,-7.22472,-10 0/0:61.1757:20:20:703:0:0:0,-6.0206,-10 0/0:28.0624:9:9:306:0:0:0,-2.70927,-10 0/0:31.0727:10:10:378:0:0:0,-3.0103,-10 0/0:99:42:42:1545:0:0:0,-10,-10 0/0:58.1654:19:19:697:0:0:0,-5.71957,-10 0/0:34.083:11:11:412:0:0:0,-3.31133,-10 0/0:6.99029:2:2:76:0:0:0,-0.60206,-7.22 0/0:6.99029:2:2:53:0:0:0,-0.60206,-5.035 0/0:22.0418:7:7:260:0:0:0,-2.10721,-10 0/1:99:22:10:380:12:401:-10,0,-10 0/0:99:40:40:1435:0:0:0,-10,-10 0/0:85.258:28:28:1019:0:0:0,-8.42884,-10 0/0:94.288:31:31:1093:0:0:0,-9.33193,-10 0/1:99:18:7:265:11:389:-10,0,-10 0/0:22.0418:7:7:236:0:0:0,-2.10721,-10 0/0:43.1139:14:14:532:0:0:0,-4.21442,-10 0/0:99:44:44:1630:0:0:0,-10,-10 0/0:49.1345:16:16:589:0:0:0,-4.81648,-10 0/0:99:37:37:1370:0:0:0,-10,-10 0/0:19.0315:6:6:226:0:0:0,-1.80618,-10 0/0:49.1345:16:16:603:0:0:0,-4.81648,-10 1/1:60.2496:27:0:0:27:999:-10,-8.12781,0 0/0:94.288:31:31:1108:0:0:0,-9.33193,-10 0/0:61.1757:20:20:695:0:0:0,-6.0206,-10 0/0:52.1448:17:17:614:0:0:0,-5.11751,-10 0/0:64.186:21:21:735:0:0:0,-6.32163,-10 0/0:99:44:44:1600:0:0:0,-10,-10 0/0:34.083:11:11:391:0:0:0,-3.31133,-10 0/0:43.1139:14:14:526:0:0:0,-4.21442,-10 0/0:37.0933:12:12:456:0:0:0,-3.61236,-10 0/0:22.0418:7:7:264:0:0:0,-2.10721,-10 0/0:46.1242:15:15:529:0:0:0,-4.51545,-10 0/0:25.0521:8:8:297:0:0:0,-2.40824,-10 0/0:28.0624:9:9:342:0:0:0,-2.70927,-10 0/0:88.2681:29:29:1059:0:0:0,-8.72987,-10 0/0:37.0933:12:12:453:0:0:0,-3.61236,-10 0/0:28.0624:9:9:340:0:0:0,-2.70927,-10 0/0:97.2919:32:32:1165:0:0:0,-9.63296,-10 0/0:64.186:21:21:762:0:0:0,-6.32163,-10 0/0:52.1448:17:17:631:0:0:0,-5.11751,-10 0/0:99:46:45:1611:0:0:0,-10,-10 0/0:70.2066:23:23:841:0:0:0,-6.92369,-10 0/0:49.1345:16:16:564:0:0:0,-4.81648,-10 0/0:99:43:43:1562:0:0:0,-10,-10 0/0:85.258:28:28:1047:0:0:0,-8.42884,-10 0/0:49.1345:16:16:599:0:0:0,-4.81648,-10 0/1:99:45:22:801:23:841:-10,0,-10 0/0:34.083:11:11:407:0:0:0,-3.31133,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:73.2169:24:24:889:0:0:0,-7.22472,-10 0/0:16.0212:5:5:187:0:0:0,-1.50515,-10 0/0:82.2477:27:27:984:0:0:0,-8.12781,-10 0/0:31.0727:10:10:354:0:0:0,-3.0103,-10 0/0:67.1963:22:22:812:0:0:0,-6.62266,-10 0/0:16.0212:5:5:177:0:0:0,-1.50515,-10 0/0:49.1345:16:16:595:0:0:0,-4.81648,-10 0/0:46.1242:15:15:540:0:0:0,-4.51545,-10 0/1:99:40:20:749:20:721:-10,0,-10 0/0:37.0933:12:12:429:0:0:0,-3.61236,-10 0/0:99:37:37:1364:0:0:0,-10,-10 0/0:64.186:21:21:737:0:0:0,-6.32163,-10 0/0:43.1139:14:14:509:0:0:0,-4.21442,-10 0/0:99:33:33:1181:0:0:0,-9.93399,-10 0/0:64.186:21:21:735:0:0:0,-6.32163,-10 0/0:22.0418:7:7:262:0:0:0,-2.10721,-10 0/0:99:44:44:1610:0:0:0,-10,-10 0/0:10.0006:3:3:111:0:0:0,-0.90309,-10 0/0:34.083:11:11:409:0:0:0,-3.31133,-10 0/0:76.2272:25:25:928:0:0:0,-7.52575,-10 0/0:67.1963:22:22:797:0:0:0,-6.62266,-10 0/0:46.1242:15:15:521:0:0:0,-4.51545,-10 0/0:99:38:38:1413:0:0:0,-10,-10 0/0:28.0624:9:9:333:0:0:0,-2.70927,-10 0/0:31.0727:10:10:380:0:0:0,-3.0103,-10 0/0:37.0933:12:12:440:0:0:0,-3.61236,-10 0/0:22.0418:7:7:231:0:0:0,-2.10721,-10 0/0:46.1242:15:15:543:0:0:0,-4.51545,-10 0/0:82.2477:27:27:986:0:0:0,-8.12781,-10 0/0:76.2272:25:25:944:0:0:0,-7.52575,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:67.1963:22:22:817:0:0:0,-6.62266,-10 0/0:91.2782:30:30:1094:0:0:0,-9.0309,-10 0/0:16.0212:5:5:190:0:0:0,-1.50515,-10 0/0:52.1448:17:17:641:0:0:0,-5.11751,-10 0/0:70.2066:23:23:847:0:0:0,-6.92369,-10 0/0:28.0624:9:9:308:0:0:0,-2.70927,-10 0/0:31.0727:10:10:357:0:0:0,-3.0103,-10 0/0:40.1036:13:13:461:0:0:0,-3.91339,-10 0/0:43.1139:14:14:484:0:0:0,-4.21442,-10 scaffold_222 360908 . G A 10003.5 . AB=0.478664;ABP=5.14149;AC=33;AF=0.179348;AN=184;AO=362;CIGAR=1X;DP=1924;DPB=1924;DPRA=1.24547;EPP=5.91359;EPPR=23.4032;GTI=3;LEN=1;MEANALT=1.03704;MQM=59.8867;MQMR=59.95;NS=92;NUMALT=1;ODDS=0.196442;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=13228;QR=57394;RO=1559;RPP=789.083;RPPR=3388.34;RUN=1;SAF=170;SAP=5.91359;SAR=192;SRF=719;SRP=23.4032;SRR=840;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:38.6892:16:14:527:2:74:-4.2927,0,-10 0/0:35.7962:8:8:275:0:0:0,-2.40824,-10 0/0:77.9404:22:22:827:0:0:0,-6.62266,-10 0/0:44.8271:11:11:409:0:0:0,-3.31133,-10 0/0:50.8477:13:13:460:0:0:0,-3.91339,-10 0/0:35.7962:8:8:299:0:0:0,-2.40824,-10 0/0:99:39:39:1448:0:0:0,-10,-10 0/0:77.9404:22:22:806:0:0:0,-6.62266,-10 0/0:26.7653:5:5:187:0:0:0,-1.50515,-10 0/0:26.7653:5:5:180:0:0:0,-1.50515,-10 0/0:17.7344:2:2:76:0:0:0,-0.60206,-7.22 0/0:26.7653:5:5:144:0:0:0,-1.50515,-10 0/1:99:28:19:671:9:338:-10,0,-10 0/0:99:40:40:1457:0:0:0,-10,-10 0/1:99:27:16:575:11:400:-10,0,-10 0/1:99:36:18:673:18:648:-10,0,-10 0/0:77.9404:23:22:800:0:0:0,-6.62266,-10 1/1:17.7594:8:0:0:8:302:-10,-2.40824,0 0/0:62.8889:17:17:633:0:0:0,-5.11751,-10 0/0:99:43:43:1571:0:0:0,-10,-10 0/0:92.9904:27:27:1002:0:0:0,-8.12781,-10 0/1:99:35:21:778:13:493:-10,0,-10 0/1:0.974431:5:0:0:5:190:-10,-1.50515,0 0/0:0.979674:14:13:438:1:38:-0.731708,0,-10 0/0:83.9611:24:24:887:0:0:0,-7.22472,-10 0/0:99:34:34:1261:0:0:0,-10,-10 0/0:68.9095:19:19:715:0:0:0,-5.71957,-10 0/0:41.8168:10:10:380:0:0:0,-3.0103,-10 1/1:68.9345:25:0:0:25:925:-10,-7.52575,0 0/0:99:38:38:1370:0:0:0,-10,-10 0/1:0.974431:5:0:0:5:190:-10,-1.50515,0 0/0:53.858:14:14:519:0:0:0,-4.21442,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 1/1:50.8727:19:0:0:19:697:-10,-5.71957,0 0/0:56.8683:15:15:562:0:0:0,-4.51545,-10 0/0:53.858:14:14:500:0:0:0,-4.21442,-10 0/0:35.7962:8:8:304:0:0:0,-2.40824,-10 0/1:99:30:12:448:18:681:-10,0,-10 0/0:53.858:14:14:526:0:0:0,-4.21442,-10 0/1:99:19:5:177:14:506:-10,0,-10 0/0:95.9992:28:28:1050:0:0:0,-8.42884,-10 0/0:77.9404:22:22:809:0:0:0,-6.62266,-10 0/0:65.8992:18:18:671:0:0:0,-5.41854,-10 0/1:99:47:31:1170:16:555:-10,0,-10 0/1:99:20:9:341:11:416:-10,0,-10 0/1:99:15:10:322:5:168:-10,0,-10 0/1:99:44:26:981:18:625:-10,0,-10 0/1:99:28:14:527:14:509:-10,0,-10 1/1:26.7903:11:0:0:11:414:-10,-3.31133,0 0/0:99:46:46:1602:0:0:0,-10,-10 0/0:53.858:14:14:532:0:0:0,-4.21442,-10 0/1:99:47:19:687:28:1030:-10,0,-10 0/0:68.9095:19:19:707:0:0:0,-5.71957,-10 0/0:14.7241:1:1:38:0:0:0,-0.30103,-3.8 0/0:99:45:45:1656:0:0:0,-10,-10 1/1:29.8006:12:0:0:12:408:-10,-3.61236,0 0/1:99:27:14:525:13:487:-10,0,-10 1/1:11.7388:6:0:0:6:206:-10,-1.80618,0 0/0:74.9301:21:21:776:0:0:0,-6.32163,-10 0/0:56.8683:15:15:563:0:0:0,-4.51545,-10 0/0:99:29:29:1085:0:0:0,-8.72987,-10 1/1:59.9036:22:0:0:22:804:-10,-6.62266,0 0/0:99:43:43:1574:0:0:0,-10,-10 0/0:80.9506:23:23:869:0:0:0,-6.92369,-10 0/0:47.8374:12:12:449:0:0:0,-3.61236,-10 0/0:99:34:34:1276:0:0:0,-10,-10 0/0:59.8786:16:16:600:0:0:0,-4.81648,-10 0/0:35.7962:8:8:300:0:0:0,-2.40824,-10 0/1:99:35:13:487:22:790:-10,0,-10 0/0:53.858:14:14:525:0:0:0,-4.21442,-10 0/0:74.9301:21:21:779:0:0:0,-6.32163,-10 0/0:99:45:45:1630:0:0:0,-10,-10 0/0:99:34:33:1247:0:0:0,-9.93399,-10 0/0:50.8477:13:13:469:0:0:0,-3.91339,-10 0/0:89.9809:26:26:977:0:0:0,-7.82678,-10 0/0:35.7962:8:8:301:0:0:0,-2.40824,-10 0/0:56.8683:15:15:484:0:0:0,-4.51545,-10 0/0:47.8374:12:12:452:0:0:0,-3.61236,-10 0/0:32.7859:7:7:243:0:0:0,-2.10721,-10 0/0:47.8374:12:12:432:0:0:0,-3.61236,-10 0/1:99:50:30:1108:20:735:-10,0,-10 0/0:86.971:25:25:913:0:0:0,-7.52575,-10 0/0:74.9301:21:21:771:0:0:0,-6.32163,-10 0/0:77.9404:22:22:835:0:0:0,-6.62266,-10 0/1:99:25:9:333:16:599:-10,0,-10 0/0:38.8065:9:9:339:0:0:0,-2.70927,-10 0/0:47.8374:12:12:443:0:0:0,-3.61236,-10 0/0:56.8683:15:15:565:0:0:0,-4.51545,-10 0/0:23.755:4:4:142:0:0:0,-1.20412,-10 0/0:53.858:14:14:532:0:0:0,-4.21442,-10 0/0:68.9095:19:19:700:0:0:0,-5.71957,-10 0/0:62.8889:17:17:620:0:0:0,-5.11751,-10 scaffold_222 398774 . C T 12568.2 . AB=0.51;ABP=3.44459;AC=38;AF=0.206522;AN=184;AO=445;CIGAR=1X;DP=2270;DPB=2270;DPRA=1.05134;EPP=5.16225;EPPR=5.87026;GTI=2;LEN=1;MEANALT=1;MQM=59.8607;MQMR=59.9572;NS=92;NUMALT=1;ODDS=1.53669;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=16318;QR=66905;RO=1823;RPP=969.316;RPPR=3961.6;RUN=1;SAF=212;SAP=5.16225;SAR=233;SRF=887;SRP=5.87026;SRR=936;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:96.0346:29:29:1071:0:0:0,-8.72987,-10 0/0:41.851:11:11:415:0:0:0,-3.31133,-10 0/0:83.9951:25:25:923:0:0:0,-7.52575,-10 0/0:38.8407:10:10:368:0:0:0,-3.0103,-10 0/0:53.8922:15:15:541:0:0:0,-4.51545,-10 0/0:29.8098:7:7:262:0:0:0,-2.10721,-10 0/0:99:53:53:1964:0:0:0,-10,-10 0/0:90.0144:27:27:989:0:0:0,-8.12781,-10 0/0:96.0346:29:29:1049:0:0:0,-8.72987,-10 0/1:0.0996474:4:0:0:4:152:-10,-1.20412,0 1/1:8.66784:10:0:0:10:356:-10,-3.0103,0 0/0:14.7583:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/1:99:40:26:951:14:508:-10,0,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:96.0346:29:29:1090:0:0:0,-8.72987,-10 0/0:83.9951:25:25:909:0:0:0,-7.52575,-10 0/0:50.8819:14:14:525:0:0:0,-4.21442,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/1:99:44:20:744:24:854:-10,0,-10 0/0:62.9231:18:18:677:0:0:0,-5.41854,-10 0/0:99:36:35:1277:0:0:0,-10,-10 0/0:53.8922:15:15:544:0:0:0,-4.51545,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:99:31:31:1121:0:0:0,-9.33193,-10 0/0:90.0144:27:27:1006:0:0:0,-8.12781,-10 0/0:71.954:21:21:765:0:0:0,-6.32163,-10 0/0:41.851:11:11:391:0:0:0,-3.31133,-10 0/0:65.9334:19:19:712:0:0:0,-5.71957,-10 0/0:99:43:43:1557:0:0:0,-10,-10 0/0:50.8819:14:14:522:0:0:0,-4.21442,-10 0/0:62.9231:18:18:678:0:0:0,-5.41854,-10 0/0:96.0346:29:29:1029:0:0:0,-8.72987,-10 1/1:26.7296:16:0:0:16:606:-10,-4.81648,0 0/0:74.9643:22:22:788:0:0:0,-6.62266,-10 0/0:41.851:11:11:406:0:0:0,-3.31133,-10 0/0:56.9025:16:16:588:0:0:0,-4.81648,-10 0/1:99:27:10:380:17:614:-10,0,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/1:99:17:8:304:9:328:-10,0,-10 0/0:99:47:47:1705:0:0:0,-10,-10 0/0:53.8922:15:15:546:0:0:0,-4.51545,-10 0/0:80.9849:24:24:884:0:0:0,-7.22472,-10 0/1:99:31:20:734:11:418:-10,0,-10 0/0:93.0232:28:28:1029:0:0:0,-8.42884,-10 0/0:47.8716:13:13:470:0:0:0,-3.91339,-10 0/0:99:64:64:2405:0:0:0,-10,-10 0/0:83.9951:25:25:941:0:0:0,-7.52575,-10 0/0:71.954:21:21:759:0:0:0,-6.32163,-10 0/0:99:51:51:1799:0:0:0,-10,-10 0/0:53.8922:15:15:559:0:0:0,-4.51545,-10 0/0:99:44:44:1610:0:0:0,-10,-10 0/0:68.9437:20:20:717:0:0:0,-6.0206,-10 0/0:35.8304:9:9:342:0:0:0,-2.70927,-10 0/0:99:48:48:1731:0:0:0,-10,-10 0/0:87.0053:26:26:954:0:0:0,-7.82678,-10 0/0:80.9849:24:24:904:0:0:0,-7.22472,-10 0/0:53.8922:16:15:564:0:0:0,-4.51545,-10 1/1:26.7296:16:0:0:16:601:-10,-4.81648,0 1/1:26.7296:16:0:0:16:569:-10,-4.81648,0 0/1:99:38:20:744:18:660:-10,0,-10 1/1:50.812:24:0:0:24:882:-10,-7.22472,0 0/1:99:51:26:948:25:900:-10,0,-10 0/0:80.9849:24:24:894:0:0:0,-7.22472,-10 0/0:62.9231:18:18:654:0:0:0,-5.41854,-10 0/1:99:37:15:558:22:828:-10,0,-10 0/1:99:24:11:415:13:494:-10,0,-10 0/0:83.9951:25:25:940:0:0:0,-7.52575,-10 0/1:99:42:19:703:23:832:-10,0,-10 0/0:56.9025:16:16:595:0:0:0,-4.81648,-10 0/0:71.954:21:21:700:0:0:0,-6.32163,-10 0/0:93.0232:28:28:1010:0:0:0,-8.42884,-10 0/0:99:36:36:1345:0:0:0,-10,-10 0/0:71.954:21:21:767:0:0:0,-6.32163,-10 0/0:99:39:39:1408:0:0:0,-10,-10 0/0:87.0053:26:26:941:0:0:0,-7.82678,-10 1/1:35.7605:19:0:0:19:705:-10,-5.71957,0 0/0:41.851:11:11:413:0:0:0,-3.31133,-10 0/0:35.8304:9:9:341:0:0:0,-2.70927,-10 1/1:11.6781:11:0:0:11:418:-10,-3.31133,0 0/1:99:51:24:879:27:993:-10,0,-10 0/1:99:36:17:642:19:703:-10,0,-10 0/1:99:27:15:539:12:453:-10,0,-10 1/1:59.8429:27:0:0:27:939:-10,-8.12781,0 0/1:99:27:14:521:13:494:-10,0,-10 0/0:20.7789:4:4:147:0:0:0,-1.20412,-10 0/0:77.9746:23:23:866:0:0:0,-6.92369,-10 0/0:56.9025:16:16:592:0:0:0,-4.81648,-10 0/1:0.0996474:4:0:0:4:152:-10,-1.20412,0 1/1:32.7502:18:0:0:18:650:-10,-5.41854,0 1/1:11.6781:11:0:0:11:396:-10,-3.31133,0 1/1:44.7914:22:0:0:22:813:-10,-6.62266,0 scaffold_222 421058 . G A 463.126 . AB=0.527778;ABP=3.25157;AC=2;AF=0.010989;AN=182;AO=21;CIGAR=1X;DP=1264;DPB=1264;DPRA=1.14092;EPP=3.94093;EPPR=4.47949;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9228;NS=91;NUMALT=1;ODDS=2.27095;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=746;QR=45717;RO=1243;RPP=48.6112;RPPR=2702.15;RUN=1;SAF=9;SAP=3.94093;SAR=12;SRF=636;SRP=4.47949;SRR=607;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:34.7954:5:5:190:0:0:0,-1.50515,-10 0/0:37.8057:6:6:219:0:0:0,-1.80618,-10 0/0:61.8881:14:14:530:0:0:0,-4.21442,-10 0/0:70.919:17:17:626:0:0:0,-5.11751,-10 0/0:55.8675:12:12:447:0:0:0,-3.61236,-10 0/0:34.7954:5:5:186:0:0:0,-1.50515,-10 0/0:79.9499:20:20:741:0:0:0,-6.0206,-10 0/0:88.9807:23:23:812:0:0:0,-6.92369,-10 0/0:34.7954:5:5:180:0:0:0,-1.50515,-10 .:.:.:.:.:.:.:. 0/0:25.7645:2:2:76:0:0:0,-0.60206,-7.22 0/0:31.7851:4:4:147:0:0:0,-1.20412,-10 0/0:95.0011:25:25:924:0:0:0,-7.52575,-10 0/0:82.9602:21:21:797:0:0:0,-6.32163,-10 0/0:85.9703:22:22:818:0:0:0,-6.62266,-10 0/0:88.9807:23:23:849:0:0:0,-6.92369,-10 0/0:67.9087:16:16:608:0:0:0,-4.81648,-10 0/0:37.8057:6:6:228:0:0:0,-1.80618,-10 0/0:70.919:17:17:631:0:0:0,-5.11751,-10 0/0:85.9703:22:22:830:0:0:0,-6.62266,-10 0/0:98.0111:26:26:957:0:0:0,-7.82678,-10 0/0:73.9293:18:18:629:0:0:0,-5.41854,-10 0/0:40.816:7:7:260:0:0:0,-2.10721,-10 0/0:61.8881:14:14:522:0:0:0,-4.21442,-10 0/0:79.9499:20:20:725:0:0:0,-6.0206,-10 0/0:43.8263:8:8:298:0:0:0,-2.40824,-10 0/0:64.8984:15:15:570:0:0:0,-4.51545,-10 0/0:40.816:7:7:266:0:0:0,-2.10721,-10 0/0:46.8366:9:9:333:0:0:0,-2.70927,-10 0/0:64.8984:15:15:556:0:0:0,-4.51545,-10 0/0:28.7748:3:3:114:0:0:0,-0.90309,-10 0/0:40.816:7:7:266:0:0:0,-2.10721,-10 0/0:55.8675:12:12:452:0:0:0,-3.61236,-10 0/0:70.919:17:17:635:0:0:0,-5.11751,-10 0/0:45.2872:16:15:562:1:15:0,-2.11236,-10 0/0:22.7542:1:1:25:0:0:0,-0.30103,-2.5 0/0:58.8778:13:13:469:0:0:0,-3.91339,-10 0/0:64.8984:15:15:534:0:0:0,-4.51545,-10 0/0:55.8675:12:12:455:0:0:0,-3.61236,-10 0/0:61.8881:14:14:481:0:0:0,-4.21442,-10 0/0:99:27:27:964:0:0:0,-8.12781,-10 0/0:70.919:17:17:623:0:0:0,-5.11751,-10 0/0:34.7954:5:5:190:0:0:0,-1.50515,-10 0/0:64.8984:15:15:569:0:0:0,-4.51545,-10 0/0:82.9602:21:21:753:0:0:0,-6.32163,-10 0/0:46.8366:9:9:342:0:0:0,-2.70927,-10 0/0:99:37:37:1388:0:0:0,-10,-10 0/0:82.9602:21:21:767:0:0:0,-6.32163,-10 0/0:34.7954:5:5:186:0:0:0,-1.50515,-10 0/0:99:39:39:1436:0:0:0,-10,-10 0/0:43.8263:8:8:292:0:0:0,-2.40824,-10 0/0:88.9807:23:23:854:0:0:0,-6.92369,-10 0/0:40.816:7:7:259:0:0:0,-2.10721,-10 0/0:25.7645:2:2:74:0:0:0,-0.60206,-7.03 0/0:95.0011:25:25:899:0:0:0,-7.52575,-10 0/0:49.8469:10:10:334:0:0:0,-3.0103,-10 0/0:67.9087:16:16:603:0:0:0,-4.81648,-10 0/0:31.7851:4:4:152:0:0:0,-1.20412,-10 0/0:73.9293:18:18:636:0:0:0,-5.41854,-10 0/0:37.8057:6:6:205:0:0:0,-1.80618,-10 0/0:70.919:17:17:618:0:0:0,-5.11751,-10 0/0:70.919:17:17:622:0:0:0,-5.11751,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:55.8675:12:12:448:0:0:0,-3.61236,-10 0/0:49.8469:10:10:379:0:0:0,-3.0103,-10 0/0:67.9087:16:16:579:0:0:0,-4.81648,-10 0/0:55.8675:12:12:434:0:0:0,-3.61236,-10 0/0:55.8675:12:12:441:0:0:0,-3.61236,-10 0/0:99:28:28:1034:0:0:0,-8.42884,-10 0/0:37.8057:6:6:227:0:0:0,-1.80618,-10 0/0:64.8984:15:15:537:0:0:0,-4.51545,-10 0/1:99:19:8:303:11:394:-10,0,-10 0/1:99:17:9:338:8:303:-10,0,-10 0/0:49.8469:10:10:380:0:0:0,-3.0103,-10 0/0:76.9396:19:19:701:0:0:0,-5.71957,-10 0/0:0.41893:11:10:375:1:34:-1.13006,0,-10 0/0:52.8572:11:11:407:0:0:0,-3.31133,-10 0/0:49.8469:10:10:349:0:0:0,-3.0103,-10 0/0:37.8057:6:6:227:0:0:0,-1.80618,-10 0/0:43.8263:8:8:301:0:0:0,-2.40824,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:73.9293:18:18:660:0:0:0,-5.41854,-10 0/0:64.8984:15:15:534:0:0:0,-4.51545,-10 0/0:70.919:17:17:637:0:0:0,-5.11751,-10 0/0:58.8778:13:13:491:0:0:0,-3.91339,-10 0/0:34.7954:5:5:144:0:0:0,-1.50515,-10 0/0:52.8572:11:11:395:0:0:0,-3.31133,-10 0/0:61.8881:14:14:514:0:0:0,-4.21442,-10 0/0:49.8469:10:10:371:0:0:0,-3.0103,-10 0/0:46.8366:9:9:331:0:0:0,-2.70927,-10 0/0:40.816:7:7:265:0:0:0,-2.10721,-10 0/0:34.7954:5:5:182:0:0:0,-1.50515,-10 scaffold_222 434198 . C T 687.687 . AB=0.583333;ABP=5.9056;AC=2;AF=0.0108696;AN=184;AO=31;CIGAR=1X;DP=1306;DPB=1306;DPRA=1.45842;EPP=14.8483;EPPR=5.73742;GTI=2;LEN=1;MEANALT=1;MQM=59.9677;MQMR=59.9537;NS=92;NUMALT=1;ODDS=1.77547;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1102;QR=45920;RO=1274;RPP=70.3259;RPPR=2441.09;RUN=1;SAF=22;SAP=14.8483;SAR=9;SRF=656;SRP=5.47153;SRR=618;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:32.9915:9:9:335:0:0:0,-2.70927,-10 0/0:26.9709:7:7:263:0:0:0,-2.10721,-10 0/0:45.0327:13:13:452:0:0:0,-3.91339,-10 0/0:20.9503:5:5:190:0:0:0,-1.50515,-10 0/0:36.0018:10:10:353:0:0:0,-3.0103,-10 0/0:20.9503:5:5:185:0:0:0,-1.50515,-10 0/0:87.177:27:27:1020:0:0:0,-8.12781,-10 0/0:75.1357:23:23:817:0:0:0,-6.92369,-10 0/0:42.0224:12:12:437:0:0:0,-3.61236,-10 0/0:11.9194:2:2:76:0:0:0,-0.60206,-7.22 0/0:14.9297:3:3:113:0:0:0,-0.90309,-10 0/0:39.0121:11:11:411:0:0:0,-3.31133,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:58.0826:27:26:962:1:15:0,-5.19645,-10 0/0:48.043:14:14:517:0:0:0,-4.21442,-10 0/0:48.043:14:14:461:0:0:0,-4.21442,-10 0/0:26.9709:7:7:249:0:0:0,-2.10721,-10 0/0:29.9812:8:8:294:0:0:0,-2.40824,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:32.9915:9:9:313:0:0:0,-2.70927,-10 0/0:39.0121:11:11:413:0:0:0,-3.31133,-10 0/0:20.9503:5:5:190:0:0:0,-1.50515,-10 0/0:45.0327:13:13:487:0:0:0,-3.91339,-10 0/1:0.0841177:13:0:0:13:494:-10,-3.91339,0 0/0:66.1048:20:20:718:0:0:0,-6.0206,-10 0/0:54.0636:16:16:593:0:0:0,-4.81648,-10 0/0:23.9606:6:6:198:0:0:0,-1.80618,-10 0/0:60.0842:18:18:684:0:0:0,-5.41854,-10 0/0:46.6734:20:19:657:1:14:0,-3.31957,-10 0/0:20.9503:5:5:159:0:0:0,-1.50515,-10 0/0:36.0018:10:10:360:0:0:0,-3.0103,-10 0/0:45.0327:13:13:482:0:0:0,-3.91339,-10 0/0:32.9915:9:9:341:0:0:0,-2.70927,-10 0/0:51.0533:15:15:561:0:0:0,-4.51545,-10 0/0:17.94:4:4:140:0:0:0,-1.20412,-10 0/0:32.9915:9:9:336:0:0:0,-2.70927,-10 0/0:66.1048:20:20:712:0:0:0,-6.0206,-10 0/0:57.0739:17:17:598:0:0:0,-5.11751,-10 0/0:42.0224:12:12:450:0:0:0,-3.61236,-10 0/0:54.0636:16:16:600:0:0:0,-4.81648,-10 0/0:42.0224:13:12:455:0:0:0,-3.61236,-10 0/0:29.9812:8:8:295:0:0:0,-2.40824,-10 0/0:63.0945:19:19:691:0:0:0,-5.71957,-10 0/0:60.0842:18:18:639:0:0:0,-5.41854,-10 0/0:45.0327:13:13:451:0:0:0,-3.91339,-10 0/0:99:34:34:1192:0:0:0,-10,-10 0/0:39.0121:11:11:382:0:0:0,-3.31133,-10 0/0:48.043:14:14:526:0:0:0,-4.21442,-10 0/1:99:35:20:710:15:565:-10,0,-10 0/0:20.9503:5:5:184:0:0:0,-1.50515,-10 0/0:78.146:24:24:857:0:0:0,-7.22472,-10 0/0:39.0121:11:11:397:0:0:0,-3.31133,-10 0/0:14.9297:3:3:103:0:0:0,-0.90309,-9.61333 0/0:69.1151:21:21:702:0:0:0,-6.32163,-10 0/0:36.0018:10:10:366:0:0:0,-3.0103,-10 0/0:32.9915:9:9:296:0:0:0,-2.70927,-10 0/0:0.485321:6:5:176:1:14:-0.371971,0,-10 0/0:45.0327:13:13:467:0:0:0,-3.91339,-10 0/0:20.9503:5:5:166:0:0:0,-1.50515,-10 0/0:63.0945:19:19:664:0:0:0,-5.71957,-10 0/0:36.0018:10:10:375:0:0:0,-3.0103,-10 0/0:99:35:35:1269:0:0:0,-10,-10 0/0:54.0636:16:16:518:0:0:0,-4.81648,-10 0/0:42.0224:12:12:428:0:0:0,-3.61236,-10 0/0:78.146:24:24:896:0:0:0,-7.22472,-10 0/0:36.0018:10:10:380:0:0:0,-3.0103,-10 0/0:39.0121:11:11:347:0:0:0,-3.31133,-10 0/0:87.177:27:27:907:0:0:0,-8.12781,-10 0/0:36.0018:10:10:338:0:0:0,-3.0103,-10 0/0:51.0533:15:15:548:0:0:0,-4.51545,-10 0/0:63.0945:19:19:671:0:0:0,-5.71957,-10 0/0:69.1151:21:21:771:0:0:0,-6.32163,-10 0/0:36.0018:10:10:361:0:0:0,-3.0103,-10 0/0:75.1357:23:23:843:0:0:0,-6.92369,-10 0/0:29.9812:8:8:299:0:0:0,-2.40824,-10 0/0:26.9709:7:7:242:0:0:0,-2.10721,-10 0/0:39.0121:11:11:365:0:0:0,-3.31133,-10 0/0:23.9606:6:6:223:0:0:0,-1.80618,-10 0/0:51.0533:15:15:543:0:0:0,-4.51545,-10 0/0:72.1254:22:22:824:0:0:0,-6.62266,-10 0/0:78.146:24:24:875:0:0:0,-7.22472,-10 0/0:66.1048:20:20:722:0:0:0,-6.0206,-10 0/0:45.0327:13:13:458:0:0:0,-3.91339,-10 0/0:39.0121:11:11:418:0:0:0,-3.31133,-10 0/0:29.9812:8:8:286:0:0:0,-2.40824,-10 0/0:78.146:24:24:892:0:0:0,-7.22472,-10 0/0:39.0121:11:11:386:0:0:0,-3.31133,-10 0/0:14.9297:3:3:110:0:0:0,-0.90309,-10 0/0:54.0636:16:16:587:0:0:0,-4.81648,-10 0/0:26.9709:7:7:238:0:0:0,-2.10721,-10 0/0:42.0224:12:12:421:0:0:0,-3.61236,-10 scaffold_222 434307 . T TC 368.611 . AB=0.421053;ABP=5.06748;AC=2;AF=0.0108696;AN=184;AO=16;CIGAR=1M1I1M;DP=1549;DPB=1557;DPRA=1.1317;EPP=3.0103;EPPR=15.0387;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9856;NS=92;NUMALT=1;ODDS=8.5382;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=577;QR=56014;RO=1528;RPP=37.7539;RPPR=3149.58;RUN=1;SAF=8;SAP=3.0103;SAR=8;SRF=792;SRP=7.46693;SRR=736;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:67.1865:12:12:456:0:0:0,-3.61236,-10 0|0:70.1968:13:13:458:0:0:0,-3.91339,-10 0|0:91.2687:20:20:742:0:0:0,-6.0206,-10 0|0:67.1865:12:12:441:0:0:0,-3.61236,-10 0|0:55.1453:8:8:281:0:0:0,-2.40824,-10 0|0:46.1144:5:5:187:0:0:0,-1.50515,-10 0|0:99:39:38:1387:0:0:0,-10,-10 0|0:99:30:30:1117:0:0:0,-9.0309,-10 0|0:55.1453:8:8:286:0:0:0,-2.40824,-10 0|0:37.0835:2:2:75:0:0:0,-0.60206,-7.125 0|0:46.1144:5:5:189:0:0:0,-1.50515,-10 0|0:46.1144:5:5:189:0:0:0,-1.50515,-10 0|0:99:24:24:887:0:0:0,-7.22472,-10 0|0:99:31:31:1134:0:0:0,-9.33193,-10 0|0:97.2885:22:22:813:0:0:0,-6.62266,-10 0|0:85.2483:18:18:631:0:0:0,-5.41854,-10 0|0:99:24:24:871:0:0:0,-7.22472,-10 0|0:52.135:7:7:266:0:0:0,-2.10721,-10 0|0:97.2885:22:22:816:0:0:0,-6.62266,-10 0|0:94.2787:21:21:761:0:0:0,-6.32163,-10 0|0:70.1968:13:13:494:0:0:0,-3.91339,-10 0|0:99:23:23:861:0:0:0,-6.92369,-10 0|0:58.1556:9:9:342:0:0:0,-2.70927,-10 0|0:99:23:23:857:0:0:0,-6.92369,-10 0|0:73.2071:14:14:485:0:0:0,-4.21442,-10 0|0:91.2687:20:20:751:0:0:0,-6.0206,-10 0|0:85.2483:18:18:659:0:0:0,-5.41854,-10 0|0:49.1247:6:6:223:0:0:0,-1.80618,-10 0|0:70.1968:13:13:486:0:0:0,-3.91339,-10 0|0:99:32:32:1148:0:0:0,-9.63296,-10 0|0:46.1144:5:5:177:0:0:0,-1.50515,-10 0|0:55.1453:8:8:301:0:0:0,-2.40824,-10 0|0:82.238:17:17:615:0:0:0,-5.11751,-10 0|0:52.135:7:7:236:0:0:0,-2.10721,-10 0|0:99:23:23:852:0:0:0,-6.92369,-10 0|0:40.0938:3:3:114:0:0:0,-0.90309,-10 0|0:67.1865:12:12:429:0:0:0,-3.61236,-10 0|0:85.2483:18:18:642:0:0:0,-5.41854,-10 0|0:88.2585:19:19:696:0:0:0,-5.71957,-10 0|0:88.2585:19:19:683:0:0:0,-5.71957,-10 0|0:99:26:26:952:0:0:0,-7.82678,-10 0|0:76.2174:15:15:569:0:0:0,-4.51545,-10 0|0:76.2174:16:15:556:0:0:0,-4.51545,-10 0|0:99:29:29:1086:0:0:0,-8.72987,-10 0|0:99:24:24:881:0:0:0,-7.22472,-10 0|0:73.2071:14:14:503:0:0:0,-4.21442,-10 0|0:99:41:41:1509:0:0:0,-10,-10 0|0:70.1968:14:13:489:0:0:0,-3.91339,-10 0|0:58.1556:9:9:315:0:0:0,-2.70927,-10 0|0:99:28:28:1020:0:0:0,-8.42884,-10 0|0:55.1453:8:8:276:0:0:0,-2.40824,-10 0|0:99:34:34:1239:0:0:0,-10,-10 0|0:55.1453:8:8:300:0:0:0,-2.40824,-10 0|0:49.1247:6:6:228:0:0:0,-1.80618,-10 0|0:99:38:38:1421:0:0:0,-10,-10 0|0:52.135:7:7:259:0:0:0,-2.10721,-10 0|0:76.2174:15:15:535:0:0:0,-4.51545,-10 0|0:64.1762:11:11:413:0:0:0,-3.31133,-10 0|0:99:23:23:857:0:0:0,-6.92369,-10 0|0:85.2483:18:18:657:0:0:0,-5.41854,-10 0|0:99:32:32:1188:0:0:0,-9.63296,-10 0|0:70.1968:13:13:493:0:0:0,-3.91339,-10 0|0:99:34:34:1213:0:0:0,-10,-10 0|0:85.2483:18:18:670:0:0:0,-5.41854,-10 0|0:76.2174:15:15:563:0:0:0,-4.51545,-10 0|0:99:34:34:1275:0:0:0,-10,-10 0|0:94.2787:21:21:745:0:0:0,-6.32163,-10 0|0:61.1659:10:10:377:0:0:0,-3.0103,-10 0|0:99:26:26:952:0:0:0,-7.82678,-10 0|0:58.1556:9:9:325:0:0:0,-2.70927,-10 0|0:55.1453:8:8:282:0:0:0,-2.40824,-10 0|1:99:23:14:517:9:338:-10,0,-10 0|1:99:15:8:298:7:239:-10,0,-10 0|0:79.2277:16:16:591:0:0:0,-4.81648,-10 0|0:99:30:30:1074:0:0:0,-9.0309,-10 0|0:55.1453:8:8:286:0:0:0,-2.40824,-10 0|0:73.2071:14:14:526:0:0:0,-4.21442,-10 0|0:73.2071:14:14:497:0:0:0,-4.21442,-10 0|0:43.1041:5:4:152:0:0:0,-1.20412,-10 0|0:55.1453:8:8:300:0:0:0,-2.40824,-10 0|0:99:29:29:1037:0:0:0,-8.72987,-10 0|0:99:25:25:893:0:0:0,-7.52575,-10 0|0:94.2787:21:21:752:0:0:0,-6.32163,-10 0|0:55.1453:8:8:301:0:0:0,-2.40824,-10 0|0:79.2277:17:16:587:0:0:0,-4.81648,-10 0|0:43.1041:4:4:152:0:0:0,-1.20412,-10 0|0:64.1762:11:11:411:0:0:0,-3.31133,-10 0|0:76.2174:15:15:557:0:0:0,-4.51545,-10 0|0:46.1144:5:5:188:0:0:0,-1.50515,-10 0|0:82.238:17:17:623:0:0:0,-5.11751,-10 0|0:85.2483:18:18:678:0:0:0,-5.41854,-10 0|0:67.1865:12:12:408:0:0:0,-3.61236,-10 scaffold_222 447360 . CA C 1552.51 . AB=0.5625;ABP=4.09604;AC=6;AF=0.0326087;AN=184;AO=63;CIGAR=1M1D1X;DP=2320;DPB=2897.33;DPRA=0.755239;EPP=3.32051;EPPR=3.19896;GTI=1;LEN=1;MEANALT=1;MQM=59.8413;MQMR=59.9721;NS=92;NUMALT=1;ODDS=0.860831;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=19;PQR=32854;PRO=897.5;QA=2257;QR=81509;RO=2256;RPP=139.813;RPPR=4468.89;RUN=1;SAF=30;SAP=3.32051;SAR=33;SRF=1136;SRP=3.25671;SRR=1120;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:91.2076:22:22:772:0:0:0,-6.62266,-10 0|0:64.1164:13:13:477:0:0:0,-3.91339,-10 0|0:99:34:34:1243:0:0:0,-10,-10 0|0:85.1881:20:20:739:0:0:0,-6.0206,-10 0|0:99:26:26:924:0:0:0,-7.82678,-10 0|0:91.2076:22:22:810:0:0:0,-6.62266,-10 0|0:99:62:62:2236:0:0:0,-10,-10 0|0:99:34:34:1229:0:0:0,-10,-10 0|0:85.1881:20:20:732:0:0:0,-6.0206,-10 0|0:58.0958:11:11:396:0:0:0,-3.31133,-10 0|0:61.1061:12:12:441:0:0:0,-3.61236,-10 0|0:46.0546:7:7:257:0:0:0,-2.10721,-10 0|0:99:35:35:1262:0:0:0,-10,-10 0|0:99:31:31:1140:0:0:0,-9.33193,-10 0|0:99:42:42:1530:0:0:0,-10,-10 0|0:99:38:38:1370:0:0:0,-10,-10 0|0:99:39:39:1437:0:0:0,-10,-10 0|0:61.1061:12:12:443:0:0:0,-3.61236,-10 0|0:99:28:28:1016:0:0:0,-8.42884,-10 0|0:99:54:54:1969:0:0:0,-10,-10 0|0:91.2076:22:22:804:0:0:0,-6.62266,-10 0|0:99:37:37:1370:0:0:0,-10,-10 0|0:46.0546:7:7:263:0:0:0,-2.10721,-10 0|0:85.1881:20:20:729:0:0:0,-6.0206,-10 0|0:61.1061:12:12:453:0:0:0,-3.61236,-10 0|0:99:35:35:1287:0:0:0,-10,-10 0|0:91.2076:22:22:773:0:0:0,-6.62266,-10 0|0:85.1881:20:20:711:0:0:0,-6.0206,-10 0|0:99:26:26:971:0:0:0,-7.82678,-10 0|0:99:31:31:1139:0:0:0,-9.33193,-10 0|0:52.0752:9:9:307:0:0:0,-2.70927,-10 0|0:43.0443:6:6:211:0:0:0,-1.80618,-10 0|0:94.2189:23:23:808:0:0:0,-6.92369,-10 0|0:67.1267:14:14:528:0:0:0,-4.21442,-10 0|0:99:31:31:1122:0:0:0,-9.33193,-10 0|0:58.0958:11:11:399:0:0:0,-3.31133,-10 0|0:58.0958:11:11:388:0:0:0,-3.31133,-10 0|0:99:33:33:1204:0:0:0,-9.93399,-10 0|0:91.2076:22:22:778:0:0:0,-6.62266,-10 0|0:97.2287:24:24:820:0:0:0,-7.22472,-10 0|0:99:35:35:1268:0:0:0,-10,-10 0|0:99:27:27:982:0:0:0,-8.12781,-10 0|0:91.2076:22:22:778:0:0:0,-6.62266,-10 0|0:99:41:41:1479:0:0:0,-10,-10 0|0:99:26:26:926:0:0:0,-7.82678,-10 0|0:99:31:31:1121:0:0:0,-9.33193,-10 0|0:99:58:58:2042:0:0:0,-10,-10 0|0:99:39:39:1389:0:0:0,-10,-10 0|0:64.1164:13:13:459:0:0:0,-3.91339,-10 0|0:99:49:49:1769:0:0:0,-10,-10 0|0:82.178:19:19:629:0:0:0,-5.71957,-10 0|0:99:44:44:1544:0:0:0,-10,-10 0|0:61.1061:12:12:452:0:0:0,-3.61236,-10 0|0:67.1267:14:14:505:0:0:0,-4.21442,-10 0|0:99:43:43:1557:0:0:0,-10,-10 0|0:70.137:15:15:565:0:0:0,-4.51545,-10 0|0:99:29:29:1062:0:0:0,-8.72987,-10 0|0:64.1164:13:13:476:0:0:0,-3.91339,-10 0|0:99:31:31:1105:0:0:0,-9.33193,-10 0|0:67.1267:14:14:505:0:0:0,-4.21442,-10 0|0:99:48:48:1698:0:0:0,-10,-10 0|0:82.178:19:19:705:0:0:0,-5.71957,-10 0|0:99:52:52:1865:0:0:0,-10,-10 0|0:94.2189:23:23:852:0:0:0,-6.92369,-10 0|0:58.0958:11:11:399:0:0:0,-3.31133,-10 0|0:99:43:43:1537:0:0:0,-10,-10 0|0:99:27:27:996:0:0:0,-8.12781,-10 0|0:58.0958:11:11:417:0:0:0,-3.31133,-10 0|0:99:43:43:1533:0:0:0,-10,-10 0|0:58.0958:11:11:413:0:0:0,-3.31133,-10 0|1:2.07198e-05:9:0:0:9:320:-10,-2.70927,0 1|1:8.88275:23:0:0:23:820:-10,-6.92369,0 1|1:5.87245:22:0:0:22:815:-10,-6.62266,0 0|0:99:26:26:955:0:0:0,-7.82678,-10 0|1:99:23:14:507:9:302:-10,0,-10 0|0:67.1267:14:14:487:0:0:0,-4.21442,-10 0|0:73.1473:16:16:568:0:0:0,-4.81648,-10 0|0:73.1473:16:16:564:0:0:0,-4.81648,-10 0|0:46.0546:7:7:245:0:0:0,-2.10721,-10 0|0:73.1473:16:16:547:0:0:0,-4.81648,-10 0|0:99:50:50:1824:0:0:0,-10,-10 0|0:99:32:32:1170:0:0:0,-9.63296,-10 0|0:99:30:30:1075:0:0:0,-9.0309,-10 0|0:99:26:26:940:0:0:0,-7.82678,-10 0|0:99:26:26:950:0:0:0,-7.82678,-10 0|0:46.0546:8:7:263:0:0:0,-2.10721,-10 0|0:99:29:29:1042:0:0:0,-8.72987,-10 0|0:88.1987:21:21:783:0:0:0,-6.32163,-10 0|0:49.0649:8:8:287:0:0:0,-2.40824,-10 0|0:99:25:25:933:0:0:0,-7.52575,-10 0|0:99:27:27:973:0:0:0,-8.12781,-10 0|0:99:25:25:880:0:0:0,-7.52575,-10 scaffold_222 447362 . G C 1552.51 . AB=0.5625;ABP=4.09604;AC=6;AF=0.0326087;AN=184;AO=63;CIGAR=1M1D1X;DP=2320;DPB=2897.33;DPRA=0.755239;EPP=3.32051;EPPR=3.19896;GTI=1;LEN=1;MEANALT=1;MQM=59.8413;MQMR=59.9721;NS=92;NUMALT=1;ODDS=0.860831;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=19;PQR=32854;PRO=897.5;QA=2257;QR=81509;RO=2256;RPP=139.813;RPPR=4468.89;RUN=1;SAF=30;SAP=3.32051;SAR=33;SRF=1136;SRP=3.25671;SRR=1120;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:91.2076:22:22:772:0:0:0,-6.62266,-10 0|0:64.1164:13:13:477:0:0:0,-3.91339,-10 0|0:99:34:34:1243:0:0:0,-10,-10 0|0:85.1881:20:20:739:0:0:0,-6.0206,-10 0|0:99:26:26:924:0:0:0,-7.82678,-10 0|0:91.2076:22:22:810:0:0:0,-6.62266,-10 0|0:99:62:62:2236:0:0:0,-10,-10 0|0:99:34:34:1229:0:0:0,-10,-10 0|0:85.1881:20:20:732:0:0:0,-6.0206,-10 0|0:58.0958:11:11:396:0:0:0,-3.31133,-10 0|0:61.1061:12:12:441:0:0:0,-3.61236,-10 0|0:46.0546:7:7:257:0:0:0,-2.10721,-10 0|0:99:35:35:1262:0:0:0,-10,-10 0|0:99:31:31:1140:0:0:0,-9.33193,-10 0|0:99:42:42:1530:0:0:0,-10,-10 0|0:99:38:38:1370:0:0:0,-10,-10 0|0:99:39:39:1437:0:0:0,-10,-10 0|0:61.1061:12:12:443:0:0:0,-3.61236,-10 0|0:99:28:28:1016:0:0:0,-8.42884,-10 0|0:99:54:54:1969:0:0:0,-10,-10 0|0:91.2076:22:22:804:0:0:0,-6.62266,-10 0|0:99:37:37:1370:0:0:0,-10,-10 0|0:46.0546:7:7:263:0:0:0,-2.10721,-10 0|0:85.1881:20:20:729:0:0:0,-6.0206,-10 0|0:61.1061:12:12:453:0:0:0,-3.61236,-10 0|0:99:35:35:1287:0:0:0,-10,-10 0|0:91.2076:22:22:773:0:0:0,-6.62266,-10 0|0:85.1881:20:20:711:0:0:0,-6.0206,-10 0|0:99:26:26:971:0:0:0,-7.82678,-10 0|0:99:31:31:1139:0:0:0,-9.33193,-10 0|0:52.0752:9:9:307:0:0:0,-2.70927,-10 0|0:43.0443:6:6:211:0:0:0,-1.80618,-10 0|0:94.2189:23:23:808:0:0:0,-6.92369,-10 0|0:67.1267:14:14:528:0:0:0,-4.21442,-10 0|0:99:31:31:1122:0:0:0,-9.33193,-10 0|0:58.0958:11:11:399:0:0:0,-3.31133,-10 0|0:58.0958:11:11:388:0:0:0,-3.31133,-10 0|0:99:33:33:1204:0:0:0,-9.93399,-10 0|0:91.2076:22:22:778:0:0:0,-6.62266,-10 0|0:97.2287:24:24:820:0:0:0,-7.22472,-10 0|0:99:35:35:1268:0:0:0,-10,-10 0|0:99:27:27:982:0:0:0,-8.12781,-10 0|0:91.2076:22:22:778:0:0:0,-6.62266,-10 0|0:99:41:41:1479:0:0:0,-10,-10 0|0:99:26:26:926:0:0:0,-7.82678,-10 0|0:99:31:31:1121:0:0:0,-9.33193,-10 0|0:99:58:58:2042:0:0:0,-10,-10 0|0:99:39:39:1389:0:0:0,-10,-10 0|0:64.1164:13:13:459:0:0:0,-3.91339,-10 0|0:99:49:49:1769:0:0:0,-10,-10 0|0:82.178:19:19:629:0:0:0,-5.71957,-10 0|0:99:44:44:1544:0:0:0,-10,-10 0|0:61.1061:12:12:452:0:0:0,-3.61236,-10 0|0:67.1267:14:14:505:0:0:0,-4.21442,-10 0|0:99:43:43:1557:0:0:0,-10,-10 0|0:70.137:15:15:565:0:0:0,-4.51545,-10 0|0:99:29:29:1062:0:0:0,-8.72987,-10 0|0:64.1164:13:13:476:0:0:0,-3.91339,-10 0|0:99:31:31:1105:0:0:0,-9.33193,-10 0|0:67.1267:14:14:505:0:0:0,-4.21442,-10 0|0:99:48:48:1698:0:0:0,-10,-10 0|0:82.178:19:19:705:0:0:0,-5.71957,-10 0|0:99:52:52:1865:0:0:0,-10,-10 0|0:94.2189:23:23:852:0:0:0,-6.92369,-10 0|0:58.0958:11:11:399:0:0:0,-3.31133,-10 0|0:99:43:43:1537:0:0:0,-10,-10 0|0:99:27:27:996:0:0:0,-8.12781,-10 0|0:58.0958:11:11:417:0:0:0,-3.31133,-10 0|0:99:43:43:1533:0:0:0,-10,-10 0|0:58.0958:11:11:413:0:0:0,-3.31133,-10 0|1:2.07198e-05:9:0:0:9:320:-10,-2.70927,0 1|1:8.88275:23:0:0:23:820:-10,-6.92369,0 1|1:5.87245:22:0:0:22:815:-10,-6.62266,0 0|0:99:26:26:955:0:0:0,-7.82678,-10 0|1:99:23:14:507:9:302:-10,0,-10 0|0:67.1267:14:14:487:0:0:0,-4.21442,-10 0|0:73.1473:16:16:568:0:0:0,-4.81648,-10 0|0:73.1473:16:16:564:0:0:0,-4.81648,-10 0|0:46.0546:7:7:245:0:0:0,-2.10721,-10 0|0:73.1473:16:16:547:0:0:0,-4.81648,-10 0|0:99:50:50:1824:0:0:0,-10,-10 0|0:99:32:32:1170:0:0:0,-9.63296,-10 0|0:99:30:30:1075:0:0:0,-9.0309,-10 0|0:99:26:26:940:0:0:0,-7.82678,-10 0|0:99:26:26:950:0:0:0,-7.82678,-10 0|0:46.0546:8:7:263:0:0:0,-2.10721,-10 0|0:99:29:29:1042:0:0:0,-8.72987,-10 0|0:88.1987:21:21:783:0:0:0,-6.32163,-10 0|0:49.0649:8:8:287:0:0:0,-2.40824,-10 0|0:99:25:25:933:0:0:0,-7.52575,-10 0|0:99:27:27:973:0:0:0,-8.12781,-10 0|0:99:25:25:880:0:0:0,-7.52575,-10 scaffold_222 459845 . C T 928.938 . AB=0.569231;ABP=5.71629;AC=2;AF=0.0108696;AN=184;AO=37;CIGAR=1X;DP=2068;DPB=2068;DPRA=1.46031;EPP=5.88603;EPPR=9.02435;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9133;NS=92;NUMALT=1;ODDS=4.87423;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1305;QR=72807;RO=2031;RPP=83.3548;RPPR=4413.27;RUN=1;SAF=22;SAP=5.88603;SAR=15;SRF=978;SRP=9.02435;SRR=1053;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:31:31:1113:0:0:0,-9.33193,-10 0/0:33.3076:9:9:257:0:0:0,-2.70927,-10 0/0:72.4415:22:22:822:0:0:0,-6.62266,-10 0/0:51.3694:15:15:536:0:0:0,-4.51545,-10 0/0:72.4415:22:22:797:0:0:0,-6.62266,-10 0/0:33.3076:9:9:330:0:0:0,-2.70927,-10 0/1:99:41:19:603:22:802:-10,0,-10 0/0:99:32:32:1137:0:0:0,-9.63296,-10 0/0:48.3591:14:14:497:0:0:0,-4.21442,-10 0/0:21.2664:5:5:182:0:0:0,-1.50515,-10 0/0:33.3076:9:9:310:0:0:0,-2.70927,-10 0/0:45.3488:13:13:480:0:0:0,-3.91339,-10 0/0:99:37:37:1364:0:0:0,-10,-10 0/0:99:31:31:1120:0:0:0,-9.33193,-10 0/0:66.4209:20:20:717:0:0:0,-6.0206,-10 0/0:99:35:35:1213:0:0:0,-10,-10 0/1:99:24:9:308:15:503:-10,0,-10 0/0:30.2973:8:8:304:0:0:0,-2.40824,-10 0/0:99:35:35:1261:0:0:0,-10,-10 0/0:99:37:37:1382:0:0:0,-10,-10 0/0:57.39:17:17:607:0:0:0,-5.11751,-10 0/0:99:43:43:1601:0:0:0,-10,-10 0/0:42.3385:12:12:449:0:0:0,-3.61236,-10 0/0:78.4621:24:24:903:0:0:0,-7.22472,-10 0/0:57.39:17:17:617:0:0:0,-5.11751,-10 0/0:81.4723:25:25:886:0:0:0,-7.52575,-10 0/0:54.3797:16:16:589:0:0:0,-4.81648,-10 0/0:69.4312:21:21:764:0:0:0,-6.32163,-10 0/0:75.4518:23:23:821:0:0:0,-6.92369,-10 0/0:99:36:36:1272:0:0:0,-10,-10 0/0:30.2973:8:8:302:0:0:0,-2.40824,-10 0/0:42.3385:12:12:456:0:0:0,-3.61236,-10 0/0:66.4209:20:20:756:0:0:0,-6.0206,-10 0/0:54.3797:16:16:590:0:0:0,-4.81648,-10 0/0:81.4723:25:25:910:0:0:0,-7.52575,-10 0/0:36.3179:10:10:349:0:0:0,-3.0103,-10 0/0:60.4003:18:18:596:0:0:0,-5.41854,-10 0/0:93.5123:29:29:993:0:0:0,-8.72987,-10 0/0:66.4209:20:20:716:0:0:0,-6.0206,-10 0/0:51.3694:15:15:567:0:0:0,-4.51545,-10 0/0:99:39:39:1450:0:0:0,-10,-10 0/0:63.4106:19:19:699:0:0:0,-5.71957,-10 0/0:87.4927:27:27:999:0:0:0,-8.12781,-10 0/0:99:41:41:1523:0:0:0,-10,-10 0/0:81.4723:25:25:905:0:0:0,-7.52575,-10 0/0:54.3797:16:16:534:0:0:0,-4.81648,-10 0/0:99:51:51:1811:0:0:0,-10,-10 0/0:84.4826:26:26:904:0:0:0,-7.82678,-10 0/0:45.3488:13:13:462:0:0:0,-3.91339,-10 0/0:99:35:35:1195:0:0:0,-10,-10 0/0:54.3797:16:16:553:0:0:0,-4.81648,-10 0/0:99:40:40:1453:0:0:0,-10,-10 0/0:60.4003:18:18:663:0:0:0,-5.41854,-10 0/0:27.287:7:7:259:0:0:0,-2.10721,-10 0/0:99:43:43:1591:0:0:0,-10,-10 0/0:81.4723:25:25:878:0:0:0,-7.52575,-10 0/0:69.4312:21:21:757:0:0:0,-6.32163,-10 0/0:36.3179:10:10:351:0:0:0,-3.0103,-10 0/0:84.4826:26:26:961:0:0:0,-7.82678,-10 0/0:42.3385:12:12:415:0:0:0,-3.61236,-10 0/0:99:37:37:1320:0:0:0,-10,-10 0/0:66.4209:20:20:698:0:0:0,-6.0206,-10 0/0:99:47:47:1693:0:0:0,-10,-10 0/0:90.5027:28:28:962:0:0:0,-8.42884,-10 0/0:51.3694:15:15:539:0:0:0,-4.51545,-10 0/0:87.4927:27:27:972:0:0:0,-8.12781,-10 0/0:66.4209:20:20:733:0:0:0,-6.0206,-10 0/0:39.3282:11:11:414:0:0:0,-3.31133,-10 0/0:99:51:51:1836:0:0:0,-10,-10 0/0:36.3179:10:10:370:0:0:0,-3.0103,-10 0/0:87.4927:27:27:941:0:0:0,-8.12781,-10 0/0:84.4826:26:26:922:0:0:0,-7.82678,-10 0/0:72.4415:22:22:767:0:0:0,-6.62266,-10 0/0:57.39:17:17:642:0:0:0,-5.11751,-10 0/0:69.4312:21:21:734:0:0:0,-6.32163,-10 0/0:75.4518:23:23:815:0:0:0,-6.92369,-10 0/0:51.3694:15:15:519:0:0:0,-4.51545,-10 0/0:48.3591:14:14:526:0:0:0,-4.21442,-10 0/0:33.3076:9:9:321:0:0:0,-2.70927,-10 0/0:33.3076:9:9:316:0:0:0,-2.70927,-10 0/0:99:34:34:1260:0:0:0,-10,-10 0/0:66.4209:20:20:673:0:0:0,-6.0206,-10 0/0:78.4621:24:24:810:0:0:0,-7.22472,-10 0/0:81.4723:25:25:884:0:0:0,-7.52575,-10 0/0:99:36:36:1258:0:0:0,-10,-10 0/0:21.2664:5:5:187:0:0:0,-1.50515,-10 0/0:42.3385:12:12:404:0:0:0,-3.61236,-10 0/0:45.3488:13:13:461:0:0:0,-3.91339,-10 0/0:42.3385:12:12:447:0:0:0,-3.61236,-10 0/0:81.4723:25:25:876:0:0:0,-7.52575,-10 0/0:75.4518:23:23:829:0:0:0,-6.92369,-10 0/0:78.4621:24:24:838:0:0:0,-7.22472,-10 scaffold_222 747558 . T C,G 22412.9 . AB=0.526185,0.55814;ABP=5.39838,4.27278;AC=93,2;AF=0.510989,0.010989;AN=182,182;AO=777,25;CIGAR=1X,1X;DP=1455,1455;DPB=1455,1455;DPRA=1.33043,1.39676;EPP=3.34846,3.09716;EPPR=8.08374,8.08374;GTI=2,2;LEN=1,1;MEANALT=1.01818,1.33333;MQM=59.9485,58.92;MQMR=60,60;NS=91,91;NUMALT=2,2;ODDS=0.972278,0.972278;PAIRED=0,0;PAIREDR=0,0;PAO=0,0;PQA=0,0;PQR=0,0;PRO=0,0;QA=28100,817;QR=23454,23454;RO=651,651;RPP=1672.92,57.2971;RPPR=1399.32,1399.32;RUN=1,1;SAF=396,13;SAP=3.6391,3.09716;SAR=381,12;SRF=347,347;SRP=9.17782,9.17782;SRR=304,304;TYPE=snp,snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:22.3641:11:11:415:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 0|0:13.3332:8:8:275:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 1|1:47.7706:15:0:0:15,0:567,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:23.6882:7:0:0:7,0:253,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:22.3641:11:11:413:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 .:.:.:.:.:.:.:. 0|1:99:25:12:440:13,0:491,0:-10,0,-10,-10,-10,-10 0|1:99:28:7:220:21,0:766,0:-10,0,-10,-10,-10,-10 0|0:28.3847:13:13:470:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 1|1:17.6676:5:0:0:5,0:181,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:23.6882:7:0:0:7,0:202,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:16.3435:9:9:298:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 1|1:99:35:0:0:35,0:1301,0:-10,-10,0,-10,-10,-10 0|1:99:26:15:539:11,0:403,0:-10,0,-10,-10,-10,-10 0|1:99:28:10:324:18,0:640,0:-10,0,-10,-10,-10,-10 0|1:99:20:14:489:6,0:223,0:-10,0,-10,-10,-10,-10 1|1:50.7809:16:0:0:16,0:589,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:14.6573:4:0:0:4,0:138,0:-10,-1.20412,0,-10,-1.20412,-10 0|1:99:11:5:190:6,0:181,0:-10,0,-10,-10,-10,-10 0|1:99:34:18:633:16,0:575,0:-10,0,-10,-10,-10,-10 1|1:38.7397:12:0:0:12,0:382,0:-10,-3.61236,0,-10,-3.61236,-10 0|1:99:27:13:452:14,0:518,0:-10,0,-10,-10,-10,-10 1|1:29.7088:9:0:0:9,0:340,0:-10,-2.70927,0,-10,-2.70927,-10 0|1:99:12:5:189:7,0:260,0:-10,0,-10,-10,-10,-10 1|1:32.7191:10:0:0:10,0:357,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:34.2237:19:1:16:18,0:664,0:-10,-2.84082,0,-10,-5.41854,-10 1|1:62.8221:20:0:0:20,0:718,0:-10,-6.0206,0,-10,-6.0206,-10 1|1:32.7191:10:0:0:10,0:377,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:59.8118:19:0:0:19,0:685,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:98.9402:32:0:0:32,0:1173,0:-10,-9.63296,0,-10,-9.63296,-10 1|1:20.6779:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:20.6779:6:0:0:6,0:224,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:34.4053:15:15:533:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:25.3744:12:12:417:0,0:0,0:0,-3.61236,-10,-3.61236,-10,-10 1|1:62.8221:20:0:0:20,0:726,0:-10,-6.0206,0,-10,-6.0206,-10 0|1:0.223208:1:0:0:1,0:37,0:-3.7,-0.30103,0,-3.7,-0.30103,-3.7 1|1:35.7294:11:0:0:11,0:360,0:-10,-3.31133,0,-10,-3.31133,-10 0|1:99:27:14:497:13,0:487,0:-10,0,-10,-10,-10,-10 1|1:35.7294:11:0:0:11,0:408,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:50.7809:17:0:0:16,1:556,16:-10,-4.81648,0,-10,-2.28706,-10 1|1:92.9237:30:0:0:30,0:1034,0:-10,-9.0309,0,-10,-9.0309,-10 1|1:50.7809:16:0:0:16,0:592,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:37.4156:17:16:532:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 1|1:77.8735:25:0:0:25,0:855,0:-10,-7.52575,0,-10,-7.52575,-10 1|1:29.7088:9:0:0:9,0:335,0:-10,-2.70927,0,-10,-2.70927,-10 0|1:99:18:10:377:8,0:294,0:-10,0,-10,-10,-10,-10 0|1:99:39:12:426:27,0:996,0:-10,0,-10,-10,-10,-10 1|1:47.7706:15:0:0:15,0:528,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:47.7706:15:0:0:15,0:550,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:99:41:0:0:41,0:1527,0:-10,-10,0,-10,-10,-10 0|0:22.3641:11:11:401:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 1|1:86.9041:28:0:0:28,0:1043,0:-10,-8.42884,0,-10,-8.42884,-10 1|1:35.7294:11:0:0:11,0:394,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:13.3332:8:8:293:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 0|1:99:29:17:623:12,0:454,0:-10,0,-10,-10,-10,-10 1|1:29.7088:9:0:0:9,0:317,0:-10,-2.70927,0,-10,-2.70927,-10 0|1:99:15:9:324:6,0:203,0:-10,0,-10,-10,-10,-10 1|1:41.75:13:0:0:13,0:437,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:16.3435:9:9:337:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 1|1:38.7397:12:0:0:12,0:417,0:-10,-3.61236,0,-10,-3.61236,-10 0|2:99:24:11:401:0,13:0,418:-10,-10,-10,0,-10,-10 0|0:16.3435:9:9:342:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:67.5186:26:26:973:0,0:0,0:0,-7.82678,-10,-7.82678,-10,-10 0|0:37.4156:16:16:547:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:10.3229:7:7:261:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|1:99:25:13:458:12,0:445,0:-10,0,-10,-10,-10,-10 0|0:34.4053:15:15:522:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:10.3229:7:7:243:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|0:28.3847:13:13:450:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:16.3435:9:9:329:0,0:0,0:0,-2.70927,-10,-2.70927,-10,-10 0|0:34.4053:15:15:545:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:37.4156:17:16:593:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|0:46.4465:19:19:716:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:61.498:24:24:891:0,0:0,0:0,-7.22472,-10,-7.22472,-10,-10 0|0:37.4156:16:16:596:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|1:0.32889:6:6:228:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|0:25.3744:12:12:453:0,0:0,0:0,-3.61236,-10,-3.61236,-10,-10 0|0:28.3847:13:13:464:0,0:0,0:0,-3.91339,-10,-3.91339,-10,-10 0|0:13.3332:8:8:297:0,0:0,0:0,-2.40824,-10,-2.40824,-10,-10 1|1:26.6985:8:0:0:8,0:296,0:-10,-2.40824,0,-10,-2.40824,-10 0|1:99:21:12:412:9,0:331,0:-10,0,-10,-10,-10,-10 0|0:46.4465:19:19:705:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 0|0:37.4156:16:16:580:0,0:0,0:0,-4.81648,-10,-4.81648,-10,-10 0|2:99:19:8:293:0,11:0,383:-10,-10,-10,0,-10,-10 0|0:34.4053:15:15:536:0,0:0,0:0,-4.51545,-10,-4.51545,-10,-10 0|0:22.3641:11:11:414:0,0:0,0:0,-3.31133,-10,-3.31133,-10,-10 1|1:50.7809:16:0:0:16,0:604,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:38.7397:12:0:0:12,0:430,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:10.3229:7:7:242:0,0:0,0:0,-2.10721,-10,-2.10721,-10,-10 0|1:99:15:4:149:11,0:417,0:-10,0,-10,-10,-10,-10 0|0:46.4465:19:19:691:0,0:0,0:0,-5.71957,-10,-5.71957,-10,-10 1|1:53.7912:17:0:0:17,0:591,0:-10,-5.11751,0,-10,-5.11751,-10 scaffold_222 747573 . G A 318.616 . AB=0.541667;ABP=3.37221;AC=1;AF=0.00549451;AN=182;AO=13;CIGAR=1X;DP=1459;DPB=1459;DPRA=1.50523;EPP=4.51363;EPPR=5.91761;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9502;NS=91;NUMALT=1;ODDS=5.59052;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=52906;RO=1446;RPP=23.2217;RPPR=2846.31;RUN=1;SAF=6;SAP=3.17734;SAR=7;SRF=750;SRP=7.38929;SRR=696;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:54.4055:11:11:409:0:0:0,-3.31133,-10 0/0:45.3746:8:8:280:0:0:0,-2.40824,-10 0/0:66.4467:15:15:568:0:0:0,-4.51545,-10 0/0:42.3643:7:7:242:0:0:0,-2.10721,-10 0/0:54.4055:11:11:403:0:0:0,-3.31133,-10 .:.:.:.:.:.:.:. 0/0:96.5502:25:25:922:0:0:0,-7.52575,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 0/0:60.4261:13:13:478:0:0:0,-3.91339,-10 0/0:36.3437:5:5:166:0:0:0,-1.50515,-10 0/0:42.3643:7:7:222:0:0:0,-2.10721,-10 0/0:48.3849:9:9:320:0:0:0,-2.70927,-10 0/0:99:35:35:1315:0:0:0,-10,-10 0/0:99:26:26:944:0:0:0,-7.82678,-10 0/0:99:28:28:1022:0:0:0,-8.42884,-10 0/0:81.4981:20:20:752:0:0:0,-6.0206,-10 0/0:69.457:16:16:594:0:0:0,-4.81648,-10 0/0:33.3334:4:4:152:0:0:0,-1.20412,-10 0/0:54.4055:11:11:402:0:0:0,-3.31133,-10 0/0:99:34:34:1205:0:0:0,-10,-10 0/0:57.4158:12:12:436:0:0:0,-3.61236,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:48.3849:9:9:322:0:0:0,-2.70927,-10 0/0:57.4158:12:12:423:0:0:0,-3.61236,-10 0/0:51.3952:10:10:362:0:0:0,-3.0103,-10 0/0:78.4879:19:19:712:0:0:0,-5.71957,-10 0/0:81.4981:20:20:745:0:0:0,-6.0206,-10 0/0:51.3952:10:10:372:0:0:0,-3.0103,-10 0/0:78.4879:19:19:678:0:0:0,-5.71957,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:39.354:6:6:228:0:0:0,-1.80618,-10 0/0:39.354:6:6:228:0:0:0,-1.80618,-10 0/0:66.4467:15:15:562:0:0:0,-4.51545,-10 0/0:57.4158:12:12:403:0:0:0,-3.61236,-10 0/0:81.4981:20:20:744:0:0:0,-6.0206,-10 0/0:24.3025:1:1:38:0:0:0,-0.30103,-3.8 0/0:54.4055:11:11:351:0:0:0,-3.31133,-10 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:54.4055:11:11:416:0:0:0,-3.31133,-10 0/0:72.4673:17:17:589:0:0:0,-5.11751,-10 0/0:99:31:31:1153:0:0:0,-9.33193,-10 0/0:69.457:16:16:605:0:0:0,-4.81648,-10 0/0:72.4673:17:17:614:0:0:0,-5.11751,-10 0/0:96.5502:25:25:881:0:0:0,-7.52575,-10 0/0:48.3849:9:9:313:0:0:0,-2.70927,-10 0/0:75.4776:18:18:670:0:0:0,-5.41854,-10 0/0:99:40:40:1484:0:0:0,-10,-10 0/0:66.4467:15:15:569:0:0:0,-4.51545,-10 0/0:66.4467:15:15:564:0:0:0,-4.51545,-10 0/0:99:41:41:1508:0:0:0,-10,-10 0/0:54.4055:11:11:417:0:0:0,-3.31133,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:54.4055:11:11:415:0:0:0,-3.31133,-10 0/0:45.3746:8:8:265:0:0:0,-2.40824,-10 0/0:99:29:29:1091:0:0:0,-8.72987,-10 0/0:48.3849:9:9:338:0:0:0,-2.70927,-10 0/0:66.4467:15:15:544:0:0:0,-4.51545,-10 0/0:60.4261:13:13:414:0:0:0,-3.91339,-10 0/0:51.3952:10:10:376:0:0:0,-3.0103,-10 0/0:57.4158:12:12:448:0:0:0,-3.61236,-10 0/1:99:24:11:408:13:471:-10,0,-10 0/0:48.3849:9:9:320:0:0:0,-2.70927,-10 0/0:99:26:26:960:0:0:0,-7.82678,-10 0/0:69.457:16:16:593:0:0:0,-4.81648,-10 0/0:42.3643:7:7:262:0:0:0,-2.10721,-10 0/0:96.5502:25:25:929:0:0:0,-7.52575,-10 0/0:66.4467:15:15:515:0:0:0,-4.51545,-10 0/0:42.3643:7:7:265:0:0:0,-2.10721,-10 0/0:60.4261:13:13:478:0:0:0,-3.91339,-10 0/0:48.3849:9:9:294:0:0:0,-2.70927,-10 0/0:66.4467:15:15:555:0:0:0,-4.51545,-10 0/0:72.4673:17:17:595:0:0:0,-5.11751,-10 0/0:78.4879:19:19:708:0:0:0,-5.71957,-10 0/0:93.5385:24:24:907:0:0:0,-7.22472,-10 0/0:69.457:16:16:584:0:0:0,-4.81648,-10 0/0:39.354:6:6:228:0:0:0,-1.80618,-10 0/0:57.4158:12:12:452:0:0:0,-3.61236,-10 0/0:60.4261:13:13:467:0:0:0,-3.91339,-10 0/0:45.3746:8:8:297:0:0:0,-2.40824,-10 0/0:45.3746:8:8:280:0:0:0,-2.40824,-10 0/0:84.5085:21:21:770:0:0:0,-6.32163,-10 0/0:81.4981:20:20:751:0:0:0,-6.0206,-10 0/0:69.457:16:16:599:0:0:0,-4.81648,-10 0/0:78.4879:19:19:671:0:0:0,-5.71957,-10 0/0:66.4467:15:15:541:0:0:0,-4.51545,-10 0/0:54.4055:11:11:402:0:0:0,-3.31133,-10 0/0:69.457:16:16:585:0:0:0,-4.81648,-10 0/0:57.4158:12:12:440:0:0:0,-3.61236,-10 0/0:42.3643:7:7:264:0:0:0,-2.10721,-10 0/0:66.4467:15:15:569:0:0:0,-4.51545,-10 0/0:78.4879:19:19:715:0:0:0,-5.71957,-10 0/0:72.4673:17:17:601:0:0:0,-5.11751,-10 scaffold_222 747590 . C T 948.512 . AB=0.575758;ABP=6.30041;AC=4;AF=0.021978;AN=182;AO=41;CIGAR=1X;DP=1454;DPB=1454;DPRA=1.03062;EPP=18.3165;EPPR=5.23098;GTI=2;LEN=1;MEANALT=1;MQM=58.3659;MQMR=59.9965;NS=91;NUMALT=1;ODDS=4.48434;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1444;QR=51858;RO=1412;RPP=83.5666;RPPR=3043.13;RUN=1;SAF=28;SAP=14.9269;SAR=13;SRF=722;SRP=4.58508;SRR=690;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.6348:11:11:417:0:0:0,-3.31133,-10 0/0:41.6039:8:8:301:0:0:0,-2.40824,-10 0/0:62.676:15:15:565:0:0:0,-4.51545,-10 0/0:38.5936:7:7:260:0:0:0,-2.10721,-10 0/0:50.6348:11:11:409:0:0:0,-3.31133,-10 .:.:.:.:.:.:.:. 0/0:92.7773:25:25:901:0:0:0,-7.52575,-10 0/0:99:28:28:1052:0:0:0,-8.42884,-10 0/0:56.6554:13:13:491:0:0:0,-3.91339,-10 0/0:32.573:5:5:188:0:0:0,-1.50515,-10 0/0:0.0477959:7:6:182:1:16:-0.337888,0,-10 0/0:44.6142:9:9:337:0:0:0,-2.70927,-10 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:95.7896:26:26:960:0:0:0,-7.82678,-10 0/0:99:28:28:1016:0:0:0,-8.42884,-10 0/0:77.7275:20:20:751:0:0:0,-6.0206,-10 0/0:65.6863:16:16:596:0:0:0,-4.81648,-10 0/0:29.5627:4:4:152:0:0:0,-1.20412,-10 0/0:50.6348:11:11:394:0:0:0,-3.31133,-10 0/0:99:34:34:1234:0:0:0,-10,-10 0/0:53.6451:12:12:447:0:0:0,-3.61236,-10 0/0:98.8001:27:27:1019:0:0:0,-8.12781,-10 0/0:44.6142:9:9:333:0:0:0,-2.70927,-10 0/0:53.6451:12:12:445:0:0:0,-3.61236,-10 0/0:47.6245:10:10:331:0:0:0,-3.0103,-10 0/0:74.7172:19:19:715:0:0:0,-5.71957,-10 0/0:77.7275:20:20:710:0:0:0,-6.0206,-10 0/0:47.6245:10:10:379:0:0:0,-3.0103,-10 0/0:74.7172:19:19:708:0:0:0,-5.71957,-10 0/0:99:32:32:1202:0:0:0,-9.63296,-10 0/0:35.5833:6:6:228:0:0:0,-1.80618,-10 0/0:35.5833:6:6:228:0:0:0,-1.80618,-10 0/0:62.676:15:15:569:0:0:0,-4.51545,-10 0/0:53.6451:12:12:411:0:0:0,-3.61236,-10 0/0:74.7172:19:19:721:0:0:0,-5.71957,-10 0/0:20.5318:1:1:38:0:0:0,-0.30103,-3.8 0/0:50.6348:11:11:415:0:0:0,-3.31133,-10 0/0:98.8001:27:27:966:0:0:0,-8.12781,-10 0/0:50.6348:11:11:413:0:0:0,-3.31133,-10 0/0:46.8573:17:16:590:1:15:0,-2.38706,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:65.6863:16:16:582:0:0:0,-4.81648,-10 0/0:68.6966:17:17:591:0:0:0,-5.11751,-10 0/0:68.2648:25:24:867:1:16:0,-4.52781,-10 0/0:44.6142:9:9:335:0:0:0,-2.70927,-10 0/0:71.7069:18:18:654:0:0:0,-5.41854,-10 0/0:99:40:40:1442:0:0:0,-10,-10 0/0:62.676:15:15:566:0:0:0,-4.51545,-10 0/0:62.676:15:15:566:0:0:0,-4.51545,-10 0/0:99:41:41:1502:0:0:0,-10,-10 0/0:50.6348:11:11:387:0:0:0,-3.31133,-10 0/0:99:28:28:997:0:0:0,-8.42884,-10 0/0:50.6348:11:11:417:0:0:0,-3.31133,-10 0/0:38.5936:8:7:256:0:0:0,-2.10721,-10 0/0:99:29:29:1099:0:0:0,-8.72987,-10 0/0:44.6142:9:9:334:0:0:0,-2.70927,-10 0/0:62.676:15:15:557:0:0:0,-4.51545,-10 0/0:56.6554:13:13:431:0:0:0,-3.91339,-10 0/0:47.6245:10:10:377:0:0:0,-3.0103,-10 0/0:53.6451:12:12:450:0:0:0,-3.61236,-10 0/0:86.758:23:23:833:0:0:0,-6.92369,-10 0/0:44.6142:9:9:337:0:0:0,-2.70927,-10 0/0:95.7896:26:26:978:0:0:0,-7.82678,-10 0/0:65.6863:16:16:572:0:0:0,-4.81648,-10 0/0:38.5936:7:7:244:0:0:0,-2.10721,-10 0/0:92.7773:25:25:907:0:0:0,-7.52575,-10 0/1:99:15:9:319:6:227:-10,0,-10 0/0:38.5936:7:7:244:0:0:0,-2.10721,-10 0/0:56.6554:13:13:471:0:0:0,-3.91339,-10 0/0:44.6142:9:9:328:0:0:0,-2.70927,-10 0/0:62.676:15:15:548:0:0:0,-4.51545,-10 0/0:68.6966:17:17:642:0:0:0,-5.11751,-10 0/0:74.7172:19:19:693:0:0:0,-5.71957,-10 0/0:89.7688:24:24:898:0:0:0,-7.22472,-10 0/0:65.6863:16:16:595:0:0:0,-4.81648,-10 0/0:35.5833:6:6:228:0:0:0,-1.80618,-10 0/1:0.0283308:12:0:0:12:455:-10,-3.61236,0 0/0:56.6554:13:13:475:0:0:0,-3.91339,-10 0/0:41.6039:8:8:302:0:0:0,-2.40824,-10 0/0:41.6039:8:8:280:0:0:0,-2.40824,-10 0/0:80.7378:21:21:773:0:0:0,-6.32163,-10 0/1:99:20:8:297:12:433:-10,0,-10 0/0:62.676:15:15:547:0:0:0,-4.51545,-10 0/1:99:19:11:391:8:282:-10,0,-10 0/0:59.6657:14:14:518:0:0:0,-4.21442,-10 0/0:50.6348:11:11:407:0:0:0,-3.31133,-10 0/0:65.6863:16:16:605:0:0:0,-4.81648,-10 0/0:53.6451:12:12:449:0:0:0,-3.61236,-10 0/0:38.5936:7:7:259:0:0:0,-2.10721,-10 0/0:62.676:15:15:568:0:0:0,-4.51545,-10 0/0:74.7172:19:19:692:0:0:0,-5.71957,-10 0/0:68.6966:17:17:594:0:0:0,-5.11751,-10 scaffold_222 892822 . G C 4576.46 . AB=0.514124;ABP=3.31701;AC=19;AF=0.103261;AN=184;AO=170;CIGAR=1X;DP=1509;DPB=1509;DPRA=1.03511;EPP=6.28028;EPPR=5.36083;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9153;NS=92;NUMALT=1;ODDS=1.40269;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6285;QR=48367;RO=1334;RPP=372.161;RPPR=2899.75;RUN=1;SAF=77;SAP=6.28028;SAR=93;SRF=648;SRP=5.36083;SRR=686;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.9343:11:11:396:0:0:0,-3.31133,-10 0/0:29.8931:7:7:259:0:0:0,-2.10721,-10 0/0:53.9755:15:15:493:0:0:0,-4.51545,-10 1/1:18.8757:13:0:0:13:494:-10,-3.91339,0 0/0:35.9137:9:9:329:0:0:0,-2.70927,-10 0/0:56.9858:16:16:585:0:0:0,-4.81648,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/1:99:15:9:317:6:195:-10,0,-10 0/0:53.9755:15:15:484:0:0:0,-4.51545,-10 0/1:48.9957:8:1:38:7:265:-10,0,-2.29485 0/1:0.383884:6:0:0:6:228:-10,-1.80618,0 0/1:0.092837:4:0:0:4:142:-10,-1.20412,0 1/1:51.989:24:0:0:24:877:-10,-7.22472,0 1/1:54.9993:25:0:0:25:921:-10,-7.52575,0 0/0:87.0885:26:26:965:0:0:0,-7.82678,-10 0/0:56.9858:16:16:575:0:0:0,-4.81648,-10 0/0:87.0885:26:26:938:0:0:0,-7.82678,-10 0/0:26.8828:7:6:228:0:0:0,-1.80618,-10 0/0:75.0475:22:22:782:0:0:0,-6.62266,-10 0/0:99:39:39:1404:0:0:0,-10,-10 0/0:59.9961:17:17:619:0:0:0,-5.11751,-10 0/0:93.1082:28:28:1008:0:0:0,-8.42884,-10 0/0:32.9034:8:8:304:0:0:0,-2.40824,-10 0/0:50.9652:14:14:443:0:0:0,-4.21442,-10 0/0:75.0475:23:22:808:0:0:0,-6.62266,-10 0/0:59.9961:17:17:607:0:0:0,-5.11751,-10 0/0:99:30:30:1110:0:0:0,-9.0309,-10 0/0:32.9034:8:8:304:0:0:0,-2.40824,-10 0/0:47.9549:14:13:486:0:0:0,-3.91339,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:26.8828:6:6:223:0:0:0,-1.80618,-10 0/0:44.9446:12:12:434:0:0:0,-3.61236,-10 0/0:44.9446:12:12:419:0:0:0,-3.61236,-10 0/0:38.924:10:10:376:0:0:0,-3.0103,-10 0/0:66.0167:19:19:702:0:0:0,-5.71957,-10 0/0:35.9137:9:9:342:0:0:0,-2.70927,-10 0/0:56.9858:16:16:559:0:0:0,-4.81648,-10 0/0:87.0885:26:26:948:0:0:0,-7.82678,-10 0/0:53.9755:15:15:540:0:0:0,-4.51545,-10 0/0:50.9652:14:14:488:0:0:0,-4.21442,-10 0/0:75.0475:22:22:797:0:0:0,-6.62266,-10 0/0:41.9343:11:11:417:0:0:0,-3.31133,-10 0/0:56.9858:17:16:561:0:0:0,-4.81648,-10 0/0:87.0885:26:26:961:0:0:0,-7.82678,-10 0/0:66.0167:19:19:695:0:0:0,-5.71957,-10 0/1:48.4286:10:8:282:2:76:-5.86291,0,-10 0/1:99:31:18:677:13:485:-10,0,-10 0/0:72.0373:21:21:784:0:0:0,-6.32163,-10 0/0:32.9034:8:8:291:0:0:0,-2.40824,-10 0/0:84.0783:25:25:895:0:0:0,-7.52575,-10 0/0:41.9343:11:11:397:0:0:0,-3.31133,-10 0/0:81.0681:24:24:852:0:0:0,-7.22472,-10 0/0:35.9137:9:9:340:0:0:0,-2.70927,-10 0/1:0.80502:7:0:0:7:266:-10,-2.10721,0 0/1:99:31:12:449:19:706:-10,0,-10 0/0:47.9549:13:13:475:0:0:0,-3.91339,-10 0/0:69.027:20:20:707:0:0:0,-6.0206,-10 0/0:44.9446:12:12:430:0:0:0,-3.61236,-10 0/0:69.027:21:20:703:0:0:0,-6.0206,-10 0/0:50.9652:14:14:502:0:0:0,-4.21442,-10 0/0:84.0783:25:25:901:0:0:0,-7.52575,-10 0/0:35.9137:9:9:338:0:0:0,-2.70927,-10 0/0:96.1173:29:29:1089:0:0:0,-8.72987,-10 0/0:63.0064:18:18:683:0:0:0,-5.41854,-10 0/0:29.8931:7:7:243:0:0:0,-2.10721,-10 0/0:75.0475:22:22:790:0:0:0,-6.62266,-10 0/0:47.9549:13:13:477:0:0:0,-3.91339,-10 0/0:35.9137:9:9:340:0:0:0,-2.70927,-10 0/0:56.9858:16:16:570:0:0:0,-4.81648,-10 0/0:47.9549:13:13:454:0:0:0,-3.91339,-10 0/0:28.5362:15:14:517:1:16:0,-1.73936,-10 0/0:84.0783:25:25:897:0:0:0,-7.52575,-10 0/0:84.0783:25:25:911:0:0:0,-7.52575,-10 0/0:44.9446:12:12:430:0:0:0,-3.61236,-10 0/0:90.0985:27:27:993:0:0:0,-8.12781,-10 0/0:32.9034:8:8:302:0:0:0,-2.40824,-10 0/0:29.8931:7:7:242:0:0:0,-2.10721,-10 0/0:63.0064:18:18:639:0:0:0,-5.41854,-10 0/0:35.9137:9:9:336:0:0:0,-2.70927,-10 0/0:32.9034:8:8:294:0:0:0,-2.40824,-10 0/1:99:29:15:569:14:518:-10,0,-10 0/0:66.0167:19:19:695:0:0:0,-5.71957,-10 0/0:41.9343:11:11:414:0:0:0,-3.31133,-10 0/0:75.0475:22:22:798:0:0:0,-6.62266,-10 0/0:47.9549:13:13:483:0:0:0,-3.91339,-10 0/0:23.8725:5:5:183:0:0:0,-1.50515,-10 0/0:38.924:10:10:348:0:0:0,-3.0103,-10 0/0:38.924:10:10:358:0:0:0,-3.0103,-10 0/0:23.8725:5:5:190:0:0:0,-1.50515,-10 0/1:99:21:10:354:11:418:-10,0,-10 0/1:31.5974:15:13:492:2:72:-4.34574,0,-10 1/1:27.9066:16:0:0:16:606:-10,-4.81648,0 scaffold_222 937519 . A G 811.982 . AB=0.584906;ABP=6.32897;AC=3;AF=0.0163043;AN=184;AO=34;CIGAR=1X;DP=1479;DPB=1479;DPRA=1.39293;EPP=3.0103;EPPR=9.36821;GTI=0;LEN=1;MEANALT=1;MQM=58.9412;MQMR=59.9577;NS=92;NUMALT=1;ODDS=5.9767;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1230;QR=53217;RO=1443;RPP=76.8404;RPPR=3093.17;RUN=1;SAF=17;SAP=3.0103;SAR=17;SRF=694;SRP=7.56242;SRR=749;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.0909:10:10:324:0:0:0,-3.0103,-10 0/0:35.0497:6:6:228:0:0:0,-1.80618,-10 0/0:89.234:24:24:889:0:0:0,-7.22472,-10 0/0:29.0291:4:4:152:0:0:0,-1.20412,-10 0/0:47.0909:10:10:373:0:0:0,-3.0103,-10 0/0:41.0703:8:8:304:0:0:0,-2.40824,-10 0/0:71.1733:18:18:677:0:0:0,-5.41854,-10 0/0:65.1527:16:16:596:0:0:0,-4.81648,-10 0/0:62.1424:15:15:565:0:0:0,-4.51545,-10 0/0:26.0188:3:3:114:0:0:0,-0.90309,-10 0/0:32.0394:5:5:190:0:0:0,-1.50515,-10 0/0:35.0497:6:6:220:0:0:0,-1.80618,-10 0/0:80.2042:21:21:766:0:0:0,-6.32163,-10 0/0:65.1527:16:16:599:0:0:0,-4.81648,-10 0/1:99:17:7:266:10:379:-10,0,-10 0/1:99:23:8:303:15:554:-10,0,-10 0/1:99:13:7:255:6:228:-10,0,-10 0/0:47.0909:10:10:338:0:0:0,-3.0103,-10 0/0:92.2448:25:25:909:0:0:0,-7.52575,-10 0/0:99:40:40:1481:0:0:0,-10,-10 0/0:53.1115:12:12:456:0:0:0,-3.61236,-10 0/0:86.2242:23:23:859:0:0:0,-6.92369,-10 0/0:29.0291:4:4:141:0:0:0,-1.20412,-10 0/0:59.1321:14:14:523:0:0:0,-4.21442,-10 0/0:50.1012:11:11:418:0:0:0,-3.31133,-10 0/0:83.2144:23:22:782:0:0:0,-6.62266,-10 0/0:44.0806:9:9:329:0:0:0,-2.70927,-10 0/0:53.1115:12:12:447:0:0:0,-3.61236,-10 0/0:77.1939:20:20:745:0:0:0,-6.0206,-10 0/0:59.609:23:22:807:1:16:0,-3.96196,-10 0/0:32.0394:5:5:190:0:0:0,-1.50515,-10 0/0:62.1424:15:15:525:0:0:0,-4.51545,-10 0/0:92.2448:25:25:937:0:0:0,-7.52575,-10 0/0:44.0806:9:9:299:0:0:0,-2.70927,-10 0/0:50.1012:11:11:402:0:0:0,-3.31133,-10 0/0:44.0806:9:9:335:0:0:0,-2.70927,-10 0/0:41.0703:8:8:282:0:0:0,-2.40824,-10 0/0:83.2144:22:22:817:0:0:0,-6.62266,-10 0/0:71.1733:18:18:679:0:0:0,-5.41854,-10 0/0:59.1321:14:14:516:0:0:0,-4.21442,-10 0/0:99:29:29:1089:0:0:0,-8.72987,-10 0/0:56.1218:13:13:469:0:0:0,-3.91339,-10 0/0:56.1218:13:13:470:0:0:0,-3.91339,-10 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:53.1115:12:12:416:0:0:0,-3.61236,-10 0/0:29.0291:4:4:151:0:0:0,-1.20412,-10 0/0:99:34:34:1289:0:0:0,-10,-10 0/0:59.1321:14:14:531:0:0:0,-4.21442,-10 0/0:41.0703:8:8:294:0:0:0,-2.40824,-10 0/0:99:31:31:1103:0:0:0,-9.33193,-10 0/0:38.06:7:7:264:0:0:0,-2.10721,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/0:59.1321:15:14:506:0:0:0,-4.21442,-10 0/0:32.0394:5:5:186:0:0:0,-1.50515,-10 0/0:99:28:28:1039:0:0:0,-8.42884,-10 0/0:59.1321:14:14:530:0:0:0,-4.21442,-10 0/0:92.2448:25:25:946:0:0:0,-7.52575,-10 0/0:29.0291:4:4:152:0:0:0,-1.20412,-10 0/0:53.1115:12:12:448:0:0:0,-3.61236,-10 0/0:59.1321:14:14:521:0:0:0,-4.21442,-10 0/0:65.1527:16:16:602:0:0:0,-4.81648,-10 0/0:56.1218:13:13:489:0:0:0,-3.91339,-10 0/0:99:40:40:1480:0:0:0,-10,-10 0/0:83.2144:22:22:794:0:0:0,-6.62266,-10 0/0:71.1733:18:18:654:0:0:0,-5.41854,-10 0/0:99:30:30:1078:0:0:0,-9.0309,-10 0/0:50.1012:11:11:398:0:0:0,-3.31133,-10 0/0:56.1218:13:13:448:0:0:0,-3.91339,-10 0/0:77.1939:20:20:725:0:0:0,-6.0206,-10 0/0:74.1836:19:19:685:0:0:0,-5.71957,-10 0/0:68.163:17:17:620:0:0:0,-5.11751,-10 0/0:58.0537:30:29:1097:1:38:0,-3.75378,-10 0/0:77.1939:20:20:738:0:0:0,-6.0206,-10 0/0:99:29:29:1077:0:0:0,-8.72987,-10 0/0:66.2675:25:24:884:1:15:0,-4.62781,-10 0/0:65.1527:16:16:582:0:0:0,-4.81648,-10 0/0:68.163:17:17:630:0:0:0,-5.11751,-10 0/0:59.1321:14:14:528:0:0:0,-4.21442,-10 0/0:38.06:7:7:263:0:0:0,-2.10721,-10 0/0:32.0394:5:5:190:0:0:0,-1.50515,-10 0/0:99:34:34:1250:0:0:0,-10,-10 0/0:86.2242:23:23:857:0:0:0,-6.92369,-10 0/0:74.1836:19:19:708:0:0:0,-5.71957,-10 0/0:62.1424:15:15:547:0:0:0,-4.51545,-10 0/0:62.1424:15:15:565:0:0:0,-4.51545,-10 0/0:38.06:7:7:261:0:0:0,-2.10721,-10 0/0:41.0703:8:8:282:0:0:0,-2.40824,-10 0/0:41.0703:8:8:304:0:0:0,-2.40824,-10 0/0:26.0188:3:3:114:0:0:0,-0.90309,-10 0/0:59.1321:14:14:517:0:0:0,-4.21442,-10 0/0:56.1218:13:13:494:0:0:0,-3.91339,-10 0/0:50.1012:11:11:395:0:0:0,-3.31133,-10 scaffold_222 937535 . T A 186.67 . AB=0.36;ABP=7.26639;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1485;DPB=1485;DPRA=1.55822;EPP=3.25157;EPPR=4.00482;GTI=0;LEN=1;MEANALT=1;MQM=56;MQMR=59.9587;NS=92;NUMALT=1;ODDS=9.83692;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=318;QR=54349;RO=1476;RPP=22.5536;RPPR=3053.66;RUN=1;SAF=5;SAP=3.25157;SAR=4;SRF=709;SRP=7.95937;SRR=767;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:63.7946:10:10:332:0:0:0,-3.0103,-10 0/0:51.7534:6:6:224:0:0:0,-1.80618,-10 0/0:99:24:24:906:0:0:0,-7.22472,-10 0/0:45.7328:4:4:151:0:0:0,-1.20412,-10 0/0:63.7946:10:10:356:0:0:0,-3.0103,-10 0/0:57.774:8:8:302:0:0:0,-2.40824,-10 0/0:87.8768:18:18:675:0:0:0,-5.41854,-10 0/0:81.8564:16:16:602:0:0:0,-4.81648,-10 0/0:78.8461:15:15:570:0:0:0,-4.51545,-10 0/0:42.7225:3:3:114:0:0:0,-0.90309,-10 0/0:48.7431:5:5:168:0:0:0,-1.50515,-10 0/0:51.7534:6:6:219:0:0:0,-1.80618,-10 0/0:96.906:21:21:788:0:0:0,-6.32163,-10 0/0:81.8564:16:16:593:0:0:0,-4.81648,-10 0/0:84.8666:17:17:620:0:0:0,-5.11751,-10 0/0:99:23:23:864:0:0:0,-6.92369,-10 0/0:72.8255:13:13:491:0:0:0,-3.91339,-10 0/0:63.7946:10:10:345:0:0:0,-3.0103,-10 0/0:99:25:25:943:0:0:0,-7.52575,-10 0/0:99:40:40:1451:0:0:0,-10,-10 0/0:69.8152:12:12:450:0:0:0,-3.61236,-10 0/0:99:23:23:863:0:0:0,-6.92369,-10 0/0:45.7328:4:4:152:0:0:0,-1.20412,-10 0/0:78.8461:15:15:551:0:0:0,-4.51545,-10 0/0:66.8049:11:11:415:0:0:0,-3.31133,-10 0/0:99:24:24:856:0:0:0,-7.22472,-10 0/0:60.7843:9:9:339:0:0:0,-2.70927,-10 0/0:69.8152:12:12:437:0:0:0,-3.61236,-10 0/0:93.8967:20:20:755:0:0:0,-6.0206,-10 0/0:99:23:23:834:0:0:0,-6.92369,-10 0/0:48.7431:5:5:188:0:0:0,-1.50515,-10 0/0:78.8461:15:15:548:0:0:0,-4.51545,-10 0/0:99:25:25:932:0:0:0,-7.52575,-10 0/0:60.7843:9:9:311:0:0:0,-2.70927,-10 0/0:66.8049:11:11:389:0:0:0,-3.31133,-10 0/0:60.7843:9:9:340:0:0:0,-2.70927,-10 0/0:57.774:8:8:301:0:0:0,-2.40824,-10 0/0:99:23:23:862:0:0:0,-6.92369,-10 0/0:87.8768:18:18:673:0:0:0,-5.41854,-10 0/0:75.8358:14:14:529:0:0:0,-4.21442,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:72.8255:13:13:483:0:0:0,-3.91339,-10 0/0:75.8358:14:14:516:0:0:0,-4.21442,-10 0/0:99:30:30:1062:0:0:0,-9.0309,-10 0/0:69.8152:12:12:442:0:0:0,-3.61236,-10 0/0:45.7328:4:4:135:0:0:0,-1.20412,-10 0/0:99:35:35:1279:0:0:0,-10,-10 0/0:75.8358:14:14:532:0:0:0,-4.21442,-10 0/0:57.774:8:8:282:0:0:0,-2.40824,-10 0/0:99:31:31:1163:0:0:0,-9.33193,-10 0/0:54.7637:7:7:259:0:0:0,-2.10721,-10 0/0:99:38:38:1390:0:0:0,-10,-10 0/0:78.8461:15:15:548:0:0:0,-4.51545,-10 0/0:48.7431:5:5:189:0:0:0,-1.50515,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:75.8358:14:14:528:0:0:0,-4.21442,-10 0/0:99:25:25:948:0:0:0,-7.52575,-10 0/0:45.7328:4:4:146:0:0:0,-1.20412,-10 0/0:69.8152:12:12:450:0:0:0,-3.61236,-10 0/0:75.8358:14:14:530:0:0:0,-4.21442,-10 0/0:81.8564:16:16:608:0:0:0,-4.81648,-10 0/0:72.8255:13:13:489:0:0:0,-3.91339,-10 0/0:99:40:40:1422:0:0:0,-10,-10 0/0:99:22:22:813:0:0:0,-6.62266,-10 0/0:90.8869:19:19:675:0:0:0,-5.71957,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:66.8049:11:11:405:0:0:0,-3.31133,-10 0/0:72.8255:13:13:489:0:0:0,-3.91339,-10 0/0:93.8967:20:20:720:0:0:0,-6.0206,-10 0/0:90.8869:19:19:716:0:0:0,-5.71957,-10 0/0:84.8666:17:17:642:0:0:0,-5.11751,-10 0/0:99:30:30:1116:0:0:0,-9.0309,-10 0/0:93.8967:20:20:748:0:0:0,-6.0206,-10 0/0:99:29:29:1073:0:0:0,-8.72987,-10 0/1:99:25:16:552:9:318:-10,0,-10 0/0:81.8564:16:16:583:0:0:0,-4.81648,-10 0/0:84.8666:17:17:591:0:0:0,-5.11751,-10 0/0:75.8358:14:14:529:0:0:0,-4.21442,-10 0/0:54.7637:7:7:259:0:0:0,-2.10721,-10 0/0:48.7431:5:5:186:0:0:0,-1.50515,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:90.8869:19:19:677:0:0:0,-5.71957,-10 0/0:78.8461:15:15:556:0:0:0,-4.51545,-10 0/0:78.8461:15:15:561:0:0:0,-4.51545,-10 0/0:54.7637:7:7:234:0:0:0,-2.10721,-10 0/0:57.774:8:8:293:0:0:0,-2.40824,-10 0/0:57.774:8:8:304:0:0:0,-2.40824,-10 0/0:42.7225:3:3:114:0:0:0,-0.90309,-10 0/0:75.8358:14:14:503:0:0:0,-4.21442,-10 0/0:72.8255:13:13:494:0:0:0,-3.91339,-10 0/0:66.8049:11:11:369:0:0:0,-3.31133,-10 scaffold_222 1023962 . T C 757.29 . AB=0.559322;ABP=4.81373;AC=5;AF=0.0271739;AN=184;AO=34;CIGAR=1X;DP=1440;DPB=1440;DPRA=0.865488;EPP=5.30951;EPPR=10.1721;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9408;NS=92;NUMALT=1;ODDS=6.85305;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1197;QR=51660;RO=1402;RPP=76.8404;RPPR=2893.08;RUN=1;SAF=14;SAP=5.30951;SAR=20;SRF=719;SRP=5.0176;SRR=683;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.8804:11:11:416:0:0:0,-3.31133,-10 0/0:77.9422:17:17:623:0:0:0,-5.11751,-10 0/1:99:21:9:329:12:414:-10,0,-10 0/0:47.8392:7:7:264:0:0:0,-2.10721,-10 0/0:71.9216:15:15:529:0:0:0,-4.51545,-10 0/0:59.8804:11:11:415:0:0:0,-3.31133,-10 0/0:99:38:38:1433:0:0:0,-10,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:86.9729:20:20:713:0:0:0,-6.0206,-10 0/0:29.7774:1:1:38:0:0:0,-0.30103,-3.8 0/0:41.8186:5:5:190:0:0:0,-1.50515,-10 0/0:32.7877:2:2:75:0:0:0,-0.60206,-7.125 0/0:62.8907:13:12:428:0:0:0,-3.61236,-10 0/0:71.4185:23:22:791:1:14:0,-4.16196,-10 0/0:99:27:27:979:0:0:0,-8.12781,-10 0/0:99:26:26:968:0:0:0,-7.82678,-10 0/0:89.9835:21:21:791:0:0:0,-6.32163,-10 0/0:47.8392:7:7:265:0:0:0,-2.10721,-10 0/0:92.9938:22:22:826:0:0:0,-6.62266,-10 0/0:99:33:33:1187:0:0:0,-9.93399,-10 0/0:53.8598:9:9:340:0:0:0,-2.70927,-10 0/0:74.9319:16:16:597:0:0:0,-4.81648,-10 0/0:50.8495:8:8:282:0:0:0,-2.40824,-10 0/0:65.901:13:13:487:0:0:0,-3.91339,-10 0/0:74.9319:16:16:605:0:0:0,-4.81648,-10 0/0:92.9938:22:22:821:0:0:0,-6.62266,-10 0/0:71.9216:15:15:567:0:0:0,-4.51545,-10 0/0:53.8598:9:9:319:0:0:0,-2.70927,-10 0/0:62.8907:12:12:427:0:0:0,-3.61236,-10 0/0:92.9938:22:22:806:0:0:0,-6.62266,-10 0/0:41.8186:5:5:190:0:0:0,-1.50515,-10 0/0:47.8392:7:7:265:0:0:0,-2.10721,-10 0/0:68.9113:14:14:514:0:0:0,-4.21442,-10 0/0:59.8804:11:11:417:0:0:0,-3.31133,-10 0/0:71.9216:15:15:551:0:0:0,-4.51545,-10 0/0:59.8804:11:11:387:0:0:0,-3.31133,-10 0/0:65.901:13:13:471:0:0:0,-3.91339,-10 0/0:99:25:25:948:0:0:0,-7.52575,-10 0/0:59.8804:11:11:368:0:0:0,-3.31133,-10 0/0:65.901:13:13:480:0:0:0,-3.91339,-10 0/0:99:25:25:914:0:0:0,-7.52575,-10 0/0:80.9524:19:18:663:0:0:0,-5.41854,-10 0/0:80.9524:18:18:672:0:0:0,-5.41854,-10 0/0:99:24:24:898:0:0:0,-7.22472,-10 0/0:56.8701:10:10:380:0:0:0,-3.0103,-10 0/0:77.9422:17:17:622:0:0:0,-5.11751,-10 0/0:99:39:39:1467:0:0:0,-10,-10 0/0:99:30:30:1125:0:0:0,-9.0309,-10 0/0:62.8907:12:12:432:0:0:0,-3.61236,-10 0/0:96.0023:23:23:836:0:0:0,-6.92369,-10 0/0:74.9319:16:16:603:0:0:0,-4.81648,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:71.9216:15:15:561:0:0:0,-4.51545,-10 0/0:32.7877:2:2:74:0:0:0,-0.60206,-7.03 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:47.8392:8:7:261:0:0:0,-2.10721,-10 0/0:86.9729:20:20:752:0:0:0,-6.0206,-10 0/0:35.798:3:3:110:0:0:0,-0.90309,-10 0/0:62.8907:12:12:454:0:0:0,-3.61236,-10 0/0:56.8701:10:10:353:0:0:0,-3.0103,-10 0/0:99:33:33:1193:0:0:0,-9.93399,-10 0/0:59.8804:11:11:413:0:0:0,-3.31133,-10 0/0:99:41:41:1540:0:0:0,-10,-10 0/0:80.9524:18:18:661:0:0:0,-5.41854,-10 0/0:41.8186:5:5:188:0:0:0,-1.50515,-10 0/0:74.9319:16:16:592:0:0:0,-4.81648,-10 0/0:59.8804:11:11:383:0:0:0,-3.31133,-10 0/0:50.8495:8:8:302:0:0:0,-2.40824,-10 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:74.9319:16:16:606:0:0:0,-4.81648,-10 0/0:77.9422:17:17:631:0:0:0,-5.11751,-10 0/0:83.9627:19:19:695:0:0:0,-5.71957,-10 0/0:83.9627:19:19:694:0:0:0,-5.71957,-10 0/0:56.8701:10:10:378:0:0:0,-3.0103,-10 0/0:71.9216:15:15:566:0:0:0,-4.51545,-10 0/0:83.9627:19:19:698:0:0:0,-5.71957,-10 0/0:62.8907:12:12:456:0:0:0,-3.61236,-10 0/0:56.8701:10:10:373:0:0:0,-3.0103,-10 0/0:50.8495:8:8:295:0:0:0,-2.40824,-10 0/0:53.8598:9:9:338:0:0:0,-2.70927,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:80.9524:18:18:655:0:0:0,-5.41854,-10 0/0:59.8804:11:11:395:0:0:0,-3.31133,-10 0/0:71.9216:15:15:532:0:0:0,-4.51545,-10 0/0:71.9216:15:15:569:0:0:0,-4.51545,-10 0/0:35.798:3:3:87:0:0:0,-0.90309,-8.12 0/0:50.8495:8:8:275:0:0:0,-2.40824,-10 0/0:56.8701:11:10:358:0:0:0,-3.0103,-10 0/1:37.9572:4:2:54:2:74:-6.60403,0,-4.70403 0/1:63.0906:11:8:304:3:114:-9.54615,0,-10 0/1:99:13:7:262:6:227:-10,0,-10 0/1:0.00137882:10:0:0:10:354:-10,-3.0103,0 scaffold_222 1094195 . A G 110.057 . AB=0.6;ABP=3.87889;AC=1;AF=0.00549451;AN=182;AO=7;CIGAR=1X;DP=1694;DPB=1694;DPRA=0.693645;EPP=5.80219;EPPR=6.10082;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=91;NUMALT=1;ODDS=12.4709;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=242;QR=61918;RO=1687;RPP=18.2106;RPPR=3640.27;RUN=1;SAF=2;SAP=5.80219;SAR=5;SRF=816;SRP=6.90402;SRR=871;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.2222:8:8:282:0:0:0,-2.40824,-10 0/0:69.2119:7:7:265:0:0:0,-2.10721,-10 0/0:99:20:20:747:0:0:0,-6.0206,-10 0/0:87.2734:13:13:447:0:0:0,-3.91339,-10 0/1:99:10:4:152:6:228:-10,0,-10 0/0:63.1913:5:5:190:0:0:0,-1.50515,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:99:28:28:1022:0:0:0,-8.42884,-10 0/0:87.2734:13:13:488:0:0:0,-3.91339,-10 .:.:.:.:.:.:.:. 0/0:78.2427:10:10:336:0:0:0,-3.0103,-10 0/0:60.181:4:4:152:0:0:0,-1.20412,-10 0/0:99:36:36:1293:0:0:0,-10,-10 0/0:99:38:38:1367:0:0:0,-10,-10 0/0:99:41:41:1520:0:0:0,-10,-10 0/0:81.253:11:11:418:0:0:0,-3.31133,-10 0/0:99:27:27:1006:0:0:0,-8.12781,-10 0/0:75.2325:9:9:342:0:0:0,-2.70927,-10 0/0:99:30:30:1070:0:0:0,-9.0309,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:99:22:22:771:0:0:0,-6.62266,-10 0/0:99:34:34:1265:0:0:0,-10,-10 0/0:63.1913:5:5:180:0:0:0,-1.50515,-10 0/0:99:17:17:641:0:0:0,-5.11751,-10 0/0:99:24:24:896:0:0:0,-7.22472,-10 0/0:99:27:27:1020:0:0:0,-8.12781,-10 0/0:87.2734:13:13:479:0:0:0,-3.91339,-10 0/0:75.2325:9:9:333:0:0:0,-2.70927,-10 0/0:99:17:17:637:0:0:0,-5.11751,-10 0/0:99:27:27:1024:0:0:0,-8.12781,-10 0/0:96.3024:16:16:575:0:0:0,-4.81648,-10 0/0:54.1604:2:2:76:0:0:0,-0.60206,-7.22 0/0:87.2734:13:13:470:0:0:0,-3.91339,-10 0/0:84.2632:12:12:422:0:0:0,-3.61236,-10 0/0:87.2734:13:13:483:0:0:0,-3.91339,-10 0/0:69.2119:7:7:256:0:0:0,-2.10721,-10 0/0:93.2932:15:15:569:0:0:0,-4.51545,-10 0/0:99:26:26:932:0:0:0,-7.82678,-10 0/0:87.2734:13:13:493:0:0:0,-3.91339,-10 0/0:93.2932:15:15:500:0:0:0,-4.51545,-10 0/0:99:22:22:827:0:0:0,-6.62266,-10 0/0:99:17:17:615:0:0:0,-5.11751,-10 0/0:90.2834:14:14:508:0:0:0,-4.21442,-10 0/0:99:29:29:1057:0:0:0,-8.72987,-10 0/0:99:20:20:730:0:0:0,-6.0206,-10 0/0:84.2632:12:12:455:0:0:0,-3.61236,-10 0/0:99:37:37:1349:0:0:0,-10,-10 0/0:99:20:20:711:0:0:0,-6.0206,-10 0/0:90.2834:14:14:529:0:0:0,-4.21442,-10 0/0:99:33:33:1169:0:0:0,-9.93399,-10 0/0:99:17:17:628:0:0:0,-5.11751,-10 0/0:99:35:35:1253:0:0:0,-10,-10 0/0:99:17:17:623:0:0:0,-5.11751,-10 0/0:72.2222:8:8:304:0:0:0,-2.40824,-10 0/0:99:35:35:1309:0:0:0,-10,-10 0/0:75.2325:9:9:340:0:0:0,-2.70927,-10 0/0:99:18:18:679:0:0:0,-5.41854,-10 0/0:63.1913:5:5:188:0:0:0,-1.50515,-10 0/0:72.2222:8:8:301:0:0:0,-2.40824,-10 0/0:69.2119:7:7:263:0:0:0,-2.10721,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:81.253:11:11:418:0:0:0,-3.31133,-10 0/0:99:29:29:1062:0:0:0,-8.72987,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:96.3024:16:16:573:0:0:0,-4.81648,-10 0/0:99:30:30:1075:0:0:0,-9.0309,-10 0/0:99:23:23:833:0:0:0,-6.92369,-10 0/0:84.2632:12:12:448:0:0:0,-3.61236,-10 0/0:99:36:36:1347:0:0:0,-10,-10 0/0:99:17:17:635:0:0:0,-5.11751,-10 0/0:99:21:21:746:0:0:0,-6.32163,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:99:20:20:759:0:0:0,-6.0206,-10 0/0:87.2734:13:13:491:0:0:0,-3.91339,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:66.2016:6:6:217:0:0:0,-1.80618,-10 0/0:87.2734:13:13:494:0:0:0,-3.91339,-10 0/0:64.1652:16:15:558:1:14:0,-2.21236,-10 0/0:87.2734:13:13:472:0:0:0,-3.91339,-10 0/0:78.2427:10:10:380:0:0:0,-3.0103,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:99:33:33:1233:0:0:0,-9.93399,-10 0/0:99:27:27:968:0:0:0,-8.12781,-10 0/0:93.2932:15:15:567:0:0:0,-4.51545,-10 0/0:99:20:20:727:0:0:0,-6.0206,-10 0/0:72.2222:8:8:261:0:0:0,-2.40824,-10 0/0:99:18:18:674:0:0:0,-5.41854,-10 0/0:78.2427:10:10:369:0:0:0,-3.0103,-10 0/0:72.2222:8:8:282:0:0:0,-2.40824,-10 0/0:96.3024:16:16:582:0:0:0,-4.81648,-10 0/0:93.2932:15:15:548:0:0:0,-4.51545,-10 0/0:99:19:19:706:0:0:0,-5.71957,-10 scaffold_222 1094199 . T C 1149.76 . AB=0.52381;ABP=3.42391;AC=3;AF=0.0164835;AN=182;AO=44;CIGAR=1X;DP=1694;DPB=1694;DPRA=1.53043;EPP=3.0103;EPPR=7.28872;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=91;NUMALT=1;ODDS=2.77652;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1595;QR=59801;RO=1649;RPP=98.5551;RPPR=3566.42;RUN=1;SAF=22;SAP=3.0103;SAR=22;SRF=796;SRP=7.28872;SRR=853;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:30.6083:8:8:295:0:0:0,-2.40824,-10 0/0:27.598:7:7:240:0:0:0,-2.10721,-10 0/0:66.7319:20:20:748:0:0:0,-6.0206,-10 0/0:45.6598:13:13:454:0:0:0,-3.91339,-10 0/0:36.6289:10:10:354:0:0:0,-3.0103,-10 0/0:21.5774:5:5:184:0:0:0,-1.50515,-10 0/0:90.8129:28:28:1016:0:0:0,-8.42884,-10 0/0:90.8129:28:28:1054:0:0:0,-8.42884,-10 0/0:45.6598:13:13:482:0:0:0,-3.91339,-10 .:.:.:.:.:.:.:. 0/0:36.6289:10:10:346:0:0:0,-3.0103,-10 0/0:18.5671:4:4:152:0:0:0,-1.20412,-10 0/0:99:36:36:1297:0:0:0,-10,-10 0/0:99:38:38:1355:0:0:0,-10,-10 0/0:99:41:41:1495:0:0:0,-10,-10 0/0:39.6392:11:11:413:0:0:0,-3.31133,-10 0/0:87.8033:27:27:977:0:0:0,-8.12781,-10 0/0:33.6186:9:9:319:0:0:0,-2.70927,-10 0/0:96.8342:30:30:1047:0:0:0,-9.0309,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:72.7525:22:22:777:0:0:0,-6.62266,-10 0/0:99:34:34:1203:0:0:0,-10,-10 0/0:21.5774:5:5:135:0:0:0,-1.50515,-10 0/0:57.701:17:17:632:0:0:0,-5.11751,-10 0/0:78.7731:24:24:849:0:0:0,-7.22472,-10 0/1:99:27:12:442:15:558:-10,0,-10 0/0:45.6598:13:13:470:0:0:0,-3.91339,-10 0/0:33.6186:9:9:338:0:0:0,-2.70927,-10 0/0:57.701:17:17:645:0:0:0,-5.11751,-10 0/0:87.8033:27:27:1007:0:0:0,-8.12781,-10 0/0:54.6907:16:16:580:0:0:0,-4.81648,-10 0/0:12.5465:2:2:76:0:0:0,-0.60206,-7.22 0/0:45.6598:13:13:465:0:0:0,-3.91339,-10 0/0:42.6495:12:12:450:0:0:0,-3.61236,-10 0/0:45.6598:13:13:484:0:0:0,-3.91339,-10 0/0:27.598:7:7:256:0:0:0,-2.10721,-10 0/0:51.6804:15:15:560:0:0:0,-4.51545,-10 0/0:84.7937:26:26:954:0:0:0,-7.82678,-10 0/0:45.6598:13:13:481:0:0:0,-3.91339,-10 0/0:51.6804:15:15:514:0:0:0,-4.51545,-10 0/1:99:22:10:379:12:433:-10,0,-10 0/0:57.701:17:17:597:0:0:0,-5.11751,-10 0/0:48.6701:14:14:494:0:0:0,-4.21442,-10 0/0:93.8219:29:29:1089:0:0:0,-8.72987,-10 0/0:66.7319:20:20:733:0:0:0,-6.0206,-10 0/0:42.6495:12:12:445:0:0:0,-3.61236,-10 0/0:99:37:37:1328:0:0:0,-10,-10 0/0:66.7319:20:20:704:0:0:0,-6.0206,-10 0/0:48.6701:14:14:531:0:0:0,-4.21442,-10 0/0:99:33:33:1195:0:0:0,-9.93399,-10 0/0:57.701:17:17:616:0:0:0,-5.11751,-10 0/1:99:35:18:585:17:604:-10,0,-10 0/0:57.701:17:17:609:0:0:0,-5.11751,-10 0/0:30.6083:8:8:300:0:0:0,-2.40824,-10 0/0:99:35:35:1236:0:0:0,-10,-10 0/0:33.6186:9:9:340:0:0:0,-2.70927,-10 0/0:60.7113:18:18:655:0:0:0,-5.41854,-10 0/0:21.5774:5:5:184:0:0:0,-1.50515,-10 0/0:30.6083:8:8:300:0:0:0,-2.40824,-10 0/0:27.598:7:7:264:0:0:0,-2.10721,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:39.6392:11:11:415:0:0:0,-3.31133,-10 0/0:90.8129:29:28:999:0:0:0,-8.42884,-10 0/0:81.7834:25:25:947:0:0:0,-7.52575,-10 0/0:54.6907:16:16:595:0:0:0,-4.81648,-10 0/0:96.8342:30:30:1048:0:0:0,-9.0309,-10 0/0:75.7628:23:23:826:0:0:0,-6.92369,-10 0/0:42.6495:12:12:394:0:0:0,-3.61236,-10 0/0:99:36:36:1302:0:0:0,-10,-10 0/0:57.701:17:17:612:0:0:0,-5.11751,-10 0/0:69.7422:21:21:781:0:0:0,-6.32163,-10 0/0:93.8219:29:29:1064:0:0:0,-8.72987,-10 0/0:66.7319:20:20:749:0:0:0,-6.0206,-10 0/0:45.6598:13:13:456:0:0:0,-3.91339,-10 0/0:75.7628:23:23:803:0:0:0,-6.92369,-10 0/0:24.5877:6:6:203:0:0:0,-1.80618,-10 0/0:45.6598:13:13:492:0:0:0,-3.91339,-10 0/0:54.6907:16:16:572:0:0:0,-4.81648,-10 0/0:45.6598:13:13:478:0:0:0,-3.91339,-10 0/0:36.6289:10:10:379:0:0:0,-3.0103,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/0:99:33:33:1245:0:0:0,-9.93399,-10 0/0:87.8033:27:27:968:0:0:0,-8.12781,-10 0/0:51.6804:15:15:562:0:0:0,-4.51545,-10 0/0:66.7319:20:20:744:0:0:0,-6.0206,-10 0/0:30.6083:8:8:300:0:0:0,-2.40824,-10 0/0:60.7113:18:18:660:0:0:0,-5.41854,-10 0/0:36.6289:10:10:289:0:0:0,-3.0103,-10 0/0:30.6083:8:8:277:0:0:0,-2.40824,-10 0/0:54.6907:16:16:583:0:0:0,-4.81648,-10 0/0:51.6804:15:15:538:0:0:0,-4.51545,-10 0/0:63.7216:19:19:721:0:0:0,-5.71957,-10 scaffold_222 1176294 . G A 2073.79 . AB=0.534247;ABP=4.49761;AC=7;AF=0.0384615;AN=182;AO=79;CIGAR=1X;DP=1813;DPB=1813;DPRA=1.11546;EPP=5.23675;EPPR=5.21934;GTI=2;LEN=1;MEANALT=1;MQM=59.6203;MQMR=59.9666;NS=91;NUMALT=1;ODDS=0.727496;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2933;QR=62919;RO=1734;RPP=174.557;RPPR=3768.34;RUN=1;SAF=44;SAP=5.23675;SAR=35;SRF=888;SRP=5.21934;SRR=846;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:41.1466:8:8:289:0:0:0,-2.40824,-10 0/0:35.126:6:6:223:0:0:0,-1.80618,-10 0/0:80.2805:21:21:774:0:0:0,-6.32163,-10 0/0:41.1466:8:8:304:0:0:0,-2.40824,-10 0/1:75.4387:10:7:257:3:110:-9.33555,0,-10 0/0:59.2084:14:14:508:0:0:0,-4.21442,-10 0/0:99:44:44:1598:0:0:0,-10,-10 0/0:99:31:31:1109:0:0:0,-9.33193,-10 0/0:83.2907:22:22:821:0:0:0,-6.62266,-10 .:.:.:.:.:.:.:. 0/0:59.2084:14:14:518:0:0:0,-4.21442,-10 0/0:35.126:6:6:224:0:0:0,-1.80618,-10 0/1:99:35:17:604:18:674:-10,0,-10 0/0:78.5238:30:29:1065:1:16:0,-5.95378,-10 0/0:89.3108:24:24:872:0:0:0,-7.22472,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 0/0:99:29:29:1050:0:0:0,-8.72987,-10 0/0:29.1054:4:4:150:0:0:0,-1.20412,-10 0/0:71.2496:18:18:663:0:0:0,-5.41854,-10 0/0:99:35:35:1259:0:0:0,-10,-10 0/0:74.2599:19:19:699:0:0:0,-5.71957,-10 0/0:99:39:39:1434:0:0:0,-10,-10 0/0:50.1775:11:11:406:0:0:0,-3.31133,-10 0/1:99:22:15:538:7:266:-10,0,-10 0/1:1.65912:16:0:0:16:590:-10,-4.81648,0 0/0:99:28:28:1011:0:0:0,-8.42884,-10 0/0:92.3222:25:25:911:0:0:0,-7.52575,-10 0/1:0.0870532:12:0:0:12:456:-10,-3.61236,0 0/0:83.2907:22:22:800:0:0:0,-6.62266,-10 0/1:99:27:16:571:11:415:-10,0,-10 0/0:26.0951:3:3:114:0:0:0,-0.90309,-10 0/0:41.1466:8:8:296:0:0:0,-2.40824,-10 0/0:71.2496:18:18:681:0:0:0,-5.41854,-10 0/0:53.1878:12:12:427:0:0:0,-3.61236,-10 0/0:62.2187:15:15:539:0:0:0,-4.51545,-10 0/0:41.1466:8:8:260:0:0:0,-2.40824,-10 0/0:53.1878:12:12:441:0:0:0,-3.61236,-10 0/0:99:37:37:1330:0:0:0,-10,-10 0/0:74.2599:19:19:693:0:0:0,-5.71957,-10 0/0:74.2599:19:19:696:0:0:0,-5.71957,-10 0/0:99:38:38:1383:0:0:0,-10,-10 0/0:68.2393:17:17:609:0:0:0,-5.11751,-10 0/0:86.3008:23:23:818:0:0:0,-6.92369,-10 0/0:95.3297:26:26:967:0:0:0,-7.82678,-10 0/0:71.2496:18:18:634:0:0:0,-5.41854,-10 0/0:71.2496:18:18:668:0:0:0,-5.41854,-10 0/0:99:36:36:1284:0:0:0,-10,-10 0/0:89.3108:24:24:866:0:0:0,-7.22472,-10 0/0:62.2187:15:15:558:0:0:0,-4.51545,-10 0/1:99:24:13:450:11:406:-10,0,-10 0/0:59.2084:14:14:493:0:0:0,-4.21442,-10 0/0:86.3008:23:23:835:0:0:0,-6.92369,-10 0/0:53.1878:12:12:440:0:0:0,-3.61236,-10 0/0:41.1466:8:8:278:0:0:0,-2.40824,-10 0/0:99:43:43:1540:0:0:0,-10,-10 0/0:92.3222:25:25:917:0:0:0,-7.52575,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:41.1466:8:8:298:0:0:0,-2.40824,-10 0/0:53.1878:12:12:450:0:0:0,-3.61236,-10 0/0:41.1466:8:8:299:0:0:0,-2.40824,-10 0/0:98.3376:27:27:958:0:0:0,-8.12781,-10 0/0:59.2084:14:14:512:0:0:0,-4.21442,-10 0/0:99:41:41:1483:0:0:0,-10,-10 0/0:65.229:16:16:576:0:0:0,-4.81648,-10 0/0:47.1672:10:10:358:0:0:0,-3.0103,-10 0/0:92.3222:25:25:915:0:0:0,-7.52575,-10 0/0:71.2496:18:18:666:0:0:0,-5.41854,-10 0/0:47.1672:10:10:364:0:0:0,-3.0103,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:38.1363:7:7:242:0:0:0,-2.10721,-10 0/0:71.2496:18:18:639:0:0:0,-5.41854,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:44.1569:9:9:334:0:0:0,-2.70927,-10 0/0:95.3297:26:26:943:0:0:0,-7.82678,-10 0/0:47.1672:10:10:380:0:0:0,-3.0103,-10 0/0:92.3222:25:25:858:0:0:0,-7.52575,-10 0/0:59.2084:14:14:480:0:0:0,-4.21442,-10 0/0:44.1569:9:9:326:0:0:0,-2.70927,-10 0/0:47.1672:10:10:375:0:0:0,-3.0103,-10 0/0:99:33:33:1170:0:0:0,-9.93399,-10 0/0:99:35:35:1307:0:0:0,-10,-10 0/0:65.229:16:16:581:0:0:0,-4.81648,-10 0/0:77.2702:20:20:746:0:0:0,-6.0206,-10 0/0:92.3222:25:25:920:0:0:0,-7.52575,-10 0/0:38.1363:7:7:256:0:0:0,-2.10721,-10 0/0:77.2702:20:20:714:0:0:0,-6.0206,-10 0/0:47.1672:10:10:347:0:0:0,-3.0103,-10 0/0:44.1569:9:9:320:0:0:0,-2.70927,-10 0/0:89.3108:24:24:887:0:0:0,-7.22472,-10 0/0:99:30:30:1112:0:0:0,-9.0309,-10 0/0:68.2393:17:17:634:0:0:0,-5.11751,-10 scaffold_222 1252245 . G T 32445.8 . AB=0.584906;ABP=9.64763;AC=178;AF=0.978021;AN=182;AO=82;CIGAR=1X1M1X;DP=1138;DPB=1138.33;DPRA=1.26408;EPP=5.65844;EPPR=3.32051;GTI=5;LEN=1;MEANALT=1.88889;MQM=59.1829;MQMR=60;NS=91;NUMALT=2;ODDS=1.75415;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=18.5;PQR=0;PRO=0;QA=2821;QR=1036;RO=28;RPP=181.071;RPPR=63.8115;RUN=1;SAF=46;SAP=5.65844;SAR=36;SRF=13;SRP=3.32051;SRR=15;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1|1:47.1871:10:0:0:10,0:347,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:38.1562:7:0:0:7,0:221,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:99:12:0:0:5,6:181,192:-10,-10,-10,-10,0,-10 1|1:24.0602:19:0:0:0,19:0,654:-10,-10,-10,-5.71957,-5.71957,0 1|1:41.1665:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:56.218:13:0:0:13,0:491,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:80.3004:21:0:0:21,0:760,0:-10,-6.32163,0,-10,-6.32163,-10 1|1:83.3107:22:0:0:22,0:808,0:-10,-6.62266,0,-10,-6.62266,-10 1|1:41.1665:8:0:0:8,0:264,0:-10,-2.40824,0,-10,-2.40824,-10 .:.:.:.:.:.:.:. 1|1:32.1356:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:23.1047:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 1|1:99:19:0:0:6,12:218,416:-10,-10,-10,-10,0,-10 1|1:89.3312:24:0:0:24,0:889,0:-10,-7.22472,0,-10,-7.22472,-10 1|1:77.2901:20:0:0:20,0:748,0:-10,-6.0206,0,-10,-6.0206,-10 1|1:65.2489:17:0:0:16,0:576,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:99:30:0:0:18,12:641,436:-10,-10,-10,-10,0,-10 1|1:35.1459:6:0:0:6,0:206,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:56.218:13:0:0:13,0:475,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:80.3004:21:0:0:21,0:756,0:-10,-6.32163,0,-10,-6.32163,-10 1|1:62.2386:15:0:0:15,0:542,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:99:23:0:0:13,10:490,349:-10,-10,-10,-10,0,-10 1|1:29.1253:4:0:0:4,0:139,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:44.1768:9:0:0:9,0:338,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:59.2283:14:0:0:14,0:532,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:47.1871:11:0:0:10,0:322,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:37.2232:14:0:0:12,1:424,15:-10,-3.61236,0,-10,-1.44945,-10 1|1:38.1562:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:59.2283:14:0:0:14,0:505,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:95.3499:26:0:0:26,0:956,0:-10,-7.82678,0,-10,-7.82678,-10 1|1:47.1871:10:0:0:10,0:356,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:38.1562:7:0:0:7,0:199,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:53.2077:12:0:0:12,0:432,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:0.00971278:5:0:0:0,5:0,166:-10,-10,-10,-1.50515,-1.50515,0 1|1:35.1459:6:0:0:6,0:221,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:32.1356:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:59.2283:14:0:0:14,0:509,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:65.2489:16:0:0:16,0:587,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:35.1459:6:0:0:6,0:227,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:53.2077:12:0:0:12,0:454,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:44.1768:9:0:0:9,0:332,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:35.1459:7:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:71.2695:18:0:0:18,0:680,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:71.2695:18:0:0:18,0:635,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:50.1974:11:0:0:11,0:384,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:71.2695:18:0:0:18,0:672,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:92.3406:25:0:0:25,0:898,0:-10,-7.52575,0,-10,-7.52575,-10 1|1:56.218:13:0:0:13,0:490,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:50.1974:11:0:0:11,0:415,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:95.3499:26:0:0:26,0:930,0:-10,-7.82678,0,-10,-7.82678,-10 1|1:29.1253:4:0:0:4,0:148,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:59.2283:15:0:0:14,0:530,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:38.1562:7:0:0:7,0:259,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:41.1665:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:95.3499:26:0:0:26,0:971,0:-10,-7.82678,0,-10,-7.82678,-10 0|1:1.13792e-06:14:14:514:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 1|1:68.2592:17:0:0:17,0:620,0:-10,-5.11751,0,-10,-5.11751,-10 1|1:0.0194473:6:0:0:0,6:0,218:-10,-10,-10,-1.80618,-1.80618,0 1|1:38.1562:7:0:0:7,0:257,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:56.218:13:0:0:13,0:479,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:50.1974:11:0:0:11,0:403,0:-10,-3.31133,0,-10,-3.31133,-10 0|1:4.44499e-09:6:6:221:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 1|1:71.2695:19:0:0:18,0:654,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:41.1665:8:0:0:8,0:296,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:26.115:3:0:0:3,0:110,0:-10,-0.90309,0,-10,-0.90309,-10 1|1:80.3004:21:0:0:21,0:773,0:-10,-6.32163,0,-10,-6.32163,-10 1|1:65.2489:16:0:0:16,0:607,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:47.1871:10:0:0:10,0:354,0:-10,-3.0103,0,-10,-3.0103,-10 0|1:99:15:5:188:10,0:377,0:-10,0,-10,-10,-10,-10 1|1:38.1562:7:0:0:7,0:262,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:38.1562:7:0:0:7,0:264,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:65.2489:16:0:0:16,0:576,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:56.218:13:0:0:13,0:471,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:35.1459:6:0:0:6,0:226,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:74.2798:19:0:0:19,0:710,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:41.1665:8:0:0:8,0:299,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:32.1356:5:0:0:5,0:167,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:50.1974:11:0:0:11,0:416,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:23.1047:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 1|1:41.1665:8:0:0:8,0:295,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:86.3209:23:0:0:23,0:867,0:-10,-6.92369,0,-10,-6.92369,-10 1|1:68.2592:17:0:0:17,0:643,0:-10,-5.11751,0,-10,-5.11751,-10 1|1:47.1871:10:0:0:10,0:364,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:41.1665:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 0|1:82.8419:11:3:113:8,0:285,0:-10,0,-9.45282,-10,-10,-10 1|1:0.670055:11:0:0:0,11:0,375:-10,-10,-10,-3.31133,-3.31133,0 1|1:50.1974:11:0:0:11,0:380,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:53.2077:12:0:0:12,0:447,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:44.1768:9:0:0:9,0:336,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:68.2592:17:0:0:17,0:620,0:-10,-5.11751,0,-10,-5.11751,-10 1|1:41.1665:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:47.1871:10:0:0:10,0:380,0:-10,-3.0103,0,-10,-3.0103,-10 scaffold_222 1252247 . A G 32445.8 . AB=0.584906;ABP=9.64763;AC=9;AF=0.0494505;AN=182;AO=82;CIGAR=1X1M1X;DP=1138;DPB=1138.33;DPRA=1.26408;EPP=5.65844;EPPR=3.32051;GTI=5;LEN=1;MEANALT=1.88889;MQM=59.1829;MQMR=60;NS=91;NUMALT=2;ODDS=1.75415;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=18.5;PQR=0;PRO=0;QA=2821;QR=1036;RO=28;RPP=181.071;RPPR=63.8115;RUN=1;SAF=46;SAP=5.65844;SAR=36;SRF=13;SRP=3.32051;SRR=15;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:47.1871:10:0:0:10,0:347,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:38.1562:7:0:0:7,0:221,0:-10,-2.10721,0,-10,-2.10721,-10 0|1:99:12:0:0:5,6:181,192:-10,-10,-10,-10,0,-10 1|1:24.0602:19:0:0:0,19:0,654:-10,-10,-10,-5.71957,-5.71957,0 0|0:41.1665:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:56.218:13:0:0:13,0:491,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:80.3004:21:0:0:21,0:760,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:83.3107:22:0:0:22,0:808,0:-10,-6.62266,0,-10,-6.62266,-10 0|0:41.1665:8:0:0:8,0:264,0:-10,-2.40824,0,-10,-2.40824,-10 .:.:.:.:.:.:.:. 0|0:32.1356:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:23.1047:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 0|1:99:19:0:0:6,12:218,416:-10,-10,-10,-10,0,-10 0|0:89.3312:24:0:0:24,0:889,0:-10,-7.22472,0,-10,-7.22472,-10 0|0:77.2901:20:0:0:20,0:748,0:-10,-6.0206,0,-10,-6.0206,-10 0|0:65.2489:17:0:0:16,0:576,0:-10,-4.81648,0,-10,-4.81648,-10 0|1:99:30:0:0:18,12:641,436:-10,-10,-10,-10,0,-10 0|0:35.1459:6:0:0:6,0:206,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:56.218:13:0:0:13,0:475,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:80.3004:21:0:0:21,0:756,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:62.2386:15:0:0:15,0:542,0:-10,-4.51545,0,-10,-4.51545,-10 0|1:99:23:0:0:13,10:490,349:-10,-10,-10,-10,0,-10 0|0:29.1253:4:0:0:4,0:139,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:44.1768:9:0:0:9,0:338,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:59.2283:14:0:0:14,0:532,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:47.1871:11:0:0:10,0:322,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:37.2232:14:0:0:12,1:424,15:-10,-3.61236,0,-10,-1.44945,-10 0|0:38.1562:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:59.2283:14:0:0:14,0:505,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:95.3499:26:0:0:26,0:956,0:-10,-7.82678,0,-10,-7.82678,-10 0|0:47.1871:10:0:0:10,0:356,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:38.1562:7:0:0:7,0:199,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:53.2077:12:0:0:12,0:432,0:-10,-3.61236,0,-10,-3.61236,-10 0|1:0.00971278:5:0:0:0,5:0,166:-10,-10,-10,-1.50515,-1.50515,0 0|0:35.1459:6:0:0:6,0:221,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:32.1356:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:59.2283:14:0:0:14,0:509,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:65.2489:16:0:0:16,0:587,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:35.1459:6:0:0:6,0:227,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:53.2077:12:0:0:12,0:454,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:44.1768:9:0:0:9,0:332,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:35.1459:7:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:71.2695:18:0:0:18,0:680,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:71.2695:18:0:0:18,0:635,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:50.1974:11:0:0:11,0:384,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:71.2695:18:0:0:18,0:672,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:92.3406:25:0:0:25,0:898,0:-10,-7.52575,0,-10,-7.52575,-10 0|0:56.218:13:0:0:13,0:490,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:50.1974:11:0:0:11,0:415,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:95.3499:26:0:0:26,0:930,0:-10,-7.82678,0,-10,-7.82678,-10 0|0:29.1253:4:0:0:4,0:148,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:59.2283:15:0:0:14,0:530,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:38.1562:7:0:0:7,0:259,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:41.1665:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:95.3499:26:0:0:26,0:971,0:-10,-7.82678,0,-10,-7.82678,-10 0|0:1.13792e-06:14:14:514:0,0:0,0:0,-4.21442,-10,-4.21442,-10,-10 0|0:68.2592:17:0:0:17,0:620,0:-10,-5.11751,0,-10,-5.11751,-10 0|1:0.0194473:6:0:0:0,6:0,218:-10,-10,-10,-1.80618,-1.80618,0 0|0:38.1562:7:0:0:7,0:257,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:56.218:13:0:0:13,0:479,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:50.1974:11:0:0:11,0:403,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:4.44499e-09:6:6:221:0,0:0,0:0,-1.80618,-10,-1.80618,-10,-10 0|0:71.2695:19:0:0:18,0:654,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:41.1665:8:0:0:8,0:296,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:26.115:3:0:0:3,0:110,0:-10,-0.90309,0,-10,-0.90309,-10 0|0:80.3004:21:0:0:21,0:773,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:65.2489:16:0:0:16,0:607,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:47.1871:10:0:0:10,0:354,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:99:15:5:188:10,0:377,0:-10,0,-10,-10,-10,-10 0|0:38.1562:7:0:0:7,0:262,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:38.1562:7:0:0:7,0:264,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:65.2489:16:0:0:16,0:576,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:56.218:13:0:0:13,0:471,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:35.1459:6:0:0:6,0:226,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:74.2798:19:0:0:19,0:710,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:41.1665:8:0:0:8,0:299,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:32.1356:5:0:0:5,0:167,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:50.1974:11:0:0:11,0:416,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:23.1047:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 0|0:41.1665:8:0:0:8,0:295,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:86.3209:23:0:0:23,0:867,0:-10,-6.92369,0,-10,-6.92369,-10 0|0:68.2592:17:0:0:17,0:643,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:47.1871:10:0:0:10,0:364,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:41.1665:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:82.8419:11:3:113:8,0:285,0:-10,0,-9.45282,-10,-10,-10 0|1:0.670055:11:0:0:0,11:0,375:-10,-10,-10,-3.31133,-3.31133,0 0|0:50.1974:11:0:0:11,0:380,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:53.2077:12:0:0:12,0:447,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:44.1768:9:0:0:9,0:336,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:68.2592:17:0:0:17,0:620,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:41.1665:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:47.1871:10:0:0:10,0:380,0:-10,-3.0103,0,-10,-3.0103,-10 scaffold_226 17111 . A G 16853.2 . AB=0.507625;ABP=3.24211;AC=80;AF=0.43956;AN=182;AO=607;CIGAR=1X;DP=1381;DPB=1381;DPRA=1.22198;EPP=3.01388;EPPR=5.54181;GTI=1;LEN=1;MEANALT=1.02;MQM=59.8534;MQMR=59.943;NS=91;NUMALT=1;ODDS=0.0133072;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=21811;QR=27837;RO=772;RPP=1321.09;RPPR=1679.39;RUN=1;SAF=304;SAP=3.01388;SAR=303;SRF=401;SRP=5.54181;SRR=371;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:17.2912:5:5:190:0:0:0,-1.50515,-10 0/0:14.2809:4:4:128:0:0:0,-1.20412,-10 1/1:55.4577:19:0:0:19:651:-10,-5.71957,0 1/1:22.3444:8:0:0:8:274:-10,-2.40824,0 0/1:99:10:5:168:5:172:-10,0,-10 .:.:.:.:.:.:.:. 0/0:77.4971:25:25:913:0:0:0,-7.52575,-10 1/1:73.5195:25:0:0:25:852:-10,-7.52575,0 0/0:29.3324:9:9:340:0:0:0,-2.70927,-10 0/0:11.2706:3:3:109:0:0:0,-0.90309,-10 0/0:14.2809:4:4:148:0:0:0,-1.20412,-10 0/0:8.26029:2:2:76:0:0:0,-0.60206,-7.22 0/0:95.5589:31:31:1112:0:0:0,-9.33193,-10 0/1:99:29:17:644:12:449:-10,0,-10 0/0:53.4148:17:17:573:0:0:0,-5.11751,-10 0/1:99:15:6:226:9:336:-10,0,-10 0/0:41.3736:13:13:493:0:0:0,-3.91339,-10 1/1:37.3959:13:0:0:13:477:-10,-3.91339,0 1/1:49.4371:17:0:0:17:620:-10,-5.11751,0 0/1:99:29:17:639:12:454:-10,0,-10 1/1:37.3959:13:0:0:13:489:-10,-3.91339,0 0/1:99:17:8:292:9:342:-10,0,-10 1/1:19.3341:7:0:0:7:233:-10,-2.10721,0 0/0:44.3839:14:14:494:0:0:0,-4.21442,-10 1/1:40.4062:14:0:0:14:525:-10,-4.21442,0 0/1:99:25:14:498:11:392:-10,0,-10 1/1:34.3856:12:0:0:12:423:-10,-3.61236,0 0/0:47.3942:15:15:555:0:0:0,-4.51545,-10 0/0:50.4045:17:16:592:0:0:0,-4.81648,-10 0/1:99:22:12:408:9:312:-10,0,-10 0/0:8.26028:2:2:64:0:0:0,-0.60206,-6.08 1/1:19.3341:7:0:0:7:240:-10,-2.10721,0 1/1:61.4783:21:0:0:21:769:-10,-6.32163,0 0/0:20.3015:6:6:228:0:0:0,-1.80618,-10 0/0:23.3118:7:7:206:0:0:0,-2.10721,-10 1/1:37.3959:13:0:0:13:492:-10,-3.91339,0 1/1:28.365:10:0:0:10:351:-10,-3.0103,0 0/1:99:30:15:541:15:542:-10,0,-10 0/0:38.3633:12:12:447:0:0:0,-3.61236,-10 0/0:56.4251:18:18:641:0:0:0,-5.41854,-10 1/1:55.4577:19:0:0:19:702:-10,-5.71957,0 1/1:37.3959:13:0:0:13:473:-10,-3.91339,0 1/1:22.3444:8:0:0:8:280:-10,-2.40824,0 0/0:98.5619:32:32:1143:0:0:0,-9.63296,-10 1/1:31.3753:11:0:0:11:404:-10,-3.31133,0 0/1:99:11:7:255:4:128:-10,0,-10 0/1:99:45:26:935:19:675:-10,0,-10 0/1:99:10:3:114:7:239:-10,0,-9.70888 1/1:34.3856:12:0:0:12:375:-10,-3.61236,0 0/1:99:25:11:395:14:481:-10,0,-10 1/1:40.4062:14:0:0:14:514:-10,-4.21442,0 0/0:95.5589:31:31:1125:0:0:0,-9.33193,-10 1/1:31.3753:11:0:0:11:414:-10,-3.31133,0 0/1:0.257189:1:1:29:0:0:0,-0.30103,-2.9 0/0:92.5486:30:30:1066:0:0:0,-9.0309,-10 0/0:68.4663:22:22:803:0:0:0,-6.62266,-10 0/1:99:17:7:266:10:380:-10,0,-10 1/1:16.3238:6:0:0:6:223:-10,-1.80618,0 0/0:38.3633:12:12:438:0:0:0,-3.61236,-10 0/0:20.3015:6:6:221:0:0:0,-1.80618,-10 0/1:99:17:6:218:11:394:-10,0,-10 0/0:47.3942:15:15:545:0:0:0,-4.51545,-10 1/1:46.159:25:1:16:24:844:-10,-4.52781,0 0/1:99:15:8:291:7:265:-10,0,-10 1/1:16.3238:6:0:0:6:227:-10,-1.80618,0 0/1:99:16:5:180:11:413:-10,0,-10 1/1:61.4783:21:0:0:21:746:-10,-6.32163,0 1/1:40.4062:14:0:0:14:453:-10,-4.21442,0 0/1:99:30:14:506:16:563:-10,0,-10 1/1:40.4062:14:0:0:14:527:-10,-4.21442,0 0/0:50.4045:16:16:566:0:0:0,-4.81648,-10 0/0:71.4766:23:23:833:0:0:0,-6.92369,-10 0/0:56.4251:18:18:643:0:0:0,-5.41854,-10 0/0:17.2912:5:5:186:0:0:0,-1.50515,-10 0/0:86.5281:28:28:1053:0:0:0,-8.42884,-10 1/1:37.3959:13:0:0:13:473:-10,-3.91339,0 0/0:47.3942:15:15:523:0:0:0,-4.51545,-10 0/0:23.3118:7:7:266:0:0:0,-2.10721,-10 1/1:13.3135:5:0:0:5:177:-10,-1.50515,0 0/0:26.3221:8:8:304:0:0:0,-2.40824,-10 0/1:99:33:14:451:19:686:-10,0,-10 0/1:99:23:10:352:13:462:-10,0,-10 0/0:47.3942:15:15:544:0:0:0,-4.51545,-10 0/1:99:16:11:388:5:182:-10,0,-10 0/1:99:24:9:316:15:564:-10,0,-10 0/0:20.3015:6:6:221:0:0:0,-1.80618,-10 0/0:41.3736:13:13:474:0:0:0,-3.91339,-10 1/1:10.3032:4:0:0:4:152:-10,-1.20412,0 0/0:14.2809:4:4:150:0:0:0,-1.20412,-10 0/0:35.353:11:11:400:0:0:0,-3.31133,-10 0/0:47.3942:15:15:543:0:0:0,-4.51545,-10 0/0:32.3427:10:10:353:0:0:0,-3.0103,-10 scaffold_226 43565 . G A 1139.8 . AB=0.511364;ABP=3.109;AC=4;AF=0.0217391;AN=184;AO=45;CIGAR=1X;DP=1814;DPB=1814;DPRA=1.12167;EPP=4.21667;EPPR=4.514;GTI=0;LEN=1;MEANALT=1;MQM=51.8889;MQMR=59.4505;NS=92;NUMALT=1;ODDS=6.43234;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1610;QR=64342;RO=1769;RPP=100.727;RPPR=3835.66;RUN=1;SAF=20;SAP=4.21667;SAR=25;SRF=903;SRP=4.69077;SRR=866;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:85.1529:22:22:802:0:0:0,-6.62266,-10 0/0:36.9883:6:6:228:0:0:0,-1.80618,-10 0/0:52.0398:11:11:396:0:0:0,-3.31133,-10 0/0:82.1427:21:21:747:0:0:0,-6.32163,-10 0/0:67.0913:16:16:602:0:0:0,-4.81648,-10 0/0:46.0192:9:9:328:0:0:0,-2.70927,-10 0/0:99:38:38:1363:0:0:0,-10,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 0/0:52.0398:11:11:415:0:0:0,-3.31133,-10 0/0:33.978:5:5:188:0:0:0,-1.50515,-10 0/0:36.9883:6:6:169:0:0:0,-1.80618,-10 0/0:36.9883:6:6:228:0:0:0,-1.80618,-10 0/0:99:27:27:977:0:0:0,-8.12781,-10 0/0:99:44:44:1601:0:0:0,-10,-10 0/0:64.081:15:15:566:0:0:0,-4.51545,-10 0/0:79.1325:20:20:744:0:0:0,-6.0206,-10 0/0:79.1325:20:20:731:0:0:0,-6.0206,-10 0/0:67.0913:16:16:582:0:0:0,-4.81648,-10 0/0:94.1819:25:25:906:0:0:0,-7.52575,-10 0/0:99:41:41:1455:0:0:0,-10,-10 0/0:82.1427:21:21:758:0:0:0,-6.32163,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:39.9986:7:7:259:0:0:0,-2.10721,-10 0/1:99:13:4:140:9:325:-10,0,-10 0/0:99:31:31:1089:0:0:0,-9.33193,-10 0/1:99:26:16:567:10:370:-10,0,-10 0/0:73.1119:18:18:640:0:0:0,-5.41854,-10 0/0:67.0913:16:16:598:0:0:0,-4.81648,-10 0/0:73.1119:18:18:621:0:0:0,-5.41854,-10 0/0:99:41:41:1529:0:0:0,-10,-10 0/0:58.0604:13:13:426:0:0:0,-3.91339,-10 0/0:49.0295:10:10:370:0:0:0,-3.0103,-10 0/0:79.1325:20:20:734:0:0:0,-6.0206,-10 0/0:64.081:15:15:558:0:0:0,-4.51545,-10 0/0:67.0913:16:16:589:0:0:0,-4.81648,-10 0/0:46.0192:9:9:320:0:0:0,-2.70927,-10 0/0:30.9677:4:4:142:0:0:0,-1.20412,-10 0/0:99:28:28:1060:0:0:0,-8.42884,-10 0/0:82.1427:21:21:771:0:0:0,-6.32163,-10 0/0:82.1427:21:21:783:0:0:0,-6.32163,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:88.1629:23:23:812:0:0:0,-6.92369,-10 0/0:73.1119:18:18:654:0:0:0,-5.41854,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:52.0398:11:11:389:0:0:0,-3.31133,-10 0/0:99:49:49:1834:0:0:0,-10,-10 0/0:58.0604:13:13:456:0:0:0,-3.91339,-10 0/0:52.0398:11:11:379:0:0:0,-3.31133,-10 0/0:99:34:34:1182:0:0:0,-10,-10 0/0:49.0295:10:10:361:0:0:0,-3.0103,-10 0/1:99:36:19:673:17:638:-10,0,-10 0/0:82.1427:21:21:774:0:0:0,-6.32163,-10 0/0:52.0398:11:11:415:0:0:0,-3.31133,-10 0/0:99:43:43:1559:0:0:0,-10,-10 0/0:46.0192:9:9:337:0:0:0,-2.70927,-10 0/1:99:13:4:144:9:277:-10,0,-10 0/0:43.0089:8:8:291:0:0:0,-2.40824,-10 0/0:67.0913:16:16:575:0:0:0,-4.81648,-10 0/0:61.0707:14:14:503:0:0:0,-4.21442,-10 0/0:70.1016:17:17:631:0:0:0,-5.11751,-10 0/0:79.1325:20:20:735:0:0:0,-6.0206,-10 0/0:99:38:38:1379:0:0:0,-10,-10 0/0:55.0501:12:12:427:0:0:0,-3.61236,-10 0/0:43.0089:8:8:299:0:0:0,-2.40824,-10 0/0:79.1325:20:20:740:0:0:0,-6.0206,-10 0/0:82.1427:21:21:749:0:0:0,-6.32163,-10 0/0:73.1119:18:18:637:0:0:0,-5.41854,-10 0/0:99:49:49:1750:0:0:0,-10,-10 0/0:46.0192:9:9:338:0:0:0,-2.70927,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:97.19:26:26:963:0:0:0,-7.82678,-10 0/0:64.081:15:15:524:0:0:0,-4.51545,-10 0/0:99:38:38:1406:0:0:0,-10,-10 0/0:43.0089:8:8:303:0:0:0,-2.40824,-10 0/0:76.1222:19:19:712:0:0:0,-5.71957,-10 0/0:58.0604:13:13:490:0:0:0,-3.91339,-10 0/0:30.9677:4:4:151:0:0:0,-1.20412,-10 0/0:58.0604:13:13:484:0:0:0,-3.91339,-10 0/0:99:36:36:1273:0:0:0,-10,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:76.1222:19:19:676:0:0:0,-5.71957,-10 0/0:85.1529:22:22:799:0:0:0,-6.62266,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:27.9574:3:3:114:0:0:0,-0.90309,-10 0/0:58.0604:13:13:482:0:0:0,-3.91339,-10 0/0:55.0501:12:12:451:0:0:0,-3.61236,-10 0/0:33.978:5:5:179:0:0:0,-1.50515,-10 0/0:55.0501:12:12:445:0:0:0,-3.61236,-10 0/0:70.1016:17:17:621:0:0:0,-5.11751,-10 0/0:43.0089:8:8:304:0:0:0,-2.40824,-10 scaffold_226 69112 . T C 472.082 . AB=0.416667;ABP=5.9056;AC=3;AF=0.0163043;AN=184;AO=20;CIGAR=1X;DP=2078;DPB=2078;DPRA=0.701478;EPP=4.74748;EPPR=3.67008;GTI=1;LEN=1;MEANALT=1;MQM=57.3;MQMR=57.2572;NS=92;NUMALT=1;ODDS=13.9292;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=727;QR=75118;RO=2057;RPP=24.2907;RPPR=2299.71;RUN=1;SAF=9;SAP=3.44459;SAR=11;SRF=983;SRP=11.7521;SRR=1074;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:93.6066:16:16:558:0:0:0,-4.81648,-10 0/0:99:23:23:828:0:0:0,-6.92369,-10 0/0:99:22:22:835:0:0:0,-6.62266,-10 0/0:87.5859:14:14:526:0:0:0,-4.21442,-10 0/0:99:31:31:1076:0:0:0,-9.33193,-10 0/0:99:24:24:879:0:0:0,-7.22472,-10 0/1:99:22:14:525:8:295:-10,0,-10 0/0:99:32:32:1132:0:0:0,-9.63296,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:63.5039:6:6:217:0:0:0,-1.80618,-10 0/0:78.5554:11:11:382:0:0:0,-3.31133,-10 0/0:72.5348:9:9:340:0:0:0,-2.70927,-10 0/0:99:45:45:1682:0:0:0,-10,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:99:45:45:1645:0:0:0,-10,-10 0/0:99:45:45:1658:0:0:0,-10,-10 0/1:99:23:14:502:9:318:-10,0,-10 0/0:93.6066:16:16:601:0:0:0,-4.81648,-10 0/0:99:24:24:902:0:0:0,-7.22472,-10 0/0:99:28:28:1033:0:0:0,-8.42884,-10 0/0:99:18:18:682:0:0:0,-5.41854,-10 0/0:99:38:38:1419:0:0:0,-10,-10 0/0:96.6165:17:17:634:0:0:0,-5.11751,-10 0/0:99:23:23:827:0:0:0,-6.92369,-10 0/0:84.576:13:13:471:0:0:0,-3.91339,-10 0/0:99:25:25:859:0:0:0,-7.52575,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:60.4936:5:5:188:0:0:0,-1.50515,-10 0/0:99:22:22:834:0:0:0,-6.62266,-10 0/0:99:37:37:1344:0:0:0,-10,-10 0/0:72.5348:9:9:315:0:0:0,-2.70927,-10 0/0:72.5348:9:9:338:0:0:0,-2.70927,-10 0/0:78.5554:11:11:388:0:0:0,-3.31133,-10 0/0:84.576:13:13:444:0:0:0,-3.91339,-10 0/0:99:23:23:842:0:0:0,-6.92369,-10 0/0:87.5859:14:14:522:0:0:0,-4.21442,-10 0/0:81.5657:12:12:440:0:0:0,-3.61236,-10 0/0:99:49:49:1802:0:0:0,-10,-10 0/0:99:18:18:677:0:0:0,-5.41854,-10 0/0:99:21:21:774:0:0:0,-6.32163,-10 0/0:99:41:41:1508:0:0:0,-10,-10 0/0:99:21:21:757:0:0:0,-6.32163,-10 0/0:99:21:21:745:0:0:0,-6.32163,-10 0/0:99:29:29:1095:0:0:0,-8.72987,-10 0/0:96.6165:17:17:645:0:0:0,-5.11751,-10 0/0:99:28:28:1003:0:0:0,-8.42884,-10 0/0:99:44:44:1589:0:0:0,-10,-10 0/0:99:18:18:679:0:0:0,-5.41854,-10 0/0:99:21:21:780:0:0:0,-6.32163,-10 0/0:99:32:32:1136:0:0:0,-9.63296,-10 0/0:90.5959:15:15:560:0:0:0,-4.51545,-10 0/0:99:32:32:1182:0:0:0,-9.63296,-10 0/0:99:20:20:740:0:0:0,-6.0206,-10 0/0:81.5657:12:12:430:0:0:0,-3.61236,-10 0/0:99:42:42:1504:0:0:0,-10,-10 0/0:84.576:13:13:482:0:0:0,-3.91339,-10 0/0:99:22:22:791:0:0:0,-6.62266,-10 0/1:3.67638e-08:3:0:0:3:114:-10,-0.90309,0 0/0:99:20:20:736:0:0:0,-6.0206,-10 0/0:99:20:20:756:0:0:0,-6.0206,-10 0/0:99:28:27:1013:0:0:0,-8.12781,-10 0/0:93.6066:16:16:558:0:0:0,-4.81648,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:90.5959:15:15:523:0:0:0,-4.51545,-10 0/0:69.5245:8:8:279:0:0:0,-2.40824,-10 0/0:99:48:48:1785:0:0:0,-10,-10 0/0:99:30:30:1038:0:0:0,-9.0309,-10 0/0:84.576:13:13:457:0:0:0,-3.91339,-10 0/0:99:37:37:1379:0:0:0,-10,-10 0/0:84.576:13:13:488:0:0:0,-3.91339,-10 0/0:99:28:28:1016:0:0:0,-8.42884,-10 0/0:99:21:21:796:0:0:0,-6.32163,-10 0/0:99:23:23:822:0:0:0,-6.92369,-10 0/0:99:18:18:651:0:0:0,-5.41854,-10 0/0:99:30:30:1127:0:0:0,-9.0309,-10 0/0:84.576:13:13:459:0:0:0,-3.91339,-10 0/0:99:23:23:841:0:0:0,-6.92369,-10 0/0:87.5859:14:14:509:0:0:0,-4.21442,-10 0/0:81.5657:12:12:429:0:0:0,-3.61236,-10 0/0:75.5451:10:10:379:0:0:0,-3.0103,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:99:35:35:1254:0:0:0,-10,-10 0/0:90.5959:15:15:537:0:0:0,-4.51545,-10 0/0:99:24:24:869:0:0:0,-7.22472,-10 0/0:78.5554:11:11:393:0:0:0,-3.31133,-10 0/0:93.6066:16:16:568:0:0:0,-4.81648,-10 0/0:99:18:18:663:0:0:0,-5.41854,-10 0/0:78.5554:11:11:411:0:0:0,-3.31133,-10 0/0:99:37:37:1344:0:0:0,-10,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:90.5959:15:15:490:0:0:0,-4.51545,-10 scaffold_226 83471 . C T 666.604 . AB=0.428571;ABP=5.80219;AC=4;AF=0.0217391;AN=184;AO=28;CIGAR=1X;DP=998;DPB=998;DPRA=1.55764;EPP=3.0103;EPPR=3.19219;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9866;NS=92;NUMALT=1;ODDS=4.59466;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1023;QR=35398;RO=967;RPP=63.8115;RPPR=1991.43;RUN=1;SAF=14;SAP=3.0103;SAR=14;SRF=501;SRP=5.76113;SRR=466;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.2888:14:14:523:0:0:0,-4.21442,-10 0/0:35.2064:6:6:218:0:0:0,-1.80618,-10 0/1:99:16:10:308:6:221:-10,0,-10 0/0:38.2167:7:7:265:0:0:0,-2.10721,-10 0/0:47.2476:10:10:362:0:0:0,-3.0103,-10 0/0:32.1961:5:5:185:0:0:0,-1.50515,-10 0/0:48.7149:19:18:647:1:16:0,-2.84082,-10 0/1:99:21:12:402:9:342:-10,0,-10 0/0:32.1961:5:5:183:0:0:0,-1.50515,-10 0/0:20.1549:1:1:38:0:0:0,-0.30103,-3.8 0/0:23.1652:2:2:75:0:0:0,-0.60206,-7.125 0/0:44.2373:9:9:327:0:0:0,-2.70927,-10 0/0:86.3815:23:23:858:0:0:0,-6.92369,-10 0/0:59.2888:14:14:526:0:0:0,-4.21442,-10 0/0:83.3712:22:22:821:0:0:0,-6.62266,-10 0/0:74.3403:19:19:701:0:0:0,-5.71957,-10 0/0:56.2785:13:13:490:0:0:0,-3.91339,-10 0/0:44.2373:9:9:342:0:0:0,-2.70927,-10 0/0:47.2476:10:10:351:0:0:0,-3.0103,-10 0/0:71.33:18:18:682:0:0:0,-5.41854,-10 0/1:99:11:6:202:5:180:-10,0,-10 0/1:99:15:8:304:7:264:-10,0,-10 0/0:38.2167:7:7:266:0:0:0,-2.10721,-10 0/0:53.2682:12:12:437:0:0:0,-3.61236,-10 0/0:44.2373:9:9:327:0:0:0,-2.70927,-10 0/0:44.2373:9:9:328:0:0:0,-2.70927,-10 0/0:47.2476:10:10:365:0:0:0,-3.0103,-10 0/0:32.1961:5:5:183:0:0:0,-1.50515,-10 0/0:41.227:8:8:300:0:0:0,-2.40824,-10 0/0:59.2888:14:14:527:0:0:0,-4.21442,-10 0/0:26.1755:3:3:114:0:0:0,-0.90309,-10 0/0:38.2167:7:7:263:0:0:0,-2.10721,-10 0/0:53.2682:12:12:454:0:0:0,-3.61236,-10 0/0:29.1858:4:4:128:0:0:0,-1.20412,-10 0/0:44.2373:9:9:318:0:0:0,-2.70927,-10 0/0:26.1755:3:3:114:0:0:0,-0.90309,-10 0/0:41.227:8:8:258:0:0:0,-2.40824,-10 0/0:56.2785:13:13:469:0:0:0,-3.91339,-10 0/0:44.2373:9:9:342:0:0:0,-2.70927,-10 0/0:56.2785:13:13:490:0:0:0,-3.91339,-10 0/0:47.2476:10:10:350:0:0:0,-3.0103,-10 0/0:47.2476:10:10:380:0:0:0,-3.0103,-10 0/0:71.33:18:18:661:0:0:0,-5.41854,-10 0/0:47.2476:10:10:368:0:0:0,-3.0103,-10 0/0:44.2373:9:9:341:0:0:0,-2.70927,-10 0/0:29.1858:4:4:149:0:0:0,-1.20412,-10 0/0:99:31:31:1126:0:0:0,-9.33193,-10 0/0:74.3403:19:19:698:0:0:0,-5.71957,-10 0/0:35.2064:6:6:202:0:0:0,-1.80618,-10 0/0:99:29:29:1037:0:0:0,-8.72987,-10 0/0:29.1858:4:4:126:0:0:0,-1.20412,-10 0/0:68.3197:18:17:632:0:0:0,-5.11751,-10 0/0:35.2064:6:6:228:0:0:0,-1.80618,-10 0/0:32.1961:5:5:189:0:0:0,-1.50515,-10 0/0:62.2991:15:15:541:0:0:0,-4.51545,-10 0/0:26.1755:3:3:114:0:0:0,-0.90309,-10 0/0:44.2373:9:9:308:0:0:0,-2.70927,-10 0/0:35.2064:6:6:200:0:0:0,-1.80618,-10 0/0:29.1858:4:4:148:0:0:0,-1.20412,-10 0/0:38.2167:7:7:254:0:0:0,-2.10721,-10 0/0:86.3815:23:23:848:0:0:0,-6.92369,-10 0/0:47.2476:10:10:380:0:0:0,-3.0103,-10 0/0:83.3712:22:22:755:0:0:0,-6.62266,-10 0/0:44.2373:9:9:342:0:0:0,-2.70927,-10 0/0:29.1858:5:4:152:0:0:0,-1.20412,-10 0/0:83.3712:22:22:806:0:0:0,-6.62266,-10 0/0:53.2682:12:12:425:0:0:0,-3.61236,-10 0/0:47.2476:10:10:376:0:0:0,-3.0103,-10 0/0:74.3403:19:19:683:0:0:0,-5.71957,-10 0/0:44.2373:9:9:319:0:0:0,-2.70927,-10 0/0:44.2373:9:9:342:0:0:0,-2.70927,-10 0/0:59.2888:14:14:531:0:0:0,-4.21442,-10 0/0:47.2476:10:10:376:0:0:0,-3.0103,-10 0/0:44.2373:9:9:342:0:0:0,-2.70927,-10 0/0:62.2991:15:15:548:0:0:0,-4.51545,-10 0/0:38.2167:7:7:244:0:0:0,-2.10721,-10 0/0:29.1858:4:4:152:0:0:0,-1.20412,-10 0/0:53.2682:12:12:425:0:0:0,-3.61236,-10 0/0:23.1652:2:2:76:0:0:0,-0.60206,-7.22 0/0:41.227:8:8:295:0:0:0,-2.40824,-10 0/0:80.3609:21:21:798:0:0:0,-6.32163,-10 0/0:50.2579:11:11:378:0:0:0,-3.31133,-10 0/0:53.2682:12:12:455:0:0:0,-3.61236,-10 0/0:56.2785:13:13:488:0:0:0,-3.91339,-10 0/0:59.2888:14:14:508:0:0:0,-4.21442,-10 0/0:23.1652:2:2:76:0:0:0,-0.60206,-7.22 0/0:38.2167:7:7:266:0:0:0,-2.10721,-10 0/0:38.2167:7:7:266:0:0:0,-2.10721,-10 0/0:35.2064:6:6:227:0:0:0,-1.80618,-10 0/0:44.2373:9:9:339:0:0:0,-2.70927,-10 0/0:53.2682:13:12:445:0:0:0,-3.61236,-10 0/0:32.1961:5:5:190:0:0:0,-1.50515,-10 scaffold_226 265828 . C T 883.669 . AB=0.610169;ABP=9.23028;AC=4;AF=0.0222222;AN=180;AO=37;CIGAR=1X;DP=1112;DPB=1112;DPRA=1.22951;EPP=3.06899;EPPR=3.17392;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9572;NS=90;NUMALT=1;ODDS=4.51745;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1330;QR=38951;RO=1075;RPP=74.9036;RPPR=2337.34;RUN=1;SAF=17;SAP=3.5385;SAR=20;SRF=533;SRP=3.17392;SRR=542;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.8451:10:10:373:0:0:0,-3.0103,-10 0/0:40.8245:8:8:276:0:0:0,-2.40824,-10 0/0:40.8245:8:8:280:0:0:0,-2.40824,-10 0/0:52.8657:12:12:433:0:0:0,-3.61236,-10 0/0:34.8039:6:6:226:0:0:0,-1.80618,-10 0/0:40.8245:8:8:302:0:0:0,-2.40824,-10 0/0:88.9891:24:24:889:0:0:0,-7.22472,-10 0/0:67.9172:17:17:612:0:0:0,-5.11751,-10 0/0:43.8348:9:9:342:0:0:0,-2.70927,-10 0/0:31.7936:5:5:188:0:0:0,-1.50515,-10 0/0:25.773:3:3:113:0:0:0,-0.90309,-10 0/0:40.8245:8:8:302:0:0:0,-2.40824,-10 0/0:41.0548:16:15:554:1:15:0,-2.11236,-10 0/0:79.9584:21:21:759:0:0:0,-6.32163,-10 0/0:64.9069:16:16:579:0:0:0,-4.81648,-10 0/0:67.9172:17:17:595:0:0:0,-5.11751,-10 0/0:91.9992:25:25:927:0:0:0,-7.52575,-10 0/0:31.7936:5:5:189:0:0:0,-1.50515,-10 0/0:55.876:13:13:446:0:0:0,-3.91339,-10 0/0:99:30:30:1100:0:0:0,-9.0309,-10 0/0:61.8966:15:15:541:0:0:0,-4.51545,-10 0/0:55.876:13:13:494:0:0:0,-3.91339,-10 0/0:31.7936:5:5:185:0:0:0,-1.50515,-10 0/0:55.876:13:13:489:0:0:0,-3.91339,-10 0/0:49.8554:11:11:391:0:0:0,-3.31133,-10 0/0:37.8142:7:7:257:0:0:0,-2.10721,-10 0/0:46.8451:10:10:339:0:0:0,-3.0103,-10 0/0:28.7833:4:4:129:0:0:0,-1.20412,-10 0/0:61.8966:15:15:556:0:0:0,-4.51545,-10 0/0:82.9687:22:22:789:0:0:0,-6.62266,-10 0/0:34.8039:6:6:225:0:0:0,-1.80618,-10 0/0:31.7936:5:5:179:0:0:0,-1.50515,-10 0/0:37.8142:7:7:261:0:0:0,-2.10721,-10 0/0:37.8142:7:7:257:0:0:0,-2.10721,-10 0/0:67.9172:17:17:623:0:0:0,-5.11751,-10 0/0:40.8245:8:8:282:0:0:0,-2.40824,-10 0/0:31.7936:5:5:185:0:0:0,-1.50515,-10 0/0:61.8966:15:15:499:0:0:0,-4.51545,-10 0/0:46.8451:10:10:371:0:0:0,-3.0103,-10 0/0:52.8657:12:12:427:0:0:0,-3.61236,-10 0/0:49.8554:11:11:414:0:0:0,-3.31133,-10 0/0:49.8554:11:11:380:0:0:0,-3.31133,-10 0/0:31.7936:5:5:189:0:0:0,-1.50515,-10 0/0:67.9172:17:17:641:0:0:0,-5.11751,-10 0/0:70.9275:18:18:674:0:0:0,-5.41854,-10 0/0:52.8657:12:12:424:0:0:0,-3.61236,-10 0/0:88.9891:24:24:854:0:0:0,-7.22472,-10 0/0:73.9378:19:19:691:0:0:0,-5.71957,-10 0/0:49.8554:11:11:412:0:0:0,-3.31133,-10 0/0:67.9172:17:17:585:0:0:0,-5.11751,-10 0/0:55.876:13:13:486:0:0:0,-3.91339,-10 0/0:91.9992:25:25:908:0:0:0,-7.52575,-10 0/0:52.8657:12:12:432:0:0:0,-3.61236,-10 0/0:19.7524:1:1:36:0:0:0,-0.30103,-3.6 0/0:82.9687:22:22:777:0:0:0,-6.62266,-10 0/0:52.8657:12:12:455:0:0:0,-3.61236,-10 0/0:55.876:13:13:444:0:0:0,-3.91339,-10 0/0:58.8863:14:14:475:0:0:0,-4.21442,-10 0/0:40.8245:8:8:283:0:0:0,-2.40824,-10 0/0:25.773:3:3:114:0:0:0,-0.90309,-10 0/0:70.9275:18:18:648:0:0:0,-5.41854,-10 0/0:64.9069:16:16:601:0:0:0,-4.81648,-10 0/0:67.9172:17:17:629:0:0:0,-5.11751,-10 0/0:49.8554:11:11:416:0:0:0,-3.31133,-10 0/0:34.8039:6:6:224:0:0:0,-1.80618,-10 0/0:85.9789:23:23:833:0:0:0,-6.92369,-10 0/0:61.8966:15:15:548:0:0:0,-4.51545,-10 0/0:52.8657:12:12:430:0:0:0,-3.61236,-10 0/1:99:23:15:567:8:273:-10,0,-10 0/1:69.4498:11:1:38:10:369:-10,0,-1.53006 0/0:49.8554:11:11:390:0:0:0,-3.31133,-10 0/0:76.9481:20:20:705:0:0:0,-6.0206,-10 0/0:46.8451:10:10:327:0:0:0,-3.0103,-10 0/0:40.8245:8:8:280:0:0:0,-2.40824,-10 0/0:70.9275:18:18:655:0:0:0,-5.41854,-10 0/1:0.0175151:11:0:0:11:410:-10,-3.31133,0 0/0:40.8245:8:8:302:0:0:0,-2.40824,-10 .:.:.:.:.:.:.:. 0/0:28.7833:4:4:128:0:0:0,-1.20412,-10 0/0:31.7936:5:5:190:0:0:0,-1.50515,-10 0/0:52.8657:12:12:420:0:0:0,-3.61236,-10 0/0:70.9275:18:18:661:0:0:0,-5.41854,-10 0/0:49.8554:11:11:409:0:0:0,-3.31133,-10 0/0:58.8863:14:14:499:0:0:0,-4.21442,-10 0/1:99:14:7:255:7:263:-10,0,-10 0/0:37.8142:7:7:259:0:0:0,-2.10721,-10 0/0:52.8657:12:12:418:0:0:0,-3.61236,-10 0/0:34.8039:6:6:212:0:0:0,-1.80618,-10 0/0:40.8245:8:8:294:0:0:0,-2.40824,-10 0/0:55.876:13:13:491:0:0:0,-3.91339,-10 0/0:58.8863:14:14:484:0:0:0,-4.21442,-10 .:.:.:.:.:.:.:. scaffold_226 417751 . G A 533.261 . AB=0.552632;ABP=3.9246;AC=2;AF=0.0108696;AN=184;AO=22;CIGAR=1X;DP=1299;DPB=1299;DPRA=1.2371;EPP=3.40511;EPPR=6.15936;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9686;NS=92;NUMALT=1;ODDS=5.11693;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=802;QR=46700;RO=1275;RPP=50.7827;RPPR=2600.64;RUN=1;SAF=12;SAP=3.40511;SAR=10;SRF=639;SRP=3.02563;SRR=636;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:49.4372:11:11:409:0:0:0,-3.31133,-10 0/0:55.4578:13:13:462:0:0:0,-3.91339,-10 0/0:55.4578:13:13:482:0:0:0,-3.91339,-10 0/0:40.4063:8:8:294:0:0:0,-2.40824,-10 0/0:61.4784:15:15:564:0:0:0,-4.51545,-10 0/0:34.3857:6:6:227:0:0:0,-1.80618,-10 0/1:99:25:12:455:13:484:-10,0,-10 0/0:58.4681:14:14:509:0:0:0,-4.21442,-10 0/0:58.4681:14:14:523:0:0:0,-4.21442,-10 0/0:28.3651:4:4:152:0:0:0,-1.20412,-10 0/0:37.396:7:7:259:0:0:0,-2.10721,-10 0/0:31.3754:5:5:185:0:0:0,-1.50515,-10 0/0:97.6024:27:27:967:0:0:0,-8.12781,-10 0/0:88.5708:24:24:860:0:0:0,-7.22472,-10 0/0:99:37:37:1361:0:0:0,-10,-10 0/0:61.4784:15:15:553:0:0:0,-4.51545,-10 0/1:99:13:5:171:8:302:-10,0,-10 0/0:40.4063:8:8:302:0:0:0,-2.40824,-10 0/0:58.4681:14:14:517:0:0:0,-4.21442,-10 0/0:99:35:35:1244:0:0:0,-10,-10 0/0:58.4681:14:14:519:0:0:0,-4.21442,-10 0/0:88.5708:24:24:841:0:0:0,-7.22472,-10 0/0:34.3857:6:6:228:0:0:0,-1.80618,-10 0/0:61.4784:15:15:560:0:0:0,-4.51545,-10 0/0:67.499:17:17:609:0:0:0,-5.11751,-10 0/0:79.5401:22:21:778:0:0:0,-6.32163,-10 0/0:49.4372:11:11:387:0:0:0,-3.31133,-10 0/0:31.3754:5:5:190:0:0:0,-1.50515,-10 0/0:58.4681:14:14:486:0:0:0,-4.21442,-10 0/0:76.5298:21:20:723:0:0:0,-6.0206,-10 0/0:34.3857:6:6:227:0:0:0,-1.80618,-10 0/0:64.4887:16:16:607:0:0:0,-4.81648,-10 0/0:61.4784:15:15:523:0:0:0,-4.51545,-10 0/0:25.3548:3:3:114:0:0:0,-0.90309,-10 0/0:52.4475:12:12:425:0:0:0,-3.61236,-10 0/0:28.3651:4:4:152:0:0:0,-1.20412,-10 0/0:31.3754:5:5:184:0:0:0,-1.50515,-10 0/0:76.5298:20:20:750:0:0:0,-6.0206,-10 0/0:40.4063:8:8:273:0:0:0,-2.40824,-10 0/0:58.4681:14:14:531:0:0:0,-4.21442,-10 0/0:76.5298:20:20:757:0:0:0,-6.0206,-10 0/0:49.4372:11:11:379:0:0:0,-3.31133,-10 0/0:43.4166:9:9:336:0:0:0,-2.70927,-10 0/0:79.5401:21:21:756:0:0:0,-6.32163,-10 0/0:73.5196:19:19:715:0:0:0,-5.71957,-10 0/0:67.499:17:17:631:0:0:0,-5.11751,-10 0/0:94.5919:26:26:974:0:0:0,-7.82678,-10 0/0:82.5505:22:22:824:0:0:0,-6.62266,-10 0/0:28.3651:4:4:152:0:0:0,-1.20412,-10 0/0:85.5606:23:23:857:0:0:0,-6.92369,-10 0/0:43.4166:9:9:318:0:0:0,-2.70927,-10 0/0:91.5808:25:25:855:0:0:0,-7.52575,-10 0/0:31.3754:5:5:183:0:0:0,-1.50515,-10 0/0:22.3445:2:2:76:0:0:0,-0.60206,-7.22 0/0:91.5808:25:25:920:0:0:0,-7.52575,-10 0/0:46.4269:10:10:350:0:0:0,-3.0103,-10 0/0:70.5093:18:18:676:0:0:0,-5.41854,-10 0/0:46.4269:10:10:378:0:0:0,-3.0103,-10 0/0:67.499:17:17:630:0:0:0,-5.11751,-10 0/0:49.4372:11:11:403:0:0:0,-3.31133,-10 0/0:88.5708:24:24:821:0:0:0,-7.22472,-10 0/0:49.4372:11:11:405:0:0:0,-3.31133,-10 0/0:79.5401:21:21:767:0:0:0,-6.32163,-10 0/0:67.499:17:17:646:0:0:0,-5.11751,-10 0/0:34.3857:6:6:228:0:0:0,-1.80618,-10 0/0:85.5606:23:23:828:0:0:0,-6.92369,-10 0/0:61.4784:15:15:565:0:0:0,-4.51545,-10 0/0:49.4372:11:11:418:0:0:0,-3.31133,-10 0/0:85.5606:23:23:865:0:0:0,-6.92369,-10 0/0:28.3651:4:4:152:0:0:0,-1.20412,-10 0/0:55.4578:13:13:489:0:0:0,-3.91339,-10 0/0:94.5919:26:26:941:0:0:0,-7.82678,-10 0/0:61.4784:15:15:531:0:0:0,-4.51545,-10 0/0:37.396:7:7:254:0:0:0,-2.10721,-10 0/0:82.5505:22:22:817:0:0:0,-6.62266,-10 0/0:49.4372:11:11:394:0:0:0,-3.31133,-10 0/0:46.4269:10:10:377:0:0:0,-3.0103,-10 0/0:34.3857:6:6:227:0:0:0,-1.80618,-10 0/0:22.3445:2:2:76:0:0:0,-0.60206,-7.22 0/0:46.4269:10:10:377:0:0:0,-3.0103,-10 0/0:73.5196:19:19:688:0:0:0,-5.71957,-10 0/0:79.5401:21:21:781:0:0:0,-6.32163,-10 0/0:33.361:14:13:468:1:16:0,-1.46829,-10 0/0:49.4372:11:11:392:0:0:0,-3.31133,-10 0/0:64.4887:16:16:570:0:0:0,-4.81648,-10 0/0:34.3857:6:6:220:0:0:0,-1.80618,-10 0/0:64.4887:16:16:599:0:0:0,-4.81648,-10 0/0:34.3857:6:6:205:0:0:0,-1.80618,-10 0/0:34.3857:6:6:212:0:0:0,-1.80618,-10 0/0:79.5401:21:21:788:0:0:0,-6.32163,-10 0/0:43.4166:9:9:342:0:0:0,-2.70927,-10 0/0:55.4578:13:13:484:0:0:0,-3.91339,-10 scaffold_226 440050 . C T 1704.46 . AB=0.53719;ABP=4.46393;AC=7;AF=0.0376344;AN=186;AO=70;CIGAR=1X;DP=1502;DPB=1502;DPRA=1.16452;EPP=3.0103;EPPR=3.88374;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.97;NS=93;NUMALT=1;ODDS=3.75454;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2492;QR=52033;RO=1432;RPP=155.013;RPPR=3112.56;RUN=1;SAF=35;SAP=3.0103;SAR=35;SRF=704;SRP=3.88374;SRR=728;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.9025:12:12:413:0:0:0,-3.61236,-10 0/0:56.9231:14:14:527:0:0:0,-4.21442,-10 0/0:65.954:17:17:640:0:0:0,-5.11751,-10 0/0:35.851:7:7:219:0:0:0,-2.10721,-10 0/0:53.9128:13:13:467:0:0:0,-3.91339,-10 0/0:35.851:7:7:264:0:0:0,-2.10721,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/0:59.9334:15:15:518:0:0:0,-4.51545,-10 0/0:56.9231:14:14:492:0:0:0,-4.21442,-10 0/1:0.00106593:5:0:0:5:187:-10,-1.50515,0 0/1:0.00213211:6:0:0:6:205:-10,-1.80618,0 0/0:35.851:7:7:250:0:0:0,-2.10721,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/1:99:26:13:453:13:460:-10,0,-10 0/0:93.0468:26:26:928:0:0:0,-7.82678,-10 0/0:65.954:17:17:631:0:0:0,-5.11751,-10 0/0:53.9128:13:13:472:0:0:0,-3.91339,-10 0/0:50.9025:12:12:429:0:0:0,-3.61236,-10 0/0:90.0354:25:25:880:0:0:0,-7.52575,-10 0/1:99:25:9:334:16:605:-10,0,-10 0/0:53.9128:13:13:442:0:0:0,-3.91339,-10 0/0:99:38:38:1413:0:0:0,-10,-10 0/0:41.8716:9:9:317:0:0:0,-2.70927,-10 0/0:47.8922:11:11:403:0:0:0,-3.31133,-10 0/0:68.9642:18:18:627:0:0:0,-5.41854,-10 0/0:81.0053:22:22:777:0:0:0,-6.62266,-10 0/0:68.9642:18:18:683:0:0:0,-5.41854,-10 0/0:71.9746:19:19:714:0:0:0,-5.71957,-10 0/0:81.0053:22:22:788:0:0:0,-6.62266,-10 0/0:93.0468:26:26:946:0:0:0,-7.82678,-10 0/0:29.8304:5:5:190:0:0:0,-1.50515,-10 0/0:47.8922:11:11:413:0:0:0,-3.31133,-10 0/0:53.9128:13:13:472:0:0:0,-3.91339,-10 0/0:35.851:7:7:261:0:0:0,-2.10721,-10 0/0:53.9128:13:13:453:0:0:0,-3.91339,-10 0/0:41.8716:9:9:340:0:0:0,-2.70927,-10 0/0:35.851:7:7:234:0:0:0,-2.10721,-10 0/0:57.246:23:22:823:1:16:0,-3.96196,-10 0/0:53.9128:13:13:462:0:0:0,-3.91339,-10 0/0:41.8716:9:9:342:0:0:0,-2.70927,-10 0/0:81.0053:22:22:813:0:0:0,-6.62266,-10 0/0:44.8819:10:10:379:0:0:0,-3.0103,-10 0/0:71.9746:19:19:693:0:0:0,-5.71957,-10 0/0:93.0468:26:26:953:0:0:0,-7.82678,-10 0/0:56.9231:14:14:530:0:0:0,-4.21442,-10 0/0:59.9334:15:15:530:0:0:0,-4.51545,-10 0/0:99:45:45:1666:0:0:0,-10,-10 0/0:50.9025:12:12:452:0:0:0,-3.61236,-10 0/0:68.9642:18:18:665:0:0:0,-5.41854,-10 0/1:99:37:19:641:18:674:-10,0,-10 0/0:29.6209:13:12:421:1:16:0,-1.19945,-10 0/0:93.0468:26:26:983:0:0:0,-7.82678,-10 0/0:53.9128:13:13:492:0:0:0,-3.91339,-10 0/0:32.8407:6:6:228:0:0:0,-1.80618,-10 0/0:99:42:42:1531:0:0:0,-10,-10 0/0:44.8819:10:10:380:0:0:0,-3.0103,-10 0/0:71.9746:19:19:650:0:0:0,-5.71957,-10 0/0:38.8613:8:8:304:0:0:0,-2.40824,-10 0/0:59.9334:15:15:536:0:0:0,-4.51545,-10 0/0:53.9128:13:13:484:0:0:0,-3.91339,-10 0/0:68.9642:18:18:648:0:0:0,-5.41854,-10 0/0:0.0976833:16:15:524:1:38:-0.18764,0,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:74.9848:20:20:751:0:0:0,-6.0206,-10 0/0:35.851:7:7:243:0:0:0,-2.10721,-10 0/0:59.9334:15:15:544:0:0:0,-4.51545,-10 0/0:32.3093:14:13:457:1:16:0,-1.46829,-10 0/0:41.8716:9:9:308:0:0:0,-2.70927,-10 0/0:99:29:29:1033:0:0:0,-8.72987,-10 0/0:47.8922:11:11:372:0:0:0,-3.31133,-10 0/0:50.9025:12:12:440:0:0:0,-3.61236,-10 0/0:99:34:34:1260:0:0:0,-10,-10 0/0:59.9334:15:15:569:0:0:0,-4.51545,-10 0/0:47.8922:11:11:391:0:0:0,-3.31133,-10 0/0:99:33:33:1168:0:0:0,-9.93399,-10 0/0:41.8716:9:9:328:0:0:0,-2.70927,-10 0/0:47.8922:11:11:395:0:0:0,-3.31133,-10 0/0:44.8819:10:10:342:0:0:0,-3.0103,-10 0/0:23.8098:3:3:112:0:0:0,-0.90309,-10 0/0:47.8922:11:11:397:0:0:0,-3.31133,-10 0/0:88.6612:34:33:1215:1:16:0,-7.10354,-10 0/0:68.9642:18:18:655:0:0:0,-5.41854,-10 0/0:41.8716:9:9:341:0:0:0,-2.70927,-10 0/0:68.9642:18:18:660:0:0:0,-5.41854,-10 0/0:62.9437:16:16:576:0:0:0,-4.81648,-10 0/0:32.8407:6:6:222:0:0:0,-1.80618,-10 0/0:56.9231:14:14:528:0:0:0,-4.21442,-10 0/0:41.8716:9:9:329:0:0:0,-2.70927,-10 0/1:72.3504:6:3:114:3:107:-9.48152,0,-10 0/0:56.9231:14:14:504:0:0:0,-4.21442,-10 0/1:99:16:12:448:4:152:-10,0,-10 0/0:47.8922:11:11:418:0:0:0,-3.31133,-10 scaffold_226 440059 . T G 1255.95 . AB=0.71831;ABP=32.4016;AC=5;AF=0.0268817;AN=186;AO=51;CIGAR=1X;DP=1514;DPB=1514;DPRA=0.865974;EPP=5.09662;EPPR=4.93785;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9705;NS=93;NUMALT=1;ODDS=2.27561;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1874;QR=53973;RO=1460;RPP=113.755;RPPR=3147.36;RUN=1;SAF=22;SAP=5.09662;SAR=29;SRF=715;SRP=4.34888;SRR=745;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.0938921:12:0:0:12:427:-10,-3.61236,0 0/1:0.388399:14:0:0:14:531:-10,-4.21442,0 0/0:65.5329:17:17:646:0:0:0,-5.11751,-10 0/0:35.4299:7:7:250:0:0:0,-2.10721,-10 0/0:53.4917:13:13:492:0:0:0,-3.91339,-10 0/0:35.4299:7:7:263:0:0:0,-2.10721,-10 0/0:99:31:31:1157:0:0:0,-9.33193,-10 0/0:59.5123:15:15:552:0:0:0,-4.51545,-10 0/0:53.4917:14:13:471:0:0:0,-3.91339,-10 0/0:29.4093:5:5:190:0:0:0,-1.50515,-10 0/0:32.4196:6:6:226:0:0:0,-1.80618,-10 0/0:35.4299:7:7:256:0:0:0,-2.10721,-10 0/0:99:29:29:1095:0:0:0,-8.72987,-10 0/0:92.6256:26:26:958:0:0:0,-7.82678,-10 0/0:92.6256:26:26:975:0:0:0,-7.82678,-10 0/0:65.5329:17:17:623:0:0:0,-5.11751,-10 0/0:53.4917:13:13:494:0:0:0,-3.91339,-10 0/0:50.4814:12:12:450:0:0:0,-3.61236,-10 0/0:89.6144:25:25:876:0:0:0,-7.52575,-10 0/0:89.6144:25:25:933:0:0:0,-7.52575,-10 0/0:53.4917:13:13:463:0:0:0,-3.91339,-10 0/0:99:40:40:1491:0:0:0,-10,-10 0/0:44.4608:10:10:380:0:0:0,-3.0103,-10 0/0:47.4711:11:11:380:0:0:0,-3.31133,-10 0/0:68.5432:18:18:666:0:0:0,-5.41854,-10 0/0:80.5843:22:22:788:0:0:0,-6.62266,-10 0/0:68.5432:18:18:680:0:0:0,-5.41854,-10 0/0:71.5535:19:19:686:0:0:0,-5.71957,-10 0/0:80.5843:22:22:813:0:0:0,-6.62266,-10 0/1:99:26:11:413:15:555:-10,0,-10 0/0:29.4093:5:5:190:0:0:0,-1.50515,-10 0/0:47.4711:11:11:416:0:0:0,-3.31133,-10 0/0:53.4917:13:13:483:0:0:0,-3.91339,-10 0/0:35.4299:7:7:265:0:0:0,-2.10721,-10 0/0:53.4917:13:13:469:0:0:0,-3.91339,-10 0/1:0.0116261:9:0:0:9:323:-10,-2.70927,0 0/0:35.4299:7:7:257:0:0:0,-2.10721,-10 0/0:83.5947:23:23:873:0:0:0,-6.92369,-10 0/0:53.4917:13:13:485:0:0:0,-3.91339,-10 0/0:41.4505:9:9:342:0:0:0,-2.70927,-10 0/0:80.5843:22:22:819:0:0:0,-6.62266,-10 0/1:15.5881:10:9:341:1:38:-1.7897,0,-10 0/0:71.5535:19:19:703:0:0:0,-5.71957,-10 0/0:92.6256:26:26:963:0:0:0,-7.82678,-10 0/0:56.502:14:14:518:0:0:0,-4.21442,-10 0/0:59.5123:15:15:546:0:0:0,-4.51545,-10 0/0:99:47:47:1749:0:0:0,-10,-10 0/0:50.4814:12:12:456:0:0:0,-3.61236,-10 0/0:68.5432:18:18:669:0:0:0,-5.41854,-10 0/0:99:38:38:1381:0:0:0,-10,-10 0/0:53.4917:13:13:470:0:0:0,-3.91339,-10 0/0:92.6256:26:26:958:0:0:0,-7.82678,-10 0/0:56.502:14:14:531:0:0:0,-4.21442,-10 0/0:32.4196:6:6:228:0:0:0,-1.80618,-10 0/0:99:43:43:1617:0:0:0,-10,-10 0/0:44.4608:10:10:380:0:0:0,-3.0103,-10 0/0:71.5535:19:19:674:0:0:0,-5.71957,-10 0/0:38.4402:8:8:304:0:0:0,-2.40824,-10 0/0:62.5226:16:16:594:0:0:0,-4.81648,-10 0/0:53.4917:13:13:490:0:0:0,-3.91339,-10 0/0:71.5535:19:19:716:0:0:0,-5.71957,-10 0/0:62.5226:16:16:532:0:0:0,-4.81648,-10 0/0:99:32:32:1210:0:0:0,-9.63296,-10 0/0:74.5638:20:20:758:0:0:0,-6.0206,-10 0/0:35.4299:7:7:262:0:0:0,-2.10721,-10 0/0:56.502:15:14:509:0:0:0,-4.21442,-10 0/0:56.502:14:14:505:0:0:0,-4.21442,-10 0/0:41.4505:9:9:309:0:0:0,-2.70927,-10 0/0:99:29:29:1073:0:0:0,-8.72987,-10 0/0:47.4711:11:11:404:0:0:0,-3.31133,-10 0/0:50.4814:12:12:452:0:0:0,-3.61236,-10 0/0:99:34:34:1278:0:0:0,-10,-10 0/0:59.5123:15:15:546:0:0:0,-4.51545,-10 0/0:47.4711:11:11:409:0:0:0,-3.31133,-10 0/0:99:33:33:1214:0:0:0,-9.93399,-10 0/0:41.4505:9:9:335:0:0:0,-2.70927,-10 0/0:44.4608:11:10:362:0:0:0,-3.0103,-10 0/0:44.4608:10:10:351:0:0:0,-3.0103,-10 0/0:23.3887:3:3:114:0:0:0,-0.90309,-10 0/0:50.4814:12:12:421:0:0:0,-3.61236,-10 0/0:99:34:34:1276:0:0:0,-10,-10 0/0:68.5432:18:18:648:0:0:0,-5.41854,-10 0/0:41.4505:9:9:339:0:0:0,-2.70927,-10 0/0:71.5535:19:19:685:0:0:0,-5.71957,-10 0/0:62.5226:16:16:577:0:0:0,-4.81648,-10 0/0:32.4196:6:6:219:0:0:0,-1.80618,-10 0/0:56.502:14:14:506:0:0:0,-4.21442,-10 0/0:41.4505:9:9:340:0:0:0,-2.70927,-10 0/0:32.4196:6:6:220:0:0:0,-1.80618,-10 0/0:56.502:14:14:521:0:0:0,-4.21442,-10 0/0:62.5226:16:16:599:0:0:0,-4.81648,-10 0/0:47.4711:11:11:417:0:0:0,-3.31133,-10 scaffold_226 533194 . T G 4826.97 . AB=0.48583;ABP=3.44108;AC=15;AF=0.0815217;AN=184;AO=179;CIGAR=1X;DP=2070;DPB=2070;DPRA=1.19011;EPP=8.36013;EPPR=19.0249;GTI=0;LEN=1;MEANALT=1;MQM=59.2961;MQMR=59.6939;NS=92;NUMALT=1;ODDS=3.73947;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6542;QR=69783;RO=1888;RPP=391.704;RPPR=4102.75;RUN=1;SAF=79;SAP=8.36013;SAR=100;SRF=885;SRP=19.0249;SRR=1003;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.3038:20:20:735:0:0:0,-6.0206,-10 0/0:61.2729:17:17:623:0:0:0,-5.11751,-10 0/0:99:30:30:1073:0:0:0,-9.0309,-10 0/0:49.2317:13:13:479:0:0:0,-3.91339,-10 0/0:67.2935:19:19:701:0:0:0,-5.71957,-10 0/0:82.3449:24:24:905:0:0:0,-7.22472,-10 0/0:99:42:42:1540:0:0:0,-10,-10 1/1:16.4911:30:1:38:29:1049:-10,-3.75378,0 0/0:70.3038:20:20:756:0:0:0,-6.0206,-10 0/0:46.2214:12:12:450:0:0:0,-3.61236,-10 0/0:43.2111:11:11:408:0:0:0,-3.31133,-10 0/0:43.2111:11:11:381:0:0:0,-3.31133,-10 0/1:99:33:18:650:15:565:-10,0,-10 0/0:97.3953:29:29:1069:0:0:0,-8.72987,-10 0/0:97.3953:29:29:1038:0:0:0,-8.72987,-10 0/0:97.3953:29:29:1045:0:0:0,-8.72987,-10 0/0:85.3552:25:25:935:0:0:0,-7.52575,-10 0/0:67.2935:19:19:716:0:0:0,-5.71957,-10 0/0:94.3856:28:28:1042:0:0:0,-8.42884,-10 0/1:99:31:17:599:14:528:-10,0,-10 0/0:59.1631:33:32:1177:1:37:0,-4.71548,-10 0/0:99:42:42:1549:0:0:0,-10,-10 0/0:61.2729:17:17:645:0:0:0,-5.11751,-10 0/0:99:31:31:1119:0:0:0,-9.33193,-10 0/0:49.2317:13:13:493:0:0:0,-3.91339,-10 0/1:99:18:6:228:12:445:-10,0,-10 0/0:73.314:21:21:786:0:0:0,-6.32163,-10 0/0:58.2626:16:16:604:0:0:0,-4.81648,-10 0/0:94.3856:28:28:1052:0:0:0,-8.42884,-10 0/1:99:24:12:453:12:427:-10,0,-10 0/0:46.2214:12:12:448:0:0:0,-3.61236,-10 0/0:43.2111:11:11:418:0:0:0,-3.31133,-10 0/0:70.3038:20:20:745:0:0:0,-6.0206,-10 0/0:61.2729:17:17:643:0:0:0,-5.11751,-10 0/0:61.2729:17:17:619:0:0:0,-5.11751,-10 0/0:34.1802:8:8:297:0:0:0,-2.40824,-10 0/0:46.2214:12:12:431:0:0:0,-3.61236,-10 0/0:99:38:38:1408:0:0:0,-10,-10 0/0:64.2832:18:18:651:0:0:0,-5.41854,-10 0/0:70.3038:20:20:758:0:0:0,-6.0206,-10 0/0:99:31:31:1153:0:0:0,-9.33193,-10 0/0:82.3449:24:24:904:0:0:0,-7.22472,-10 0/0:70.3038:20:20:740:0:0:0,-6.0206,-10 0/0:99:30:30:1127:0:0:0,-9.0309,-10 0/1:99:24:16:606:8:296:-10,0,-10 0/1:99:20:9:342:11:416:-10,0,-10 0/1:99:48:23:870:25:897:-10,0,-10 0/1:99:23:15:554:8:280:-10,0,-10 1/1:17.6082:14:0:0:14:503:-10,-4.21442,0 0/0:99:39:37:1375:0:0:0,-10,-10 0/0:52.242:14:14:530:0:0:0,-4.21442,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:64.2832:18:18:669:0:0:0,-5.41854,-10 0/0:34.1802:8:8:290:0:0:0,-2.40824,-10 0/0:99:34:34:1225:0:0:0,-10,-10 1/1:20.6185:15:0:0:15:548:-10,-4.51545,0 0/1:99:26:11:416:15:551:-10,0,-10 0/0:55.2523:15:15:567:0:0:0,-4.51545,-10 0/0:70.3038:20:20:716:0:0:0,-6.0206,-10 0/0:49.2317:13:13:471:0:0:0,-3.91339,-10 0/0:99:35:35:1306:0:0:0,-10,-10 0/0:82.3449:24:24:896:0:0:0,-7.22472,-10 0/0:99:33:33:1179:0:0:0,-9.93399,-10 0/0:94.3856:28:28:1031:0:0:0,-8.42884,-10 0/0:43.2111:11:11:411:0:0:0,-3.31133,-10 0/0:99:40:40:1482:0:0:0,-10,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:46.2214:12:12:449:0:0:0,-3.61236,-10 0/0:99:39:39:1463:0:0:0,-10,-10 0/0:40.2008:10:10:377:0:0:0,-3.0103,-10 0/0:64.2832:19:18:680:0:0:0,-5.41854,-10 0/0:73.314:21:21:774:0:0:0,-6.32163,-10 0/0:97.3953:29:29:1066:0:0:0,-8.72987,-10 0/0:52.242:14:14:509:0:0:0,-4.21442,-10 0/0:94.3856:28:28:1043:0:0:0,-8.42884,-10 0/0:61.2729:17:17:623:0:0:0,-5.11751,-10 0/0:70.3038:20:20:729:0:0:0,-6.0206,-10 0/0:61.2729:17:17:601:0:0:0,-5.11751,-10 0/0:37.1905:9:9:310:0:0:0,-2.70927,-10 0/0:22.139:4:4:151:0:0:0,-1.20412,-10 0/0:99:33:33:1243:0:0:0,-9.93399,-10 0/0:99:31:31:1104:0:0:0,-9.33193,-10 0/0:94.3856:28:28:1060:0:0:0,-8.42884,-10 0/0:46.2214:12:12:456:0:0:0,-3.61236,-10 0/0:58.2626:16:16:582:0:0:0,-4.81648,-10 0/0:52.242:14:14:531:0:0:0,-4.21442,-10 0/0:58.2626:16:16:607:0:0:0,-4.81648,-10 0/0:49.2317:13:13:494:0:0:0,-3.91339,-10 0/0:40.2008:10:10:365:0:0:0,-3.0103,-10 0/0:99:47:47:1723:0:0:0,-10,-10 0/0:97.3953:29:29:1062:0:0:0,-8.72987,-10 0/0:79.3346:23:23:855:0:0:0,-6.92369,-10 scaffold_226 533233 . T G 17460.6 . AB=0.487288;ABP=3.67278;AC=54;AF=0.293478;AN=184;AO=619;CIGAR=1X;DP=2084;DPB=2084;DPRA=1.18637;EPP=4.2767;EPPR=29.6799;GTI=0;LEN=1;MEANALT=1.02703;MQM=59.5396;MQMR=59.6621;NS=92;NUMALT=1;ODDS=1.30006;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=22520;QR=53266;RO=1462;RPP=1347.15;RPPR=3177.7;RUN=1;SAF=300;SAP=4.2767;SAR=319;SRF=664;SRP=29.6799;SRR=798;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.6556:20:20:715:0:0:0,-6.0206,-10 0/0:49.6247:18:17:573:0:0:0,-5.11751,-10 0/0:88.7577:30:30:1088:0:0:0,-9.0309,-10 0/0:40.5938:14:14:530:0:0:0,-4.21442,-10 1/1:41.1643:19:0:0:19:682:-10,-5.71957,0 0/0:73.7071:25:25:921:0:0:0,-7.52575,-10 0/0:99:42:42:1532:0:0:0,-10,-10 0/0:88.7577:30:30:1124:0:0:0,-9.0309,-10 0/0:58.6556:20:20:758:0:0:0,-6.0206,-10 0/0:34.5732:12:12:438:0:0:0,-3.61236,-10 0/0:31.5629:11:11:415:0:0:0,-3.31133,-10 0/0:31.5629:11:11:380:0:0:0,-3.31133,-10 0/0:97.7881:33:33:1211:0:0:0,-9.93399,-10 0/0:85.7482:29:29:1079:0:0:0,-8.72987,-10 0/0:85.7482:29:29:1039:0:0:0,-8.72987,-10 0/0:88.7577:30:30:1064:0:0:0,-9.0309,-10 0/0:73.7071:25:25:939:0:0:0,-7.52575,-10 0/0:55.6453:19:19:716:0:0:0,-5.71957,-10 0/1:99:28:11:402:17:604:-10,0,-10 0/0:91.7686:31:31:1113:0:0:0,-9.33193,-10 1/1:83.3082:33:0:0:33:1205:-10,-9.93399,0 0/1:99:42:22:803:20:746:-10,0,-10 1/1:35.1437:17:0:0:17:599:-10,-5.11751,0 1/1:77.2878:31:0:0:31:1124:-10,-9.33193,0 1/1:23.1025:13:0:0:13:489:-10,-3.91339,0 0/1:99:18:12:421:6:223:-10,0,-10 1/1:47.1849:21:0:0:21:762:-10,-6.32163,0 0/0:49.6247:17:17:622:0:0:0,-5.11751,-10 1/1:68.257:28:0:0:28:1038:-10,-8.42884,0 0/1:99:24:12:447:12:454:-10,0,-10 1/1:20.0922:12:0:0:12:440:-10,-3.61236,0 1/1:17.0819:11:0:0:11:417:-10,-3.31133,0 1/1:44.1746:20:0:0:20:754:-10,-6.0206,0 0/0:49.6247:17:17:645:0:0:0,-5.11751,-10 1/1:8.96091:17:1:16:16:603:-10,-2.28706,0 0/0:22.532:8:8:275:0:0:0,-2.40824,-10 0/0:34.5732:12:12:432:0:0:0,-3.61236,-10 0/1:99:38:23:832:15:505:-10,0,-10 0/0:52.635:18:18:649:0:0:0,-5.41854,-10 0/1:99:20:9:340:11:414:-10,0,-10 1/1:77.2878:31:0:0:31:1106:-10,-9.33193,0 1/1:56.2158:24:0:0:24:898:-10,-7.22472,0 1/1:44.1746:20:0:0:20:728:-10,-6.0206,0 0/1:99:31:13:484:18:652:-10,0,-10 0/0:70.6968:24:24:888:0:0:0,-7.22472,-10 0/1:99:21:11:418:10:380:-10,0,-10 0/1:99:48:24:890:23:859:-10,0,-10 0/1:99:23:8:302:15:539:-10,0,-10 0/0:40.5938:14:14:526:0:0:0,-4.21442,-10 0/1:99:39:19:698:20:704:-10,0,-10 1/1:26.1128:14:0:0:14:507:-10,-4.21442,0 0/1:99:34:20:702:14:477:-10,0,-10 1/1:38.154:18:0:0:18:651:-10,-5.41854,0 1/1:8.05099:8:0:0:8:289:-10,-2.40824,0 1/1:86.3187:34:0:0:34:1204:-10,-10,0 0/0:43.6041:15:15:559:0:0:0,-4.51545,-10 0/1:99:27:15:562:12:455:-10,0,-10 0/0:43.6041:15:15:550:0:0:0,-4.51545,-10 0/0:58.6556:20:20:735:0:0:0,-6.0206,-10 0/0:37.5835:13:13:490:0:0:0,-3.91339,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:70.6968:24:24:862:0:0:0,-7.22472,-10 0/0:57.2145:34:33:1155:1:31:0,-5.60354,-10 0/0:82.7378:28:28:994:0:0:0,-8.42884,-10 0/0:28.5526:10:10:356:0:0:0,-3.0103,-10 0/1:99:40:23:853:17:591:-10,0,-10 0/0:65.1181:31:30:1111:1:15:0,-6.34057,-10 0/0:34.5732:12:12:429:0:0:0,-3.61236,-10 0/0:99:39:39:1421:0:0:0,-10,-10 0/0:28.5526:10:10:370:0:0:0,-3.0103,-10 0/0:58.6556:20:20:659:0:0:0,-6.0206,-10 0/0:61.6659:21:21:770:0:0:0,-6.32163,-10 0/0:88.7577:30:30:1121:0:0:0,-9.0309,-10 0/0:40.5938:14:14:512:0:0:0,-4.21442,-10 0/0:82.7378:28:28:1011:0:0:0,-8.42884,-10 0/0:49.6247:17:17:629:0:0:0,-5.11751,-10 0/0:58.6556:20:20:704:0:0:0,-6.0206,-10 0/0:49.6247:17:17:631:0:0:0,-5.11751,-10 0/0:25.5423:9:9:316:0:0:0,-2.70927,-10 0/0:10.4908:4:4:130:0:0:0,-1.20412,-10 0/0:97.7881:33:33:1196:0:0:0,-9.93399,-10 0/0:91.7686:31:31:1123:0:0:0,-9.33193,-10 0/0:82.7378:28:28:1051:0:0:0,-8.42884,-10 0/0:40.5938:14:14:521:0:0:0,-4.21442,-10 0/0:46.6144:16:16:593:0:0:0,-4.81648,-10 0/0:40.5938:14:14:529:0:0:0,-4.21442,-10 1/1:35.1437:17:0:0:17:644:-10,-5.11751,0 0/0:37.5835:13:13:492:0:0:0,-3.91339,-10 0/1:99:10:5:167:5:166:-10,0,-10 0/0:99:47:47:1655:0:0:0,-10,-10 0/1:99:29:14:488:15:565:-10,0,-10 0/0:64.6762:23:22:806:0:0:0,-6.62266,-10 scaffold_226 759487 . C T 1442.68 . AB=0.441667;ABP=6.55704;AC=3;AF=0.0163043;AN=184;AO=56;CIGAR=1X;DP=3690;DPB=3690;DPRA=0.948377;EPP=3.16541;EPPR=3.38428;GTI=0;LEN=1;MEANALT=1;MQM=44.4286;MQMR=48.1496;NS=92;NUMALT=1;ODDS=13.838;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2026;QR=131598;RO=3629;RPP=124.613;RPPR=7883.28;RUN=1;SAF=29;SAP=3.16541;SAR=27;SRF=1827;SRP=3.38428;SRR=1802;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:37:37:1339:0:0:0,-10,-10 0/0:99:20:20:703:0:0:0,-6.0206,-10 0/0:99:39:39:1417:0:0:0,-10,-10 0/0:99:34:34:1288:0:0:0,-10,-10 0/0:99:25:25:896:0:0:0,-7.52575,-10 0/0:99:20:20:743:0:0:0,-6.0206,-10 0/0:99:84:84:3044:0:0:0,-10,-10 0/0:99:47:47:1654:0:0:0,-10,-10 0/0:86.9286:32:31:1110:1:38:0,-4.32781,-10 0/0:60.0975:6:6:228:0:0:0,-1.80618,-10 0/0:66.1181:8:8:301:0:0:0,-2.40824,-10 0/1:99:19:8:292:11:390:-10,0,-10 0/0:99:53:53:1878:0:0:0,-10,-10 0/0:99:69:69:2521:0:0:0,-10,-10 0/0:99:54:54:1953:0:0:0,-10,-10 0/0:99:48:48:1760:0:0:0,-10,-10 0/0:99:44:44:1639:0:0:0,-10,-10 0/0:99:20:20:726:0:0:0,-6.0206,-10 0/0:99:46:46:1694:0:0:0,-10,-10 0/0:99:65:65:2391:0:0:0,-10,-10 0/0:99:32:32:1162:0:0:0,-9.63296,-10 0/0:99:67:67:2458:0:0:0,-10,-10 0/0:96.2218:18:18:663:0:0:0,-5.41854,-10 0/0:99:50:50:1810:0:0:0,-10,-10 0/0:99:69:69:2530:0:0:0,-10,-10 0/0:99:56:56:2012:0:0:0,-10,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:99:27:27:979:0:0:0,-8.12781,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:99:81:80:2830:0:0:0,-10,-10 0/0:63.1078:7:7:238:0:0:0,-2.10721,-10 0/0:90.2007:16:16:579:0:0:0,-4.81648,-10 0/0:99:47:46:1692:0:0:0,-10,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 0/0:99:55:55:2035:0:0:0,-10,-10 0/0:69.1284:9:9:331:0:0:0,-2.70927,-10 0/0:99:19:19:681:0:0:0,-5.71957,-10 0/0:99:60:60:2215:0:0:0,-10,-10 0/0:99:45:44:1626:1:15:0,-10,-10 0/0:99:27:27:977:0:0:0,-8.12781,-10 0/0:99:72:72:2654:0:0:0,-10,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:99:37:37:1316:0:0:0,-10,-10 0/0:99:72:71:2591:0:0:0,-10,-10 0/0:99:46:46:1672:0:0:0,-10,-10 0/0:99:22:22:812:0:0:0,-6.62266,-10 0/0:99:88:88:3231:0:0:0,-10,-10 0/0:99:59:59:2147:0:0:0,-10,-10 0/0:84.1795:14:14:532:0:0:0,-4.21442,-10 0/0:99:94:94:3311:0:0:0,-10,-10 0/0:99:22:22:779:0:0:0,-6.62266,-10 0/0:99:79:78:2821:0:0:0,-10,-10 0/0:90.2007:16:16:604:0:0:0,-4.81648,-10 0/0:84.1795:14:14:524:0:0:0,-4.21442,-10 0/0:99:91:91:3288:0:0:0,-10,-10 0/0:99:23:23:822:0:0:0,-6.92369,-10 0/0:99:36:36:1267:0:0:0,-10,-10 0/0:84.1795:14:14:440:0:0:0,-4.21442,-10 0/0:99:39:39:1477:0:0:0,-10,-10 0/0:78.1593:12:12:456:0:0:0,-3.61236,-10 0/0:99:66:66:2446:0:0:0,-10,-10 0/0:99:44:44:1559:0:0:0,-10,-10 0/1:99:80:52:1919:28:1038:-10,0,-10 0/0:99:32:31:1072:1:14:0,-6.72781,-10 0/0:99:41:41:1463:0:0:0,-10,-10 0/0:99:42:42:1525:0:0:0,-10,-10 0/0:99:43:43:1459:0:0:0,-10,-10 0/0:99:21:21:744:0:0:0,-6.32163,-10 0/0:99:74:74:2682:0:0:0,-10,-10 0/0:99:20:20:693:0:0:0,-6.0206,-10 0/0:99:48:48:1760:0:0:0,-10,-10 0/0:99:75:75:2726:0:0:0,-10,-10 0/0:99:55:55:1990:0:0:0,-10,-10 0/0:99:43:43:1531:0:0:0,-10,-10 0/0:99:55:55:2062:0:0:0,-10,-10 0/0:99:23:23:835:0:0:0,-6.92369,-10 0/0:99:25:25:875:0:0:0,-7.52575,-10 0/0:99:26:26:981:0:0:0,-7.82678,-10 0/0:66.1181:8:8:290:0:0:0,-2.40824,-10 0/1:99:21:7:258:14:531:-10,0,-10 0/0:99:53:53:1950:0:0:0,-10,-10 0/0:99:56:56:2053:0:0:0,-10,-10 0/0:99:49:49:1767:0:0:0,-10,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:99:49:49:1827:0:0:0,-10,-10 0/0:69.1284:9:9:314:0:0:0,-2.70927,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:99:28:27:993:0:0:0,-8.12781,-10 0/0:63.1078:7:7:233:0:0:0,-2.10721,-10 0/0:99:30:30:1000:0:0:0,-9.0309,-10 0/0:99:26:26:875:0:0:0,-7.82678,-10 0/0:99:37:37:1336:0:0:0,-10,-10 scaffold_226 797414 . A G 176.001 . AB=0.727273;ABP=7.94546;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1328;DPB=1328;DPRA=1.2181;EPP=3.25157;EPPR=4.04237;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9452;NS=92;NUMALT=1;ODDS=8.95473;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=340;QR=47812;RO=1315;RPP=22.5536;RPPR=2815.23;RUN=1;SAF=4;SAP=3.25157;SAR=5;SRF=648;SRP=3.60642;SRR=667;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.9442:7:7:266:0:0:0,-2.10721,-10 0/0:47.9236:5:5:167:0:0:0,-1.50515,-10 0/0:87.0573:18:18:580:0:0:0,-5.41854,-10 0/0:56.9545:8:8:301:0:0:0,-2.40824,-10 0/0:59.9648:9:9:337:0:0:0,-2.70927,-10 0/0:53.9442:7:7:266:0:0:0,-2.10721,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:81.0369:16:16:578:0:0:0,-4.81648,-10 0/0:47.9236:5:5:190:0:0:0,-1.50515,-10 0/0:50.9339:6:6:224:0:0:0,-1.80618,-10 0/0:47.9236:5:5:189:0:0:0,-1.50515,-10 0/0:50.9339:6:6:226:0:0:0,-1.80618,-10 0/0:53.2659:24:23:835:1:38:0,-2.04451,-10 0/0:96.0891:21:21:735:0:0:0,-6.32163,-10 0/0:87.0573:18:18:650:0:0:0,-5.41854,-10 0/0:78.0266:15:15:520:0:0:0,-4.51545,-10 0/0:84.0471:17:17:640:0:0:0,-5.11751,-10 0/0:50.9339:6:6:226:0:0:0,-1.80618,-10 0/0:93.0785:21:20:744:0:0:0,-6.0206,-10 0/0:99:31:30:1033:0:0:0,-9.0309,-10 0/0:93.0785:20:20:681:0:0:0,-6.0206,-10 0/0:93.0785:21:20:747:0:0:0,-6.0206,-10 0/0:53.9442:7:7:248:0:0:0,-2.10721,-10 0/0:68.9957:12:12:456:0:0:0,-3.61236,-10 0/0:75.0163:14:14:518:0:0:0,-4.21442,-10 0/0:93.0785:20:20:731:0:0:0,-6.0206,-10 0/0:87.0573:18:18:654:0:0:0,-5.41854,-10 0/0:78.0266:15:15:555:0:0:0,-4.51545,-10 0/0:78.0266:15:15:564:0:0:0,-4.51545,-10 0/0:99:28:27:966:0:0:0,-8.12781,-10 0/0:38.8927:2:2:75:0:0:0,-0.60206,-7.125 0/0:50.9339:6:6:222:0:0:0,-1.80618,-10 0/0:72.006:13:13:477:0:0:0,-3.91339,-10 0/0:59.9648:9:9:310:0:0:0,-2.70927,-10 0/0:75.0163:14:14:531:0:0:0,-4.21442,-10 0/0:44.9133:4:4:146:0:0:0,-1.20412,-10 0/0:56.9545:8:8:300:0:0:0,-2.40824,-10 0/0:99:25:25:886:0:0:0,-7.52575,-10 0/0:84.0471:17:17:570:0:0:0,-5.11751,-10 0/0:65.9854:11:11:390:0:0:0,-3.31133,-10 0/0:99:35:35:1290:0:0:0,-10,-10 0/0:84.0471:17:17:626:0:0:0,-5.11751,-10 0/0:87.0573:18:18:643:0:0:0,-5.41854,-10 0/0:99:23:23:830:0:0:0,-6.92369,-10 0/0:65.9854:11:11:393:0:0:0,-3.31133,-10 0/0:59.9648:9:9:302:0:0:0,-2.70927,-10 0/0:99:36:36:1314:0:0:0,-10,-10 0/0:99:23:23:857:0:0:0,-6.92369,-10 0/0:53.9442:7:7:261:0:0:0,-2.10721,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:50.9339:6:6:224:0:0:0,-1.80618,-10 0/0:99:23:23:841:0:0:0,-6.92369,-10 0/0:62.9751:10:10:379:0:0:0,-3.0103,-10 0/0:47.9236:5:5:182:0:0:0,-1.50515,-10 0/0:99:27:27:981:0:0:0,-8.12781,-10 0/0:72.006:13:13:477:0:0:0,-3.91339,-10 0/0:68.9957:12:12:420:0:0:0,-3.61236,-10 0/0:59.9648:9:9:329:0:0:0,-2.70927,-10 0/0:56.9545:8:8:272:0:0:0,-2.40824,-10 0/0:47.9236:5:5:168:0:0:0,-1.50515,-10 0/0:96.0891:21:21:786:0:0:0,-6.32163,-10 0/0:81.0369:16:16:587:0:0:0,-4.81648,-10 0/0:99:29:29:1051:0:0:0,-8.72987,-10 0/0:68.9957:12:12:455:0:0:0,-3.61236,-10 0/0:44.9133:4:4:150:0:0:0,-1.20412,-10 0/0:99:22:22:779:0:0:0,-6.62266,-10 0/0:68.9957:12:12:429:0:0:0,-3.61236,-10 0/0:72.006:13:13:476:0:0:0,-3.91339,-10 0/0:99:23:23:838:0:0:0,-6.92369,-10 0/0:65.9854:11:11:404:0:0:0,-3.31133,-10 0/0:81.0369:16:16:592:0:0:0,-4.81648,-10 0/0:84.0471:17:17:612:0:0:0,-5.11751,-10 0/1:99:11:3:114:8:302:-10,0,-9.54615 0/0:62.9751:10:10:371:0:0:0,-3.0103,-10 0/0:99:23:23:827:0:0:0,-6.92369,-10 0/0:78.0266:15:15:561:0:0:0,-4.51545,-10 0/0:53.9442:7:7:266:0:0:0,-2.10721,-10 0/0:65.9854:11:11:408:0:0:0,-3.31133,-10 0/0:41.903:3:3:85:0:0:0,-0.90309,-7.93333 0/0:41.903:3:3:114:0:0:0,-0.90309,-10 0/0:99:28:28:1034:0:0:0,-8.42884,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:75.0163:14:14:531:0:0:0,-4.21442,-10 0/0:72.006:13:13:492:0:0:0,-3.91339,-10 0/0:87.0573:18:18:678:0:0:0,-5.41854,-10 0/0:38.8927:2:2:76:0:0:0,-0.60206,-7.22 0/0:87.0573:18:18:649:0:0:0,-5.41854,-10 0/0:75.0163:14:14:493:0:0:0,-4.21442,-10 0/0:44.9133:4:4:148:0:0:0,-1.20412,-10 0/0:68.9957:12:12:456:0:0:0,-3.61236,-10 0/0:53.9442:7:7:262:0:0:0,-2.10721,-10 0/0:65.9854:11:11:405:0:0:0,-3.31133,-10 scaffold_226 797417 . G A 601.628 . AB=0.727273;ABP=17.8158;AC=2;AF=0.0108696;AN=184;AO=24;CIGAR=1X;DP=1328;DPB=1328;DPRA=1.14672;EPP=3.37221;EPPR=4.41184;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.911;NS=92;NUMALT=1;ODDS=4.05481;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=892;QR=47604;RO=1303;RPP=55.1256;RPPR=2771.96;RUN=1;SAF=13;SAP=3.37221;SAR=11;SRF=642;SRP=3.61191;SRR=661;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:33.0038:7:7:264:0:0:0,-2.10721,-10 0/0:26.9832:5:5:180:0:0:0,-1.50515,-10 0/0:66.1171:18:18:674:0:0:0,-5.41854,-10 0/0:36.0141:8:8:299:0:0:0,-2.40824,-10 0/0:39.0244:9:9:318:0:0:0,-2.70927,-10 0/0:33.0038:7:7:266:0:0:0,-2.10721,-10 0/0:99:32:32:1195:0:0:0,-9.63296,-10 0/0:60.0965:16:16:582:0:0:0,-4.81648,-10 0/0:26.9832:5:5:189:0:0:0,-1.50515,-10 0/0:29.9935:6:6:227:0:0:0,-1.80618,-10 0/0:26.9832:5:5:189:0:0:0,-1.50515,-10 0/0:29.9935:6:6:219:0:0:0,-1.80618,-10 0/0:84.1788:24:24:890:0:0:0,-7.22472,-10 0/0:75.148:21:21:786:0:0:0,-6.32163,-10 0/0:66.1171:18:18:666:0:0:0,-5.41854,-10 0/0:57.0862:15:15:540:0:0:0,-4.51545,-10 0/0:63.1068:17:17:643:0:0:0,-5.11751,-10 0/0:29.9935:6:6:227:0:0:0,-1.80618,-10 0/0:72.1377:21:20:735:0:0:0,-6.0206,-10 0/0:99:31:31:1099:0:0:0,-9.33193,-10 0/0:72.1377:20:20:719:0:0:0,-6.0206,-10 0/0:75.148:21:21:747:0:0:0,-6.32163,-10 0/0:33.0038:7:7:265:0:0:0,-2.10721,-10 0/0:48.0553:12:12:453:0:0:0,-3.61236,-10 0/0:54.0759:14:14:489:0:0:0,-4.21442,-10 0/0:72.1377:20:20:720:0:0:0,-6.0206,-10 0/0:66.1171:18:18:648:0:0:0,-5.41854,-10 0/0:57.0862:15:15:533:0:0:0,-4.51545,-10 0/0:57.0862:15:15:547:0:0:0,-4.51545,-10 0/0:96.2193:28:28:1017:0:0:0,-8.42884,-10 0/0:17.9523:2:2:69:0:0:0,-0.60206,-6.555 0/0:29.9935:6:6:221:0:0:0,-1.80618,-10 0/0:51.0656:13:13:459:0:0:0,-3.91339,-10 0/0:39.0244:9:9:336:0:0:0,-2.70927,-10 0/0:54.0759:14:14:532:0:0:0,-4.21442,-10 0/0:23.9729:4:4:152:0:0:0,-1.20412,-10 0/0:36.0141:8:8:301:0:0:0,-2.40824,-10 0/0:87.1891:25:25:911:0:0:0,-7.52575,-10 0/0:63.1068:17:17:622:0:0:0,-5.11751,-10 0/0:45.045:11:11:376:0:0:0,-3.31133,-10 0/0:99:35:35:1258:0:0:0,-10,-10 0/0:63.1068:17:17:606:0:0:0,-5.11751,-10 0/0:66.1171:18:18:674:0:0:0,-5.41854,-10 0/0:81.1686:23:23:860:0:0:0,-6.92369,-10 0/0:45.045:11:11:411:0:0:0,-3.31133,-10 0/0:39.0244:9:9:318:0:0:0,-2.70927,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:81.1686:23:23:864:0:0:0,-6.92369,-10 0/0:33.0038:7:7:219:0:0:0,-2.10721,-10 0/0:93.2094:27:27:918:0:0:0,-8.12781,-10 0/0:29.9935:6:6:223:0:0:0,-1.80618,-10 0/0:81.1686:23:23:824:0:0:0,-6.92369,-10 0/0:42.0347:10:10:361:0:0:0,-3.0103,-10 0/0:26.9832:5:5:181:0:0:0,-1.50515,-10 0/0:93.2094:27:27:1014:0:0:0,-8.12781,-10 0/0:51.0656:13:13:445:0:0:0,-3.91339,-10 0/0:48.0553:12:12:425:0:0:0,-3.61236,-10 0/0:39.0244:9:9:340:0:0:0,-2.70927,-10 0/0:36.0141:8:8:299:0:0:0,-2.40824,-10 0/0:26.9832:5:5:168:0:0:0,-1.50515,-10 0/0:75.148:21:21:794:0:0:0,-6.32163,-10 0/0:60.0965:16:16:589:0:0:0,-4.81648,-10 0/1:99:29:9:331:20:745:-10,0,-10 0/0:48.0553:12:12:442:0:0:0,-3.61236,-10 0/1:4.05636e-05:4:0:0:4:147:-10,-1.20412,0 0/0:78.1583:22:22:806:0:0:0,-6.62266,-10 0/0:48.0553:12:12:436:0:0:0,-3.61236,-10 0/0:51.0656:13:13:487:0:0:0,-3.91339,-10 0/0:81.1686:23:23:864:0:0:0,-6.92369,-10 0/0:45.045:11:11:384:0:0:0,-3.31133,-10 0/0:60.0965:16:16:589:0:0:0,-4.81648,-10 0/0:63.1068:17:17:619:0:0:0,-5.11751,-10 0/0:45.045:11:11:411:0:0:0,-3.31133,-10 0/0:42.0347:10:10:353:0:0:0,-3.0103,-10 0/0:81.1686:23:23:858:0:0:0,-6.92369,-10 0/0:57.0862:15:15:521:0:0:0,-4.51545,-10 0/0:33.0038:7:7:257:0:0:0,-2.10721,-10 0/0:45.045:11:11:405:0:0:0,-3.31133,-10 0/0:20.9626:3:3:91:0:0:0,-0.90309,-8.49333 0/0:20.9626:3:3:112:0:0:0,-0.90309,-10 0/0:96.2193:28:28:1003:0:0:0,-8.42884,-10 0/0:96.2193:28:28:1011:0:0:0,-8.42884,-10 0/0:54.0759:14:14:531:0:0:0,-4.21442,-10 0/0:51.0656:13:13:489:0:0:0,-3.91339,-10 0/0:66.1171:18:18:674:0:0:0,-5.41854,-10 0/0:17.9523:2:2:76:0:0:0,-0.60206,-7.22 0/0:66.1171:18:18:649:0:0:0,-5.41854,-10 0/0:54.0759:14:14:523:0:0:0,-4.21442,-10 0/0:23.9729:4:4:151:0:0:0,-1.20412,-10 0/0:48.0553:12:12:451:0:0:0,-3.61236,-10 0/0:33.0038:7:7:265:0:0:0,-2.10721,-10 0/0:45.045:11:11:413:0:0:0,-3.31133,-10 scaffold_226 797458 . G A 21.1808 . AB=0.272727;ABP=7.94546;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1X;DP=1317;DPB=1317;DPRA=1.16067;EPP=4.45795;EPPR=3.88651;GTI=0;LEN=1;MEANALT=1;MQM=59.6667;MQMR=59.8986;NS=92;NUMALT=1;ODDS=4.86938;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=161;QR=47216;RO=1311;RPP=16.0391;RPPR=2849.81;RUN=1;SAF=2;SAP=4.45795;SAR=4;SRF=644;SRP=3.88651;SRR=667;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:68.931:7:7:263:0:0:0,-2.10721,-10 0/0:62.9104:5:5:166:0:0:0,-1.50515,-10 0/0:99:17:17:605:0:0:0,-5.11751,-10 0/0:71.9413:8:8:296:0:0:0,-2.40824,-10 0/0:74.9516:9:9:314:0:0:0,-2.70927,-10 0/0:68.931:7:7:264:0:0:0,-2.10721,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:96.0229:16:16:570:0:0:0,-4.81648,-10 0/0:62.9104:5:5:181:0:0:0,-1.50515,-10 0/0:65.9207:6:6:223:0:0:0,-1.80618,-10 0/0:62.9104:5:5:190:0:0:0,-1.50515,-10 0/0:65.9207:6:6:221:0:0:0,-1.80618,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:99:21:21:721:0:0:0,-6.32163,-10 0/0:99:18:18:642:0:0:0,-5.41854,-10 0/0:93.013:15:15:529:0:0:0,-4.51545,-10 0/0:99:17:17:609:0:0:0,-5.11751,-10 0/0:65.9207:6:6:219:0:0:0,-1.80618,-10 0/0:79.3325:21:20:714:1:16:0,-3.39941,-10 0/0:99:29:29:983:0:0:0,-8.72987,-10 0/0:99:20:20:707:0:0:0,-6.0206,-10 0/0:99:21:21:769:0:0:0,-6.32163,-10 0/0:68.931:7:7:265:0:0:0,-2.10721,-10 0/0:80.9721:11:11:395:0:0:0,-3.31133,-10 0/0:90.0029:14:14:486:0:0:0,-4.21442,-10 0/0:99:20:20:751:0:0:0,-6.0206,-10 0/0:99:18:18:629:0:0:0,-5.41854,-10 0/0:93.013:15:15:531:0:0:0,-4.51545,-10 0/0:90.0029:14:14:511:0:0:0,-4.21442,-10 0/0:99:28:28:949:0:0:0,-8.42884,-10 0/0:53.8795:2:2:71:0:0:0,-0.60206,-6.745 0/0:65.9207:6:6:228:0:0:0,-1.80618,-10 0/0:83.9824:12:12:434:0:0:0,-3.61236,-10 0/0:74.9516:9:9:330:0:0:0,-2.70927,-10 0/0:90.0029:14:14:532:0:0:0,-4.21442,-10 0/0:59.9001:4:4:144:0:0:0,-1.20412,-10 0/0:71.9413:8:8:303:0:0:0,-2.40824,-10 0/0:99:25:25:888:0:0:0,-7.52575,-10 0/0:99:17:17:598:0:0:0,-5.11751,-10 0/0:80.9721:11:11:358:0:0:0,-3.31133,-10 0/0:99:35:35:1259:0:0:0,-10,-10 0/0:99:17:17:627:0:0:0,-5.11751,-10 0/0:99:18:18:637:0:0:0,-5.41854,-10 0/0:99:21:21:747:0:0:0,-6.32163,-10 0/0:80.9721:11:11:394:0:0:0,-3.31133,-10 0/0:74.9516:9:9:334:0:0:0,-2.70927,-10 0/0:99:35:35:1251:0:0:0,-10,-10 0/0:99:22:22:814:0:0:0,-6.62266,-10 0/0:68.931:7:7:240:0:0:0,-2.10721,-10 0/0:99:27:27:967:0:0:0,-8.12781,-10 0/0:65.9207:6:6:228:0:0:0,-1.80618,-10 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:77.9619:10:10:364:0:0:0,-3.0103,-10 0/0:62.9104:5:5:185:0:0:0,-1.50515,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:86.9927:13:13:448:0:0:0,-3.91339,-10 0/0:83.9824:12:12:423:0:0:0,-3.61236,-10 0/0:74.9516:9:9:327:0:0:0,-2.70927,-10 0/0:71.9413:8:8:285:0:0:0,-2.40824,-10 0/0:62.9104:5:5:161:0:0:0,-1.50515,-10 0/0:99:21:21:784:0:0:0,-6.32163,-10 0/0:96.0229:16:16:559:0:0:0,-4.81648,-10 0/0:99:29:29:1057:0:0:0,-8.72987,-10 0/0:83.9824:12:12:455:0:0:0,-3.61236,-10 0/0:59.9001:4:4:152:0:0:0,-1.20412,-10 0/0:99:22:22:818:0:0:0,-6.62266,-10 0/0:83.9824:12:12:433:0:0:0,-3.61236,-10 0/0:86.9927:13:13:480:0:0:0,-3.91339,-10 0/0:84.958:23:22:807:1:16:0,-3.96196,-10 0/0:52.0378:11:10:375:1:16:0,-0.669937,-10 0/0:96.0229:16:16:574:0:0:0,-4.81648,-10 0/0:99:17:17:585:0:0:0,-5.11751,-10 0/1:21.1808:11:8:300:3:113:-9.45282,0,-10 0/0:77.9619:10:10:371:0:0:0,-3.0103,-10 0/0:99:23:23:827:0:0:0,-6.92369,-10 0/0:93.013:15:15:529:0:0:0,-4.51545,-10 0/0:68.931:7:7:254:0:0:0,-2.10721,-10 0/0:80.9721:11:11:405:0:0:0,-3.31133,-10 0/0:56.8898:3:3:108:0:0:0,-0.90309,-10 0/0:56.8898:3:3:113:0:0:0,-0.90309,-10 0/0:99:27:27:977:0:0:0,-8.12781,-10 0/0:99:28:28:1028:0:0:0,-8.42884,-10 0/0:90.0029:14:14:509:0:0:0,-4.21442,-10 0/0:86.9927:13:13:491:0:0:0,-3.91339,-10 0/0:99:18:18:626:0:0:0,-5.41854,-10 0/0:53.8795:2:2:74:0:0:0,-0.60206,-7.03 0/0:99:18:18:611:0:0:0,-5.41854,-10 0/0:90.0029:14:14:492:0:0:0,-4.21442,-10 0/0:59.9001:4:4:143:0:0:0,-1.20412,-10 0/0:83.9824:12:12:428:0:0:0,-3.61236,-10 0/0:68.931:7:7:253:0:0:0,-2.10721,-10 0/0:80.9721:11:11:417:0:0:0,-3.31133,-10 scaffold_226 949644 . G C 68.8989 . AB=0.210526;ABP=30.668;AC=2;AF=0.0108696;AN=184;AO=20;CIGAR=1X;DP=1985;DPB=1985;DPRA=0.797543;EPP=46.4397;EPPR=4.21373;GTI=4;LEN=1;MEANALT=1;MQM=60;MQMR=38.0601;NS=92;NUMALT=1;ODDS=0.0465746;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=733;QR=71902;RO=1965;RPP=46.4397;RPPR=4192.14;RUN=1;SAF=0;SAP=46.4397;SAR=20;SRF=957;SRP=5.8846;SRR=1008;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:21:21:760:0:0:0,-6.32163,-10 0/0:99:19:19:699:0:0:0,-5.71957,-10 0/0:99:24:24:869:0:0:0,-7.22472,-10 0/0:99:19:19:695:0:0:0,-5.71957,-10 0/0:99:19:19:717:0:0:0,-5.71957,-10 0/0:99:15:15:558:0:0:0,-4.51545,-10 0/0:99:26:26:979:0:0:0,-7.82678,-10 0/0:99:26:26:957:0:0:0,-7.82678,-10 0/0:99:17:17:633:0:0:0,-5.11751,-10 0/0:71.4563:4:4:152:0:0:0,-1.20412,-10 0/0:77.4768:6:6:215:0:0:0,-1.80618,-10 0/0:92.527:11:11:409:0:0:0,-3.31133,-10 0/0:74.906:21:20:702:1:38:0,-1.19941,-10 0/0:0.833388:22:19:707:3:105:-6.36486,0,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:99:41:41:1529:0:0:0,-10,-10 0/1:19.7371:16:13:493:3:114:-8.57171,0,-10 0/0:86.5074:9:9:340:0:0:0,-2.70927,-10 0/0:99:24:24:890:0:0:0,-7.22472,-10 0/0:99:42:42:1459:0:0:0,-10,-10 0/0:0.00531307:13:11:380:2:61:-3.7737,0,-10 0/1:68.1757:22:17:641:5:190:-10,0,-10 0/0:99:15:15:552:0:0:0,-4.51545,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:99:25:25:876:0:0:0,-7.52575,-10 0/0:99:26:26:907:0:0:0,-7.82678,-10 0/0:99:15:15:544:0:0:0,-4.51545,-10 0/0:99:14:14:530:0:0:0,-4.21442,-10 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:99:37:37:1319:0:0:0,-10,-10 0/0:99:15:15:546:0:0:0,-4.51545,-10 0/0:99:14:14:495:0:0:0,-4.21442,-10 0/0:5.22606e-13:1:0:0:1:35:-3.5,-0.30103,0 0/0:99:18:18:674:0:0:0,-5.41854,-10 0/0:99:31:31:1168:0:0:0,-9.33193,-10 0/0:80.4871:7:7:256:0:0:0,-2.10721,-10 0/0:99:17:17:615:0:0:0,-5.11751,-10 0/0:72.1076:20:19:671:1:38:0,-0.91957,-10 0/0:99:27:27:967:0:0:0,-8.12781,-10 0/0:77.4768:6:6:227:0:0:0,-1.80618,-10 0/0:99:30:30:1066:0:0:0,-9.0309,-10 0/0:99:19:19:675:0:0:0,-5.71957,-10 0/0:99:25:25:926:0:0:0,-7.52575,-10 0/0:2.19616:24:21:759:3:114:-6.72149,0,-10 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:98.5435:13:13:458:0:0:0,-3.91339,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:92.527:11:11:417:0:0:0,-3.31133,-10 0/0:99:38:38:1417:0:0:0,-10,-10 0/0:99:24:24:899:0:0:0,-7.22472,-10 0/0:99:34:34:1240:0:0:0,-10,-10 0/0:99:15:15:552:0:0:0,-4.51545,-10 0/0:77.4768:6:6:228:0:0:0,-1.80618,-10 0/0:99:46:46:1695:0:0:0,-10,-10 0/0:92.527:11:11:405:0:0:0,-3.31133,-10 0/0:99:20:20:657:0:0:0,-6.0206,-10 0/0:89.5174:10:10:335:0:0:0,-3.0103,-10 0/0:99:22:22:826:0:0:0,-6.62266,-10 0/0:99:17:17:622:0:0:0,-5.11751,-10 0/0:99:38:38:1396:0:0:0,-10,-10 0/0:99:21:21:788:0:0:0,-6.32163,-10 0/0:99:29:29:1062:0:0:0,-8.72987,-10 0/0:99:23:23:868:0:0:0,-6.92369,-10 0/0:99:14:14:524:0:0:0,-4.21442,-10 0/0:69.3201:19:18:668:1:38:0,-0.640816,-10 0/0:99:24:24:886:0:0:0,-7.22472,-10 0/0:99:15:15:522:0:0:0,-4.51545,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:99:16:16:593:0:0:0,-4.81648,-10 0/0:99:30:30:1094:0:0:0,-9.0309,-10 0/0:99:37:37:1380:0:0:0,-10,-10 0/0:99:36:36:1323:0:0:0,-10,-10 0/0:99:18:18:677:0:0:0,-5.41854,-10 0/0:99:38:38:1386:0:0:0,-10,-10 0/0:83.4975:8:8:304:0:0:0,-2.40824,-10 0/0:99:24:24:821:0:0:0,-7.22472,-10 0/0:99:23:23:858:0:0:0,-6.92369,-10 0/0:86.5074:9:9:337:0:0:0,-2.70927,-10 0/0:95.5359:12:12:447:0:0:0,-3.61236,-10 0/0:99:33:33:1182:0:0:0,-9.93399,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:99:18:18:658:0:0:0,-5.41854,-10 0/0:99:21:21:772:0:0:0,-6.32163,-10 0/0:99:34:34:1242:0:0:0,-10,-10 0/0:71.4563:4:4:130:0:0:0,-1.20412,-10 0/0:99:25:25:939:0:0:0,-7.52575,-10 0/0:99:20:20:728:0:0:0,-6.0206,-10 0/0:98.5435:13:13:470:0:0:0,-3.91339,-10 0/0:99:31:31:1119:0:0:0,-9.33193,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:99:17:17:637:0:0:0,-5.11751,-10 scaffold_226 1107191 . T C 3402.72 . AB=0.511494;ABP=3.20998;AC=12;AF=0.0652174;AN=184;AO=129;CIGAR=1X;DP=1691;DPB=1691;DPRA=1.14177;EPP=11.915;EPPR=10.6425;GTI=3;LEN=1;MEANALT=1.09091;MQM=59.7364;MQMR=59.9846;NS=92;NUMALT=1;ODDS=1.67559;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4694;QR=57231;RO=1558;RPP=274.512;RPPR=3291.29;RUN=1;SAF=54;SAP=10.4337;SAR=75;SRF=827;SRP=15.8552;SRR=731;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:52.8158:13:13:449:0:0:0,-3.91339,-10 0/0:34.754:7:7:255:0:0:0,-2.10721,-10 0/0:79.9085:22:22:830:0:0:0,-6.62266,-10 0/0:37.7643:8:8:292:0:0:0,-2.40824,-10 0/0:52.8158:13:13:493:0:0:0,-3.91339,-10 0/0:28.7334:5:5:189:0:0:0,-1.50515,-10 0/0:99:30:30:1050:0:0:0,-9.0309,-10 0/0:70.8776:19:19:698:0:0:0,-5.71957,-10 0/0:61.8467:16:16:557:0:0:0,-4.81648,-10 0/0:28.7334:5:5:180:0:0:0,-1.50515,-10 0/0:25.7231:4:4:151:0:0:0,-1.20412,-10 0/0:55.8261:14:14:520:0:0:0,-4.21442,-10 0/0:99:30:30:1131:0:0:0,-9.0309,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:67.8673:18:18:675:0:0:0,-5.41854,-10 0/0:49.8055:12:12:426:0:0:0,-3.61236,-10 0/0:82.9188:23:23:836:0:0:0,-6.92369,-10 0/0:40.7746:9:9:337:0:0:0,-2.70927,-10 0/0:91.9492:26:26:952:0:0:0,-7.82678,-10 1/1:31.178:29:1:25:28:976:-10,-4.76747,0 0/0:34.754:7:7:244:0:0:0,-2.10721,-10 0/0:91.9492:26:26:960:0:0:0,-7.82678,-10 0/0:49.8055:12:12:444:0:0:0,-3.61236,-10 0/0:85.9286:24:24:891:0:0:0,-7.22472,-10 0/0:79.9085:23:22:765:0:0:0,-6.62266,-10 0/1:99:19:11:408:8:275:-10,0,-10 0/0:58.8364:15:15:547:0:0:0,-4.51545,-10 0/0:34.754:7:7:262:0:0:0,-2.10721,-10 0/0:79.9085:22:22:803:0:0:0,-6.62266,-10 0/0:99:41:41:1532:0:0:0,-10,-10 0/0:37.7643:8:8:302:0:0:0,-2.40824,-10 0/0:43.7849:10:10:378:0:0:0,-3.0103,-10 0/0:55.8261:14:14:503:0:0:0,-4.21442,-10 0/0:34.754:7:7:243:0:0:0,-2.10721,-10 0/0:58.8364:15:15:554:0:0:0,-4.51545,-10 0/0:31.7437:6:6:228:0:0:0,-1.80618,-10 0/0:52.8158:13:13:464:0:0:0,-3.91339,-10 0/1:99:30:14:492:16:602:-10,0,-10 0/0:55.8261:14:14:502:0:0:0,-4.21442,-10 0/0:73.8879:20:20:735:0:0:0,-6.0206,-10 0/0:91.9492:26:26:976:0:0:0,-7.82678,-10 0/0:73.8879:20:20:746:0:0:0,-6.0206,-10 0/0:58.8364:15:15:523:0:0:0,-4.51545,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/1:99:23:10:376:13:468:-10,0,-10 0/0:70.8776:19:19:720:0:0:0,-5.71957,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:58.8364:16:15:561:0:0:0,-4.51545,-10 0/0:49.8055:12:12:455:0:0:0,-3.61236,-10 0/0:99:35:35:1307:0:0:0,-10,-10 0/0:52.8158:13:13:492:0:0:0,-3.91339,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:49.8055:12:12:449:0:0:0,-3.61236,-10 0/0:28.7334:5:5:181:0:0:0,-1.50515,-10 0/0:99:43:43:1535:0:0:0,-10,-10 0/0:46.7952:11:11:398:0:0:0,-3.31133,-10 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:28.7334:5:5:190:0:0:0,-1.50515,-10 0/0:82.9188:23:23:834:0:0:0,-6.92369,-10 0/0:49.8055:12:12:433:0:0:0,-3.61236,-10 0/0:85.9286:24:24:890:0:0:0,-7.22472,-10 0/0:85.9286:24:24:897:0:0:0,-7.22472,-10 0/1:99:37:18:668:18:682:-10,0,-10 0/0:52.8158:13:13:468:0:0:0,-3.91339,-10 0/0:46.7952:11:11:416:0:0:0,-3.31133,-10 0/0:85.9286:24:24:907:0:0:0,-7.22472,-10 0/0:61.8467:16:16:600:0:0:0,-4.81648,-10 0/0:52.8158:13:13:490:0:0:0,-3.91339,-10 0/1:99:42:26:951:16:581:-10,0,-10 1/1:13.2511:11:0:0:11:393:-10,-3.31133,0 0/0:58.8364:15:15:570:0:0:0,-4.51545,-10 0/0:99:36:36:1328:0:0:0,-10,-10 0/0:76.8982:21:21:786:0:0:0,-6.32163,-10 0/0:64.857:17:17:636:0:0:0,-5.11751,-10 0/0:73.8879:21:20:747:0:0:0,-6.0206,-10 0/1:0.0186972:4:0:0:4:152:-10,-1.20412,0 0/0:0.683704:13:12:456:1:38:-1.00055,0,-10 0/0:46.7952:11:11:407:0:0:0,-3.31133,-10 0/0:34.754:7:7:260:0:0:0,-2.10721,-10 0/0:61.8467:16:16:563:0:0:0,-4.81648,-10 0/0:99:35:35:1296:0:0:0,-10,-10 0/0:99:29:29:1043:0:0:0,-8.72987,-10 0/0:94.959:27:27:996:0:0:0,-8.12781,-10 0/0:97.9682:28:28:1045:0:0:0,-8.42884,-10 0/1:99:16:5:187:11:413:-10,0,-10 0/1:0.00933855:3:0:0:3:114:-10,-0.90309,0 0/0:64.857:17:17:617:0:0:0,-5.11751,-10 0/0:67.8673:18:18:684:0:0:0,-5.41854,-10 0/0:19.7025:2:2:76:0:0:0,-0.60206,-7.22 0/0:73.8879:20:20:726:0:0:0,-6.0206,-10 0/0:67.8673:18:18:651:0:0:0,-5.41854,-10 0/0:58.8364:15:15:520:0:0:0,-4.51545,-10 scaffold_226 1138191 . G A 8201.04 . AB=0.487719;ABP=3.38364;AC=50;AF=0.280899;AN=178;AO=301;CIGAR=1X;DP=1030;DPB=1030;DPRA=1.18295;EPP=10.8666;EPPR=5.18177;GTI=2;LEN=1;MEANALT=1;MQM=59.9967;MQMR=59.9204;NS=89;NUMALT=1;ODDS=0.00784415;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10990;QR=26856;RO=729;RPP=630.826;RPPR=1517.29;RUN=1;SAF=164;SAP=8.26945;SAR=137;SRF=370;SRP=3.37072;SRR=359;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:39.5643:11:11:389:0:0:0,-3.31133,-10 0/0:21.5025:5:5:190:0:0:0,-1.50515,-10 0/1:99:13:6:226:7:264:-10,0,-10 0/0:27.5231:7:7:266:0:0:0,-2.10721,-10 0/1:99:8:3:114:5:168:-10,0,-9.97995 1/1:17.4924:8:0:0:8:303:-10,-2.40824,0 0/1:99:22:11:407:11:395:-10,0,-10 0/1:99:17:10:356:7:261:-10,0,-10 0/0:36.554:10:10:376:0:0:0,-3.0103,-10 .:.:.:.:.:.:.:. 0/0:30.5334:8:8:284:0:0:0,-2.40824,-10 0/0:15.4819:3:3:101:0:0:0,-0.90309,-9.42667 0/0:39.5643:11:11:417:0:0:0,-3.31133,-10 0/0:66.657:20:20:744:0:0:0,-6.0206,-10 0/0:48.5952:14:14:532:0:0:0,-4.21442,-10 0/1:99:12:6:225:6:228:-10,0,-10 0/0:45.5849:13:13:494:0:0:0,-3.91339,-10 0/0:15.4819:3:3:107:0:0:0,-0.90309,-9.98667 0/0:48.5952:14:14:508:0:0:0,-4.21442,-10 0/1:99:20:11:417:9:315:-10,0,-10 0/1:99:17:6:228:11:416:-10,0,-10 0/1:99:24:13:485:11:394:-10,0,-10 0/0:24.5128:6:6:225:0:0:0,-1.80618,-10 0/0:42.5746:12:12:450:0:0:0,-3.61236,-10 0/0:33.5437:9:9:320:0:0:0,-2.70927,-10 0/0:36.554:10:10:380:0:0:0,-3.0103,-10 0/0:33.5437:9:9:316:0:0:0,-2.70927,-10 0/0:33.5437:9:9:333:0:0:0,-2.70927,-10 0/0:36.554:10:10:360:0:0:0,-3.0103,-10 0/0:57.6261:17:17:636:0:0:0,-5.11751,-10 .:.:.:.:.:.:.:. 0/0:30.5334:8:8:304:0:0:0,-2.40824,-10 0/0:42.5746:12:12:426:0:0:0,-3.61236,-10 0/1:1.0131:5:0:0:5:190:-10,-1.50515,0 0/0:45.5849:13:13:479:0:0:0,-3.91339,-10 0/1:0.0568463:1:0:0:1:16:-1.6,-0.30103,0 1/1:17.4924:8:0:0:8:280:-10,-2.40824,0 0/0:51.6055:15:15:570:0:0:0,-4.51545,-10 0/0:30.5334:8:8:285:0:0:0,-2.40824,-10 0/0:42.5746:12:12:456:0:0:0,-3.61236,-10 0/0:48.5952:14:14:512:0:0:0,-4.21442,-10 1/1:14.4821:7:0:0:7:251:-10,-2.10721,0 0/0:39.5643:11:11:405:0:0:0,-3.31133,-10 0/0:54.6158:16:16:595:0:0:0,-4.81648,-10 0/0:51.6055:15:15:561:0:0:0,-4.51545,-10 0/1:60.1351:11:9:333:2:76:-5.64903,0,-10 0/1:99:20:12:439:8:298:-10,0,-10 0/1:99:11:5:177:6:215:-10,0,-10 1/1:32.5439:13:0:0:13:488:-10,-3.91339,0 0/0:54.6158:16:16:579:0:0:0,-4.81648,-10 0/0:30.5334:8:8:269:0:0:0,-2.40824,-10 0/0:75.6879:23:23:815:0:0:0,-6.92369,-10 0/0:18.4922:4:4:148:0:0:0,-1.20412,-10 .:.:.:.:.:.:.:. 0/0:63.6467:19:19:702:0:0:0,-5.71957,-10 0/0:27.5231:7:7:257:0:0:0,-2.10721,-10 0/1:99:16:5:179:11:403:-10,0,-10 0/0:18.4922:4:4:148:0:0:0,-1.20412,-10 1/1:23.513:10:0:0:10:340:-10,-3.0103,0 0/0:15.4819:3:3:105:0:0:0,-0.90309,-9.8 0/0:54.6158:16:16:547:0:0:0,-4.81648,-10 0/0:54.6158:16:16:605:0:0:0,-4.81648,-10 0/0:63.6467:19:19:689:0:0:0,-5.71957,-10 0/1:99:9:4:152:5:186:-10,0,-10 0/0:36.554:10:10:358:0:0:0,-3.0103,-10 0/1:99:11:3:114:8:298:-10,0,-9.54615 0/0:39.5643:11:11:418:0:0:0,-3.31133,-10 0/0:33.5437:9:9:342:0:0:0,-2.70927,-10 0/0:51.6055:15:15:542:0:0:0,-4.51545,-10 0/0:21.5025:5:5:190:0:0:0,-1.50515,-10 1/1:17.4924:8:0:0:8:302:-10,-2.40824,0 1/1:53.616:20:0:0:20:732:-10,-6.0206,0 1/1:38.5645:15:0:0:15:558:-10,-4.51545,0 1/1:26.5233:11:0:0:11:418:-10,-3.31133,0 1/1:47.5954:18:0:0:18:622:-10,-5.41854,0 0/1:19.6252:9:8:276:1:33:-1.54497,0,-10 1/1:29.5336:12:0:0:12:420:-10,-3.61236,0 0/0:30.5334:8:8:301:0:0:0,-2.40824,-10 1/1:8.46146:5:0:0:5:190:-10,-1.50515,0 1/1:14.4821:7:0:0:7:266:-10,-2.10721,0 0/1:99:27:20:754:7:252:-10,0,-10 0/1:99:13:5:190:8:303:-10,0,-10 0/1:99:19:9:327:10:378:-10,0,-10 1/1:23.513:10:0:0:10:374:-10,-3.0103,0 0/0:66.657:20:20:743:0:0:0,-6.0206,-10 0/0:33.5437:9:9:342:0:0:0,-2.70927,-10 0/0:30.5334:8:8:299:0:0:0,-2.40824,-10 1/1:23.513:10:0:0:10:357:-10,-3.0103,0 0/0:9.4612:1:1:38:0:0:0,-0.30103,-3.8 0/0:33.5437:9:9:338:0:0:0,-2.70927,-10 0/0:42.5746:12:12:438:0:0:0,-3.61236,-10 0/0:24.5128:6:6:223:0:0:0,-1.80618,-10 scaffold_227 318827 . A G 275.71 . AB=0.5;ABP=3.0103;AC=2;AF=0.0108696;AN=184;AO=14;CIGAR=1X;DP=1313;DPB=1313;DPRA=0.980545;EPP=3.63072;EPPR=7.7132;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9599;NS=92;NUMALT=1;ODDS=8.0764;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=481;QR=47535;RO=1297;RPP=33.4109;RPPR=2819.41;RUN=1;SAF=6;SAP=3.63072;SAR=8;SRF=622;SRP=7.7132;SRR=675;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.1333:7:7:236:0:0:0,-2.10721,-10 0/0:53.1436:8:8:299:0:0:0,-2.40824,-10 0/0:68.1951:13:13:468:0:0:0,-3.91339,-10 0/0:59.1642:10:10:361:0:0:0,-3.0103,-10 0/0:53.1436:8:8:304:0:0:0,-2.40824,-10 0/0:56.1539:9:9:342:0:0:0,-2.70927,-10 0/0:99:27:26:967:0:0:0,-7.82678,-10 0/0:65.1848:12:12:452:0:0:0,-3.61236,-10 0/0:68.1951:13:13:456:0:0:0,-3.91339,-10 0/0:38.0921:3:3:114:0:0:0,-0.90309,-10 0/0:35.0818:2:2:76:0:0:0,-0.60206,-7.22 0/0:50.1333:7:7:266:0:0:0,-2.10721,-10 0/0:92.2771:21:21:796:0:0:0,-6.32163,-10 0/0:99:26:26:976:0:0:0,-7.82678,-10 0/0:99:26:26:952:0:0:0,-7.82678,-10 0/0:86.2568:19:19:708:0:0:0,-5.71957,-10 0/0:68.1951:13:13:465:0:0:0,-3.91339,-10 0/0:62.1745:11:11:409:0:0:0,-3.31133,-10 0/0:77.226:16:16:600:0:0:0,-4.81648,-10 0/0:95.2871:22:22:808:0:0:0,-6.62266,-10 0/0:65.1848:12:12:451:0:0:0,-3.61236,-10 0/0:92.2771:21:21:767:0:0:0,-6.32163,-10 0/0:50.1333:7:7:211:0:0:0,-2.10721,-10 0/0:86.2568:19:19:701:0:0:0,-5.71957,-10 0/0:59.1642:10:10:351:0:0:0,-3.0103,-10 0/0:95.2871:22:22:772:0:0:0,-6.62266,-10 0/0:65.1848:12:12:456:0:0:0,-3.61236,-10 0/0:53.1436:8:8:304:0:0:0,-2.40824,-10 0/0:71.2054:14:14:503:0:0:0,-4.21442,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:38.0921:3:3:114:0:0:0,-0.90309,-10 0/0:50.1333:7:7:264:0:0:0,-2.10721,-10 0/0:74.2157:15:15:545:0:0:0,-4.51545,-10 0/0:44.1127:5:5:189:0:0:0,-1.50515,-10 0/0:89.267:20:20:748:0:0:0,-6.0206,-10 0/0:44.1127:5:5:179:0:0:0,-1.50515,-10 0/0:80.2363:17:17:642:0:0:0,-5.11751,-10 0/0:86.2568:19:19:695:0:0:0,-5.71957,-10 0/0:50.1333:7:7:263:0:0:0,-2.10721,-10 0/0:62.1745:11:11:410:0:0:0,-3.31133,-10 0/0:92.2771:21:21:758:0:0:0,-6.32163,-10 0/0:83.2466:19:18:648:0:0:0,-5.41854,-10 0/0:80.2363:17:17:645:0:0:0,-5.11751,-10 0/0:62.1745:11:11:416:0:0:0,-3.31133,-10 0/0:74.2157:15:15:547:0:0:0,-4.51545,-10 0/0:77.226:16:16:602:0:0:0,-4.81648,-10 0/0:99:28:28:1041:0:0:0,-8.42884,-10 0/0:62.1745:11:11:414:0:0:0,-3.31133,-10 0/0:53.1436:8:8:278:0:0:0,-2.40824,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:38.0921:3:3:112:0:0:0,-0.90309,-10 0/0:86.2568:19:19:678:0:0:0,-5.71957,-10 0/0:62.1745:11:11:396:0:0:0,-3.31133,-10 0/0:44.1127:5:5:167:0:0:0,-1.50515,-10 0/0:99:40:40:1466:0:0:0,-10,-10 0/0:59.1642:10:10:367:0:0:0,-3.0103,-10 0/0:62.1745:11:11:415:0:0:0,-3.31133,-10 0/0:47.123:6:6:195:0:0:0,-1.80618,-10 0/0:74.2157:15:15:563:0:0:0,-4.51545,-10 0/0:68.1951:13:13:488:0:0:0,-3.91339,-10 0/0:99:25:25:903:0:0:0,-7.52575,-10 0/0:71.2054:14:14:508:0:0:0,-4.21442,-10 0/0:95.2871:22:22:788:0:0:0,-6.62266,-10 0/0:86.2568:19:19:665:0:0:0,-5.71957,-10 0/0:56.1539:9:9:337:0:0:0,-2.70927,-10 0/0:99:25:25:922:0:0:0,-7.52575,-10 0/0:77.226:16:16:597:0:0:0,-4.81648,-10 0/0:56.1539:9:9:342:0:0:0,-2.70927,-10 0/0:86.2568:19:19:711:0:0:0,-5.71957,-10 0/0:53.1436:8:8:301:0:0:0,-2.40824,-10 0/0:92.2771:21:21:737:0:0:0,-6.32163,-10 0/0:89.267:20:20:708:0:0:0,-6.0206,-10 0/0:92.2771:21:21:796:0:0:0,-6.32163,-10 0/1:3.14226e-06:6:0:0:6:223:-10,-1.80618,0 0/1:99:22:14:524:8:258:-10,0,-10 0/0:62.1745:11:11:387:0:0:0,-3.31133,-10 0/0:59.1642:10:10:372:0:0:0,-3.0103,-10 0/0:62.1745:11:11:418:0:0:0,-3.31133,-10 0/0:35.0818:2:2:76:0:0:0,-0.60206,-7.22 0/0:68.1951:13:13:471:0:0:0,-3.91339,-10 0/0:99:26:26:954:0:0:0,-7.82678,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:92.2771:21:21:759:0:0:0,-6.32163,-10 0/0:56.1539:9:9:341:0:0:0,-2.70927,-10 0/0:62.1745:11:11:404:0:0:0,-3.31133,-10 0/0:56.1539:9:9:328:0:0:0,-2.70927,-10 0/0:59.1642:10:10:367:0:0:0,-3.0103,-10 0/0:74.2157:15:15:556:0:0:0,-4.51545,-10 0/0:38.0921:3:3:114:0:0:0,-0.90309,-10 0/0:86.2568:19:19:670:0:0:0,-5.71957,-10 0/0:56.1539:9:9:310:0:0:0,-2.70927,-10 0/0:68.1951:13:13:454:0:0:0,-3.91339,-10 scaffold_227 738592 . C T 1285 . AB=0.576471;ABP=7.3277;AC=3;AF=0.0163043;AN=184;AO=51;CIGAR=1X;DP=1785;DPB=1785;DPRA=1.43505;EPP=4.07475;EPPR=8.47789;GTI=0;LEN=1;MEANALT=1.2;MQM=59.4314;MQMR=59.9422;NS=92;NUMALT=1;ODDS=1.6953;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1829;QR=63293;RO=1730;RPP=113.755;RPPR=3537.22;RUN=1;SAF=23;SAP=4.07475;SAR=28;SRF=848;SRP=4.4613;SRR=882;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:63.7995:20:20:753:0:0:0,-6.0206,-10 0/0:18.645:5:5:184:0:0:0,-1.50515,-10 0/0:72.8304:23:23:850:0:0:0,-6.92369,-10 0/0:39.7171:12:12:453:0:0:0,-3.61236,-10 0/0:42.7274:13:13:489:0:0:0,-3.91339,-10 0/0:27.6759:8:8:301:0:0:0,-2.40824,-10 0/0:90.8911:29:29:1083:0:0:0,-8.72987,-10 0/0:57.7789:18:18:659:0:0:0,-5.41854,-10 0/0:21.6553:6:6:227:0:0:0,-1.80618,-10 0/0:30.6862:9:9:340:0:0:0,-2.70927,-10 0/0:21.6553:6:6:227:0:0:0,-1.80618,-10 0/0:27.6759:8:8:289:0:0:0,-2.40824,-10 0/0:78.851:25:25:874:0:0:0,-7.52575,-10 0/0:99:35:35:1291:0:0:0,-10,-10 0/0:75.8407:24:24:848:0:0:0,-7.22472,-10 0/0:57.7789:18:18:648:0:0:0,-5.41854,-10 0/0:60.7892:19:19:706:0:0:0,-5.71957,-10 0/0:27.6759:9:8:278:0:0:0,-2.40824,-10 0/0:87.8814:28:28:1032:0:0:0,-8.42884,-10 0/1:99:46:19:709:27:951:-10,0,-10 0/1:99:21:9:340:12:446:-10,0,-10 0/0:93.9028:30:30:1112:0:0:0,-9.0309,-10 0/0:30.6862:9:9:342:0:0:0,-2.70927,-10 0/0:66.8098:21:21:780:0:0:0,-6.32163,-10 0/0:66.8098:21:21:788:0:0:0,-6.32163,-10 0/0:69.8201:22:22:741:0:0:0,-6.62266,-10 0/0:60.7892:19:19:720:0:0:0,-5.71957,-10 0/0:48.748:15:15:500:0:0:0,-4.51545,-10 0/0:69.8201:22:22:822:0:0:0,-6.62266,-10 0/0:87.8814:28:28:1002:0:0:0,-8.42884,-10 0/0:9.6141:2:2:76:0:0:0,-0.60206,-7.22 0/0:42.7274:13:13:485:0:0:0,-3.91339,-10 0/0:54.7686:17:17:607:0:0:0,-5.11751,-10 0/0:48.748:15:15:554:0:0:0,-4.51545,-10 0/0:57.7789:18:18:663:0:0:0,-5.41854,-10 0/0:24.6656:7:7:239:0:0:0,-2.10721,-10 0/0:39.7171:12:12:425:0:0:0,-3.61236,-10 0/0:99:35:35:1246:0:0:0,-10,-10 0/0:69.8201:22:22:794:0:0:0,-6.62266,-10 0/0:54.7686:17:17:642:0:0:0,-5.11751,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:57.7789:18:18:668:0:0:0,-5.41854,-10 0/0:84.8713:27:27:960:0:0:0,-8.12781,-10 0/0:81.8612:26:26:947:0:0:0,-7.82678,-10 0/1:99:18:8:282:10:378:-10,0,-10 0/0:45.7377:14:14:507:0:0:0,-4.21442,-10 0/0:99:42:42:1486:0:0:0,-10,-10 0/0:69.8201:22:22:834:0:0:0,-6.62266,-10 0/0:24.6656:7:7:241:0:0:0,-2.10721,-10 0/0:99:37:37:1340:0:0:0,-10,-10 0/0:48.748:15:15:568:0:0:0,-4.51545,-10 0/0:99:46:46:1714:0:0:0,-10,-10 0/0:45.7377:14:14:521:0:0:0,-4.21442,-10 0/0:12.6244:3:3:114:0:0:0,-0.90309,-10 0/0:99:52:52:1880:0:0:0,-10,-10 0/0:18.645:5:5:190:0:0:0,-1.50515,-10 0/0:20.5469:21:19:686:1:38:0,-1.18457,-10 0/0:9.6141:2:2:53:0:0:0,-0.60206,-5.035 0/0:60.7892:19:19:710:0:0:0,-5.71957,-10 0/0:33.6965:10:10:352:0:0:0,-3.0103,-10 0/0:84.8713:27:27:1018:0:0:0,-8.12781,-10 0/0:81.8612:27:26:979:0:0:0,-7.82678,-10 0/0:99:43:43:1557:0:0:0,-10,-10 0/0:45.7377:14:14:464:0:0:0,-4.21442,-10 0/0:36.7068:11:11:376:0:0:0,-3.31133,-10 0/0:66.5304:30:29:1057:1:16:0,-5.95378,-10 0/0:45.7377:15:14:508:0:0:0,-4.21442,-10 0/0:36.7068:11:11:401:0:0:0,-3.31133,-10 0/0:99:37:37:1341:0:0:0,-10,-10 0/0:45.7377:14:14:522:0:0:0,-4.21442,-10 0/0:72.8304:23:23:795:0:0:0,-6.92369,-10 0/0:87.8814:28:28:1062:0:0:0,-8.42884,-10 0/0:75.8407:24:24:889:0:0:0,-7.22472,-10 0/0:48.748:15:15:559:0:0:0,-4.51545,-10 0/0:60.7892:19:19:699:0:0:0,-5.71957,-10 0/0:48.748:15:15:545:0:0:0,-4.51545,-10 0/0:42.7274:13:13:490:0:0:0,-3.91339,-10 0/0:30.6862:9:9:335:0:0:0,-2.70927,-10 0/0:36.7068:11:11:402:0:0:0,-3.31133,-10 0/0:33.6965:10:10:364:0:0:0,-3.0103,-10 0/0:99:47:47:1772:0:0:0,-10,-10 0/0:78.851:25:25:928:0:0:0,-7.52575,-10 0/0:78.851:25:25:891:0:0:0,-7.52575,-10 0/0:75.8407:24:24:892:0:0:0,-7.22472,-10 0/0:72.8304:23:23:866:0:0:0,-6.92369,-10 0/0:21.6553:6:6:228:0:0:0,-1.80618,-10 0/0:63.7995:20:20:721:0:0:0,-6.0206,-10 0/0:60.7892:19:19:699:0:0:0,-5.71957,-10 0/0:12.6244:3:3:114:0:0:0,-0.90309,-10 0/0:57.7789:18:18:642:0:0:0,-5.41854,-10 0/0:24.6656:7:7:266:0:0:0,-2.10721,-10 0/0:48.748:15:15:566:0:0:0,-4.51545,-10 scaffold_227 738602 . C G 1744.17 . AB=0.615385;ABP=10.5269;AC=5;AF=0.0271739;AN=184;AO=67;CIGAR=1X;DP=1784;DPB=1784;DPRA=1.59684;EPP=3.04271;EPPR=4.2285;GTI=1;LEN=1;MEANALT=1;MQM=59.5672;MQMR=59.934;NS=92;NUMALT=1;ODDS=0.332695;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2426;QR=61748;RO=1713;RPP=148.499;RPPR=3679.44;RUN=1;SAF=34;SAP=3.04271;SAR=33;SRF=836;SRP=5.14121;SRR=877;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:68.1355:20:20:740:0:0:0,-6.0206,-10 0/0:22.981:5:5:189:0:0:0,-1.50515,-10 0/0:77.1664:23:23:835:0:0:0,-6.92369,-10 0/0:44.0531:12:12:442:0:0:0,-3.61236,-10 0/0:47.0634:13:13:492:0:0:0,-3.91339,-10 0/0:32.0119:8:8:304:0:0:0,-2.40824,-10 0/0:95.2259:29:29:1060:0:0:0,-8.72987,-10 0/0:62.1149:18:18:683:0:0:0,-5.41854,-10 0/0:25.9913:6:6:221:0:0:0,-1.80618,-10 0/0:35.0222:9:9:341:0:0:0,-2.70927,-10 0/0:25.9913:6:6:223:0:0:0,-1.80618,-10 0/0:32.0119:8:8:304:0:0:0,-2.40824,-10 0/0:83.1869:25:25:906:0:0:0,-7.52575,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:80.1767:24:24:883:0:0:0,-7.22472,-10 0/0:62.1149:18:18:612:0:0:0,-5.41854,-10 0/0:65.1252:19:19:715:0:0:0,-5.71957,-10 0/0:35.0222:9:9:307:0:0:0,-2.70927,-10 0/1:99:28:12:432:16:594:-10,0,-10 0/0:99:46:46:1663:0:0:0,-10,-10 0/0:71.1458:21:21:762:0:0:0,-6.32163,-10 0/0:98.2404:30:30:1071:0:0:0,-9.0309,-10 0/0:35.0222:9:9:333:0:0:0,-2.70927,-10 0/0:71.1458:21:21:782:0:0:0,-6.32163,-10 0/0:71.1458:21:21:757:0:0:0,-6.32163,-10 0/0:74.1561:22:22:774:0:0:0,-6.62266,-10 0/0:65.1252:19:19:715:0:0:0,-5.71957,-10 0/0:53.084:15:15:494:0:0:0,-4.51545,-10 0/0:74.1561:22:22:808:0:0:0,-6.62266,-10 0/0:92.2168:28:28:1036:0:0:0,-8.42884,-10 0/1:2.03174:2:2:76:0:0:0,-0.60206,-7.22 0/0:47.0634:13:13:455:0:0:0,-3.91339,-10 0/0:59.1046:17:17:594:0:0:0,-5.11751,-10 0/0:53.084:15:15:515:0:0:0,-4.51545,-10 0/0:62.1149:18:18:652:0:0:0,-5.41854,-10 0/0:29.0016:7:7:264:0:0:0,-2.10721,-10 0/0:44.0531:12:12:393:0:0:0,-3.61236,-10 0/0:99:35:35:1267:0:0:0,-10,-10 0/0:71.1458:22:21:707:0:0:0,-6.32163,-10 0/0:59.1046:17:17:628:0:0:0,-5.11751,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:62.1149:18:18:679:0:0:0,-5.41854,-10 0/0:89.207:27:27:989:0:0:0,-8.12781,-10 0/0:86.197:26:26:954:0:0:0,-7.82678,-10 0/0:59.1046:18:17:609:0:0:0,-5.11751,-10 0/0:50.0737:14:14:489:0:0:0,-4.21442,-10 0/0:99:42:42:1477:0:0:0,-10,-10 0/0:74.1561:22:22:820:0:0:0,-6.62266,-10 0/0:29.0016:7:7:257:0:0:0,-2.10721,-10 0/0:99:37:36:1226:0:0:0,-10,-10 0/0:53.084:15:15:570:0:0:0,-4.51545,-10 0/0:99:46:46:1667:0:0:0,-10,-10 0/0:50.0737:14:14:476:0:0:0,-4.21442,-10 0/0:16.9604:3:3:98:0:0:0,-0.90309,-9.14667 0/0:99:52:52:1854:0:0:0,-10,-10 0/0:22.981:5:5:189:0:0:0,-1.50515,-10 0/0:71.1458:21:21:732:0:0:0,-6.32163,-10 0/0:13.9501:2:2:62:0:0:0,-0.60206,-5.89 0/0:65.1252:19:19:705:0:0:0,-5.71957,-10 0/0:38.0325:10:10:356:0:0:0,-3.0103,-10 0/0:89.207:27:27:948:0:0:0,-8.12781,-10 1/1:47.2618:27:0:0:27:995:-10,-8.12781,0 0/0:99:43:43:1551:0:0:0,-10,-10 0/0:50.0737:14:14:443:0:0:0,-4.21442,-10 0/0:41.0428:11:11:349:0:0:0,-3.31133,-10 0/0:98.2404:30:30:1059:0:0:0,-9.0309,-10 0/0:53.084:15:15:565:0:0:0,-4.51545,-10 0/0:41.0428:11:11:386:0:0:0,-3.31133,-10 0/1:99:37:13:489:24:837:-10,0,-10 0/0:50.0737:14:14:491:0:0:0,-4.21442,-10 0/0:77.1664:23:23:805:0:0:0,-6.92369,-10 0/0:92.2168:28:28:1026:0:0:0,-8.42884,-10 0/0:80.1767:24:24:880:0:0:0,-7.22472,-10 0/0:53.084:15:15:554:0:0:0,-4.51545,-10 0/0:65.1252:19:19:696:0:0:0,-5.71957,-10 0/0:53.084:15:15:508:0:0:0,-4.51545,-10 0/0:47.0634:13:13:469:0:0:0,-3.91339,-10 0/0:35.0222:9:9:319:0:0:0,-2.70927,-10 0/0:41.0428:11:11:391:0:0:0,-3.31133,-10 0/0:38.0325:10:10:360:0:0:0,-3.0103,-10 0/0:99:47:46:1702:0:0:0,-10,-10 0/0:83.1869:25:25:923:0:0:0,-7.52575,-10 0/0:83.1869:25:25:856:0:0:0,-7.52575,-10 0/0:80.1767:24:24:855:0:0:0,-7.22472,-10 0/0:77.1664:23:23:846:0:0:0,-6.92369,-10 0/0:25.9913:6:6:228:0:0:0,-1.80618,-10 0/0:68.1355:20:20:750:0:0:0,-6.0206,-10 0/0:62.1149:18:18:617:0:0:0,-5.41854,-10 0/0:16.9604:3:3:114:0:0:0,-0.90309,-10 0/0:62.1149:18:18:644:0:0:0,-5.41854,-10 0/0:29.0016:7:7:266:0:0:0,-2.10721,-10 0/0:53.084:15:15:546:0:0:0,-4.51545,-10 scaffold_227 791415 . T C 6162.4 . AB=0.537037;ABP=4.9405;AC=21;AF=0.11413;AN=184;AO=228;CIGAR=1X;DP=1794;DPB=1794;DPRA=1.24865;EPP=4.877;EPPR=3.56566;GTI=2;LEN=1;MEANALT=1;MQM=59.9254;MQMR=59.9994;NS=92;NUMALT=1;ODDS=1.49781;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8237;QR=56999;RO=1564;RPP=480.887;RPPR=3381.84;RUN=1;SAF=119;SAP=3.9627;SAR=109;SRF=794;SRP=3.81002;SRR=770;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.5649:13:13:483:0:0:0,-3.91339,-10 0/0:32.5237:9:9:341:0:0:0,-2.70927,-10 0/0:86.7087:27:27:1014:0:0:0,-8.12781,-10 0/0:41.5546:12:12:438:0:0:0,-3.61236,-10 0/0:26.5031:7:7:262:0:0:0,-2.10721,-10 0/0:41.5546:12:12:449:0:0:0,-3.61236,-10 0/0:99:43:43:1598:0:0:0,-10,-10 0/0:65.637:20:20:703:0:0:0,-6.0206,-10 1/1:16.4861:15:0:0:15:510:-10,-4.51545,0 0/0:14.4619:3:3:114:0:0:0,-0.90309,-10 0/0:14.4619:3:3:112:0:0:0,-0.90309,-10 0/1:0.0144056:6:0:0:6:223:-10,-1.80618,0 0/0:98.7434:31:31:1108:0:0:0,-9.33193,-10 0/1:99:30:16:606:14:483:-10,0,-10 0/1:99:32:16:576:16:569:-10,0,-10 0/1:99:26:13:492:13:486:-10,0,-10 0/0:80.6884:25:25:907:0:0:0,-7.52575,-10 0/0:68.6473:21:21:775:0:0:0,-6.32163,-10 0/0:53.5958:16:16:593:0:0:0,-4.81648,-10 0/0:99:44:44:1579:0:0:0,-10,-10 0/0:86.7087:27:27:997:0:0:0,-8.12781,-10 0/0:92.7299:29:29:1074:0:0:0,-8.72987,-10 0/0:29.5134:8:8:302:0:0:0,-2.40824,-10 0/0:74.6679:23:23:846:0:0:0,-6.92369,-10 0/0:62.6267:19:19:693:0:0:0,-5.71957,-10 0/0:83.6986:26:26:954:0:0:0,-7.82678,-10 0/0:71.6576:22:22:791:0:0:0,-6.62266,-10 0/0:32.5237:9:9:340:0:0:0,-2.70927,-10 1/1:34.5479:21:0:0:21:773:-10,-6.32163,0 0/0:89.7186:28:28:1014:0:0:0,-8.42884,-10 0/1:0.00179808:3:0:0:3:114:-10,-0.90309,0 0/0:8.44135:1:1:38:0:0:0,-0.30103,-3.8 0/0:53.5958:16:16:580:0:0:0,-4.81648,-10 0/0:41.5546:12:12:421:0:0:0,-3.61236,-10 0/0:68.6473:21:21:758:0:0:0,-6.32163,-10 0/0:29.5134:8:8:290:0:0:0,-2.40824,-10 0/0:17.4722:4:4:150:0:0:0,-1.20412,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:56.6061:17:17:640:0:0:0,-5.11751,-10 0/0:35.534:10:10:378:0:0:0,-3.0103,-10 0/0:86.7087:27:27:998:0:0:0,-8.12781,-10 0/0:77.6782:24:24:876:0:0:0,-7.22472,-10 0/0:68.6473:21:21:745:0:0:0,-6.32163,-10 0/1:99:35:18:663:17:607:-10,0,-10 0/0:65.637:20:20:712:0:0:0,-6.0206,-10 0/0:59.6164:18:18:673:0:0:0,-5.41854,-10 0/0:99:52:52:1878:0:0:0,-10,-10 0/0:98.7434:31:31:1133:0:0:0,-9.33193,-10 0/0:41.5546:12:12:429:0:0:0,-3.61236,-10 0/0:71.6576:22:22:756:0:0:0,-6.62266,-10 0/0:26.5031:7:7:262:0:0:0,-2.10721,-10 0/0:99:34:33:1214:0:0:0,-9.93399,-10 0/0:44.5649:13:13:494:0:0:0,-3.91339,-10 0/0:17.4722:4:4:149:0:0:0,-1.20412,-10 0/0:99:49:48:1702:1:38:0,-9.26027,-10 0/0:38.5443:11:11:397:0:0:0,-3.31133,-10 0/0:41.5546:12:12:456:0:0:0,-3.61236,-10 1/1:16.4861:15:0:0:15:553:-10,-4.51545,0 0/0:62.6267:19:19:663:0:0:0,-5.71957,-10 1/1:25.517:18:0:0:18:668:-10,-5.41854,0 0/0:99:34:34:1196:0:0:0,-10,-10 0/0:74.6679:23:23:822:0:0:0,-6.92369,-10 0/0:99:42:42:1531:0:0:0,-10,-10 0/0:59.6164:18:18:636:0:0:0,-5.41854,-10 0/0:29.5134:8:8:303:0:0:0,-2.40824,-10 1/1:79.7024:36:0:0:36:1294:-10,-10,0 1/1:31.5376:20:0:0:20:729:-10,-6.0206,0 0/0:44.5649:13:13:489:0:0:0,-3.91339,-10 0/0:71.6576:22:22:780:0:0:0,-6.62266,-10 0/0:56.6061:17:17:626:0:0:0,-5.11751,-10 0/0:71.6576:22:22:810:0:0:0,-6.62266,-10 0/0:98.7434:31:31:1142:0:0:0,-9.33193,-10 0/0:59.6164:18:18:676:0:0:0,-5.41854,-10 0/0:23.4928:6:6:215:0:0:0,-1.80618,-10 0/0:98.7434:31:31:1115:0:0:0,-9.33193,-10 0/0:29.5134:8:8:278:0:0:0,-2.40824,-10 1/1:16.4861:15:0:0:15:542:-10,-4.51545,0 0/0:32.5237:9:9:308:0:0:0,-2.70927,-10 0/0:20.4825:5:5:189:0:0:0,-1.50515,-10 0/0:35.534:11:10:379:0:0:0,-3.0103,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:53.5958:16:16:604:0:0:0,-4.81648,-10 0/0:59.6164:18:18:648:0:0:0,-5.41854,-10 0/0:77.6782:24:24:856:0:0:0,-7.22472,-10 0/0:50.5855:15:15:562:0:0:0,-4.51545,-10 0/0:23.4928:6:6:225:0:0:0,-1.80618,-10 0/0:56.6061:17:17:612:0:0:0,-5.11751,-10 0/0:44.5649:13:13:477:0:0:0,-3.91339,-10 0/0:23.4928:6:6:217:0:0:0,-1.80618,-10 0/0:92.7299:29:29:1065:0:0:0,-8.72987,-10 0/1:99:30:12:414:18:648:-10,0,-10 0/0:71.6576:22:22:805:0:0:0,-6.62266,-10 scaffold_227 1038019 . A G 1479.83 . AB=0.655172;ABP=9.07545;AC=5;AF=0.0271739;AN=184;AO=57;CIGAR=1X;DP=1547;DPB=1547;DPRA=1.34302;EPP=3.0484;EPPR=3.85087;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=0.275027;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2129;QR=55172;RO=1488;RPP=126.784;RPPR=3165.05;RUN=1;SAF=28;SAP=3.0484;SAR=29;SRF=724;SRP=5.34522;SRR=764;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:29.3949:9:9:334:0:0:0,-2.70927,-10 0/0:26.3846:8:8:289:0:0:0,-2.40824,-10 0/0:29.3949:9:9:315:0:0:0,-2.70927,-10 0/0:29.3949:9:9:329:0:0:0,-2.70927,-10 0/0:26.3846:8:8:292:0:0:0,-2.40824,-10 0/0:26.3846:8:8:303:0:0:0,-2.40824,-10 0/0:89.6008:29:29:1095:0:0:0,-8.72987,-10 0/0:62.5082:20:20:712:0:0:0,-6.0206,-10 0/0:38.4258:12:12:453:0:0:0,-3.61236,-10 0/0:20.364:6:6:221:0:0:0,-1.80618,-10 0/0:20.364:6:6:204:0:0:0,-1.80618,-10 0/0:11.3331:3:3:110:0:0:0,-0.90309,-10 0/0:65.5185:21:21:778:0:0:0,-6.32163,-10 0/0:92.611:30:30:1086:0:0:0,-9.0309,-10 0/0:71.5391:23:23:832:0:0:0,-6.92369,-10 0/0:74.5494:24:24:899:0:0:0,-7.22472,-10 0/0:50.467:16:16:589:0:0:0,-4.81648,-10 0/0:32.4052:10:10:358:0:0:0,-3.0103,-10 0/0:53.4773:17:17:598:0:0:0,-5.11751,-10 0/0:74.5494:24:24:888:0:0:0,-7.22472,-10 0/0:59.4979:19:19:708:0:0:0,-5.71957,-10 0/0:71.5391:23:23:851:0:0:0,-6.92369,-10 0/0:32.4052:10:10:380:0:0:0,-3.0103,-10 0/0:32.4052:10:10:378:0:0:0,-3.0103,-10 0/0:65.5185:21:21:784:0:0:0,-6.32163,-10 0/1:99:29:10:358:19:710:-10,0,-10 0/0:35.4155:11:11:403:0:0:0,-3.31133,-10 0/0:38.4258:12:12:454:0:0:0,-3.61236,-10 0/0:38.4258:12:12:447:0:0:0,-3.61236,-10 0/0:74.5494:25:24:905:0:0:0,-7.22472,-10 0/0:17.3537:5:5:190:0:0:0,-1.50515,-10 0/0:23.3743:7:7:266:0:0:0,-2.10721,-10 1/1:23.1938:22:0:0:22:823:-10,-6.62266,0 0/0:47.4567:15:15:562:0:0:0,-4.51545,-10 0/0:59.4979:19:19:719:0:0:0,-5.71957,-10 0/0:11.3331:3:3:114:0:0:0,-0.90309,-10 0/0:23.3743:7:7:244:0:0:0,-2.10721,-10 0/0:86.5905:28:28:1024:0:0:0,-8.42884,-10 0/0:53.4773:17:17:611:0:0:0,-5.11751,-10 0/0:53.4773:17:17:645:0:0:0,-5.11751,-10 0/0:74.5494:24:24:897:0:0:0,-7.22472,-10 0/0:71.5391:23:23:850:0:0:0,-6.92369,-10 0/0:35.4155:11:11:418:0:0:0,-3.31133,-10 0/0:99:34:34:1282:0:0:0,-10,-10 1/1:5.13198:16:0:0:16:596:-10,-4.81648,0 0/0:59.4979:19:19:689:0:0:0,-5.71957,-10 0/0:99:44:44:1638:0:0:0,-10,-10 0/0:65.5185:21:21:794:0:0:0,-6.32163,-10 0/0:35.4155:11:11:372:0:0:0,-3.31133,-10 0/0:89.6008:29:29:1064:0:0:0,-8.72987,-10 0/0:17.3537:5:5:187:0:0:0,-1.50515,-10 0/0:80.5698:26:26:977:0:0:0,-7.82678,-10 0/0:35.4155:11:11:414:0:0:0,-3.31133,-10 0/0:17.3537:5:5:190:0:0:0,-1.50515,-10 0/0:95.6175:31:31:1141:0:0:0,-9.33193,-10 0/0:23.3743:7:7:264:0:0:0,-2.10721,-10 0/0:89.6008:29:29:1086:0:0:0,-8.72987,-10 0/0:32.4052:10:10:373:0:0:0,-3.0103,-10 0/0:38.4258:12:12:442:0:0:0,-3.61236,-10 0/0:26.3846:8:8:267:0:0:0,-2.40824,-10 0/0:86.5905:28:28:1057:0:0:0,-8.42884,-10 0/0:56.4876:18:18:650:0:0:0,-5.41854,-10 0/0:89.6008:29:29:1020:0:0:0,-8.72987,-10 0/0:62.5082:20:20:755:0:0:0,-6.0206,-10 0/0:44.4464:14:14:528:0:0:0,-4.21442,-10 0/0:80.5698:26:26:978:0:0:0,-7.82678,-10 0/0:50.467:16:16:600:0:0:0,-4.81648,-10 0/0:23.3743:7:7:266:0:0:0,-2.10721,-10 0/0:99:37:37:1379:0:0:0,-10,-10 0/0:62.5082:20:20:695:0:0:0,-6.0206,-10 0/0:74.5494:24:24:896:0:0:0,-7.22472,-10 0/0:71.5391:23:23:866:0:0:0,-6.92369,-10 0/0:50.467:16:16:604:0:0:0,-4.81648,-10 0/0:47.4567:15:15:569:0:0:0,-4.51545,-10 0/0:74.5494:24:24:910:0:0:0,-7.22472,-10 0/0:26.3846:8:8:301:0:0:0,-2.40824,-10 0/0:38.4258:12:12:419:0:0:0,-3.61236,-10 0/0:26.3846:8:8:301:0:0:0,-2.40824,-10 0/0:23.3743:7:7:266:0:0:0,-2.10721,-10 0/0:32.4052:10:10:379:0:0:0,-3.0103,-10 0/0:95.6175:32:31:1168:0:0:0,-9.33193,-10 0/0:71.5391:23:23:862:0:0:0,-6.92369,-10 0/0:74.5494:24:24:903:0:0:0,-7.22472,-10 0/0:50.467:16:16:589:0:0:0,-4.81648,-10 0/0:62.5082:20:20:758:0:0:0,-6.0206,-10 0/0:20.364:6:6:228:0:0:0,-1.80618,-10 0/0:62.5082:20:20:748:0:0:0,-6.0206,-10 0/0:41.4361:13:13:490:0:0:0,-3.91339,-10 0/0:20.364:6:6:228:0:0:0,-1.80618,-10 0/0:35.4155:11:11:418:0:0:0,-3.31133,-10 0/0:53.4773:17:17:644:0:0:0,-5.11751,-10 0/0:53.4773:17:17:624:0:0:0,-5.11751,-10 scaffold_238 159680 . C T 1639.27 . AB=0.444444;ABP=4.9405;AC=4;AF=0.0217391;AN=184;AO=62;CIGAR=1X;DP=2265;DPB=2265;DPRA=1.49364;EPP=3.15039;EPPR=3.1523;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9573;NS=92;NUMALT=1;ODDS=5.80985;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2273;QR=80440;RO=2202;RPP=137.642;RPPR=4784.59;RUN=1;SAF=30;SAP=3.15039;SAR=32;SRF=1095;SRP=3.1523;SRR=1107;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.4326:20:20:742:0:0:0,-6.0206,-10 0/0:40.3296:10:10:362:0:0:0,-3.0103,-10 0/0:76.4531:23:22:824:0:0:0,-6.62266,-10 0/0:76.4531:22:22:833:0:0:0,-6.62266,-10 0/0:88.494:26:26:951:0:0:0,-7.82678,-10 0/0:64.412:18:18:649:0:0:0,-5.41854,-10 0/0:99:37:37:1397:0:0:0,-10,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:52.3708:14:14:517:0:0:0,-4.21442,-10 0/0:28.2884:6:6:197:0:0:0,-1.80618,-10 0/0:49.3605:13:13:471:0:0:0,-3.91339,-10 0/0:28.2884:6:6:224:0:0:0,-1.80618,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:99:36:36:1353:0:0:0,-10,-10 0/0:99:31:31:1173:0:0:0,-9.33193,-10 0/0:82.4737:24:24:899:0:0:0,-7.22472,-10 0/0:82.4737:24:24:884:0:0:0,-7.22472,-10 0/0:46.3502:12:12:443:0:0:0,-3.61236,-10 0/0:99:38:38:1362:0:0:0,-10,-10 0/0:99:43:42:1483:1:16:0,-9.71082,-10 0/0:64.412:18:18:670:0:0:0,-5.41854,-10 0/0:99:36:36:1354:0:0:0,-10,-10 0/0:37.3193:9:9:340:0:0:0,-2.70927,-10 0/0:99:30:30:1064:0:0:0,-9.0309,-10 0/0:99:38:38:1390:0:0:0,-10,-10 0/0:99:41:41:1499:0:0:0,-10,-10 0/0:61.4017:17:17:643:0:0:0,-5.11751,-10 0/0:67.4223:19:19:682:0:0:0,-5.71957,-10 0/0:82.4737:24:24:870:0:0:0,-7.22472,-10 0/0:99:40:40:1518:0:0:0,-10,-10 0/0:25.2781:5:5:166:0:0:0,-1.50515,-10 0/0:43.3399:11:11:386:0:0:0,-3.31133,-10 0/0:64.412:18:18:679:0:0:0,-5.41854,-10 0/0:49.3605:13:13:462:0:0:0,-3.91339,-10 0/0:79.4634:23:23:818:0:0:0,-6.92369,-10 0/0:52.3708:14:14:524:0:0:0,-4.21442,-10 0/0:49.3605:13:13:456:0:0:0,-3.91339,-10 0/0:82.4737:24:24:909:0:0:0,-7.22472,-10 0/0:43.3399:11:11:407:0:0:0,-3.31133,-10 0/0:70.4326:20:20:722:0:0:0,-6.0206,-10 0/0:99:34:34:1270:0:0:0,-10,-10 0/0:82.4737:24:24:891:0:0:0,-7.22472,-10 0/0:76.4531:22:22:783:0:0:0,-6.62266,-10 0/0:99:58:58:2160:0:0:0,-10,-10 0/0:99:33:33:1241:0:0:0,-9.93399,-10 0/0:67.4223:19:19:695:0:0:0,-5.71957,-10 0/0:99:59:59:2156:0:0:0,-10,-10 0/0:99:33:33:1175:0:0:0,-9.93399,-10 0/0:67.4223:19:19:666:0:0:0,-5.71957,-10 0/0:99:49:49:1811:0:0:0,-10,-10 0/0:52.3708:14:14:518:0:0:0,-4.21442,-10 0/0:99:45:45:1670:0:0:0,-10,-10 0/0:43.3399:11:11:401:0:0:0,-3.31133,-10 0/0:46.3502:12:12:442:0:0:0,-3.61236,-10 0/0:99:44:44:1621:0:0:0,-10,-10 0/0:64.412:18:18:626:0:0:0,-5.41854,-10 0/0:91.5039:27:27:968:0:0:0,-8.12781,-10 0/0:31.2987:7:7:263:0:0:0,-2.10721,-10 0/0:88.494:26:26:903:0:0:0,-7.82678,-10 0/0:52.3708:14:14:514:0:0:0,-4.21442,-10 0/0:99:40:40:1468:0:0:0,-10,-10 0/0:79.4634:23:23:811:0:0:0,-6.92369,-10 0/0:99:47:47:1645:0:0:0,-10,-10 0/0:99:32:32:1199:0:0:0,-9.63296,-10 0/0:70.4326:20:20:733:0:0:0,-6.0206,-10 0/0:99:34:34:1286:0:0:0,-10,-10 0/0:58.3914:16:16:576:0:0:0,-4.81648,-10 0/0:58.3914:16:16:566:0:0:0,-4.81648,-10 0/0:99:55:55:1981:0:0:0,-10,-10 0/0:67.4223:19:19:687:0:0:0,-5.71957,-10 0/0:73.4429:21:21:753:0:0:0,-6.32163,-10 0/0:99:47:47:1687:0:0:0,-10,-10 0/1:99:34:22:764:12:435:-10,0,-10 1/1:45.3265:29:0:0:29:1090:-10,-8.72987,0 0/1:99:38:18:671:20:732:-10,0,-10 0/0:49.3605:13:13:453:0:0:0,-3.91339,-10 0/0:67.4223:19:19:699:0:0:0,-5.71957,-10 0/0:61.4017:17:17:605:0:0:0,-5.11751,-10 0/0:31.2987:7:7:265:0:0:0,-2.10721,-10 0/0:34.309:8:8:273:0:0:0,-2.40824,-10 0/0:99:39:39:1432:0:0:0,-10,-10 0/0:91.5039:27:27:995:0:0:0,-8.12781,-10 0/0:91.5039:27:27:975:0:0:0,-8.12781,-10 0/0:99:37:37:1338:0:0:0,-10,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:28.2884:6:6:215:0:0:0,-1.80618,-10 0/0:58.3914:16:16:560:0:0:0,-4.81648,-10 0/0:70.4326:20:20:725:0:0:0,-6.0206,-10 0/0:31.2987:7:7:266:0:0:0,-2.10721,-10 0/0:82.4737:24:24:897:0:0:0,-7.22472,-10 0/0:79.4634:23:23:801:0:0:0,-6.92369,-10 0/0:55.3811:15:15:560:0:0:0,-4.51545,-10 scaffold_238 287846 . T G 15965.5 . AB=0.490566;ABP=3.42001;AC=50;AF=0.271739;AN=184;AO=562;CIGAR=1X;DP=1986;DPB=1986;DPRA=1.25923;EPP=9.19243;EPPR=15.3621;GTI=2;LEN=1;MEANALT=1;MQM=58.4555;MQMR=59.1362;NS=92;NUMALT=1;ODDS=1.18289;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=20614;QR=52562;RO=1424;RPP=1214.71;RPPR=3000.38;RUN=1;SAF=302;SAP=9.8261;SAR=260;SRF=766;SRP=20.7969;SRR=658;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.2427:21:21:750:0:0:0,-6.32163,-10 0/0:40.1603:13:13:493:0:0:0,-3.91339,-10 0/0:91.3358:30:30:1127:0:0:0,-9.0309,-10 0/0:25.1088:8:8:279:0:0:0,-2.40824,-10 0/0:46.1809:15:15:565:0:0:0,-4.51545,-10 0/0:43.1706:14:14:524:0:0:0,-4.21442,-10 0/0:99:46:46:1719:0:0:0,-10,-10 1/1:39.9991:17:0:0:17:579:-10,-5.11751,0 1/1:18.927:10:0:0:10:377:-10,-3.0103,0 0/0:22.0985:7:7:264:0:0:0,-2.10721,-10 0/0:40.1603:13:13:488:0:0:0,-3.91339,-10 0/1:0.145494:2:0:0:2:76:-7.22,-0.60206,0 0/1:99:40:21:770:19:707:-10,0,-10 0/1:99:38:15:520:23:855:-10,0,-10 1/1:91.1733:34:0:0:34:1265:-10,-10,0 0/1:99:20:10:380:10:380:-10,0,-10 0/0:94.3465:31:31:1143:0:0:0,-9.33193,-10 0/0:34.1397:11:11:404:0:0:0,-3.31133,-10 0/0:76.2839:25:25:937:0:0:0,-7.52575,-10 0/1:99:44:31:1135:13:475:-10,0,-10 0/0:52.2015:17:17:640:0:0:0,-5.11751,-10 0/1:99:32:15:561:17:627:-10,0,-10 0/0:13.0676:4:4:150:0:0:0,-1.20412,-10 0/0:76.2839:25:25:925:0:0:0,-7.52575,-10 0/0:80.6504:35:34:1247:1:14:0,-7.59198,-10 0/1:99:29:20:742:9:325:-10,0,-10 0/0:88.3246:29:29:1069:0:0:0,-8.72987,-10 0/0:64.2427:21:21:741:0:0:0,-6.32163,-10 1/1:70.1021:27:0:0:27:970:-10,-8.12781,0 0/1:99:43:25:914:18:640:-10,0,-10 0/1:0.613729:4:0:0:4:149:-10,-1.20412,0 0/0:28.1191:9:9:336:0:0:0,-2.70927,-10 0/0:61.2324:20:20:747:0:0:0,-6.0206,-10 0/0:28.1191:9:9:295:0:0:0,-2.70927,-10 0/0:73.2736:24:24:872:0:0:0,-7.22472,-10 0/0:31.1294:10:10:373:0:0:0,-3.0103,-10 0/0:46.1809:15:15:539:0:0:0,-4.51545,-10 0/1:99:30:22:801:8:303:-10,0,-10 0/0:28.1191:9:9:329:0:0:0,-2.70927,-10 0/0:46.1809:15:15:567:0:0:0,-4.51545,-10 0/0:99:37:37:1356:0:0:0,-10,-10 0/0:28.1191:9:9:315:0:0:0,-2.70927,-10 0/0:67.253:22:22:789:0:0:0,-6.62266,-10 0/0:99:38:38:1334:0:0:0,-10,-10 0/1:99:26:12:452:14:524:-10,0,-10 0/1:99:13:4:121:9:337:-10,0,-10 0/1:99:49:25:947:24:899:-10,0,-10 0/0:70.2633:23:23:859:0:0:0,-6.92369,-10 0/0:58.2221:19:19:719:0:0:0,-5.71957,-10 0/1:99:33:14:523:19:674:-10,0,-10 1/1:27.9579:13:0:0:13:466:-10,-3.91339,0 0/0:99:51:51:1880:0:0:0,-10,-10 0/0:64.2427:21:21:753:0:0:0,-6.32163,-10 1/1:9.89607:7:0:0:7:230:-10,-2.10721,0 0/1:99:38:21:766:17:622:-10,0,-10 0/0:37.15:12:12:445:0:0:0,-3.61236,-10 0/0:55.2118:18:18:657:0:0:0,-5.41854,-10 1/1:33.9785:15:0:0:15:563:-10,-4.51545,0 1/1:49.03:20:0:0:20:733:-10,-6.0206,0 1/1:21.9373:11:0:0:11:399:-10,-3.31133,0 0/0:99:37:37:1373:0:0:0,-10,-10 1/1:73.1124:28:0:0:28:1038:-10,-8.42884,0 1/1:76.1226:29:0:0:29:1061:-10,-8.72987,0 0/0:67.253:22:22:824:0:0:0,-6.62266,-10 1/1:21.9373:11:0:0:11:405:-10,-3.31133,0 1/1:76.1226:29:0:0:29:1053:-10,-8.72987,0 1/1:46.0197:19:0:0:19:717:-10,-5.71957,0 0/0:34.1397:11:11:400:0:0:0,-3.31133,-10 0/1:99:42:16:586:26:966:-10,0,-10 0/0:10.0573:3:3:113:0:0:0,-0.90309,-10 0/0:52.2015:17:17:637:0:0:0,-5.11751,-10 0/0:99:34:34:1268:0:0:0,-10,-10 0/0:64.2427:21:21:793:0:0:0,-6.32163,-10 0/0:46.1809:15:15:569:0:0:0,-4.51545,-10 0/0:88.3246:29:29:1088:0:0:0,-8.72987,-10 0/0:46.1809:15:15:554:0:0:0,-4.51545,-10 0/0:43.1706:14:14:529:0:0:0,-4.21442,-10 1/1:33.9785:15:0:0:15:537:-10,-4.51545,0 0/0:22.0985:7:7:262:0:0:0,-2.10721,-10 0/0:31.1294:10:10:380:0:0:0,-3.0103,-10 0/0:99:48:48:1790:0:0:0,-10,-10 0/0:97.3523:32:32:1193:0:0:0,-9.63296,-10 0/1:99:24:8:304:16:604:-10,0,-10 0/0:76.2839:25:25:930:0:0:0,-7.52575,-10 0/0:70.2633:23:23:857:0:0:0,-6.92369,-10 0/0:10.0573:3:3:114:0:0:0,-0.90309,-10 0/0:67.253:22:22:819:0:0:0,-6.62266,-10 0/0:58.2221:19:19:681:0:0:0,-5.71957,-10 0/0:25.1088:8:8:304:0:0:0,-2.40824,-10 0/1:99:23:11:405:12:437:-10,0,-10 0/0:43.1706:14:14:527:0:0:0,-4.21442,-10 1/1:36.9888:16:0:0:16:607:-10,-4.81648,0 scaffold_238 629491 . A G 244.306 . AB=0.478261;ABP=3.10471;AC=1;AF=0.00549451;AN=182;AO=11;CIGAR=1X;DP=1427;DPB=1427;DPRA=1.47436;EPP=4.78696;EPPR=4.21258;GTI=0;LEN=1;MEANALT=1;MQM=59.0909;MQMR=59.9767;NS=91;NUMALT=1;ODDS=7.50376;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=391;QR=52408;RO=1416;RPP=26.8965;RPPR=3077.82;RUN=1;SAF=7;SAP=4.78696;SAR=4;SRF=722;SRP=4.21258;SRR=694;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.7398:16:16:604:0:0:0,-4.81648,-10 0/0:71.7295:15:15:533:0:0:0,-4.51545,-10 0/0:56.678:10:10:379:0:0:0,-3.0103,-10 0/0:44.6368:6:6:226:0:0:0,-1.80618,-10 0/0:71.7295:15:15:518:0:0:0,-4.51545,-10 0/0:56.678:10:10:372:0:0:0,-3.0103,-10 0/0:86.7808:20:20:738:0:0:0,-6.0206,-10 0/0:86.7808:20:20:747:0:0:0,-6.0206,-10 0/0:62.6986:12:12:443:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0/0:35.6059:3:3:114:0:0:0,-0.90309,-10 0/0:41.6265:5:5:181:0:0:0,-1.50515,-10 0/1:99:23:12:439:11:391:-10,0,-10 0/0:86.7808:20:20:756:0:0:0,-6.0206,-10 0/0:99:36:36:1328:0:0:0,-10,-10 0/0:71.7295:15:15:567:0:0:0,-4.51545,-10 0/0:71.7295:15:15:564:0:0:0,-4.51545,-10 0/0:68.7192:14:14:520:0:0:0,-4.21442,-10 0/0:62.6986:12:12:440:0:0:0,-3.61236,-10 0/0:99:32:32:1177:0:0:0,-9.63296,-10 0/0:77.7501:17:17:640:0:0:0,-5.11751,-10 0/0:95.8097:23:23:872:0:0:0,-6.92369,-10 0/0:53.6677:9:9:340:0:0:0,-2.70927,-10 0/0:59.6883:11:11:406:0:0:0,-3.31133,-10 0/0:77.7501:17:17:626:0:0:0,-5.11751,-10 0/0:80.7604:18:18:622:0:0:0,-5.41854,-10 0/0:74.7398:16:16:602:0:0:0,-4.81648,-10 0/0:62.6986:12:12:455:0:0:0,-3.61236,-10 0/0:80.7604:18:18:678:0:0:0,-5.41854,-10 0/0:89.7908:21:21:794:0:0:0,-6.32163,-10 0/0:50.6574:8:8:304:0:0:0,-2.40824,-10 0/0:32.5956:2:2:76:0:0:0,-0.60206,-7.22 0/0:59.6883:11:11:396:0:0:0,-3.31133,-10 0/0:56.678:10:10:364:0:0:0,-3.0103,-10 0/0:71.7295:15:15:559:0:0:0,-4.51545,-10 0/0:44.6368:6:6:223:0:0:0,-1.80618,-10 0/0:38.6162:4:4:150:0:0:0,-1.20412,-10 0/0:89.7908:21:21:774:0:0:0,-6.32163,-10 0/0:86.7808:20:20:734:0:0:0,-6.0206,-10 0/0:68.7192:14:14:504:0:0:0,-4.21442,-10 0/0:99:28:28:1063:0:0:0,-8.42884,-10 0/0:50.6574:8:8:301:0:0:0,-2.40824,-10 0/0:53.6677:9:9:341:0:0:0,-2.70927,-10 0/0:80.7604:18:18:663:0:0:0,-5.41854,-10 0/0:71.7295:15:15:537:0:0:0,-4.51545,-10 0/0:59.6883:11:11:391:0:0:0,-3.31133,-10 0/0:99:39:39:1457:0:0:0,-10,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:44.6368:6:6:219:0:0:0,-1.80618,-10 0/0:99:38:38:1413:0:0:0,-10,-10 0/0:71.7295:15:15:545:0:0:0,-4.51545,-10 0/0:86.7808:20:20:729:0:0:0,-6.0206,-10 0/0:44.6368:6:6:225:0:0:0,-1.80618,-10 0/0:38.6162:4:4:152:0:0:0,-1.20412,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:47.6471:7:7:265:0:0:0,-2.10721,-10 0/0:68.7192:14:14:530:0:0:0,-4.21442,-10 0/0:44.6368:6:6:216:0:0:0,-1.80618,-10 0/0:53.6677:9:9:342:0:0:0,-2.70927,-10 0/0:74.7398:16:16:587:0:0:0,-4.81648,-10 0/0:99:26:26:956:0:0:0,-7.82678,-10 0/0:59.6883:11:11:416:0:0:0,-3.31133,-10 0/0:99:36:36:1314:0:0:0,-10,-10 0/0:71.7295:15:15:545:0:0:0,-4.51545,-10 0/0:62.6986:12:12:453:0:0:0,-3.61236,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:83.7706:19:19:701:0:0:0,-5.71957,-10 0/0:38.6162:4:4:152:0:0:0,-1.20412,-10 0/0:89.7908:21:21:789:0:0:0,-6.32163,-10 0/0:41.6265:5:5:174:0:0:0,-1.50515,-10 0/0:98.8215:24:24:902:0:0:0,-7.22472,-10 0/0:99:30:30:1098:0:0:0,-9.0309,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:68.7192:14:14:501:0:0:0,-4.21442,-10 0/0:68.7192:14:14:476:0:0:0,-4.21442,-10 0/0:59.6883:11:11:400:0:0:0,-3.31133,-10 0/0:50.6574:8:8:304:0:0:0,-2.40824,-10 0/0:44.6368:6:6:226:0:0:0,-1.80618,-10 0/0:56.678:10:10:335:0:0:0,-3.0103,-10 0/0:53.6677:9:9:342:0:0:0,-2.70927,-10 0/0:89.7908:21:21:760:0:0:0,-6.32163,-10 0/0:95.8097:23:23:859:0:0:0,-6.92369,-10 0/0:77.7501:17:17:636:0:0:0,-5.11751,-10 0/0:95.8097:23:23:859:0:0:0,-6.92369,-10 0/0:74.7398:16:16:597:0:0:0,-4.81648,-10 0/0:53.6677:9:9:340:0:0:0,-2.70927,-10 0/0:77.7501:17:17:641:0:0:0,-5.11751,-10 0/0:59.6883:11:11:409:0:0:0,-3.31133,-10 0/0:59.6883:11:11:418:0:0:0,-3.31133,-10 0/0:98.8215:24:24:882:0:0:0,-7.22472,-10 0/0:80.7604:18:18:678:0:0:0,-5.41854,-10 0/0:68.7192:14:14:522:0:0:0,-4.21442,-10 scaffold_238 1032684 . T C 18387.4 . AB=0.508475;ABP=3.26793;AC=56;AF=0.304348;AN=184;AO=654;CIGAR=1X;DP=2154;DPB=2154;DPRA=1.11456;EPP=3.0103;EPPR=4.99345;GTI=0;LEN=1;MEANALT=1;MQM=49.0367;MQMR=53.9613;NS=92;NUMALT=1;ODDS=0.150715;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=23631;QR=55081;RO=1499;RPP=1388.62;RPPR=3223.4;RUN=1;SAF=323;SAP=3.2228;SAR=331;SRF=727;SRP=5.94374;SRR=772;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:20.0657:12:0:0:12:437:-10,-3.61236,0 1/1:32.1069:16:0:0:16:552:-10,-4.81648,0 0/1:99:25:9:331:16:557:-10,0,-10 1/1:29.0966:15:0:0:15:552:-10,-4.51545,0 0/0:45.3063:15:15:519:0:0:0,-4.51545,-10 0/0:45.3063:15:15:550:0:0:0,-4.51545,-10 0/0:99:56:56:2075:0:0:0,-10,-10 0/1:99:44:19:687:25:928:-10,0,-10 1/1:29.0966:15:0:0:15:517:-10,-4.51545,0 0/0:21.2239:7:7:266:0:0:0,-2.10721,-10 0/0:15.2033:5:5:188:0:0:0,-1.50515,-10 1/1:8.02445:8:0:0:8:298:-10,-2.40824,0 0/0:69.503:40:39:1434:1:38:0,-6.63914,-10 0/0:99:44:44:1637:0:0:0,-10,-10 0/1:99:40:20:757:20:757:-10,0,-10 0/0:99:38:38:1389:0:0:0,-10,-10 0/1:99:29:9:318:20:755:-10,0,-10 0/0:39.2857:13:13:490:0:0:0,-3.91339,-10 0/0:81.4299:27:27:1002:0:0:0,-8.12781,-10 0/1:99:50:26:954:24:848:-10,0,-10 0/1:99:26:8:291:18:674:-10,0,-10 1/1:95.3195:37:0:0:37:1345:-10,-10,0 0/0:33.2651:11:11:393:0:0:0,-3.31133,-10 0/0:78.4195:26:26:941:0:0:0,-7.82678,-10 0/0:87.4504:29:29:1020:0:0:0,-8.72987,-10 0/0:34.8222:28:27:979:1:38:0,-3.18168,-10 0/0:51.3269:17:17:633:0:0:0,-5.11751,-10 0/0:63.3681:21:21:771:0:0:0,-6.32163,-10 0/0:60.3578:20:20:740:0:0:0,-6.0206,-10 0/0:93.4709:31:31:1085:0:0:0,-9.33193,-10 0/0:27.2445:9:9:336:0:0:0,-2.70927,-10 0/1:24.1755:11:10:333:1:37:-1.43006,0,-10 1/1:53.179:23:0:0:23:834:-10,-6.92369,0 0/0:27.2445:9:9:339:0:0:0,-2.70927,-10 1/1:59.1996:25:0:0:25:912:-10,-7.52575,0 0/0:15.2033:5:5:190:0:0:0,-1.50515,-10 0/0:42.296:14:14:510:0:0:0,-4.21442,-10 1/1:99:49:0:0:49:1796:-10,-10,0 1/1:35.1172:17:0:0:17:622:-10,-5.11751,0 0/1:99:18:12:451:6:225:-10,0,-10 0/0:75.4093:25:25:929:0:0:0,-7.52575,-10 0/0:54.3372:18:18:672:0:0:0,-5.41854,-10 1/1:41.1378:19:0:0:19:645:-10,-5.71957,0 0/1:99:23:10:365:13:488:-10,0,-10 0/0:96.481:32:32:1197:0:0:0,-9.63296,-10 0/0:48.3166:16:16:589:0:0:0,-4.81648,-10 0/0:99:65:65:2411:0:0:0,-10,-10 0/0:45.3063:15:15:561:0:0:0,-4.51545,-10 0/0:54.3372:19:18:674:0:0:0,-5.41854,-10 0/0:99:41:41:1508:0:0:0,-10,-10 0/0:24.2342:8:8:294:0:0:0,-2.40824,-10 0/0:99:34:34:1253:0:0:0,-10,-10 0/0:69.3887:23:23:860:0:0:0,-6.92369,-10 0/0:24.2342:8:8:304:0:0:0,-2.40824,-10 0/0:99:48:48:1782:0:0:0,-10,-10 0/0:36.2754:12:12:451:0:0:0,-3.61236,-10 0/0:66.3784:22:22:784:0:0:0,-6.62266,-10 0/0:42.296:14:14:518:0:0:0,-4.21442,-10 0/0:75.4093:25:25:913:0:0:0,-7.52575,-10 0/0:42.296:14:14:503:0:0:0,-4.21442,-10 0/0:99:42:42:1563:0:0:0,-10,-10 0/0:51.3269:17:17:631:0:0:0,-5.11751,-10 0/1:99:44:27:978:17:623:-10,0,-10 0/0:84.4399:28:28:1033:0:0:0,-8.42884,-10 1/1:23.076:13:0:0:13:485:-10,-3.91339,0 0/0:99:39:39:1451:0:0:0,-10,-10 0/0:42.296:14:14:530:0:0:0,-4.21442,-10 0/0:36.2754:12:12:426:0:0:0,-3.61236,-10 0/0:99:39:39:1425:0:0:0,-10,-10 0/0:39.2857:13:13:452:0:0:0,-3.91339,-10 1/1:53.179:23:0:0:23:836:-10,-6.92369,0 0/1:99:32:20:743:12:423:-10,0,-10 0/1:99:19:9:326:10:372:-10,0,-10 0/0:54.3372:18:18:681:0:0:0,-5.41854,-10 0/0:99:36:36:1360:0:0:0,-10,-10 0/0:51.3269:17:17:625:0:0:0,-5.11751,-10 1/1:35.1172:17:0:0:17:611:-10,-5.11751,0 0/0:57.3475:19:19:690:0:0:0,-5.71957,-10 1/1:8.02445:8:0:0:8:246:-10,-2.40824,0 1/1:14.0451:10:0:0:10:376:-10,-3.0103,0 1/1:99:39:0:0:39:1383:-10,-10,0 1/1:74.251:30:0:0:30:1045:-10,-9.0309,0 0/1:99:32:16:603:16:563:-10,0,-10 1/1:65.2202:27:0:0:27:965:-10,-8.12781,0 0/0:72.399:24:24:857:0:0:0,-7.22472,-10 0/0:6.17238:2:2:76:0:0:0,-0.60206,-7.22 0/0:39.2857:13:13:460:0:0:0,-3.91339,-10 0/0:90.4596:30:30:1072:0:0:0,-9.0309,-10 1/1:17.0554:11:0:0:11:384:-10,-3.31133,0 0/1:99:20:8:301:12:440:-10,0,-10 1/1:68.2304:28:0:0:28:1024:-10,-8.42884,0 0/0:51.3269:17:17:621:0:0:0,-5.11751,-10 scaffold_239 48774 . G T 1660.44 . AB=0.478261;ABP=3.38795;AC=5;AF=0.0271739;AN=184;AO=64;CIGAR=1X;DP=1888;DPB=1888;DPRA=1.3293;EPP=5.18177;EPPR=5.75924;GTI=0;LEN=1;MEANALT=1;MQM=59.5312;MQMR=59.9703;NS=92;NUMALT=1;ODDS=3.19679;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2328;QR=65938;RO=1820;RPP=133.434;RPPR=3491.8;RUN=1;SAF=37;SAP=6.40323;SAR=27;SRF=955;SRP=12.6745;SRR=865;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.2631:12:12:432:0:0:0,-3.61236,-10 0/0:38.2322:9:9:326:0:0:0,-2.70927,-10 0/0:65.3249:19:18:634:0:0:0,-5.41854,-10 0/0:47.2631:12:12:444:0:0:0,-3.61236,-10 0/0:71.3455:20:20:701:0:0:0,-6.0206,-10 0/0:32.2116:7:7:266:0:0:0,-2.10721,-10 0/0:92.4163:27:27:985:0:0:0,-8.12781,-10 0/0:99:36:35:1250:0:0:0,-10,-10 0/0:77.366:22:22:816:0:0:0,-6.62266,-10 0/0:35.2219:8:8:280:0:0:0,-2.40824,-10 0/0:26.191:5:5:189:0:0:0,-1.50515,-10 0/0:50.2734:13:13:487:0:0:0,-3.91339,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:99:32:32:1195:0:0:0,-9.63296,-10 0/0:92.4163:27:27:1017:0:0:0,-8.12781,-10 0/0:99:33:33:1118:0:0:0,-9.93399,-10 0/0:99:38:38:1414:0:0:0,-10,-10 0/0:50.2734:13:13:469:0:0:0,-3.91339,-10 0/0:68.3352:19:19:690:0:0:0,-5.71957,-10 0/0:99:36:36:1272:0:0:0,-10,-10 0/0:80.3763:23:23:847:0:0:0,-6.92369,-10 0/1:99:38:19:673:19:698:-10,0,-10 0/0:50.2734:13:13:434:0:0:0,-3.91339,-10 0/0:99:30:30:1054:0:0:0,-9.0309,-10 0/0:77.366:22:22:799:0:0:0,-6.62266,-10 0/0:99:34:34:1284:0:0:0,-10,-10 0/0:71.3455:20:20:754:0:0:0,-6.0206,-10 0/0:44.2528:11:11:395:0:0:0,-3.31133,-10 0/0:83.3867:24:24:806:0:0:0,-7.22472,-10 0/0:99:42:42:1539:0:0:0,-10,-10 0/0:32.2116:7:7:266:0:0:0,-2.10721,-10 0/0:29.2013:6:6:228:0:0:0,-1.80618,-10 0/0:65.3249:18:18:615:0:0:0,-5.41854,-10 0/0:47.2631:12:12:448:0:0:0,-3.61236,-10 1/1:14.1535:19:0:0:19:721:-10,-5.71957,0 0/0:44.2528:11:11:418:0:0:0,-3.31133,-10 0/0:41.2425:10:10:350:0:0:0,-3.0103,-10 0/0:99:32:32:1200:0:0:0,-9.63296,-10 0/0:59.3043:16:16:584:0:0:0,-4.81648,-10 0/1:99:17:11:356:6:183:-10,0,-10 0/0:86.3966:25:25:895:0:0:0,-7.52575,-10 0/0:86.3966:25:25:892:0:0:0,-7.52575,-10 0/0:50.2734:13:13:480:0:0:0,-3.91339,-10 0/1:99:37:18:672:19:688:-10,0,-10 0/0:80.3763:23:23:848:0:0:0,-6.92369,-10 0/0:68.3352:19:19:681:0:0:0,-5.71957,-10 0/0:99:35:35:1253:0:0:0,-10,-10 0/0:68.3352:19:19:717:0:0:0,-5.71957,-10 0/0:62.3146:17:17:588:0:0:0,-5.11751,-10 0/0:99:38:38:1334:0:0:0,-10,-10 0/0:71.3455:20:20:725:0:0:0,-6.0206,-10 0/0:33.0207:23:22:833:1:38:0,-1.76196,-10 0/0:56.294:15:15:530:0:0:0,-4.51545,-10 0/0:20.1704:3:3:112:0:0:0,-0.90309,-10 0/0:99:54:54:1940:0:0:0,-10,-10 0/0:65.3249:18:18:674:0:0:0,-5.41854,-10 0/0:74.3557:21:21:732:0:0:0,-6.32163,-10 0/0:29.2013:6:6:228:0:0:0,-1.80618,-10 0/0:68.3352:19:19:688:0:0:0,-5.71957,-10 0/0:41.2425:10:10:365:0:0:0,-3.0103,-10 0/0:74.3557:21:21:767:0:0:0,-6.32163,-10 0/0:50.2734:13:13:443:0:0:0,-3.91339,-10 0/0:99:42:42:1511:0:0:0,-10,-10 0/0:65.3249:18:18:656:0:0:0,-5.41854,-10 0/0:32.2116:7:7:242:0:0:0,-2.10721,-10 0/0:74.3557:21:21:772:0:0:0,-6.32163,-10 0/0:50.2734:13:13:490:0:0:0,-3.91339,-10 0/0:41.2425:10:10:369:0:0:0,-3.0103,-10 0/0:80.3763:23:23:792:0:0:0,-6.92369,-10 0/0:59.3043:16:16:597:0:0:0,-4.81648,-10 0/0:47.2631:12:12:425:0:0:0,-3.61236,-10 0/0:86.3966:25:25:926:0:0:0,-7.52575,-10 0/0:68.3352:20:19:682:0:0:0,-5.71957,-10 0/0:74.3557:21:21:792:0:0:0,-6.32163,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:59.3043:16:16:587:0:0:0,-4.81648,-10 0/0:68.3352:19:19:711:0:0:0,-5.71957,-10 0/0:56.294:16:15:528:0:0:0,-4.51545,-10 0/0:29.2013:6:6:228:0:0:0,-1.80618,-10 0/0:50.2734:13:13:452:0:0:0,-3.91339,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:99:31:31:1123:0:0:0,-9.33193,-10 0/0:86.3966:25:25:912:0:0:0,-7.52575,-10 0/0:99:30:30:1069:0:0:0,-9.0309,-10 0/0:32.2116:7:7:240:0:0:0,-2.10721,-10 0/0:59.3043:16:16:591:0:0:0,-4.81648,-10 0/0:56.294:15:15:564:0:0:0,-4.51545,-10 0/0:26.191:5:5:188:0:0:0,-1.50515,-10 0/0:83.3867:24:24:859:0:0:0,-7.22472,-10 0/0:83.3867:24:24:835:0:0:0,-7.22472,-10 0/0:59.3043:16:16:592:0:0:0,-4.81648,-10 scaffold_239 48806 . G A 1038.14 . AB=0.555556;ABP=4.9405;AC=2;AF=0.0108696;AN=184;AO=44;CIGAR=1X;DP=1856;DPB=1856;DPRA=1.48276;EPP=10.1169;EPPR=3.24544;GTI=0;LEN=1;MEANALT=1;MQM=58.8864;MQMR=59.8812;NS=92;NUMALT=1;ODDS=1.05391;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1515;QR=65596;RO=1810;RPP=98.5551;RPPR=3478.33;RUN=1;SAF=16;SAP=10.1169;SAR=28;SRF=898;SRP=3.24544;SRR=912;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.7186:18:18:587:0:0:0,-5.41854,-10 0/0:32.6465:11:11:389:0:0:0,-3.31133,-10 0/0:86.8319:30:29:1068:0:0:0,-8.72987,-10 0/0:35.6568:12:12:455:0:0:0,-3.61236,-10 0/0:41.6774:14:14:516:0:0:0,-4.21442,-10 0/0:38.6671:13:13:493:0:0:0,-3.91339,-10 0/1:99:36:15:545:21:746:-10,0,-10 0/0:83.8214:28:28:1011:0:0:0,-8.42884,-10 0/0:35.6568:12:12:432:0:0:0,-3.61236,-10 0/0:8.56408:3:3:113:0:0:0,-0.90309,-10 0/0:41.6774:14:14:531:0:0:0,-4.21442,-10 0/0:41.6774:14:14:518:0:0:0,-4.21442,-10 0/0:89.8422:30:30:1116:0:0:0,-9.0309,-10 0/0:77.801:26:26:962:0:0:0,-7.82678,-10 0/0:99:34:34:1197:0:0:0,-10,-10 0/0:65.7598:22:22:784:0:0:0,-6.62266,-10 0/0:95.8593:32:32:1160:0:0:0,-9.63296,-10 0/0:29.6362:10:10:346:0:0:0,-3.0103,-10 0/0:14.9297:12:11:387:1:16:0,-0.933179,-10 0/0:99:39:39:1346:0:0:0,-10,-10 0/0:62.7495:21:21:767:0:0:0,-6.32163,-10 0/0:86.8319:29:29:1094:0:0:0,-8.72987,-10 0/0:17.595:6:6:220:0:0:0,-1.80618,-10 0/0:68.7701:23:23:855:0:0:0,-6.92369,-10 0/0:77.801:26:26:913:0:0:0,-7.82678,-10 0/0:42.4003:22:21:786:1:16:0,-3.68024,-10 0/0:50.7083:17:17:618:0:0:0,-5.11751,-10 0/0:20.6053:7:7:260:0:0:0,-2.10721,-10 0/0:53.7186:18:18:672:0:0:0,-5.41854,-10 0/0:89.8422:30:30:1063:0:0:0,-9.0309,-10 0/0:14.5847:5:5:185:0:0:0,-1.50515,-10 0/0:14.5847:5:5:180:0:0:0,-1.50515,-10 0/0:53.7186:18:18:609:0:0:0,-5.41854,-10 0/0:38.6671:13:13:476:0:0:0,-3.91339,-10 0/0:56.7289:19:19:689:0:0:0,-5.71957,-10 0/0:32.6465:11:11:413:0:0:0,-3.31133,-10 0/0:35.6568:12:12:430:0:0:0,-3.61236,-10 0/0:80.8112:27:27:961:0:0:0,-8.12781,-10 0/0:50.7083:17:17:641:0:0:0,-5.11751,-10 0/0:17.595:6:6:228:0:0:0,-1.80618,-10 0/0:77.801:26:26:963:0:0:0,-7.82678,-10 0/0:68.7701:23:23:830:0:0:0,-6.92369,-10 0/0:53.7186:18:18:675:0:0:0,-5.41854,-10 0/0:68.7701:23:23:867:0:0:0,-6.92369,-10 0/0:53.7186:18:18:658:0:0:0,-5.41854,-10 0/0:35.6568:12:12:395:0:0:0,-3.61236,-10 0/0:99:49:49:1806:0:0:0,-10,-10 0/0:74.7907:25:25:910:0:0:0,-7.52575,-10 0/0:50.7083:17:17:631:0:0:0,-5.11751,-10 0/0:99:38:38:1287:0:0:0,-10,-10 0/0:44.6877:15:15:493:0:0:0,-4.51545,-10 0/0:99:37:36:1324:0:0:0,-10,-10 0/0:23.6156:8:8:287:0:0:0,-2.40824,-10 0/0:8.56408:3:3:87:0:0:0,-0.90309,-8.12 0/0:88.1916:38:37:1355:1:16:0,-8.25936,-10 0/0:65.7598:22:22:826:0:0:0,-6.62266,-10 0/0:50.7083:17:17:609:0:0:0,-5.11751,-10 0/0:11.5744:4:4:130:0:0:0,-1.20412,-10 0/0:53.7186:18:18:678:0:0:0,-5.41854,-10 0/0:47.698:16:16:596:0:0:0,-4.81648,-10 0/0:99:35:35:1273:0:0:0,-10,-10 0/0:71.7804:24:24:858:0:0:0,-7.22472,-10 0/1:99:36:17:621:19:705:-10,0,-10 0/0:80.8112:27:27:945:0:0:0,-8.12781,-10 0/0:53.7186:18:18:626:0:0:0,-5.41854,-10 0/0:80.8112:27:27:1006:0:0:0,-8.12781,-10 0/0:59.7392:20:20:726:0:0:0,-6.0206,-10 0/0:41.6774:14:14:525:0:0:0,-4.21442,-10 0/0:99:37:37:1315:0:0:0,-10,-10 0/0:35.6568:12:12:431:0:0:0,-3.61236,-10 0/0:56.7289:19:19:678:0:0:0,-5.71957,-10 0/0:92.8507:31:31:1133:0:0:0,-9.33193,-10 0/0:65.1357:30:29:1093:1:16:0,-5.95378,-10 0/0:47.698:16:16:597:0:0:0,-4.81648,-10 0/0:74.7907:25:25:876:0:0:0,-7.52575,-10 0/0:38.6671:13:13:475:0:0:0,-3.91339,-10 0/0:62.7495:21:21:760:0:0:0,-6.32163,-10 0/0:56.7289:19:19:720:0:0:0,-5.71957,-10 0/0:11.5744:4:4:128:0:0:0,-1.20412,-10 0/0:32.6465:11:11:417:0:0:0,-3.31133,-10 0/0:99:45:45:1626:0:0:0,-10,-10 0/0:86.8319:29:29:1056:0:0:0,-8.72987,-10 0/0:86.8319:29:29:1037:0:0:0,-8.72987,-10 0/0:74.7907:25:25:916:0:0:0,-7.52575,-10 0/0:80.8112:27:27:998:0:0:0,-8.12781,-10 0/0:17.595:6:6:212:0:0:0,-1.80618,-10 0/0:62.7495:21:21:758:0:0:0,-6.32163,-10 0/0:26.6259:9:9:339:0:0:0,-2.70927,-10 0/0:20.6053:7:7:233:0:0:0,-2.10721,-10 0/0:41.6774:14:14:506:0:0:0,-4.21442,-10 0/0:71.7804:24:24:837:0:0:0,-7.22472,-10 0/0:35.6568:12:12:452:0:0:0,-3.61236,-10 scaffold_239 49402 . C T 398.244 . AB=0.470588;ABP=3.26577;AC=1;AF=0.00543478;AN=184;AO=17;CIGAR=1X;DP=2398;DPB=2398;DPRA=1.11538;EPP=6.20364;EPPR=3.16443;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9962;NS=92;NUMALT=1;ODDS=10.637;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=604;QR=86424;RO=2381;RPP=39.9253;RPPR=5173.29;RUN=1;SAF=6;SAP=6.20364;SAR=11;SRF=1184;SRP=3.16443;SRR=1197;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.7288:24:23:829:1:16:0,-4.24451,-10 0/0:88.3394:18:18:665:0:0:0,-5.41854,-10 0/0:99:28:28:1052:0:0:0,-8.42884,-10 0/0:99:22:22:784:0:0:0,-6.62266,-10 0/0:94.36:20:20:729:0:0:0,-6.0206,-10 0/0:67.2682:11:11:379:0:0:0,-3.31133,-10 0/0:99:42:42:1533:0:0:0,-10,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:97.3694:21:21:752:0:0:0,-6.32163,-10 0/0:46.1961:4:4:149:0:0:0,-1.20412,-10 0/0:55.227:7:7:242:0:0:0,-2.10721,-10 0/0:64.2579:10:10:358:0:0:0,-3.0103,-10 0/0:99:44:44:1611:0:0:0,-10,-10 0/0:99:49:49:1806:0:0:0,-10,-10 0/0:99:40:40:1444:0:0:0,-10,-10 0/0:99:23:23:835:0:0:0,-6.92369,-10 0/0:99:33:33:1238:0:0:0,-9.93399,-10 0/0:85.3299:17:17:609:0:0:0,-5.11751,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:99:39:39:1439:0:0:0,-10,-10 0/0:99:24:24:860:0:0:0,-7.22472,-10 0/0:99:36:36:1260:0:0:0,-10,-10 0/0:70.2785:12:12:450:0:0:0,-3.61236,-10 0/0:99:36:36:1302:0:0:0,-10,-10 0/0:99:34:34:1221:0:0:0,-10,-10 0/0:99:37:37:1349:0:0:0,-10,-10 0/0:97.3694:21:21:776:0:0:0,-6.32163,-10 0/0:64.2579:10:10:321:0:0:0,-3.0103,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:99:41:41:1485:0:0:0,-10,-10 0/0:58.2373:8:8:303:0:0:0,-2.40824,-10 0/0:46.1961:4:4:150:0:0:0,-1.20412,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:70.2785:12:12:442:0:0:0,-3.61236,-10 0/0:99:23:23:800:0:0:0,-6.92369,-10 0/0:70.2785:12:12:447:0:0:0,-3.61236,-10 0/0:64.2579:10:10:347:0:0:0,-3.0103,-10 0/0:99:51:51:1906:0:0:0,-10,-10 0/0:99:22:22:808:0:0:0,-6.62266,-10 0/0:99:23:23:826:0:0:0,-6.92369,-10 0/0:99:41:41:1464:0:0:0,-10,-10 0/0:99:28:28:987:0:0:0,-8.42884,-10 0/0:91.3502:19:19:687:0:0:0,-5.71957,-10 0/0:99:40:40:1495:0:0:0,-10,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:99:22:22:810:0:0:0,-6.62266,-10 0/0:99:52:52:1834:0:0:0,-10,-10 0/0:99:43:43:1551:0:0:0,-10,-10 0/0:99:26:26:914:0:0:0,-7.82678,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:79.3094:15:15:521:0:0:0,-4.51545,-10 0/0:99:38:38:1399:0:0:0,-10,-10 0/0:99:26:26:953:0:0:0,-7.82678,-10 0/0:49.2064:5:5:184:0:0:0,-1.50515,-10 0/0:99:43:43:1531:0:0:0,-10,-10 0/0:88.3394:18:18:668:0:0:0,-5.41854,-10 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:88.3394:18:18:607:0:0:0,-5.41854,-10 0/0:91.3502:19:19:687:0:0:0,-5.71957,-10 0/0:99:22:22:747:0:0:0,-6.62266,-10 0/0:99:38:38:1411:0:0:0,-10,-10 0/0:97.3694:21:21:761:0:0:0,-6.32163,-10 0/0:99:48:48:1792:0:0:0,-10,-10 0/0:99:29:29:1055:0:0:0,-8.72987,-10 0/0:82.3196:16:16:597:0:0:0,-4.81648,-10 0/0:99:38:38:1372:0:0:0,-10,-10 0/0:99:22:22:819:0:0:0,-6.62266,-10 0/0:99:24:24:866:0:0:0,-7.22472,-10 0/0:99:47:47:1687:0:0:0,-10,-10 0/0:73.2888:13:13:465:0:0:0,-3.91339,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:99:49:49:1799:0:0:0,-10,-10 0/0:99:35:35:1268:0:0:0,-10,-10 0/0:94.36:20:20:756:0:0:0,-6.0206,-10 0/1:99:34:18:681:16:588:-10,0,-10 0/0:97.3694:21:21:729:0:0:0,-6.32163,-10 0/0:79.3094:15:15:563:0:0:0,-4.51545,-10 0/0:73.2888:13:13:444:0:0:0,-3.91339,-10 0/0:61.2476:9:9:335:0:0:0,-2.70927,-10 0/0:76.2991:14:14:508:0:0:0,-4.21442,-10 0/0:99:56:56:2021:0:0:0,-10,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:99:36:36:1274:0:0:0,-10,-10 0/0:99:27:27:1010:0:0:0,-8.12781,-10 0/0:99:33:33:1174:0:0:0,-9.93399,-10 0/0:46.1961:4:4:152:0:0:0,-1.20412,-10 0/0:99:24:24:904:0:0:0,-7.22472,-10 0/0:88.3394:18:18:644:0:0:0,-5.41854,-10 0/0:70.2785:12:12:408:0:0:0,-3.61236,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:99:26:26:922:0:0:0,-7.82678,-10 0/0:99:26:26:926:0:0:0,-7.82678,-10 scaffold_239 65045 . G T 1570.9 . AB=0.618557;ABP=14.8527;AC=6;AF=0.0326087;AN=184;AO=62;CIGAR=1X;DP=1685;DPB=1685;DPRA=0.988636;EPP=3.57068;EPPR=4.46911;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9772;NS=92;NUMALT=1;ODDS=6.10893;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2284;QR=59478;RO=1621;RPP=137.642;RPPR=3309.17;RUN=1;SAF=29;SAP=3.57068;SAR=33;SRF=819;SRP=3.39744;SRR=802;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:27.441:19:18:674:1:38:0,-0.640816,-10 0/0:41.6285:8:8:300:0:0:0,-2.40824,-10 0/0:56.68:13:13:490:0:0:0,-3.91339,-10 0/0:65.7109:16:16:595:0:0:0,-4.81648,-10 0/0:80.7623:21:21:768:0:0:0,-6.32163,-10 0/0:38.6182:7:7:258:0:0:0,-2.10721,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:86.7831:23:23:820:0:0:0,-6.92369,-10 0/0:77.752:20:20:722:0:0:0,-6.0206,-10 0/0:38.6182:7:7:259:0:0:0,-2.10721,-10 0/0:50.6594:11:11:417:0:0:0,-3.31133,-10 0/0:26.577:3:3:114:0:0:0,-0.90309,-10 0/0:92.8024:25:25:936:0:0:0,-7.52575,-10 0/0:99:39:39:1460:0:0:0,-10,-10 0/0:99:30:30:1107:0:0:0,-9.0309,-10 0/0:98.8196:27:27:1000:0:0:0,-8.12781,-10 0/0:92.8024:25:25:927:0:0:0,-7.52575,-10 0/0:47.6491:10:10:377:0:0:0,-3.0103,-10 0/0:65.7109:16:16:569:0:0:0,-4.81648,-10 0/0:83.7727:22:22:813:0:0:0,-6.62266,-10 0/0:65.7109:16:16:600:0:0:0,-4.81648,-10 0/0:86.7831:23:23:827:0:0:0,-6.92369,-10 0/0:47.6491:10:10:380:0:0:0,-3.0103,-10 0/0:86.7831:23:23:857:0:0:0,-6.92369,-10 0/0:50.6594:11:11:416:0:0:0,-3.31133,-10 0/0:86.7831:23:23:849:0:0:0,-6.92369,-10 0/0:71.7314:18:18:679:0:0:0,-5.41854,-10 0/0:71.7314:18:18:629:0:0:0,-5.41854,-10 0/0:92.8024:25:25:936:0:0:0,-7.52575,-10 0/0:76.5852:29:28:1063:1:16:0,-5.66747,-10 0/0:47.6491:10:10:380:0:0:0,-3.0103,-10 0/0:41.6285:8:8:243:0:0:0,-2.40824,-10 0/0:68.7211:17:17:610:0:0:0,-5.11751,-10 0/0:53.6697:12:12:434:0:0:0,-3.61236,-10 0/0:50.6594:11:11:410:0:0:0,-3.31133,-10 0/0:29.5873:4:4:151:0:0:0,-1.20412,-10 0/0:59.6903:14:14:529:0:0:0,-4.21442,-10 0/0:95.8116:26:26:958:0:0:0,-7.82678,-10 0/0:80.7623:21:21:774:0:0:0,-6.32163,-10 0/0:53.6697:12:12:429:0:0:0,-3.61236,-10 0/0:99:29:29:1076:0:0:0,-8.72987,-10 0/0:77.752:20:20:751:0:0:0,-6.0206,-10 0/0:59.6903:14:14:501:0:0:0,-4.21442,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:59.6903:14:14:523:0:0:0,-4.21442,-10 0/0:50.6594:11:11:368:0:0:0,-3.31133,-10 0/0:99:37:37:1320:0:0:0,-10,-10 0/0:62.7006:15:15:541:0:0:0,-4.51545,-10 0/0:65.7109:16:16:524:0:0:0,-4.81648,-10 0/0:99:41:40:1455:0:0:0,-10,-10 0/0:62.7006:15:15:524:0:0:0,-4.51545,-10 0/0:83.7727:22:22:825:0:0:0,-6.62266,-10 0/0:56.68:13:13:484:0:0:0,-3.91339,-10 0/0:26.577:3:3:112:0:0:0,-0.90309,-10 0/0:99:43:43:1544:0:0:0,-10,-10 0/0:41.6285:8:8:282:0:0:0,-2.40824,-10 0/0:71.7314:18:18:649:0:0:0,-5.41854,-10 0/1:0.00395555:8:0:0:8:287:-10,-2.40824,0 0/1:0.000494247:5:0:0:5:190:-10,-1.50515,0 0/0:41.6285:8:8:303:0:0:0,-2.40824,-10 0/0:95.8116:26:26:954:0:0:0,-7.82678,-10 0/0:59.6903:14:14:518:0:0:0,-4.21442,-10 0/0:99:41:41:1542:0:0:0,-10,-10 0/0:71.7314:18:18:653:0:0:0,-5.41854,-10 0/0:50.6594:11:11:384:0:0:0,-3.31133,-10 0/0:99:41:41:1483:0:0:0,-10,-10 0/0:65.7109:16:16:604:0:0:0,-4.81648,-10 0/0:80.7623:21:21:702:0:0:0,-6.32163,-10 0/0:99:30:30:1133:0:0:0,-9.0309,-10 0/0:44.6388:9:9:318:0:0:0,-2.70927,-10 0/0:65.7109:16:16:593:0:0:0,-4.81648,-10 0/0:89.7927:24:24:903:0:0:0,-7.22472,-10 0/0:86.7831:23:23:854:0:0:0,-6.92369,-10 0/0:62.7006:15:15:552:0:0:0,-4.51545,-10 0/0:77.752:20:20:721:0:0:0,-6.0206,-10 0/0:53.6697:12:12:430:0:0:0,-3.61236,-10 0/0:56.68:13:13:467:0:0:0,-3.91339,-10 0/0:68.7211:17:17:635:0:0:0,-5.11751,-10 0/1:0.00395555:8:0:0:8:304:-10,-2.40824,0 0/0:32.5976:5:5:186:0:0:0,-1.50515,-10 0/1:99:40:16:579:24:905:-10,0,-10 0/0:89.7927:25:24:853:0:0:0,-7.22472,-10 0/1:99:18:10:376:8:282:-10,0,-10 0/0:83.7727:22:22:835:0:0:0,-6.62266,-10 0/0:95.8116:26:26:976:0:0:0,-7.82678,-10 0/0:50.6594:11:11:418:0:0:0,-3.31133,-10 0/0:71.7314:18:18:667:0:0:0,-5.41854,-10 0/0:62.7006:15:15:548:0:0:0,-4.51545,-10 0/0:50.6594:11:11:396:0:0:0,-3.31133,-10 0/0:68.7211:17:17:618:0:0:0,-5.11751,-10 0/1:99:18:11:404:7:262:-10,0,-10 0/0:41.6285:8:8:304:0:0:0,-2.40824,-10 scaffold_239 65082 . A T 7434.43 . AB=0.521739;ABP=3.76559;AC=30;AF=0.163043;AN=184;AO=273;CIGAR=1X;DP=1664;DPB=1664;DPRA=0.997391;EPP=3.01825;EPPR=3.63518;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9734;NS=92;NUMALT=1;ODDS=1.28267;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9994;QR=50864;RO=1390;RPP=595.822;RPPR=3021.36;RUN=1;SAF=137;SAP=3.01825;SAR=136;SRF=685;SRP=3.63518;SRR=705;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.6676:19:19:680:0:0:0,-5.71957,-10 0/1:0.274425:8:0:0:8:304:-10,-2.40824,0 0/0:43.6058:13:13:489:0:0:0,-3.91339,-10 1/1:22.4199:16:0:0:16:582:-10,-4.81648,0 0/0:67.6882:21:21:785:0:0:0,-6.32163,-10 0/0:25.544:7:7:266:0:0:0,-2.10721,-10 0/1:99:31:13:487:18:653:-10,0,-10 0/0:73.7088:23:23:838:0:0:0,-6.92369,-10 0/0:64.6779:20:20:704:0:0:0,-6.0206,-10 0/0:25.544:7:7:265:0:0:0,-2.10721,-10 0/0:34.5749:10:10:373:0:0:0,-3.0103,-10 0/0:13.5028:3:3:114:0:0:0,-0.90309,-10 0/0:76.7191:24:24:891:0:0:0,-7.22472,-10 0/0:99:39:39:1360:0:0:0,-10,-10 0/0:94.7807:30:30:1107:0:0:0,-9.0309,-10 0/0:79.7294:25:25:918:0:0:0,-7.52575,-10 0/0:79.7294:25:25:904:0:0:0,-7.52575,-10 0/0:34.5749:10:10:380:0:0:0,-3.0103,-10 0/0:52.6367:16:16:571:0:0:0,-4.81648,-10 0/0:67.6882:21:21:783:0:0:0,-6.32163,-10 0/0:52.6367:16:16:603:0:0:0,-4.81648,-10 0/1:99:23:13:465:10:369:-10,0,-10 0/0:34.5749:10:10:379:0:0:0,-3.0103,-10 0/1:99:23:12:453:11:412:-10,0,-10 0/0:37.5852:11:11:406:0:0:0,-3.31133,-10 0/0:70.6985:22:22:798:0:0:0,-6.62266,-10 0/0:58.6573:18:18:661:0:0:0,-5.41854,-10 0/0:58.6573:18:18:642:0:0:0,-5.41854,-10 0/0:85.75:27:27:1001:0:0:0,-8.12781,-10 0/0:91.7705:29:29:1090:0:0:0,-8.72987,-10 0/0:34.5749:10:10:380:0:0:0,-3.0103,-10 0/0:28.5543:8:8:277:0:0:0,-2.40824,-10 0/0:55.647:17:17:627:0:0:0,-5.11751,-10 0/0:40.5955:12:12:443:0:0:0,-3.61236,-10 0/0:37.5852:11:11:418:0:0:0,-3.31133,-10 0/0:16.5131:4:4:144:0:0:0,-1.20412,-10 0/0:40.5955:12:12:453:0:0:0,-3.61236,-10 0/0:76.7191:25:24:866:0:0:0,-7.22472,-10 1/1:37.4714:21:0:0:21:759:-10,-6.32163,0 0/0:40.5955:12:12:420:0:0:0,-3.61236,-10 0/0:91.7705:29:29:1079:0:0:0,-8.72987,-10 0/0:64.6779:20:20:756:0:0:0,-6.0206,-10 1/1:10.3787:12:0:0:12:429:-10,-3.61236,0 0/0:94.7807:30:30:1091:0:0:0,-9.0309,-10 0/0:46.6161:14:14:502:0:0:0,-4.21442,-10 0/0:37.5852:11:11:406:0:0:0,-3.31133,-10 0/0:99:36:36:1327:0:0:0,-10,-10 0/0:49.6264:15:15:555:0:0:0,-4.51545,-10 0/0:52.6367:16:16:576:0:0:0,-4.81648,-10 0/0:99:39:39:1372:0:0:0,-10,-10 0/0:46.6161:14:14:507:0:0:0,-4.21442,-10 0/0:70.6985:22:22:776:0:0:0,-6.62266,-10 0/0:43.6058:13:13:490:0:0:0,-3.91339,-10 0/0:13.5028:3:3:114:0:0:0,-0.90309,-10 0/0:99:45:45:1625:0:0:0,-10,-10 0/1:0.274425:8:0:0:8:300:-10,-2.40824,0 0/1:99:17:12:420:5:180:-10,0,-10 0/0:28.5543:8:8:300:0:0:0,-2.40824,-10 0/0:19.5234:5:5:190:0:0:0,-1.50515,-10 0/0:28.5543:8:8:289:0:0:0,-2.40824,-10 0/1:99:26:17:609:9:329:-10,0,-10 0/0:40.5955:12:12:425:0:0:0,-3.61236,-10 0/0:99:41:41:1503:0:0:0,-10,-10 0/1:99:18:7:261:11:379:-10,0,-10 0/0:37.5852:11:11:411:0:0:0,-3.31133,-10 0/0:99:41:41:1540:0:0:0,-10,-10 0/0:49.6264:15:15:560:0:0:0,-4.51545,-10 0/0:67.6882:21:21:724:0:0:0,-6.32163,-10 0/0:94.7807:30:30:1103:0:0:0,-9.0309,-10 0/1:0.567367:9:0:0:9:318:-10,-2.70927,0 1/1:22.4199:16:0:0:16:559:-10,-4.81648,0 1/1:46.5023:24:0:0:24:895:-10,-7.22472,0 1/1:43.492:23:0:0:23:871:-10,-6.92369,0 1/1:19.4096:15:0:0:15:569:-10,-4.51545,0 1/1:34.4611:20:0:0:20:720:-10,-6.0206,0 0/0:40.5955:12:12:449:0:0:0,-3.61236,-10 1/1:13.389:13:0:0:13:462:-10,-3.91339,0 1/1:25.4302:17:0:0:17:639:-10,-5.11751,0 0/0:28.5543:8:8:301:0:0:0,-2.40824,-10 0/0:19.5234:5:5:167:0:0:0,-1.50515,-10 0/0:99:40:40:1466:0:0:0,-10,-10 0/0:76.7191:24:24:846:0:0:0,-7.22472,-10 0/0:58.6573:18:18:658:0:0:0,-5.41854,-10 0/1:99:21:14:527:7:265:-10,0,-10 0/0:82.7397:26:26:976:0:0:0,-7.82678,-10 0/0:37.5852:11:11:395:0:0:0,-3.31133,-10 0/0:58.6573:18:18:666:0:0:0,-5.41854,-10 0/0:46.6161:14:14:516:0:0:0,-4.21442,-10 0/0:37.5852:11:11:396:0:0:0,-3.31133,-10 0/0:52.6367:16:16:572:0:0:0,-4.81648,-10 0/0:58.6573:18:18:673:0:0:0,-5.41854,-10 0/0:28.5543:8:8:304:0:0:0,-2.40824,-10 scaffold_239 65485 . C T 22283.1 . AB=0.511792;ABP=3.52244;AC=66;AF=0.358696;AN=184;AO=784;CIGAR=1X;DP=2334;DPB=2334;DPRA=0.94068;EPP=7.89611;EPPR=3.0159;GTI=4;LEN=1;MEANALT=1;MQM=59.7054;MQMR=59.9626;NS=92;NUMALT=1;ODDS=0.328502;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=28710;QR=56171;RO=1550;RPP=1705.44;RPPR=3368.79;RUN=1;SAF=413;SAP=7.89611;SAR=371;SRF=774;SRP=3.0159;SRR=776;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:53.1344:16:16:593:0:0:0,-4.81648,-10 0/0:80.2271:25:25:901:0:0:0,-7.52575,-10 1/1:42.9699:20:0:0:20:746:-10,-6.0206,0 0/0:71.1962:22:22:782:0:0:0,-6.62266,-10 0/0:32.0623:9:9:313:0:0:0,-2.70927,-10 1/1:33.939:17:0:0:17:574:-10,-5.11751,0 0/0:99:39:39:1447:0:0:0,-10,-10 0/0:99:46:46:1660:0:0:0,-10,-10 0/0:86.2478:27:27:993:0:0:0,-8.12781,-10 0/0:26.0417:7:7:255:0:0:0,-2.10721,-10 0/0:44.1035:13:13:472:0:0:0,-3.91339,-10 0/0:26.0417:7:7:258:0:0:0,-2.10721,-10 0/0:99:39:39:1386:0:0:0,-10,-10 0/0:98.2839:31:31:1114:0:0:0,-9.33193,-10 0/0:99:36:36:1319:0:0:0,-10,-10 0/1:99:40:29:1055:11:392:-10,0,-10 0/0:99:43:43:1554:0:0:0,-10,-10 0/0:47.1138:14:14:499:0:0:0,-4.21442,-10 0/1:99:22:11:417:11:416:-10,0,-10 0/0:59.0717:35:34:1230:1:38:0,-5.19198,-10 0/0:68.1859:21:21:780:0:0:0,-6.32163,-10 0/0:99:52:52:1950:0:0:0,-10,-10 1/1:15.8772:11:0:0:11:407:-10,-3.31133,0 0/1:99:17:8:275:9:333:-10,0,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:99:41:41:1443:0:0:0,-10,-10 1/1:39.9596:19:0:0:19:694:-10,-5.71957,0 0/1:0.195322:6:0:0:6:223:-10,-1.80618,0 1/1:45.9802:21:0:0:21:766:-10,-6.32163,0 1/1:63.9266:44:1:38:43:1566:-10,-7.80187,0 1/1:9.85662:9:0:0:9:335:-10,-2.70927,0 0/1:0.0965631:5:0:0:5:162:-10,-1.50515,0 0/0:80.2271:25:25:928:0:0:0,-7.52575,-10 1/1:33.939:17:0:0:17:636:-10,-5.11751,0 1/1:27.9184:15:0:0:15:556:-10,-4.51545,0 0/1:0.840269:8:0:0:8:301:-10,-2.40824,0 1/1:12.8669:10:0:0:10:366:-10,-3.0103,0 0/0:99:46:46:1662:0:0:0,-10,-10 0/0:68.1859:21:21:761:0:0:0,-6.32163,-10 1/1:67.0523:28:0:0:28:1063:-10,-8.42884,0 1/1:91.135:36:0:0:36:1310:-10,-10,0 1/1:58.0214:25:0:0:25:911:-10,-7.52575,0 0/0:68.1859:21:21:723:0:0:0,-6.32163,-10 1/1:73.0729:30:0:0:30:1099:-10,-9.0309,0 0/0:80.2271:25:25:936:0:0:0,-7.52575,-10 1/1:55.0111:24:0:0:24:908:-10,-7.22472,0 1/1:99:48:0:0:48:1731:-10,-10,0 0/1:99:31:11:408:20:706:-10,0,-10 1/1:45.9802:21:0:0:21:776:-10,-6.32163,0 1/1:99:47:0:0:47:1663:-10,-10,0 1/1:58.0214:25:0:0:25:881:-10,-7.52575,0 1/1:52.0008:23:0:0:23:815:-10,-6.92369,0 1/1:18.8875:12:0:0:12:425:-10,-3.61236,0 0/1:0.840269:8:0:0:8:301:-10,-2.40824,0 0/1:99:44:23:816:21:766:-10,0,-10 0/0:41.0932:12:12:450:0:0:0,-3.61236,-10 0/1:99:21:10:358:11:411:-10,0,-10 0/0:44.1035:13:13:492:0:0:0,-3.91339,-10 0/0:99:33:33:1160:0:0:0,-9.93399,-10 0/0:59.155:18:18:652:0:0:0,-5.41854,-10 0/0:99:37:37:1372:0:0:0,-10,-10 1/1:33.939:17:0:0:17:628:-10,-5.11751,0 0/0:77.3802:41:40:1491:1:38:0,-6.92945,-10 0/0:17.2815:20:19:670:1:38:0,-0.91957,-10 0/0:53.1344:16:16:601:0:0:0,-4.81648,-10 0/0:99:44:44:1570:0:0:0,-10,-10 0/0:74.2065:23:23:837:0:0:0,-6.92369,-10 0/0:38.0829:11:11:416:0:0:0,-3.31133,-10 0/1:99:56:30:1003:26:962:-10,0,-10 0/0:83.2374:26:26:939:0:0:0,-7.82678,-10 0/0:21.9543:22:21:785:1:38:0,-1.48024,-10 0/0:99:38:38:1394:0:0:0,-10,-10 0/0:77.2168:24:24:800:0:0:0,-7.22472,-10 0/0:44.1035:13:13:487:0:0:0,-3.91339,-10 0/0:99:44:44:1588:0:0:0,-10,-10 0/0:47.1138:14:14:529:0:0:0,-4.21442,-10 0/0:74.2065:23:23:817:0:0:0,-6.92369,-10 0/0:68.1859:21:21:785:0:0:0,-6.32163,-10 0/0:23.0314:6:6:195:0:0:0,-1.80618,-10 1/1:45.9802:21:0:0:21:784:-10,-6.32163,0 0/1:99:52:20:695:32:1204:-10,0,-10 0/1:99:36:20:718:16:601:-10,0,-10 0/1:99:31:16:592:15:570:-10,0,-10 0/0:86.2478:27:27:987:0:0:0,-8.12781,-10 0/1:99:28:16:593:12:455:-10,0,-10 1/1:9.85662:9:0:0:9:334:-10,-2.70927,0 0/0:89.2574:28:28:1028:0:0:0,-8.42884,-10 1/1:27.9184:15:0:0:15:559:-10,-4.51545,0 0/1:99:19:13:484:6:222:-10,0,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/0:95.2761:30:30:1065:0:0:0,-9.0309,-10 0/0:92.2687:29:29:995:0:0:0,-8.72987,-10 scaffold_239 65496 . G A 3562.8 . AB=0.454545;ABP=6.56362;AC=10;AF=0.0543478;AN=184;AO=132;CIGAR=1X;DP=2334;DPB=2334;DPRA=1.29903;EPP=3.60252;EPPR=4.08469;GTI=0;LEN=1;MEANALT=1;MQM=59.8939;MQMR=59.8751;NS=92;NUMALT=1;ODDS=0.119619;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4866;QR=79214;RO=2201;RPP=289.645;RPPR=4782.42;RUN=1;SAF=69;SAP=3.60252;SAR=63;SRF=1117;SRP=4.08469;SRR=1084;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:65.5976:16:16:588:0:0:0,-4.81648,-10 0/0:92.6885:25:25:909:0:0:0,-7.52575,-10 0/0:77.6388:20:20:727:0:0:0,-6.0206,-10 0/0:83.6592:22:22:779:0:0:0,-6.62266,-10 0/0:44.5255:9:9:311:0:0:0,-2.70927,-10 0/0:68.6079:17:17:579:0:0:0,-5.11751,-10 0/0:99:39:39:1455:0:0:0,-10,-10 0/0:99:46:46:1575:0:0:0,-10,-10 0/0:98.7111:27:27:975:0:0:0,-8.12781,-10 0/0:38.5049:7:7:236:0:0:0,-2.10721,-10 0/0:56.5667:13:13:487:0:0:0,-3.91339,-10 0/0:38.5049:7:7:259:0:0:0,-2.10721,-10 0/0:99:39:39:1410:0:0:0,-10,-10 0/0:99:31:31:1082:0:0:0,-9.33193,-10 0/0:99:36:36:1293:0:0:0,-10,-10 0/0:99:40:40:1409:0:0:0,-10,-10 0/0:99:43:43:1568:0:0:0,-10,-10 0/0:59.577:14:14:498:0:0:0,-4.21442,-10 0/0:83.6592:22:22:811:0:0:0,-6.62266,-10 0/0:99:35:35:1247:0:0:0,-10,-10 0/1:99:21:12:447:9:338:-10,0,-10 0/0:99:52:52:1896:0:0:0,-10,-10 0/0:50.5461:11:11:409:0:0:0,-3.31133,-10 0/0:68.6079:17:17:614:0:0:0,-5.11751,-10 0/0:90.624:34:33:1245:1:16:0,-7.10354,-10 0/0:88.8834:41:40:1450:1:38:0,-6.92945,-10 0/0:74.6285:19:19:692:0:0:0,-5.71957,-10 0/0:35.4946:6:6:224:0:0:0,-1.80618,-10 0/0:80.6491:21:21:780:0:0:0,-6.32163,-10 0/0:99:44:44:1580:0:0:0,-10,-10 0/0:44.5255:9:9:293:0:0:0,-2.70927,-10 0/0:32.4843:5:5:183:0:0:0,-1.50515,-10 0/0:92.6885:25:25:911:0:0:0,-7.52575,-10 0/0:68.6079:17:17:636:0:0:0,-5.11751,-10 0/0:62.5873:15:15:525:0:0:0,-4.51545,-10 0/0:41.5152:8:8:302:0:0:0,-2.40824,-10 0/0:47.5358:10:10:333:0:0:0,-3.0103,-10 0/0:99:46:46:1583:0:0:0,-10,-10 0/0:80.6491:21:21:783:0:0:0,-6.32163,-10 0/0:99:28:28:1036:0:0:0,-8.42884,-10 0/0:99:36:36:1268:0:0:0,-10,-10 0/0:92.6885:25:25:931:0:0:0,-7.52575,-10 0/0:80.6491:21:21:734:0:0:0,-6.32163,-10 0/0:99:30:30:1098:0:0:0,-9.0309,-10 0/0:92.6885:25:25:931:0:0:0,-7.52575,-10 0/0:89.6791:24:24:895:0:0:0,-7.22472,-10 0/0:99:48:48:1723:0:0:0,-10,-10 0/1:99:31:20:721:11:408:-10,0,-10 0/0:80.6491:21:21:766:0:0:0,-6.32163,-10 0/0:99:47:47:1607:0:0:0,-10,-10 0/0:92.6885:25:25:902:0:0:0,-7.52575,-10 0/0:86.6697:23:23:846:0:0:0,-6.92369,-10 0/0:53.5564:12:12:407:0:0:0,-3.61236,-10 0/0:41.5152:8:8:273:0:0:0,-2.40824,-10 0/1:99:44:21:755:23:859:-10,0,-10 0/0:53.5564:12:12:447:0:0:0,-3.61236,-10 0/0:80.6491:21:21:717:0:0:0,-6.32163,-10 0/0:56.5667:13:13:459:0:0:0,-3.91339,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:71.6182:18:18:611:0:0:0,-5.41854,-10 0/0:99:37:37:1319:0:0:0,-10,-10 0/0:68.6079:17:17:611:0:0:0,-5.11751,-10 0/1:99:41:27:995:14:522:-10,0,-10 0/0:77.6388:20:20:711:0:0:0,-6.0206,-10 0/0:65.5976:16:16:556:0:0:0,-4.81648,-10 0/0:99:44:44:1586:0:0:0,-10,-10 0/1:99:23:5:188:18:680:-10,0,-10 1/1:3.28524:11:0:0:11:413:-10,-3.31133,0 0/0:99:56:56:1969:0:0:0,-10,-10 0/0:95.7007:26:26:972:0:0:0,-7.82678,-10 0/0:83.6592:22:22:824:0:0:0,-6.62266,-10 0/0:99:38:37:1301:1:16:0,-8.25936,-10 0/0:89.6791:24:24:849:0:0:0,-7.22472,-10 0/0:56.5667:13:13:486:0:0:0,-3.91339,-10 0/0:99:44:44:1620:0:0:0,-10,-10 0/0:59.577:14:14:485:0:0:0,-4.21442,-10 0/0:86.6697:23:23:801:0:0:0,-6.92369,-10 0/0:80.6491:21:21:774:0:0:0,-6.32163,-10 0/0:35.4946:6:6:221:0:0:0,-1.80618,-10 0/0:80.6491:21:21:745:0:0:0,-6.32163,-10 0/0:99:52:52:1864:0:0:0,-10,-10 0/0:99:36:36:1336:0:0:0,-10,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:95.7007:27:26:941:0:0:0,-7.82678,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:44.5255:9:9:322:0:0:0,-2.70927,-10 1/1:54.4603:28:0:0:28:1013:-10,-8.42884,0 0/0:62.5873:15:15:561:0:0:0,-4.51545,-10 0/0:74.6285:19:19:655:0:0:0,-5.71957,-10 0/1:99:38:23:845:15:563:-10,0,-10 0/0:99:30:30:1075:0:0:0,-9.0309,-10 0/0:99:29:29:1001:0:0:0,-8.72987,-10 scaffold_239 305019 . C T 380.094 . AB=0.485714;ABP=3.07234;AC=2;AF=0.0108696;AN=184;AO=17;CIGAR=1X;DP=1469;DPB=1469;DPRA=1.09833;EPP=4.1599;EPPR=7.53732;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=8.40164;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=606;QR=52769;RO=1451;RPP=39.9253;RPPR=3153.82;RUN=1;SAF=7;SAP=4.1599;SAR=10;SRF=753;SRP=7.53732;SRR=698;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.5633:10:10:340:0:0:0,-3.0103,-10 0/0:60.5736:11:11:399:0:0:0,-3.31133,-10 0/0:66.5942:13:13:447:0:0:0,-3.91339,-10 0/0:66.5942:13:13:484:0:0:0,-3.91339,-10 0/0:54.553:9:9:313:0:0:0,-2.70927,-10 0/0:54.553:9:9:331:0:0:0,-2.70927,-10 0/1:99:30:18:671:12:439:-10,0,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:66.5942:13:13:486:0:0:0,-3.91339,-10 0/0:39.5015:4:4:150:0:0:0,-1.20412,-10 0/0:54.553:9:9:331:0:0:0,-2.70927,-10 0/0:45.5221:6:6:228:0:0:0,-1.80618,-10 0/0:99:31:31:1121:0:0:0,-9.33193,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:93.6872:22:22:764:0:0:0,-6.62266,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/0:75.6251:16:16:545:0:0:0,-4.81648,-10 0/0:63.5839:12:12:424:0:0:0,-3.61236,-10 0/0:87.6658:20:20:755:0:0:0,-6.0206,-10 0/0:99:35:35:1316:0:0:0,-10,-10 0/0:84.6558:19:19:688:0:0:0,-5.71957,-10 0/0:87.6658:20:20:758:0:0:0,-6.0206,-10 0/0:60.5736:11:11:416:0:0:0,-3.31133,-10 0/0:66.5942:13:13:485:0:0:0,-3.91339,-10 0/0:99:26:26:969:0:0:0,-7.82678,-10 0/0:60.5736:11:11:394:0:0:0,-3.31133,-10 0/0:60.5736:11:11:417:0:0:0,-3.31133,-10 0/0:60.5736:11:11:403:0:0:0,-3.31133,-10 0/0:69.6045:14:14:516:0:0:0,-4.21442,-10 0/0:99:25:25:889:0:0:0,-7.52575,-10 0/0:54.553:9:9:342:0:0:0,-2.70927,-10 0/0:51.5427:8:8:294:0:0:0,-2.40824,-10 0/0:75.6251:16:16:583:0:0:0,-4.81648,-10 0/0:69.6045:14:14:498:0:0:0,-4.21442,-10 0/0:84.6558:20:19:718:0:0:0,-5.71957,-10 0/0:51.5427:8:8:298:0:0:0,-2.40824,-10 0/0:51.5427:8:8:297:0:0:0,-2.40824,-10 0/0:99:24:24:840:0:0:0,-7.22472,-10 0/0:48.5324:7:7:203:0:0:0,-2.10721,-10 0/0:66.5942:13:13:451:0:0:0,-3.91339,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:93.6872:22:22:805:0:0:0,-6.62266,-10 0/0:81.6456:18:18:629:0:0:0,-5.41854,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:63.5839:12:12:443:0:0:0,-3.61236,-10 0/0:72.6148:15:15:562:0:0:0,-4.51545,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:90.6756:21:21:753:0:0:0,-6.32163,-10 0/0:66.5942:13:13:440:0:0:0,-3.91339,-10 0/0:99:26:26:960:0:0:0,-7.82678,-10 0/0:60.5736:11:11:389:0:0:0,-3.31133,-10 0/0:99:25:25:920:0:0:0,-7.52575,-10 0/0:54.553:9:9:303:0:0:0,-2.70927,-10 0/0:48.5324:7:7:266:0:0:0,-2.10721,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:69.6045:14:14:499:0:0:0,-4.21442,-10 0/0:75.6251:16:16:577:0:0:0,-4.81648,-10 0/0:60.5736:11:11:384:0:0:0,-3.31133,-10 0/0:51.5427:8:8:257:0:0:0,-2.40824,-10 0/0:51.5427:8:8:304:0:0:0,-2.40824,-10 0/0:99:28:28:1049:0:0:0,-8.42884,-10 0/0:54.553:9:9:296:0:0:0,-2.70927,-10 0/0:84.6558:19:19:704:0:0:0,-5.71957,-10 0/0:63.5839:12:12:430:0:0:0,-3.61236,-10 0/1:2.27142e-06:5:0:0:5:167:-10,-1.50515,0 0/0:99:24:24:885:0:0:0,-7.22472,-10 0/0:72.6148:15:15:559:0:0:0,-4.51545,-10 0/0:51.5427:8:8:298:0:0:0,-2.40824,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:60.5736:11:11:414:0:0:0,-3.31133,-10 0/0:72.6148:15:15:515:0:0:0,-4.51545,-10 0/0:99:25:25:903:0:0:0,-7.52575,-10 0/0:87.6658:20:20:738:0:0:0,-6.0206,-10 0/0:66.5942:13:13:475:0:0:0,-3.91339,-10 0/0:99:24:24:833:0:0:0,-7.22472,-10 0/0:81.6456:18:18:669:0:0:0,-5.41854,-10 0/0:81.6456:18:18:614:0:0:0,-5.41854,-10 0/0:36.4912:3:3:114:0:0:0,-0.90309,-10 0/0:39.5015:4:4:152:0:0:0,-1.20412,-10 0/0:45.5221:6:6:210:0:0:0,-1.80618,-10 0/0:90.6756:21:21:764:0:0:0,-6.32163,-10 0/0:81.6456:18:18:655:0:0:0,-5.41854,-10 0/0:87.6658:20:20:749:0:0:0,-6.0206,-10 0/0:93.6872:22:22:795:0:0:0,-6.62266,-10 0/0:75.6251:16:16:583:0:0:0,-4.81648,-10 0/0:42.5118:5:5:190:0:0:0,-1.50515,-10 0/0:66.5942:13:13:494:0:0:0,-3.91339,-10 0/0:75.6251:16:16:544:0:0:0,-4.81648,-10 0/0:39.5015:4:4:146:0:0:0,-1.20412,-10 0/0:69.6045:14:14:529:0:0:0,-4.21442,-10 0/0:99:24:24:846:0:0:0,-7.22472,-10 0/0:66.5942:13:13:492:0:0:0,-3.91339,-10 scaffold_239 487779 . C A 371.171 . AB=0.571429;ABP=4.25114;AC=2;AF=0.010989;AN=182;AO=16;CIGAR=1X;DP=1100;DPB=1100;DPRA=1.16231;EPP=7.89611;EPPR=8.01831;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9935;NS=91;NUMALT=1;ODDS=5.45445;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=594;QR=39771;RO=1084;RPP=37.7539;RPPR=2356.89;RUN=1;SAF=11;SAP=7.89611;SAR=5;SRF=517;SRP=8.01831;SRR=567;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.8508:10:10:351:0:0:0,-3.0103,-10 0/0:38.8096:6:6:228:0:0:0,-1.80618,-10 0/0:44.8302:8:8:300:0:0:0,-2.40824,-10 0/0:50.8508:10:10:370:0:0:0,-3.0103,-10 0/0:38.8096:6:6:206:0:0:0,-1.80618,-10 0/0:47.8405:9:9:336:0:0:0,-2.70927,-10 0/0:74.9332:18:18:656:0:0:0,-5.41854,-10 0/0:74.9332:18:18:667:0:0:0,-5.41854,-10 0/0:47.8405:9:9:330:0:0:0,-2.70927,-10 .:.:.:.:.:.:.:. 0/0:29.7787:3:3:114:0:0:0,-0.90309,-10 0/0:29.7787:3:3:114:0:0:0,-0.90309,-10 0/0:71.9229:17:17:600:0:0:0,-5.11751,-10 0/0:96.0057:25:25:928:0:0:0,-7.52575,-10 0/0:80.9538:20:20:737:0:0:0,-6.0206,-10 0/0:71.9229:17:17:624:0:0:0,-5.11751,-10 0/0:71.9229:17:17:623:0:0:0,-5.11751,-10 0/0:38.8096:6:6:227:0:0:0,-1.80618,-10 0/0:68.9126:16:16:595:0:0:0,-4.81648,-10 0/0:62.892:14:14:526:0:0:0,-4.21442,-10 0/0:62.892:14:14:508:0:0:0,-4.21442,-10 0/0:71.9229:17:17:613:0:0:0,-5.11751,-10 0/0:53.8611:11:11:403:0:0:0,-3.31133,-10 0/0:65.9023:15:15:561:0:0:0,-4.51545,-10 0/0:50.8508:10:10:370:0:0:0,-3.0103,-10 0/0:56.8714:12:12:438:0:0:0,-3.61236,-10 0/0:47.8405:9:9:306:0:0:0,-2.70927,-10 0/0:53.8611:11:11:369:0:0:0,-3.31133,-10 0/0:59.8817:13:13:477:0:0:0,-3.91339,-10 0/0:77.9435:19:19:711:0:0:0,-5.71957,-10 0/0:23.7581:1:1:38:0:0:0,-0.30103,-3.8 0/0:26.7684:2:2:74:0:0:0,-0.60206,-7.03 0/0:41.8199:7:7:266:0:0:0,-2.10721,-10 0/0:32.789:4:4:150:0:0:0,-1.20412,-10 0/0:47.8405:9:9:318:0:0:0,-2.70927,-10 0/0:35.7993:5:5:187:0:0:0,-1.50515,-10 0/0:59.8817:13:13:475:0:0:0,-3.91339,-10 0/0:56.8714:12:12:447:0:0:0,-3.61236,-10 0/0:35.7993:5:5:168:0:0:0,-1.50515,-10 0/0:50.8508:10:10:378:0:0:0,-3.0103,-10 0/0:77.9435:19:19:668:0:0:0,-5.71957,-10 0/0:62.892:14:14:525:0:0:0,-4.21442,-10 0/0:53.8611:11:11:396:0:0:0,-3.31133,-10 0/0:74.9332:18:18:660:0:0:0,-5.41854,-10 0/1:99:10:6:218:4:140:-10,0,-10 0/0:44.8302:8:8:299:0:0:0,-2.40824,-10 0/0:99:28:28:1033:0:0:0,-8.42884,-10 0/0:68.9126:16:16:608:0:0:0,-4.81648,-10 0/0:44.8302:8:8:296:0:0:0,-2.40824,-10 0/0:80.9538:20:20:732:0:0:0,-6.0206,-10 0/0:44.8302:8:8:288:0:0:0,-2.40824,-10 0/0:89.9843:23:23:819:0:0:0,-6.92369,-10 0/0:44.8302:8:8:260:0:0:0,-2.40824,-10 0/0:29.7787:3:3:114:0:0:0,-0.90309,-10 0/0:74.9332:18:18:627:0:0:0,-5.41854,-10 0/0:53.8611:11:11:413:0:0:0,-3.31133,-10 0/0:59.8817:13:13:479:0:0:0,-3.91339,-10 0/0:44.8302:8:8:301:0:0:0,-2.40824,-10 0/0:56.8714:12:12:443:0:0:0,-3.61236,-10 0/0:62.892:14:14:503:0:0:0,-4.21442,-10 0/1:99:18:6:202:12:454:-10,0,-10 0/0:53.8611:11:11:390:0:0:0,-3.31133,-10 0/0:92.9942:24:24:865:0:0:0,-7.22472,-10 0/0:71.9229:17:17:615:0:0:0,-5.11751,-10 0/0:38.8096:6:6:228:0:0:0,-1.80618,-10 0/0:86.9742:22:22:818:0:0:0,-6.62266,-10 0/0:53.8611:11:11:414:0:0:0,-3.31133,-10 0/0:38.8096:6:6:224:0:0:0,-1.80618,-10 0/0:92.9942:24:24:903:0:0:0,-7.22472,-10 0/0:50.8508:10:10:378:0:0:0,-3.0103,-10 0/0:68.9126:16:16:604:0:0:0,-4.81648,-10 0/0:65.9023:15:15:567:0:0:0,-4.51545,-10 0/0:53.8611:11:11:394:0:0:0,-3.31133,-10 0/0:80.9538:20:20:753:0:0:0,-6.0206,-10 0/0:74.9332:18:18:681:0:0:0,-5.41854,-10 0/0:35.7993:5:5:185:0:0:0,-1.50515,-10 0/0:38.8096:6:6:204:0:0:0,-1.80618,-10 0/0:59.8817:13:13:493:0:0:0,-3.91339,-10 0/0:29.7787:3:3:109:0:0:0,-0.90309,-10 0/0:32.789:4:4:147:0:0:0,-1.20412,-10 0/0:89.9843:23:23:825:0:0:0,-6.92369,-10 0/0:59.8817:13:13:491:0:0:0,-3.91339,-10 0/0:86.9742:22:22:826:0:0:0,-6.62266,-10 0/0:59.8817:13:13:486:0:0:0,-3.91339,-10 0/0:56.8714:12:12:439:0:0:0,-3.61236,-10 0/0:26.7684:2:2:71:0:0:0,-0.60206,-6.745 0/0:41.8199:7:7:220:0:0:0,-2.10721,-10 0/0:47.8405:9:9:341:0:0:0,-2.70927,-10 0/0:38.8096:6:6:224:0:0:0,-1.80618,-10 0/0:59.8817:13:13:485:0:0:0,-3.91339,-10 0/0:53.8611:11:11:418:0:0:0,-3.31133,-10 0/0:44.8302:8:8:300:0:0:0,-2.40824,-10 scaffold_239 497475 . C G 1495.65 . AB=0.753086;ABP=48.0751;AC=6;AF=0.0326087;AN=184;AO=61;CIGAR=1X;DP=1413;DPB=1413;DPRA=0.871622;EPP=5.89373;EPPR=7.03751;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9421;NS=92;NUMALT=1;ODDS=0.446796;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2199;QR=49091;RO=1348;RPP=135.47;RPPR=2767.45;RUN=1;SAF=35;SAP=5.89373;SAR=26;SRF=668;SRP=3.24227;SRR=680;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:33.8687:7:7:243:0:0:0,-2.10721,-10 0/0:51.9305:13:13:483:0:0:0,-3.91339,-10 0/0:45.9099:11:11:408:0:0:0,-3.31133,-10 0/0:48.9202:12:12:446:0:0:0,-3.61236,-10 0/0:30.8584:6:6:228:0:0:0,-1.80618,-10 0/0:51.9305:13:13:482:0:0:0,-3.91339,-10 0/0:94.0735:27:27:993:0:0:0,-8.12781,-10 0/0:94.0735:27:27:962:0:0:0,-8.12781,-10 0/0:54.9408:14:14:528:0:0:0,-4.21442,-10 0/0:27.8481:5:5:148:0:0:0,-1.50515,-10 0/0:30.8584:6:6:202:0:0:0,-1.80618,-10 0/0:30.8584:6:6:228:0:0:0,-1.80618,-10 0/0:94.0735:27:27:972:0:0:0,-8.12781,-10 0/0:94.0735:27:27:1016:0:0:0,-8.12781,-10 0/0:76.0129:21:21:787:0:0:0,-6.32163,-10 0/0:99:29:29:1062:0:0:0,-8.72987,-10 0/0:76.0129:21:21:686:0:0:0,-6.32163,-10 0/0:30.8584:6:6:227:0:0:0,-1.80618,-10 0/0:57.9511:15:15:502:0:0:0,-4.51545,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:45.9099:11:11:410:0:0:0,-3.31133,-10 0/0:97.0825:28:28:1004:0:0:0,-8.42884,-10 0/0:54.9408:14:14:499:0:0:0,-4.21442,-10 0/0:69.9923:19:19:710:0:0:0,-5.71957,-10 0/0:73.0026:20:20:703:0:0:0,-6.0206,-10 0/0:91.0638:26:26:973:0:0:0,-7.82678,-10 0/0:39.8893:9:9:342:0:0:0,-2.70927,-10 0/0:54.9408:14:14:479:0:0:0,-4.21442,-10 0/0:51.9305:13:13:459:0:0:0,-3.91339,-10 0/0:69.9923:19:19:711:0:0:0,-5.71957,-10 0/0:24.8378:4:4:129:0:0:0,-1.20412,-10 0/0:27.8481:5:5:186:0:0:0,-1.50515,-10 0/0:69.9923:19:19:686:0:0:0,-5.71957,-10 0/0:30.8584:6:6:219:0:0:0,-1.80618,-10 0/1:1.85645:15:0:0:15:555:-10,-4.51545,0 0/1:0.00147549:5:0:0:5:180:-10,-1.50515,0 0/0:45.9099:11:11:403:0:0:0,-3.31133,-10 0/0:66.982:18:18:658:0:0:0,-5.41854,-10 0/0:60.9614:16:16:598:0:0:0,-4.81648,-10 0/1:99:11:4:139:7:234:-10,0,-10 0/0:76.0129:21:21:781:0:0:0,-6.32163,-10 0/0:45.9099:11:11:387:0:0:0,-3.31133,-10 0/0:63.9717:17:17:608:0:0:0,-5.11751,-10 0/1:99:24:9:337:15:529:-10,0,-10 0/0:45.9099:11:11:416:0:0:0,-3.31133,-10 0/0:48.9202:12:12:456:0:0:0,-3.61236,-10 0/0:99:30:30:1045:0:0:0,-9.0309,-10 0/0:85.0437:24:24:910:0:0:0,-7.22472,-10 0/0:73.0026:20:20:739:0:0:0,-6.0206,-10 0/0:99:33:33:1231:0:0:0,-9.93399,-10 0/0:42.8996:11:10:380:0:0:0,-3.0103,-10 0/0:69.9923:20:19:721:0:0:0,-5.71957,-10 0/0:39.8893:9:9:341:0:0:0,-2.70927,-10 0/0:27.8481:5:5:185:0:0:0,-1.50515,-10 0/0:99:33:32:1178:0:0:0,-9.63296,-10 0/0:36.879:8:8:292:0:0:0,-2.40824,-10 0/0:42.8996:10:10:379:0:0:0,-3.0103,-10 0/0:45.9099:11:11:375:0:0:0,-3.31133,-10 0/0:33.8687:7:7:255:0:0:0,-2.10721,-10 0/0:45.9099:11:11:393:0:0:0,-3.31133,-10 0/0:54.9408:14:14:519:0:0:0,-4.21442,-10 0/0:42.8996:10:10:355:0:0:0,-3.0103,-10 0/0:97.0825:28:28:950:0:0:0,-8.42884,-10 0/0:48.9202:12:12:448:0:0:0,-3.61236,-10 0/1:0.395101:13:0:0:13:487:-10,-3.91339,0 0/0:79.0232:22:22:821:0:0:0,-6.62266,-10 0/1:99:13:7:261:6:214:-10,0,-10 0/0:24.8378:4:4:152:0:0:0,-1.20412,-10 0/0:79.0232:22:22:773:0:0:0,-6.62266,-10 0/0:45.9099:11:11:410:0:0:0,-3.31133,-10 0/0:33.8687:7:7:255:0:0:0,-2.10721,-10 0/0:97.0825:28:28:1035:0:0:0,-8.42884,-10 0/0:66.982:18:18:677:0:0:0,-5.41854,-10 0/0:45.9099:11:11:372:0:0:0,-3.31133,-10 0/0:82.0335:23:23:822:0:0:0,-6.92369,-10 0/0:48.9202:12:12:433:0:0:0,-3.61236,-10 0/0:57.9511:15:15:547:0:0:0,-4.51545,-10 0/0:45.9099:12:11:416:0:0:0,-3.31133,-10 0/0:27.8481:5:5:190:0:0:0,-1.50515,-10 0/0:42.8996:10:10:356:0:0:0,-3.0103,-10 0/0:97.0825:28:28:990:0:0:0,-8.42884,-10 0/0:73.0026:20:20:721:0:0:0,-6.0206,-10 0/0:73.0026:20:20:735:0:0:0,-6.0206,-10 0/0:66.982:18:18:641:0:0:0,-5.41854,-10 0/0:60.9614:16:16:577:0:0:0,-4.81648,-10 0/0:33.8687:7:7:256:0:0:0,-2.10721,-10 0/0:51.9305:13:13:468:0:0:0,-3.91339,-10 0/0:48.9202:12:12:451:0:0:0,-3.61236,-10 0/0:30.8584:6:6:228:0:0:0,-1.80618,-10 0/0:69.9923:19:19:686:0:0:0,-5.71957,-10 0/0:73.0026:20:20:732:0:0:0,-6.0206,-10 0/0:33.8687:7:7:266:0:0:0,-2.10721,-10 scaffold_239 507681 . C G 3759.36 . AB=0.555556;ABP=7.59452;AC=13;AF=0.0714286;AN=182;AO=145;CIGAR=1X;DP=1825;DPB=1825;DPRA=1.15976;EPP=9.61457;EPPR=3.07367;GTI=1;LEN=1;MEANALT=1;MQM=57.3931;MQMR=59.5706;NS=91;NUMALT=1;ODDS=0.0148693;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5186;QR=60550;RO=1679;RPP=317.874;RPPR=3571.16;RUN=1;SAF=83;SAP=9.61457;SAR=62;SRF=842;SRP=3.04263;SRR=837;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.5165:10:10:357:0:0:0,-3.0103,-10 0/0:28.4547:4:4:148:0:0:0,-1.20412,-10 0/0:99:29:29:1000:0:0:0,-8.72987,-10 0/0:67.5886:17:17:595:0:0:0,-5.11751,-10 0/0:58.5577:14:14:471:0:0:0,-4.21442,-10 .:.:.:.:.:.:.:. 0/0:99:39:39:1428:0:0:0,-10,-10 0/0:88.6605:24:24:823:0:0:0,-7.22472,-10 1/1:32.1161:19:0:0:19:684:-10,-5.71957,0 0/0:28.4547:4:4:151:0:0:0,-1.20412,-10 0/0:31.465:5:5:162:0:0:0,-1.50515,-10 0/0:34.4753:6:6:214:0:0:0,-1.80618,-10 0/0:73.6092:19:19:668:0:0:0,-5.71957,-10 0/0:99:32:32:1164:0:0:0,-9.63296,-10 0/0:99:33:33:1192:0:0:0,-9.93399,-10 0/0:91.6706:25:25:915:0:0:0,-7.52575,-10 0/0:91.6706:25:25:891:0:0:0,-7.52575,-10 1/1:20.0749:15:0:0:15:541:-10,-4.51545,0 0/0:97.6902:27:27:988:0:0:0,-8.12781,-10 0/0:99:50:50:1767:0:0:0,-10,-10 0/0:73.6092:19:19:710:0:0:0,-5.71957,-10 0/0:99:31:31:1167:0:0:0,-9.33193,-10 0/0:49.5268:12:11:407:0:0:0,-3.31133,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:67.5886:17:17:619:0:0:0,-5.11751,-10 0/0:76.6195:20:20:731:0:0:0,-6.0206,-10 0/0:73.6092:19:19:669:0:0:0,-5.71957,-10 0/1:79.3181:11:1:37:10:369:-10,0,-1.43006 0/0:64.5783:16:16:603:0:0:0,-4.81648,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:34.4753:6:6:218:0:0:0,-1.80618,-10 0/0:40.4959:8:8:267:0:0:0,-2.40824,-10 0/0:61.568:15:15:551:0:0:0,-4.51545,-10 0/0:40.4959:8:8:265:0:0:0,-2.40824,-10 0/0:88.6605:24:24:857:0:0:0,-7.22472,-10 0/0:55.5474:13:13:480:0:0:0,-3.91339,-10 0/0:52.5371:12:12:438:0:0:0,-3.61236,-10 0/0:99:29:29:1061:0:0:0,-8.72987,-10 0/0:73.6092:19:19:653:0:0:0,-5.71957,-10 0/0:85.6503:23:23:820:0:0:0,-6.92369,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:73.6092:19:19:677:0:0:0,-5.71957,-10 0/0:61.568:15:15:540:0:0:0,-4.51545,-10 0/0:76.6195:20:20:750:0:0:0,-6.0206,-10 0/0:94.6806:26:26:971:0:0:0,-7.82678,-10 0/1:99:19:11:372:8:292:-10,0,-10 0/1:99:36:16:560:20:737:-10,0,-10 0/0:91.6706:25:25:912:0:0:0,-7.52575,-10 0/0:55.5474:13:13:455:0:0:0,-3.91339,-10 0/0:83.1469:31:30:1106:1:16:0,-6.24057,-10 0/0:34.4753:6:6:224:0:0:0,-1.80618,-10 0/0:99:31:31:1153:0:0:0,-9.33193,-10 0/0:58.5577:14:14:508:0:0:0,-4.21442,-10 0/0:37.4856:7:7:264:0:0:0,-2.10721,-10 0/1:99:36:23:819:13:478:-10,0,-10 0/0:67.5886:17:17:569:0:0:0,-5.11751,-10 0/0:79.6297:21:21:767:0:0:0,-6.32163,-10 0/0:40.4959:8:8:262:0:0:0,-2.40824,-10 0/0:58.5577:14:14:531:0:0:0,-4.21442,-10 1/1:20.0749:15:0:0:15:523:-10,-4.51545,0 0/0:99:45:45:1556:0:0:0,-10,-10 0/0:76.6195:20:20:710:0:0:0,-6.0206,-10 0/0:99:30:30:1076:0:0:0,-9.0309,-10 0/0:52.5371:12:12:451:0:0:0,-3.61236,-10 0/0:67.5886:17:17:588:0:0:0,-5.11751,-10 0/0:85.6503:23:23:843:0:0:0,-6.92369,-10 0/0:97.6902:27:27:930:0:0:0,-8.12781,-10 0/0:55.5474:13:13:485:0:0:0,-3.91339,-10 0/0:99:40:40:1458:0:0:0,-10,-10 0/0:49.5268:11:11:401:0:0:0,-3.31133,-10 0/0:67.5886:17:17:606:0:0:0,-5.11751,-10 0/1:99:35:17:640:18:641:-10,0,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:76.6195:20:20:697:0:0:0,-6.0206,-10 0/0:85.6503:23:23:823:0:0:0,-6.92369,-10 0/0:31.465:5:5:188:0:0:0,-1.50515,-10 0/0:61.568:15:15:558:0:0:0,-4.51545,-10 0/0:67.5886:17:17:638:0:0:0,-5.11751,-10 0/0:34.4753:6:6:224:0:0:0,-1.80618,-10 0/0:52.5371:12:12:447:0:0:0,-3.61236,-10 0/0:99:38:38:1357:0:0:0,-10,-10 0/0:99:29:29:1034:0:0:0,-8.72987,-10 0/0:85.6503:23:23:861:0:0:0,-6.92369,-10 0/0:76.6195:20:20:721:0:0:0,-6.0206,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:37.4856:7:7:232:0:0:0,-2.10721,-10 0/0:85.6503:23:23:806:0:0:0,-6.92369,-10 0/0:55.5474:13:13:456:0:0:0,-3.91339,-10 0/0:40.4959:8:8:292:0:0:0,-2.40824,-10 0/1:99:20:8:276:12:424:-10,0,-10 0/0:61.568:15:15:567:0:0:0,-4.51545,-10 0/1:2.86504:14:0:0:14:481:-10,-4.21442,0 scaffold_239 552911 . T C 4695.72 . AB=0.465241;ABP=4.97275;AC=14;AF=0.076087;AN=184;AO=169;CIGAR=1X;DP=2222;DPB=2222;DPRA=1.21633;EPP=3.33152;EPPR=10.4844;GTI=0;LEN=1;MEANALT=1;MQM=59.9882;MQMR=59.9498;NS=92;NUMALT=1;ODDS=0.394132;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6236;QR=75194;RO=2050;RPP=327.845;RPPR=4206.2;RUN=1;SAF=81;SAP=3.6399;SAR=88;SRF=974;SRP=14.0308;SRR=1076;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:4.15478:22:1:16:21:785:-10,-3.68024,0 0/0:33.0533:7:7:265:0:0:0,-2.10721,-10 0/0:99:29:29:1039:0:0:0,-8.72987,-10 0/0:48.1048:12:12:455:0:0:0,-3.61236,-10 0/0:48.1048:12:12:448:0:0:0,-3.61236,-10 0/0:54.1254:14:14:502:0:0:0,-4.21442,-10 0/0:99:44:44:1623:0:0:0,-10,-10 0/0:90.2492:26:26:939:0:0:0,-7.82678,-10 1/1:19.0166:18:0:0:18:681:-10,-5.41854,0 0/0:33.0533:7:7:242:0:0:0,-2.10721,-10 0/0:54.1254:14:14:532:0:0:0,-4.21442,-10 0/0:33.0533:7:7:266:0:0:0,-2.10721,-10 0/1:99:26:17:618:9:337:-10,0,-10 0/0:98.0942:46:45:1645:1:38:0,-8.38462,-10 0/1:99:24:14:517:10:362:-10,0,-10 0/0:81.218:23:23:860:0:0:0,-6.92369,-10 0/0:99:36:36:1354:0:0:0,-10,-10 0/0:57.1357:15:15:528:0:0:0,-4.51545,-10 0/0:78.2078:22:22:815:0:0:0,-6.62266,-10 0/0:99:58:58:2138:0:0:0,-10,-10 0/0:69.1769:19:19:655:0:0:0,-5.71957,-10 0/0:99:40:40:1486:0:0:0,-10,-10 0/0:45.0945:11:11:408:0:0:0,-3.31133,-10 0/0:69.1769:19:19:692:0:0:0,-5.71957,-10 1/1:40.0887:25:0:0:25:932:-10,-7.52575,0 0/0:84.2285:24:24:863:0:0:0,-7.22472,-10 0/0:96.266:28:28:1052:0:0:0,-8.42884,-10 0/0:54.1254:14:14:521:0:0:0,-4.21442,-10 0/0:99:31:31:1125:0:0:0,-9.33193,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:24.0224:5:4:139:0:0:0,-1.20412,-10 0/0:57.1357:15:15:536:0:0:0,-4.51545,-10 0/0:90.2492:26:26:967:0:0:0,-7.82678,-10 0/0:42.0842:10:10:373:0:0:0,-3.0103,-10 0/0:99:32:32:1133:0:0:0,-9.63296,-10 0/0:42.0842:10:10:378:0:0:0,-3.0103,-10 0/0:45.0945:11:11:409:0:0:0,-3.31133,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:90.2492:26:26:973:0:0:0,-7.82678,-10 0/0:78.2078:22:22:836:0:0:0,-6.62266,-10 0/0:99:57:57:2098:0:0:0,-10,-10 0/0:63.1563:17:17:643:0:0:0,-5.11751,-10 0/0:66.1666:18:18:669:0:0:0,-5.41854,-10 0/0:99:39:39:1402:0:0:0,-10,-10 0/0:90.2492:26:26:972:0:0:0,-7.82678,-10 0/1:99:21:11:416:10:379:-10,0,-10 0/1:99:45:22:835:23:825:-10,0,-10 0/0:99:38:38:1439:0:0:0,-10,-10 0/0:63.1563:17:17:635:0:0:0,-5.11751,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:60.146:16:16:598:0:0:0,-4.81648,-10 0/0:99:50:48:1691:0:0:0,-10,-10 0/0:90.2492:26:26:913:0:0:0,-7.82678,-10 0/0:42.0842:10:10:358:0:0:0,-3.0103,-10 0/1:99:60:35:1269:25:940:-10,0,-10 0/0:81.218:23:23:798:0:0:0,-6.92369,-10 0/0:99:36:36:1291:0:0:0,-10,-10 0/1:59.6235:11:1:38:10:367:-10,0,-1.53006 0/0:87.2388:25:25:920:0:0:0,-7.52575,-10 1/1:16.0063:17:0:0:17:590:-10,-5.11751,0 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:72.1872:20:20:734:0:0:0,-6.0206,-10 0/0:99:49:49:1820:0:0:0,-10,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:72.1872:20:20:754:0:0:0,-6.0206,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/0:78.2078:22:22:800:0:0:0,-6.62266,-10 0/0:39.0739:9:9:339:0:0:0,-2.70927,-10 0/0:99:33:33:1240:0:0:0,-9.93399,-10 0/0:33.0533:7:7:263:0:0:0,-2.10721,-10 0/0:57.1357:15:15:564:0:0:0,-4.51545,-10 0/0:99:39:39:1374:0:0:0,-10,-10 0/0:81.218:23:23:857:0:0:0,-6.92369,-10 0/0:72.1872:20:20:717:0:0:0,-6.0206,-10 0/0:99:36:36:1326:0:0:0,-10,-10 0/0:90.2492:26:26:953:0:0:0,-7.82678,-10 0/0:72.1872:20:20:736:0:0:0,-6.0206,-10 0/0:54.1254:14:14:520:0:0:0,-4.21442,-10 0/0:33.0533:7:7:266:0:0:0,-2.10721,-10 0/0:36.0636:8:8:293:0:0:0,-2.40824,-10 0/0:99:49:49:1779:0:0:0,-10,-10 0/0:99:41:41:1489:0:0:0,-10,-10 0/0:90.2492:26:26:957:0:0:0,-7.82678,-10 0/0:63.1563:17:17:623:0:0:0,-5.11751,-10 0/0:93.2575:27:27:1017:0:0:0,-8.12781,-10 0/0:36.0636:8:8:303:0:0:0,-2.40824,-10 0/0:84.2285:24:24:893:0:0:0,-7.22472,-10 0/0:60.146:16:16:603:0:0:0,-4.81648,-10 0/0:30.043:6:6:228:0:0:0,-1.80618,-10 0/0:75.1975:21:21:775:0:0:0,-6.32163,-10 0/0:84.2285:24:24:889:0:0:0,-7.22472,-10 0/0:69.1769:19:19:700:0:0:0,-5.71957,-10 scaffold_239 556609 . CTGTCCTGAGG C 108.785 . AB=0.4;ABP=4.31318;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1M10D1M;DP=1352;DPB=1348.42;DPRA=1.02094;EPP=3.0103;EPPR=8.89682;GTI=0;LEN=10;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=9.71911;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=143;PRO=4;QA=214;QR=48717;RO=1328;RPP=16.0391;RPPR=2826.24;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=641;SRP=6.47027;SRR=687;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:90.3746:17:17:635:0:0:0,-5.11751,-10 0|0:75.3236:12:12:424:0:0:0,-3.61236,-10 0|0:96.3937:19:19:684:0:0:0,-5.71957,-10 0|0:96.3937:19:19:695:0:0:0,-5.71957,-10 0|0:72.3133:11:11:401:0:0:0,-3.31133,-10 0|0:60.2721:7:7:245:0:0:0,-2.10721,-10 0|0:90.3746:18:17:637:0:0:0,-5.11751,-10 0|0:96.3937:19:19:708:0:0:0,-5.71957,-10 0|0:60.2721:7:7:262:0:0:0,-2.10721,-10 0|0:45.2206:2:2:75:0:0:0,-0.60206,-7.125 0|0:57.2618:6:6:220:0:0:0,-1.80618,-10 0|0:54.2515:5:5:188:0:0:0,-1.50515,-10 0|0:99:21:20:725:0:0:0,-6.0206,-10 0|0:99:24:24:878:0:0:0,-7.22472,-10 0|0:99:24:24:883:0:0:0,-7.22472,-10 0|0:99:22:22:809:0:0:0,-6.62266,-10 0|0:87.3645:16:16:587:0:0:0,-4.81648,-10 0|0:57.2618:7:6:212:0:0:0,-1.80618,-10 0|0:93.3844:19:18:665:0:0:0,-5.41854,-10 0|0:99:35:34:1220:0:0:0,-10,-10 0|0:72.3133:11:11:405:0:0:0,-3.31133,-10 0|0:99:22:22:819:0:0:0,-6.62266,-10 0|0:66.2927:9:9:330:0:0:0,-2.70927,-10 0|0:93.3844:18:18:667:0:0:0,-5.41854,-10 0|0:90.3746:17:17:636:0:0:0,-5.11751,-10 0|0:99:21:21:755:0:0:0,-6.32163,-10 0|0:84.3544:15:15:556:0:0:0,-4.51545,-10 0|0:66.2927:10:9:325:0:0:0,-2.70927,-10 0|0:90.3746:17:17:641:0:0:0,-5.11751,-10 0|0:99:28:27:991:0:0:0,-8.12781,-10 0|0:54.2515:5:5:186:0:0:0,-1.50515,-10 0|0:66.2927:9:9:336:0:0:0,-2.70927,-10 0|0:84.3544:16:15:559:0:0:0,-4.51545,-10 0|0:57.2618:6:6:225:0:0:0,-1.80618,-10 0|0:87.3645:16:16:584:0:0:0,-4.81648,-10 0|0:48.2309:3:3:111:0:0:0,-0.90309,-10 0|0:69.303:10:10:376:0:0:0,-3.0103,-10 0|0:99:22:22:820:0:0:0,-6.62266,-10 0|0:93.3844:18:18:652:0:0:0,-5.41854,-10 0|0:60.2721:7:7:263:0:0:0,-2.10721,-10 0|0:99:22:22:809:0:0:0,-6.62266,-10 0|0:69.303:10:10:362:0:0:0,-3.0103,-10 0|0:81.3441:15:14:520:0:0:0,-4.21442,-10 0|0:99:25:25:918:0:0:0,-7.52575,-10 0|0:84.3544:15:15:539:0:0:0,-4.51545,-10 0|0:69.303:10:10:362:0:0:0,-3.0103,-10 0|0:96.3937:21:19:680:0:0:0,-5.71957,-10 0|0:99:21:21:765:0:0:0,-6.32163,-10 0|0:60.2721:7:7:264:0:0:0,-2.10721,-10 0|0:99:36:36:1298:0:0:0,-10,-10 0|0:54.2515:5:5:185:0:0:0,-1.50515,-10 0|0:99:29:28:1014:0:0:0,-8.42884,-10 0|0:66.2927:9:9:334:0:0:0,-2.70927,-10 0|0:57.2618:6:6:220:0:0:0,-1.80618,-10 0|0:99:40:40:1469:0:0:0,-10,-10 0|0:60.2721:7:7:250:0:0:0,-2.10721,-10 0|0:99:20:20:707:0:0:0,-6.0206,-10 0|0:63.2824:8:8:300:0:0:0,-2.40824,-10 0|0:57.2618:6:6:214:0:0:0,-1.80618,-10 0|0:54.2515:5:5:186:0:0:0,-1.50515,-10 0|0:87.3645:16:16:590:0:0:0,-4.81648,-10 0|0:75.3236:12:12:436:0:0:0,-3.61236,-10 0|0:78.3339:13:13:475:0:0:0,-3.91339,-10 0|0:96.3937:19:19:680:0:0:0,-5.71957,-10 0|0:63.2824:8:8:295:0:0:0,-2.40824,-10 0|0:99:27:26:975:0:0:0,-7.82678,-10 0|1:99:15:9:339:6:214:-10,0,-10 0|0:69.303:10:10:372:0:0:0,-3.0103,-10 0|0:99:35:35:1280:0:0:0,-10,-10 0|0:63.2824:8:8:300:0:0:0,-2.40824,-10 0|0:84.3544:15:15:554:0:0:0,-4.51545,-10 0|0:96.3937:19:19:695:0:0:0,-5.71957,-10 0|0:81.3441:15:14:526:0:0:0,-4.21442,-10 0|0:69.303:10:10:364:0:0:0,-3.0103,-10 0|0:99:20:20:740:0:0:0,-6.0206,-10 0|0:57.2618:6:6:219:0:0:0,-1.80618,-10 0|0:69.303:10:10:356:0:0:0,-3.0103,-10 0|0:84.3544:15:15:563:0:0:0,-4.51545,-10 0|0:45.2206:2:2:75:0:0:0,-0.60206,-7.125 0|0:69.303:10:10:370:0:0:0,-3.0103,-10 0|0:99:26:26:969:0:0:0,-7.82678,-10 0|0:84.3544:18:15:535:0:0:0,-4.51545,-10 0|0:93.3844:18:18:671:0:0:0,-5.41854,-10 0|0:81.3441:14:14:524:0:0:0,-4.21442,-10 0|0:90.3746:17:17:634:0:0:0,-5.11751,-10 0|0:54.2515:5:5:190:0:0:0,-1.50515,-10 0|0:78.3339:13:13:478:0:0:0,-3.91339,-10 0|0:78.3339:13:13:455:0:0:0,-3.91339,-10 0|0:42.2103:1:1:37:0:0:0,-0.30103,-3.7 0|0:75.3236:13:12:436:0:0:0,-3.61236,-10 0|0:75.3236:12:12:434:0:0:0,-3.61236,-10 0|0:69.303:10:10:364:0:0:0,-3.0103,-10 scaffold_239 579418 . A T 2365.26 . AB=0.497143;ABP=3.02271;AC=6;AF=0.0326087;AN=184;AO=88;CIGAR=1X;DP=2592;DPB=2592;DPRA=0.965967;EPP=3.109;EPPR=3.95506;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.996;NS=92;NUMALT=1;ODDS=6.91589;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3190;QR=92360;RO=2503;RPP=194.1;RPPR=5438.21;RUN=1;SAF=43;SAP=3.109;SAR=45;SRF=1235;SRP=3.95506;SRR=1268;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:72.1861:17:17:638:0:0:0,-5.11751,-10 0/0:99:34:34:1266:0:0:0,-10,-10 0/0:81.2169:20:20:743:0:0:0,-6.0206,-10 0/0:69.1758:16:16:606:0:0:0,-4.81648,-10 0/0:93.2555:24:24:899:0:0:0,-7.22472,-10 0/1:99:47:23:815:24:873:-10,0,-10 0/0:99:41:41:1473:0:0:0,-10,-10 0/0:72.1861:17:17:636:0:0:0,-5.11751,-10 0/0:30.0419:3:3:103:0:0:0,-0.90309,-9.61333 0/0:54.1243:11:11:418:0:0:0,-3.31133,-10 0/0:63.1552:14:14:509:0:0:0,-4.21442,-10 0/0:99:51:51:1873:0:0:0,-10,-10 0/0:99:56:56:2055:0:0:0,-10,-10 0/0:99:57:57:2058:0:0:0,-10,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:99:39:39:1446:0:0:0,-10,-10 0/0:72.1861:17:17:642:0:0:0,-5.11751,-10 0/0:99:34:34:1238:0:0:0,-10,-10 0/0:99:38:38:1419:0:0:0,-10,-10 0/0:99:38:38:1392:0:0:0,-10,-10 0/0:99:40:40:1487:0:0:0,-10,-10 0/0:63.1552:14:14:510:0:0:0,-4.21442,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:99:28:28:1056:0:0:0,-8.42884,-10 0/0:99:27:27:1009:0:0:0,-8.12781,-10 0/0:99:27:27:1015:0:0:0,-8.12781,-10 0/0:72.1861:17:17:622:0:0:0,-5.11751,-10 0/0:99:31:31:1164:0:0:0,-9.33193,-10 0/0:99:47:47:1749:0:0:0,-10,-10 0/0:42.0831:7:7:265:0:0:0,-2.10721,-10 0/0:45.0934:8:8:304:0:0:0,-2.40824,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:60.1449:13:13:474:0:0:0,-3.91339,-10 0/0:99:34:34:1268:0:0:0,-10,-10 0/0:39.0728:6:6:204:0:0:0,-1.80618,-10 0/0:75.1964:18:18:680:0:0:0,-5.41854,-10 0/0:99:53:53:1940:0:0:0,-10,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:99:26:26:968:0:0:0,-7.82678,-10 0/0:99:44:44:1607:0:0:0,-10,-10 0/0:78.2067:19:19:718:0:0:0,-5.71957,-10 0/0:78.2067:19:19:714:0:0:0,-5.71957,-10 0/0:99:57:57:2116:0:0:0,-10,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:99:31:31:1156:0:0:0,-9.33193,-10 0/0:99:52:52:1927:0:0:0,-10,-10 0/0:99:36:36:1297:0:0:0,-10,-10 0/0:87.2369:22:22:807:0:0:0,-6.62266,-10 0/0:99:40:40:1502:0:0:0,-10,-10 0/0:87.2369:22:22:819:0:0:0,-6.62266,-10 0/0:99:40:40:1437:0:0:0,-10,-10 0/0:84.227:21:21:772:0:0:0,-6.32163,-10 0/0:48.1037:9:9:331:0:0:0,-2.70927,-10 0/0:99:45:45:1657:0:0:0,-10,-10 0/0:72.1861:17:17:646:0:0:0,-5.11751,-10 0/0:99:42:42:1538:0:0:0,-10,-10 0/0:43.4525:16:15:545:1:16:0,-2.01236,-10 0/0:87.2369:22:22:799:0:0:0,-6.62266,-10 0/0:66.1655:15:15:551:0:0:0,-4.51545,-10 0/0:99:42:42:1568:0:0:0,-10,-10 0/0:99:27:27:1004:0:0:0,-8.12781,-10 0/0:99:49:49:1828:0:0:0,-10,-10 0/0:96.2674:25:25:937:0:0:0,-7.52575,-10 0/0:66.1655:15:15:554:0:0:0,-4.51545,-10 0/0:99:45:45:1667:0:0:0,-10,-10 0/0:66.1655:15:15:560:0:0:0,-4.51545,-10 0/0:63.1552:14:14:505:0:0:0,-4.21442,-10 0/0:99:47:47:1746:0:0:0,-10,-10 0/0:51.114:10:10:379:0:0:0,-3.0103,-10 0/0:78.2067:19:19:700:0:0:0,-5.71957,-10 0/0:99:44:44:1611:0:0:0,-10,-10 0/0:99:33:33:1167:0:0:0,-9.93399,-10 0/0:81.2169:20:20:746:0:0:0,-6.0206,-10 0/0:99:37:37:1316:0:0:0,-10,-10 0/0:66.1655:15:15:549:0:0:0,-4.51545,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:75.1964:18:18:656:0:0:0,-5.41854,-10 0/1:0.000890288:7:0:0:7:260:-10,-2.10721,0 0/0:63.1552:14:14:532:0:0:0,-4.21442,-10 0/1:99:45:25:925:20:739:-10,0,-10 0/0:99:37:37:1329:0:0:0,-10,-10 0/1:99:33:16:596:17:622:-10,0,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:99:36:36:1318:0:0:0,-10,-10 0/0:48.1037:9:9:342:0:0:0,-2.70927,-10 0/0:99:31:31:1162:0:0:0,-9.33193,-10 0/0:75.1964:18:18:681:0:0:0,-5.41854,-10 0/1:99:9:5:167:4:145:-10,0,-10 0/0:99:31:30:1114:0:0:0,-9.0309,-10 0/1:99:34:19:664:15:535:-10,0,-10 0/0:96.2674:25:25:916:0:0:0,-7.52575,-10 scaffold_239 686124 . G T 8536.92 . AB=0.547468;ABP=9.19487;AC=40;AF=0.21978;AN=182;AO=309;CIGAR=1X;DP=1390;DPB=1390;DPRA=0.979815;EPP=3.86062;EPPR=14.9423;GTI=3;LEN=1;MEANALT=1.03333;MQM=60;MQMR=59.9824;NS=91;NUMALT=1;ODDS=0.828629;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11320;QR=39498;RO=1079;RPP=665.337;RPPR=2328.69;RUN=1;SAF=159;SAP=3.57952;SAR=150;SRF=576;SRP=13.7348;SRR=503;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:40.8449:17:0:0:17:636:-10,-5.11751,0 0/0:26.9281:6:6:228:0:0:0,-1.80618,-10 0/1:99:16:6:202:10:369:-10,0,-10 1/1:22.7831:11:0:0:11:406:-10,-3.31133,0 0/1:88.6689:10:7:242:3:114:-9.70888,0,-10 1/1:13.7522:8:0:0:8:295:-10,-2.40824,0 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:72.0826:21:21:782:0:0:0,-6.32163,-10 0/0:38.9693:10:10:375:0:0:0,-3.0103,-10 0/0:11.8765:1:1:38:0:0:0,-0.30103,-3.8 0/0:26.9281:6:6:226:0:0:0,-1.80618,-10 0/0:11.8765:1:1:38:0:0:0,-0.30103,-3.8 0/0:66.062:19:19:692:0:0:0,-5.71957,-10 0/0:99:36:36:1351:0:0:0,-10,-10 0/0:51.0105:14:14:519:0:0:0,-4.21442,-10 0/0:57.0311:16:16:602:0:0:0,-4.81648,-10 0/0:87.1338:26:26:944:0:0:0,-7.82678,-10 0/0:29.9384:7:7:266:0:0:0,-2.10721,-10 0/0:54.0208:15:15:570:0:0:0,-4.51545,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/1:99:19:7:244:12:450:-10,0,-10 0/0:78.1031:23:23:833:0:0:0,-6.92369,-10 0/0:32.9487:8:8:294:0:0:0,-2.40824,-10 0/0:51.0105:14:14:508:0:0:0,-4.21442,-10 0/0:54.0208:15:15:515:0:0:0,-4.51545,-10 0/1:99:12:6:209:6:228:-10,0,-10 0/0:78.1031:23:23:848:0:0:0,-6.92369,-10 0/0:48.0002:13:13:483:0:0:0,-3.91339,-10 0/0:93.1537:28:28:1002:0:0:0,-8.42884,-10 0/0:99:35:35:1283:0:0:0,-10,-10 .:.:.:.:.:.:.:. 0/0:17.8972:3:3:89:0:0:0,-0.90309,-8.30667 1/1:34.8243:15:0:0:15:544:-10,-4.51545,0 0/0:60.0414:17:17:640:0:0:0,-5.11751,-10 0/0:54.0208:15:15:530:0:0:0,-4.51545,-10 0/0:32.9487:8:8:282:0:0:0,-2.40824,-10 0/0:29.9384:7:7:244:0:0:0,-2.10721,-10 0/0:81.1134:24:24:902:0:0:0,-7.22472,-10 1/1:19.7728:10:0:0:10:349:-10,-3.0103,0 0/1:99:11:4:150:7:262:-10,0,-10 0/0:78.1031:23:23:869:0:0:0,-6.92369,-10 0/0:38.9693:10:10:367:0:0:0,-3.0103,-10 0/0:72.0826:22:21:776:0:0:0,-6.32163,-10 0/1:99:27:13:463:14:452:-10,0,-10 1/1:73.9582:28:0:0:28:1015:-10,-8.42884,0 0/0:29.9384:7:7:264:0:0:0,-2.10721,-10 0/0:99:37:37:1311:0:0:0,-10,-10 0/0:72.0826:21:21:756:0:0:0,-6.32163,-10 0/0:54.0208:15:15:504:0:0:0,-4.51545,-10 0/1:99:25:12:433:12:446:-10,0,-10 0/0:20.9075:4:4:152:0:0:0,-1.20412,-10 0/1:99:34:16:590:18:678:-10,0,-10 0/0:44.9899:12:12:445:0:0:0,-3.61236,-10 0/0:32.9487:8:8:304:0:0:0,-2.40824,-10 0/0:99:32:32:1161:0:0:0,-9.63296,-10 0/0:23.9178:5:5:189:0:0:0,-1.50515,-10 0/0:57.0311:16:16:593:0:0:0,-4.81648,-10 0/1:19.837:8:7:246:1:37:-2.19485,0,-10 0/0:81.1134:24:24:885:0:0:0,-7.22472,-10 1/1:13.7522:8:0:0:8:304:-10,-2.40824,0 0/0:66.062:19:19:700:0:0:0,-5.71957,-10 0/0:32.9487:8:8:303:0:0:0,-2.40824,-10 1/1:37.8346:16:0:0:16:540:-10,-4.81648,0 0/0:48.0002:13:13:483:0:0:0,-3.91339,-10 0/0:38.9693:10:10:380:0:0:0,-3.0103,-10 0/0:81.1134:24:24:905:0:0:0,-7.22472,-10 0/0:48.0002:13:13:465:0:0:0,-3.91339,-10 0/0:23.9178:5:5:190:0:0:0,-1.50515,-10 0/0:99:30:30:1117:0:0:0,-9.0309,-10 0/0:38.9693:10:10:364:0:0:0,-3.0103,-10 0/0:41.9796:11:11:412:0:0:0,-3.31133,-10 0/1:99:23:8:301:15:546:-10,0,-10 1/1:40.8449:17:0:0:17:643:-10,-5.11751,0 0/0:38.9693:10:10:380:0:0:0,-3.0103,-10 0/1:99:27:13:458:14:523:-10,0,-10 0/0:38.9693:10:10:375:0:0:0,-3.0103,-10 0/0:32.9487:8:8:282:0:0:0,-2.40824,-10 0/1:0.285744:3:0:0:3:114:-10,-0.90309,0 0/1:0.140522:2:0:0:2:76:-7.22,-0.60206,0 0/0:32.9487:8:8:267:0:0:0,-2.40824,-10 0/1:99:25:12:449:13:488:-10,0,-10 0/1:99:22:8:280:14:531:-10,0,-10 0/1:99:18:8:300:10:356:-10,0,-10 0/1:99:12:6:203:6:206:-10,0,-10 0/0:78.1031:23:23:842:0:0:0,-6.92369,-10 1/1:7.73157:6:0:0:6:218:-10,-1.80618,0 0/0:32.9487:8:8:278:0:0:0,-2.40824,-10 0/0:29.9384:7:7:266:0:0:0,-2.10721,-10 0/1:0.285744:3:0:0:3:114:-10,-0.90309,0 0/1:99:11:4:152:7:266:-10,0,-10 0/1:90.8133:8:5:184:3:114:-9.97995,0,-10 0/0:41.9796:11:11:415:0:0:0,-3.31133,-10 scaffold_239 712304 . T C 446.402 . AB=0.512821;ABP=3.06598;AC=1;AF=0.00543478;AN=184;AO=21;CIGAR=1X;DP=1983;DPB=1983;DPRA=1.28371;EPP=3.1137;EPPR=19.517;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9459;NS=92;NUMALT=1;ODDS=2.91344;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=699;QR=71950;RO=1958;RPP=48.6112;RPPR=3741.42;RUN=1;SAF=11;SAP=3.1137;SAR=10;SRF=1067;SRP=37.3635;SRR=891;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:66.5243:18:18:676:0:0:0,-5.41854,-10 0/0:45.4523:11:11:405:0:0:0,-3.31133,-10 0/0:66.5243:18:18:674:0:0:0,-5.41854,-10 0/0:24.3802:4:4:152:0:0:0,-1.20412,-10 0/0:0.226245:16:15:565:1:38:-0.18764,0,-10 0/0:33.4111:7:7:266:0:0:0,-2.10721,-10 0/0:99:49:48:1745:0:0:0,-10,-10 0/0:99:34:34:1200:0:0:0,-10,-10 0/0:51.4729:13:13:484:0:0:0,-3.91339,-10 0/0:30.4008:6:6:224:0:0:0,-1.80618,-10 0/0:27.3905:5:5:189:0:0:0,-1.50515,-10 0/0:30.4008:6:6:228:0:0:0,-1.80618,-10 0/0:84.5861:24:24:886:0:0:0,-7.22472,-10 0/0:99:41:41:1526:0:0:0,-10,-10 0/0:99:38:37:1356:0:0:0,-10,-10 0/0:54.4832:15:14:466:0:0:0,-4.21442,-10 0/0:84.5861:24:24:844:0:0:0,-7.22472,-10 0/0:54.4832:14:14:501:0:0:0,-4.21442,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:99:38:38:1384:0:0:0,-10,-10 0/0:96.6257:28:28:1024:0:0:0,-8.42884,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:48.4626:12:12:449:0:0:0,-3.61236,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:63.5141:17:17:630:0:0:0,-5.11751,-10 0/0:90.6063:26:26:943:0:0:0,-7.82678,-10 0/0:66.5243:18:18:680:0:0:0,-5.41854,-10 0/0:63.5141:17:17:614:0:0:0,-5.11751,-10 0/0:84.5861:24:24:900:0:0:0,-7.22472,-10 0/0:99:36:36:1334:0:0:0,-10,-10 0/0:30.4008:6:6:228:0:0:0,-1.80618,-10 0/0:57.4935:15:15:555:0:0:0,-4.51545,-10 0/0:90.6063:26:26:965:0:0:0,-7.82678,-10 0/0:54.4832:14:14:510:0:0:0,-4.21442,-10 0/0:54.4832:14:14:530:0:0:0,-4.21442,-10 0/0:45.4523:11:11:390:0:0:0,-3.31133,-10 0/0:33.4111:7:7:263:0:0:0,-2.10721,-10 0/0:99:42:42:1541:0:0:0,-10,-10 0/0:72.5449:20:20:754:0:0:0,-6.0206,-10 0/0:36.4214:8:8:292:0:0:0,-2.40824,-10 0/0:99:34:34:1266:0:0:0,-10,-10 0/0:84.5861:24:24:877:0:0:0,-7.22472,-10 0/0:75.5552:21:21:762:0:0:0,-6.32163,-10 0/0:99:36:36:1336:0:0:0,-10,-10 0/0:93.6162:27:27:1013:0:0:0,-8.12781,-10 0/0:66.5243:18:18:672:0:0:0,-5.41854,-10 0/0:99:64:64:2365:0:0:0,-10,-10 0/0:87.5962:25:25:912:0:0:0,-7.52575,-10 0/0:42.442:10:10:368:0:0:0,-3.0103,-10 0/0:99:47:47:1754:0:0:0,-10,-10 0/0:63.5141:17:17:615:0:0:0,-5.11751,-10 0/0:99:37:37:1351:0:0:0,-10,-10 0/0:57.4935:15:15:533:0:0:0,-4.51545,-10 0/0:30.4008:6:6:203:0:0:0,-1.80618,-10 0/0:99:58:58:2132:0:0:0,-10,-10 0/0:54.4832:14:14:522:0:0:0,-4.21442,-10 0/0:57.4935:15:15:559:0:0:0,-4.51545,-10 0/0:27.3905:5:5:141:0:0:0,-1.50515,-10 0/0:93.6162:27:27:974:0:0:0,-8.12781,-10 0/0:33.4111:7:7:266:0:0:0,-2.10721,-10 0/0:84.5861:24:24:893:0:0:0,-7.22472,-10 0/0:54.4832:14:14:517:0:0:0,-4.21442,-10 0/1:99:39:19:708:20:661:-10,0,-10 0/0:72.5449:20:20:705:0:0:0,-6.0206,-10 0/0:57.4935:15:15:569:0:0:0,-4.51545,-10 0/0:93.6162:27:27:976:0:0:0,-8.12781,-10 0/0:75.5552:21:21:798:0:0:0,-6.32163,-10 0/0:57.4935:15:15:523:0:0:0,-4.51545,-10 0/0:99:43:43:1601:0:0:0,-10,-10 0/0:54.4832:14:14:528:0:0:0,-4.21442,-10 0/0:60.5038:16:16:597:0:0:0,-4.81648,-10 0/0:93.6162:27:27:971:0:0:0,-8.12781,-10 0/0:99:32:32:1151:0:0:0,-9.63296,-10 0/0:54.4832:14:14:488:0:0:0,-4.21442,-10 0/0:57.4935:15:15:552:0:0:0,-4.51545,-10 0/0:51.4729:13:13:488:0:0:0,-3.91339,-10 0/0:51.4729:13:13:470:0:0:0,-3.91339,-10 0/0:42.442:10:10:369:0:0:0,-3.0103,-10 0/0:42.442:10:10:377:0:0:0,-3.0103,-10 0/0:54.4832:14:14:528:0:0:0,-4.21442,-10 0/0:99:37:37:1380:0:0:0,-10,-10 0/0:99:32:32:1133:0:0:0,-9.63296,-10 0/0:99:34:34:1245:0:0:0,-10,-10 0/0:84.5861:25:24:894:0:0:0,-7.22472,-10 0/0:93.6162:27:27:1025:0:0:0,-8.12781,-10 0/0:33.4111:7:7:254:0:0:0,-2.10721,-10 0/0:66.5243:18:18:671:0:0:0,-5.41854,-10 0/0:69.5346:19:19:707:0:0:0,-5.71957,-10 0/0:30.4008:6:6:223:0:0:0,-1.80618,-10 0/0:63.5141:17:17:635:0:0:0,-5.11751,-10 0/0:87.5962:25:25:922:0:0:0,-7.52575,-10 0/0:60.5038:16:16:575:0:0:0,-4.81648,-10 scaffold_239 712347 . T C 1213.82 . AB=0.5625;ABP=4.09604;AC=3;AF=0.0163043;AN=184;AO=47;CIGAR=1X;DP=1588;DPB=1588;DPRA=1.95123;EPP=3.42611;EPPR=22.2999;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9312;NS=92;NUMALT=1;ODDS=0.395837;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1774;QR=56535;RO=1541;RPP=96.5684;RPPR=3068.75;RUN=1;SAF=23;SAP=3.0565;SAR=24;SRF=745;SRP=6.67545;SRR=796;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.3508:19:19:674:0:0:0,-5.71957,-10 0/0:30.2581:10:10:380:0:0:0,-3.0103,-10 0/0:51.3302:17:17:628:0:0:0,-5.11751,-10 0/0:30.2581:10:10:374:0:0:0,-3.0103,-10 0/0:24.2375:8:8:303:0:0:0,-2.40824,-10 0/0:24.2375:8:8:282:0:0:0,-2.40824,-10 0/0:99:38:38:1372:0:0:0,-10,-10 0/0:93.4735:31:31:1165:0:0:0,-9.33193,-10 0/0:21.2272:7:7:257:0:0:0,-2.10721,-10 0/0:18.2169:6:6:218:0:0:0,-1.80618,-10 0/0:24.2375:8:8:304:0:0:0,-2.40824,-10 0/0:6.17567:2:2:76:0:0:0,-0.60206,-7.22 0/0:78.4228:26:26:972:0:0:0,-7.82678,-10 0/0:96.4829:32:32:1190:0:0:0,-9.63296,-10 0/0:63.3714:21:21:797:0:0:0,-6.32163,-10 0/0:48.3199:16:16:607:0:0:0,-4.81648,-10 0/0:72.4023:24:24:877:0:0:0,-7.22472,-10 0/0:30.2581:10:10:368:0:0:0,-3.0103,-10 0/0:45.3096:15:15:555:0:0:0,-4.51545,-10 0/0:75.4126:25:25:843:0:0:0,-7.52575,-10 0/0:42.2993:14:14:532:0:0:0,-4.21442,-10 0/0:57.3508:19:19:697:0:0:0,-5.71957,-10 0/0:15.2066:5:5:188:0:0:0,-1.50515,-10 0/0:30.2581:10:10:378:0:0:0,-3.0103,-10 0/0:66.3817:22:22:780:0:0:0,-6.62266,-10 0/0:51.3302:17:17:630:0:0:0,-5.11751,-10 0/0:45.3096:15:15:520:0:0:0,-4.51545,-10 0/0:33.2684:11:11:383:0:0:0,-3.31133,-10 0/0:66.3817:22:22:803:0:0:0,-6.62266,-10 0/0:90.4636:30:30:1123:0:0:0,-9.0309,-10 0/0:15.2066:5:5:190:0:0:0,-1.50515,-10 0/0:33.2684:11:11:395:0:0:0,-3.31133,-10 0/0:57.3508:19:19:703:0:0:0,-5.71957,-10 0/0:27.2478:9:9:341:0:0:0,-2.70927,-10 0/0:27.2478:9:9:333:0:0:0,-2.70927,-10 0/0:12.1963:4:4:147:0:0:0,-1.20412,-10 0/0:39.289:13:13:482:0:0:0,-3.91339,-10 0/0:90.4636:30:30:1121:0:0:0,-9.0309,-10 0/0:33.2684:11:11:404:0:0:0,-3.31133,-10 0/0:36.2787:12:12:427:0:0:0,-3.61236,-10 0/0:75.4126:25:25:897:0:0:0,-7.52575,-10 0/0:78.4228:26:26:970:0:0:0,-7.82678,-10 0/0:54.3405:18:18:667:0:0:0,-5.41854,-10 0/0:99:37:37:1373:0:0:0,-10,-10 0/0:48.3199:16:16:576:0:0:0,-4.81648,-10 0/0:27.2478:9:9:329:0:0:0,-2.70927,-10 0/0:99:33:33:1246:0:0:0,-9.93399,-10 0/0:57.3508:19:19:667:0:0:0,-5.71957,-10 0/0:42.2993:14:14:524:0:0:0,-4.21442,-10 0/0:99:36:36:1339:0:0:0,-10,-10 0/0:15.2066:5:5:187:0:0:0,-1.50515,-10 0/0:99:44:44:1623:0:0:0,-10,-10 0/0:45.3096:15:15:523:0:0:0,-4.51545,-10 0/0:21.2272:7:7:266:0:0:0,-2.10721,-10 0/0:25.6248:39:37:1301:2:76:0,-1.65035,-10 0/0:27.2478:9:9:314:0:0:0,-2.70927,-10 0/0:54.3405:18:18:651:0:0:0,-5.41854,-10 0/0:30.2581:10:10:366:0:0:0,-3.0103,-10 0/0:36.2787:12:12:446:0:0:0,-3.61236,-10 0/0:36.2787:12:12:452:0:0:0,-3.61236,-10 0/0:90.4636:30:30:1109:0:0:0,-9.0309,-10 0/0:48.3199:16:16:605:0:0:0,-4.81648,-10 0/0:72.4023:24:24:879:0:0:0,-7.22472,-10 0/0:54.3405:18:18:667:0:0:0,-5.41854,-10 0/0:24.2375:8:8:294:0:0:0,-2.40824,-10 0/0:81.4331:27:27:997:0:0:0,-8.12781,-10 0/0:48.3199:16:16:593:0:0:0,-4.81648,-10 0/0:36.2787:12:12:450:0:0:0,-3.61236,-10 0/0:90.4636:30:30:1128:0:0:0,-9.0309,-10 0/0:30.2581:10:10:368:0:0:0,-3.0103,-10 0/0:54.3405:18:18:676:0:0:0,-5.41854,-10 0/0:87.4535:29:29:1063:0:0:0,-8.72987,-10 0/0:54.3405:18:18:657:0:0:0,-5.41854,-10 1/1:55.0237:27:0:0:27:1021:-10,-8.12781,0 0/1:99:32:14:527:18:677:-10,0,-10 0/0:36.2787:12:12:386:0:0:0,-3.61236,-10 0/0:51.3302:17:17:625:0:0:0,-5.11751,-10 0/0:30.2581:10:10:313:0:0:0,-3.0103,-10 0/0:12.1963:4:4:107:0:0:0,-1.20412,-9.8975 0/0:39.289:13:13:493:0:0:0,-3.91339,-10 0/0:87.4535:29:29:1061:0:0:0,-8.72987,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/0:54.3405:18:18:663:0:0:0,-5.41854,-10 0/0:42.2993:14:14:531:0:0:0,-4.21442,-10 0/0:69.392:23:23:851:0:0:0,-6.92369,-10 0/0:30.2581:10:10:374:0:0:0,-3.0103,-10 0/0:36.2787:12:12:443:0:0:0,-3.61236,-10 0/0:45.3096:15:15:559:0:0:0,-4.51545,-10 0/0:9.18597:3:3:114:0:0:0,-0.90309,-10 0/0:27.2478:9:9:341:0:0:0,-2.70927,-10 0/0:42.2993:14:14:502:0:0:0,-4.21442,-10 0/0:36.2787:12:12:423:0:0:0,-3.61236,-10 scaffold_239 819795 . GT G 240.347 . AB=0.526316;ABP=3.12459;AC=1;AF=0.00537634;AN=186;AO=10;CIGAR=1M1D1M;DP=2102;DPB=2098.67;DPRA=0.839174;EPP=6.48466;EPPR=6.75422;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9986;NS=93;NUMALT=1;ODDS=10.9977;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=373;QR=76732;RO=2088;RPP=24.725;RPPR=4537.04;RUN=1;SAF=7;SAP=6.48466;SAR=3;SRF=1014;SRP=6.75422;SRR=1074;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:99:24:24:876:0:0:0,-7.22472,-10 0|0:89.9066:15:15:520:0:0:0,-4.51545,-10 0|0:99:35:35:1303:0:0:0,-10,-10 0|0:83.8858:13:13:462:0:0:0,-3.91339,-10 0|0:98.9369:19:18:660:0:0:0,-5.41854,-10 0|0:99:20:20:720:0:0:0,-6.0206,-10 0|0:99:41:41:1521:0:0:0,-10,-10 0|0:99:27:27:1020:0:0:0,-8.12781,-10 0|0:71.8449:9:9:335:0:0:0,-2.70927,-10 0|0:53.7831:3:3:114:0:0:0,-0.90309,-10 0|0:77.8655:11:11:402:0:0:0,-3.31133,-10 0|0:68.8346:8:8:293:0:0:0,-2.40824,-10 0|0:99:41:41:1504:0:0:0,-10,-10 0|0:99:35:35:1306:0:0:0,-10,-10 0|0:99:34:34:1227:0:0:0,-10,-10 0|0:99:23:23:845:0:0:0,-6.92369,-10 0|0:99:35:35:1287:0:0:0,-10,-10 0|0:74.8552:10:10:352:0:0:0,-3.0103,-10 0|0:99:35:35:1282:0:0:0,-10,-10 0|0:99:39:39:1393:0:0:0,-10,-10 0|0:99:20:20:742:0:0:0,-6.0206,-10 0|0:99:37:37:1369:0:0:0,-10,-10 0|0:77.8655:11:11:387:0:0:0,-3.31133,-10 0|0:99:28:28:1037:0:0:0,-8.42884,-10 0|0:99:21:21:761:0:0:0,-6.32163,-10 0|0:99:32:32:1168:0:0:0,-9.63296,-10 0|0:99:38:38:1396:0:0:0,-10,-10 0|0:80.8757:12:12:446:0:0:0,-3.61236,-10 0|0:89.9066:15:15:550:0:0:0,-4.51545,-10 0|0:99:48:48:1774:0:0:0,-10,-10 0|0:62.814:6:6:226:0:0:0,-1.80618,-10 0|0:56.7934:4:4:152:0:0:0,-1.20412,-10 0|0:99:21:21:755:0:0:0,-6.32163,-10 0|0:83.8858:13:13:471:0:0:0,-3.91339,-10 0|0:95.9231:17:17:611:0:0:0,-5.11751,-10 0|0:71.8449:9:9:330:0:0:0,-2.70927,-10 0|0:86.8959:14:14:514:0:0:0,-4.21442,-10 0|0:99:25:25:937:0:0:0,-7.52575,-10 0|0:99:20:20:733:0:0:0,-6.0206,-10 0|0:99:19:19:705:0:0:0,-5.71957,-10 0|0:99:35:35:1288:0:0:0,-10,-10 0|0:98.9369:19:18:674:0:0:0,-5.41854,-10 0|0:92.9168:16:16:559:0:0:0,-4.81648,-10 0|0:99:32:32:1185:0:0:0,-9.63296,-10 0|0:99:28:28:1049:0:0:0,-8.42884,-10 0|0:68.8346:8:8:297:0:0:0,-2.40824,-10 0|0:99:51:51:1829:0:0:0,-10,-10 0|0:99:39:39:1462:0:0:0,-10,-10 0|0:86.8959:14:14:520:0:0:0,-4.21442,-10 0|0:99:31:31:1120:0:0:0,-9.33193,-10 0|0:77.8655:11:11:410:0:0:0,-3.31133,-10 0|0:99:38:38:1395:0:0:0,-10,-10 0|0:99:21:21:768:0:0:0,-6.32163,-10 0|0:74.8552:10:10:364:0:0:0,-3.0103,-10 0|0:99:48:47:1710:0:0:0,-10,-10 0|0:99:22:22:810:0:0:0,-6.62266,-10 0|0:99:23:23:846:0:0:0,-6.92369,-10 0|0:65.8243:7:7:254:0:0:0,-2.10721,-10 0|0:99:20:20:756:0:0:0,-6.0206,-10 0|0:99:21:21:788:0:0:0,-6.32163,-10 0|0:99:39:39:1470:0:0:0,-10,-10 0|0:80.8757:12:12:443:0:0:0,-3.61236,-10 0|0:99:43:43:1580:0:0:0,-10,-10 0|0:99:26:26:967:0:0:0,-7.82678,-10 0|0:99:19:19:698:0:0:0,-5.71957,-10 0|0:99:37:37:1361:0:0:0,-10,-10 0|0:99:25:25:926:0:0:0,-7.52575,-10 0|0:77.8655:11:11:408:0:0:0,-3.31133,-10 0|0:99:29:29:1031:0:0:0,-8.72987,-10 0|0:86.8959:14:14:529:0:0:0,-4.21442,-10 0|0:99:25:25:917:0:0:0,-7.52575,-10 0|0:99:42:42:1567:0:0:0,-10,-10 0|0:99:24:24:881:0:0:0,-7.22472,-10 0|0:99:20:20:711:0:0:0,-6.0206,-10 0|0:99:27:27:1000:0:0:0,-8.12781,-10 0|0:71.8449:9:9:333:0:0:0,-2.70927,-10 0|0:83.8858:13:13:478:0:0:0,-3.91339,-10 0|0:99:24:24:876:0:0:0,-7.22472,-10 0|0:59.8037:5:5:171:0:0:0,-1.50515,-10 0|0:86.8959:14:14:512:0:0:0,-4.21442,-10 0|0:99:38:38:1418:0:0:0,-10,-10 0|0:99:36:36:1319:0:0:0,-10,-10 0|0:99:22:22:819:0:0:0,-6.62266,-10 0|1:99:19:9:312:10:373:-10,0,-10 0|0:99:21:21:792:0:0:0,-6.32163,-10 0|0:71.8449:9:9:339:0:0:0,-2.70927,-10 0|0:89.9066:16:15:557:0:0:0,-4.51545,-10 0|0:99:26:26:951:0:0:0,-7.82678,-10 0|0:80.8757:12:12:454:0:0:0,-3.61236,-10 0|0:99:21:21:767:0:0:0,-6.32163,-10 0|0:99:22:22:788:0:0:0,-6.62266,-10 0|0:99:20:20:749:0:0:0,-6.0206,-10 scaffold_239 819806 . T C 11495 . AB=0.507576;ABP=3.27351;AC=35;AF=0.188172;AN=186;AO=412;CIGAR=1X;DP=2104;DPB=2104;DPRA=1.1377;EPP=3.34762;EPPR=5.06857;GTI=2;LEN=1;MEANALT=1.03571;MQM=59.9927;MQMR=60;NS=93;NUMALT=1;ODDS=0.380096;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15020;QR=62123;RO=1688;RPP=897.657;RPPR=3668.46;RUN=1;SAF=202;SAP=3.34762;SAR=210;SRF=824;SRP=5.06857;SRR=864;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:80.27:24:24:884:0:0:0,-7.22472,-10 0/0:53.1773:15:15:510:0:0:0,-4.51545,-10 0/1:99:35:25:941:10:380:-10,0,-10 1/1:28.9673:13:0:0:13:479:-10,-3.91339,0 0/0:65.2185:19:19:700:0:0:0,-5.71957,-10 0/0:68.2288:20:20:711:0:0:0,-6.0206,-10 0/0:99:41:41:1505:0:0:0,-10,-10 0/0:89.3005:27:27:1013:0:0:0,-8.12781,-10 0/0:35.1155:9:9:339:0:0:0,-2.70927,-10 0/1:0.374195:3:0:0:3:114:-10,-0.90309,0 1/1:22.9467:11:0:0:11:403:-10,-3.31133,0 0/0:32.1052:8:8:298:0:0:0,-2.40824,-10 0/0:99:41:41:1491:0:0:0,-10,-10 1/1:95.1923:35:0:0:35:1320:-10,-10,0 0/1:99:34:16:597:18:623:-10,0,-10 0/1:99:23:13:490:10:376:-10,0,-10 0/1:99:35:15:551:20:717:-10,0,-10 0/0:38.1258:10:10:348:0:0:0,-3.0103,-10 0/0:99:35:34:1227:0:0:0,-10,-10 0/1:99:39:18:677:21:737:-10,0,-10 0/0:68.2288:20:20:749:0:0:0,-6.0206,-10 0/0:99:37:36:1312:0:0:0,-10,-10 0/0:41.1361:11:11:391:0:0:0,-3.31133,-10 0/0:92.3104:28:28:1029:0:0:0,-8.42884,-10 0/0:29.9158:21:20:737:1:31:0,-1.89941,-10 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:99:38:38:1373:0:0:0,-10,-10 0/0:44.1464:12:12:455:0:0:0,-3.61236,-10 0/0:53.1773:15:15:548:0:0:0,-4.51545,-10 0/0:99:48:48:1781:0:0:0,-10,-10 0/0:26.0846:6:6:202:0:0:0,-1.80618,-10 0/0:20.064:4:4:149:0:0:0,-1.20412,-10 0/0:71.2391:21:21:783:0:0:0,-6.32163,-10 0/0:47.1567:13:13:466:0:0:0,-3.91339,-10 1/1:41.0085:17:0:0:17:602:-10,-5.11751,0 0/0:35.1155:9:9:316:0:0:0,-2.70927,-10 1/1:31.9776:14:0:0:14:516:-10,-4.21442,0 0/1:99:25:10:373:15:567:-10,0,-10 0/0:68.2288:20:20:750:0:0:0,-6.0206,-10 0/1:99:19:9:338:10:356:-10,0,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:62.2082:19:18:676:0:0:0,-5.41854,-10 0/0:56.1876:16:16:561:0:0:0,-4.81648,-10 0/1:99:32:23:860:9:291:-10,0,-10 0/1:99:28:12:454:16:599:-10,0,-10 0/1:99:8:3:113:5:188:-10,0,-9.88661 0/1:99:51:28:1017:23:815:-10,0,-10 0/0:99:40:40:1459:0:0:0,-10,-10 0/0:50.167:14:14:501:0:0:0,-4.21442,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:41.1361:11:11:418:0:0:0,-3.31133,-10 0/0:99:38:38:1406:0:0:0,-10,-10 0/0:71.2391:21:21:783:0:0:0,-6.32163,-10 0/0:38.1258:10:10:357:0:0:0,-3.0103,-10 0/1:99:48:25:899:23:810:-10,0,-10 0/0:74.2494:22:22:836:0:0:0,-6.62266,-10 0/0:77.2597:23:23:847:0:0:0,-6.92369,-10 0/0:29.0949:7:7:264:0:0:0,-2.10721,-10 0/0:68.2288:20:20:757:0:0:0,-6.0206,-10 1/1:53.0497:21:0:0:21:786:-10,-6.32163,0 0/0:99:39:39:1453:0:0:0,-10,-10 0/0:44.1464:12:12:455:0:0:0,-3.61236,-10 0/0:99:43:43:1579:0:0:0,-10,-10 0/0:86.2904:26:26:944:0:0:0,-7.82678,-10 0/0:65.2185:19:19:672:0:0:0,-5.71957,-10 0/0:99:37:37:1339:0:0:0,-10,-10 0/1:99:25:11:409:13:470:-10,0,-10 0/0:41.1361:11:11:413:0:0:0,-3.31133,-10 0/0:95.3199:29:29:995:0:0:0,-8.72987,-10 0/0:50.167:14:14:511:0:0:0,-4.21442,-10 0/0:83.2802:25:25:939:0:0:0,-7.52575,-10 0/0:99:42:42:1549:0:0:0,-10,-10 0/0:80.27:24:24:890:0:0:0,-7.22472,-10 0/0:68.2288:20:20:707:0:0:0,-6.0206,-10 0/0:89.3005:27:27:1015:0:0:0,-8.12781,-10 0/0:35.1155:9:9:340:0:0:0,-2.70927,-10 1/1:28.9673:13:0:0:13:489:-10,-3.91339,0 0/0:80.27:24:24:903:0:0:0,-7.22472,-10 0/1:1.74065:5:0:0:5:189:-10,-1.50515,0 0/0:50.167:14:14:508:0:0:0,-4.21442,-10 0/1:99:38:17:645:21:788:-10,0,-10 0/1:99:36:16:608:20:731:-10,0,-10 0/1:99:22:11:414:11:395:-10,0,-10 1/1:47.0291:19:0:0:19:693:-10,-5.71957,0 0/0:71.2391:21:21:792:0:0:0,-6.32163,-10 0/0:35.1155:9:9:342:0:0:0,-2.70927,-10 0/0:56.1876:16:16:592:0:0:0,-4.81648,-10 0/0:86.2904:26:26:974:0:0:0,-7.82678,-10 0/0:44.1464:12:12:455:0:0:0,-3.61236,-10 0/1:99:22:7:221:15:555:-10,0,-10 0/0:74.2494:22:22:802:0:0:0,-6.62266,-10 0/0:68.2288:20:20:758:0:0:0,-6.0206,-10 scaffold_239 819808 . C T 1580.38 . AB=0.746988;ABP=46.9892;AC=5;AF=0.0268817;AN=186;AO=63;CIGAR=1X;DP=2104;DPB=2104;DPRA=0.738761;EPP=12.9715;EPPR=4.17005;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9985;NS=93;NUMALT=1;ODDS=3.47783;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2288;QR=74541;RO=2039;RPP=139.813;RPPR=4430.64;RUN=1;SAF=23;SAP=12.9715;SAR=40;SRF=1003;SRP=4.17005;SRR=1036;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:91.2167:24:24:859:0:0:0,-7.22472,-10 0/0:64.1249:15:15:537:0:0:0,-4.51545,-10 0/0:99:35:35:1300:0:0:0,-10,-10 0/0:58.1043:13:13:480:0:0:0,-3.91339,-10 0/0:47.3379:19:18:658:1:16:0,-2.84082,-10 0/0:79.1763:20:20:697:0:0:0,-6.0206,-10 0/0:99:41:40:1445:0:0:0,-10,-10 0/1:99:27:10:369:17:641:-10,0,-10 0/1:0.00401601:9:0:0:9:342:-10,-2.70927,0 0/0:28.0013:3:3:111:0:0:0,-0.90309,-10 0/0:52.0837:11:11:396:0:0:0,-3.31133,-10 0/0:43.0528:8:8:293:0:0:0,-2.40824,-10 0/0:99:41:41:1480:0:0:0,-10,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:99:34:34:1195:0:0:0,-10,-10 0/1:99:23:11:410:12:449:-10,0,-10 0/0:99:35:35:1239:0:0:0,-10,-10 0/1:0.00803574:10:0:0:10:355:-10,-3.0103,0 0/0:99:35:35:1258:0:0:0,-10,-10 0/0:99:39:39:1384:0:0:0,-10,-10 0/0:79.1763:20:20:733:0:0:0,-6.0206,-10 0/0:99:37:37:1337:0:0:0,-10,-10 0/0:52.0837:11:11:396:0:0:0,-3.31133,-10 0/0:99:28:28:1010:0:0:0,-8.42884,-10 0/0:82.1866:21:21:781:0:0:0,-6.32163,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:99:38:38:1403:0:0:0,-10,-10 0/0:55.094:12:12:447:0:0:0,-3.61236,-10 0/0:64.1249:15:15:560:0:0:0,-4.51545,-10 0/0:99:48:48:1770:0:0:0,-10,-10 0/0:37.0322:6:6:226:0:0:0,-1.80618,-10 0/0:31.0116:4:4:152:0:0:0,-1.20412,-10 0/0:82.1866:21:21:784:0:0:0,-6.32163,-10 0/0:58.1043:13:13:459:0:0:0,-3.91339,-10 0/0:70.1455:17:17:631:0:0:0,-5.11751,-10 0/0:46.0631:9:9:320:0:0:0,-2.70927,-10 0/0:61.1146:14:14:523:0:0:0,-4.21442,-10 0/0:94.2261:25:25:924:0:0:0,-7.52575,-10 0/0:79.1763:20:20:731:0:0:0,-6.0206,-10 0/0:76.1661:19:19:722:0:0:0,-5.71957,-10 0/0:99:35:35:1254:0:0:0,-10,-10 0/0:76.1661:19:19:695:0:0:0,-5.71957,-10 0/0:67.1352:16:16:558:0:0:0,-4.81648,-10 0/0:99:32:32:1164:0:0:0,-9.63296,-10 0/0:99:28:28:1062:0:0:0,-8.42884,-10 0/0:43.0528:8:8:282:0:0:0,-2.40824,-10 0/0:99:51:51:1874:0:0:0,-10,-10 0/0:99:40:40:1457:0:0:0,-10,-10 0/0:61.1146:14:14:505:0:0:0,-4.21442,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:52.0837:11:11:418:0:0:0,-3.31133,-10 0/0:99:38:38:1383:0:0:0,-10,-10 0/0:82.1866:21:21:787:0:0:0,-6.32163,-10 0/0:49.0734:10:10:372:0:0:0,-3.0103,-10 0/0:99:48:48:1741:0:0:0,-10,-10 0/0:85.1968:22:22:832:0:0:0,-6.62266,-10 0/0:88.2068:23:23:824:0:0:0,-6.92369,-10 0/0:40.0425:7:7:255:0:0:0,-2.10721,-10 0/0:79.1763:20:20:738:0:0:0,-6.0206,-10 0/0:82.1866:21:21:790:0:0:0,-6.32163,-10 0/0:99:39:39:1471:0:0:0,-10,-10 0/0:55.094:12:12:454:0:0:0,-3.61236,-10 0/0:99:43:43:1600:0:0:0,-10,-10 0/0:97.2345:26:26:948:0:0:0,-7.82678,-10 0/0:76.1661:19:19:687:0:0:0,-5.71957,-10 0/0:99:37:36:1301:0:0:0,-10,-10 0/0:94.2261:25:25:907:0:0:0,-7.52575,-10 0/0:52.0837:11:11:378:0:0:0,-3.31133,-10 0/0:99:29:29:1023:0:0:0,-8.72987,-10 0/0:61.1146:14:14:499:0:0:0,-4.21442,-10 0/0:94.2261:25:25:884:0:0:0,-7.52575,-10 0/0:99:42:42:1528:0:0:0,-10,-10 0/0:91.2167:24:24:879:0:0:0,-7.22472,-10 0/0:79.1763:20:20:705:0:0:0,-6.0206,-10 0/0:99:27:27:1022:0:0:0,-8.12781,-10 0/0:46.0631:9:9:329:0:0:0,-2.70927,-10 0/0:58.1043:13:13:476:0:0:0,-3.91339,-10 0/0:91.2167:24:24:871:0:0:0,-7.22472,-10 0/0:34.0219:5:5:186:0:0:0,-1.50515,-10 0/1:0.130391:14:0:0:14:485:-10,-4.21442,0 0/0:99:38:38:1419:0:0:0,-10,-10 0/0:99:36:36:1346:0:0:0,-10,-10 0/0:85.1968:22:22:793:0:0:0,-6.62266,-10 0/0:76.1661:19:19:721:0:0:0,-5.71957,-10 0/0:82.1866:21:21:786:0:0:0,-6.32163,-10 0/0:46.0631:9:9:336:0:0:0,-2.70927,-10 0/0:67.1352:16:16:573:0:0:0,-4.81648,-10 0/0:97.2345:26:26:979:0:0:0,-7.82678,-10 0/0:55.094:12:12:456:0:0:0,-3.61236,-10 0/0:85.1968:22:22:775:0:0:0,-6.62266,-10 0/0:85.1968:22:22:794:0:0:0,-6.62266,-10 0/0:79.1763:20:20:746:0:0:0,-6.0206,-10 scaffold_239 861041 . TG T 347.36 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=15;CIGAR=1M1D5M;DP=1920;DPB=1918.43;DPRA=1.1292;EPP=3.15506;EPPR=3.12556;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.982;NS=92;NUMALT=1;ODDS=7.91366;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=17.5;PQR=17.5;PRO=0.5;QA=547;QR=67804;RO=1884;RPP=35.5824;RPPR=4094.06;RUN=1;SAF=7;SAP=3.15506;SAR=8;SRF=947;SRP=3.12556;SRR=937;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:67.4873:14:13:453:0:0:0,-3.91339,-10 0|0:52.4358:8:8:293:0:0:0,-2.40824,-10 0|0:41.946:19:18:643:1:33:0,-1.14082,-10 0|0:73.5079:15:15:546:0:0:0,-4.51545,-10 0|0:52.4358:8:8:276:0:0:0,-2.40824,-10 0|0:34.374:2:2:75:0:0:0,-0.60206,-7.125 0|0:99:40:40:1459:0:0:0,-10,-10 0|0:82.5387:18:18:632:0:0:0,-5.41854,-10 0|0:61.4667:11:11:401:0:0:0,-3.31133,-10 0|0:37.3843:3:3:106:0:0:0,-0.90309,-9.89333 0|0:67.4873:13:13:465:0:0:0,-3.91339,-10 0|0:46.4152:6:6:205:0:0:0,-1.80618,-10 0|0:99:33:32:1145:0:0:0,-9.63296,-10 0|0:99:30:28:990:0:0:0,-8.42884,-10 0|1:99:28:14:508:14:514:-10,0,-10 0|0:99:28:28:989:0:0:0,-8.42884,-10 0|0:99:25:25:910:0:0:0,-7.52575,-10 0|0:64.477:12:12:433:0:0:0,-3.61236,-10 0|0:97.5825:23:23:828:0:0:0,-6.92369,-10 0|0:99:43:42:1503:0:0:0,-10,-10 0|0:88.5584:20:20:696:0:0:0,-6.0206,-10 0|0:99:40:40:1442:0:0:0,-10,-10 0|0:52.4358:8:8:298:0:0:0,-2.40824,-10 0|0:99:25:25:906:0:0:0,-7.52575,-10 0|0:99:26:26:960:0:0:0,-7.82678,-10 0|0:99:27:27:980:0:0:0,-8.12781,-10 0|0:76.5182:16:16:570:0:0:0,-4.81648,-10 0|0:91.5677:21:21:760:0:0:0,-6.32163,-10 0|0:99:27:27:964:0:0:0,-8.12781,-10 0|0:99:47:47:1689:0:0:0,-10,-10 0|0:34.374:2:2:76:0:0:0,-0.60206,-7.22 0|0:43.4049:5:5:172:0:0:0,-1.50515,-10 0|0:82.5387:18:18:663:0:0:0,-5.41854,-10 0|0:94.5761:22:22:813:0:0:0,-6.62266,-10 0|0:76.5182:16:16:585:0:0:0,-4.81648,-10 0|0:61.4667:11:11:383:0:0:0,-3.31133,-10 0|0:70.4976:14:14:481:0:0:0,-4.21442,-10 0|0:99:32:32:1112:0:0:0,-9.63296,-10 0|0:85.5486:19:19:684:0:0:0,-5.71957,-10 0|0:85.5486:20:19:676:0:0:0,-5.71957,-10 0|0:99:39:39:1413:0:0:0,-10,-10 0|0:82.5387:19:18:675:0:0:0,-5.41854,-10 0|0:73.5079:16:15:557:0:0:0,-4.51545,-10 0|0:99:29:29:1059:0:0:0,-8.72987,-10 0|0:85.5486:19:19:695:0:0:0,-5.71957,-10 0|0:58.4564:10:10:367:0:0:0,-3.0103,-10 0|0:99:40:40:1422:0:0:0,-10,-10 0|0:99:43:42:1487:0:0:0,-10,-10 0|0:73.5079:15:15:536:0:0:0,-4.51545,-10 0|0:99:49:49:1758:0:0:0,-10,-10 0|0:58.4564:11:10:373:0:0:0,-3.0103,-10 0|0:99:42:41:1458:0:0:0,-10,-10 0|0:88.5584:20:20:739:0:0:0,-6.0206,-10 0|0:52.4358:8:8:280:0:0:0,-2.40824,-10 0|0:99:30:30:1064:0:0:0,-9.0309,-10 0|0:61.4667:12:11:407:0:0:0,-3.31133,-10 0|0:99:26:26:927:0:0:0,-7.82678,-10 0|0:61.4667:11:11:380:0:0:0,-3.31133,-10 0|0:82.5387:18:18:658:0:0:0,-5.41854,-10 0|0:67.4873:13:13:469:0:0:0,-3.91339,-10 0|0:99:44:43:1561:0:0:0,-10,-10 0|0:67.4873:14:13:488:0:0:0,-3.91339,-10 0|0:99:37:37:1313:0:0:0,-10,-10 0|0:85.5486:19:19:698:0:0:0,-5.71957,-10 0|0:67.4873:14:13:456:0:0:0,-3.91339,-10 0|0:99:27:27:967:0:0:0,-8.12781,-10 0|0:97.5825:24:23:830:0:0:0,-6.92369,-10 0|0:64.477:12:12:440:0:0:0,-3.61236,-10 0|0:99:35:35:1277:0:0:0,-10,-10 0|0:58.4564:10:10:370:0:0:0,-3.0103,-10 0|0:70.4976:14:14:522:0:0:0,-4.21442,-10 0|0:99:40:39:1413:0:0:0,-10,-10 0|0:99:30:30:1071:0:0:0,-9.0309,-10 0|0:79.5284:17:17:628:0:0:0,-5.11751,-10 0|0:99:48:47:1673:0:0:0,-10,-10 0|0:70.4976:15:14:491:0:0:0,-4.21442,-10 0|0:82.5387:19:18:624:0:0:0,-5.41854,-10 0|0:76.5182:16:16:589:0:0:0,-4.81648,-10 0|0:49.4255:7:7:265:0:0:0,-2.10721,-10 0|0:70.4976:14:14:514:0:0:0,-4.21442,-10 0|0:99:34:34:1239:0:0:0,-10,-10 0|0:99:31:30:1075:0:0:0,-9.0309,-10 0|0:79.5284:17:17:625:0:0:0,-5.11751,-10 0|0:99:24:24:873:0:0:0,-7.22472,-10 0|0:99:25:25:899:0:0:0,-7.52575,-10 0|0:40.3946:4:4:149:0:0:0,-1.20412,-10 0|0:76.5182:16:16:561:0:0:0,-4.81648,-10 0|0:55.4461:9:9:310:0:0:0,-2.70927,-10 0|0:49.4255:7:7:260:0:0:0,-2.10721,-10 0|0:67.4873:13:13:468:0:0:0,-3.91339,-10 0|0:70.4976:14:14:493:0:0:0,-4.21442,-10 0|0:43.4049:5:5:168:0:0:0,-1.50515,-10 scaffold_245 67337 . C A 10483.9 . AB=0.533333;ABP=6.91895;AC=36;AF=0.195652;AN=184;AO=376;CIGAR=1X;DP=1910;DPB=1910;DPRA=1.0042;EPP=7.53805;EPPR=3.28811;GTI=2;LEN=1;MEANALT=1.03571;MQM=60;MQMR=59.921;NS=92;NUMALT=1;ODDS=1.13493;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=13840;QR=56068;RO=1532;RPP=819.484;RPPR=3260.58;RUN=1;SAF=202;SAP=7.53805;SAR=174;SRF=765;SRP=3.01597;SRR=767;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:10.15:23:1:34:22:801:-10,-2.16196,0 1/1:15.6466:10:0:0:10:371:-10,-3.0103,0 0/0:77.3128:23:23:843:0:0:0,-6.92369,-10 1/1:42.7393:19:0:0:19:694:-10,-5.71957,0 0/0:38.179:10:10:377:0:0:0,-3.0103,-10 0/0:47.2099:13:13:494:0:0:0,-3.91339,-10 0/0:99:42:42:1527:0:0:0,-10,-10 0/0:71.2923:21:21:765:0:0:0,-6.32163,-10 0/0:23.1275:5:5:166:0:0:0,-1.50515,-10 0/0:14.0966:2:2:76:0:0:0,-0.60206,-7.22 0/0:35.1687:9:9:317:0:0:0,-2.70927,-10 0/0:26.1378:6:6:210:0:0:0,-1.80618,-10 0/0:99:32:32:1188:0:0:0,-9.63296,-10 0/0:86.3435:26:26:951:0:0:0,-7.82678,-10 0/0:86.3435:26:26:929:0:0:0,-7.82678,-10 0/0:71.2923:21:21:751:0:0:0,-6.32163,-10 1/1:54.7805:23:0:0:23:871:-10,-6.92369,0 0/0:47.2099:13:13:477:0:0:0,-3.91339,-10 0/1:99:20:8:271:11:385:-10,0,-10 0/0:99:43:43:1599:0:0:0,-10,-10 0/1:99:17:11:417:6:221:-10,0,-10 0/0:86.3435:26:26:927:0:0:0,-7.82678,-10 0/0:38.179:10:10:378:0:0:0,-3.0103,-10 0/1:99:31:13:491:18:680:-10,0,-10 0/0:50.2202:14:14:515:0:0:0,-4.21442,-10 0/0:98.3874:30:30:1112:0:0:0,-9.0309,-10 0/0:83.3333:25:25:860:0:0:0,-7.52575,-10 0/0:44.1996:12:12:425:0:0:0,-3.61236,-10 0/0:86.3435:26:26:976:0:0:0,-7.82678,-10 0/0:98.3874:30:30:1111:0:0:0,-9.0309,-10 0/1:0.869714:5:0:0:5:190:-10,-1.50515,0 0/0:41.1893:11:11:418:0:0:0,-3.31133,-10 0/0:77.3128:23:23:836:0:0:0,-6.92369,-10 1/1:24.6775:13:0:0:13:480:-10,-3.91339,0 0/0:65.2717:19:19:708:0:0:0,-5.71957,-10 0/0:29.1481:7:7:264:0:0:0,-2.10721,-10 0/0:47.2099:13:13:434:0:0:0,-3.91339,-10 0/1:99:23:14:485:9:318:-10,0,-10 1/1:42.7393:19:0:0:19:675:-10,-5.71957,0 0/1:99:21:12:425:9:335:-10,0,-10 0/0:99:35:35:1309:0:0:0,-10,-10 0/1:0.222478:19:1:38:18:682:-10,-0.640816,0 0/0:80.3231:24:24:852:0:0:0,-7.22472,-10 0/0:99:41:41:1485:0:0:0,-10,-10 0/1:99:20:10:354:10:362:-10,0,-10 0/0:71.2923:21:21:720:0:0:0,-6.32163,-10 0/0:99:46:46:1700:0:0:0,-10,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:56.2408:16:16:584:0:0:0,-4.81648,-10 0/0:99:35:35:1298:0:0:0,-10,-10 0/0:41.1893:11:11:404:0:0:0,-3.31133,-10 0/0:99:40:40:1450:0:0:0,-10,-10 0/0:29.1481:7:7:266:0:0:0,-2.10721,-10 0/0:20.1172:4:4:152:0:0:0,-1.20412,-10 0/0:99:44:44:1565:0:0:0,-10,-10 0/0:50.2202:14:14:517:0:0:0,-4.21442,-10 0/0:62.2614:18:18:672:0:0:0,-5.41854,-10 0/0:38.179:10:10:358:0:0:0,-3.0103,-10 1/1:60.8011:25:0:0:25:942:-10,-7.52575,0 0/0:38.179:11:10:372:0:0:0,-3.0103,-10 0/0:65.2717:19:19:714:0:0:0,-5.71957,-10 0/0:68.282:20:20:737:0:0:0,-6.0206,-10 0/1:99:39:15:567:24:845:-10,0,-10 0/0:35.9613:18:17:599:1:16:0,-2.56327,-10 1/1:36.7187:17:0:0:17:628:-10,-5.11751,0 0/1:99:34:18:636:16:570:-10,0,-10 0/0:47.2099:13:13:477:0:0:0,-3.91339,-10 1/1:18.6569:11:0:0:11:418:-10,-3.31133,0 0/0:99:42:42:1586:0:0:0,-10,-10 0/0:44.1996:12:12:451:0:0:0,-3.61236,-10 0/0:80.3231:24:24:887:0:0:0,-7.22472,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:83.3333:25:25:938:0:0:0,-7.52575,-10 0/0:50.2202:14:14:532:0:0:0,-4.21442,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:35.1687:9:9:319:0:0:0,-2.70927,-10 0/0:59.2511:17:17:629:0:0:0,-5.11751,-10 0/0:41.1893:11:11:410:0:0:0,-3.31133,-10 0/1:44.8595:7:1:38:6:224:-10,0,-2.53789 0/0:44.1996:12:12:428:0:0:0,-3.61236,-10 0/1:99:48:25:917:23:856:-10,0,-10 0/0:98.3874:30:30:1067:0:0:0,-9.0309,-10 0/1:99:28:13:478:15:558:-10,0,-10 0/1:99:17:7:264:10:378:-10,0,-10 0/1:99:33:13:474:20:747:-10,0,-10 0/0:26.1378:6:6:206:0:0:0,-1.80618,-10 0/0:59.2511:17:17:627:0:0:0,-5.11751,-10 0/0:68.282:20:20:753:0:0:0,-6.0206,-10 0/1:99:10:4:152:6:218:-10,0,-10 0/1:98.1729:21:17:639:4:147:-10,0,-10 0/1:99:12:6:228:6:228:-10,0,-10 0/0:65.2717:19:19:678:0:0:0,-5.71957,-10 scaffold_245 90175 . A T 844.48 . AB=0.533333;ABP=3.58936;AC=2;AF=0.0113636;AN=176;AO=32;CIGAR=1X;DP=1806;DPB=1806;DPRA=1.47766;EPP=4.09604;EPPR=4.68698;GTI=0;LEN=1;MEANALT=1;MQM=59.9688;MQMR=59.9193;NS=88;NUMALT=1;ODDS=3.11373;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1180;QR=64692;RO=1773;RPP=72.4974;RPPR=3844.35;RUN=1;SAF=14;SAP=4.09604;SAR=18;SRF=906;SRP=4.87314;SRR=867;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.3329:17:17:619:0:0:0,-5.11751,-10 0/0:53.302:14:14:515:0:0:0,-4.21442,-10 0/0:74.3741:21:21:781:0:0:0,-6.32163,-10 0/0:47.2814:12:12:420:0:0:0,-3.61236,-10 0/0:50.2917:13:13:489:0:0:0,-3.91339,-10 0/0:44.2711:11:11:408:0:0:0,-3.31133,-10 0/0:99:37:37:1342:0:0:0,-10,-10 0/0:65.3432:18:18:669:0:0:0,-5.41854,-10 0/0:68.3535:19:19:688:0:0:0,-5.71957,-10 0/0:41.2608:10:10:356:0:0:0,-3.0103,-10 0/0:29.2196:6:6:206:0:0:0,-1.80618,-10 0/0:44.2711:11:11:402:0:0:0,-3.31133,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:99:35:35:1304:0:0:0,-10,-10 0/0:65.3432:18:18:664:0:0:0,-5.41854,-10 0/1:99:29:15:509:14:528:-10,0,-10 0/0:95.4468:28:28:1039:0:0:0,-8.42884,-10 0/0:53.302:14:14:477:0:0:0,-4.21442,-10 0/0:98.4507:29:29:1079:0:0:0,-8.72987,-10 0/0:71.3638:20:20:725:0:0:0,-6.0206,-10 0/0:56.3123:15:15:546:0:0:0,-4.51545,-10 0/0:83.4051:24:24:898:0:0:0,-7.22472,-10 0/0:29.2196:6:6:206:0:0:0,-1.80618,-10 0/0:99:30:30:1077:0:0:0,-9.0309,-10 0/0:59.3226:16:16:584:0:0:0,-4.81648,-10 0/0:99:32:32:1157:0:0:0,-9.63296,-10 0/0:77.3844:22:22:777:0:0:0,-6.62266,-10 0/0:62.3329:17:17:599:0:0:0,-5.11751,-10 0/0:59.3226:16:16:560:0:0:0,-4.81648,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:20.1887:3:3:89:0:0:0,-0.90309,-8.30667 0/0:38.2505:9:9:340:0:0:0,-2.70927,-10 0/0:95.4468:28:28:999:0:0:0,-8.42884,-10 0/0:47.2814:12:12:440:0:0:0,-3.61236,-10 0/0:68.3535:19:19:711:0:0:0,-5.71957,-10 0/0:47.2814:12:12:448:0:0:0,-3.61236,-10 0/0:41.2608:10:10:375:0:0:0,-3.0103,-10 0/0:80.3946:23:23:828:0:0:0,-6.92369,-10 0/0:83.4051:24:24:864:0:0:0,-7.22472,-10 0/0:41.2608:10:10:358:0:0:0,-3.0103,-10 0/0:99:36:36:1347:0:0:0,-10,-10 0/0:98.4507:29:29:1034:0:0:0,-8.72987,-10 0/0:62.3329:17:17:637:0:0:0,-5.11751,-10 0/0:99:39:39:1423:0:0:0,-10,-10 0/0:95.4468:28:28:1042:0:0:0,-8.42884,-10 0/0:59.3226:16:16:586:0:0:0,-4.81648,-10 0/0:99:56:56:2098:0:0:0,-10,-10 0/0:56.3123:15:15:560:0:0:0,-4.51545,-10 0/0:14.1681:1:1:36:0:0:0,-0.30103,-3.6 0/0:99:46:46:1726:0:0:0,-10,-10 0/0:41.2608:10:10:368:0:0:0,-3.0103,-10 0/0:99:35:35:1251:0:0:0,-10,-10 0/0:71.3638:20:20:733:0:0:0,-6.0206,-10 0/0:47.2814:12:12:431:0:0:0,-3.61236,-10 0/0:99:46:46:1666:0:0:0,-10,-10 0/0:20.1887:3:3:114:0:0:0,-0.90309,-10 0/0:68.3535:19:19:720:0:0:0,-5.71957,-10 0/0:32.2299:7:7:242:0:0:0,-2.10721,-10 0/0:71.3638:20:20:751:0:0:0,-6.0206,-10 .:.:.:.:.:.:.:. 0/0:99:33:33:1216:0:0:0,-9.93399,-10 0/0:92.4362:27:27:991:0:0:0,-8.12781,-10 0/0:99:49:49:1805:0:0:0,-10,-10 0/0:99:32:32:1147:0:0:0,-9.63296,-10 0/0:53.302:14:14:488:0:0:0,-4.21442,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:77.3844:22:22:766:0:0:0,-6.62266,-10 0/0:50.2917:14:13:476:0:0:0,-3.91339,-10 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:47.2814:12:12:454:0:0:0,-3.61236,-10 0/0:14.1681:1:1:38:0:0:0,-0.30103,-3.8 0/0:20.1887:3:3:112:0:0:0,-0.90309,-10 .:.:.:.:.:.:.:. 0/0:20.1887:3:3:81:0:0:0,-0.90309,-7.56 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:59.3226:16:16:590:0:0:0,-4.81648,-10 0/0:99:31:31:1170:0:0:0,-9.33193,-10 0/0:17.1784:2:2:76:0:0:0,-0.60206,-7.22 0/0:65.3432:18:18:650:0:0:0,-5.41854,-10 0/1:99:31:13:480:18:652:-10,0,-10 0/0:99:39:39:1386:0:0:0,-10,-10 0/0:99:30:30:1118:0:0:0,-9.0309,-10 0/0:99:31:31:1123:0:0:0,-9.33193,-10 0/0:68.3535:19:19:665:0:0:0,-5.71957,-10 0/0:53.302:14:14:501:0:0:0,-4.21442,-10 0/0:53.302:14:14:528:0:0:0,-4.21442,-10 0/0:41.2608:10:10:366:0:0:0,-3.0103,-10 0/0:35.2402:8:8:302:0:0:0,-2.40824,-10 0/0:53.302:14:14:504:0:0:0,-4.21442,-10 0/0:89.4258:26:26:911:0:0:0,-7.82678,-10 0/0:62.3329:17:17:624:0:0:0,-5.11751,-10 scaffold_245 256824 . G A 553.122 . AB=0.705882;ABP=15.5282;AC=4;AF=0.0217391;AN=184;AO=27;CIGAR=1X;DP=1063;DPB=1063;DPRA=0.857428;EPP=3.73412;EPPR=4.12016;GTI=3;LEN=1;MEANALT=1;MQM=59.5185;MQMR=59.9807;NS=92;NUMALT=1;ODDS=4.80169;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=931;QR=38109;RO=1035;RPP=61.6401;RPPR=2155.95;RUN=1;SAF=12;SAP=3.73412;SAR=15;SRF=495;SRP=7.25883;SRR=540;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.6977:12:12:456:0:0:0,-3.61236,-10 0/0:42.6462:7:7:265:0:0:0,-2.10721,-10 0/0:51.6771:10:10:366:0:0:0,-3.0103,-10 0/0:42.6462:7:7:266:0:0:0,-2.10721,-10 0/0:51.6771:10:10:352:0:0:0,-3.0103,-10 0/0:33.6153:4:4:149:0:0:0,-1.20412,-10 0/0:90.811:23:23:850:0:0:0,-6.92369,-10 0/0:66.7286:15:15:555:0:0:0,-4.51545,-10 0/0:48.6668:9:9:342:0:0:0,-2.70927,-10 0/0:27.5947:2:2:76:0:0:0,-0.60206,-7.22 0/0:36.6256:5:5:190:0:0:0,-1.50515,-10 0/0:57.6977:12:12:422:0:0:0,-3.61236,-10 0/0:75.7595:19:18:655:0:0:0,-5.41854,-10 0/0:63.7183:14:14:516:0:0:0,-4.21442,-10 0/0:84.7903:21:21:768:0:0:0,-6.32163,-10 0/0:63.7183:14:14:528:0:0:0,-4.21442,-10 0/0:45.6565:8:8:276:0:0:0,-2.40824,-10 0/0:36.6256:5:5:190:0:0:0,-1.50515,-10 0/0:31.9807:19:17:608:2:32:0,-0.446574,-10 0/0:75.7595:18:18:672:0:0:0,-5.41854,-10 0/0:63.7183:14:14:505:0:0:0,-4.21442,-10 0/0:93.8213:24:24:861:0:0:0,-7.22472,-10 0/0:45.6565:8:8:281:0:0:0,-2.40824,-10 0/0:48.6668:9:9:310:0:0:0,-2.70927,-10 0/0:45.6565:8:8:304:0:0:0,-2.40824,-10 0/0:60.708:13:13:468:0:0:0,-3.91339,-10 0/0:60.708:13:13:476:0:0:0,-3.91339,-10 0/0:48.6668:9:9:340:0:0:0,-2.70927,-10 0/0:45.6565:8:8:296:0:0:0,-2.40824,-10 0/0:90.811:23:23:819:0:0:0,-6.92369,-10 0/0:30.605:3:3:114:0:0:0,-0.90309,-10 0/0:42.6462:7:7:256:0:0:0,-2.10721,-10 0/0:60.708:13:13:485:0:0:0,-3.91339,-10 0/0:39.6359:6:6:221:0:0:0,-1.80618,-10 0/0:51.6771:10:10:369:0:0:0,-3.0103,-10 0/0:36.6256:5:5:190:0:0:0,-1.50515,-10 0/0:39.6359:6:6:228:0:0:0,-1.80618,-10 0/0:63.7183:14:14:504:0:0:0,-4.21442,-10 0/0:54.6874:11:11:389:0:0:0,-3.31133,-10 0/0:48.6668:9:9:297:0:0:0,-2.70927,-10 0/0:81.78:20:20:760:0:0:0,-6.0206,-10 0/0:42.6462:7:7:262:0:0:0,-2.10721,-10 0/0:45.6565:8:8:299:0:0:0,-2.40824,-10 0/0:63.7183:14:14:526:0:0:0,-4.21442,-10 0/0:60.708:13:13:466:0:0:0,-3.91339,-10 0/0:45.6565:8:8:299:0:0:0,-2.40824,-10 0/0:93.8213:24:24:911:0:0:0,-7.22472,-10 0/0:63.7183:14:14:528:0:0:0,-4.21442,-10 0/0:27.5947:2:2:75:0:0:0,-0.60206,-7.125 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:36.6256:5:5:168:0:0:0,-1.50515,-10 0/0:60.708:13:13:486:0:0:0,-3.91339,-10 0/0:51.6771:10:10:370:0:0:0,-3.0103,-10 0/0:30.605:3:3:105:0:0:0,-0.90309,-9.8 0/0:99:37:37:1366:0:0:0,-10,-10 0/0:54.6874:11:11:414:0:0:0,-3.31133,-10 0/0:45.6565:8:8:301:0:0:0,-2.40824,-10 0/0:0.0351918:7:6:228:1:16:-0.337888,0,-10 0/0:72.7492:17:17:621:0:0:0,-5.11751,-10 0/0:48.6668:9:9:334:0:0:0,-2.70927,-10 0/1:99:12:4:152:8:303:-10,0,-10 0/0:48.6668:9:9:331:0:0:0,-2.70927,-10 0/0:90.811:23:23:864:0:0:0,-6.92369,-10 0/1:99:9:5:188:4:152:-10,0,-10 0/0:36.6256:5:5:190:0:0:0,-1.50515,-10 0/0:69.7389:16:16:608:0:0:0,-4.81648,-10 0/0:63.7183:14:14:485:0:0:0,-4.21442,-10 0/1:4.93279e-06:8:1:15:7:261:-10,-0.00514998,0 0/0:75.7595:18:18:665:0:0:0,-5.41854,-10 0/0:30.605:3:3:114:0:0:0,-0.90309,-10 0/0:45.6565:8:8:304:0:0:0,-2.40824,-10 0/0:87.8007:22:22:789:0:0:0,-6.62266,-10 0/0:51.6771:10:10:380:0:0:0,-3.0103,-10 0/0:54.6874:11:11:415:0:0:0,-3.31133,-10 0/0:57.6977:12:12:421:0:0:0,-3.61236,-10 0/0:42.6462:7:7:266:0:0:0,-2.10721,-10 0/0:42.6462:7:7:257:0:0:0,-2.10721,-10 0/0:45.6565:8:8:304:0:0:0,-2.40824,-10 0/0:36.6256:5:5:190:0:0:0,-1.50515,-10 0/0:45.6565:8:8:285:0:0:0,-2.40824,-10 0/0:84.7903:21:21:791:0:0:0,-6.32163,-10 0/0:63.7183:14:14:507:0:0:0,-4.21442,-10 0/0:69.7389:16:16:606:0:0:0,-4.81648,-10 0/0:48.6668:9:9:319:0:0:0,-2.70927,-10 0/0:57.6977:12:12:452:0:0:0,-3.61236,-10 0/1:8.39002e-05:5:0:0:5:167:-10,-1.50515,0 0/0:72.7492:17:17:645:0:0:0,-5.11751,-10 0/0:42.6462:7:7:264:0:0:0,-2.10721,-10 0/0:39.6359:6:6:220:0:0:0,-1.80618,-10 0/0:60.708:13:13:449:0:0:0,-3.91339,-10 0/0:57.6977:12:12:456:0:0:0,-3.61236,-10 0/0:57.6977:12:12:449:0:0:0,-3.61236,-10 scaffold_245 258949 . C T 609.81 . AB=0.543478;ABP=3.76559;AC=3;AF=0.0163043;AN=184;AO=30;CIGAR=1X;DP=1365;DPB=1365;DPRA=1.2;EPP=3.29983;EPPR=3.72869;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9805;NS=92;NUMALT=1;ODDS=4.62252;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1032;QR=47964;RO=1333;RPP=68.1545;RPPR=2888.9;RUN=1;SAF=14;SAP=3.29983;SAR=16;SRF=676;SRP=3.59837;SRR=657;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.0086:16:16:583:0:0:0,-4.81648,-10 0/0:36.8953:5:5:189:0:0:0,-1.50515,-10 0/0:0.042218:16:15:559:1:38:-0.18764,0,-10 0/0:36.8953:5:5:168:0:0:0,-1.50515,-10 0/0:51.9468:10:10:345:0:0:0,-3.0103,-10 0/0:42.9159:7:7:242:0:0:0,-2.10721,-10 0/0:73.9848:27:26:954:1:15:0,-5.19645,-10 0/0:91.0802:23:23:850:0:0:0,-6.92369,-10 0/0:48.9365:9:9:312:0:0:0,-2.70927,-10 0/0:27.8644:2:2:76:0:0:0,-0.60206,-7.22 0/0:39.9056:6:6:206:0:0:0,-1.80618,-10 0/0:30.8747:3:3:114:0:0:0,-0.90309,-10 0/0:88.0704:22:22:776:0:0:0,-6.62266,-10 0/0:99:33:33:1192:0:0:0,-9.93399,-10 0/0:97.0991:25:25:877:0:0:0,-7.52575,-10 0/0:94.0899:24:24:905:0:0:0,-7.22472,-10 0/0:82.0498:20:20:694:0:0:0,-6.0206,-10 0/0:33.885:4:4:152:0:0:0,-1.20412,-10 0/0:48.9365:9:9:330:0:0:0,-2.70927,-10 0/0:99:26:26:908:0:0:0,-7.82678,-10 0/0:63.988:14:14:517:0:0:0,-4.21442,-10 0/0:88.0704:22:22:758:0:0:0,-6.62266,-10 0/0:51.9468:10:10:356:0:0:0,-3.0103,-10 0/0:70.0086:16:16:566:0:0:0,-4.81648,-10 0/0:82.0498:20:20:735:0:0:0,-6.0206,-10 0/0:99:26:26:929:0:0:0,-7.82678,-10 0/0:60.9777:13:13:452:0:0:0,-3.91339,-10 0/0:45.9262:8:8:300:0:0:0,-2.40824,-10 0/0:51.9468:10:10:368:0:0:0,-3.0103,-10 0/0:99:31:31:1151:0:0:0,-9.33193,-10 0/0:36.8953:5:5:174:0:0:0,-1.50515,-10 0/0:39.9056:6:6:228:0:0:0,-1.80618,-10 0/0:60.9777:13:13:489:0:0:0,-3.91339,-10 0/0:39.9056:6:6:224:0:0:0,-1.80618,-10 0/0:45.9262:8:8:303:0:0:0,-2.40824,-10 0/0:39.9056:6:6:209:0:0:0,-1.80618,-10 0/0:39.9056:6:6:205:0:0:0,-1.80618,-10 0/0:88.0704:22:22:797:0:0:0,-6.62266,-10 0/0:48.9365:9:9:334:0:0:0,-2.70927,-10 0/0:60.9777:13:13:464:0:0:0,-3.91339,-10 0/0:73.0189:17:17:641:0:0:0,-5.11751,-10 0/0:66.9983:15:15:523:0:0:0,-4.51545,-10 0/0:76.0292:18:18:621:0:0:0,-5.41854,-10 0/0:97.0991:25:25:941:0:0:0,-7.52575,-10 0/0:66.9983:15:15:509:0:0:0,-4.51545,-10 0/0:79.0395:19:19:703:0:0:0,-5.71957,-10 0/0:88.0704:23:22:788:0:0:0,-6.62266,-10 0/1:99:20:11:417:9:333:-10,0,-10 0/1:0.00026941:8:0:0:8:299:-10,-2.40824,0 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:54.9571:11:11:398:0:0:0,-3.31133,-10 0/0:99:39:39:1395:0:0:0,-10,-10 0/0:54.9571:11:11:392:0:0:0,-3.31133,-10 0/0:45.9262:8:8:292:0:0:0,-2.40824,-10 0/0:99:30:29:952:0:0:0,-8.72987,-10 0/0:39.9056:6:6:218:0:0:0,-1.80618,-10 0/1:99:18:10:358:8:302:-10,0,-10 0/0:48.9365:9:9:339:0:0:0,-2.70927,-10 0/0:60.9777:13:13:472:0:0:0,-3.91339,-10 0/0:33.885:4:4:147:0:0:0,-1.20412,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:37.7033:14:13:444:1:15:0,-1.56829,-10 0/0:91.0802:23:23:833:0:0:0,-6.92369,-10 0/0:54.9571:11:11:391:0:0:0,-3.31133,-10 0/0:42.9159:7:7:266:0:0:0,-2.10721,-10 0/0:94.0899:24:24:838:0:0:0,-7.22472,-10 0/0:73.0189:17:17:614:0:0:0,-5.11751,-10 0/0:54.9571:11:11:408:0:0:0,-3.31133,-10 0/0:94.0899:24:24:809:0:0:0,-7.22472,-10 0/0:45.9262:8:8:303:0:0:0,-2.40824,-10 0/0:88.0704:22:22:793:0:0:0,-6.62266,-10 0/0:65.4654:24:23:836:1:15:0,-4.34451,-10 0/0:63.988:14:14:483:0:0:0,-4.21442,-10 0/0:51.9468:10:10:369:0:0:0,-3.0103,-10 0/0:85.06:21:21:784:0:0:0,-6.32163,-10 0/0:45.9262:8:8:299:0:0:0,-2.40824,-10 0/0:73.0189:17:17:638:0:0:0,-5.11751,-10 0/0:39.9056:6:6:228:0:0:0,-1.80618,-10 0/0:42.9159:7:7:266:0:0:0,-2.10721,-10 0/0:45.9262:8:8:293:0:0:0,-2.40824,-10 0/0:85.06:21:21:729:0:0:0,-6.32163,-10 0/0:88.0704:22:22:789:0:0:0,-6.62266,-10 0/0:57.9674:12:12:436:0:0:0,-3.61236,-10 0/0:70.0086:16:16:587:0:0:0,-4.81648,-10 0/0:57.9674:12:12:434:0:0:0,-3.61236,-10 0/0:48.9365:9:9:320:0:0:0,-2.70927,-10 0/0:73.0189:17:17:574:0:0:0,-5.11751,-10 0/0:33.885:4:4:151:0:0:0,-1.20412,-10 0/0:45.9262:8:8:296:0:0:0,-2.40824,-10 0/0:88.0704:22:22:793:0:0:0,-6.62266,-10 0/0:66.9983:15:15:519:0:0:0,-4.51545,-10 0/0:35.0148:13:12:425:1:15:0,-1.29945,-10 scaffold_245 273429 . C CA 3617.77 . AB=0.557047;ABP=7.22208;AC=15;AF=0.0815217;AN=184;AO=140;CIGAR=1M1I2M;DP=1662;DPB=1711;DPRA=1.06499;EPP=6.05036;EPPR=3.70448;GTI=2;LEN=1;MEANALT=1.36364;MQM=60;MQMR=59.9967;NS=92;NUMALT=1;ODDS=0.110457;PAIRED=0;PAIREDR=0;PAO=1.5;PQA=57;PQR=57;PRO=1.5;QA=4998;QR=55575;RO=1514;RPP=289.893;RPPR=3102.31;RUN=1;SAF=77;SAP=6.05036;SAR=63;SRF=746;SRP=3.70448;SRR=768;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:60.1613:16:16:598:0:0:0,-4.81648,-10 0|0:30.0583:6:6:226:0:0:0,-1.80618,-10 0|0:84.2436:24:24:864:0:0:0,-7.22472,-10 0|0:54.1407:14:14:508:0:0:0,-4.21442,-10 0|0:36.0789:8:8:280:0:0:0,-2.40824,-10 0|0:24.0377:4:4:151:0:0:0,-1.20412,-10 0|0:99:33:33:1208:0:0:0,-9.93399,-10 0|0:90.2638:26:26:950:0:0:0,-7.82678,-10 0|0:63.1716:17:17:621:0:0:0,-5.11751,-10 0|0:33.0686:7:7:253:0:0:0,-2.10721,-10 0|0:42.0995:10:10:366:0:0:0,-3.0103,-10 0|0:36.0789:8:8:303:0:0:0,-2.40824,-10 0|0:99:29:29:1051:0:0:0,-8.72987,-10 0|0:87.2537:25:25:879:0:0:0,-7.52575,-10 0|0:84.2436:24:24:894:0:0:0,-7.22472,-10 0|0:72.2025:20:20:691:0:0:0,-6.0206,-10 0|0:63.1716:17:17:615:0:0:0,-5.11751,-10 0|0:54.1407:14:14:520:0:0:0,-4.21442,-10 0|0:99:30:30:1128:0:0:0,-9.0309,-10 0|0:99:29:29:1071:0:0:0,-8.72987,-10 0|1:99:21:7:264:14:523:-10,0,-10 0|0:90.2638:26:26:961:0:0:0,-7.82678,-10 0|0:33.0686:7:7:264:0:0:0,-2.10721,-10 0|0:51.1304:13:13:480:0:0:0,-3.91339,-10 0|0:57.151:15:15:568:0:0:0,-4.51545,-10 0|0:87.2537:25:25:889:0:0:0,-7.52575,-10 0|0:57.151:15:15:536:0:0:0,-4.51545,-10 0|0:63.1716:17:17:608:0:0:0,-5.11751,-10 1|1:22.0855:20:0:0:17:615:-10,-5.11751,0 0|1:99:25:15:548:10:348:-10,0,-10 0|0:33.0686:7:7:245:0:0:0,-2.10721,-10 0|0:33.0686:7:7:252:0:0:0,-2.10721,-10 0|0:57.151:15:15:538:0:0:0,-4.51545,-10 0|0:36.0789:8:8:300:0:0:0,-2.40824,-10 1|1:13.0546:15:0:0:14:498:-10,-4.21442,0 0|0:21.0274:3:3:109:0:0:0,-0.90309,-10 0|1:1.81696:13:0:0:13:454:-10,-3.91339,0 0|0:96.2827:28:28:1042:0:0:0,-8.42884,-10 0|0:60.1613:16:16:570:0:0:0,-4.81648,-10 0|0:57.151:15:15:561:0:0:0,-4.51545,-10 0|0:99:30:30:1102:0:0:0,-9.0309,-10 0|0:63.1716:17:17:632:0:0:0,-5.11751,-10 0|0:60.1613:16:16:596:0:0:0,-4.81648,-10 0|0:90.2638:26:26:977:0:0:0,-7.82678,-10 0|0:66.1819:18:18:663:0:0:0,-5.41854,-10 0|1:99:12:7:263:5:163:-10,0,-10 0|1:99:36:14:520:22:771:-10,0,-10 0|0:84.2436:24:24:874:0:0:0,-7.22472,-10 0|0:69.1922:19:19:695:0:0:0,-5.71957,-10 0|0:96.2827:28:28:1022:0:0:0,-8.42884,-10 0|0:45.1098:11:11:394:0:0:0,-3.31133,-10 0|0:99:37:37:1382:0:0:0,-10,-10 0|0:42.0995:10:10:364:0:0:0,-3.0103,-10 0|1:0.00580378:5:0:0:5:190:-10,-1.50515,0 0|1:99:37:23:838:14:512:-10,0,-10 0|0:69.1922:19:19:714:0:0:0,-5.71957,-10 0|0:45.1098:11:11:393:0:0:0,-3.31133,-10 0|0:48.1201:13:12:451:0:0:0,-3.61236,-10 0|0:78.2231:22:22:796:0:0:0,-6.62266,-10 0|0:36.0789:8:8:299:0:0:0,-2.40824,-10 0|0:96.2827:28:28:1038:0:0:0,-8.42884,-10 0|0:81.2334:23:23:865:0:0:0,-6.92369,-10 0|0:99:34:34:1253:0:0:0,-10,-10 0|0:57.151:15:15:568:0:0:0,-4.51545,-10 0|0:48.1201:12:12:450:0:0:0,-3.61236,-10 0|0:99:31:31:1142:0:0:0,-9.33193,-10 0|0:75.2128:21:21:774:0:0:0,-6.32163,-10 0|0:45.1098:11:11:401:0:0:0,-3.31133,-10 0|0:99:38:38:1372:0:0:0,-10,-10 0|0:51.1304:13:13:468:0:0:0,-3.91339,-10 0|0:72.2025:21:20:745:0:0:0,-6.0206,-10 0|0:99:30:30:1114:0:0:0,-9.0309,-10 0|0:69.1922:19:19:692:0:0:0,-5.71957,-10 0|0:69.1922:19:19:702:0:0:0,-5.71957,-10 0|0:78.2231:22:22:825:0:0:0,-6.62266,-10 0|0:39.0892:9:9:334:0:0:0,-2.70927,-10 0|0:60.1613:16:16:583:0:0:0,-4.81648,-10 0|0:42.0995:11:10:370:0:0:0,-3.0103,-10 0|0:33.0686:7:7:241:0:0:0,-2.10721,-10 0|0:33.0686:7:7:255:0:0:0,-2.10721,-10 0|0:99:31:31:1153:0:0:0,-9.33193,-10 0|0:90.2638:26:26:971:0:0:0,-7.82678,-10 0|0:63.1716:17:17:630:0:0:0,-5.11751,-10 0|0:63.1716:17:17:611:0:0:0,-5.11751,-10 0|0:81.2334:24:23:831:0:0:0,-6.92369,-10 0|0:24.0377:4:4:137:0:0:0,-1.20412,-10 1|1:10.0443:13:0:0:13:487:-10,-3.91339,0 1|1:10.0443:13:0:0:13:437:-10,-3.91339,0 0|0:39.0892:9:9:339:0:0:0,-2.70927,-10 0|0:57.151:15:15:551:0:0:0,-4.51545,-10 0|0:54.1407:14:14:517:0:0:0,-4.21442,-10 0|0:75.2128:21:21:756:0:0:0,-6.32163,-10 scaffold_245 280273 . C T 255.762 . AB=0.55;ABP=3.44459;AC=1;AF=0.00543478;AN=184;AO=14;CIGAR=1X;DP=1655;DPB=1655;DPRA=1.14685;EPP=8.59409;EPPR=9.87427;GTI=1;LEN=1;MEANALT=1.25;MQM=57.4286;MQMR=59.9622;NS=92;NUMALT=1;ODDS=7.17517;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=471;QR=60411;RO=1640;RPP=33.4109;RPPR=3512.3;RUN=1;SAF=10;SAP=8.59409;SAR=4;SRF=790;SRP=7.77695;SRR=850;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.7106:13:13:449:0:0:0,-3.91339,-10 0/0:73.7209:14:14:529:0:0:0,-4.21442,-10 0/0:70.7106:13:13:471:0:0:0,-3.91339,-10 0/0:43.6179:4:4:143:0:0:0,-1.20412,-10 0/0:85.7619:18:18:639:0:0:0,-5.41854,-10 0/0:52.6488:7:7:264:0:0:0,-2.10721,-10 0/0:99:25:25:925:0:0:0,-7.52575,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:88.772:19:19:716:0:0:0,-5.71957,-10 0/0:49.6385:6:6:226:0:0:0,-1.80618,-10 0/0:0.00332187:7:5:190:1:16:-0.416971,0,-10 0/0:58.6694:9:9:328:0:0:0,-2.70927,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:97.7999:22:22:815:0:0:0,-6.62266,-10 0/0:94.7913:21:21:792:0:0:0,-6.32163,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:88.772:19:19:720:0:0:0,-5.71957,-10 0/1:99:20:9:334:11:402:-10,0,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:67.7003:12:12:433:0:0:0,-3.61236,-10 0/0:99:25:25:949:0:0:0,-7.52575,-10 0/0:64.69:11:11:408:0:0:0,-3.31133,-10 0/0:76.7312:15:15:546:0:0:0,-4.51545,-10 0/0:94.7913:21:21:776:0:0:0,-6.32163,-10 0/0:73.7209:14:14:475:0:0:0,-4.21442,-10 0/0:91.7819:20:20:737:0:0:0,-6.0206,-10 0/0:64.69:11:11:396:0:0:0,-3.31133,-10 0/0:85.7619:18:18:684:0:0:0,-5.41854,-10 0/0:99:38:38:1368:0:0:0,-10,-10 0/0:40.6076:3:3:114:0:0:0,-0.90309,-10 0/0:58.6694:9:9:333:0:0:0,-2.70927,-10 0/0:88.772:19:19:661:0:0:0,-5.71957,-10 0/0:76.7312:15:15:568:0:0:0,-4.51545,-10 0/0:76.7312:15:15:546:0:0:0,-4.51545,-10 0/0:55.6591:8:8:295:0:0:0,-2.40824,-10 0/0:49.6385:6:6:206:0:0:0,-1.80618,-10 0/0:99:34:34:1279:0:0:0,-10,-10 0/0:58.6694:9:9:342:0:0:0,-2.70927,-10 0/0:82.7517:17:17:646:0:0:0,-5.11751,-10 0/0:82.7517:17:17:618:0:0:0,-5.11751,-10 0/0:76.7312:15:15:544:0:0:0,-4.51545,-10 0/0:85.7619:18:18:658:0:0:0,-5.41854,-10 0/0:99:24:24:906:0:0:0,-7.22472,-10 0/0:88.772:19:19:720:0:0:0,-5.71957,-10 0/0:85.7619:18:18:668:0:0:0,-5.41854,-10 0/0:99:37:37:1391:0:0:0,-10,-10 0/0:99:23:23:871:0:0:0,-6.92369,-10 0/0:73.7209:14:14:509:0:0:0,-4.21442,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:46.6282:5:5:190:0:0:0,-1.50515,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:55.6591:8:8:304:0:0:0,-2.40824,-10 0/0:55.6591:8:8:282:0:0:0,-2.40824,-10 0/0:99:34:34:1277:0:0:0,-10,-10 0/0:73.7209:14:14:500:0:0:0,-4.21442,-10 0/0:79.7415:16:16:584:0:0:0,-4.81648,-10 0/0:88.772:19:19:677:0:0:0,-5.71957,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:70.7106:13:13:479:0:0:0,-3.91339,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:94.7913:21:21:774:0:0:0,-6.32163,-10 0/0:99:36:36:1351:0:0:0,-10,-10 0/0:61.6797:10:10:351:0:0:0,-3.0103,-10 0/0:64.69:11:11:417:0:0:0,-3.31133,-10 0/0:99:34:34:1236:0:0:0,-10,-10 0/0:85.7619:18:18:658:0:0:0,-5.41854,-10 0/0:70.7106:13:13:482:0:0:0,-3.91339,-10 0/0:99:32:32:1190:0:0:0,-9.63296,-10 0/0:52.6488:7:7:244:0:0:0,-2.10721,-10 0/0:91.7819:20:20:746:0:0:0,-6.0206,-10 0/0:99:29:29:1102:0:0:0,-8.72987,-10 0/0:99:24:24:892:0:0:0,-7.22472,-10 0/0:82.7517:17:17:610:0:0:0,-5.11751,-10 0/0:99:26:26:931:0:0:0,-7.82678,-10 0/0:73.7209:14:14:532:0:0:0,-4.21442,-10 0/0:73.7209:14:14:518:0:0:0,-4.21442,-10 0/0:70.7106:13:13:483:0:0:0,-3.91339,-10 0/0:49.6385:6:6:214:0:0:0,-1.80618,-10 0/0:64.69:11:11:395:0:0:0,-3.31133,-10 0/0:72.8732:30:29:1079:1:38:0,-3.75378,-10 0/0:81.6134:25:24:828:1:15:0,-4.62781,-10 0/0:91.7819:20:20:691:0:0:0,-6.0206,-10 0/0:99:23:23:830:0:0:0,-6.92369,-10 0/0:64.69:11:11:411:0:0:0,-3.31133,-10 0/0:49.6385:6:6:206:0:0:0,-1.80618,-10 0/0:76.7312:15:15:566:0:0:0,-4.51545,-10 0/0:76.7312:15:15:546:0:0:0,-4.51545,-10 0/0:55.6591:8:8:296:0:0:0,-2.40824,-10 0/0:61.6797:10:10:370:0:0:0,-3.0103,-10 0/0:79.7415:16:16:605:0:0:0,-4.81648,-10 0/0:82.7517:17:17:635:0:0:0,-5.11751,-10 scaffold_245 391142 . C T 14542.1 . AB=0.497976;ABP=3.02788;AC=60;AF=0.326087;AN=184;AO=518;CIGAR=1X;DP=1568;DPB=1568;DPRA=1.20884;EPP=3.07737;EPPR=6.31921;GTI=0;LEN=1;MEANALT=1;MQM=59.9981;MQMR=60;NS=92;NUMALT=1;ODDS=1.34975;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=18962;QR=38313;RO=1050;RPP=1127.83;RPPR=2274.38;RUN=1;SAF=261;SAP=3.07737;SAR=257;SRF=506;SRP=5.99659;SRR=544;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.9055:15:15:540:0:0:0,-4.51545,-10 1/1:41.9407:17:0:0:17:620:-10,-5.11751,0 0/1:99:15:11:362:4:152:-10,0,-10 0/0:22.8231:7:7:261:0:0:0,-2.10721,-10 0/1:99:20:13:435:7:262:-10,0,-10 1/1:26.8892:12:0:0:12:456:-10,-3.61236,0 1/1:63.0128:24:0:0:24:865:-10,-7.22472,0 0/1:99:30:11:400:19:706:-10,0,-10 1/1:32.9098:14:0:0:14:483:-10,-4.21442,0 0/0:31.854:10:10:375:0:0:0,-3.0103,-10 0/0:22.8231:7:7:237:0:0:0,-2.10721,-10 1/1:35.9201:15:0:0:15:539:-10,-4.51545,0 0/0:95.068:31:31:1127:0:0:0,-9.33193,-10 0/1:99:29:15:531:14:525:-10,0,-10 0/0:99:37:37:1373:0:0:0,-10,-10 0/1:99:18:10:377:8:304:-10,0,-10 0/1:99:25:14:522:11:405:-10,0,-10 1/1:11.8377:7:0:0:7:265:-10,-2.10721,0 0/0:64.9673:21:21:747:0:0:0,-6.32163,-10 0/1:99:31:17:626:14:510:-10,0,-10 0/0:43.8952:14:14:494:0:0:0,-4.21442,-10 0/1:99:27:16:604:11:394:-10,0,-10 0/1:31.4688:10:1:38:9:342:-10,0,-1.7897 0/1:99:20:8:280:12:451:-10,0,-10 0/0:55.9364:18:18:668:0:0:0,-5.41854,-10 0/1:99:30:15:530:15:569:-10,0,-10 0/0:37.8746:12:12:432:0:0:0,-3.61236,-10 1/1:23.8789:11:0:0:11:418:-10,-3.31133,0 0/0:80.0187:26:26:940:0:0:0,-7.82678,-10 0/0:92.0604:30:30:1098:0:0:0,-9.0309,-10 1/1:11.8377:7:0:0:7:259:-10,-2.10721,0 0/0:22.8231:7:7:262:0:0:0,-2.10721,-10 0/0:40.8849:13:13:490:0:0:0,-3.91339,-10 0/0:16.8025:5:5:190:0:0:0,-1.50515,-10 0/0:46.9055:15:15:526:0:0:0,-4.51545,-10 0/0:28.8437:9:9:339:0:0:0,-2.70927,-10 0/0:25.8334:8:8:271:0:0:0,-2.40824,-10 0/0:27.9568:25:24:886:1:38:0,-2.32781,-10 1/1:35.9201:15:0:0:15:533:-10,-4.51545,0 0/0:58.9467:19:19:676:0:0:0,-5.71957,-10 0/1:99:23:8:300:15:518:-10,0,-10 0/0:46.9055:15:15:559:0:0:0,-4.51545,-10 1/1:23.8789:11:0:0:11:396:-10,-3.31133,0 0/0:67.9776:22:22:831:0:0:0,-6.62266,-10 0/0:52.9261:17:17:644:0:0:0,-5.11751,-10 0/1:99:18:11:411:7:266:-10,0,-10 0/1:99:34:15:514:19:722:-10,0,-10 1/1:53.9819:21:0:0:21:764:-10,-6.32163,0 1/1:29.8995:13:0:0:13:476:-10,-3.91339,0 0/0:89.0499:29:29:1070:0:0:0,-8.72987,-10 0/0:19.8128:6:6:228:0:0:0,-1.80618,-10 0/1:99:29:10:377:19:721:-10,0,-10 0/0:46.9055:15:15:558:0:0:0,-4.51545,-10 0/0:19.8128:6:6:228:0:0:0,-1.80618,-10 0/1:99:28:19:700:9:313:-10,0,-10 0/0:58.9467:19:19:662:0:0:0,-5.71957,-10 1/1:66.0231:25:0:0:25:905:-10,-7.52575,0 0/0:13.7922:4:4:148:0:0:0,-1.20412,-10 0/0:58.9467:19:19:717:0:0:0,-5.71957,-10 1/1:20.8686:10:0:0:10:367:-10,-3.0103,0 0/0:61.957:20:20:745:0:0:0,-6.0206,-10 0/0:31.854:10:10:358:0:0:0,-3.0103,-10 0/0:95.068:31:31:1154:0:0:0,-9.33193,-10 0/0:31.854:10:10:373:0:0:0,-3.0103,-10 0/0:22.8231:7:7:266:0:0:0,-2.10721,-10 0/1:99:36:19:712:17:643:-10,0,-10 0/1:99:10:5:167:5:167:-10,0,-10 0/0:34.8643:11:11:380:0:0:0,-3.31133,-10 0/0:67.9776:22:22:814:0:0:0,-6.62266,-10 0/0:34.8643:11:11:390:0:0:0,-3.31133,-10 0/0:49.9158:16:16:606:0:0:0,-4.81648,-10 0/0:73.9982:24:24:881:0:0:0,-7.22472,-10 0/0:80.0187:26:26:915:0:0:0,-7.82678,-10 0/0:43.8952:14:14:503:0:0:0,-4.21442,-10 0/0:40.8849:13:13:484:0:0:0,-3.91339,-10 0/0:19.8128:6:6:190:0:0:0,-1.80618,-10 1/1:47.9613:19:0:0:19:674:-10,-5.71957,0 0/0:34.8643:11:11:417:0:0:0,-3.31133,-10 0/0:10.7819:3:3:103:0:0:0,-0.90309,-9.61333 1/1:8.8274:6:0:0:6:224:-10,-1.80618,0 0/1:99:21:8:292:13:445:-10,0,-10 0/0:77.0084:25:25:847:0:0:0,-7.52575,-10 1/1:44.951:18:0:0:18:673:-10,-5.41854,0 0/1:99:18:13:475:5:165:-10,0,-10 0/0:70.9879:23:23:870:0:0:0,-6.92369,-10 1/1:26.8892:12:0:0:12:425:-10,-3.61236,0 0/0:28.8437:9:9:342:0:0:0,-2.70927,-10 0/0:34.8643:11:11:392:0:0:0,-3.31133,-10 0/1:99:8:4:149:4:144:-10,0,-10 0/1:99:14:5:190:9:340:-10,0,-10 0/0:58.9467:19:19:714:0:0:0,-5.71957,-10 1/1:32.9098:14:0:0:14:518:-10,-4.21442,0 scaffold_245 417410 . T A 13638.3 . AB=0.456274;ABP=11.7457;AC=32;AF=0.173913;AN=184;AO=484;CIGAR=1X;DP=2994;DPB=2994;DPRA=1.1592;EPP=4.80491;EPPR=9.56629;GTI=0;LEN=1;MEANALT=1.04;MQM=59.6178;MQMR=59.99;NS=92;NUMALT=1;ODDS=2.35228;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17682;QR=92006;RO=2507;RPP=1054;RPPR=5446.89;RUN=1;SAF=232;SAP=4.80491;SAR=252;SRF=1210;SRP=9.56629;SRR=1297;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.1072:21:21:781:0:0:0,-6.32163,-10 0/0:55.0454:15:15:533:0:0:0,-4.51545,-10 0/0:99:36:36:1359:0:0:0,-10,-10 0/0:70.0969:20:20:755:0:0:0,-6.0206,-10 0/0:91.1663:27:27:1015:0:0:0,-8.12781,-10 1/1:43.9694:25:0:0:25:924:-10,-7.52575,0 0/1:99:56:30:1135:26:969:-10,0,-10 0/1:99:53:30:1087:23:862:-10,0,-10 1/1:28.9179:20:0:0:20:729:-10,-6.0206,0 0/0:43.0042:11:11:412:0:0:0,-3.31133,-10 0/0:67.0866:19:19:695:0:0:0,-5.71957,-10 0/0:49.0248:13:13:472:0:0:0,-3.91339,-10 0/0:99:45:45:1643:0:0:0,-10,-10 0/0:99:52:51:1857:0:0:0,-10,-10 0/0:99:48:48:1767:0:0:0,-10,-10 0/1:99:31:15:558:16:601:-10,0,-10 0/0:99:51:50:1812:0:0:0,-10,-10 0/0:49.0248:13:13:472:0:0:0,-3.91339,-10 0/0:99:45:45:1692:0:0:0,-10,-10 0/0:99:70:70:2585:0:0:0,-10,-10 0/0:79.1276:23:23:873:0:0:0,-6.92369,-10 0/0:99:52:52:1901:0:0:0,-10,-10 1/1:59.0209:30:0:0:30:1104:-10,-9.0309,0 0/0:99:40:40:1411:0:0:0,-10,-10 0/0:91.1663:27:27:973:0:0:0,-8.12781,-10 0/1:99:52:27:977:24:868:-10,0,-10 0/0:91.1663:27:27:1012:0:0:0,-8.12781,-10 1/1:10.8561:14:0:0:14:515:-10,-4.21442,0 0/0:99:32:32:1196:0:0:0,-9.63296,-10 0/0:99:45:45:1625:0:0:0,-10,-10 1/1:19.887:17:0:0:17:601:-10,-5.11751,0 0/0:30.963:7:7:266:0:0:0,-2.10721,-10 0/0:83.7943:34:33:1227:1:16:0,-7.10354,-10 0/0:76.1175:22:22:783:0:0:0,-6.62266,-10 0/0:99:32:32:1148:0:0:0,-9.63296,-10 0/0:36.9836:9:9:330:0:0:0,-2.70927,-10 0/0:46.0145:12:12:429:0:0:0,-3.61236,-10 0/0:99:43:43:1585:0:0:0,-10,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/1:99:22:12:450:10:367:-10,0,-10 0/0:99:44:44:1600:0:0:0,-10,-10 0/1:36.6615:31:28:1055:3:114:-4.9608,0,-10 0/0:67.0866:19:19:684:0:0:0,-5.71957,-10 1/1:80.0928:37:0:0:37:1366:-10,-10,0 0/0:91.1663:27:27:1020:0:0:0,-8.12781,-10 0/0:99:35:35:1278:0:0:0,-10,-10 0/0:99:63:63:2329:0:0:0,-10,-10 0/1:99:37:17:644:20:731:-10,0,-10 1/1:59.0209:30:0:0:30:1075:-10,-9.0309,0 0/1:99:65:31:1131:34:1204:-10,0,-10 0/0:64.0763:18:18:671:0:0:0,-5.41854,-10 0/1:99:46:21:756:25:914:-10,0,-10 0/0:76.1175:22:22:787:0:0:0,-6.62266,-10 0/0:55.0454:15:15:542:0:0:0,-4.51545,-10 0/0:99:54:54:2000:0:0:0,-10,-10 1/1:13.8996:24:1:16:23:844:-10,-4.24451,0 0/1:99:33:20:705:13:484:-10,0,-10 0/0:55.0454:15:15:556:0:0:0,-4.51545,-10 1/1:34.9385:22:0:0:22:811:-10,-6.62266,0 0/0:85.1477:25:25:929:0:0:0,-7.52575,-10 0/0:99:59:58:2174:1:16:0,-10,-10 0/0:97.1787:29:29:1086:0:0:0,-8.72987,-10 0/1:99:39:23:818:16:573:-10,0,-10 0/0:76.1175:22:22:813:0:0:0,-6.62266,-10 0/0:76.1175:22:22:831:0:0:0,-6.62266,-10 0/0:99:56:56:2058:0:0:0,-10,-10 0/0:99:57:57:2113:0:0:0,-10,-10 0/0:58.0557:16:16:594:0:0:0,-4.81648,-10 0/0:99:60:60:2198:0:0:0,-10,-10 0/0:55.0454:15:15:543:0:0:0,-4.51545,-10 0/0:99:41:41:1435:0:0:0,-10,-10 0/0:99:44:44:1618:0:0:0,-10,-10 0/0:99:41:41:1545:0:0:0,-10,-10 0/0:73.1072:21:21:764:0:0:0,-6.32163,-10 0/0:99:39:39:1398:0:0:0,-10,-10 0/0:82.1381:24:24:864:0:0:0,-7.22472,-10 0/0:88.1573:26:26:962:0:0:0,-7.82678,-10 0/0:94.1739:28:28:1021:0:0:0,-8.42884,-10 0/0:30.963:7:7:234:0:0:0,-2.10721,-10 0/0:46.0145:12:12:435:0:0:0,-3.61236,-10 0/0:99:51:51:1886:0:0:0,-10,-10 0/0:99:43:42:1534:1:16:0,-9.71082,-10 0/0:88.1573:26:26:975:0:0:0,-7.82678,-10 0/0:97.1787:29:29:1068:0:0:0,-8.72987,-10 0/0:99:37:37:1325:0:0:0,-10,-10 1/1:37.9488:23:0:0:23:861:-10,-6.92369,0 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:55.0454:15:15:562:0:0:0,-4.51545,-10 0/0:99:48:48:1776:0:0:0,-10,-10 0/1:99:61:31:1104:30:1117:-10,0,-10 0/0:99:38:38:1357:0:0:0,-10,-10 scaffold_245 469340 . CAGA C 1310.13 . AB=0.684211;ABP=14.2105;AC=3;AF=0.0163043;AN=184;AO=54;CIGAR=1M3D1M;DP=2489;DPB=2456.6;DPRA=1.22575;EPP=3.17115;EPPR=3.52715;GTI=0;LEN=3;MEANALT=1;MQM=46.9259;MQMR=59.9744;NS=92;NUMALT=1;ODDS=4.06281;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1854;QR=88354;RO=2420;RPP=120.27;RPPR=5223.29;RUN=1;SAF=28;SAP=3.17115;SAR=26;SRF=1218;SRP=3.24001;SRR=1202;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:62.9357:19:19:704:0:0:0,-5.71957,-10 0|0:62.9357:19:19:670:0:0:0,-5.71957,-10 0|0:99:32:32:1165:0:0:0,-9.63296,-10 0|0:71.9666:22:22:794:0:0:0,-6.62266,-10 0|0:41.8636:12:12:444:0:0:0,-3.61236,-10 0|0:74.9769:23:23:854:0:0:0,-6.92369,-10 0|0:99:51:51:1860:0:0:0,-10,-10 0|0:93.0382:29:29:1052:0:0:0,-8.72987,-10 0|0:47.8842:14:14:490:0:0:0,-4.21442,-10 0|0:32.8327:9:9:333:0:0:0,-2.70927,-10 0|0:26.8121:7:7:262:0:0:0,-2.10721,-10 0|0:47.8842:14:14:513:0:0:0,-4.21442,-10 0|0:99:54:52:1909:0:0:0,-10,-10 0|0:99:33:32:1174:0:0:0,-9.63296,-10 0|0:99:35:35:1303:0:0:0,-10,-10 0|0:99:32:32:1198:0:0:0,-9.63296,-10 0|0:99:38:38:1421:0:0:0,-10,-10 0|0:35.843:10:10:375:0:0:0,-3.0103,-10 0|0:99:38:38:1415:0:0:0,-10,-10 0|0:99:64:62:2269:0:0:0,-10,-10 0|0:87.018:29:27:997:0:0:0,-8.12781,-10 0|0:99:46:46:1677:0:0:0,-10,-10 0|0:32.8327:9:9:329:0:0:0,-2.70927,-10 0|0:77.9872:24:24:885:0:0:0,-7.22472,-10 1|1:48.5295:28:0:0:28:939:-10,-8.42884,0 0|0:99:33:32:1170:0:0:0,-9.63296,-10 0|0:77.9872:25:24:900:0:0:0,-7.22472,-10 0|0:50.8945:15:15:543:0:0:0,-4.51545,-10 0|0:99:34:34:1209:0:0:0,-10,-10 0|0:99:44:44:1614:0:0:0,-10,-10 0|0:35.843:10:10:364:0:0:0,-3.0103,-10 0|0:17.7812:4:4:143:0:0:0,-1.20412,-10 0|0:71.9666:22:22:809:0:0:0,-6.62266,-10 0|0:59.9254:18:18:640:0:0:0,-5.41854,-10 0|0:99:34:34:1270:0:0:0,-10,-10 0|0:29.8224:8:8:294:0:0:0,-2.40824,-10 0|0:68.9563:21:21:753:0:0:0,-6.32163,-10 0|0:99:49:48:1749:0:0:0,-10,-10 0|0:87.018:27:27:970:0:0:0,-8.12781,-10 0|0:68.9563:21:21:786:0:0:0,-6.32163,-10 0|0:99:48:48:1767:0:0:0,-10,-10 0|0:74.9769:23:23:804:0:0:0,-6.92369,-10 0|0:96.048:31:30:1100:0:0:0,-9.0309,-10 0|0:99:49:49:1808:0:0:0,-10,-10 0|0:99:36:36:1314:0:0:0,-10,-10 0|0:71.9666:22:22:798:0:0:0,-6.62266,-10 0|0:99:68:68:2514:0:0:0,-10,-10 0|0:99:38:38:1363:0:0:0,-10,-10 0|0:47.8842:14:14:524:0:0:0,-4.21442,-10 0|1:99:38:12:445:26:915:-10,0,-10 0|0:77.9872:24:24:869:0:0:0,-7.22472,-10 0|0:99:35:35:1283:0:0:0,-10,-10 0|0:38.8533:11:11:407:0:0:0,-3.31133,-10 0|0:38.8533:11:11:408:0:0:0,-3.31133,-10 0|0:99:43:42:1497:0:0:0,-10,-10 0|0:59.9254:18:18:638:0:0:0,-5.41854,-10 0|0:99:36:36:1313:0:0:0,-10,-10 0|0:44.8739:13:13:490:0:0:0,-3.91339,-10 0|0:56.9151:17:17:635:0:0:0,-5.11751,-10 0|0:56.9151:17:17:616:0:0:0,-5.11751,-10 0|0:99:43:43:1544:0:0:0,-10,-10 0|0:71.9666:22:22:817:0:0:0,-6.62266,-10 0|0:99:52:51:1895:0:0:0,-10,-10 0|0:99:34:34:1257:0:0:0,-10,-10 0|0:44.8739:13:13:479:0:0:0,-3.91339,-10 0|0:99:33:33:1199:0:0:0,-9.93399,-10 0|0:65.946:20:20:716:0:0:0,-6.0206,-10 0|0:41.8636:12:12:447:0:0:0,-3.61236,-10 0|0:99:51:51:1854:0:0:0,-10,-10 0|0:59.9254:18:18:680:0:0:0,-5.41854,-10 0|0:68.9563:21:21:755:0:0:0,-6.32163,-10 0|0:99:42:42:1468:0:0:0,-10,-10 0|0:80.9975:25:25:903:0:0:0,-7.52575,-10 0|0:59.9254:19:18:665:0:0:0,-5.41854,-10 0|0:99:39:39:1454:0:0:0,-10,-10 0|0:59.9254:18:18:618:0:0:0,-5.41854,-10 0|0:53.9048:16:16:574:0:0:0,-4.81648,-10 0|0:44.8739:13:13:463:0:0:0,-3.91339,-10 0|0:20.7915:5:5:182:0:0:0,-1.50515,-10 0|0:38.8533:11:11:415:0:0:0,-3.31133,-10 0|0:99:45:45:1604:0:0:0,-10,-10 0|0:99:39:39:1434:0:0:0,-10,-10 0|0:99:39:39:1420:0:0:0,-10,-10 0|0:99:33:33:1209:0:0:0,-9.93399,-10 0|0:96.048:30:30:1070:0:0:0,-9.0309,-10 0|0:32.8327:9:9:323:0:0:0,-2.70927,-10 0|0:87.018:27:27:983:0:0:0,-8.12781,-10 0|0:84.0078:27:26:926:0:0:0,-7.82678,-10 0|0:41.8636:12:12:419:0:0:0,-3.61236,-10 0|0:71.9666:22:22:813:0:0:0,-6.62266,-10 0|0:99:31:31:1126:0:0:0,-9.33193,-10 0|0:65.946:20:20:742:0:0:0,-6.0206,-10 scaffold_245 473583 . T A 370.311 . AB=0.555556;ABP=3.73412;AC=1;AF=0.00543478;AN=184;AO=15;CIGAR=1X;DP=2416;DPB=2416;DPRA=1.02846;EPP=10.1038;EPPR=4.3168;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9933;NS=92;NUMALT=1;ODDS=11.4342;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=557;QR=87343;RO=2400;RPP=35.5824;RPPR=5205.86;RUN=1;SAF=4;SAP=10.1038;SAR=11;SRF=1182;SRP=4.1829;SRR=1218;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:82.7716:15:15:565:0:0:0,-4.51545,-10 0/0:76.751:13:13:489:0:0:0,-3.91339,-10 0/0:99:24:24:843:0:0:0,-7.22472,-10 0/0:88.7914:17:17:642:0:0:0,-5.11751,-10 0/0:73.7407:12:12:456:0:0:0,-3.61236,-10 0/0:61.6995:8:8:304:0:0:0,-2.40824,-10 0/0:99:53:53:1897:0:0:0,-10,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:76.751:13:13:494:0:0:0,-3.91339,-10 0/0:52.6686:5:5:185:0:0:0,-1.50515,-10 0/0:55.6789:6:6:217:0:0:0,-1.80618,-10 0/0:58.6892:7:7:257:0:0:0,-2.10721,-10 0/0:99:42:42:1510:0:0:0,-10,-10 0/0:99:49:49:1753:0:0:0,-10,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:99:24:24:898:0:0:0,-7.22472,-10 0/0:76.751:13:13:491:0:0:0,-3.91339,-10 0/0:99:30:30:1123:0:0:0,-9.0309,-10 0/0:99:52:52:1873:0:0:0,-10,-10 0/0:99:25:25:862:0:0:0,-7.52575,-10 0/0:99:41:41:1508:0:0:0,-10,-10 0/0:64.7098:9:9:328:0:0:0,-2.70927,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:99:40:40:1497:0:0:0,-10,-10 0/0:99:24:24:866:0:0:0,-7.22472,-10 0/0:99:23:23:841:0:0:0,-6.92369,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:99:59:59:2148:0:0:0,-10,-10 0/0:55.6789:6:6:227:0:0:0,-1.80618,-10 0/0:49.6583:4:4:144:0:0:0,-1.20412,-10 0/0:99:21:21:702:0:0:0,-6.32163,-10 0/0:82.7716:15:15:556:0:0:0,-4.51545,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:58.6892:7:7:265:0:0:0,-2.10721,-10 0/0:85.7818:16:16:597:0:0:0,-4.81648,-10 0/0:99:53:53:1916:0:0:0,-10,-10 0/0:99:28:28:1009:0:0:0,-8.42884,-10 0/0:88.7914:17:17:624:0:0:0,-5.11751,-10 0/0:99:41:41:1479:0:0:0,-10,-10 0/0:99:31:31:1092:0:0:0,-9.33193,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/0:99:42:42:1521:0:0:0,-10,-10 0/0:99:39:39:1404:0:0:0,-10,-10 0/0:99:23:23:873:0:0:0,-6.92369,-10 0/0:99:63:63:2320:0:0:0,-10,-10 0/0:99:24:24:849:0:0:0,-7.22472,-10 0/0:99:24:24:899:0:0:0,-7.22472,-10 0/0:99:56:56:2095:0:0:0,-10,-10 0/0:79.7613:14:14:519:0:0:0,-4.21442,-10 0/0:99:48:48:1765:0:0:0,-10,-10 0/0:88.7914:17:17:597:0:0:0,-5.11751,-10 0/0:67.7201:10:10:350:0:0:0,-3.0103,-10 0/0:99:57:57:2086:0:0:0,-10,-10 0/0:91.8009:18:18:652:0:0:0,-5.41854,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:76.751:13:13:413:0:0:0,-3.91339,-10 0/0:99:28:28:1001:0:0:0,-8.42884,-10 0/0:76.751:13:13:489:0:0:0,-3.91339,-10 0/0:99:35:35:1276:0:0:0,-10,-10 0/0:99:23:23:832:0:0:0,-6.92369,-10 0/0:99:46:46:1672:0:0:0,-10,-10 0/0:99:24:24:883:0:0:0,-7.22472,-10 0/0:82.7716:15:15:541:0:0:0,-4.51545,-10 0/1:99:27:12:439:15:557:-10,0,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:70.7304:11:11:416:0:0:0,-3.31133,-10 0/0:99:49:49:1788:0:0:0,-10,-10 0/0:79.7613:14:14:531:0:0:0,-4.21442,-10 0/0:99:28:27:929:0:0:0,-8.12781,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:99:53:53:1878:0:0:0,-10,-10 0/0:99:22:22:795:0:0:0,-6.62266,-10 0/0:99:40:40:1456:0:0:0,-10,-10 0/0:79.7613:14:14:480:0:0:0,-4.21442,-10 0/0:91.8009:18:18:658:0:0:0,-5.41854,-10 0/0:88.7914:17:17:624:0:0:0,-5.11751,-10 0/0:58.6892:7:7:237:0:0:0,-2.10721,-10 0/0:79.7613:14:14:491:0:0:0,-4.21442,-10 0/0:99:43:43:1610:0:0:0,-10,-10 0/0:99:48:48:1792:0:0:0,-10,-10 0/0:99:26:26:925:0:0:0,-7.82678,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 0/0:99:29:29:1055:0:0:0,-8.72987,-10 0/0:70.7304:11:11:394:0:0:0,-3.31133,-10 0/0:99:21:21:750:0:0:0,-6.32163,-10 0/0:99:21:21:718:0:0:0,-6.32163,-10 0/0:61.6995:8:8:294:0:0:0,-2.40824,-10 0/0:91.8009:18:18:667:0:0:0,-5.41854,-10 0/0:99:22:22:791:0:0:0,-6.62266,-10 0/0:99:24:24:866:0:0:0,-7.22472,-10 scaffold_245 473605 . C T 2364.63 . AB=0.533898;ABP=4.18805;AC=5;AF=0.0271739;AN=184;AO=87;CIGAR=1X;DP=2415;DPB=2415;DPRA=1.46539;EPP=3.03526;EPPR=4.98572;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9931;NS=92;NUMALT=1;ODDS=4.09905;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3219;QR=83857;RO=2326;RPP=191.928;RPPR=5045.17;RUN=1;SAF=43;SAP=3.03526;SAR=44;SRF=1141;SRP=4.81768;SRR=1185;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:51.1001:15:15:538:0:0:0,-4.51545,-10 0/0:45.0795:13:13:490:0:0:0,-3.91339,-10 0/0:78.1928:24:24:836:0:0:0,-7.22472,-10 0/0:57.1207:17:17:637:0:0:0,-5.11751,-10 0/0:42.0692:12:12:422:0:0:0,-3.61236,-10 0/0:30.028:8:8:290:0:0:0,-2.40824,-10 0/0:99:53:52:1823:1:29:0,-10,-10 0/0:84.2134:26:26:977:0:0:0,-7.82678,-10 0/0:45.0795:13:13:485:0:0:0,-3.91339,-10 0/0:20.9971:5:5:190:0:0:0,-1.50515,-10 0/0:24.0074:6:6:224:0:0:0,-1.80618,-10 0/0:27.0177:7:7:264:0:0:0,-2.10721,-10 0/0:99:42:42:1514:0:0:0,-10,-10 0/0:99:49:49:1728:0:0:0,-10,-10 0/0:96.2543:30:30:1103:0:0:0,-9.0309,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:78.1928:24:24:875:0:0:0,-7.22472,-10 0/0:45.0795:13:13:485:0:0:0,-3.91339,-10 0/0:96.2543:30:30:1085:0:0:0,-9.0309,-10 0/0:99:52:52:1778:0:0:0,-10,-10 0/0:81.2031:25:25:863:0:0:0,-7.52575,-10 0/0:99:41:41:1503:0:0:0,-10,-10 0/0:33.0383:9:9:327:0:0:0,-2.70927,-10 0/0:99:33:33:1154:0:0:0,-9.93399,-10 0/0:96.2543:30:30:1096:0:0:0,-9.0309,-10 0/0:99:40:40:1449:0:0:0,-10,-10 0/0:78.1928:24:24:884:0:0:0,-7.22472,-10 0/0:75.1825:23:23:831:0:0:0,-6.92369,-10 0/0:67.9491:31:30:1063:1:20:0,-5.84057,-10 0/0:99:59:58:2046:0:0:0,-10,-10 0/0:24.0074:6:6:226:0:0:0,-1.80618,-10 0/0:17.9868:4:4:152:0:0:0,-1.20412,-10 0/0:69.1619:21:21:740:0:0:0,-6.32163,-10 0/0:51.1001:15:15:547:0:0:0,-4.51545,-10 0/0:72.1722:22:22:756:0:0:0,-6.62266,-10 0/0:27.0177:7:7:259:0:0:0,-2.10721,-10 0/0:54.1104:16:16:541:0:0:0,-4.81648,-10 0/0:99:53:53:1954:0:0:0,-10,-10 0/0:90.2329:28:28:1032:0:0:0,-8.42884,-10 0/0:54.1104:17:16:555:0:0:0,-4.81648,-10 0/1:99:41:20:729:21:772:-10,0,-10 0/0:99:31:31:1105:0:0:0,-9.33193,-10 0/0:87.2236:27:27:974:0:0:0,-8.12781,-10 0/0:99:42:42:1528:0:0:0,-10,-10 0/0:99:39:39:1398:0:0:0,-10,-10 0/0:75.1825:23:23:834:0:0:0,-6.92369,-10 0/0:99:63:63:2270:0:0:0,-10,-10 0/0:78.1928:24:24:859:0:0:0,-7.22472,-10 0/0:78.1928:24:24:908:0:0:0,-7.22472,-10 0/0:99:56:56:2090:0:0:0,-10,-10 0/0:48.0898:14:14:529:0:0:0,-4.21442,-10 0/0:99:48:48:1729:0:0:0,-10,-10 0/0:57.1207:17:17:624:0:0:0,-5.11751,-10 0/0:36.0486:10:10:337:0:0:0,-3.0103,-10 0/0:99:57:57:2046:0:0:0,-10,-10 0/0:60.131:18:18:636:0:0:0,-5.41854,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:45.0795:13:13:437:0:0:0,-3.91339,-10 0/0:90.2329:28:28:1024:0:0:0,-8.42884,-10 0/0:45.0795:13:13:448:0:0:0,-3.91339,-10 0/0:99:35:35:1300:0:0:0,-10,-10 0/0:75.1825:23:23:753:0:0:0,-6.92369,-10 0/0:99:46:46:1675:0:0:0,-10,-10 0/0:78.1928:24:24:872:0:0:0,-7.22472,-10 0/0:51.1001:15:15:546:0:0:0,-4.51545,-10 0/0:87.2236:27:27:992:0:0:0,-8.12781,-10 0/0:75.1825:23:23:856:0:0:0,-6.92369,-10 0/0:39.0589:11:11:405:0:0:0,-3.31133,-10 0/0:99:49:49:1795:0:0:0,-10,-10 0/0:48.0898:14:14:503:0:0:0,-4.21442,-10 0/0:90.2329:28:28:1041:0:0:0,-8.42884,-10 0/1:99:37:16:555:21:784:-10,0,-10 0/0:99:53:53:1918:0:0:0,-10,-10 1/1:32.1769:22:0:0:22:825:-10,-6.62266,0 0/1:99:40:19:706:21:789:-10,0,-10 0/0:48.0898:14:14:450:0:0:0,-4.21442,-10 0/0:60.131:18:18:645:0:0:0,-5.41854,-10 0/0:57.1207:17:17:585:0:0:0,-5.11751,-10 0/0:27.0177:7:7:237:0:0:0,-2.10721,-10 0/0:48.0898:14:14:487:0:0:0,-4.21442,-10 0/0:99:43:43:1566:0:0:0,-10,-10 0/0:99:48:48:1763:0:0:0,-10,-10 0/0:84.2134:26:26:922:0:0:0,-7.82678,-10 0/0:87.2236:27:27:937:0:0:0,-8.12781,-10 0/0:90.2329:28:28:984:0:0:0,-8.42884,-10 0/0:39.0589:11:11:416:0:0:0,-3.31133,-10 0/0:69.1619:21:21:785:0:0:0,-6.32163,-10 0/0:69.1619:21:21:756:0:0:0,-6.32163,-10 0/0:30.028:8:8:294:0:0:0,-2.40824,-10 0/0:60.131:18:18:630:0:0:0,-5.41854,-10 0/0:72.1722:22:22:789:0:0:0,-6.62266,-10 0/0:78.1928:24:24:881:0:0:0,-7.22472,-10 scaffold_245 540000 . T C 3333.45 . AB=0.518987;ABP=3.50507;AC=9;AF=0.048913;AN=184;AO=126;CIGAR=1X;DP=2385;DPB=2385;DPRA=1.04564;EPP=4.11327;EPPR=3.01415;GTI=2;LEN=1;MEANALT=1.125;MQM=48.1508;MQMR=52.992;NS=92;NUMALT=1;ODDS=1.49509;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4568;QR=81975;RO=2254;RPP=276.616;RPPR=4615.07;RUN=1;SAF=67;SAP=4.11327;SAR=59;SRF=1161;SRP=7.465;SRR=1093;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:79.1745:22:22:720:0:0:0,-6.62266,-10 0/0:37.0304:8:8:302:0:0:0,-2.40824,-10 0/0:97.2332:28:28:986:0:0:0,-8.42884,-10 0/0:55.0922:14:14:519:0:0:0,-4.21442,-10 0/0:0.757104:14:13:450:1:38:-0.731708,0,-10 0/0:40.0407:9:9:333:0:0:0,-2.70927,-10 0/0:99:62:62:2208:0:0:0,-10,-10 0/1:99:31:14:515:16:572:-10,0,-10 0/0:55.0922:14:14:522:0:0:0,-4.21442,-10 0/0:24.9892:4:4:139:0:0:0,-1.20412,-10 0/0:21.9789:3:3:114:0:0:0,-0.90309,-10 0/0:49.0716:12:12:444:0:0:0,-3.61236,-10 0/0:99:44:44:1624:0:0:0,-10,-10 0/0:99:44:44:1631:0:0:0,-10,-10 0/0:85.195:24:24:910:0:0:0,-7.22472,-10 0/0:70.1436:19:19:683:0:0:0,-5.71957,-10 0/1:99:24:11:396:13:478:-10,0,-10 0/0:34.0201:7:7:252:0:0:0,-2.10721,-10 0/0:99:35:35:1317:0:0:0,-10,-10 0/0:99:44:44:1586:0:0:0,-10,-10 0/0:82.1848:23:23:838:0:0:0,-6.92369,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:46.0613:11:11:359:0:0:0,-3.31133,-10 0/0:99:32:32:1131:0:0:0,-9.63296,-10 0/0:82.1848:24:23:829:0:0:0,-6.92369,-10 0/0:99:31:31:1101:0:0:0,-9.33193,-10 0/0:82.1848:23:23:840:0:0:0,-6.92369,-10 1/1:18.2452:15:0:0:15:566:-10,-4.51545,0 0/0:91.215:26:26:963:0:0:0,-7.82678,-10 0/0:99:49:49:1819:0:0:0,-10,-10 0/0:37.0304:8:8:279:0:0:0,-2.40824,-10 0/0:27.9995:5:5:186:0:0:0,-1.50515,-10 1/1:10.5334:29:1:38:28:1004:-10,-3.46747,0 0/0:55.0922:14:14:519:0:0:0,-4.21442,-10 0/0:99:35:35:1321:0:0:0,-10,-10 0/0:52.0819:13:13:472:0:0:0,-3.91339,-10 0/0:52.0819:13:13:414:0:0:0,-3.91339,-10 0/0:99:38:38:1368:0:0:0,-10,-10 0/0:99:32:32:1098:0:0:0,-9.63296,-10 0/0:79.1745:22:22:800:0:0:0,-6.62266,-10 0/0:99:33:33:1206:0:0:0,-9.93399,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:94.2245:27:27:1014:0:0:0,-8.12781,-10 0/0:99:39:39:1373:0:0:0,-10,-10 0/0:99:30:30:1134:0:0:0,-9.0309,-10 0/0:67.1333:18:18:660:0:0:0,-5.41854,-10 0/0:99:67:67:2408:0:0:0,-10,-10 0/0:99:36:36:1322:0:0:0,-10,-10 0/0:61.1128:16:16:585:0:0:0,-4.81648,-10 0/1:99:49:26:922:23:829:-10,0,-10 0/0:52.0819:13:13:470:0:0:0,-3.91339,-10 0/1:99:47:24:869:23:816:-10,0,-10 0/0:55.0922:14:14:473:0:0:0,-4.21442,-10 0/0:55.0922:14:14:514:0:0:0,-4.21442,-10 0/0:99:54:53:1939:0:0:0,-10,-10 0/0:67.1333:18:18:657:0:0:0,-5.41854,-10 0/0:94.2245:27:27:1004:0:0:0,-8.12781,-10 0/0:40.0407:9:9:341:0:0:0,-2.70927,-10 0/0:67.1333:18:18:675:0:0:0,-5.41854,-10 0/0:27.9995:5:5:186:0:0:0,-1.50515,-10 0/0:99:44:44:1600:0:0:0,-10,-10 0/0:94.2245:27:27:975:0:0:0,-8.12781,-10 0/0:99:62:62:2317:0:0:0,-10,-10 0/0:97.2332:28:28:1012:0:0:0,-8.42884,-10 0/0:61.1128:16:16:575:0:0:0,-4.81648,-10 0/0:99:34:34:1218:0:0:0,-10,-10 0/0:99:34:33:1198:0:0:0,-9.93399,-10 0/1:0.0114936:7:0:0:7:265:-10,-2.10721,0 0/0:99:43:43:1549:0:0:0,-10,-10 0/0:61.1128:16:16:551:0:0:0,-4.81648,-10 0/0:94.2245:27:27:964:0:0:0,-8.12781,-10 0/0:99:50:50:1851:0:0:0,-10,-10 0/0:99:50:50:1766:0:0:0,-10,-10 0/0:79.1745:22:22:778:0:0:0,-6.62266,-10 0/0:99:41:41:1514:0:0:0,-10,-10 0/0:76.1642:21:21:776:0:0:0,-6.32163,-10 0/0:61.1128:16:16:546:0:0:0,-4.81648,-10 0/0:58.1025:15:15:570:0:0:0,-4.51545,-10 0/0:37.0304:9:8:288:0:0:0,-2.40824,-10 0/0:55.0922:14:14:514:0:0:0,-4.21442,-10 0/0:99:38:38:1371:0:0:0,-10,-10 0/0:99:44:44:1647:0:0:0,-10,-10 0/0:99:42:42:1562:0:0:0,-10,-10 0/0:88.2051:25:25:906:0:0:0,-7.52575,-10 0/0:99:40:40:1493:0:0:0,-10,-10 0/0:21.9789:3:3:110:0:0:0,-0.90309,-10 0/0:61.1128:16:16:594:0:0:0,-4.81648,-10 0/0:79.1745:22:22:801:0:0:0,-6.62266,-10 0/0:37.0304:8:8:298:0:0:0,-2.40824,-10 0/0:76.1642:21:21:762:0:0:0,-6.32163,-10 0/0:73.1539:20:20:733:0:0:0,-6.0206,-10 0/0:91.215:26:26:963:0:0:0,-7.82678,-10 scaffold_245 690751 . A AGCTCCCC 143.145 . AB=0.6;ABP=4.31318;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1M7I1M;DP=1935;DPB=1966.5;DPRA=0.710938;EPP=5.18177;EPPR=3.96095;GTI=0;LEN=7;MEANALT=1;MQM=60;MQMR=59.9828;NS=92;NUMALT=1;ODDS=12.2753;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=270;QR=70062;RO=1921;RPP=22.5536;RPPR=4174.41;RUN=1;SAF=3;SAP=5.18177;SAR=6;SRF=975;SRP=3.96095;SRR=946;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:99:19:19:686:0:0:0,-5.71957,-10 0|0:80.4036:12:12:428:0:0:0,-3.61236,-10 0|0:89.434:15:15:552:0:0:0,-4.51545,-10 0|0:80.4036:12:12:433:0:0:0,-3.61236,-10 0|0:71.3727:9:9:311:0:0:0,-2.70927,-10 0|0:68.3624:8:8:287:0:0:0,-2.40824,-10 0|0:99:36:36:1322:0:0:0,-10,-10 0|0:99:31:31:1120:0:0:0,-9.33193,-10 0|0:89.434:15:15:546:0:0:0,-4.51545,-10 0|0:59.3315:5:5:180:0:0:0,-1.50515,-10 0|0:74.383:10:10:378:0:0:0,-3.0103,-10 0|0:77.3933:11:11:382:0:0:0,-3.31133,-10 0|0:99:45:45:1575:0:0:0,-10,-10 0|0:99:37:37:1401:0:0:0,-10,-10 0|0:99:39:39:1448:0:0:0,-10,-10 0|0:99:30:30:1126:0:0:0,-9.0309,-10 0|0:99:30:30:1078:0:0:0,-9.0309,-10 0|0:68.3624:8:8:303:0:0:0,-2.40824,-10 0|0:99:20:20:716:0:0:0,-6.0206,-10 0|0:99:40:39:1363:0:0:0,-10,-10 0|1:99:15:6:221:9:270:-10,0,-10 0|0:99:36:36:1314:0:0:0,-10,-10 0|0:98.4613:18:18:662:0:0:0,-5.41854,-10 0|0:99:25:25:877:0:0:0,-7.52575,-10 0|0:99:20:20:691:0:0:0,-6.0206,-10 0|0:99:30:30:1067:0:0:0,-9.0309,-10 0|0:99:20:20:696:0:0:0,-6.0206,-10 0|0:92.4438:16:16:589:0:0:0,-4.81648,-10 0|0:89.434:15:15:565:0:0:0,-4.51545,-10 0|0:99:27:27:996:0:0:0,-8.12781,-10 0|0:80.4036:12:12:453:0:0:0,-3.61236,-10 0|0:71.3727:9:9:336:0:0:0,-2.70927,-10 0|0:92.4438:16:16:580:0:0:0,-4.81648,-10 0|0:74.383:10:10:356:0:0:0,-3.0103,-10 0|0:99:23:23:830:0:0:0,-6.92369,-10 0|0:68.3624:8:8:303:0:0:0,-2.40824,-10 0|0:92.4438:16:16:588:0:0:0,-4.81648,-10 0|0:99:30:30:1118:0:0:0,-9.0309,-10 0|0:71.3727:9:9:338:0:0:0,-2.70927,-10 0|0:74.383:10:10:378:0:0:0,-3.0103,-10 0|0:99:37:37:1340:0:0:0,-10,-10 0|0:71.3727:9:9:318:0:0:0,-2.70927,-10 0|0:77.3933:11:11:417:0:0:0,-3.31133,-10 0|0:99:36:35:1286:0:0:0,-10,-10 0|0:99:25:25:920:0:0:0,-7.52575,-10 0|0:80.4036:12:12:436:0:0:0,-3.61236,-10 0|0:99:46:46:1676:0:0:0,-10,-10 0|0:99:23:23:850:0:0:0,-6.92369,-10 0|0:95.4531:17:17:640:0:0:0,-5.11751,-10 0|0:99:31:31:1123:0:0:0,-9.33193,-10 0|0:89.434:15:15:560:0:0:0,-4.51545,-10 0|0:99:29:29:1026:0:0:0,-8.72987,-10 0|0:98.4613:18:18:628:0:0:0,-5.41854,-10 0|0:68.3624:8:8:297:0:0:0,-2.40824,-10 0|0:99:39:39:1402:0:0:0,-10,-10 0|0:74.383:10:10:378:0:0:0,-3.0103,-10 0|0:99:25:25:923:0:0:0,-7.52575,-10 0|0:95.4531:17:17:642:0:0:0,-5.11751,-10 0|0:80.4036:12:12:430:0:0:0,-3.61236,-10 0|0:83.4138:13:13:486:0:0:0,-3.91339,-10 0|0:99:31:30:1119:0:0:0,-9.0309,-10 0|0:99:25:25:913:0:0:0,-7.52575,-10 0|0:99:37:37:1364:0:0:0,-10,-10 0|0:89.434:15:15:541:0:0:0,-4.51545,-10 0|0:65.3521:7:7:257:0:0:0,-2.10721,-10 0|0:99:33:33:1180:0:0:0,-9.93399,-10 0|0:99:28:28:1053:0:0:0,-8.42884,-10 0|0:65.3521:7:7:262:0:0:0,-2.10721,-10 0|0:99:48:48:1762:0:0:0,-10,-10 0|0:83.4138:13:13:443:0:0:0,-3.91339,-10 0|0:77.3933:11:11:394:0:0:0,-3.31133,-10 0|0:99:35:35:1291:0:0:0,-10,-10 0|0:99:23:23:837:0:0:0,-6.92369,-10 0|0:80.4036:12:12:406:0:0:0,-3.61236,-10 0|0:99:29:29:1072:0:0:0,-8.72987,-10 0|0:95.4531:17:17:621:0:0:0,-5.11751,-10 0|0:99:23:23:843:0:0:0,-6.92369,-10 0|0:77.3933:11:11:401:0:0:0,-3.31133,-10 0|0:53.3109:3:3:114:0:0:0,-0.90309,-10 0|0:83.4138:13:13:491:0:0:0,-3.91339,-10 0|0:99:40:40:1479:0:0:0,-10,-10 0|0:99:39:39:1464:0:0:0,-10,-10 0|0:99:34:34:1236:0:0:0,-10,-10 0|0:99:30:30:1073:0:0:0,-9.0309,-10 0|0:99:28:27:998:0:0:0,-8.12781,-10 0|0:56.3212:4:4:145:0:0:0,-1.20412,-10 0|0:98.4613:18:18:651:0:0:0,-5.41854,-10 0|0:86.424:14:14:516:0:0:0,-4.21442,-10 0|0:83.4138:13:13:467:0:0:0,-3.91339,-10 0|0:99:22:21:780:0:0:0,-6.32163,-10 0|0:92.4438:16:16:574:0:0:0,-4.81648,-10 0|0:99:26:26:944:0:0:0,-7.82678,-10 scaffold_245 723192 . C T 1046.43 . AB=0.732143;ABP=29.2231;AC=2;AF=0.0108696;AN=184;AO=41;CIGAR=1X;DP=2439;DPB=2439;DPRA=1.05749;EPP=11.961;EPPR=6.05652;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9917;NS=92;NUMALT=1;ODDS=0.245301;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1511;QR=87247;RO=2398;RPP=92.0407;RPPR=5210.2;RUN=1;SAF=14;SAP=11.961;SAR=27;SRF=1170;SRP=6.05652;SRR=1228;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:2.46216:19:0:0:19:680:-10,-5.71957,0 0/0:55.5819:15:15:516:0:0:0,-4.51545,-10 0/0:82.6745:24:24:866:0:0:0,-7.22472,-10 0/0:64.6128:18:18:636:0:0:0,-5.41854,-10 0/0:61.6025:17:17:612:0:0:0,-5.11751,-10 0/0:67.6231:19:19:673:0:0:0,-5.71957,-10 0/0:99:51:51:1812:0:0:0,-10,-10 0/0:99:35:35:1261:0:0:0,-10,-10 0/0:76.654:22:22:782:0:0:0,-6.62266,-10 0/0:19.4583:3:3:106:0:0:0,-0.90309,-9.89333 0/0:43.5407:11:11:393:0:0:0,-3.31133,-10 0/0:46.551:12:12:449:0:0:0,-3.61236,-10 0/0:99:51:51:1863:0:0:0,-10,-10 0/0:99:54:54:1940:0:0:0,-10,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:99:38:38:1332:0:0:0,-10,-10 0/0:99:35:35:1282:0:0:0,-10,-10 0/0:64.6128:18:18:664:0:0:0,-5.41854,-10 0/0:99:45:45:1656:0:0:0,-10,-10 0/0:99:53:53:1911:0:0:0,-10,-10 0/0:88.6946:26:26:974:0:0:0,-7.82678,-10 0/0:99:38:38:1414:0:0:0,-10,-10 0/0:43.5407:11:11:401:0:0:0,-3.31133,-10 0/0:91.7058:27:27:915:0:0:0,-8.12781,-10 0/0:88.6946:26:26:967:0:0:0,-7.82678,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:97.7212:29:29:998:0:0:0,-8.72987,-10 0/0:61.6025:17:17:584:0:0:0,-5.11751,-10 0/0:94.7163:28:28:1037:0:0:0,-8.42884,-10 0/0:99:41:41:1506:0:0:0,-10,-10 0/0:43.5407:11:11:416:0:0:0,-3.31133,-10 0/0:43.5407:11:11:383:0:0:0,-3.31133,-10 0/0:61.6025:17:17:638:0:0:0,-5.11751,-10 0/0:40.5304:10:10:362:0:0:0,-3.0103,-10 0/0:73.6437:21:21:760:0:0:0,-6.32163,-10 0/0:55.5819:15:15:502:0:0:0,-4.51545,-10 0/0:49.5613:13:13:487:0:0:0,-3.91339,-10 0/0:99:40:40:1474:0:0:0,-10,-10 0/0:79.6643:23:23:844:0:0:0,-6.92369,-10 0/0:67.6231:19:19:692:0:0:0,-5.71957,-10 0/0:99:51:51:1863:0:0:0,-10,-10 0/0:94.7163:28:28:1023:0:0:0,-8.42884,-10 0/0:85.6846:25:25:844:0:0:0,-7.52575,-10 0/0:99:40:40:1462:0:0:0,-10,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/0:52.5716:14:14:529:0:0:0,-4.21442,-10 0/0:99:59:59:2131:0:0:0,-10,-10 0/0:99:33:33:1236:0:0:0,-9.93399,-10 0/0:67.6231:19:19:688:0:0:0,-5.71957,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:67.6231:19:19:696:0:0:0,-5.71957,-10 0/0:99:52:52:1926:0:0:0,-10,-10 0/0:91.7058:27:27:1019:0:0:0,-8.12781,-10 0/0:28.4892:6:6:223:0:0:0,-1.80618,-10 0/0:99:46:46:1697:0:0:0,-10,-10 0/0:55.5819:15:15:541:0:0:0,-4.51545,-10 0/0:61.6025:17:17:631:0:0:0,-5.11751,-10 0/0:70.6334:20:20:706:0:0:0,-6.0206,-10 0/0:61.6025:17:17:629:0:0:0,-5.11751,-10 0/0:61.6025:17:17:623:0:0:0,-5.11751,-10 0/0:99:45:45:1638:0:0:0,-10,-10 0/0:67.6231:19:19:690:0:0:0,-5.71957,-10 0/0:99:47:47:1678:0:0:0,-10,-10 0/0:99:30:30:1124:0:0:0,-9.0309,-10 0/0:52.5716:14:14:516:0:0:0,-4.21442,-10 0/0:99:55:55:2010:0:0:0,-10,-10 0/0:70.6334:20:20:743:0:0:0,-6.0206,-10 0/0:37.5201:9:9:340:0:0:0,-2.70927,-10 0/0:99:51:51:1876:0:0:0,-10,-10 0/0:43.5407:11:11:409:0:0:0,-3.31133,-10 0/0:76.654:22:22:801:0:0:0,-6.62266,-10 0/0:99:31:31:1121:0:0:0,-9.33193,-10 0/0:85.6846:25:25:882:0:0:0,-7.52575,-10 0/0:67.6231:19:19:708:0:0:0,-5.71957,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:70.6334:20:20:741:0:0:0,-6.0206,-10 0/0:94.7163:28:28:956:0:0:0,-8.42884,-10 0/0:79.6643:23:23:860:0:0:0,-6.92369,-10 0/0:31.4995:7:7:266:0:0:0,-2.10721,-10 0/0:55.5819:15:15:565:0:0:0,-4.51545,-10 0/0:99:52:52:1892:0:0:0,-10,-10 0/1:99:37:15:548:22:831:-10,0,-10 0/0:85.6846:25:25:917:0:0:0,-7.52575,-10 0/0:97.7212:29:29:1075:0:0:0,-8.72987,-10 0/0:97.7212:29:29:1047:0:0:0,-8.72987,-10 0/0:37.5201:9:9:340:0:0:0,-2.70927,-10 0/0:82.6745:24:24:878:0:0:0,-7.22472,-10 0/0:64.6128:18:18:674:0:0:0,-5.41854,-10 0/0:43.5407:11:11:418:0:0:0,-3.31133,-10 0/0:79.6643:23:23:799:0:0:0,-6.92369,-10 0/0:99:42:42:1560:0:0:0,-10,-10 0/0:76.654:22:22:820:0:0:0,-6.62266,-10 scaffold_245 750311 . A G 53722.1 . AB=0.440217;ABP=8.72222;AC=168;AF=0.913043;AN=184;AO=1797;CIGAR=1X;DP=2001;DPB=2001;DPRA=1.09253;EPP=3.35952;EPPR=3.10657;GTI=0;LEN=1;MEANALT=1.01149;MQM=44.4374;MQMR=59.2315;NS=92;NUMALT=1;ODDS=1.8524;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=65971;QR=7439;RO=203;RPP=3905.15;RPPR=443.819;RUN=1;SAF=907;SAP=3.35952;SAR=890;SRF=103;SRP=3.10657;SRR=100;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:36.6769:14:0:0:14:470:-10,-4.21442,0 1/1:57.749:21:0:0:21:724:-10,-6.32163,0 1/1:66.7799:24:0:0:24:902:-10,-7.22472,0 1/1:30.6563:12:0:0:12:433:-10,-3.61236,0 1/1:42.6975:16:0:0:16:593:-10,-4.81648,0 1/1:18.6151:8:0:0:8:299:-10,-2.40824,0 1/1:99:44:0:0:44:1658:-10,-10,0 1/1:72.8005:26:0:0:26:926:-10,-7.82678,0 1/1:42.6975:16:0:0:16:553:-10,-4.81648,0 1/1:9.5842:5:0:0:5:164:-10,-1.50515,0 1/1:30.6563:12:0:0:12:454:-10,-3.61236,0 1/1:24.6357:10:0:0:10:351:-10,-3.0103,0 0/1:99:39:15:543:24:905:-10,0,-10 1/1:96.8826:34:0:0:34:1272:-10,-10,0 1/1:51.7284:19:0:0:19:714:-10,-5.71957,0 1/1:96.8826:34:0:0:34:1246:-10,-10,0 0/1:99:30:17:615:13:467:-10,0,-10 1/1:21.6254:9:0:0:9:341:-10,-2.70927,0 1/1:51.7284:19:0:0:19:672:-10,-5.71957,0 1/1:99:41:0:0:41:1484:-10,-10,0 1/1:39.6872:15:0:0:15:541:-10,-4.51545,0 1/1:66.7799:24:0:0:24:906:-10,-7.22472,0 1/1:42.6975:16:0:0:16:569:-10,-4.81648,0 1/1:60.7593:22:0:0:22:812:-10,-6.62266,0 1/1:54.7387:20:0:0:20:732:-10,-6.0206,0 1/1:81.8312:29:0:0:29:1076:-10,-8.72987,0 1/1:69.7902:25:0:0:25:921:-10,-7.52575,0 0/0:50.5575:26:26:952:0:0:0,-7.82678,-10 0/0:11.4236:13:13:468:0:0:0,-3.91339,-10 1/1:99:39:0:0:39:1448:-10,-10,0 1/1:15.6048:7:0:0:7:264:-10,-2.10721,0 1/1:33.6666:13:0:0:13:411:-10,-3.91339,0 1/1:45.7078:17:0:0:17:601:-10,-5.11751,0 1/1:42.6975:16:0:0:16:569:-10,-4.81648,0 1/1:66.7799:24:0:0:24:905:-10,-7.22472,0 1/1:33.6666:13:0:0:13:472:-10,-3.91339,0 1/1:39.6872:15:0:0:15:568:-10,-4.51545,0 1/1:99:35:0:0:35:1302:-10,-10,0 1/1:33.6666:13:0:0:13:480:-10,-3.91339,0 1/1:42.6975:16:0:0:16:598:-10,-4.81648,0 0/1:99:24:14:523:10:372:-10,0,-10 1/1:54.7387:20:0:0:20:706:-10,-6.0206,0 1/1:48.7181:18:0:0:18:636:-10,-5.41854,0 1/1:96.8826:34:0:0:34:1256:-10,-10,0 1/1:69.7902:25:0:0:25:888:-10,-7.52575,0 1/1:39.6872:15:0:0:15:570:-10,-4.51545,0 1/1:99:35:0:0:35:1306:-10,-10,0 0/0:44.5369:24:24:909:0:0:0,-7.22472,-10 0/0:20.4545:16:16:587:0:0:0,-4.81648,-10 1/1:99:41:0:0:41:1483:-10,-10,0 1/1:57.749:21:0:0:21:796:-10,-6.32163,0 1/1:90.861:32:0:0:32:1114:-10,-9.63296,0 1/1:54.7387:20:0:0:20:710:-10,-6.0206,0 1/1:18.6151:8:0:0:8:301:-10,-2.40824,0 1/1:99:47:0:0:47:1709:-10,-10,0 1/1:21.6254:9:0:0:9:335:-10,-2.70927,0 0/1:99:19:9:334:10:375:-10,0,-10 1/1:36.6769:14:0:0:14:478:-10,-4.21442,0 0/0:35.506:21:21:795:0:0:0,-6.32163,-10 1/1:33.6666:13:0:0:13:483:-10,-3.91339,0 1/1:99:41:0:0:41:1468:-10,-10,0 1/1:51.7284:19:0:0:19:697:-10,-5.71957,0 0/1:99:41:29:1052:12:444:-10,0,-10 1/1:72.8005:26:0:0:26:962:-10,-7.82678,0 1/1:33.6666:13:0:0:13:486:-10,-3.91339,0 1/1:93.8701:33:0:0:33:1200:-10,-9.93399,0 1/1:84.8414:30:0:0:30:1112:-10,-9.0309,0 1/1:42.6975:16:0:0:16:599:-10,-4.81648,0 1/1:84.8414:31:0:0:30:1133:-10,-9.0309,0 1/1:24.6357:10:0:0:10:376:-10,-3.0103,0 1/1:51.7284:19:0:0:19:711:-10,-5.71957,0 1/1:75.8108:27:0:0:27:1014:-10,-8.12781,0 1/1:60.7593:22:0:0:22:810:-10,-6.62266,0 1/1:30.6563:12:0:0:12:454:-10,-3.61236,0 1/1:87.8514:31:0:0:31:1139:-10,-9.33193,0 1/1:45.7078:17:0:0:17:630:-10,-5.11751,0 1/1:69.7902:25:0:0:25:925:-10,-7.52575,0 1/1:63.7696:23:0:0:23:839:-10,-6.92369,0 1/1:21.6254:9:0:0:9:340:-10,-2.70927,0 1/1:18.6151:8:0:0:8:288:-10,-2.40824,0 1/1:99:46:0:0:46:1724:-10,-10,0 1/1:84.8414:30:0:0:30:1099:-10,-9.0309,0 0/1:99:31:19:661:12:432:-10,0,-10 1/1:45.7078:17:0:0:17:646:-10,-5.11751,0 1/1:63.7696:23:0:0:23:856:-10,-6.92369,0 1/1:33.6666:13:0:0:13:493:-10,-3.91339,0 1/1:48.7181:18:0:0:18:673:-10,-5.41854,0 1/1:45.7078:17:0:0:17:645:-10,-5.11751,0 1/1:30.6563:12:0:0:12:455:-10,-3.61236,0 1/1:60.7593:22:0:0:22:816:-10,-6.62266,0 1/1:24.6357:10:0:0:10:374:-10,-3.0103,0 1/1:60.7593:22:0:0:22:810:-10,-6.62266,0 scaffold_245 838616 . T C 376.881 . AB=0.472222;ABP=3.25157;AC=2;AF=0.0108696;AN=184;AO=21;CIGAR=1X;DP=1796;DPB=1796;DPRA=1.0538;EPP=3.94093;EPPR=4.4269;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9509;NS=92;NUMALT=1;ODDS=6.11322;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=769;QR=64733;RO=1772;RPP=48.6112;RPPR=3850.86;RUN=1;SAF=9;SAP=3.94093;SAR=12;SRF=869;SRP=4.4269;SRR=903;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:77.2923:14:14:513:0:0:0,-4.21442,-10 0/0:68.2615:11:11:417:0:0:0,-3.31133,-10 0/0:74.282:13:13:470:0:0:0,-3.91339,-10 0/0:71.2718:12:12:433:0:0:0,-3.61236,-10 0/0:59.2306:8:8:301:0:0:0,-2.40824,-10 0/0:62.2409:9:9:318:0:0:0,-2.70927,-10 0/0:99:49:49:1726:0:0:0,-10,-10 0/0:83.3129:16:16:600:0:0:0,-4.81648,-10 0/0:80.3026:15:15:560:0:0:0,-4.51545,-10 0/0:41.1688:2:2:76:0:0:0,-0.60206,-7.22 0/0:59.2306:8:8:302:0:0:0,-2.40824,-10 0/0:62.2409:10:9:342:0:0:0,-2.70927,-10 0/0:99:29:29:1019:0:0:0,-8.72987,-10 0/0:99:30:30:1053:0:0:0,-9.0309,-10 0/0:99:28:28:960:0:0:0,-8.42884,-10 0/0:99:27:27:1021:0:0:0,-8.12781,-10 0/1:99:27:19:657:8:292:-10,0,-10 0/1:6.18922e-06:9:0:0:9:336:-10,-2.70927,0 0/0:83.3129:17:16:593:0:0:0,-4.81648,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:99:22:22:826:0:0:0,-6.62266,-10 0/0:99:31:31:1159:0:0:0,-9.33193,-10 0/0:62.2409:9:9:342:0:0:0,-2.70927,-10 0/0:86.323:17:17:632:0:0:0,-5.11751,-10 0/0:99:25:25:918:0:0:0,-7.52575,-10 0/0:99:28:28:962:0:0:0,-8.42884,-10 0/0:99:27:26:984:0:0:0,-7.82678,-10 0/0:71.2718:12:12:453:0:0:0,-3.61236,-10 0/0:80.3026:15:15:502:0:0:0,-4.51545,-10 0/0:99:35:35:1326:0:0:0,-10,-10 0/0:68.2615:11:11:405:0:0:0,-3.31133,-10 0/0:68.2615:11:11:413:0:0:0,-3.31133,-10 0/0:92.343:19:19:685:0:0:0,-5.71957,-10 0/0:77.2923:14:14:521:0:0:0,-4.21442,-10 0/0:89.3331:18:18:683:0:0:0,-5.41854,-10 0/0:53.21:6:6:217:0:0:0,-1.80618,-10 0/0:74.282:13:13:485:0:0:0,-3.91339,-10 0/0:99:25:25:882:0:0:0,-7.52575,-10 0/0:77.2923:14:14:532:0:0:0,-4.21442,-10 0/0:95.3524:20:20:740:0:0:0,-6.0206,-10 0/0:99:31:31:1135:0:0:0,-9.33193,-10 0/0:89.3331:18:18:648:0:0:0,-5.41854,-10 0/0:43.0724:20:19:709:1:38:0,-0.91957,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:74.282:13:13:480:0:0:0,-3.91339,-10 0/0:89.3331:18:18:678:0:0:0,-5.41854,-10 0/0:99:36:36:1322:0:0:0,-10,-10 0/0:98.361:21:21:758:0:0:0,-6.32163,-10 0/0:77.2923:14:14:529:0:0:0,-4.21442,-10 0/0:99:35:35:1296:0:0:0,-10,-10 0/0:71.2718:12:12:455:0:0:0,-3.61236,-10 0/0:99:33:33:1219:0:0:0,-9.93399,-10 0/0:62.2409:9:9:293:0:0:0,-2.70927,-10 0/0:53.21:6:6:226:0:0:0,-1.80618,-10 0/0:99:48:48:1760:0:0:0,-10,-10 0/0:74.282:13:13:454:0:0:0,-3.91339,-10 0/0:72.8365:25:24:908:1:27:0,-3.42781,-10 0/0:59.2306:8:8:281:0:0:0,-2.40824,-10 0/0:99:22:22:786:0:0:0,-6.62266,-10 0/0:59.2306:8:8:279:0:0:0,-2.40824,-10 0/0:99:38:38:1396:0:0:0,-10,-10 0/0:0.00960061:14:13:475:1:38:-0.731708,0,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:77.2923:14:14:514:0:0:0,-4.21442,-10 0/0:71.2718:12:12:430:0:0:0,-3.61236,-10 0/0:65.6936:28:27:983:1:38:0,-3.18168,-10 0/0:99:22:22:810:0:0:0,-6.62266,-10 0/0:68.2615:11:11:400:0:0:0,-3.31133,-10 0/0:99:36:36:1329:0:0:0,-10,-10 0/0:68.2615:11:11:383:0:0:0,-3.31133,-10 0/0:92.343:19:19:665:0:0:0,-5.71957,-10 0/0:95.3524:20:20:740:0:0:0,-6.0206,-10 0/0:99:23:23:863:0:0:0,-6.92369,-10 0/0:89.3331:18:18:653:0:0:0,-5.41854,-10 0/0:99:27:27:944:0:0:0,-8.12781,-10 0/0:86.323:17:17:623:0:0:0,-5.11751,-10 0/0:95.3524:20:20:703:0:0:0,-6.0206,-10 0/0:71.2718:12:12:413:0:0:0,-3.61236,-10 0/0:56.2203:7:7:253:0:0:0,-2.10721,-10 0/0:71.2718:12:12:447:0:0:0,-3.61236,-10 0/0:99:30:30:1131:0:0:0,-9.0309,-10 0/0:99:33:33:1184:0:0:0,-9.93399,-10 0/0:80.3026:15:15:563:0:0:0,-4.51545,-10 0/0:99:23:23:863:0:0:0,-6.92369,-10 0/0:92.343:19:19:662:0:0:0,-5.71957,-10 0/0:53.21:6:6:227:0:0:0,-1.80618,-10 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:83.3129:16:16:589:0:0:0,-4.81648,-10 0/0:74.282:13:13:435:0:0:0,-3.91339,-10 0/0:99:25:25:924:0:0:0,-7.52575,-10 0/0:89.3331:18:18:660:0:0:0,-5.41854,-10 0/0:99:22:22:833:0:0:0,-6.62266,-10 scaffold_245 838673 . G A 10367.7 . AB=0.535948;ABP=6.44492;AC=33;AF=0.179348;AN=184;AO=370;CIGAR=1X;DP=1779;DPB=1779;DPRA=1.16494;EPP=4.51272;EPPR=10.1416;GTI=1;LEN=1;MEANALT=1.04;MQM=59.9378;MQMR=59.9801;NS=92;NUMALT=1;ODDS=0.264511;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=13622;QR=51479;RO=1408;RPP=806.455;RPPR=3043.1;RUN=1;SAF=177;SAP=4.51272;SAR=193;SRF=672;SRP=9.32731;SRR=736;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.255237:12:1:16:11:411:-10,-0.933179,0 0/0:33.5356:11:11:418:0:0:0,-3.31133,-10 0/0:39.5562:13:13:468:0:0:0,-3.91339,-10 0/0:36.5459:12:12:431:0:0:0,-3.61236,-10 0/0:24.5047:8:8:282:0:0:0,-2.40824,-10 1/1:15.9393:9:0:0:9:341:-10,-2.70927,0 1/1:99:47:0:0:47:1745:-10,-10,0 0/1:99:16:9:338:7:264:-10,0,-10 0/0:45.5768:15:15:544:0:0:0,-4.51545,-10 0/0:6.44295:2:2:76:0:0:0,-0.60206,-7.22 1/1:12.929:8:0:0:8:300:-10,-2.40824,0 0/0:30.5253:10:10:370:0:0:0,-3.0103,-10 0/0:87.7207:29:29:1084:0:0:0,-8.72987,-10 0/1:99:30:11:404:19:706:-10,0,-10 0/1:99:26:12:416:14:499:-10,0,-10 0/1:99:27:12:431:15:537:-10,0,-10 0/0:78.6901:26:26:961:0:0:0,-7.82678,-10 0/0:27.515:9:9:342:0:0:0,-2.70927,-10 0/0:45.5768:15:15:566:0:0:0,-4.51545,-10 0/0:96.7496:32:32:1143:0:0:0,-9.63296,-10 0/1:99:21:10:374:11:411:-10,0,-10 0/0:93.7405:31:31:1169:0:0:0,-9.33193,-10 0/0:27.515:9:9:333:0:0:0,-2.70927,-10 0/0:51.5974:17:17:620:0:0:0,-5.11751,-10 1/1:64.1041:25:0:0:25:900:-10,-7.52575,0 0/0:81.7004:27:27:964:0:0:0,-8.12781,-10 0/0:78.6901:26:26:947:0:0:0,-7.82678,-10 0/0:39.5562:13:13:489:0:0:0,-3.91339,-10 0/0:45.5768:15:15:525:0:0:0,-4.51545,-10 0/0:99:35:35:1315:0:0:0,-10,-10 0/0:33.5356:11:11:371:0:0:0,-3.31133,-10 0/0:33.5356:11:11:395:0:0:0,-3.31133,-10 0/0:60.6283:20:20:739:0:0:0,-6.0206,-10 0/0:42.5665:14:14:516:0:0:0,-4.21442,-10 1/1:40.0217:18:0:0:17:627:-10,-5.11751,0 0/0:18.4841:6:6:209:0:0:0,-1.80618,-10 1/1:27.9805:13:0:0:13:490:-10,-3.91339,0 0/1:99:25:14:519:11:383:-10,0,-10 0/0:45.5768:15:15:534:0:0:0,-4.51545,-10 1/1:46.0423:19:0:0:19:698:-10,-5.71957,0 0/0:93.7405:31:31:1112:0:0:0,-9.33193,-10 0/0:8.9182:18:17:629:1:37:0,-0.463267,-10 0/0:60.6283:20:20:757:0:0:0,-6.0206,-10 0/0:84.7106:28:28:1048:0:0:0,-8.42884,-10 0/0:39.5562:13:13:480:0:0:0,-3.91339,-10 0/0:54.6077:18:18:680:0:0:0,-5.41854,-10 0/0:99:37:37:1352:0:0:0,-10,-10 0/0:63.6386:21:21:767:0:0:0,-6.32163,-10 0/0:39.5562:13:13:480:0:0:0,-3.91339,-10 1/1:97.2148:36:0:0:36:1357:-10,-10,0 0/0:33.5356:11:11:392:0:0:0,-3.31133,-10 0/0:99:33:33:1141:0:0:0,-9.93399,-10 0/0:27.515:9:9:334:0:0:0,-2.70927,-10 0/0:18.4841:6:6:228:0:0:0,-1.80618,-10 0/0:99:49:49:1815:0:0:0,-10,-10 0/0:42.5665:14:14:528:0:0:0,-4.21442,-10 0/0:75.6798:25:25:932:0:0:0,-7.52575,-10 0/0:24.5047:8:8:299:0:0:0,-2.40824,-10 0/0:63.6386:21:21:746:0:0:0,-6.32163,-10 0/0:24.5047:8:8:281:0:0:0,-2.40824,-10 0/0:99:38:38:1416:0:0:0,-10,-10 1/1:27.9805:13:0:0:13:469:-10,-3.91339,0 0/1:99:33:18:668:15:543:-10,0,-10 0/0:42.5665:14:14:528:0:0:0,-4.21442,-10 0/0:36.5459:12:12:453:0:0:0,-3.61236,-10 0/0:84.7106:28:28:1033:0:0:0,-8.42884,-10 0/1:99:22:13:493:9:340:-10,0,-10 0/0:30.5253:10:10:370:0:0:0,-3.0103,-10 0/1:99:36:17:593:19:712:-10,0,-10 0/0:8.38852:10:9:317:1:16:0,-0.4103,-10 0/0:57.618:19:19:705:0:0:0,-5.71957,-10 0/0:60.6283:20:20:689:0:0:0,-6.0206,-10 0/0:72.6695:24:24:895:0:0:0,-7.22472,-10 0/0:54.6077:18:18:676:0:0:0,-5.41854,-10 0/0:81.7004:27:27:976:0:0:0,-8.12781,-10 1/1:40.0217:17:0:0:17:622:-10,-5.11751,0 0/0:60.6283:20:20:697:0:0:0,-6.0206,-10 0/0:33.5356:11:11:362:0:0:0,-3.31133,-10 0/0:24.5047:8:8:278:0:0:0,-2.40824,-10 0/0:36.5459:12:12:430:0:0:0,-3.61236,-10 0/0:90.7307:30:30:1130:0:0:0,-9.0309,-10 0/0:96.7496:32:32:1167:0:0:0,-9.63296,-10 0/1:99:15:5:190:10:380:-10,0,-10 0/0:66.6489:22:22:805:0:0:0,-6.62266,-10 0/0:57.618:19:19:682:0:0:0,-5.71957,-10 0/0:18.4841:6:6:227:0:0:0,-1.80618,-10 0/0:69.6592:23:23:834:0:0:0,-6.92369,-10 0/0:51.5974:17:17:616:0:0:0,-5.11751,-10 0/0:39.5562:13:13:461:0:0:0,-3.91339,-10 0/1:99:25:12:456:13:458:-10,0,-10 0/1:99:18:8:289:10:376:-10,0,-10 0/0:60.6283:20:20:733:0:0:0,-6.0206,-10 scaffold_259 92889 . C T 936.927 . AB=0.52;ABP=3.27088;AC=5;AF=0.0271739;AN=184;AO=39;CIGAR=1X;DP=1132;DPB=1132;DPRA=1.23463;EPP=3.06598;EPPR=6.68372;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9524;NS=92;NUMALT=1;ODDS=4.02803;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1426;QR=39913;RO=1093;RPP=87.6977;RPPR=2290.37;RUN=1;SAF=20;SAP=3.06598;SAR=19;SRF=515;SRP=10.8955;SRR=578;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.8578:12:12:430:0:0:0,-3.61236,-10 0/0:38.8166:8:8:304:0:0:0,-2.40824,-10 0/0:59.8887:15:15:549:0:0:0,-4.51545,-10 0/0:47.8475:11:11:407:0:0:0,-3.31133,-10 0/0:32.796:6:6:215:0:0:0,-1.80618,-10 0/0:41.8269:9:9:319:0:0:0,-2.70927,-10 0/0:96.0112:27:27:1006:0:0:0,-8.12781,-10 0/0:65.9093:17:17:619:0:0:0,-5.11751,-10 0/0:23.7651:3:3:111:0:0:0,-0.90309,-10 0/0:17.7445:1:1:38:0:0:0,-0.30103,-3.8 0/0:20.7548:2:2:76:0:0:0,-0.60206,-7.22 0/0:23.7651:3:3:114:0:0:0,-0.90309,-10 0/0:71.9299:19:19:687:0:0:0,-5.71957,-10 0/0:93.0014:26:26:964:0:0:0,-7.82678,-10 0/0:62.899:16:16:559:0:0:0,-4.81648,-10 0/0:38.8166:8:8:303:0:0:0,-2.40824,-10 0/0:59.8887:15:15:549:0:0:0,-4.51545,-10 0/0:29.7857:5:5:183:0:0:0,-1.50515,-10 0/0:59.8887:15:15:533:0:0:0,-4.51545,-10 0/0:71.9299:19:19:653:0:0:0,-5.71957,-10 0/0:65.9093:17:17:631:0:0:0,-5.11751,-10 0/0:59.8887:15:15:561:0:0:0,-4.51545,-10 0/0:41.8269:9:9:313:0:0:0,-2.70927,-10 0/0:53.8681:13:13:462:0:0:0,-3.91339,-10 0/0:41.8269:9:9:337:0:0:0,-2.70927,-10 0/0:62.899:16:16:590:0:0:0,-4.81648,-10 0/0:35.8063:7:7:260:0:0:0,-2.10721,-10 0/0:50.8578:12:12:439:0:0:0,-3.61236,-10 0/0:47.8475:11:11:372:0:0:0,-3.31133,-10 0/0:89.9919:25:25:896:0:0:0,-7.52575,-10 0/0:29.7857:5:5:189:0:0:0,-1.50515,-10 0/0:38.8166:8:8:280:0:0:0,-2.40824,-10 0/0:32.796:6:6:223:0:0:0,-1.80618,-10 0/0:41.8269:9:9:314:0:0:0,-2.70927,-10 0/0:41.8269:9:9:337:0:0:0,-2.70927,-10 0/0:41.8269:9:9:324:0:0:0,-2.70927,-10 0/0:44.8372:10:10:380:0:0:0,-3.0103,-10 0/0:68.9196:18:18:648:0:0:0,-5.41854,-10 0/0:44.8372:10:10:378:0:0:0,-3.0103,-10 0/0:53.8681:13:13:479:0:0:0,-3.91339,-10 0/0:83.9711:23:23:866:0:0:0,-6.92369,-10 0/0:47.8475:11:11:395:0:0:0,-3.31133,-10 0/0:53.8681:13:13:464:0:0:0,-3.91339,-10 0/0:71.9299:19:19:686:0:0:0,-5.71957,-10 0/0:44.8372:10:10:363:0:0:0,-3.0103,-10 0/0:47.8475:11:11:417:0:0:0,-3.31133,-10 0/0:96.0112:27:27:1003:0:0:0,-8.12781,-10 0/0:47.8475:11:11:412:0:0:0,-3.31133,-10 0/0:29.7857:5:5:186:0:0:0,-1.50515,-10 0/0:74.9402:20:20:736:0:0:0,-6.0206,-10 0/0:38.8166:8:8:304:0:0:0,-2.40824,-10 0/0:99:28:28:1061:0:0:0,-8.42884,-10 0/0:29.7857:5:5:189:0:0:0,-1.50515,-10 0/0:29.7857:5:5:179:0:0:0,-1.50515,-10 0/0:62.899:16:16:598:0:0:0,-4.81648,-10 0/0:38.8166:8:8:304:0:0:0,-2.40824,-10 0/0:47.8475:11:11:403:0:0:0,-3.31133,-10 0/0:29.7857:5:5:165:0:0:0,-1.50515,-10 0/0:47.8475:11:11:416:0:0:0,-3.31133,-10 0/0:23.7651:3:3:114:0:0:0,-0.90309,-10 0/1:99:20:10:367:10:373:-10,0,-10 0/0:47.8475:11:11:393:0:0:0,-3.31133,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:50.8578:12:12:427:0:0:0,-3.61236,-10 0/0:38.8166:8:8:296:0:0:0,-2.40824,-10 0/0:86.9815:24:24:883:0:0:0,-7.22472,-10 0/0:44.8372:10:10:349:0:0:0,-3.0103,-10 0/0:32.796:6:6:224:0:0:0,-1.80618,-10 0/1:99:17:10:380:7:244:-10,0,-10 0/1:0.00550742:8:0:0:8:301:-10,-2.40824,0 0/0:50.8578:12:12:429:0:0:0,-3.61236,-10 0/0:74.9402:20:20:716:0:0:0,-6.0206,-10 0/0:62.899:16:16:593:0:0:0,-4.81648,-10 0/0:56.8784:14:14:472:0:0:0,-4.21442,-10 0/0:59.8887:15:15:530:0:0:0,-4.51545,-10 0/1:0.00550742:8:0:0:8:290:-10,-2.40824,0 0/0:59.8887:15:15:527:0:0:0,-4.51545,-10 0/0:32.796:6:6:228:0:0:0,-1.80618,-10 0/0:26.7754:4:4:152:0:0:0,-1.20412,-10 0/0:35.8063:7:7:259:0:0:0,-2.10721,-10 0/0:74.9402:20:20:702:0:0:0,-6.0206,-10 0/0:47.8475:11:11:414:0:0:0,-3.31133,-10 0/0:56.8784:14:14:515:0:0:0,-4.21442,-10 0/0:50.8578:12:12:447:0:0:0,-3.61236,-10 0/1:99:22:16:582:6:218:-10,0,-10 0/0:29.7857:5:5:175:0:0:0,-1.50515,-10 0/0:65.9093:17:17:643:0:0:0,-5.11751,-10 0/0:41.8269:9:9:332:0:0:0,-2.70927,-10 0/0:26.7754:4:4:152:0:0:0,-1.20412,-10 0/0:50.8578:12:12:431:0:0:0,-3.61236,-10 0/0:50.8578:12:12:423:0:0:0,-3.61236,-10 0/0:56.8784:14:14:519:0:0:0,-4.21442,-10 scaffold_259 92892 . G A 289.721 . AB=0.565217;ABP=3.86001;AC=2;AF=0.0108696;AN=184;AO=14;CIGAR=1X;DP=1130;DPB=1130;DPRA=1.06049;EPP=3.0103;EPPR=7.49334;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9534;NS=92;NUMALT=1;ODDS=6.79147;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=504;QR=40710;RO=1116;RPP=33.4109;RPPR=2357.38;RUN=1;SAF=7;SAP=3.0103;SAR=7;SRF=526;SRP=10.9801;SRR=590;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.6238:12:12:423:0:0:0,-3.61236,-10 0/0:50.5826:8:8:304:0:0:0,-2.40824,-10 0/0:71.6547:15:15:561:0:0:0,-4.51545,-10 0/0:59.6135:11:11:396:0:0:0,-3.31133,-10 0/0:44.562:6:6:225:0:0:0,-1.80618,-10 0/0:53.5929:9:9:314:0:0:0,-2.70927,-10 0/0:99:27:27:1019:0:0:0,-8.12781,-10 0/0:77.6753:17:17:633:0:0:0,-5.11751,-10 0/0:35.5311:3:3:109:0:0:0,-0.90309,-10 0/0:29.5105:1:1:37:0:0:0,-0.30103,-3.7 0/0:32.5208:2:2:76:0:0:0,-0.60206,-7.22 0/0:35.5311:3:3:114:0:0:0,-0.90309,-10 0/0:83.6959:19:19:693:0:0:0,-5.71957,-10 0/0:99:26:26:929:0:0:0,-7.82678,-10 0/0:48.4416:16:15:516:1:16:0,-2.01236,-10 0/0:50.5826:8:8:297:0:0:0,-2.40824,-10 0/0:71.6547:15:15:561:0:0:0,-4.51545,-10 0/0:41.5517:5:5:184:0:0:0,-1.50515,-10 0/0:71.6547:15:15:543:0:0:0,-4.51545,-10 0/0:83.6959:19:19:656:0:0:0,-5.71957,-10 0/1:99:17:10:374:7:264:-10,0,-10 0/0:71.6547:15:15:566:0:0:0,-4.51545,-10 0/0:53.5929:9:9:317:0:0:0,-2.70927,-10 0/0:65.6341:13:13:479:0:0:0,-3.91339,-10 0/0:53.5929:9:9:335:0:0:0,-2.70927,-10 0/0:74.665:16:16:600:0:0:0,-4.81648,-10 0/0:47.5723:7:7:264:0:0:0,-2.10721,-10 0/0:62.6238:12:12:432:0:0:0,-3.61236,-10 0/0:59.6135:11:11:412:0:0:0,-3.31133,-10 0/0:99:25:25:910:0:0:0,-7.52575,-10 0/0:41.5517:5:5:189:0:0:0,-1.50515,-10 0/0:50.5826:8:8:299:0:0:0,-2.40824,-10 0/1:5.66683e-06:6:0:0:6:224:-10,-1.80618,0 0/0:53.5929:9:9:297:0:0:0,-2.70927,-10 0/0:53.5929:9:9:341:0:0:0,-2.70927,-10 0/0:53.5929:9:9:311:0:0:0,-2.70927,-10 0/0:56.6032:10:10:378:0:0:0,-3.0103,-10 0/0:80.6856:18:18:672:0:0:0,-5.41854,-10 0/0:56.6032:10:10:361:0:0:0,-3.0103,-10 0/0:65.6341:13:13:462:0:0:0,-3.91339,-10 0/0:95.7351:23:23:857:0:0:0,-6.92369,-10 0/0:59.6135:11:11:394:0:0:0,-3.31133,-10 0/0:65.6341:13:13:478:0:0:0,-3.91339,-10 0/0:83.6959:19:19:653:0:0:0,-5.71957,-10 0/0:56.6032:10:10:358:0:0:0,-3.0103,-10 0/0:59.6135:11:11:418:0:0:0,-3.31133,-10 0/0:99:27:27:954:0:0:0,-8.12781,-10 0/0:59.6135:11:11:409:0:0:0,-3.31133,-10 0/0:41.5517:5:5:190:0:0:0,-1.50515,-10 0/0:86.7062:20:20:703:0:0:0,-6.0206,-10 0/0:50.5826:8:8:304:0:0:0,-2.40824,-10 0/0:99:28:28:1058:0:0:0,-8.42884,-10 0/0:41.5517:5:5:188:0:0:0,-1.50515,-10 0/0:41.5517:5:5:185:0:0:0,-1.50515,-10 0/0:74.665:16:16:601:0:0:0,-4.81648,-10 0/0:50.5826:8:8:301:0:0:0,-2.40824,-10 0/0:59.6135:11:11:385:0:0:0,-3.31133,-10 0/0:41.5517:5:5:167:0:0:0,-1.50515,-10 0/0:59.6135:11:11:418:0:0:0,-3.31133,-10 0/0:35.5311:3:3:109:0:0:0,-0.90309,-10 0/0:86.7062:20:20:752:0:0:0,-6.0206,-10 0/0:59.6135:11:11:418:0:0:0,-3.31133,-10 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:62.6238:12:12:422:0:0:0,-3.61236,-10 0/0:50.5826:8:8:280:0:0:0,-2.40824,-10 0/0:98.7471:24:24:870:0:0:0,-7.22472,-10 0/0:56.6032:10:10:344:0:0:0,-3.0103,-10 0/0:44.562:6:6:228:0:0:0,-1.80618,-10 0/0:77.6753:17:17:631:0:0:0,-5.11751,-10 0/0:50.5826:8:8:277:0:0:0,-2.40824,-10 0/0:62.6238:12:12:439:0:0:0,-3.61236,-10 0/0:86.7062:20:20:709:0:0:0,-6.0206,-10 0/0:74.665:16:16:583:0:0:0,-4.81648,-10 0/0:68.6444:14:14:498:0:0:0,-4.21442,-10 0/0:71.6547:15:15:498:0:0:0,-4.51545,-10 0/0:50.5826:8:8:289:0:0:0,-2.40824,-10 0/0:71.6547:15:15:540:0:0:0,-4.51545,-10 0/0:44.562:6:6:226:0:0:0,-1.80618,-10 0/0:38.5414:4:4:152:0:0:0,-1.20412,-10 0/0:47.5723:7:7:244:0:0:0,-2.10721,-10 0/0:86.7062:20:20:713:0:0:0,-6.0206,-10 0/0:59.6135:11:11:402:0:0:0,-3.31133,-10 0/0:68.6444:14:14:525:0:0:0,-4.21442,-10 0/0:62.6238:12:12:448:0:0:0,-3.61236,-10 0/0:92.7267:22:22:803:0:0:0,-6.62266,-10 0/0:41.5517:5:5:190:0:0:0,-1.50515,-10 0/0:77.6753:17:17:625:0:0:0,-5.11751,-10 0/0:53.5929:9:9:319:0:0:0,-2.70927,-10 0/0:38.5414:4:4:152:0:0:0,-1.20412,-10 0/0:62.6238:12:12:447:0:0:0,-3.61236,-10 0/0:62.6238:12:12:444:0:0:0,-3.61236,-10 0/0:68.6444:14:14:505:0:0:0,-4.21442,-10 scaffold_259 126901 . G A 774.711 . AB=0.175097;ABP=238.653;AC=6;AF=0.0326087;AN=184;AO=48;CIGAR=1X;DP=3291;DPB=3291;DPRA=1.37866;EPP=5.9056;EPPR=489.217;GTI=0;LEN=1;MEANALT=1;MQM=58.9375;MQMR=56.0956;NS=92;NUMALT=1;ODDS=8.71001;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1737;QR=118782;RO=3242;RPP=82.8119;RPPR=1086.73;RUN=1;SAF=27;SAP=4.6389;SAR=21;SRF=1138;SRP=628.033;SRR=2104;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:40:40:1423:0:0:0,-10,-10 0/0:99:12:12:435:0:0:0,-3.61236,-10 0/0:99:47:47:1757:0:0:0,-10,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:99:22:22:820:0:0:0,-6.62266,-10 0/0:99:19:19:686:0:0:0,-5.71957,-10 0/0:99:100:100:3684:0:0:0,-10,-10 0/0:99:46:46:1683:0:0:0,-10,-10 0/0:99:30:30:1123:0:0:0,-9.0309,-10 0/0:99:13:13:481:0:0:0,-3.91339,-10 0/0:99:15:15:539:0:0:0,-4.51545,-10 0/0:99:20:20:719:0:0:0,-6.0206,-10 0/0:99:64:64:2397:0:0:0,-10,-10 0/0:99:68:68:2467:0:0:0,-10,-10 0/0:99:29:29:1051:0:0:0,-8.72987,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:99:46:45:1655:1:38:0,-8.38462,-10 0/0:99:23:23:840:0:0:0,-6.92369,-10 0/0:99:43:43:1601:0:0:0,-10,-10 0/0:99:61:61:2272:0:0:0,-10,-10 0/1:37.8278:10:7:242:3:110:-9.33555,0,-10 0/0:99:63:63:2274:0:0:0,-10,-10 0/0:99:16:16:591:0:0:0,-4.81648,-10 0/0:99:40:40:1451:0:0:0,-10,-10 0/0:99:36:36:1296:0:0:0,-10,-10 0/1:99:60:49:1794:11:394:-10,0,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:99:32:32:1190:0:0:0,-9.63296,-10 0/0:99:43:43:1610:0:0:0,-10,-10 0/0:99:55:54:1896:1:19:0,-10,-10 0/0:85.2658:6:6:204:0:0:0,-1.80618,-10 0/0:99:36:36:1292:0:0:0,-10,-10 0/0:99:12:12:445:0:0:0,-3.61236,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:88.2762:7:7:238:0:0:0,-2.10721,-10 0/0:88.2762:7:7:258:0:0:0,-2.10721,-10 0/0:99:21:21:783:0:0:0,-6.32163,-10 0/0:99:45:45:1675:0:0:0,-10,-10 0/0:99:39:39:1329:0:0:0,-10,-10 0/0:99:13:13:464:0:0:0,-3.91339,-10 0/0:99:47:47:1735:0:0:0,-10,-10 0/0:99:49:49:1768:0:0:0,-10,-10 0/0:99:44:44:1639:0:0:0,-10,-10 0/0:99:55:55:1976:0:0:0,-10,-10 0/1:88.0548:84:75:2798:9:315:-10,0,-10 0/0:99:12:12:456:0:0:0,-3.61236,-10 0/0:99:70:69:2565:1:37:0,-10,-10 0/0:99:54:54:1984:0:0:0,-10,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:99:73:73:2683:0:0:0,-10,-10 0/0:99:18:18:661:0:0:0,-5.41854,-10 0/1:99:66:54:1989:12:450:-10,0,-10 0/0:99:21:21:747:0:0:0,-6.32163,-10 0/0:97.3042:10:10:379:0:0:0,-3.0103,-10 0/0:99:54:54:1981:0:0:0,-10,-10 0/0:99:24:24:906:0:0:0,-7.22472,-10 0/0:99:34:34:1226:0:0:0,-10,-10 0/1:99:14:9:333:5:185:-10,0,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/1:91.3127:23:18:682:5:189:-10,0,-10 0/0:99:70:70:2570:0:0:0,-10,-10 0/0:99:50:50:1845:0:0:0,-10,-10 0/0:99:41:41:1494:0:0:0,-10,-10 0/0:99:53:53:1983:0:0:0,-10,-10 0/0:88.2762:7:7:256:0:0:0,-2.10721,-10 0/0:99:56:56:2081:0:0:0,-10,-10 0/0:99:34:34:1249:0:0:0,-10,-10 0/0:99:19:19:688:0:0:0,-5.71957,-10 0/0:99:97:97:3487:0:0:0,-10,-10 0/0:99:30:30:1092:0:0:0,-9.0309,-10 0/0:99:36:36:1295:0:0:0,-10,-10 0/0:99:54:54:2026:0:0:0,-10,-10 0/0:99:51:50:1839:0:0:0,-10,-10 0/0:99:47:47:1738:0:0:0,-10,-10 0/0:99:44:44:1612:0:0:0,-10,-10 0/0:99:30:30:1056:0:0:0,-9.0309,-10 0/0:91.2865:8:8:280:0:0:0,-2.40824,-10 0/0:99:22:22:782:0:0:0,-6.62266,-10 0/0:85.2658:6:6:226:0:0:0,-1.80618,-10 0/0:99:33:33:1202:0:0:0,-9.93399,-10 0/0:99:47:47:1670:0:0:0,-10,-10 0/0:99:37:37:1391:0:0:0,-10,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:99:61:61:2275:0:0:0,-10,-10 0/0:82.2557:5:5:179:0:0:0,-1.50515,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:99:20:20:744:0:0:0,-6.0206,-10 0/0:99:11:11:404:0:0:0,-3.31133,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:99:20:20:746:0:0:0,-6.0206,-10 0/0:99:19:19:718:0:0:0,-5.71957,-10 scaffold_259 126902 . C T 127.247 . AB=0.318182;ABP=9.32731;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=3292;DPB=3292;DPRA=1.36691;EPP=3.25157;EPPR=509.417;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=56.1285;NS=92;NUMALT=1;ODDS=22.5109;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=119986;RO=3283;RPP=22.5536;RPPR=1088.39;RUN=1;SAF=4;SAP=3.25157;SAR=5;SRF=1162;SRP=611.314;SRR=2121;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:40:40:1444:0:0:0,-10,-10 0/0:99:12:12:441:0:0:0,-3.61236,-10 0/0:99:47:47:1716:0:0:0,-10,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/1:99:22:15:555:7:266:-10,0,-10 0/0:99:19:19:702:0:0:0,-5.71957,-10 0/0:99:100:100:3663:0:0:0,-10,-10 0/0:99:46:46:1672:0:0:0,-10,-10 0/0:99:30:30:1133:0:0:0,-9.0309,-10 0/0:99:13:13:469:0:0:0,-3.91339,-10 0/0:99:15:15:522:0:0:0,-4.51545,-10 0/0:99:21:21:721:0:0:0,-6.32163,-10 0/0:99:64:64:2332:0:0:0,-10,-10 0/0:99:68:68:2444:0:0:0,-10,-10 0/0:99:29:29:1068:0:0:0,-8.72987,-10 0/0:99:27:27:972:0:0:0,-8.12781,-10 0/0:99:46:46:1715:0:0:0,-10,-10 0/0:99:23:23:798:0:0:0,-6.92369,-10 0/0:99:43:43:1577:0:0:0,-10,-10 0/0:99:61:61:2197:0:0:0,-10,-10 0/0:99:10:10:354:0:0:0,-3.0103,-10 0/0:99:63:62:2217:1:36:0,-10,-10 0/0:99:16:16:579:0:0:0,-4.81648,-10 0/0:99:40:40:1418:0:0:0,-10,-10 0/0:99:36:36:1316:0:0:0,-10,-10 0/0:99:60:59:2157:1:14:0,-10,-10 0/0:99:28:28:980:0:0:0,-8.42884,-10 0/0:99:32:32:1207:0:0:0,-9.63296,-10 0/0:99:43:43:1605:0:0:0,-10,-10 0/0:99:55:55:1924:0:0:0,-10,-10 0/0:99:6:6:220:0:0:0,-1.80618,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:99:12:12:425:0:0:0,-3.61236,-10 0/0:99:24:24:898:0:0:0,-7.22472,-10 0/0:99:7:7:260:0:0:0,-2.10721,-10 0/0:99:7:7:265:0:0:0,-2.10721,-10 0/0:99:21:21:760:0:0:0,-6.32163,-10 0/0:99:45:45:1662:0:0:0,-10,-10 0/0:99:39:39:1376:0:0:0,-10,-10 0/0:99:13:13:469:0:0:0,-3.91339,-10 0/0:99:47:47:1755:0:0:0,-10,-10 0/0:99:49:49:1789:0:0:0,-10,-10 0/0:99:44:44:1572:0:0:0,-10,-10 0/0:99:55:55:1994:0:0:0,-10,-10 0/0:99:84:84:3067:0:0:0,-10,-10 0/0:99:12:12:453:0:0:0,-3.61236,-10 0/0:99:70:70:2598:0:0:0,-10,-10 0/0:99:54:54:1956:0:0:0,-10,-10 0/0:99:33:33:1193:0:0:0,-9.93399,-10 0/0:99:73:73:2622:0:0:0,-10,-10 0/0:99:18:18:668:0:0:0,-5.41854,-10 0/0:99:66:66:2457:0:0:0,-10,-10 0/0:99:21:21:719:0:0:0,-6.32163,-10 0/0:99:10:10:378:0:0:0,-3.0103,-10 0/0:99:54:54:1988:0:0:0,-10,-10 0/0:99:24:24:898:0:0:0,-7.22472,-10 0/0:99:34:34:1241:0:0:0,-10,-10 0/0:99:14:14:500:0:0:0,-4.21442,-10 0/0:99:32:32:1176:0:0:0,-9.63296,-10 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:99:70:70:2570:0:0:0,-10,-10 0/0:99:50:50:1848:0:0:0,-10,-10 0/0:99:41:41:1484:0:0:0,-10,-10 0/0:99:53:53:1992:0:0:0,-10,-10 0/0:99:7:7:240:0:0:0,-2.10721,-10 0/0:99:56:56:2075:0:0:0,-10,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:99:19:19:699:0:0:0,-5.71957,-10 0/0:99:97:97:3543:0:0:0,-10,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:99:36:36:1333:0:0:0,-10,-10 0/0:99:54:54:1991:0:0:0,-10,-10 0/0:99:51:51:1845:0:0:0,-10,-10 0/0:99:47:47:1725:0:0:0,-10,-10 0/0:99:44:44:1578:0:0:0,-10,-10 0/0:99:30:30:1079:0:0:0,-9.0309,-10 0/0:99:8:8:301:0:0:0,-2.40824,-10 0/0:99:22:22:779:0:0:0,-6.62266,-10 0/0:99:6:6:226:0:0:0,-1.80618,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:99:47:47:1727:0:0:0,-10,-10 0/0:99:37:37:1399:0:0:0,-10,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:99:61:61:2263:0:0:0,-10,-10 0/0:97.7599:5:5:186:0:0:0,-1.50515,-10 0/0:99:27:27:1023:0:0:0,-8.12781,-10 0/0:99:20:20:744:0:0:0,-6.0206,-10 0/0:99:11:11:414:0:0:0,-3.31133,-10 0/0:99:35:35:1319:0:0:0,-10,-10 0/0:99:20:20:751:0:0:0,-6.0206,-10 0/0:99:19:19:697:0:0:0,-5.71957,-10 scaffold_259 126925 . G A 658.199 . AB=0.217687;ABP=104.774;AC=4;AF=0.0217391;AN=184;AO=56;CIGAR=1X;DP=3280;DPB=3280;DPRA=1.2377;EPP=29.2231;EPPR=607.229;GTI=4;LEN=1;MEANALT=1.0625;MQM=46.3929;MQMR=56.3652;NS=92;NUMALT=1;ODDS=0.363928;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2032;QR=117039;RO=3223;RPP=124.613;RPPR=7001.67;RUN=1;SAF=15;SAP=29.2231;SAR=41;SRF=1138;SRP=607.229;SRR=2085;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:40:40:1430:0:0:0,-10,-10 0/0:99:12:12:429:0:0:0,-3.61236,-10 0/0:99:47:47:1752:0:0:0,-10,-10 0/0:99:29:29:1034:0:0:0,-8.72987,-10 0/0:99:22:22:831:0:0:0,-6.62266,-10 0/0:99:19:19:694:0:0:0,-5.71957,-10 0/0:99:100:100:3657:0:0:0,-10,-10 0/0:99:46:46:1642:0:0:0,-10,-10 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:99:13:13:483:0:0:0,-3.91339,-10 0/0:99:15:15:543:0:0:0,-4.51545,-10 0/0:99:21:21:724:0:0:0,-6.32163,-10 0/0:99:64:64:2295:0:0:0,-10,-10 0/0:99:67:67:2442:0:0:0,-10,-10 0/0:99:29:29:1000:0:0:0,-8.72987,-10 0/0:99:26:26:935:0:0:0,-7.82678,-10 0/1:80.8898:46:40:1458:6:228:-10,0,-10 0/0:99:23:23:819:0:0:0,-6.92369,-10 0/0:99:43:43:1569:0:0:0,-10,-10 0/0:99:61:58:2115:3:110:0,-3.53998,-10 0/0:4.30352e-06:10:9:342:1:29:-0.8897,0,-10 0/0:99:62:62:2240:0:0:0,-10,-10 0/0:99:16:16:594:0:0:0,-4.81648,-10 0/0:99:40:40:1507:0:0:0,-10,-10 0/0:99:36:36:1337:0:0:0,-10,-10 0/0:99:60:57:2056:2:76:0,-7.67419,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/0:99:43:43:1615:0:0:0,-10,-10 0/0:99:55:52:1849:3:88:0,-3.92444,-10 0/0:87.0453:6:6:226:0:0:0,-1.80618,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:99:12:12:424:0:0:0,-3.61236,-10 0/0:99:24:24:849:0:0:0,-7.22472,-10 0/1:3.88279:7:5:189:2:75:-6.34001,0,-10 0/0:90.055:7:7:264:0:0:0,-2.10721,-10 0/0:99:21:21:769:0:0:0,-6.32163,-10 0/0:99:45:44:1549:1:38:0,-8.09314,-10 0/0:99:39:39:1354:0:0:0,-10,-10 0/0:5.55491e-06:13:12:380:1:38:-1.00055,0,-10 0/1:99:47:34:1250:13:485:-10,0,-10 0/0:99:49:49:1770:0:0:0,-10,-10 0/0:1.2146e-05:44:41:1521:3:113:-1.42337,0,-10 0/0:99:55:53:1936:2:76:0,-6.16492,-10 0/0:99:83:83:2983:0:0:0,-10,-10 0/0:99:12:12:451:0:0:0,-3.61236,-10 0/0:99:70:70:2522:0:0:0,-10,-10 0/0:99:54:54:1918:0:0:0,-10,-10 0/0:99:33:33:1207:0:0:0,-9.93399,-10 0/0:99:73:72:2592:1:38:0,-10,-10 0/0:99:18:18:681:0:0:0,-5.41854,-10 0/0:0.0107013:66:61:2228:5:190:-4.56321,0,-10 0/0:99:21:21:764:0:0:0,-6.32163,-10 0/0:99:10:10:378:0:0:0,-3.0103,-10 0/0:99:54:54:1950:0:0:0,-10,-10 0/0:99:23:23:861:0:0:0,-6.92369,-10 0/0:99:34:34:1219:0:0:0,-10,-10 0/0:99:14:14:511:0:0:0,-4.21442,-10 0/0:99:32:32:1187:0:0:0,-9.63296,-10 0/0:99:23:23:865:0:0:0,-6.92369,-10 0/0:99:69:69:2502:0:0:0,-10,-10 0/0:99:50:50:1774:0:0:0,-10,-10 0/0:99:41:41:1489:0:0:0,-10,-10 0/0:99:52:52:1897:0:0:0,-10,-10 0/0:90.055:7:7:265:0:0:0,-2.10721,-10 0/0:99:56:56:2012:0:0:0,-10,-10 0/0:99:34:34:1200:0:0:0,-10,-10 0/0:99:19:19:664:0:0:0,-5.71957,-10 0/0:99:96:96:3380:0:0:0,-10,-10 0/0:99:30:30:1117:0:0:0,-9.0309,-10 0/0:99:36:36:1328:0:0:0,-10,-10 0/0:99:54:54:2006:0:0:0,-10,-10 0/0:99:51:51:1828:0:0:0,-10,-10 0/0:99:47:47:1711:0:0:0,-10,-10 0/0:99:42:42:1510:0:0:0,-10,-10 0/0:99:30:29:1066:1:16:0,-5.95378,-10 0/0:93.0641:8:8:278:0:0:0,-2.40824,-10 0/0:99:22:22:778:0:0:0,-6.62266,-10 0/0:87.0453:6:6:225:0:0:0,-1.80618,-10 0/0:99:33:33:1219:0:0:0,-9.93399,-10 0/1:99:47:36:1280:11:417:-10,0,-10 0/0:99:37:37:1373:0:0:0,-10,-10 0/0:99:27:27:1017:0:0:0,-8.12781,-10 0/0:99:30:30:1094:0:0:0,-9.0309,-10 0/0:99:59:59:2183:0:0:0,-10,-10 0/0:84.0358:5:5:176:0:0:0,-1.50515,-10 0/0:99:27:27:1003:0:0:0,-8.12781,-10 0/0:99:20:20:748:0:0:0,-6.0206,-10 0/0:99:11:11:404:0:0:0,-3.31133,-10 0/0:99:35:35:1311:0:0:0,-10,-10 0/0:99:20:20:726:0:0:0,-6.0206,-10 0/0:96.2865:19:18:640:1:15:0,-2.94082,-10 scaffold_259 127142 . G T 142.959 . AB=0.153333;ABP=159.588;AC=5;AF=0.0271739;AN=184;AO=39;CIGAR=1X;DP=2635;DPB=2635;DPRA=0.862382;EPP=87.6977;EPPR=5272.85;GTI=6;LEN=1;MEANALT=1;MQM=48.7179;MQMR=57.8683;NS=92;NUMALT=1;ODDS=2.36228;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1372;QR=94600;RO=2596;RPP=87.6977;RPPR=5272.85;RUN=1;SAF=39;SAP=87.6977;SAR=0;SRF=2596;SRP=5640.15;SRR=0;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:24:24:896:0:0:0,-7.22472,-10 0/0:94.3977:10:10:358:0:0:0,-3.0103,-10 0/0:99:35:35:1250:0:0:0,-10,-10 0/0:99:24:24:860:0:0:0,-7.22472,-10 0/0:99:16:16:580:0:0:0,-4.81648,-10 0/0:99:16:16:556:0:0:0,-4.81648,-10 0/0:99:36:36:1296:0:0:0,-10,-10 0/0:99:35:35:1291:0:0:0,-10,-10 0/0:99:15:15:535:0:0:0,-4.51545,-10 0/0:76.3501:4:4:152:0:0:0,-1.20412,-10 0/0:97.3939:11:11:417:0:0:0,-3.31133,-10 0/0:4.28577e-05:17:15:566:2:54:-2.14603,0,-10 0/0:8.07786e-07:39:36:1295:3:92:-0.807396,0,-10 0/0:99:74:74:2679:0:0:0,-10,-10 0/1:27.0157:41:36:1326:5:190:-10,0,-10 0/0:99:18:18:639:0:0:0,-5.41854,-10 0/0:2.05867e-06:30:28:1026:2:76:-0.827589,0,-10 0/0:94.3977:10:10:372:0:0:0,-3.0103,-10 0/0:99:29:29:1038:0:0:0,-8.72987,-10 0/0:99:47:47:1700:0:0:0,-10,-10 0/0:99:13:13:420:0:0:0,-3.91339,-10 0/0:99:46:46:1684:0:0:0,-10,-10 0/0:91.4:9:9:337:0:0:0,-2.70927,-10 0/0:99:25:25:922:0:0:0,-7.52575,-10 0/0:99:37:37:1355:0:0:0,-10,-10 0/0:85.4448:23:22:817:1:38:0,-1.76196,-10 0/0:99:35:34:1196:1:16:0,-7.39198,-10 0/0:99:26:26:943:0:0:0,-7.82678,-10 0/0:99:44:44:1600:0:0:0,-10,-10 0/0:99:52:52:1876:0:0:0,-10,-10 0/0:91.4:9:9:303:0:0:0,-2.70927,-10 0/0:99:24:24:873:0:0:0,-7.22472,-10 0/0:99:24:24:885:0:0:0,-7.22472,-10 0/0:99:13:13:493:0:0:0,-3.91339,-10 0/0:99:24:24:890:0:0:0,-7.22472,-10 0/0:99:12:12:422:0:0:0,-3.61236,-10 0/0:99:15:15:542:0:0:0,-4.51545,-10 0/0:99:39:39:1429:0:0:0,-10,-10 0/1:99:25:19:693:6:228:-10,0,-10 0/0:99:22:22:805:0:0:0,-6.62266,-10 0/1:19.596:44:39:1458:5:190:-10,0,-10 0/0:99:23:23:874:0:0:0,-6.92369,-10 0/0:99:37:37:1335:0:0:0,-10,-10 0/0:99:57:57:2032:0:0:0,-10,-10 0/0:4.5433e-05:25:23:828:2:76:-2.17137,0,-10 0/0:99:12:12:436:0:0:0,-3.61236,-10 0/0:99:57:57:2083:0:0:0,-10,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:99:14:14:502:0:0:0,-4.21442,-10 0/0:99:76:76:2784:0:0:0,-10,-10 0/1:22.7434:10:7:220:3:114:-9.70888,0,-10 0/0:99:48:48:1743:0:0:0,-10,-10 0/0:99:20:20:736:0:0:0,-6.0206,-10 0/0:94.3977:10:10:377:0:0:0,-3.0103,-10 0/0:99:59:59:2152:0:0:0,-10,-10 0/0:99:19:19:712:0:0:0,-5.71957,-10 0/0:99:34:34:1261:0:0:0,-10,-10 0/0:94.3977:10:10:363:0:0:0,-3.0103,-10 0/0:99:23:23:816:0:0:0,-6.92369,-10 0/0:90.6948:17:16:591:1:16:0,-2.28706,-10 0/0:99:41:41:1501:0:0:0,-10,-10 0/0:99:40:40:1433:0:0:0,-10,-10 0/0:99:55:55:2050:0:0:0,-10,-10 0/0:99:24:24:858:0:0:0,-7.22472,-10 0/0:99:14:14:488:0:0:0,-4.21442,-10 0/0:99:42:42:1510:0:0:0,-10,-10 0/0:99:28:28:1061:0:0:0,-8.42884,-10 0/0:2.06952e-06:15:14:499:1:38:-0.460641,0,-10 0/0:99:69:69:2488:0:0:0,-10,-10 0/0:99:20:20:727:0:0:0,-6.0206,-10 0/0:99:27:27:1015:0:0:0,-8.12781,-10 0/0:99:53:53:1900:0:0:0,-10,-10 0/0:99:26:26:945:0:0:0,-7.82678,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:99:41:41:1427:0:0:0,-10,-10 0/0:99:23:23:867:0:0:0,-6.92369,-10 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:99:19:19:697:0:0:0,-5.71957,-10 0/0:85.3806:7:7:263:0:0:0,-2.10721,-10 0/0:0.372855:9:7:260:2:76:-6.06703,0,-10 0/0:99:73:73:2686:0:0:0,-10,-10 0/0:99:45:45:1673:0:0:0,-10,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:99:42:42:1538:0:0:0,-10,-10 0/0:99:42:42:1578:0:0:0,-10,-10 0/0:79.3603:5:5:188:0:0:0,-1.50515,-10 0/1:15.8315:30:26:957:4:152:-9.46693,0,-10 0/0:99:18:18:631:0:0:0,-5.41854,-10 0/0:88.3905:8:8:300:0:0:0,-2.40824,-10 0/0:99:18:18:665:0:0:0,-5.41854,-10 0/0:99:18:18:652:0:0:0,-5.41854,-10 0/0:96.2288:19:18:684:1:16:0,-2.84082,-10 scaffold_259 127219 . TC T 270.07 . AB=0.187192;ABP=175.541;AC=9;AF=0.048913;AN=184;AO=64;CIGAR=1M1D1M;DP=2486;DPB=2464.67;DPRA=1.06932;EPP=141.985;EPPR=5080.84;GTI=6;LEN=1;MEANALT=1.23529;MQM=53.1875;MQMR=52.6998;NS=92;NUMALT=1;ODDS=0.754629;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2230;QR=86325;RO=2402;RPP=141.985;RPPR=5080.84;RUN=1;SAF=0;SAP=141.985;SAR=64;SRF=0;SRP=5218.89;SRR=2402;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:99:14:14:467:0:0:0,-4.21442,-10 0|0:74.3103:4:4:148:0:0:0,-1.20412,-10 0|0:99:24:24:840:0:0:0,-7.22472,-10 0|0:99:26:26:972:0:0:0,-7.82678,-10 0|1:27.4894:11:8:301:3:108:-8.98615,0,-10 0|0:0.0146896:11:9:334:2:64:-4.50903,0,-10 0|0:99:51:51:1859:0:0:0,-10,-10 0|1:9.19707:36:31:1146:4:147:-7.57895,0,-10 0|0:99:20:20:743:0:0:0,-6.0206,-10 0|0:80.3309:6:6:221:0:0:0,-1.80618,-10 0|0:98.3605:13:12:414:0:0:0,-3.61236,-10 0|0:99:13:13:462:0:0:0,-3.91339,-10 0|0:99:40:39:1461:0:0:0,-10,-10 0|0:99:64:64:2280:0:0:0,-10,-10 0|0:99:35:35:1275:0:0:0,-10,-10 0|0:99:33:33:1195:0:0:0,-9.93399,-10 0|0:99:27:27:919:0:0:0,-8.12781,-10 0|1:26.6618:12:9:308:3:109:-8.9034,0,-10 0|0:99:37:37:1360:0:0:0,-10,-10 0|0:99:35:35:1224:0:0:0,-10,-10 0|0:99:19:19:643:0:0:0,-5.71957,-10 0|0:99:45:45:1641:0:0:0,-10,-10 0|0:98.3605:12:12:441:0:0:0,-3.61236,-10 0|0:99:37:37:1352:0:0:0,-10,-10 0|0:99:32:32:1172:0:0:0,-9.63296,-10 0|0:99:30:30:1059:0:0:0,-9.0309,-10 0|0:99:25:24:881:0:0:0,-7.22472,-10 0|0:99:18:18:665:0:0:0,-5.41854,-10 0|0:99:40:40:1409:0:0:0,-10,-10 0|0:99:49:48:1695:0:0:0,-10,-10 0|0:74.3103:4:4:115:0:0:0,-1.20412,-10 0|0:99:25:25:900:0:0:0,-7.52575,-10 0|0:99:28:28:1007:0:0:0,-8.42884,-10 0|0:99:25:25:875:0:0:0,-7.52575,-10 0|0:99:15:15:534:0:0:0,-4.51545,-10 0|0:83.3402:7:7:257:0:0:0,-2.10721,-10 0|0:95.3799:11:11:400:0:0:0,-3.31133,-10 0|0:99:34:33:1178:0:0:0,-9.93399,-10 0|0:99:35:35:1241:0:0:0,-10,-10 0|0:98.3605:12:12:446:0:0:0,-3.61236,-10 0|0:99:44:44:1601:0:0:0,-10,-10 0|0:99:14:14:504:0:0:0,-4.21442,-10 0|0:99:25:25:928:0:0:0,-7.52575,-10 0|0:99:38:38:1328:0:0:0,-10,-10 0|0:99:20:20:735:0:0:0,-6.0206,-10 0|0:99:15:15:553:0:0:0,-4.51545,-10 0|0:0.00186601:71:63:2262:7:195:-5.67789,0,-10 0|0:98.4363:43:41:1461:2:75:0,-2.8636,-10 0|1:54.6794:18:14:504:4:152:-10,0,-10 0|0:99:57:56:2037:0:0:0,-10,-10 0|0:99:17:17:626:0:0:0,-5.11751,-10 0|0:99:46:46:1695:0:0:0,-10,-10 0|0:99:23:22:769:0:0:0,-6.62266,-10 0|0:92.3709:11:10:367:0:0:0,-3.0103,-10 0|0:99:52:50:1818:0:0:0,-10,-10 0|0:99:14:14:509:0:0:0,-4.21442,-10 0|0:0.783932:23:20:712:3:110:-6.5912,0,-10 0|0:92.3709:11:10:331:0:0:0,-3.0103,-10 0|0:99:37:37:1365:0:0:0,-10,-10 0|0:99:20:20:689:0:0:0,-6.0206,-10 0|0:99:46:46:1630:0:0:0,-10,-10 0|0:99:30:28:979:0:0:0,-8.42884,-10 0|0:99:66:65:2267:0:0:0,-10,-10 0|0:1.01223:37:33:1184:4:145:-7.09423,0,-10 0|0:99:19:19:690:0:0:0,-5.71957,-10 0|0:0.128312:33:29:1008:4:125:-6.24045,0,-10 0|0:99:23:23:854:0:0:0,-6.92369,-10 0|0:99:19:19:695:0:0:0,-5.71957,-10 0|1:29.9133:62:54:1942:7:229:-10,0,-10 0|1:63.905:12:8:290:4:151:-10,0,-10 0|0:99:22:21:751:0:0:0,-6.32163,-10 0|0:99:48:48:1705:0:0:0,-10,-10 0|0:99:34:34:1215:0:0:0,-10,-10 0|0:99:20:20:746:0:0:0,-6.0206,-10 0|0:99:52:52:1880:0:0:0,-10,-10 0|1:15.7621:19:16:580:3:113:-7.81342,0,-10 0|0:99:20:20:693:0:0:0,-6.0206,-10 0|1:99:13:7:250:6:211:-10,0,-10 0|0:71.3:3:3:106:0:0:0,-0.90309,-9.89333 0|0:99:15:15:542:0:0:0,-4.51545,-10 0|0:99:30:30:1114:0:0:0,-9.0309,-10 0|0:99:46:46:1613:0:0:0,-10,-10 0|1:44.1795:20:16:596:4:145:-10,0,-10 0|0:99:34:34:1166:0:0:0,-10,-10 0|0:5.54673e-06:44:40:1452:3:113:-1.47956,0,-10 0|0:77.3206:5:5:167:0:0:0,-1.50515,-10 0|0:99:25:24:860:0:0:0,-7.22472,-10 0|0:99:21:21:759:0:0:0,-6.32163,-10 0|0:71.3:3:3:114:0:0:0,-0.90309,-10 0|0:99:16:16:594:0:0:0,-4.81648,-10 0|0:75.1789:20:19:706:1:38:0,-0.91957,-10 0|0:99:15:15:543:0:0:0,-4.51545,-10 scaffold_259 217894 . C T 859.955 . AB=0.333333;ABP=7.35324;AC=3;AF=0.0163043;AN=184;AO=34;CIGAR=1X;DP=1447;DPB=1447;DPRA=1.47752;EPP=4.03217;EPPR=3.03491;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9816;NS=92;NUMALT=1;ODDS=2.15251;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1274;QR=51509;RO=1412;RPP=76.8404;RPPR=3069.13;RUN=1;SAF=15;SAP=4.03217;SAR=19;SRF=708;SRP=3.03491;SRR=704;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.5588:11:11:417:0:0:0,-3.31133,-10 0/0:16.4764:3:3:114:0:0:0,-0.90309,-10 0/0:37.5485:10:10:370:0:0:0,-3.0103,-10 0/0:46.5794:13:13:444:0:0:0,-3.91339,-10 0/0:31.5279:8:8:274:0:0:0,-2.40824,-10 0/0:22.497:5:5:181:0:0:0,-1.50515,-10 0/0:94.7429:29:29:1086:0:0:0,-8.72987,-10 0/0:88.7233:27:27:982:0:0:0,-8.12781,-10 0/0:61.6309:18:18:654:0:0:0,-5.41854,-10 0/0:22.497:5:5:189:0:0:0,-1.50515,-10 0/0:25.5073:6:6:228:0:0:0,-1.80618,-10 0/0:25.5073:6:6:222:0:0:0,-1.80618,-10 0/0:70.6618:21:21:785:0:0:0,-6.32163,-10 0/0:82.7029:25:25:918:0:0:0,-7.52575,-10 0/0:67.6515:20:20:745:0:0:0,-6.0206,-10 0/0:70.6618:21:21:796:0:0:0,-6.32163,-10 0/0:82.7029:25:25:905:0:0:0,-7.52575,-10 0/0:40.5588:11:11:382:0:0:0,-3.31133,-10 0/0:55.6103:16:16:583:0:0:0,-4.81648,-10 0/0:99:33:33:1207:0:0:0,-9.93399,-10 0/0:64.6412:19:19:685:0:0:0,-5.71957,-10 0/0:76.6824:23:23:863:0:0:0,-6.92369,-10 0/0:25.5073:6:6:212:0:0:0,-1.80618,-10 0/0:58.6206:17:17:629:0:0:0,-5.11751,-10 0/0:52.6:15:15:540:0:0:0,-4.51545,-10 0/0:79.6926:24:24:821:0:0:0,-7.22472,-10 0/0:52.6:15:15:535:0:0:0,-4.51545,-10 0/0:49.5897:14:14:531:0:0:0,-4.21442,-10 0/0:49.5897:14:14:522:0:0:0,-4.21442,-10 0/0:94.7429:29:29:1094:0:0:0,-8.72987,-10 0/0:28.5176:7:7:262:0:0:0,-2.10721,-10 0/0:34.5382:9:9:317:0:0:0,-2.70927,-10 0/0:52.6:15:15:534:0:0:0,-4.51545,-10 0/0:37.5485:10:10:341:0:0:0,-3.0103,-10 0/0:61.6309:18:18:640:0:0:0,-5.41854,-10 0/0:13.4661:2:2:75:0:0:0,-0.60206,-7.125 0/0:40.5588:11:11:394:0:0:0,-3.31133,-10 0/0:67.6515:20:20:740:0:0:0,-6.0206,-10 0/0:46.5794:13:13:459:0:0:0,-3.91339,-10 0/0:64.6412:19:19:661:0:0:0,-5.71957,-10 0/0:73.6721:22:22:800:0:0:0,-6.62266,-10 0/0:58.6206:17:17:634:0:0:0,-5.11751,-10 0/0:49.5897:14:14:489:0:0:0,-4.21442,-10 0/0:76.6824:23:23:854:0:0:0,-6.92369,-10 0/0:73.6721:22:22:802:0:0:0,-6.62266,-10 0/0:55.6103:16:16:607:0:0:0,-4.81648,-10 0/0:97.7518:30:30:1132:0:0:0,-9.0309,-10 0/0:67.6515:20:20:736:0:0:0,-6.0206,-10 0/0:37.5485:10:10:366:0:0:0,-3.0103,-10 0/0:88.7233:27:27:960:0:0:0,-8.12781,-10 0/0:49.5897:14:14:467:0:0:0,-4.21442,-10 0/0:88.7233:27:27:984:0:0:0,-8.12781,-10 0/0:34.5382:9:9:339:0:0:0,-2.70927,-10 0/0:28.5176:7:7:266:0:0:0,-2.10721,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:43.5691:12:12:451:0:0:0,-3.61236,-10 0/0:64.6412:19:19:693:0:0:0,-5.71957,-10 0/0:25.5073:6:6:226:0:0:0,-1.80618,-10 0/0:58.6206:17:17:632:0:0:0,-5.11751,-10 0/0:25.5073:6:6:226:0:0:0,-1.80618,-10 0/0:79.6926:24:24:897:0:0:0,-7.22472,-10 0/0:49.5897:14:14:506:0:0:0,-4.21442,-10 0/0:70.6618:21:21:766:0:0:0,-6.32163,-10 0/0:46.5794:13:13:489:0:0:0,-3.91339,-10 0/0:37.5485:10:10:377:0:0:0,-3.0103,-10 0/0:85.7131:26:26:947:0:0:0,-7.82678,-10 0/0:52.6:15:15:502:0:0:0,-4.51545,-10 0/0:19.4867:4:4:130:0:0:0,-1.20412,-10 0/0:99:35:35:1316:0:0:0,-10,-10 0/0:28.5176:7:7:238:0:0:0,-2.10721,-10 0/0:43.5691:12:12:432:0:0:0,-3.61236,-10 1/1:38.4017:28:0:0:28:1060:-10,-8.42884,0 0/1:99:18:12:423:6:214:-10,0,-10 0/0:55.6103:16:16:601:0:0:0,-4.81648,-10 0/0:85.7131:26:26:934:0:0:0,-7.82678,-10 0/0:34.5382:9:9:336:0:0:0,-2.70927,-10 0/0:46.5794:13:13:460:0:0:0,-3.91339,-10 0/0:52.6:16:15:525:0:0:0,-4.51545,-10 0/0:19.4867:4:4:151:0:0:0,-1.20412,-10 0/0:31.5279:8:8:304:0:0:0,-2.40824,-10 0/0:88.7233:27:27:992:0:0:0,-8.12781,-10 0/0:85.7131:26:26:907:0:0:0,-7.82678,-10 0/0:37.5485:10:10:374:0:0:0,-3.0103,-10 0/0:52.6:15:15:502:0:0:0,-4.51545,-10 0/0:49.5897:14:14:530:0:0:0,-4.21442,-10 0/0:19.4867:4:4:152:0:0:0,-1.20412,-10 0/0:55.6103:16:16:608:0:0:0,-4.81648,-10 0/0:40.5588:11:11:417:0:0:0,-3.31133,-10 0/0:10.4558:1:1:38:0:0:0,-0.30103,-3.8 0/0:40.5588:11:11:412:0:0:0,-3.31133,-10 0/0:58.6206:17:17:599:0:0:0,-5.11751,-10 0/0:49.5897:14:14:509:0:0:0,-4.21442,-10 scaffold_259 348928 . G A 201.102 . AB=0.45;ABP=3.44459;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1613;DPB=1613;DPRA=1.1425;EPP=3.25157;EPPR=3.09705;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9482;NS=92;NUMALT=1;ODDS=9.83419;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=329;QR=58457;RO=1602;RPP=22.5536;RPPR=3481.71;RUN=1;SAF=5;SAP=3.25157;SAR=4;SRF=805;SRP=3.09705;SRR=797;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:22:22:767:0:0:0,-6.62266,-10 0/0:72.8131:12:12:440:0:0:0,-3.61236,-10 0/0:84.8542:16:16:579:0:0:0,-4.81648,-10 0/0:84.8542:16:16:606:0:0:0,-4.81648,-10 0/0:72.8131:13:12:451:0:0:0,-3.61236,-10 0/0:60.7719:8:8:304:0:0:0,-2.40824,-10 0/0:99:44:44:1615:0:0:0,-10,-10 0/0:99:23:23:841:0:0:0,-6.92369,-10 0/0:75.8234:13:13:491:0:0:0,-3.91339,-10 0/0:51.741:5:5:167:0:0:0,-1.50515,-10 0/0:66.7925:10:10:366:0:0:0,-3.0103,-10 0/0:54.7513:6:6:197:0:0:0,-1.80618,-10 0/0:99:30:30:1033:0:0:0,-9.0309,-10 0/0:99:21:21:775:0:0:0,-6.32163,-10 0/0:99:31:30:1078:0:0:0,-9.0309,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:99:23:23:825:0:0:0,-6.92369,-10 0/0:54.7513:6:6:226:0:0:0,-1.80618,-10 0/0:99:27:27:1010:0:0:0,-8.12781,-10 0/0:99:31:31:1145:0:0:0,-9.33193,-10 0/0:57.7616:7:7:243:0:0:0,-2.10721,-10 0/0:99:24:24:896:0:0:0,-7.22472,-10 0/0:72.8131:12:12:455:0:0:0,-3.61236,-10 0/0:84.8542:16:16:605:0:0:0,-4.81648,-10 0/0:72.8131:12:12:410:0:0:0,-3.61236,-10 0/0:99:25:25:905:0:0:0,-7.52575,-10 0/0:84.8542:16:16:580:0:0:0,-4.81648,-10 0/0:84.8542:16:16:564:0:0:0,-4.81648,-10 0/0:96.8931:20:20:716:0:0:0,-6.0206,-10 0/0:99:26:26:934:0:0:0,-7.82678,-10 0/0:69.8028:11:11:413:0:0:0,-3.31133,-10 0/0:69.8028:11:11:404:0:0:0,-3.31133,-10 0/0:90.8743:18:18:629:0:0:0,-5.41854,-10 0/0:69.8028:11:11:409:0:0:0,-3.31133,-10 0/0:84.8542:16:16:607:0:0:0,-4.81648,-10 0/0:54.7513:6:6:227:0:0:0,-1.80618,-10 0/0:63.7822:9:9:340:0:0:0,-2.70927,-10 0/0:99:26:26:889:0:0:0,-7.82678,-10 0/0:69.8028:11:11:416:0:0:0,-3.31133,-10 0/0:72.8131:12:12:451:0:0:0,-3.61236,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:78.8337:14:14:484:0:0:0,-4.21442,-10 0/0:93.884:19:19:699:0:0:0,-5.71957,-10 0/0:99:40:40:1466:0:0:0,-10,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:90.8743:18:18:638:0:0:0,-5.41854,-10 0/0:99:42:42:1508:0:0:0,-10,-10 0/0:81.8439:15:15:521:0:0:0,-4.51545,-10 0/0:63.7822:9:9:313:0:0:0,-2.70927,-10 0/0:99:28:28:961:0:0:0,-8.42884,-10 0/0:66.7925:10:10:351:0:0:0,-3.0103,-10 0/0:99:22:22:773:0:0:0,-6.62266,-10 0/0:72.8131:12:12:451:0:0:0,-3.61236,-10 0/0:48.7307:4:4:145:0:0:0,-1.20412,-10 0/0:99:40:40:1457:0:0:0,-10,-10 0/0:60.7719:8:8:304:0:0:0,-2.40824,-10 0/0:90.8743:18:18:640:0:0:0,-5.41854,-10 0/0:63.7822:9:9:336:0:0:0,-2.70927,-10 0/0:99:22:22:821:0:0:0,-6.62266,-10 0/0:63.7822:9:9:336:0:0:0,-2.70927,-10 0/0:99:35:35:1291:0:0:0,-10,-10 0/0:87.8643:17:17:620:0:0:0,-5.11751,-10 0/0:99:30:30:1130:0:0:0,-9.0309,-10 0/0:81.8439:15:15:537:0:0:0,-4.51545,-10 0/0:51.741:5:5:190:0:0:0,-1.50515,-10 0/0:99:30:30:1125:0:0:0,-9.0309,-10 0/0:84.8542:16:16:602:0:0:0,-4.81648,-10 0/0:63.7822:9:9:336:0:0:0,-2.70927,-10 0/0:99:30:30:1103:0:0:0,-9.0309,-10 0/0:66.7925:10:10:376:0:0:0,-3.0103,-10 0/0:81.8439:15:15:552:0:0:0,-4.51545,-10 0/0:99:31:31:1132:0:0:0,-9.33193,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:66.7925:10:10:340:0:0:0,-3.0103,-10 0/1:99:20:11:406:9:329:-10,0,-10 0/0:69.8028:11:11:417:0:0:0,-3.31133,-10 0/0:75.8234:13:13:486:0:0:0,-3.91339,-10 0/0:69.8028:11:11:404:0:0:0,-3.31133,-10 0/0:45.7204:3:3:107:0:0:0,-0.90309,-9.98667 0/0:69.8028:11:11:417:0:0:0,-3.31133,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:93.884:19:19:721:0:0:0,-5.71957,-10 0/0:99:26:26:925:0:0:0,-7.82678,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:75.8234:13:13:488:0:0:0,-3.91339,-10 0/0:42.7101:2:2:73:0:0:0,-0.60206,-6.935 0/0:72.8131:12:12:451:0:0:0,-3.61236,-10 0/0:63.7822:9:9:336:0:0:0,-2.70927,-10 0/0:42.7101:2:2:52:0:0:0,-0.60206,-4.94 0/0:75.8234:13:13:494:0:0:0,-3.91339,-10 0/0:84.8542:16:16:607:0:0:0,-4.81648,-10 0/0:72.8131:12:12:420:0:0:0,-3.61236,-10 scaffold_259 360802 . G A 1047.89 . AB=0.506024;ABP=3.03646;AC=3;AF=0.0163043;AN=184;AO=44;CIGAR=1X;DP=1888;DPB=1888;DPRA=1.46916;EPP=22.751;EPPR=3.5299;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9387;NS=92;NUMALT=1;ODDS=2.54975;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1623;QR=67531;RO=1843;RPP=98.5551;RPPR=4005.03;RUN=1;SAF=32;SAP=22.751;SAR=12;SRF=932;SRP=3.5299;SRR=911;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.5641:16:16:578:0:0:0,-4.81648,-10 0/0:52.5332:13:13:456:0:0:0,-3.91339,-10 0/0:58.5538:15:15:566:0:0:0,-4.51545,-10 0/0:11.6662:17:16:584:1:38:0,-0.087061,-10 0/0:61.5641:16:16:577:0:0:0,-4.81648,-10 0/0:34.4714:7:7:257:0:0:0,-2.10721,-10 0/0:99:43:43:1579:0:0:0,-10,-10 0/0:55.5435:14:14:508:0:0:0,-4.21442,-10 0/0:58.5538:15:15:531:0:0:0,-4.51545,-10 0/0:25.4405:4:4:129:0:0:0,-1.20412,-10 0/0:46.5126:11:11:398:0:0:0,-3.31133,-10 0/0:16.4096:1:1:36:0:0:0,-0.30103,-3.6 0/0:99:31:31:1101:0:0:0,-9.33193,-10 0/0:99:33:33:1241:0:0:0,-9.93399,-10 0/0:99:31:31:1166:0:0:0,-9.33193,-10 0/0:91.6657:26:26:899:0:0:0,-7.82678,-10 0/0:99:32:32:1151:0:0:0,-9.63296,-10 0/0:31.4611:6:6:228:0:0:0,-1.80618,-10 0/0:64.5744:17:17:644:0:0:0,-5.11751,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:64.5744:17:17:637:0:0:0,-5.11751,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:49.5229:12:12:409:0:0:0,-3.61236,-10 0/0:85.6462:24:24:871:0:0:0,-7.22472,-10 0/0:73.6053:20:20:735:0:0:0,-6.0206,-10 0/0:70.595:19:19:663:0:0:0,-5.71957,-10 0/0:88.6561:25:25:941:0:0:0,-7.52575,-10 0/0:55.5435:14:14:518:0:0:0,-4.21442,-10 0/0:64.5744:17:17:637:0:0:0,-5.11751,-10 0/0:99:32:32:1190:0:0:0,-9.63296,-10 0/0:34.4714:7:7:263:0:0:0,-2.10721,-10 0/0:34.4714:7:7:261:0:0:0,-2.10721,-10 0/0:79.6259:22:22:795:0:0:0,-6.62266,-10 0/0:55.5435:14:14:491:0:0:0,-4.21442,-10 0/0:94.6745:27:27:977:0:0:0,-8.12781,-10 0/0:43.5023:10:10:374:0:0:0,-3.0103,-10 0/0:46.5126:11:11:393:0:0:0,-3.31133,-10 0/0:99:36:36:1252:0:0:0,-10,-10 0/0:67.5847:18:18:670:0:0:0,-5.41854,-10 0/0:70.595:19:19:694:0:0:0,-5.71957,-10 0/0:99:39:39:1473:0:0:0,-10,-10 0/0:73.6053:20:20:723:0:0:0,-6.0206,-10 0/0:64.5744:17:17:642:0:0:0,-5.11751,-10 0/0:70.595:19:19:699:0:0:0,-5.71957,-10 0/0:91.6657:26:26:985:0:0:0,-7.82678,-10 0/0:64.5744:17:17:615:0:0:0,-5.11751,-10 0/0:99:43:43:1548:0:0:0,-10,-10 0/0:99:35:35:1298:0:0:0,-10,-10 0/0:52.5332:13:13:491:0:0:0,-3.91339,-10 0/0:99:39:39:1385:0:0:0,-10,-10 0/0:58.5538:15:15:557:0:0:0,-4.51545,-10 0/0:99:40:40:1497:0:0:0,-10,-10 0/0:55.5435:14:14:506:0:0:0,-4.21442,-10 0/0:46.5126:11:11:418:0:0:0,-3.31133,-10 0/0:99:47:46:1684:1:16:0,-10,-10 0/0:61.5641:16:16:588:0:0:0,-4.81648,-10 0/0:85.6462:24:24:882:0:0:0,-7.22472,-10 0/0:34.4714:7:7:251:0:0:0,-2.10721,-10 0/0:52.5332:13:13:493:0:0:0,-3.91339,-10 0/0:52.5332:13:13:454:0:0:0,-3.91339,-10 0/0:99:39:39:1456:0:0:0,-10,-10 0/0:76.6156:21:21:786:0:0:0,-6.32163,-10 0/0:91.6657:26:26:964:0:0:0,-7.82678,-10 0/0:97.6819:28:28:1025:0:0:0,-8.42884,-10 0/0:67.5847:18:18:644:0:0:0,-5.41854,-10 0/0:99:41:41:1540:0:0:0,-10,-10 0/0:46.5126:11:11:418:0:0:0,-3.31133,-10 0/0:55.5435:14:14:522:0:0:0,-4.21442,-10 0/0:99:37:37:1386:0:0:0,-10,-10 0/0:52.5332:13:13:484:0:0:0,-3.91339,-10 0/0:70.595:19:19:714:0:0:0,-5.71957,-10 0/0:85.6462:24:24:904:0:0:0,-7.22472,-10 0/1:99:30:15:536:15:567:-10,0,-10 0/1:0.122215:14:0:0:14:528:-10,-4.21442,0 0/1:99:39:26:938:13:474:-10,0,-10 0/0:49.5229:12:12:425:0:0:0,-3.61236,-10 0/0:73.6053:20:20:721:0:0:0,-6.0206,-10 0/0:43.5023:10:10:336:0:0:0,-3.0103,-10 0/0:34.4714:7:7:240:0:0:0,-2.10721,-10 0/0:70.595:19:19:714:0:0:0,-5.71957,-10 0/0:99:36:36:1335:0:0:0,-10,-10 0/0:94.6745:27:27:984:0:0:0,-8.12781,-10 0/0:67.5847:18:18:653:0:0:0,-5.41854,-10 0/0:58.5538:15:15:538:0:0:0,-4.51545,-10 0/0:88.6561:25:25:912:0:0:0,-7.52575,-10 0/0:25.4405:4:4:150:0:0:0,-1.20412,-10 0/0:52.5332:13:13:462:0:0:0,-3.91339,-10 0/0:64.5744:17:17:625:0:0:0,-5.11751,-10 0/0:34.4714:7:7:266:0:0:0,-2.10721,-10 0/0:61.5641:16:16:596:0:0:0,-4.81648,-10 0/0:52.5332:13:13:493:0:0:0,-3.91339,-10 0/0:82.636:24:23:833:0:0:0,-6.92369,-10 scaffold_259 405276 . C T 170.27 . AB=0.470588;ABP=3.13803;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1543;DPB=1543;DPRA=0.721553;EPP=7.94546;EPPR=6.1434;GTI=1;LEN=1;MEANALT=1;MQM=58.2727;MQMR=59.9935;NS=92;NUMALT=1;ODDS=2.03646;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=359;QR=55696;RO=1531;RPP=26.8965;RPPR=3327.53;RUN=1;SAF=8;SAP=7.94546;SAR=3;SRF=789;SRP=6.1434;SRR=742;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:89.7168:17:17:610:0:0:0,-5.11751,-10 0/0:77.6766:13:13:483:0:0:0,-3.91339,-10 0/0:86.7075:16:16:602:0:0:0,-4.81648,-10 0/0:77.6766:13:13:491:0:0:0,-3.91339,-10 0/0:68.6457:10:10:375:0:0:0,-3.0103,-10 0/0:68.6457:10:10:367:0:0:0,-3.0103,-10 0/0:99:32:32:1204:0:0:0,-9.63296,-10 0/0:99:24:24:856:0:0:0,-7.22472,-10 0/0:71.656:11:11:387:0:0:0,-3.31133,-10 0/0:44.5633:2:2:76:0:0:0,-0.60206,-7.22 0/0:56.6045:6:6:216:0:0:0,-1.80618,-10 0/0:62.6251:8:8:262:0:0:0,-2.40824,-10 0/0:99:26:26:985:0:0:0,-7.82678,-10 0/0:99:21:21:795:0:0:0,-6.32163,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:99:23:23:828:0:0:0,-6.92369,-10 0/0:64.2275:17:16:577:1:16:0,-2.28706,-10 0/0:71.656:11:11:406:0:0:0,-3.31133,-10 0/0:99:21:21:760:0:0:0,-6.32163,-10 0/0:99:22:22:776:0:0:0,-6.62266,-10 0/0:80.6868:14:14:476:0:0:0,-4.21442,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:65.6354:9:9:316:0:0:0,-2.70927,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:98.7477:20:20:719:0:0:0,-6.0206,-10 0/0:80.6868:14:14:519:0:0:0,-4.21442,-10 0/0:71.656:11:11:387:0:0:0,-3.31133,-10 0/0:65.6354:9:9:293:0:0:0,-2.70927,-10 0/0:86.7075:16:16:557:0:0:0,-4.81648,-10 0/0:80.6868:14:14:498:0:0:0,-4.21442,-10 0/0:59.6148:7:7:233:0:0:0,-2.10721,-10 0/0:56.6045:6:6:228:0:0:0,-1.80618,-10 0/0:62.6251:8:8:304:0:0:0,-2.40824,-10 0/0:56.6045:6:6:224:0:0:0,-1.80618,-10 0/0:71.656:11:11:407:0:0:0,-3.31133,-10 0/0:59.6148:7:7:243:0:0:0,-2.10721,-10 0/0:77.6766:13:13:446:0:0:0,-3.91339,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:74.6663:12:12:443:0:0:0,-3.61236,-10 0/0:74.6663:12:12:406:0:0:0,-3.61236,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:95.7342:19:19:709:0:0:0,-5.71957,-10 0/0:89.7168:17:17:607:0:0:0,-5.11751,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:99:26:26:940:0:0:0,-7.82678,-10 0/0:89.7168:17:17:627:0:0:0,-5.11751,-10 0/0:99:37:37:1356:0:0:0,-10,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:50.0563:11:10:376:1:14:0,-0.869937,-10 0/0:99:24:24:883:0:0:0,-7.22472,-10 0/0:92.7279:18:18:656:0:0:0,-5.41854,-10 0/0:99:29:29:927:0:0:0,-8.72987,-10 0/0:53.5942:5:5:190:0:0:0,-1.50515,-10 0/0:53.5942:5:5:189:0:0:0,-1.50515,-10 0/0:99:33:33:1141:0:0:0,-9.93399,-10 0/0:80.6868:14:14:523:0:0:0,-4.21442,-10 0/0:74.6663:12:12:441:0:0:0,-3.61236,-10 0/0:53.5942:5:5:181:0:0:0,-1.50515,-10 0/0:83.697:15:15:555:0:0:0,-4.51545,-10 0/0:83.697:15:15:519:0:0:0,-4.51545,-10 0/0:99:27:27:954:0:0:0,-8.12781,-10 0/0:95.7342:19:19:690:0:0:0,-5.71957,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:92.7279:18:18:666:0:0:0,-5.41854,-10 0/0:74.6663:12:12:430:0:0:0,-3.61236,-10 0/0:99:23:23:840:0:0:0,-6.92369,-10 0/0:99:21:21:772:0:0:0,-6.32163,-10 0/0:62.6251:8:8:275:0:0:0,-2.40824,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:56.6045:6:6:228:0:0:0,-1.80618,-10 0/0:77.6766:13:13:484:0:0:0,-3.91339,-10 0/0:99:22:22:826:0:0:0,-6.62266,-10 0/0:99:22:22:761:0:0:0,-6.62266,-10 0/0:89.7168:17:17:604:0:0:0,-5.11751,-10 0/0:86.7075:16:16:608:0:0:0,-4.81648,-10 0/0:74.6663:12:12:453:0:0:0,-3.61236,-10 0/0:83.697:15:15:539:0:0:0,-4.51545,-10 0/0:68.6457:10:10:376:0:0:0,-3.0103,-10 0/0:56.6045:6:6:228:0:0:0,-1.80618,-10 0/0:77.6766:13:13:471:0:0:0,-3.91339,-10 0/0:99:33:32:1179:0:0:0,-9.63296,-10 0/0:99:28:28:1013:0:0:0,-8.42884,-10 0/0:92.7279:18:18:662:0:0:0,-5.41854,-10 0/0:83.697:15:15:564:0:0:0,-4.51545,-10 0/0:99:34:34:1282:0:0:0,-10,-10 0/0:41.553:1:1:38:0:0:0,-0.30103,-3.8 0/0:80.6868:14:14:463:0:0:0,-4.21442,-10 0/0:98.7477:20:20:738:0:0:0,-6.0206,-10 0/0:0.532587:4:3:112:1:38:-3.19794,0,-9.85127 0/0:71.656:11:11:412:0:0:0,-3.31133,-10 0/1:99:17:9:341:8:291:-10,0,-10 0/0:77.6766:13:13:468:0:0:0,-3.91339,-10 scaffold_259 405293 . C T 936.607 . AB=0.506667;ABP=3.03925;AC=4;AF=0.0217391;AN=184;AO=42;CIGAR=1X;DP=1543;DPB=1543;DPRA=1.29148;EPP=3.83753;EPPR=9.70423;GTI=1;LEN=1;MEANALT=1.125;MQM=59.8571;MQMR=59.9847;NS=92;NUMALT=1;ODDS=4.75794;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1455;QR=53988;RO=1500;RPP=94.2121;RPPR=3208.31;RUN=1;SAF=19;SAP=3.83753;SAR=23;SRF=778;SRP=7.55012;SRR=722;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.4453:17:17:625:0:0:0,-5.11751,-10 0/0:58.4041:13:13:465:0:0:0,-3.91339,-10 0/1:99:16:10:379:5:185:-10,0,-10 0/0:58.4041:13:13:469:0:0:0,-3.91339,-10 0/0:49.3732:10:10:348:0:0:0,-3.0103,-10 0/0:49.3732:10:10:369:0:0:0,-3.0103,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:91.5161:24:24:895:0:0:0,-7.22472,-10 0/0:52.3835:11:11:366:0:0:0,-3.31133,-10 0/0:25.2908:2:2:75:0:0:0,-0.60206,-7.125 0/0:37.332:6:6:223:0:0:0,-1.80618,-10 0/0:43.3526:8:8:278:0:0:0,-2.40824,-10 0/0:97.5329:26:26:983:0:0:0,-7.82678,-10 0/0:82.4863:21:21:761:0:0:0,-6.32163,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:88.5064:23:23:825:0:0:0,-6.92369,-10 0/0:70.4453:17:17:602:0:0:0,-5.11751,-10 0/0:52.3835:11:11:418:0:0:0,-3.31133,-10 0/0:82.4863:21:21:791:0:0:0,-6.32163,-10 0/0:85.4965:22:22:738:0:0:0,-6.62266,-10 0/0:61.4144:14:14:481:0:0:0,-4.21442,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:46.3629:9:9:338:0:0:0,-2.70927,-10 0/0:91.5161:24:24:862:0:0:0,-7.22472,-10 0/0:79.4761:20:20:754:0:0:0,-6.0206,-10 0/0:61.4144:14:14:524:0:0:0,-4.21442,-10 0/0:52.3835:11:11:383:0:0:0,-3.31133,-10 0/0:46.3629:9:9:315:0:0:0,-2.70927,-10 0/0:40.9091:16:15:540:1:16:0,-2.01236,-10 0/0:61.4144:14:14:507:0:0:0,-4.21442,-10 0/0:40.3423:7:7:239:0:0:0,-2.10721,-10 0/0:37.332:6:6:204:0:0:0,-1.80618,-10 0/0:43.3526:8:8:273:0:0:0,-2.40824,-10 0/0:37.332:6:6:228:0:0:0,-1.80618,-10 0/0:52.3835:11:11:393:0:0:0,-3.31133,-10 0/0:40.3423:7:7:238:0:0:0,-2.10721,-10 0/0:58.4041:13:13:460:0:0:0,-3.91339,-10 0/0:99:29:29:1023:0:0:0,-8.72987,-10 0/0:55.3938:12:12:439:0:0:0,-3.61236,-10 0/0:55.3938:12:12:397:0:0:0,-3.61236,-10 0/0:99:35:35:1251:0:0:0,-10,-10 0/0:49.1937:19:18:671:1:16:0,-2.84082,-10 0/0:70.4453:17:17:597:0:0:0,-5.11751,-10 0/0:94.5251:25:25:898:0:0:0,-7.52575,-10 0/0:71.5292:26:25:888:1:16:0,-4.81181,-10 0/0:70.4453:17:17:585:0:0:0,-5.11751,-10 0/0:99:37:37:1341:0:0:0,-10,-10 0/0:97.5329:26:26:968:0:0:0,-7.82678,-10 0/0:52.3835:11:11:398:0:0:0,-3.31133,-10 0/0:91.5161:24:24:877:0:0:0,-7.22472,-10 0/0:73.4556:18:18:659:0:0:0,-5.41854,-10 0/0:99:29:29:959:0:0:0,-8.72987,-10 0/0:34.3217:5:5:190:0:0:0,-1.50515,-10 0/0:34.3217:5:5:166:0:0:0,-1.50515,-10 0/0:88.9396:33:32:1160:1:16:0,-6.81548,-10 0/0:61.4144:14:14:508:0:0:0,-4.21442,-10 0/0:55.3938:12:12:436:0:0:0,-3.61236,-10 0/0:34.3217:5:5:177:0:0:0,-1.50515,-10 0/0:64.4247:15:15:564:0:0:0,-4.51545,-10 0/0:64.4247:15:15:548:0:0:0,-4.51545,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:76.4658:19:19:648:0:0:0,-5.71957,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/1:99:18:10:376:8:281:-10,0,-10 0/0:55.3938:12:12:443:0:0:0,-3.61236,-10 0/0:88.5064:23:23:827:0:0:0,-6.92369,-10 0/0:82.4863:21:21:715:0:0:0,-6.32163,-10 0/0:43.3526:8:8:279:0:0:0,-2.40824,-10 0/0:99:32:32:1165:0:0:0,-9.63296,-10 0/0:37.332:6:6:223:0:0:0,-1.80618,-10 0/0:58.4041:13:13:480:0:0:0,-3.91339,-10 0/0:85.4965:22:22:822:0:0:0,-6.62266,-10 0/0:85.4965:22:22:758:0:0:0,-6.62266,-10 0/0:70.4453:17:17:612:0:0:0,-5.11751,-10 0/0:67.435:16:16:574:0:0:0,-4.81648,-10 0/0:55.3938:12:12:414:0:0:0,-3.61236,-10 0/0:64.4247:15:15:546:0:0:0,-4.51545,-10 0/0:49.3732:10:10:314:0:0:0,-3.0103,-10 0/0:37.332:6:6:226:0:0:0,-1.80618,-10 0/1:0.0366626:13:0:0:13:491:-10,-3.91339,0 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/1:99:28:16:556:12:434:-10,0,-10 0/0:73.4556:18:18:645:0:0:0,-5.41854,-10 0/0:64.4247:15:15:556:0:0:0,-4.51545,-10 0/0:99:34:34:1269:0:0:0,-10,-10 0/0:22.2805:1:1:38:0:0:0,-0.30103,-3.8 0/0:61.4144:14:14:452:0:0:0,-4.21442,-10 0/0:79.4761:20:20:681:0:0:0,-6.0206,-10 0/0:31.3114:4:4:150:0:0:0,-1.20412,-10 0/0:52.3835:11:11:394:0:0:0,-3.31133,-10 0/0:70.4453:17:17:630:0:0:0,-5.11751,-10 0/0:58.4041:13:13:466:0:0:0,-3.91339,-10 scaffold_259 432284 . C A 606.938 . AB=0.4;ABP=8.22183;AC=2;AF=0.0108696;AN=184;AO=25;CIGAR=1X;DP=2256;DPB=2256;DPRA=1.04834;EPP=5.18177;EPPR=4.00742;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=25.357;NS=92;NUMALT=1;ODDS=11.2417;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=902;QR=80405;RO=2230;RPP=57.2971;RPPR=4845.39;RUN=1;SAF=10;SAP=5.18177;SAR=15;SRF=1131;SRP=4.00742;SRR=1099;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:22:22:804:0:0:0,-6.62266,-10 0/0:78.9253:15:15:553:0:0:0,-4.51545,-10 0/0:99:25:25:908:0:0:0,-7.52575,-10 0/0:66.8841:11:11:387:0:0:0,-3.31133,-10 0/0:78.9253:15:15:561:0:0:0,-4.51545,-10 0/0:57.8532:8:8:292:0:0:0,-2.40824,-10 0/0:99:64:64:2344:0:0:0,-10,-10 0/0:99:31:31:1118:0:0:0,-9.33193,-10 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:51.8326:6:6:223:0:0:0,-1.80618,-10 0/0:63.8738:10:10:362:0:0:0,-3.0103,-10 0/0:63.8738:10:10:314:0:0:0,-3.0103,-10 0/0:99:32:32:1133:0:0:0,-9.63296,-10 0/0:99:39:39:1382:0:0:0,-10,-10 0/0:99:43:43:1514:0:0:0,-10,-10 0/0:99:25:25:920:0:0:0,-7.52575,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:57.8532:8:8:280:0:0:0,-2.40824,-10 0/0:93.9754:20:20:676:0:0:0,-6.0206,-10 0/0:99:53:53:1914:0:0:0,-10,-10 0/0:99:29:29:991:0:0:0,-8.72987,-10 0/0:99:39:39:1473:0:0:0,-10,-10 0/0:51.8326:6:6:201:0:0:0,-1.80618,-10 0/0:99:28:28:967:0:0:0,-8.42884,-10 0/0:99:33:33:1219:0:0:0,-9.93399,-10 0/0:99:35:35:1240:0:0:0,-10,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:75.915:14:14:512:0:0:0,-4.21442,-10 0/0:72.9047:13:13:485:0:0:0,-3.91339,-10 0/0:99:36:36:1329:0:0:0,-10,-10 0/0:63.8738:11:10:366:0:0:0,-3.0103,-10 0/0:84.9457:17:17:607:0:0:0,-5.11751,-10 0/0:60.8635:9:9:329:0:0:0,-2.70927,-10 0/0:56.0384:17:16:530:1:16:0,-2.28706,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:48.8223:5:5:190:0:0:0,-1.50515,-10 0/0:99:24:24:902:0:0:0,-7.22472,-10 0/0:99:34:34:1186:0:0:0,-10,-10 0/0:96.9842:21:21:732:0:0:0,-6.32163,-10 0/0:93.9754:20:20:738:0:0:0,-6.0206,-10 0/0:99:52:52:1868:0:0:0,-10,-10 0/0:99:34:34:1185:0:0:0,-10,-10 0/0:99:25:25:893:0:0:0,-7.52575,-10 0/0:99:36:36:1267:0:0:0,-10,-10 0/0:99:25:25:920:0:0:0,-7.52575,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 0/0:99:60:60:2173:0:0:0,-10,-10 0/0:99:38:38:1359:0:0:0,-10,-10 0/0:96.9842:21:21:796:0:0:0,-6.32163,-10 0/0:99:37:37:1243:0:0:0,-10,-10 0/0:78.9253:15:15:546:0:0:0,-4.51545,-10 0/0:99:42:42:1518:0:0:0,-10,-10 0/0:90.9658:19:19:717:0:0:0,-5.71957,-10 0/0:54.8429:7:7:236:0:0:0,-2.10721,-10 0/0:99:43:43:1561:0:0:0,-10,-10 0/0:84.9457:17:17:613:0:0:0,-5.11751,-10 0/0:60.8635:9:9:312:0:0:0,-2.70927,-10 0/0:57.8532:8:8:304:0:0:0,-2.40824,-10 0/0:99:27:27:971:0:0:0,-8.12781,-10 0/0:66.8841:11:11:414:0:0:0,-3.31133,-10 0/0:99:42:42:1507:0:0:0,-10,-10 0/0:99:25:25:904:0:0:0,-7.52575,-10 0/0:99:63:63:2180:0:0:0,-10,-10 0/0:99:23:23:759:0:0:0,-6.92369,-10 0/0:66.8841:11:11:402:0:0:0,-3.31133,-10 0/0:99:31:31:1147:0:0:0,-9.33193,-10 0/0:87.9559:18:18:669:0:0:0,-5.41854,-10 0/0:63.8738:10:10:354:0:0:0,-3.0103,-10 0/0:99:49:49:1797:0:0:0,-10,-10 0/0:57.8532:8:8:269:0:0:0,-2.40824,-10 0/1:99:25:13:470:12:443:-10,0,-10 0/1:99:35:23:808:12:443:-10,0,-10 0/0:99:24:24:874:0:0:0,-7.22472,-10 0/0:99:22:22:800:0:0:0,-6.62266,-10 0/0:99:39:39:1369:0:0:0,-10,-10 0/0:72.9047:13:13:480:0:0:0,-3.91339,-10 0/0:66.8841:11:11:410:0:0:0,-3.31133,-10 0/0:96.9842:21:21:777:0:0:0,-6.32163,-10 0/0:57.8532:8:8:292:0:0:0,-2.40824,-10 0/0:60.8635:9:9:310:0:0:0,-2.70927,-10 0/0:99:44:44:1609:0:0:0,-10,-10 0/0:99:32:32:1152:0:0:0,-9.63296,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:93.9754:20:20:712:0:0:0,-6.0206,-10 0/0:72.9047:13:13:444:0:0:0,-3.91339,-10 0/0:93.9754:20:20:748:0:0:0,-6.0206,-10 0/0:81.9355:16:16:589:0:0:0,-4.81648,-10 0/0:51.8326:6:6:219:0:0:0,-1.80618,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:99:28:28:1039:0:0:0,-8.42884,-10 scaffold_259 432307 . T C 179.189 . AB=0.25;ABP=22.5536;AC=1;AF=0.00543478;AN=184;AO=15;CIGAR=1X;DP=2281;DPB=2281;DPRA=1.3474;EPP=3.15506;EPPR=6.93543;GTI=0;LEN=1;MEANALT=1;MQM=23.2667;MQMR=25.8623;NS=92;NUMALT=1;ODDS=12.9693;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=555;QR=83481;RO=2266;RPP=35.5824;RPPR=4632.68;RUN=1;SAF=7;SAP=3.15506;SAR=8;SRF=1135;SRP=3.02563;SRR=1131;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:22:22:796:0:0:0,-6.62266,-10 0/0:97.643:15:15:565:0:0:0,-4.51545,-10 0/0:99:25:25:919:0:0:0,-7.52575,-10 0/0:91.6221:13:13:487:0:0:0,-3.91339,-10 0/0:97.643:15:15:538:0:0:0,-4.51545,-10 0/0:82.5927:10:10:379:0:0:0,-3.0103,-10 0/0:99:66:66:2438:0:0:0,-10,-10 0/0:99:31:31:1165:0:0:0,-9.33193,-10 0/0:99:23:23:841:0:0:0,-6.92369,-10 0/0:70.5518:6:6:228:0:0:0,-1.80618,-10 0/0:82.5927:10:10:374:0:0:0,-3.0103,-10 0/0:82.5927:10:10:378:0:0:0,-3.0103,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:99:39:39:1423:0:0:0,-10,-10 0/0:99:44:44:1603:0:0:0,-10,-10 0/0:99:25:25:907:0:0:0,-7.52575,-10 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:79.5826:9:9:340:0:0:0,-2.70927,-10 0/0:99:20:20:747:0:0:0,-6.0206,-10 0/0:99:53:53:1963:0:0:0,-10,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/0:99:40:40:1516:0:0:0,-10,-10 0/0:70.5518:6:6:216:0:0:0,-1.80618,-10 0/0:99:28:28:995:0:0:0,-8.42884,-10 0/0:99:34:34:1252:0:0:0,-10,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:99:24:24:904:0:0:0,-7.22472,-10 0/0:94.6306:14:14:523:0:0:0,-4.21442,-10 0/0:91.6221:13:13:468:0:0:0,-3.91339,-10 0/0:99:36:36:1345:0:0:0,-10,-10 0/0:88.6127:12:12:431:0:0:0,-3.61236,-10 0/0:57.5194:17:16:607:1:37:0,-0.187061,-10 0/0:79.5826:9:9:336:0:0:0,-2.70927,-10 0/0:99:17:17:607:0:0:0,-5.11751,-10 0/0:99:28:28:1054:0:0:0,-8.42884,-10 0/0:67.5415:5:5:190:0:0:0,-1.50515,-10 0/0:67.5745:24:23:864:1:38:0,-2.04451,-10 0/0:99:34:34:1258:0:0:0,-10,-10 0/0:99:21:21:759:0:0:0,-6.32163,-10 0/0:56.3252:20:19:713:1:38:0,-0.91957,-10 0/0:99:53:53:1975:0:0:0,-10,-10 0/0:99:35:35:1268:0:0:0,-10,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/1:99:36:27:1001:9:342:-10,0,-10 0/0:99:25:25:943:0:0:0,-7.52575,-10 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:99:61:61:2228:0:0:0,-10,-10 0/0:99:38:38:1415:0:0:0,-10,-10 0/0:99:21:21:794:0:0:0,-6.32163,-10 0/0:99:38:38:1307:0:0:0,-10,-10 0/0:97.643:15:15:555:0:0:0,-4.51545,-10 0/0:99:44:44:1597:0:0:0,-10,-10 0/0:99:19:19:696:0:0:0,-5.71957,-10 0/0:73.5621:7:7:230:0:0:0,-2.10721,-10 0/0:99:43:43:1585:0:0:0,-10,-10 0/0:99:17:17:614:0:0:0,-5.11751,-10 0/0:79.5826:9:9:341:0:0:0,-2.70927,-10 0/0:76.5724:8:8:301:0:0:0,-2.40824,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:85.6028:11:11:396:0:0:0,-3.31133,-10 0/0:99:42:42:1526:0:0:0,-10,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:99:64:62:2279:2:62:0,-10,-10 0/0:99:23:23:817:0:0:0,-6.92369,-10 0/0:85.6028:11:11:396:0:0:0,-3.31133,-10 0/0:99:31:31:1107:0:0:0,-9.33193,-10 0/0:99:18:18:661:0:0:0,-5.41854,-10 0/0:82.5927:10:10:369:0:0:0,-3.0103,-10 0/0:99:50:50:1837:0:0:0,-10,-10 0/0:76.5724:8:8:278:0:0:0,-2.40824,-10 0/0:99:26:26:981:0:0:0,-7.82678,-10 0/0:99:35:34:1245:1:38:0,-5.19198,-10 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:99:22:22:831:0:0:0,-6.62266,-10 0/0:99:39:39:1392:0:0:0,-10,-10 0/0:94.6306:14:14:529:0:0:0,-4.21442,-10 0/0:85.6028:11:11:416:0:0:0,-3.31133,-10 0/0:99:21:21:791:0:0:0,-6.32163,-10 0/0:76.5724:8:8:300:0:0:0,-2.40824,-10 0/0:79.5826:9:9:337:0:0:0,-2.70927,-10 0/0:99:44:44:1635:0:0:0,-10,-10 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:99:26:26:980:0:0:0,-7.82678,-10 0/0:99:20:20:703:0:0:0,-6.0206,-10 0/0:91.6221:13:13:461:0:0:0,-3.91339,-10 0/0:99:20:20:756:0:0:0,-6.0206,-10 0/0:99:16:16:576:0:0:0,-4.81648,-10 0/0:70.5518:6:6:224:0:0:0,-1.80618,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:99:24:24:892:0:0:0,-7.22472,-10 0/0:99:28:28:1060:0:0:0,-8.42884,-10 scaffold_259 432310 . C T 465.237 . AB=0.444444;ABP=4.21667;AC=2;AF=0.0108696;AN=184;AO=23;CIGAR=1X;DP=2280;DPB=2280;DPRA=1.17303;EPP=52.9542;EPPR=4904.02;GTI=0;LEN=1;MEANALT=1;MQM=22.913;MQMR=25.8693;NS=92;NUMALT=1;ODDS=13.0123;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=763;QR=82661;RO=2257;RPP=5.3706;RPPR=3.01896;RUN=1;SAF=14;SAP=5.3706;SAR=9;SRF=1127;SRP=3.01896;SRR=1130;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:22:22:791:0:0:0,-6.62266,-10 0/0:86.6142:15:15:561:0:0:0,-4.51545,-10 0/0:99:25:25:931:0:0:0,-7.52575,-10 0/0:80.5942:13:13:465:0:0:0,-3.91339,-10 0/0:86.6142:15:15:494:0:0:0,-4.51545,-10 0/0:71.5633:10:10:364:0:0:0,-3.0103,-10 0/0:99:65:65:2376:0:0:0,-10,-10 0/0:99:31:31:1122:0:0:0,-9.33193,-10 0/0:99:23:23:831:0:0:0,-6.92369,-10 0/0:59.5221:6:6:228:0:0:0,-1.80618,-10 0/0:71.5633:10:10:369:0:0:0,-3.0103,-10 0/0:71.5633:10:10:340:0:0:0,-3.0103,-10 0/0:99:32:32:1193:0:0:0,-9.63296,-10 0/0:99:39:39:1404:0:0:0,-10,-10 0/0:99:44:44:1585:0:0:0,-10,-10 0/0:99:25:25:919:0:0:0,-7.52575,-10 0/0:99:32:31:1155:1:16:0,-6.52781,-10 0/0:68.553:9:9:340:0:0:0,-2.70927,-10 0/0:99:20:20:729:0:0:0,-6.0206,-10 0/0:99:53:53:1950:0:0:0,-10,-10 0/0:99:29:29:1068:0:0:0,-8.72987,-10 0/0:99:40:40:1444:0:0:0,-10,-10 0/0:59.5221:6:6:202:0:0:0,-1.80618,-10 0/0:99:28:28:989:0:0:0,-8.42884,-10 0/0:99:34:34:1249:0:0:0,-10,-10 0/0:99:35:35:1275:0:0:0,-10,-10 0/0:99:24:24:908:0:0:0,-7.22472,-10 0/0:83.6044:14:14:532:0:0:0,-4.21442,-10 0/0:80.5942:13:13:491:0:0:0,-3.91339,-10 0/0:99:36:36:1302:0:0:0,-10,-10 0/0:77.5839:12:12:432:0:0:0,-3.61236,-10 0/0:92.6347:17:17:644:0:0:0,-5.11751,-10 0/0:68.553:9:9:340:0:0:0,-2.70927,-10 0/0:92.6347:17:17:609:0:0:0,-5.11751,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:56.5118:5:5:188:0:0:0,-1.50515,-10 0/0:99:24:24:898:0:0:0,-7.22472,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:99:21:21:760:0:0:0,-6.32163,-10 0/0:99:20:20:725:0:0:0,-6.0206,-10 0/0:99:53:53:1952:0:0:0,-10,-10 0/0:99:35:35:1282:0:0:0,-10,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:99:36:36:1343:0:0:0,-10,-10 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:99:61:61:2230:0:0:0,-10,-10 0/0:99:38:38:1370:0:0:0,-10,-10 0/0:99:21:21:790:0:0:0,-6.32163,-10 0/0:99:38:38:1351:0:0:0,-10,-10 0/0:86.6142:15:15:570:0:0:0,-4.51545,-10 0/0:99:44:43:1526:1:15:0,-10,-10 0/0:98.6531:19:19:705:0:0:0,-5.71957,-10 0/0:62.5324:7:7:230:0:0:0,-2.10721,-10 0/0:99:43:43:1595:0:0:0,-10,-10 0/0:92.6347:17:17:616:0:0:0,-5.11751,-10 0/0:68.553:9:9:337:0:0:0,-2.70927,-10 0/0:65.5427:8:8:303:0:0:0,-2.40824,-10 0/1:99:27:11:414:16:564:-10,0,-10 0/0:74.5736:11:11:408:0:0:0,-3.31133,-10 0/0:99:42:42:1458:0:0:0,-10,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:99:64:64:2321:0:0:0,-10,-10 0/0:82.7736:23:22:761:1:16:0,-3.96196,-10 0/0:74.5736:11:11:416:0:0:0,-3.31133,-10 0/0:99:31:31:1168:0:0:0,-9.33193,-10 0/1:82.3566:18:14:513:4:152:-10,0,-10 0/0:71.5633:10:10:348:0:0:0,-3.0103,-10 0/0:99:50:50:1830:0:0:0,-10,-10 0/0:65.5427:8:8:286:0:0:0,-2.40824,-10 0/0:99:26:26:951:0:0:0,-7.82678,-10 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:99:25:25:922:0:0:0,-7.52575,-10 0/0:99:22:22:826:0:0:0,-6.62266,-10 0/0:99:39:39:1451:0:0:0,-10,-10 0/0:83.6044:14:14:515:0:0:0,-4.21442,-10 0/0:74.5736:11:11:409:0:0:0,-3.31133,-10 0/0:99:21:21:787:0:0:0,-6.32163,-10 0/0:65.5427:8:8:297:0:0:0,-2.40824,-10 0/0:68.553:9:9:312:0:0:0,-2.70927,-10 0/0:99:44:44:1600:0:0:0,-10,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:99:26:26:957:0:0:0,-7.82678,-10 0/0:99:20:20:734:0:0:0,-6.0206,-10 0/0:80.5942:13:13:441:0:0:0,-3.91339,-10 0/0:99:20:20:758:0:0:0,-6.0206,-10 0/0:89.6248:16:16:599:0:0:0,-4.81648,-10 0/0:59.5221:6:6:226:0:0:0,-1.80618,-10 0/0:99:28:28:1052:0:0:0,-8.42884,-10 0/0:99:24:24:902:0:0:0,-7.22472,-10 0/0:99:28:28:1061:0:0:0,-8.42884,-10 scaffold_259 432337 . A G 453.461 . AB=0.404255;ABP=6.75262;AC=2;AF=0.0108696;AN=184;AO=20;CIGAR=1X;DP=2249;DPB=2249;DPRA=1.1226;EPP=3.44459;EPPR=3.94734;GTI=0;LEN=1;MEANALT=1;MQM=44.75;MQMR=25.6322;NS=92;NUMALT=1;ODDS=13.2525;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=742;QR=81097;RO=2227;RPP=46.4397;RPPR=4838.88;RUN=1;SAF=9;SAP=3.44459;SAR=11;SRF=1098;SRP=3.94734;SRR=1129;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:99:22:9:339:13:479:-10,0,-10 0/0:87.6578:15:15:554:0:0:0,-4.51545,-10 0/1:99:25:19:681:6:225:-10,0,-10 0/0:84.6475:14:14:508:0:0:0,-4.21442,-10 0/0:87.6578:15:15:508:0:0:0,-4.51545,-10 0/0:72.6064:10:10:354:0:0:0,-3.0103,-10 0/0:99:63:63:2317:0:0:0,-10,-10 0/0:99:31:31:1104:0:0:0,-9.33193,-10 0/0:99:23:23:821:0:0:0,-6.92369,-10 0/0:60.5652:6:6:228:0:0:0,-1.80618,-10 0/0:72.6064:10:10:370:0:0:0,-3.0103,-10 0/0:72.6064:10:10:372:0:0:0,-3.0103,-10 0/0:99:30:30:1065:0:0:0,-9.0309,-10 0/0:99:38:38:1367:0:0:0,-10,-10 0/0:99:43:43:1502:0:0:0,-10,-10 0/0:99:25:25:938:0:0:0,-7.52575,-10 0/0:99:32:32:1187:0:0:0,-9.63296,-10 0/0:69.5961:9:9:338:0:0:0,-2.70927,-10 0/0:99:20:20:714:0:0:0,-6.0206,-10 0/0:99:53:53:1957:0:0:0,-10,-10 0/0:99:29:29:1048:0:0:0,-8.72987,-10 0/0:99:40:40:1446:0:0:0,-10,-10 0/0:57.5549:5:5:177:0:0:0,-1.50515,-10 0/0:99:28:28:950:0:0:0,-8.42884,-10 0/0:99:34:34:1274:0:0:0,-10,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:99:21:21:768:0:0:0,-6.32163,-10 0/0:84.6475:14:14:529:0:0:0,-4.21442,-10 0/0:81.6373:13:13:476:0:0:0,-3.91339,-10 0/0:99:36:36:1348:0:0:0,-10,-10 0/0:78.627:12:12:424:0:0:0,-3.61236,-10 0/0:93.678:17:17:618:0:0:0,-5.11751,-10 0/0:69.5961:9:9:340:0:0:0,-2.70927,-10 0/0:93.678:17:17:603:0:0:0,-5.11751,-10 0/0:99:28:28:1060:0:0:0,-8.42884,-10 0/0:57.5549:5:5:189:0:0:0,-1.50515,-10 0/0:99:24:24:900:0:0:0,-7.22472,-10 0/0:99:34:34:1195:0:0:0,-10,-10 0/0:99:21:21:781:0:0:0,-6.32163,-10 0/0:99:20:20:710:0:0:0,-6.0206,-10 0/0:99:53:53:1910:0:0:0,-10,-10 0/0:99:35:35:1241:0:0:0,-10,-10 0/0:99:24:24:872:0:0:0,-7.22472,-10 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:99:25:25:893:0:0:0,-7.52575,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:99:60:60:2157:0:0:0,-10,-10 0/0:99:38:38:1393:0:0:0,-10,-10 0/0:99:21:21:759:0:0:0,-6.32163,-10 0/0:99:38:38:1339:0:0:0,-10,-10 0/0:87.6578:15:15:556:0:0:0,-4.51545,-10 0/0:99:43:43:1575:0:0:0,-10,-10 0/0:96.6879:18:18:680:0:0:0,-5.41854,-10 0/0:60.5652:6:6:228:0:0:0,-1.80618,-10 0/0:99:41:41:1440:0:0:0,-10,-10 0/0:87.6578:16:15:536:0:0:0,-4.51545,-10 0/0:69.5961:9:9:322:0:0:0,-2.70927,-10 0/0:66.5858:8:8:303:0:0:0,-2.40824,-10 0/0:99:26:26:973:0:0:0,-7.82678,-10 0/0:72.6064:10:10:375:0:0:0,-3.0103,-10 0/0:99:42:42:1450:0:0:0,-10,-10 0/0:99:25:24:888:0:0:0,-7.22472,-10 0/0:99:63:63:2296:0:0:0,-10,-10 0/0:99:21:21:716:0:0:0,-6.32163,-10 0/0:75.6167:11:11:417:0:0:0,-3.31133,-10 0/0:99:31:31:1166:0:0:0,-9.33193,-10 0/0:96.6879:18:18:609:0:0:0,-5.41854,-10 0/0:72.6064:10:10:367:0:0:0,-3.0103,-10 0/0:99:48:48:1774:0:0:0,-10,-10 0/0:66.5858:8:8:274:0:0:0,-2.40824,-10 0/0:99:26:26:959:0:0:0,-7.82678,-10 0/0:93.8891:35:34:1236:1:38:0,-5.19198,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:99:39:39:1448:0:0:0,-10,-10 0/0:84.6475:14:14:507:0:0:0,-4.21442,-10 0/0:75.6167:11:11:407:0:0:0,-3.31133,-10 0/0:99:21:21:784:0:0:0,-6.32163,-10 0/0:66.5858:8:8:278:0:0:0,-2.40824,-10 0/0:66.5858:8:8:280:0:0:0,-2.40824,-10 0/0:99:43:43:1543:0:0:0,-10,-10 0/0:99:31:31:1150:0:0:0,-9.33193,-10 0/0:99:28:28:1022:0:0:0,-8.42884,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:99:20:20:745:0:0:0,-6.0206,-10 0/0:81.6373:13:13:488:0:0:0,-3.91339,-10 0/0:99:20:20:751:0:0:0,-6.0206,-10 0/0:90.668:16:16:597:0:0:0,-4.81648,-10 0/0:60.5652:6:6:205:0:0:0,-1.80618,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:99:24:24:888:0:0:0,-7.22472,-10 0/0:99:28:28:1055:0:0:0,-8.42884,-10 scaffold_259 437194 . A T 384.232 . AB=0.473684;ABP=3.23888;AC=2;AF=0.0108696;AN=184;AO=18;CIGAR=1X;DP=2082;DPB=2082;DPRA=0.836595;EPP=3.49285;EPPR=15.516;GTI=0;LEN=1;MEANALT=1;MQM=58.8889;MQMR=59.9869;NS=92;NUMALT=1;ODDS=9.98179;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=619;QR=75578;RO=2063;RPP=42.0968;RPPR=4465.4;RUN=1;SAF=10;SAP=3.49285;SAR=8;SRF=1084;SRP=14.615;SRR=979;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:20:20:724:0:0:0,-6.0206,-10 0/0:67.4331:9:9:337:0:0:0,-2.70927,-10 0/0:99:22:22:773:0:0:0,-6.62266,-10 0/0:94.5234:18:18:634:0:0:0,-5.41854,-10 0/0:82.4845:14:14:519:0:0:0,-4.21442,-10 0/0:64.4229:8:8:272:0:0:0,-2.40824,-10 0/0:99:41:41:1482:0:0:0,-10,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:94.5234:18:18:672:0:0:0,-5.41854,-10 0/0:61.4126:7:7:265:0:0:0,-2.10721,-10 0/0:49.3714:3:3:114:0:0:0,-0.90309,-10 0/0:73.4538:11:11:411:0:0:0,-3.31133,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:99:32:32:1205:0:0:0,-9.63296,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:99:37:37:1382:0:0:0,-10,-10 0/0:99:27:27:1004:0:0:0,-8.12781,-10 0/0:52.3817:4:4:152:0:0:0,-1.20412,-10 0/0:99:32:32:1197:0:0:0,-9.63296,-10 0/0:99:40:40:1461:0:0:0,-10,-10 0/0:91.5143:17:17:640:0:0:0,-5.11751,-10 0/0:99:30:30:1130:0:0:0,-9.0309,-10 0/0:64.4229:8:8:301:0:0:0,-2.40824,-10 0/1:99:23:16:604:7:224:-10,0,-10 0/0:99:21:21:793:0:0:0,-6.32163,-10 0/0:99:20:20:707:0:0:0,-6.0206,-10 0/0:67.4331:9:9:318:0:0:0,-2.70927,-10 0/0:97.5312:19:19:705:0:0:0,-5.71957,-10 0/0:88.5053:16:16:582:0:0:0,-4.81648,-10 0/0:99:31:31:1112:0:0:0,-9.33193,-10 0/0:58.4023:6:6:228:0:0:0,-1.80618,-10 0/0:73.4538:11:11:404:0:0:0,-3.31133,-10 0/0:99:22:22:792:0:0:0,-6.62266,-10 0/0:91.5143:17:17:637:0:0:0,-5.11751,-10 0/0:97.5312:19:19:720:0:0:0,-5.71957,-10 0/0:55.392:5:5:190:0:0:0,-1.50515,-10 0/0:52.3817:4:4:148:0:0:0,-1.20412,-10 0/0:99:38:38:1382:0:0:0,-10,-10 0/0:99:24:24:892:0:0:0,-7.22472,-10 0/0:82.4845:14:14:528:0:0:0,-4.21442,-10 0/0:99:30:30:1137:0:0:0,-9.0309,-10 0/0:99:26:26:939:0:0:0,-7.82678,-10 0/0:99:21:21:785:0:0:0,-6.32163,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:99:42:42:1481:0:0:0,-10,-10 0/0:99:26:26:961:0:0:0,-7.82678,-10 0/0:99:51:51:1872:0:0:0,-10,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:99:34:34:1180:0:0:0,-10,-10 0/0:88.5053:16:16:578:0:0:0,-4.81648,-10 0/0:99:34:34:1225:0:0:0,-10,-10 0/0:70.4434:10:10:339:0:0:0,-3.0103,-10 0/0:64.4229:8:8:274:0:0:0,-2.40824,-10 0/0:99:44:44:1603:0:0:0,-10,-10 0/0:99:28:28:1040:0:0:0,-8.42884,-10 0/0:99:27:27:968:0:0:0,-8.12781,-10 0/0:52.3817:4:4:152:0:0:0,-1.20412,-10 0/0:99:28:28:1038:0:0:0,-8.42884,-10 0/0:64.4229:8:8:298:0:0:0,-2.40824,-10 0/0:99:38:38:1394:0:0:0,-10,-10 0/0:97.5312:19:19:721:0:0:0,-5.71957,-10 0/0:99:61:61:2233:0:0:0,-10,-10 0/1:99:15:4:152:11:395:-10,0,-10 0/0:99:25:25:920:0:0:0,-7.52575,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:99:20:20:721:0:0:0,-6.0206,-10 0/0:70.4434:10:10:376:0:0:0,-3.0103,-10 0/0:99:51:51:1855:0:0:0,-10,-10 0/0:82.4845:14:14:513:0:0:0,-4.21442,-10 0/0:99:22:22:813:0:0:0,-6.62266,-10 0/0:99:51:51:1871:0:0:0,-10,-10 0/0:91.5143:17:17:624:0:0:0,-5.11751,-10 0/0:99:24:24:851:0:0:0,-7.22472,-10 0/0:99:33:33:1143:0:0:0,-9.93399,-10 0/0:73.4538:11:11:416:0:0:0,-3.31133,-10 0/0:99:21:21:771:0:0:0,-6.32163,-10 0/0:85.495:15:15:533:0:0:0,-4.51545,-10 0/0:67.4331:9:9:341:0:0:0,-2.70927,-10 0/0:99:21:21:725:0:0:0,-6.32163,-10 0/0:99:36:36:1323:0:0:0,-10,-10 0/0:99:25:25:894:0:0:0,-7.52575,-10 0/0:99:30:30:1117:0:0:0,-9.0309,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:99:39:39:1434:0:0:0,-10,-10 0/0:43.3508:1:1:38:0:0:0,-0.30103,-3.8 0/0:99:23:23:838:0:0:0,-6.92369,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:52.3817:4:4:146:0:0:0,-1.20412,-10 0/0:99:20:20:721:0:0:0,-6.0206,-10 0/0:91.5143:18:17:617:0:0:0,-5.11751,-10 0/0:91.5143:17:17:646:0:0:0,-5.11751,-10 scaffold_259 437199 . C T 61423.3 . AB=0.517241;ABP=3.16006;AC=181;AF=0.983696;AN=184;AO=2052;CIGAR=1X;DP=2082;DPB=2082;DPRA=0;EPP=14.9005;EPPR=3.29983;GTI=0;LEN=1;MEANALT=1;MQM=59.9946;MQMR=58.8;NS=92;NUMALT=1;ODDS=8.82742;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=75000;QR=1040;RO=30;RPP=4450.19;RPPR=68.1545;RUN=1;SAF=1080;SAP=15.3534;SAR=972;SRF=14;SRP=3.29983;SRR=16;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:95.5347:20:0:0:20:718:-10,-6.0206,0 1/1:62.4207:9:0:0:9:339:-10,-2.70927,0 1/1:99:22:0:0:22:796:-10,-6.62266,0 1/1:89.5127:18:0:0:18:681:-10,-5.41854,0 1/1:77.4721:14:0:0:14:531:-10,-4.21442,0 1/1:59.4104:8:0:0:8:291:-10,-2.40824,0 1/1:99:41:0:0:41:1497:-10,-10,0 1/1:99:23:0:0:23:874:-10,-6.92369,0 1/1:89.5127:18:0:0:18:638:-10,-5.41854,0 1/1:56.4001:7:0:0:7:259:-10,-2.10721,0 1/1:44.3589:3:0:0:3:112:-10,-0.90309,0 1/1:68.4412:11:0:0:11:417:-10,-3.31133,0 1/1:99:31:0:0:31:1129:-10,-9.33193,0 1/1:99:32:0:0:32:1174:-10,-9.63296,0 1/1:99:27:0:0:27:1005:-10,-8.12781,0 1/1:99:37:0:0:37:1400:-10,-10,0 1/1:99:27:0:0:27:985:-10,-8.12781,0 1/1:47.3692:4:0:0:4:151:-10,-1.20412,0 1/1:99:32:0:0:32:1180:-10,-9.63296,0 1/1:99:40:0:0:40:1451:-10,-10,0 1/1:86.5027:17:0:0:17:615:-10,-5.11751,0 1/1:99:30:0:0:30:1103:-10,-9.0309,0 1/1:59.4104:8:0:0:8:303:-10,-2.40824,0 0/1:99:23:7:198:16:592:-10,0,-10 1/1:98.5458:21:0:0:21:764:-10,-6.32163,0 1/1:95.5347:20:0:0:20:705:-10,-6.0206,0 1/1:62.4207:9:0:0:9:324:-10,-2.70927,0 1/1:92.524:19:0:0:19:685:-10,-5.71957,0 1/1:83.4926:16:0:0:16:607:-10,-4.81648,0 1/1:75.8643:31:1:38:30:1109:-10,-4.04057,0 1/1:53.3898:6:0:0:6:228:-10,-1.80618,0 1/1:68.4412:11:0:0:11:416:-10,-3.31133,0 1/1:99:22:0:0:22:795:-10,-6.62266,0 1/1:86.5027:17:0:0:17:646:-10,-5.11751,0 1/1:92.524:19:0:0:19:720:-10,-5.71957,0 1/1:50.3795:5:0:0:5:190:-10,-1.50515,0 1/1:47.3692:4:0:0:4:130:-10,-1.20412,0 1/1:99:38:0:0:38:1384:-10,-10,0 1/1:99:24:0:0:24:890:-10,-7.22472,0 1/1:77.4721:14:0:0:14:532:-10,-4.21442,0 1/1:99:30:0:0:30:1139:-10,-9.0309,0 1/1:99:26:0:0:26:950:-10,-7.82678,0 1/1:98.5458:21:0:0:21:764:-10,-6.32163,0 1/1:99:32:0:0:32:1168:-10,-9.63296,0 1/1:99:42:0:0:42:1530:-10,-10,0 1/1:99:26:0:0:26:960:-10,-7.82678,0 1/1:99:51:0:0:51:1859:-10,-10,0 1/1:99:35:0:0:35:1267:-10,-10,0 1/1:99:26:0:0:26:947:-10,-7.82678,0 1/1:99:34:0:0:34:1199:-10,-10,0 1/1:83.4926:16:0:0:16:537:-10,-4.81648,0 1/1:99:34:0:0:34:1214:-10,-10,0 1/1:65.431:10:0:0:10:352:-10,-3.0103,0 1/1:59.4104:8:0:0:8:290:-10,-2.40824,0 1/1:99:44:0:0:44:1601:-10,-10,0 1/1:99:28:0:0:28:1039:-10,-8.42884,0 1/1:99:27:0:0:27:1000:-10,-8.12781,0 1/1:47.3692:4:0:0:4:152:-10,-1.20412,0 1/1:99:28:0:0:28:1006:-10,-8.42884,0 1/1:59.4104:8:0:0:8:291:-10,-2.40824,0 1/1:99:38:0:0:38:1391:-10,-10,0 1/1:92.524:19:0:0:19:716:-10,-5.71957,0 1/1:99:61:0:0:61:2257:-10,-10,0 0/1:99:15:11:403:4:152:-10,0,-10 1/1:99:25:0:0:25:904:-10,-7.52575,0 1/1:99:35:0:0:35:1317:-10,-10,0 0/1:99:20:10:365:10:375:-10,0,-10 1/1:65.431:10:0:0:10:371:-10,-3.0103,0 1/1:99:51:0:0:51:1825:-10,-10,0 1/1:77.4721:14:0:0:14:503:-10,-4.21442,0 1/1:99:22:0:0:22:778:-10,-6.62266,0 1/1:99:51:0:0:51:1833:-10,-10,0 1/1:86.5027:17:0:0:17:609:-10,-5.11751,0 1/1:99:24:0:0:24:873:-10,-7.22472,0 1/1:99:33:0:0:33:1140:-10,-9.93399,0 1/1:68.4412:11:0:0:11:406:-10,-3.31133,0 1/1:98.5458:21:0:0:21:789:-10,-6.32163,0 1/1:80.4824:15:0:0:15:568:-10,-4.51545,0 1/1:62.4207:9:0:0:9:336:-10,-2.70927,0 1/1:49.4527:21:1:36:20:693:-10,-1.39941,0 1/1:99:36:0:0:36:1276:-10,-10,0 1/1:99:25:0:0:25:921:-10,-7.52575,0 1/1:99:30:0:0:30:1094:-10,-9.0309,0 1/1:99:26:0:0:26:942:-10,-7.82678,0 1/1:99:39:0:0:39:1391:-10,-10,0 1/1:38.3383:1:0:0:1:38:-3.8,-0.30103,0 1/1:99:23:0:0:23:825:-10,-6.92369,0 1/1:99:23:0:0:23:847:-10,-6.92369,0 1/1:47.3692:4:0:0:4:147:-10,-1.20412,0 1/1:95.5347:20:0:0:20:751:-10,-6.0206,0 1/1:89.5127:18:0:0:18:658:-10,-5.41854,0 1/1:86.5027:17:0:0:17:643:-10,-5.11751,0 scaffold_259 450032 . C T 306.749 . AB=0.448276;ABP=3.68421;AC=1;AF=0.00537634;AN=186;AO=15;CIGAR=1X;DP=2993;DPB=2993;DPRA=0.834478;EPP=10.1038;EPPR=5.5494;GTI=0;LEN=1;MEANALT=1;MQM=21;MQMR=23.4384;NS=93;NUMALT=1;ODDS=13.7367;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=526;QR=108291;RO=2977;RPP=35.5824;RPPR=6057.28;RUN=1;SAF=11;SAP=10.1038;SAR=4;SRF=1455;SRP=6.28465;SRR=1522;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:25:25:901:0:0:0,-7.52575,-10 0/0:98.7905:14:14:507:0:0:0,-4.21442,-10 0/0:99:38:38:1338:0:0:0,-10,-10 0/0:99:21:21:762:0:0:0,-6.32163,-10 0/0:99:44:44:1621:0:0:0,-10,-10 0/0:95.7808:13:13:485:0:0:0,-3.91339,-10 0/0:99:70:70:2516:0:0:0,-10,-10 0/0:99:38:38:1381:0:0:0,-10,-10 0/0:99:25:25:885:0:0:0,-7.52575,-10 0/0:74.7092:6:6:218:0:0:0,-1.80618,-10 0/0:99:17:17:607:0:0:0,-5.11751,-10 0/0:98.7905:14:14:522:0:0:0,-4.21442,-10 0/0:99:57:57:2106:0:0:0,-10,-10 0/0:99:52:52:1877:0:0:0,-10,-10 0/0:99:42:42:1560:0:0:0,-10,-10 0/0:99:44:44:1616:0:0:0,-10,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:92.7707:12:12:446:0:0:0,-3.61236,-10 0/0:99:43:43:1597:0:0:0,-10,-10 0/0:99:63:63:2232:0:0:0,-10,-10 0/0:99:40:40:1447:0:0:0,-10,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:99:15:15:563:0:0:0,-4.51545,-10 0/0:99:34:34:1260:0:0:0,-10,-10 0/0:99:33:33:1237:0:0:0,-9.93399,-10 0/0:99:42:42:1558:0:0:0,-10,-10 0/0:99:33:33:1202:0:0:0,-9.93399,-10 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:99:24:24:843:0:0:0,-7.22472,-10 0/0:99:56:56:2077:0:0:0,-10,-10 0/0:86.7499:10:10:376:0:0:0,-3.0103,-10 0/0:65.6783:3:3:114:0:0:0,-0.90309,-10 0/0:99:27:27:969:0:0:0,-8.12781,-10 0/0:99:18:18:645:0:0:0,-5.41854,-10 0/0:99:30:30:1125:0:0:0,-9.0309,-10 0/0:89.7596:11:11:389:0:0:0,-3.31133,-10 0/0:99:17:17:630:0:0:0,-5.11751,-10 0/0:99:41:41:1509:0:0:0,-10,-10 0/0:99:23:23:828:0:0:0,-6.92369,-10 0/0:92.7707:12:12:454:0:0:0,-3.61236,-10 0/0:99:41:41:1467:0:0:0,-10,-10 0/0:99:25:25:892:0:0:0,-7.52575,-10 0/0:99:23:23:838:0:0:0,-6.92369,-10 0/0:99:55:55:1915:0:0:0,-10,-10 0/0:99:31:31:1164:0:0:0,-9.33193,-10 0/0:99:19:19:697:0:0:0,-5.71957,-10 0/0:99:59:59:2159:0:0:0,-10,-10 0/0:99:46:46:1699:0:0:0,-10,-10 0/0:99:25:25:918:0:0:0,-7.52575,-10 0/0:99:53:53:1881:0:0:0,-10,-10 0/0:99:21:21:758:0:0:0,-6.32163,-10 0/0:99:49:48:1760:0:0:0,-10,-10 0/0:99:21:21:762:0:0:0,-6.32163,-10 0/0:71.6989:5:5:167:0:0:0,-1.50515,-10 0/0:99:69:69:2453:0:0:0,-10,-10 0/0:99:22:22:791:0:0:0,-6.62266,-10 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:99:20:20:713:0:0:0,-6.0206,-10 0/0:99:38:38:1415:0:0:0,-10,-10 0/0:99:24:24:860:0:0:0,-7.22472,-10 0/0:99:46:46:1684:0:0:0,-10,-10 0/0:99:85:85:3104:0:0:0,-10,-10 0/0:99:44:44:1631:0:0:0,-10,-10 0/0:91.589:31:30:1070:1:38:0,-4.04057,-10 0/0:99:17:17:625:0:0:0,-5.11751,-10 0/0:99:31:31:1069:0:0:0,-9.33193,-10 0/0:99:52:52:1902:0:0:0,-10,-10 0/0:89.7596:11:11:375:0:0:0,-3.31133,-10 0/0:99:46:46:1657:0:0:0,-10,-10 0/0:99:16:16:596:0:0:0,-4.81648,-10 0/0:99:28:28:1052:0:0:0,-8.42884,-10 0/0:99:54:54:2022:0:0:0,-10,-10 0/0:99:54:54:1955:0:0:0,-10,-10 0/0:99:17:17:612:0:0:0,-5.11751,-10 0/1:99:29:16:550:13:472:-10,0,-10 0/0:99:32:32:1152:0:0:0,-9.63296,-10 0/0:99:18:18:679:0:0:0,-5.41854,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:98.7905:14:14:532:0:0:0,-4.21442,-10 0/0:99:20:20:728:0:0:0,-6.0206,-10 0/0:99:61:61:2226:0:0:0,-10,-10 0/0:99:65:65:2356:0:0:0,-10,-10 0/0:99:31:31:1125:0:0:0,-9.33193,-10 0/0:99:32:32:1121:0:0:0,-9.63296,-10 0/0:99:49:49:1766:0:0:0,-10,-10 0/0:92.7707:12:12:432:0:0:0,-3.61236,-10 0/0:99:39:39:1365:0:0:0,-10,-10 0/0:99:20:20:731:0:0:0,-6.0206,-10 0/0:93.9653:21:20:754:1:16:0,-3.39941,-10 0/0:99:36:36:1358:0:0:0,-10,-10 0/0:99:34:34:1222:0:0:0,-10,-10 0/0:99:35:35:1250:0:0:0,-10,-10 scaffold_259 450038 . A G 1344.99 . AB=0.329114;ABP=43.0863;AC=4;AF=0.0215054;AN=186;AO=63;CIGAR=1X;DP=2993;DPB=2993;DPRA=1.14472;EPP=10.7656;EPPR=4.44903;GTI=2;LEN=1;MEANALT=1.13333;MQM=21;MQMR=23.4843;NS=93;NUMALT=1;ODDS=1.94108;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2240;QR=106062;RO=2922;RPP=139.813;RPPR=5929.58;RUN=1;SAF=24;SAP=10.7656;SAR=39;SRF=1436;SRP=4.86816;SRR=1486;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:25:25:895:0:0:0,-7.52575,-10 0/0:73.8575:14:14:479:0:0:0,-4.21442,-10 0/0:99:38:37:1306:0:0:0,-10,-10 0/0:94.9273:21:21:779:0:0:0,-6.32163,-10 0/1:99:44:32:1177:12:448:-10,0,-10 0/0:67.8369:13:12:453:0:0:0,-3.61236,-10 0/0:99:70:69:2519:1:14:0,-10,-10 0/0:99:38:38:1380:0:0:0,-10,-10 0/0:99:25:25:928:0:0:0,-7.52575,-10 0/0:49.7751:6:6:228:0:0:0,-1.80618,-10 0/0:82.8883:17:17:599:0:0:0,-5.11751,-10 0/0:73.8575:14:14:526:0:0:0,-4.21442,-10 0/0:99:57:57:2093:0:0:0,-10,-10 0/0:99:52:52:1893:0:0:0,-10,-10 0/0:99:42:42:1507:0:0:0,-10,-10 0/0:99:44:44:1622:0:0:0,-10,-10 0/0:99:34:34:1166:0:0:0,-10,-10 0/0:67.8369:12:12:444:0:0:0,-3.61236,-10 0/0:99:43:43:1571:0:0:0,-10,-10 0/0:99:63:62:2224:1:27:0,-10,-10 0/0:99:40:40:1474:0:0:0,-10,-10 0/0:99:30:30:1099:0:0:0,-9.0309,-10 0/0:76.8678:15:15:545:0:0:0,-4.51545,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/0:79.4752:33:32:1184:1:36:0,-4.81548,-10 0/0:99:42:42:1518:0:0:0,-10,-10 0/0:99:33:32:1182:0:0:0,-9.63296,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:99:24:24:821:0:0:0,-7.22472,-10 0/0:99:56:56:2048:0:0:0,-10,-10 0/0:61.8163:10:10:369:0:0:0,-3.0103,-10 0/0:40.7442:3:3:113:0:0:0,-0.90309,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:85.8984:18:18:649:0:0:0,-5.41854,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:0.0830973:11:9:314:1:38:-1.4097,0,-10 0/0:82.8883:17:17:616:0:0:0,-5.11751,-10 0/0:99:41:40:1507:1:27:0,-8.02945,-10 0/0:99:23:23:790:0:0:0,-6.92369,-10 0/0:64.8266:12:11:406:0:0:0,-3.31133,-10 0/0:99:41:41:1505:0:0:0,-10,-10 0/0:99:25:25:908:0:0:0,-7.52575,-10 0/0:99:23:23:825:0:0:0,-6.92369,-10 0/0:99:55:55:1931:0:0:0,-10,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:88.9084:19:19:691:0:0:0,-5.71957,-10 0/0:99:59:59:2077:0:0:0,-10,-10 0/0:99:46:46:1672:0:0:0,-10,-10 0/0:99:25:25:927:0:0:0,-7.52575,-10 0/0:99:53:53:1993:0:0:0,-10,-10 0/0:57.5691:21:20:706:1:27:0,-2.29941,-10 0/0:99:49:49:1752:0:0:0,-10,-10 0/0:94.9273:21:21:770:0:0:0,-6.32163,-10 0/0:0.0125947:5:4:151:1:14:-0.59382,0,-10 0/0:99:69:69:2542:0:0:0,-10,-10 0/0:97.9414:22:22:733:0:0:0,-6.62266,-10 0/0:99:29:29:1061:0:0:0,-8.72987,-10 0/0:66.4332:20:18:647:1:14:0,-3.18582,-10 0/0:99:38:38:1397:0:0:0,-10,-10 0/0:99:24:24:884:0:0:0,-7.22472,-10 0/0:99:46:46:1633:0:0:0,-10,-10 0/0:99:85:85:3075:0:0:0,-10,-10 0/0:99:44:43:1598:1:38:0,-7.80187,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:82.8883:17:17:611:0:0:0,-5.11751,-10 0/0:99:31:31:1132:0:0:0,-9.33193,-10 0/0:99:52:52:1921:0:0:0,-10,-10 0/0:64.8266:11:11:395:0:0:0,-3.31133,-10 0/0:99:46:46:1594:0:0:0,-10,-10 0/0:79.878:16:16:603:0:0:0,-4.81648,-10 0/0:99:28:28:1038:0:0:0,-8.42884,-10 0/0:99:54:54:2012:0:0:0,-10,-10 0/0:99:54:53:1926:1:38:0,-10,-10 0/1:9.11062:17:15:545:2:74:-4.04603,0,-10 0/0:99:29:29:1022:0:0:0,-8.72987,-10 0/1:99:32:24:834:8:303:-10,0,-10 0/0:85.8984:18:18:677:0:0:0,-5.41854,-10 0/0:99:33:33:1193:0:0:0,-9.93399,-10 0/0:70.8472:14:13:480:0:0:0,-3.91339,-10 0/0:91.9181:20:20:734:0:0:0,-6.0206,-10 0/0:99:61:61:2265:0:0:0,-10,-10 0/1:99:65:35:1230:30:1104:-10,0,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:99:32:31:1098:0:0:0,-9.33193,-10 0/0:99:49:49:1706:0:0:0,-10,-10 0/0:67.8369:12:12:418:0:0:0,-3.61236,-10 0/0:99:39:39:1427:0:0:0,-10,-10 0/0:43.7707:20:19:687:1:38:0,-0.91957,-10 0/0:94.9273:21:21:784:0:0:0,-6.32163,-10 0/0:99:36:36:1332:0:0:0,-10,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:99:35:35:1239:0:0:0,-10,-10 scaffold_259 454209 . C T 6275.93 . AB=0.532609;ABP=5.55942;AC=35;AF=0.190217;AN=184;AO=241;CIGAR=1X;DP=1186;DPB=1186;DPRA=1.15102;EPP=9.57878;EPPR=3.19643;GTI=4;LEN=1;MEANALT=1;MQM=59.9917;MQMR=59.9556;NS=92;NUMALT=1;ODDS=0.220005;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8661;QR=34168;RO=945;RPP=526.335;RPPR=2055.05;RUN=1;SAF=134;SAP=9.57878;SAR=107;SRF=468;SRP=3.19643;SRR=477;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.1978:10:10:361:0:0:0,-3.0103,-10 0/0:46.2184:12:12:450:0:0:0,-3.61236,-10 0/1:84.2261:16:13:476:3:114:-8.57171,0,-10 0/0:22.136:4:4:135:0:0:0,-1.20412,-10 0/0:34.1772:8:8:299:0:0:0,-2.40824,-10 0/0:43.2081:11:11:403:0:0:0,-3.31133,-10 0/0:82.3419:24:24:884:0:0:0,-7.22472,-10 0/0:46.2184:12:12:454:0:0:0,-3.61236,-10 0/0:34.1772:8:8:299:0:0:0,-2.40824,-10 0/0:25.1463:5:5:185:0:0:0,-1.50515,-10 0/0:22.136:4:4:120:0:0:0,-1.20412,-10 0/0:22.136:4:4:128:0:0:0,-1.20412,-10 0/0:70.3008:20:20:722:0:0:0,-6.0206,-10 0/0:88.3622:26:26:951:0:0:0,-7.82678,-10 0/1:99:18:8:236:10:345:-10,0,-10 0/0:46.2184:12:12:422:0:0:0,-3.61236,-10 0/0:61.2699:17:17:625:0:0:0,-5.11751,-10 0/0:31.1669:7:7:237:0:0:0,-2.10721,-10 0/0:37.1875:9:9:317:0:0:0,-2.70927,-10 0/1:99:21:13:471:8:276:-10,0,-10 0/0:55.2493:15:15:494:0:0:0,-4.51545,-10 0/0:76.3214:22:22:802:0:0:0,-6.62266,-10 1/1:14.7257:8:0:0:8:304:-10,-2.40824,0 0/1:99:8:4:138:4:152:-10,0,-10 0/0:49.2287:13:13:483:0:0:0,-3.91339,-10 0/0:61.2699:17:17:600:0:0:0,-5.11751,-10 0/0:31.1669:7:7:254:0:0:0,-2.10721,-10 0/0:34.1772:8:8:303:0:0:0,-2.40824,-10 0/1:0.736657:6:0:0:6:219:-10,-1.80618,0 0/0:61.2699:17:17:632:0:0:0,-5.11751,-10 1/1:17.736:9:0:0:9:293:-10,-2.70927,0 0/0:22.136:4:4:139:0:0:0,-1.20412,-10 0/0:46.2184:12:12:428:0:0:0,-3.61236,-10 0/1:0.352728:5:0:0:5:186:-10,-1.50515,0 1/1:23.7566:11:0:0:11:410:-10,-3.31133,0 0/0:19.1257:3:3:112:0:0:0,-0.90309,-10 0/0:28.1566:6:6:223:0:0:0,-1.80618,-10 0/1:0.33855:21:1:38:20:716:-10,-1.19941,0 0/0:28.1566:6:6:209:0:0:0,-1.80618,-10 0/1:99:14:10:373:4:152:-10,0,-10 0/0:61.2699:17:17:631:0:0:0,-5.11751,-10 0/0:73.3111:21:21:759:0:0:0,-6.32163,-10 0/0:64.2802:18:18:637:0:0:0,-5.41854,-10 0/1:99:19:11:402:8:257:-10,0,-10 0/0:49.2287:13:13:477:0:0:0,-3.91339,-10 0/0:58.2596:16:16:594:0:0:0,-4.81648,-10 0/0:61.2699:17:17:620:0:0:0,-5.11751,-10 0/1:99:13:7:262:6:218:-10,0,-10 0/0:40.1978:10:10:373:0:0:0,-3.0103,-10 0/1:99:20:13:492:7:262:-10,0,-10 1/1:23.7566:11:0:0:11:389:-10,-3.31133,0 0/0:99:33:33:1166:0:0:0,-9.93399,-10 0/0:37.1875:9:9:340:0:0:0,-2.70927,-10 0/0:25.1463:5:5:190:0:0:0,-1.50515,-10 0/1:99:25:11:393:14:527:-10,0,-10 1/1:8.70511:6:0:0:6:224:-10,-1.80618,0 0/1:99:21:9:338:12:440:-10,0,-10 0/0:43.2081:11:11:375:0:0:0,-3.31133,-10 1/1:23.7566:11:0:0:11:378:-10,-3.31133,0 1/1:17.736:9:0:0:9:311:-10,-2.70927,0 0/0:85.3521:25:25:946:0:0:0,-7.52575,-10 0/0:46.2184:12:12:436:0:0:0,-3.61236,-10 0/1:99:28:13:488:15:519:-10,0,-10 0/0:34.1772:8:8:281:0:0:0,-2.40824,-10 0/1:0.352728:5:0:0:5:189:-10,-1.50515,0 0/1:99:19:7:262:12:433:-10,0,-10 0/0:67.2905:19:19:710:0:0:0,-5.71957,-10 0/0:28.1566:6:6:223:0:0:0,-1.80618,-10 0/0:58.2596:16:16:595:0:0:0,-4.81648,-10 0/0:19.1257:3:3:114:0:0:0,-0.90309,-10 0/0:31.1669:7:7:239:0:0:0,-2.10721,-10 0/0:37.1875:9:9:331:0:0:0,-2.70927,-10 0/0:52.239:14:14:494:0:0:0,-4.21442,-10 0/0:40.1978:10:10:368:0:0:0,-3.0103,-10 0/0:49.2287:13:13:470:0:0:0,-3.91339,-10 0/0:46.2184:12:12:385:0:0:0,-3.61236,-10 0/0:28.1566:6:6:217:0:0:0,-1.80618,-10 0/0:43.2081:11:11:403:0:0:0,-3.31133,-10 1/1:8.70511:6:0:0:6:218:-10,-1.80618,0 0/0:28.1566:6:6:227:0:0:0,-1.80618,-10 1/1:59.8802:23:0:0:23:851:-10,-6.92369,0 0/0:37.1875:9:9:316:0:0:0,-2.70927,-10 0/1:99:17:9:339:8:278:-10,0,-10 0/0:55.2493:15:15:500:0:0:0,-4.51545,-10 0/0:58.2596:16:16:563:0:0:0,-4.81648,-10 0/0:34.1772:8:8:299:0:0:0,-2.40824,-10 0/0:43.2081:11:11:409:0:0:0,-3.31133,-10 0/0:34.1772:8:8:294:0:0:0,-2.40824,-10 0/0:34.1772:8:8:263:0:0:0,-2.40824,-10 0/0:99:30:30:1078:0:0:0,-9.0309,-10 0/0:64.2802:18:18:652:0:0:0,-5.41854,-10 0/0:79.3317:23:23:814:0:0:0,-6.92369,-10 scaffold_259 454223 . G A 28.0679 . AB=0.375;ABP=4.09604;AC=1;AF=0.00543478;AN=184;AO=4;CIGAR=1X;DP=1193;DPB=1193;DPRA=1.20052;EPP=3.0103;EPPR=3.02676;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9587;NS=92;NUMALT=1;ODDS=6.46128;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=152;QR=43799;RO=1187;RPP=11.6962;RPPR=2520.11;RUN=1;SAF=2;SAP=3.0103;SAR=2;SRF=599;SRP=3.23165;SRR=588;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:74.9847:10:10:345:0:0:0,-3.0103,-10 0/0:81.0052:12:12:456:0:0:0,-3.61236,-10 0/0:90.0357:16:15:555:0:0:0,-4.51545,-10 0/0:56.9229:4:4:145:0:0:0,-1.20412,-10 0/1:28.0679:8:5:190:3:114:-9.97995,0,-10 0/0:77.9949:11:11:392:0:0:0,-3.31133,-10 0/0:99:24:24:861:0:0:0,-7.22472,-10 0/0:84.0155:13:13:480:0:0:0,-3.91339,-10 0/0:65.9538:8:7:264:0:0:0,-2.10721,-10 0/0:59.9332:5:5:189:0:0:0,-1.50515,-10 0/0:56.9229:4:4:150:0:0:0,-1.20412,-10 0/0:56.9229:4:4:147:0:0:0,-1.20412,-10 0/0:99:20:20:749:0:0:0,-6.0206,-10 0/0:99:26:26:983:0:0:0,-7.82678,-10 0/0:99:18:18:649:0:0:0,-5.41854,-10 0/0:81.0052:12:12:454:0:0:0,-3.61236,-10 0/0:96.057:17:17:597:0:0:0,-5.11751,-10 0/0:65.9538:7:7:264:0:0:0,-2.10721,-10 0/0:74.9847:10:10:356:0:0:0,-3.0103,-10 0/0:99:21:21:773:0:0:0,-6.32163,-10 0/0:96.057:17:17:613:0:0:0,-5.11751,-10 0/0:99:22:22:835:0:0:0,-6.62266,-10 0/0:68.9641:8:8:304:0:0:0,-2.40824,-10 0/0:68.9641:8:8:304:0:0:0,-2.40824,-10 0/0:84.0155:13:13:494:0:0:0,-3.91339,-10 0/0:99:18:18:675:0:0:0,-5.41854,-10 0/0:65.9538:7:7:266:0:0:0,-2.10721,-10 0/0:71.9744:9:9:334:0:0:0,-2.70927,-10 0/0:62.9435:6:6:228:0:0:0,-1.80618,-10 0/0:96.057:17:17:641:0:0:0,-5.11751,-10 0/0:71.9744:9:9:329:0:0:0,-2.70927,-10 0/0:56.9229:4:4:151:0:0:0,-1.20412,-10 0/0:81.0052:12:12:452:0:0:0,-3.61236,-10 0/0:59.9332:5:5:190:0:0:0,-1.50515,-10 0/0:77.9949:11:11:378:0:0:0,-3.31133,-10 0/0:53.9126:3:3:107:0:0:0,-0.90309,-9.98667 0/0:62.9435:6:6:228:0:0:0,-1.80618,-10 0/0:99:21:21:787:0:0:0,-6.32163,-10 0/0:62.9435:6:6:205:0:0:0,-1.80618,-10 0/0:87.0256:14:14:527:0:0:0,-4.21442,-10 0/0:96.057:17:17:632:0:0:0,-5.11751,-10 0/0:99:21:21:772:0:0:0,-6.32163,-10 0/0:99:18:18:660:0:0:0,-5.41854,-10 0/0:99:19:19:689:0:0:0,-5.71957,-10 0/0:84.0155:13:13:491:0:0:0,-3.91339,-10 0/0:93.0456:16:16:582:0:0:0,-4.81648,-10 0/0:96.057:17:17:645:0:0:0,-5.11751,-10 0/0:84.0155:13:13:461:0:0:0,-3.91339,-10 0/0:74.9847:10:10:378:0:0:0,-3.0103,-10 0/0:99:20:20:752:0:0:0,-6.0206,-10 0/0:77.9949:11:11:408:0:0:0,-3.31133,-10 0/0:99:33:33:1230:0:0:0,-9.93399,-10 0/0:71.9744:9:9:342:0:0:0,-2.70927,-10 0/0:59.9332:5:5:190:0:0:0,-1.50515,-10 0/0:99:25:25:904:0:0:0,-7.52575,-10 0/0:62.9435:6:6:223:0:0:0,-1.80618,-10 0/0:99:21:21:737:0:0:0,-6.32163,-10 0/0:77.9949:11:11:405:0:0:0,-3.31133,-10 0/0:77.9949:11:11:395:0:0:0,-3.31133,-10 0/0:71.9744:9:9:316:0:0:0,-2.70927,-10 0/0:99:25:25:934:0:0:0,-7.52575,-10 0/0:81.0052:12:12:407:0:0:0,-3.61236,-10 0/0:99:28:28:1061:0:0:0,-8.42884,-10 0/0:68.9641:8:8:304:0:0:0,-2.40824,-10 0/0:59.9332:5:5:185:0:0:0,-1.50515,-10 0/0:99:19:19:721:0:0:0,-5.71957,-10 0/0:99:19:19:711:0:0:0,-5.71957,-10 0/0:62.9435:6:6:228:0:0:0,-1.80618,-10 0/0:93.0456:16:16:582:0:0:0,-4.81648,-10 0/0:53.9126:3:3:113:0:0:0,-0.90309,-10 0/0:65.9538:7:7:262:0:0:0,-2.10721,-10 0/0:71.9744:9:9:338:0:0:0,-2.70927,-10 0/0:87.0256:14:14:496:0:0:0,-4.21442,-10 0/0:74.9847:10:10:380:0:0:0,-3.0103,-10 0/0:84.0155:13:13:482:0:0:0,-3.91339,-10 0/0:81.0052:12:12:402:0:0:0,-3.61236,-10 0/0:62.9435:6:6:219:0:0:0,-1.80618,-10 0/0:77.9949:11:11:416:0:0:0,-3.31133,-10 0/0:62.9435:6:6:226:0:0:0,-1.80618,-10 0/0:62.9435:6:6:228:0:0:0,-1.80618,-10 0/0:99:23:23:836:0:0:0,-6.92369,-10 0/0:74.9847:10:10:369:0:0:0,-3.0103,-10 0/0:96.057:17:17:615:0:0:0,-5.11751,-10 0/0:90.0357:15:15:561:0:0:0,-4.51545,-10 0/0:93.0456:16:16:600:0:0:0,-4.81648,-10 0/0:68.9641:8:8:303:0:0:0,-2.40824,-10 0/0:77.9949:11:11:417:0:0:0,-3.31133,-10 0/0:68.9641:8:8:303:0:0:0,-2.40824,-10 0/0:68.9641:8:8:304:0:0:0,-2.40824,-10 0/0:99:30:30:1081:0:0:0,-9.0309,-10 0/0:99:18:18:670:0:0:0,-5.41854,-10 0/0:60.411:23:22:786:1:38:0,-1.76196,-10 scaffold_259 454234 . A G 11347.4 . AB=0.529279;ABP=6.31642;AC=56;AF=0.304348;AN=184;AO=407;CIGAR=1X;DP=1195;DPB=1195;DPRA=1.32339;EPP=3.05832;EPPR=3.34416;GTI=0;LEN=1;MEANALT=1;MQM=59.941;MQMR=59.9682;NS=92;NUMALT=1;ODDS=1.01056;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=14914;QR=29159;RO=787;RPP=860.934;RPPR=1651.7;RUN=1;SAF=205;SAP=3.05832;SAR=202;SRF=395;SRP=3.03513;SRR=392;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:25.4512:10:1:38:9:313:-10,0,-1.7897 1/1:35.548:12:0:0:12:456:-10,-3.61236,0 0/1:86.0547:15:3:110:12:441:-10,0,-8.40923 0/0:14.4292:4:4:130:0:0:0,-1.20412,-10 0/1:99:8:3:113:5:187:-10,0,-9.88661 0/0:35.5013:11:11:410:0:0:0,-3.31133,-10 0/1:99:24:14:499:10:380:-10,0,-10 1/1:38.5583:13:0:0:13:485:-10,-3.91339,0 1/1:20.4965:7:0:0:7:263:-10,-2.10721,0 0/0:17.4395:5:5:185:0:0:0,-1.50515,-10 0/0:17.4395:5:5:190:0:0:0,-1.50515,-10 1/1:11.4656:4:0:0:4:130:-10,-1.20412,0 0/1:99:20:10:371:10:343:-10,0,-10 0/0:80.6557:26:26:977:0:0:0,-7.82678,-10 0/1:99:18:10:371:8:265:-10,0,-10 0/0:38.5116:13:12:456:0:0:0,-3.61236,-10 0/0:53.5631:17:17:605:0:0:0,-5.11751,-10 1/1:20.4965:7:0:0:7:241:-10,-2.10721,0 0/0:32.491:10:10:379:0:0:0,-3.0103,-10 0/1:99:21:8:300:13:467:-10,0,-10 0/1:99:17:8:300:9:290:-10,0,-10 0/1:99:22:14:527:8:304:-10,0,-10 0/0:26.4704:8:8:303:0:0:0,-2.40824,-10 0/0:26.4704:8:8:288:0:0:0,-2.40824,-10 0/0:41.5219:13:13:494:0:0:0,-3.91339,-10 0/0:56.5734:18:18:677:0:0:0,-5.41854,-10 0/0:23.4601:7:7:266:0:0:0,-2.10721,-10 1/1:26.5171:9:0:0:9:320:-10,-2.70927,0 0/0:20.4498:6:6:227:0:0:0,-1.80618,-10 0/1:99:17:7:244:10:380:-10,0,-10 0/0:29.4807:9:9:327:0:0:0,-2.70927,-10 0/0:14.4292:4:4:152:0:0:0,-1.20412,-10 0/0:38.5116:12:12:426:0:0:0,-3.61236,-10 0/0:17.4395:5:5:190:0:0:0,-1.50515,-10 0/0:35.5013:11:11:390:0:0:0,-3.31133,-10 0/0:11.4189:3:3:92:0:0:0,-0.90309,-8.58667 0/0:20.4498:6:6:224:0:0:0,-1.80618,-10 0/0:65.6043:21:21:779:0:0:0,-6.32163,-10 1/1:17.4862:6:0:0:6:199:-10,-1.80618,0 0/1:99:14:4:152:10:376:-10,0,-10 0/1:99:17:7:262:10:375:-10,0,-10 1/1:62.6407:21:0:0:21:794:-10,-6.32163,0 0/0:56.5734:18:18:659:0:0:0,-5.41854,-10 0/1:99:19:8:292:11:414:-10,0,-10 0/0:41.5219:13:13:494:0:0:0,-3.91339,-10 0/1:99:16:9:320:7:266:-10,0,-10 0/1:99:17:6:223:11:413:-10,0,-10 0/1:99:13:6:218:7:266:-10,0,-10 1/1:29.5274:10:0:0:10:379:-10,-3.0103,0 0/0:62.594:20:20:755:0:0:0,-6.0206,-10 0/0:35.5013:11:11:414:0:0:0,-3.31133,-10 0/1:99:33:14:518:19:693:-10,0,-10 0/0:29.4807:9:9:339:0:0:0,-2.70927,-10 0/0:17.4395:5:5:190:0:0:0,-1.50515,-10 0/0:77.6455:25:25:913:0:0:0,-7.52575,-10 0/0:20.4498:6:6:227:0:0:0,-1.80618,-10 0/1:99:21:12:431:9:340:-10,0,-10 0/0:35.5013:11:11:388:0:0:0,-3.31133,-10 0/0:35.5013:11:11:407:0:0:0,-3.31133,-10 0/0:29.4807:9:9:333:0:0:0,-2.70927,-10 0/0:77.6455:25:25:925:0:0:0,-7.52575,-10 0/0:38.5116:12:12:417:0:0:0,-3.61236,-10 0/0:86.676:28:28:1056:0:0:0,-8.42884,-10 0/0:26.4704:8:8:303:0:0:0,-2.40824,-10 0/0:17.4395:5:5:184:0:0:0,-1.50515,-10 0/1:99:19:12:445:7:266:-10,0,-10 0/1:99:19:9:342:10:377:-10,0,-10 1/1:17.4862:6:0:0:6:228:-10,-1.80618,0 0/1:99:16:9:342:7:266:-10,0,-10 1/1:8.45533:3:0:0:3:114:-10,-0.90309,0 0/0:23.4601:7:7:259:0:0:0,-2.10721,-10 0/0:29.4807:9:9:341:0:0:0,-2.70927,-10 0/0:47.5425:15:15:559:0:0:0,-4.51545,-10 0/0:32.491:10:10:372:0:0:0,-3.0103,-10 0/0:41.5219:13:13:484:0:0:0,-3.91339,-10 1/1:35.548:12:0:0:12:409:-10,-3.61236,0 0/0:20.4498:6:6:204:0:0:0,-1.80618,-10 0/1:18.57:11:10:380:1:38:-1.53006,0,-10 0/0:20.4498:6:6:224:0:0:0,-1.80618,-10 0/0:20.4498:6:6:228:0:0:0,-1.80618,-10 0/0:71.6249:23:23:860:0:0:0,-6.92369,-10 0/0:32.491:10:10:368:0:0:0,-3.0103,-10 0/0:53.5631:17:17:639:0:0:0,-5.11751,-10 0/1:99:15:6:227:9:304:-10,0,-10 0/1:99:16:6:224:10:375:-10,0,-10 0/0:26.4704:8:8:304:0:0:0,-2.40824,-10 0/0:35.5013:11:11:416:0:0:0,-3.31133,-10 1/1:23.5068:8:0:0:8:292:-10,-2.40824,0 0/1:93.4952:8:3:105:5:183:-10,0,-9.13995 1/1:89.7325:30:0:0:30:1130:-10,-9.0309,0 0/1:99:18:10:376:8:298:-10,0,-10 1/1:71.6716:24:0:0:24:854:-10,-7.22472,0 scaffold_259 596474 . A T 1248.23 . AB=0.429752;ABP=8.19671;AC=9;AF=0.048913;AN=184;AO=52;CIGAR=1X;DP=1086;DPB=1086;DPRA=1.15636;EPP=115.927;EPPR=2246.14;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.8374;NS=92;NUMALT=1;ODDS=0.417258;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1926;QR=38043;RO=1033;RPP=5.68288;RPPR=3.0124;RUN=1;SAF=22;SAP=5.68288;SAR=30;SRF=516;SRP=3.0124;SRR=517;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.1313:12:12:388:0:0:0,-3.61236,-10 0/0:48.1004:9:9:342:0:0:0,-2.70927,-10 0/1:99:12:7:266:5:190:-10,0,-10 0/0:30.0386:3:3:114:0:0:0,-0.90309,-10 0/0:54.121:11:11:418:0:0:0,-3.31133,-10 0/0:45.0901:8:8:280:0:0:0,-2.40824,-10 0/0:87.2343:22:22:778:0:0:0,-6.62266,-10 0/0:93.2539:24:24:902:0:0:0,-7.22472,-10 0/0:30.0386:3:3:107:0:0:0,-0.90309,-9.98667 0/0:30.0386:3:3:112:0:0:0,-0.90309,-10 0/0:48.1004:9:9:342:0:0:0,-2.70927,-10 0/0:30.0386:3:3:107:0:0:0,-0.90309,-9.98667 0/0:90.2441:23:23:855:0:0:0,-6.92369,-10 0/0:78.2034:19:19:694:0:0:0,-5.71957,-10 0/0:93.2539:24:24:888:0:0:0,-7.22472,-10 0/1:99:26:18:679:8:292:-10,0,-10 0/0:66.1622:15:15:558:0:0:0,-4.51545,-10 0/0:36.0592:5:5:188:0:0:0,-1.50515,-10 0/0:66.1622:15:15:564:0:0:0,-4.51545,-10 0/0:81.2137:20:20:733:0:0:0,-6.0206,-10 0/0:39.0695:6:6:227:0:0:0,-1.80618,-10 0/0:78.2034:19:19:676:0:0:0,-5.71957,-10 0/0:42.0798:7:7:215:0:0:0,-2.10721,-10 0/0:66.1622:15:15:546:0:0:0,-4.51545,-10 0/1:9.72157:9:8:302:1:38:-2.04497,0,-10 0/0:69.1725:16:16:557:0:0:0,-4.81648,-10 0/0:57.1313:12:12:432:0:0:0,-3.61236,-10 0/0:36.0592:5:5:176:0:0:0,-1.50515,-10 0/0:60.1416:13:13:488:0:0:0,-3.91339,-10 0/0:78.2034:19:19:708:0:0:0,-5.71957,-10 0/0:36.0592:5:5:185:0:0:0,-1.50515,-10 0/0:45.0901:8:8:304:0:0:0,-2.40824,-10 0/0:54.121:11:11:417:0:0:0,-3.31133,-10 0/0:33.0489:4:4:150:0:0:0,-1.20412,-10 0/0:60.1416:13:13:469:0:0:0,-3.91339,-10 0/0:33.0489:4:4:152:0:0:0,-1.20412,-10 0/0:45.0901:9:8:299:0:0:0,-2.40824,-10 0/0:57.1313:12:12:451:0:0:0,-3.61236,-10 0/0:69.1725:16:16:607:0:0:0,-4.81648,-10 0/1:4.57247:11:10:367:1:38:-1.53006,0,-10 0/0:57.1313:12:12:440:0:0:0,-3.61236,-10 0/0:66.1622:15:15:567:0:0:0,-4.51545,-10 0/0:45.0901:8:8:294:0:0:0,-2.40824,-10 0/0:69.1725:16:16:599:0:0:0,-4.81648,-10 0/0:57.1313:12:12:446:0:0:0,-3.61236,-10 0/1:99:13:6:218:7:262:-10,0,-10 0/1:99:17:8:294:9:337:-10,0,-10 0/1:77.2789:11:8:304:3:113:-9.45282,0,-10 0/1:0.0169932:11:0:0:11:391:-10,-3.31133,0 0/0:78.2034:19:19:689:0:0:0,-5.71957,-10 0/0:60.1416:13:13:493:0:0:0,-3.91339,-10 0/0:78.2034:19:19:706:0:0:0,-5.71957,-10 0/0:51.1107:10:10:349:0:0:0,-3.0103,-10 0/0:51.1107:10:10:366:0:0:0,-3.0103,-10 0/0:90.2441:23:23:863:0:0:0,-6.92369,-10 0/0:30.0386:3:3:107:0:0:0,-0.90309,-9.98667 0/1:99:11:4:152:7:265:-10,0,-10 0/0:45.0901:8:8:264:0:0:0,-2.40824,-10 0/0:39.0695:6:6:225:0:0:0,-1.80618,-10 0/0:57.1313:12:12:440:0:0:0,-3.61236,-10 0/0:69.1725:16:16:597:0:0:0,-4.81648,-10 0/0:66.1622:15:15:561:0:0:0,-4.51545,-10 0/0:96.2652:25:25:937:0:0:0,-7.52575,-10 0/0:51.1107:10:10:378:0:0:0,-3.0103,-10 0/0:39.0695:6:6:197:0:0:0,-1.80618,-10 0/0:63.1519:14:14:531:0:0:0,-4.21442,-10 0/0:66.1622:15:15:537:0:0:0,-4.51545,-10 0/0:27.0283:2:2:76:0:0:0,-0.60206,-7.22 0/0:78.2034:19:19:705:0:0:0,-5.71957,-10 0/0:39.0695:6:6:228:0:0:0,-1.80618,-10 0/0:39.0695:6:6:223:0:0:0,-1.80618,-10 0/0:69.1725:16:16:568:0:0:0,-4.81648,-10 0/0:66.1622:15:15:545:0:0:0,-4.51545,-10 0/0:45.0901:8:8:303:0:0:0,-2.40824,-10 0/0:54.121:11:11:402:0:0:0,-3.31133,-10 0/0:51.1107:10:10:375:0:0:0,-3.0103,-10 0/0:42.0798:7:7:266:0:0:0,-2.10721,-10 0/0:36.0592:5:5:186:0:0:0,-1.50515,-10 0/0:33.0489:4:4:138:0:0:0,-1.20412,-10 0/0:42.0798:7:7:243:0:0:0,-2.10721,-10 0/0:60.1416:13:13:490:0:0:0,-3.91339,-10 0/0:63.1519:14:14:490:0:0:0,-4.21442,-10 0/0:66.1622:15:15:563:0:0:0,-4.51545,-10 0/0:54.121:11:11:415:0:0:0,-3.31133,-10 0/0:81.2137:20:20:750:0:0:0,-6.0206,-10 0/0:36.0592:5:5:190:0:0:0,-1.50515,-10 0/0:42.0798:7:7:241:0:0:0,-2.10721,-10 0/0:42.0798:7:7:242:0:0:0,-2.10721,-10 0/0:45.0901:8:8:295:0:0:0,-2.40824,-10 0/0:60.1416:13:13:489:0:0:0,-3.91339,-10 0/0:69.1725:16:16:606:0:0:0,-4.81648,-10 0/0:54.121:11:11:417:0:0:0,-3.31133,-10 scaffold_259 821745 . C T 1012.17 . AB=0.632353;ABP=13.3567;AC=4;AF=0.0217391;AN=184;AO=43;CIGAR=1X;DP=1299;DPB=1299;DPRA=1.21527;EPP=9.12072;EPPR=3.34916;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9769;NS=92;NUMALT=1;ODDS=0.203449;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1567;QR=46029;RO=1256;RPP=96.3836;RPPR=2730.38;RUN=1;SAF=27;SAP=9.12072;SAR=16;SRF=635;SRP=3.34916;SRR=621;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.00352714:7:0:0:7:244:-10,-2.10721,0 0/1:0.0141258:9:0:0:9:342:-10,-2.70927,0 0/0:50.4937:13:13:493:0:0:0,-3.91339,-10 0/0:41.4628:10:10:378:0:0:0,-3.0103,-10 0/0:26.4113:5:5:166:0:0:0,-1.50515,-10 0/0:26.4113:5:5:189:0:0:0,-1.50515,-10 0/0:89.6272:26:26:920:0:0:0,-7.82678,-10 0/0:50.4937:13:13:470:0:0:0,-3.91339,-10 0/0:44.4731:11:11:415:0:0:0,-3.31133,-10 0/0:17.3804:2:2:76:0:0:0,-0.60206,-7.22 0/0:29.4216:6:6:205:0:0:0,-1.80618,-10 0/0:29.4216:6:6:228:0:0:0,-1.80618,-10 0/0:83.6069:24:24:909:0:0:0,-7.22472,-10 0/0:92.638:27:27:985:0:0:0,-8.12781,-10 0/0:65.5452:18:18:679:0:0:0,-5.41854,-10 0/0:71.5658:20:20:731:0:0:0,-6.0206,-10 0/0:44.4731:11:11:411:0:0:0,-3.31133,-10 0/0:41.4628:10:10:358:0:0:0,-3.0103,-10 0/0:65.5452:18:18:650:0:0:0,-5.41854,-10 0/0:99:40:40:1449:0:0:0,-10,-10 0/0:38.4525:9:9:329:0:0:0,-2.70927,-10 0/0:77.5864:22:22:812:0:0:0,-6.62266,-10 0/0:26.4113:5:5:189:0:0:0,-1.50515,-10 0/0:50.4937:13:13:494:0:0:0,-3.91339,-10 0/1:2.3333:16:0:0:16:601:-10,-4.81648,0 0/0:74.5761:21:21:797:0:0:0,-6.32163,-10 0/0:56.5143:15:15:539:0:0:0,-4.51545,-10 0/0:41.4628:10:10:370:0:0:0,-3.0103,-10 0/0:50.4937:13:13:493:0:0:0,-3.91339,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:26.4113:5:5:187:0:0:0,-1.50515,-10 0/0:20.3907:3:3:90:0:0:0,-0.90309,-8.4 0/0:68.5555:19:19:722:0:0:0,-5.71957,-10 0/0:29.4216:6:6:228:0:0:0,-1.80618,-10 0/0:50.4937:13:13:476:0:0:0,-3.91339,-10 0/0:29.4216:6:6:227:0:0:0,-1.80618,-10 0/0:38.4525:9:9:332:0:0:0,-2.70927,-10 0/0:50.4937:13:13:491:0:0:0,-3.91339,-10 0/0:38.4525:9:9:340:0:0:0,-2.70927,-10 0/0:41.4628:10:10:372:0:0:0,-3.0103,-10 0/0:80.5967:23:23:817:0:0:0,-6.92369,-10 0/0:47.4834:12:12:447:0:0:0,-3.61236,-10 0/0:65.5452:18:18:644:0:0:0,-5.41854,-10 0/0:77.5864:22:22:805:0:0:0,-6.62266,-10 0/0:68.5555:19:19:718:0:0:0,-5.71957,-10 0/0:44.4731:11:11:403:0:0:0,-3.31133,-10 0/0:99:38:38:1370:0:0:0,-10,-10 0/0:53.504:14:14:512:0:0:0,-4.21442,-10 0/0:53.504:14:14:493:0:0:0,-4.21442,-10 0/1:99:36:25:896:11:380:-10,0,-10 0/0:44.4731:11:11:405:0:0:0,-3.31133,-10 0/0:71.5658:20:20:737:0:0:0,-6.0206,-10 0/0:47.4834:12:12:442:0:0:0,-3.61236,-10 0/0:20.3907:3:3:114:0:0:0,-0.90309,-10 0/0:89.6272:26:26:949:0:0:0,-7.82678,-10 0/0:47.4834:12:12:456:0:0:0,-3.61236,-10 0/0:65.5452:18:18:642:0:0:0,-5.41854,-10 0/0:35.4422:8:8:304:0:0:0,-2.40824,-10 0/0:59.5246:16:16:598:0:0:0,-4.81648,-10 0/0:32.4319:7:7:242:0:0:0,-2.10721,-10 0/0:83.6069:24:24:891:0:0:0,-7.22472,-10 0/0:41.4628:10:10:373:0:0:0,-3.0103,-10 0/0:80.5967:23:23:844:0:0:0,-6.92369,-10 0/0:62.5349:17:17:643:0:0:0,-5.11751,-10 0/0:32.4319:7:7:262:0:0:0,-2.10721,-10 0/0:68.5555:19:19:681:0:0:0,-5.71957,-10 0/0:44.4731:11:11:404:0:0:0,-3.31133,-10 0/0:35.4422:8:8:247:0:0:0,-2.40824,-10 0/0:89.6272:26:26:927:0:0:0,-7.82678,-10 0/0:38.4525:9:9:342:0:0:0,-2.70927,-10 0/0:65.5452:18:18:667:0:0:0,-5.41854,-10 0/0:53.504:14:14:497:0:0:0,-4.21442,-10 0/0:86.6171:25:25:907:0:0:0,-7.52575,-10 0/0:35.4422:8:8:304:0:0:0,-2.40824,-10 0/0:62.5349:17:17:631:0:0:0,-5.11751,-10 0/0:38.4525:9:9:341:0:0:0,-2.70927,-10 0/0:26.4113:5:5:187:0:0:0,-1.50515,-10 0/0:32.4319:7:7:262:0:0:0,-2.10721,-10 0/0:26.4113:5:5:166:0:0:0,-1.50515,-10 0/0:44.4731:11:11:392:0:0:0,-3.31133,-10 0/0:92.638:27:27:933:0:0:0,-8.12781,-10 0/0:86.6171:25:25:885:0:0:0,-7.52575,-10 0/0:44.4731:11:11:414:0:0:0,-3.31133,-10 0/0:44.4731:11:11:407:0:0:0,-3.31133,-10 0/0:62.5349:17:17:605:0:0:0,-5.11751,-10 0/0:20.3907:3:3:111:0:0:0,-0.90309,-10 0/0:68.5555:19:19:703:0:0:0,-5.71957,-10 0/0:35.4422:8:8:302:0:0:0,-2.40824,-10 0/0:26.4113:5:5:180:0:0:0,-1.50515,-10 0/0:44.4731:11:11:417:0:0:0,-3.31133,-10 0/0:38.4525:9:9:341:0:0:0,-2.70927,-10 0/0:41.4628:10:10:378:0:0:0,-3.0103,-10 scaffold_259 830770 . C T 1146.08 . AB=0.435484;ABP=5.25182;AC=4;AF=0.0217391;AN=184;AO=47;CIGAR=1X;DP=1695;DPB=1695;DPRA=1.11168;EPP=5.27418;EPPR=6.17588;GTI=0;LEN=1;MEANALT=1;MQM=59.766;MQMR=59.9502;NS=92;NUMALT=1;ODDS=0.292602;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1689;QR=60705;RO=1647;RPP=105.07;RPPR=3458.86;RUN=1;SAF=27;SAP=5.27418;SAR=20;SRF=785;SRP=10.8273;SRR=862;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.8381:11:11:394:0:0:0,-3.31133,-10 0/0:51.8484:12:12:426:0:0:0,-3.61236,-10 0/0:93.9911:26:26:964:0:0:0,-7.82678,-10 0/0:51.8484:12:12:450:0:0:0,-3.61236,-10 0/0:40.0211:16:15:559:1:16:0,-2.01236,-10 0/0:36.7969:7:7:266:0:0:0,-2.10721,-10 0/0:99:43:43:1627:0:0:0,-10,-10 0/0:84.9615:23:23:846:0:0:0,-6.92369,-10 0/0:42.8175:9:9:338:0:0:0,-2.70927,-10 0/0:24.7557:3:3:113:0:0:0,-0.90309,-10 0/0:30.7763:5:5:190:0:0:0,-1.50515,-10 0/0:33.7866:6:6:226:0:0:0,-1.80618,-10 0/0:99:30:30:1092:0:0:0,-9.0309,-10 0/0:99:40:40:1456:0:0:0,-10,-10 0/0:90.9815:25:25:939:0:0:0,-7.52575,-10 0/0:99:32:32:1201:0:0:0,-9.63296,-10 0/0:78.941:21:21:756:0:0:0,-6.32163,-10 0/0:36.7969:7:7:266:0:0:0,-2.10721,-10 0/0:81.9513:22:22:789:0:0:0,-6.62266,-10 0/1:99:43:24:893:19:701:-10,0,-10 0/0:54.8587:13:13:488:0:0:0,-3.91339,-10 0/0:69.9102:18:18:659:0:0:0,-5.41854,-10 0/0:30.7763:5:5:190:0:0:0,-1.50515,-10 0/0:60.8793:15:15:566:0:0:0,-4.51545,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/0:63.8896:16:16:604:0:0:0,-4.81648,-10 0/0:72.9204:19:19:687:0:0:0,-5.71957,-10 0/0:84.9615:23:23:848:0:0:0,-6.92369,-10 0/0:99:39:39:1424:0:0:0,-10,-10 0/0:48.8381:11:11:418:0:0:0,-3.31133,-10 0/0:24.0005:10:9:338:1:16:0,-0.4103,-10 0/0:87.9716:24:24:863:0:0:0,-7.22472,-10 0/0:60.8793:15:15:556:0:0:0,-4.51545,-10 0/0:60.8793:15:15:539:0:0:0,-4.51545,-10 0/0:33.7866:6:6:205:0:0:0,-1.80618,-10 0/0:51.8484:12:12:417:0:0:0,-3.61236,-10 0/1:99:19:11:396:8:304:-10,0,-10 0/0:72.9204:19:19:704:0:0:0,-5.71957,-10 0/0:57.869:14:14:532:0:0:0,-4.21442,-10 0/0:99:30:30:1110:0:0:0,-9.0309,-10 1/1:3.76854:17:0:0:17:636:-10,-5.11751,0 0/0:57.869:14:14:465:0:0:0,-4.21442,-10 0/0:90.9815:25:25:942:0:0:0,-7.52575,-10 0/0:66.8999:17:17:637:0:0:0,-5.11751,-10 0/0:40.4892:17:16:580:1:16:0,-2.28706,-10 0/0:99:41:41:1492:0:0:0,-10,-10 0/0:99:31:31:1176:0:0:0,-9.33193,-10 0/0:69.9102:18:18:670:0:0:0,-5.41854,-10 0/0:99:28:28:1039:0:0:0,-8.42884,-10 0/0:48.8381:11:11:418:0:0:0,-3.31133,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:51.8484:12:12:441:0:0:0,-3.61236,-10 0/0:30.7763:5:5:190:0:0:0,-1.50515,-10 0/0:99:34:34:1242:0:0:0,-10,-10 0/0:51.8484:12:12:447:0:0:0,-3.61236,-10 0/0:72.9204:19:19:713:0:0:0,-5.71957,-10 0/0:30.7763:5:5:190:0:0:0,-1.50515,-10 0/0:48.8381:11:11:409:0:0:0,-3.31133,-10 0/0:45.8278:10:10:363:0:0:0,-3.0103,-10 0/0:99:29:28:1048:0:0:0,-8.42884,-10 0/0:54.8587:13:13:473:0:0:0,-3.91339,-10 0/0:90.9815:25:25:921:0:0:0,-7.52575,-10 0/0:69.9102:18:18:670:0:0:0,-5.41854,-10 0/0:42.8175:9:9:342:0:0:0,-2.70927,-10 0/0:99:33:33:1215:0:0:0,-9.93399,-10 0/0:72.9204:19:19:704:0:0:0,-5.71957,-10 0/0:48.8381:11:11:412:0:0:0,-3.31133,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:45.8278:10:10:355:0:0:0,-3.0103,-10 0/0:57.869:14:14:510:0:0:0,-4.21442,-10 0/0:97.0049:27:27:1000:0:0:0,-8.12781,-10 0/0:69.9102:18:18:635:0:0:0,-5.41854,-10 0/0:63.8896:16:16:607:0:0:0,-4.81648,-10 0/0:97.0049:27:27:967:0:0:0,-8.12781,-10 0/0:30.7763:5:5:141:0:0:0,-1.50515,-10 0/0:45.8278:10:10:379:0:0:0,-3.0103,-10 0/0:57.869:14:14:513:0:0:0,-4.21442,-10 0/0:24.7557:3:3:114:0:0:0,-0.90309,-10 0/0:45.8278:10:10:336:0:0:0,-3.0103,-10 0/0:99:32:32:1202:0:0:0,-9.63296,-10 0/0:99:31:31:1149:0:0:0,-9.33193,-10 0/0:81.9513:22:22:785:0:0:0,-6.62266,-10 0/0:60.8793:15:15:569:0:0:0,-4.51545,-10 0/0:87.9716:24:24:886:0:0:0,-7.22472,-10 0/0:51.8484:12:12:429:0:0:0,-3.61236,-10 0/0:51.8484:12:12:450:0:0:0,-3.61236,-10 0/0:66.8999:17:17:640:0:0:0,-5.11751,-10 0/0:30.7763:5:5:184:0:0:0,-1.50515,-10 0/0:75.9307:20:20:756:0:0:0,-6.0206,-10 0/0:63.8896:16:16:607:0:0:0,-4.81648,-10 0/0:69.9102:18:18:661:0:0:0,-5.41854,-10 scaffold_259 830774 . C T 59.3809 . AB=0.277778;ABP=10.7311;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1X;DP=1693;DPB=1693;DPRA=1.22876;EPP=3.0103;EPPR=6.90864;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9567;NS=92;NUMALT=1;ODDS=13.6729;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=184;QR=61465;RO=1685;RPP=16.0391;RPPR=3592.78;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=807;SRP=9.50668;SRR=878;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:83.8183:11:11:415:0:0:0,-3.31133,-10 0/0:86.8285:12:12:401:0:0:0,-3.61236,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:86.8285:12:12:450:0:0:0,-3.61236,-10 0/0:98.8668:16:16:567:0:0:0,-4.81648,-10 0/0:71.7772:7:7:264:0:0:0,-2.10721,-10 0/0:99:43:43:1529:0:0:0,-10,-10 0/0:99:23:23:819:0:0:0,-6.92369,-10 0/0:77.7978:9:9:325:0:0:0,-2.70927,-10 0/0:59.736:3:3:114:0:0:0,-0.90309,-10 0/0:65.7566:5:5:190:0:0:0,-1.50515,-10 0/0:68.7669:6:6:225:0:0:0,-1.80618,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:99:40:40:1460:0:0:0,-10,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:99:21:21:744:0:0:0,-6.32163,-10 0/0:71.7772:7:7:261:0:0:0,-2.10721,-10 0/0:99:22:22:814:0:0:0,-6.62266,-10 0/0:99:43:43:1570:0:0:0,-10,-10 0/0:89.8386:13:13:484:0:0:0,-3.91339,-10 0/0:99:18:18:637:0:0:0,-5.41854,-10 0/0:65.7566:5:5:190:0:0:0,-1.50515,-10 0/0:95.8542:15:15:544:0:0:0,-4.51545,-10 0/0:99:27:27:971:0:0:0,-8.12781,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:98.8668:16:16:597:0:0:0,-4.81648,-10 0/0:99:19:19:710:0:0:0,-5.71957,-10 0/0:99:23:23:813:0:0:0,-6.92369,-10 0/0:99:39:39:1455:0:0:0,-10,-10 0/0:83.8183:11:11:384:0:0:0,-3.31133,-10 0/0:80.8081:10:10:335:0:0:0,-3.0103,-10 0/0:99:24:24:840:0:0:0,-7.22472,-10 0/0:95.8542:15:15:558:0:0:0,-4.51545,-10 0/0:95.8542:15:15:540:0:0:0,-4.51545,-10 0/0:68.7669:6:6:226:0:0:0,-1.80618,-10 0/0:86.8285:12:12:427:0:0:0,-3.61236,-10 0/0:99:19:19:678:0:0:0,-5.71957,-10 0/0:99:19:19:716:0:0:0,-5.71957,-10 0/0:92.8466:14:14:519:0:0:0,-4.21442,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:99:17:17:624:0:0:0,-5.11751,-10 0/0:89.8386:14:13:466:0:0:0,-3.91339,-10 0/0:99:25:25:920:0:0:0,-7.52575,-10 0/0:99:17:17:637:0:0:0,-5.11751,-10 0/0:99:17:17:610:0:0:0,-5.11751,-10 0/0:99:41:41:1494:0:0:0,-10,-10 0/0:99:31:31:1171:0:0:0,-9.33193,-10 0/0:99:18:18:631:0:0:0,-5.41854,-10 0/0:99:28:28:1019:0:0:0,-8.42884,-10 0/0:83.8183:11:11:418:0:0:0,-3.31133,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:86.8285:12:12:444:0:0:0,-3.61236,-10 0/0:65.7566:5:5:185:0:0:0,-1.50515,-10 0/0:99:34:34:1209:0:0:0,-10,-10 0/0:86.8285:12:12:451:0:0:0,-3.61236,-10 0/0:99:19:19:711:0:0:0,-5.71957,-10 0/0:65.7566:5:5:190:0:0:0,-1.50515,-10 0/0:83.8183:11:11:411:0:0:0,-3.31133,-10 0/0:80.8081:10:10:352:0:0:0,-3.0103,-10 0/0:99:29:29:1023:0:0:0,-8.72987,-10 0/0:89.8386:13:13:490:0:0:0,-3.91339,-10 0/0:99:25:24:876:0:0:0,-7.22472,-10 0/0:99:18:18:655:0:0:0,-5.41854,-10 0/0:77.7978:9:9:338:0:0:0,-2.70927,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:99:19:19:678:0:0:0,-5.71957,-10 0/0:83.8183:11:11:409:0:0:0,-3.31133,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:80.8081:10:10:356:0:0:0,-3.0103,-10 0/0:92.8466:14:14:489:0:0:0,-4.21442,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/1:59.3809:18:13:489:5:168:-10,0,-10 0/0:98.8668:16:16:608:0:0:0,-4.81648,-10 0/0:99:27:26:940:1:16:0,-5.09645,-10 0/0:65.7566:5:5:158:0:0:0,-1.50515,-10 0/0:80.8081:10:10:377:0:0:0,-3.0103,-10 0/0:92.8466:14:14:528:0:0:0,-4.21442,-10 0/0:59.736:3:3:110:0:0:0,-0.90309,-10 0/0:80.8081:10:10:358:0:0:0,-3.0103,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:99:22:22:805:0:0:0,-6.62266,-10 0/0:95.8542:15:15:568:0:0:0,-4.51545,-10 0/0:99:24:24:884:0:0:0,-7.22472,-10 0/0:86.8285:12:12:408:0:0:0,-3.61236,-10 0/0:86.8285:12:12:418:0:0:0,-3.61236,-10 0/0:99:17:17:608:0:0:0,-5.11751,-10 0/0:65.7566:5:5:189:0:0:0,-1.50515,-10 0/0:99:20:20:737:0:0:0,-6.0206,-10 0/0:98.8668:16:16:579:0:0:0,-4.81648,-10 0/0:99:18:18:656:0:0:0,-5.41854,-10 scaffold_259 839055 . A C 479.846 . AB=0.583333;ABP=5.18177;AC=2;AF=0.0108696;AN=184;AO=21;CIGAR=1X;DP=1750;DPB=1750;DPRA=0.945158;EPP=11.386;EPPR=3.0417;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9589;NS=92;NUMALT=1;ODDS=6.92517;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=737;QR=64069;RO=1729;RPP=40.3389;RPPR=3653.98;RUN=1;SAF=14;SAP=8.07707;SAR=7;SRF=855;SRP=3.46368;SRR=874;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:69.2175:14:14:516:0:0:0,-4.21442,-10 0/0:45.1351:6:6:206:0:0:0,-1.80618,-10 0/0:78.2484:17:17:637:0:0:0,-5.11751,-10 0/0:36.1042:3:3:112:0:0:0,-0.90309,-10 0/0:60.1866:11:11:415:0:0:0,-3.31133,-10 0/0:63.1969:12:12:433:0:0:0,-3.61236,-10 0/0:99:27:27:1011:0:0:0,-8.12781,-10 0/0:99:35:35:1286:0:0:0,-10,-10 0/0:57.1763:10:10:357:0:0:0,-3.0103,-10 0/0:30.0836:1:1:38:0:0:0,-0.30103,-3.8 0/0:69.2175:14:14:530:0:0:0,-4.21442,-10 0/0:51.1557:8:8:282:0:0:0,-2.40824,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:99:45:45:1673:0:0:0,-10,-10 0/0:99:26:26:986:0:0:0,-7.82678,-10 0/0:96.3102:23:23:874:0:0:0,-6.92369,-10 0/0:99:31:31:1113:0:0:0,-9.33193,-10 0/0:57.1763:10:10:376:0:0:0,-3.0103,-10 0/0:63.1969:12:12:451:0:0:0,-3.61236,-10 0/0:99:40:40:1502:0:0:0,-10,-10 0/0:87.2793:20:20:758:0:0:0,-6.0206,-10 0/0:99:32:32:1210:0:0:0,-9.63296,-10 0/0:63.1969:12:12:456:0:0:0,-3.61236,-10 0/0:99:27:27:1009:0:0:0,-8.12781,-10 0/0:99:29:29:1093:0:0:0,-8.72987,-10 0/0:99:28:28:1044:0:0:0,-8.42884,-10 0/0:87.2793:20:20:728:0:0:0,-6.0206,-10 0/0:63.1969:12:12:452:0:0:0,-3.61236,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:99:31:31:1158:0:0:0,-9.33193,-10 0/0:54.166:9:9:337:0:0:0,-2.70927,-10 0/0:57.1763:10:10:380:0:0:0,-3.0103,-10 0/0:75.2381:16:16:569:0:0:0,-4.81648,-10 0/0:66.2072:13:13:480:0:0:0,-3.91339,-10 0/0:72.2278:15:15:548:0:0:0,-4.51545,-10 0/0:57.1763:10:10:368:0:0:0,-3.0103,-10 0/0:69.2175:14:14:519:0:0:0,-4.21442,-10 0/0:87.2793:20:20:756:0:0:0,-6.0206,-10 0/0:75.2381:16:16:564:0:0:0,-4.81648,-10 0/0:84.2687:19:19:710:0:0:0,-5.71957,-10 0/0:84.2687:19:19:708:0:0:0,-5.71957,-10 0/0:81.2587:18:18:656:0:0:0,-5.41854,-10 0/0:42.1248:5:5:190:0:0:0,-1.50515,-10 0/0:99:36:36:1358:0:0:0,-10,-10 0/0:78.2484:17:17:622:0:0:0,-5.11751,-10 0/0:90.2885:21:21:789:0:0:0,-6.32163,-10 0/0:99:30:30:1131:0:0:0,-9.0309,-10 0/0:96.3102:23:23:789:0:0:0,-6.92369,-10 0/0:63.1969:12:12:450:0:0:0,-3.61236,-10 0/0:99:35:35:1300:0:0:0,-10,-10 0/0:57.1763:10:10:377:0:0:0,-3.0103,-10 0/0:99:25:25:924:0:0:0,-7.52575,-10 0/0:63.1969:12:12:451:0:0:0,-3.61236,-10 0/0:36.1042:3:3:112:0:0:0,-0.90309,-10 0/0:99:42:42:1570:0:0:0,-10,-10 0/0:57.1763:10:10:374:0:0:0,-3.0103,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:75.2381:16:16:607:0:0:0,-4.81648,-10 0/0:93.2978:22:22:831:0:0:0,-6.62266,-10 0/0:66.2072:13:13:484:0:0:0,-3.91339,-10 0/1:99:28:15:558:13:478:-10,0,-10 0/0:78.2484:17:17:624:0:0:0,-5.11751,-10 0/0:99:38:38:1422:0:0:0,-10,-10 0/0:66.2072:13:13:492:0:0:0,-3.91339,-10 0/0:45.1351:6:6:228:0:0:0,-1.80618,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 0/0:99:33:33:1240:0:0:0,-9.93399,-10 0/1:1.98653e-05:8:0:0:8:259:-10,-2.40824,0 0/0:99:31:31:1133:0:0:0,-9.33193,-10 0/0:63.1969:12:12:446:0:0:0,-3.61236,-10 0/0:87.2793:20:20:744:0:0:0,-6.0206,-10 0/0:84.2687:19:19:720:0:0:0,-5.71957,-10 0/0:99:29:29:1041:0:0:0,-8.72987,-10 0/0:66.2072:13:13:492:0:0:0,-3.91339,-10 0/0:75.2381:16:16:604:0:0:0,-4.81648,-10 0/0:51.1557:8:8:304:0:0:0,-2.40824,-10 0/0:69.2175:14:14:526:0:0:0,-4.21442,-10 0/0:75.2381:16:16:592:0:0:0,-4.81648,-10 0/0:39.1145:4:4:152:0:0:0,-1.20412,-10 0/0:54.166:9:9:342:0:0:0,-2.70927,-10 0/0:99:26:26:933:0:0:0,-7.82678,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 0/0:72.2278:15:15:540:0:0:0,-4.51545,-10 0/0:99:28:28:978:0:0:0,-8.42884,-10 0/0:96.3102:23:23:805:0:0:0,-6.92369,-10 0/0:60.1866:11:11:410:0:0:0,-3.31133,-10 0/0:84.2687:19:19:715:0:0:0,-5.71957,-10 0/0:72.2278:15:15:536:0:0:0,-4.51545,-10 0/0:42.1248:5:5:190:0:0:0,-1.50515,-10 0/0:99:27:27:976:0:0:0,-8.12781,-10 0/0:93.2978:22:22:813:0:0:0,-6.62266,-10 0/0:93.2978:22:22:831:0:0:0,-6.62266,-10 scaffold_259 870433 . G C 1636.8 . AB=0.507937;ABP=3.04477;AC=4;AF=0.0224719;AN=178;AO=60;CIGAR=1X;DP=2527;DPB=2527;DPRA=1.07088;EPP=4.31318;EPPR=28.4586;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9554;NS=89;NUMALT=1;ODDS=7.64744;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2238;QR=90362;RO=2466;RPP=133.299;RPPR=5357.86;RUN=1;SAF=33;SAP=4.31318;SAR=27;SRF=1148;SRP=28.4586;SRR=1318;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.6364:17:17:637:0:0:0,-5.11751,-10 0/0:70.6364:17:17:633:0:0:0,-5.11751,-10 0/0:94.7181:25:25:897:0:0:0,-7.52575,-10 0/0:79.6672:20:20:715:0:0:0,-6.0206,-10 0/0:73.6466:18:18:658:0:0:0,-5.41854,-10 0/0:67.6261:16:16:556:0:0:0,-4.81648,-10 0/0:99:52:52:1829:0:0:0,-10,-10 0/0:99:33:33:1214:0:0:0,-9.93399,-10 0/0:73.6466:18:18:640:0:0:0,-5.41854,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:58.5952:13:13:479:0:0:0,-3.91339,-10 .:.:.:.:.:.:.:. 0/0:99:31:31:1158:0:0:0,-9.33193,-10 0/0:99:44:44:1608:0:0:0,-10,-10 0/0:97.7278:26:26:981:0:0:0,-7.82678,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:58.5952:13:13:475:0:0:0,-3.91339,-10 0/0:99:38:38:1404:0:0:0,-10,-10 0/0:99:36:36:1341:0:0:0,-10,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/0:99:56:56:2093:0:0:0,-10,-10 0/0:52.5746:11:11:404:0:0:0,-3.31133,-10 0/0:99:35:35:1256:0:0:0,-10,-10 0/0:67.6261:16:16:571:0:0:0,-4.81648,-10 0/0:64.6158:15:15:561:0:0:0,-4.51545,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:99:27:27:1003:0:0:0,-8.12781,-10 0/0:99:33:33:1179:0:0:0,-9.93399,-10 0/0:99:60:60:2249:0:0:0,-10,-10 0/0:46.554:9:9:327:0:0:0,-2.70927,-10 0/0:61.6055:14:14:499:0:0:0,-4.21442,-10 0/0:91.7081:24:24:910:0:0:0,-7.22472,-10 0/0:70.6364:17:17:610:0:0:0,-5.11751,-10 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:64.6158:15:15:558:0:0:0,-4.51545,-10 0/0:73.6466:18:18:616:0:0:0,-5.41854,-10 0/0:99:49:49:1788:0:0:0,-10,-10 0/0:76.6569:19:19:689:0:0:0,-5.71957,-10 0/0:91.7081:24:24:845:0:0:0,-7.22472,-10 0/0:99:45:45:1626:0:0:0,-10,-10 0/0:82.6775:21:21:761:0:0:0,-6.32163,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:99:50:50:1820:0:0:0,-10,-10 0/0:61.6055:14:14:526:0:0:0,-4.21442,-10 0/0:85.6878:22:22:799:0:0:0,-6.62266,-10 0/0:99:70:70:2590:0:0:0,-10,-10 0/0:99:42:42:1509:0:0:0,-10,-10 0/0:91.7081:24:24:899:0:0:0,-7.22472,-10 0/0:99:55:55:2041:0:0:0,-10,-10 0/0:70.6364:17:17:629:0:0:0,-5.11751,-10 0/0:99:54:54:1922:0:0:0,-10,-10 0/0:79.6672:20:20:727:0:0:0,-6.0206,-10 0/0:58.5952:13:13:454:0:0:0,-3.91339,-10 0/0:99:57:57:2088:0:0:0,-10,-10 0/0:88.698:23:23:818:0:0:0,-6.92369,-10 0/0:99:27:27:937:0:0:0,-8.12781,-10 0/0:52.5746:11:11:413:0:0:0,-3.31133,-10 0/0:82.6775:21:21:791:0:0:0,-6.32163,-10 0/0:67.6261:16:16:602:0:0:0,-4.81648,-10 0/0:99:39:39:1447:0:0:0,-10,-10 0/0:91.7081:24:24:910:0:0:0,-7.22472,-10 0/1:99:40:19:714:21:785:-10,0,-10 0/0:99:31:31:1159:0:0:0,-9.33193,-10 1/1:33.2165:28:0:0:28:1051:-10,-8.42884,0 0/0:99:41:41:1483:0:0:0,-10,-10 0/1:99:23:12:424:11:402:-10,0,-10 0/0:58.5952:13:13:449:0:0:0,-3.91339,-10 0/0:99:57:57:2085:0:0:0,-10,-10 0/0:64.6158:15:15:551:0:0:0,-4.51545,-10 0/0:97.7278:26:26:953:0:0:0,-7.82678,-10 0/0:99:47:47:1702:0:0:0,-10,-10 0/0:99:36:36:1315:0:0:0,-10,-10 0/0:91.7081:24:24:902:0:0:0,-7.22472,-10 0/0:99:39:39:1462:0:0:0,-10,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:88.698:23:23:860:0:0:0,-6.92369,-10 0/0:46.554:9:9:342:0:0:0,-2.70927,-10 0/0:82.6775:21:21:774:0:0:0,-6.32163,-10 0/0:85.6878:22:22:827:0:0:0,-6.62266,-10 0/0:99:51:51:1894:0:0:0,-10,-10 0/0:99:34:34:1270:0:0:0,-10,-10 0/0:99:34:34:1278:0:0:0,-10,-10 0/0:99:38:38:1413:0:0:0,-10,-10 0/0:43.5437:8:8:296:0:0:0,-2.40824,-10 0/0:99:29:28:1033:0:0:0,-8.42884,-10 0/0:73.6466:18:18:657:0:0:0,-5.41854,-10 0/0:34.5128:5:5:190:0:0:0,-1.50515,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:94.7181:25:25:940:0:0:0,-7.52575,-10 0/0:82.6775:21:21:739:0:0:0,-6.32163,-10 scaffold_259 870437 . C G 1126.25 . AB=0.47191;ABP=3.62026;AC=2;AF=0.011236;AN=178;AO=43;CIGAR=1X;DP=2527;DPB=2527;DPRA=1.32947;EPP=4.27278;EPPR=25.4074;GTI=0;LEN=1;MEANALT=1;MQM=59.2558;MQMR=59.9815;NS=89;NUMALT=1;ODDS=5.76633;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1549;QR=91131;RO=2482;RPP=96.3836;RPPR=5392.6;RUN=1;SAF=19;SAP=4.27278;SAR=24;SRF=1161;SRP=25.4074;SRR=1321;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.1842:17:17:636:0:0:0,-5.11751,-10 0/0:61.1842:17:17:645:0:0:0,-5.11751,-10 0/0:85.2664:25:25:882:0:0:0,-7.52575,-10 0/0:70.2151:20:20:730:0:0:0,-6.0206,-10 0/0:64.1945:18:18:669:0:0:0,-5.41854,-10 0/0:58.1739:16:16:568:0:0:0,-4.81648,-10 0/1:99:52:26:895:26:929:-10,0,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:64.1945:18:18:671:0:0:0,-5.41854,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:49.143:13:13:450:0:0:0,-3.91339,-10 .:.:.:.:.:.:.:. 0/0:99:31:31:1136:0:0:0,-9.33193,-10 0/0:99:44:44:1641:0:0:0,-10,-10 0/0:88.2765:26:26:972:0:0:0,-7.82678,-10 0/1:99:37:21:794:16:604:-10,0,-10 0/0:49.143:13:13:470:0:0:0,-3.91339,-10 0/0:99:38:38:1406:0:0:0,-10,-10 0/0:99:36:36:1301:0:0:0,-10,-10 0/0:91.2877:27:27:1006:0:0:0,-8.12781,-10 0/0:99:56:56:2072:0:0:0,-10,-10 0/0:43.1224:11:11:416:0:0:0,-3.31133,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:58.1739:16:16:594:0:0:0,-4.81648,-10 0/0:55.1636:15:15:563:0:0:0,-4.51545,-10 0/0:97.3044:29:29:1052:0:0:0,-8.72987,-10 0/0:91.2877:27:27:1001:0:0:0,-8.12781,-10 0/0:99:33:33:1216:0:0:0,-9.93399,-10 0/0:99:60:60:2171:0:0:0,-10,-10 0/0:37.1018:9:9:310:0:0:0,-2.70927,-10 0/0:52.1533:14:14:487:0:0:0,-4.21442,-10 0/0:82.2562:24:24:900:0:0:0,-7.22472,-10 0/0:61.1842:17:17:641:0:0:0,-5.11751,-10 0/0:99:32:32:1147:0:0:0,-9.63296,-10 0/0:55.1636:15:15:547:0:0:0,-4.51545,-10 0/0:64.1945:18:18:627:0:0:0,-5.41854,-10 0/0:99:49:49:1802:0:0:0,-10,-10 0/0:67.2048:19:19:676:0:0:0,-5.71957,-10 0/0:82.2562:24:24:889:0:0:0,-7.22472,-10 0/0:99:45:45:1693:0:0:0,-10,-10 0/0:73.2254:21:21:747:0:0:0,-6.32163,-10 0/0:97.3044:29:29:1055:0:0:0,-8.72987,-10 0/0:99:50:50:1865:0:0:0,-10,-10 0/0:52.1533:14:14:528:0:0:0,-4.21442,-10 0/0:76.2357:22:22:792:0:0:0,-6.62266,-10 0/0:99:70:70:2568:0:0:0,-10,-10 0/0:99:42:42:1529:0:0:0,-10,-10 0/0:82.2562:24:24:876:0:0:0,-7.22472,-10 0/0:99:55:55:2050:0:0:0,-10,-10 0/0:61.1842:17:17:624:0:0:0,-5.11751,-10 0/0:99:54:54:1936:0:0:0,-10,-10 0/0:70.2151:20:20:735:0:0:0,-6.0206,-10 0/0:49.143:13:13:458:0:0:0,-3.91339,-10 0/0:99:57:57:2096:0:0:0,-10,-10 0/0:51.6104:23:22:820:1:16:0,-3.96196,-10 0/0:91.2877:27:27:995:0:0:0,-8.12781,-10 0/0:43.1224:11:11:392:0:0:0,-3.31133,-10 0/0:73.2254:21:21:790:0:0:0,-6.32163,-10 0/0:58.1739:16:16:607:0:0:0,-4.81648,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:82.2562:24:24:894:0:0:0,-7.22472,-10 0/0:99:40:40:1418:0:0:0,-10,-10 0/0:99:31:31:1175:0:0:0,-9.33193,-10 0/0:94.2985:28:28:1038:0:0:0,-8.42884,-10 0/0:99:41:41:1496:0:0:0,-10,-10 0/0:79.246:23:23:833:0:0:0,-6.92369,-10 0/0:49.143:13:13:449:0:0:0,-3.91339,-10 0/0:99:57:57:2117:0:0:0,-10,-10 0/0:55.1636:15:15:546:0:0:0,-4.51545,-10 0/0:88.2765:26:26:965:0:0:0,-7.82678,-10 0/0:99:47:47:1743:0:0:0,-10,-10 0/0:99:36:36:1310:0:0:0,-10,-10 0/0:82.2562:24:24:879:0:0:0,-7.22472,-10 0/0:99:39:39:1421:0:0:0,-10,-10 0/0:94.2985:28:28:1058:0:0:0,-8.42884,-10 0/0:94.2985:28:28:1044:0:0:0,-8.42884,-10 0/0:79.246:23:23:858:0:0:0,-6.92369,-10 0/0:37.1018:9:9:341:0:0:0,-2.70927,-10 0/0:73.2254:21:21:769:0:0:0,-6.32163,-10 0/0:73.2254:22:21:788:0:0:0,-6.32163,-10 0/0:99:51:51:1876:0:0:0,-10,-10 0/0:99:34:34:1284:0:0:0,-10,-10 0/0:99:34:34:1269:0:0:0,-10,-10 0/0:99:38:38:1396:0:0:0,-10,-10 0/0:34.0915:8:8:282:0:0:0,-2.40824,-10 0/0:97.3044:29:29:1039:0:0:0,-8.72987,-10 0/0:64.1945:18:18:662:0:0:0,-5.41854,-10 0/0:25.0606:5:5:186:0:0:0,-1.50515,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:85.2664:25:25:945:0:0:0,-7.52575,-10 0/0:70.2151:21:20:728:0:0:0,-6.0206,-10 scaffold_259 870451 . G C 1531.36 . AB=0.585714;ABP=7.47733;AC=4;AF=0.0224719;AN=178;AO=59;CIGAR=1X;DP=2527;DPB=2527;DPRA=1.0343;EPP=3.0471;EPPR=31.2359;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9566;NS=89;NUMALT=1;ODDS=0.434014;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2151;QR=90253;RO=2465;RPP=131.127;RPPR=5072.89;RUN=1;SAF=30;SAP=3.0471;SAR=29;SRF=1152;SRP=25.8447;SRR=1313;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.7508:17:17:645:0:0:0,-5.11751,-10 0/0:73.7508:17:17:614:0:0:0,-5.11751,-10 0/0:97.8296:25:25:888:0:0:0,-7.52575,-10 0/0:82.7816:20:20:734:0:0:0,-6.0206,-10 0/0:76.7611:18:18:682:0:0:0,-5.41854,-10 0/0:70.7405:16:16:573:0:0:0,-4.81648,-10 0/0:99:52:52:1846:0:0:0,-10,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:76.7611:18:18:659:0:0:0,-5.41854,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:61.7096:13:13:483:0:0:0,-3.91339,-10 .:.:.:.:.:.:.:. 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:99:44:44:1605:0:0:0,-10,-10 0/0:99:26:26:980:0:0:0,-7.82678,-10 0/0:99:37:36:1336:0:0:0,-10,-10 0/0:61.7096:13:13:449:0:0:0,-3.91339,-10 0/0:99:38:38:1427:0:0:0,-10,-10 0/0:99:36:36:1326:0:0:0,-10,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/1:99:56:29:1091:27:999:-10,0,-10 0/0:55.689:11:11:401:0:0:0,-3.31133,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:70.7405:16:16:563:0:0:0,-4.81648,-10 0/0:67.7302:15:15:543:0:0:0,-4.51545,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:99:27:27:971:0:0:0,-8.12781,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:99:60:60:2214:0:0:0,-10,-10 0/0:49.6684:9:9:299:0:0:0,-2.70927,-10 0/0:64.7199:14:14:513:0:0:0,-4.21442,-10 0/0:94.8211:24:24:898:0:0:0,-7.22472,-10 0/0:73.7508:17:17:640:0:0:0,-5.11751,-10 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/0:67.7302:15:15:556:0:0:0,-4.51545,-10 0/0:76.7611:18:18:630:0:0:0,-5.41854,-10 0/0:99:49:49:1780:0:0:0,-10,-10 0/0:79.7714:19:19:694:0:0:0,-5.71957,-10 0/0:94.8211:24:24:876:0:0:0,-7.22472,-10 0/0:99:45:45:1635:0:0:0,-10,-10 0/0:85.7918:21:21:774:0:0:0,-6.32163,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:99:50:50:1871:0:0:0,-10,-10 0/1:0.00417494:14:0:0:14:505:-10,-4.21442,0 0/0:88.8019:22:22:821:0:0:0,-6.62266,-10 0/0:99:70:70:2564:0:0:0,-10,-10 0/0:99:42:42:1541:0:0:0,-10,-10 0/0:94.8211:24:24:863:0:0:0,-7.22472,-10 0/0:99:55:54:2017:0:0:0,-10,-10 0/0:73.7508:17:17:624:0:0:0,-5.11751,-10 0/0:99:54:54:1938:0:0:0,-10,-10 0/0:82.7816:20:20:696:0:0:0,-6.0206,-10 0/0:61.7096:13:13:462:0:0:0,-3.91339,-10 0/0:99:57:57:2052:0:0:0,-10,-10 0/0:91.8117:23:23:855:0:0:0,-6.92369,-10 0/0:99:27:27:948:0:0:0,-8.12781,-10 0/0:55.689:11:11:415:0:0:0,-3.31133,-10 0/0:85.7918:21:21:797:0:0:0,-6.32163,-10 0/0:70.7405:16:16:586:0:0:0,-4.81648,-10 0/0:99:39:39:1426:0:0:0,-10,-10 0/0:94.8211:24:24:880:0:0:0,-7.22472,-10 0/0:99:40:40:1468:0:0:0,-10,-10 0/0:99:31:31:1164:0:0:0,-9.33193,-10 0/0:99:28:28:1058:0:0:0,-8.42884,-10 0/0:99:41:41:1518:0:0:0,-10,-10 0/0:91.8117:23:23:813:0:0:0,-6.92369,-10 0/0:61.7096:13:13:448:0:0:0,-3.91339,-10 0/0:99:57:57:2130:0:0:0,-10,-10 0/0:67.7302:15:15:556:0:0:0,-4.51545,-10 0/0:99:26:26:956:0:0:0,-7.82678,-10 0/0:99:47:47:1746:0:0:0,-10,-10 0/0:99:36:36:1284:0:0:0,-10,-10 0/0:94.8211:24:24:841:0:0:0,-7.22472,-10 0/0:99:39:39:1438:0:0:0,-10,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:99:28:28:1045:0:0:0,-8.42884,-10 0/0:91.8117:23:23:839:0:0:0,-6.92369,-10 0/0:49.6684:9:9:340:0:0:0,-2.70927,-10 0/0:85.7918:21:21:736:0:0:0,-6.32163,-10 0/0:88.8019:22:22:805:0:0:0,-6.62266,-10 0/0:99:51:51:1888:0:0:0,-10,-10 0/0:99:34:34:1227:0:0:0,-10,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:99:38:38:1433:0:0:0,-10,-10 0/0:46.6581:8:8:303:0:0:0,-2.40824,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 1/1:4.05937:18:0:0:18:647:-10,-5.41854,0 0/0:37.6272:5:5:190:0:0:0,-1.50515,-10 0/0:99:35:34:1255:0:0:0,-10,-10 0/0:97.8296:25:25:937:0:0:0,-7.52575,-10 0/0:85.7918:21:21:732:0:0:0,-6.32163,-10 scaffold_259 870456 . C T 1470.8 . AB=0.608696;ABP=12.4515;AC=3;AF=0.0168539;AN=178;AO=61;CIGAR=1X;DP=2527;DPB=2527;DPRA=1.41056;EPP=3.90025;EPPR=24.4571;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9554;NS=89;NUMALT=1;ODDS=6.2641;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2165;QR=89680;RO=2464;RPP=135.47;RPPR=5353.52;RUN=1;SAF=28;SAP=3.90025;SAR=33;SRF=1154;SRP=24.4571;SRR=1310;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:63.3418:17:17:644:0:0:0,-5.11751,-10 0/0:63.3418:17:17:622:0:0:0,-5.11751,-10 0/0:87.4238:25:25:866:0:0:0,-7.52575,-10 0/0:72.3727:20:20:716:0:0:0,-6.0206,-10 0/0:66.3521:18:18:673:0:0:0,-5.41854,-10 0/0:57.3212:16:15:536:0:0:0,-4.51545,-10 0/0:99:52:51:1791:1:16:0,-10,-10 0/0:99:33:33:1218:0:0:0,-9.93399,-10 0/0:66.3521:18:18:682:0:0:0,-5.41854,-10 .:.:.:.:.:.:.:. .:.:.:.:.:.:.:. 0/0:51.3006:13:13:453:0:0:0,-3.91339,-10 .:.:.:.:.:.:.:. 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:99:44:44:1616:0:0:0,-10,-10 0/0:90.4336:26:26:965:0:0:0,-7.82678,-10 0/0:99:37:37:1379:0:0:0,-10,-10 0/0:51.3006:13:13:453:0:0:0,-3.91339,-10 0/0:99:38:38:1401:0:0:0,-10,-10 0/0:99:36:36:1315:0:0:0,-10,-10 0/0:64.6754:27:26:965:1:16:0,-5.09645,-10 0/0:99:56:56:2072:0:0:0,-10,-10 0/0:45.28:11:11:411:0:0:0,-3.31133,-10 0/0:99:35:35:1297:0:0:0,-10,-10 0/0:60.3315:16:16:593:0:0:0,-4.81648,-10 0/0:57.3212:15:15:563:0:0:0,-4.51545,-10 0/0:99:29:29:1033:0:0:0,-8.72987,-10 0/0:93.4431:27:27:985:0:0:0,-8.12781,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:99:60:59:2154:1:34:0,-10,-10 0/0:39.2594:9:9:311:0:0:0,-2.70927,-10 0/0:54.3109:14:14:527:0:0:0,-4.21442,-10 0/0:84.4137:24:24:900:0:0:0,-7.22472,-10 0/0:63.3418:17:17:621:0:0:0,-5.11751,-10 0/0:99:32:32:1131:0:0:0,-9.63296,-10 0/0:57.3212:15:15:526:0:0:0,-4.51545,-10 0/0:66.3521:18:18:653:0:0:0,-5.41854,-10 0/0:99:49:49:1764:0:0:0,-10,-10 0/0:69.3624:19:19:673:0:0:0,-5.71957,-10 0/0:84.4137:24:24:882:0:0:0,-7.22472,-10 0/0:99:45:45:1626:0:0:0,-10,-10 0/0:75.383:21:21:761:0:0:0,-6.32163,-10 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:99:50:50:1845:0:0:0,-10,-10 0/0:54.3109:14:14:495:0:0:0,-4.21442,-10 0/0:78.3932:22:22:828:0:0:0,-6.62266,-10 0/0:99:70:70:2566:0:0:0,-10,-10 0/0:99:42:42:1517:0:0:0,-10,-10 0/0:84.4137:24:24:876:0:0:0,-7.22472,-10 0/0:99:55:54:2008:0:0:0,-10,-10 0/0:63.3418:17:17:621:0:0:0,-5.11751,-10 0/0:99:54:53:1921:1:16:0,-10,-10 0/0:72.3727:20:20:745:0:0:0,-6.0206,-10 0/0:51.3006:13:13:404:0:0:0,-3.91339,-10 0/0:99:57:57:2052:0:0:0,-10,-10 0/0:81.4036:23:23:837:0:0:0,-6.92369,-10 0/0:93.4431:27:27:994:0:0:0,-8.12781,-10 0/0:45.28:11:11:409:0:0:0,-3.31133,-10 0/0:75.383:21:21:790:0:0:0,-6.32163,-10 0/0:60.3315:16:16:563:0:0:0,-4.81648,-10 0/0:99:39:39:1406:0:0:0,-10,-10 0/0:34.156:24:23:829:1:38:0,-2.04451,-10 0/0:99:40:40:1462:0:0:0,-10,-10 0/0:99:31:31:1157:0:0:0,-9.33193,-10 0/0:96.4561:28:28:1054:0:0:0,-8.42884,-10 0/0:99:41:41:1494:0:0:0,-10,-10 0/0:81.4036:23:23:805:0:0:0,-6.92369,-10 0/0:51.3006:13:13:482:0:0:0,-3.91339,-10 0/0:99:57:57:2094:0:0:0,-10,-10 0/0:57.3212:15:15:532:0:0:0,-4.51545,-10 0/0:90.4336:26:26:960:0:0:0,-7.82678,-10 0/0:99:47:47:1738:0:0:0,-10,-10 0/0:99:36:36:1289:0:0:0,-10,-10 0/0:84.4137:24:24:881:0:0:0,-7.22472,-10 0/0:99:39:39:1394:0:0:0,-10,-10 0/0:96.4561:28:28:989:0:0:0,-8.42884,-10 0/0:96.4561:28:28:1002:0:0:0,-8.42884,-10 0/1:0.00109749:23:1:38:22:806:-10,-1.76196,0 0/0:39.2594:9:9:335:0:0:0,-2.70927,-10 0/0:75.383:21:21:745:0:0:0,-6.32163,-10 0/0:78.3932:22:22:783:0:0:0,-6.62266,-10 0/0:99:51:51:1876:0:0:0,-10,-10 0/1:99:34:17:613:17:634:-10,0,-10 0/0:99:34:34:1268:0:0:0,-10,-10 0/0:99:38:38:1405:0:0:0,-10,-10 0/0:36.2491:8:8:304:0:0:0,-2.40824,-10 0/0:99:29:29:992:0:0:0,-8.72987,-10 0/0:66.3521:18:18:657:0:0:0,-5.41854,-10 0/0:27.2182:5:5:184:0:0:0,-1.50515,-10 0/1:99:35:18:634:17:605:-10,0,-10 0/0:87.4238:25:25:883:0:0:0,-7.52575,-10 0/0:75.383:21:21:763:0:0:0,-6.32163,-10 scaffold_259 872197 . G T 772.673 . AB=0.492754;ABP=3.04177;AC=4;AF=0.0217391;AN=184;AO=36;CIGAR=1X;DP=1522;DPB=1522;DPRA=1.41781;EPP=5.18177;EPPR=3.03368;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9818;NS=92;NUMALT=1;ODDS=5.92402;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1232;QR=53708;RO=1486;RPP=81.1833;RPPR=3203.81;RUN=1;SAF=21;SAP=5.18177;SAR=15;SRF=744;SRP=3.01615;SRR=742;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.924:16:16:574:0:0:0,-4.81648,-10 0/0:34.8004:4:4:140:0:0:0,-1.20412,-10 0/0:55.8725:11:11:404:0:0:0,-3.31133,-10 0/0:61.8931:13:13:491:0:0:0,-3.91339,-10 0/0:40.821:6:6:223:0:0:0,-1.80618,-10 0/0:52.8622:10:10:380:0:0:0,-3.0103,-10 0/0:99:36:36:1340:0:0:0,-10,-10 0/0:91.9958:23:23:858:0:0:0,-6.92369,-10 0/0:70.924:16:16:577:0:0:0,-4.81648,-10 0/0:31.7901:3:3:99:0:0:0,-0.90309,-9.24 0/0:46.8416:8:8:266:0:0:0,-2.40824,-10 0/0:37.8107:5:5:187:0:0:0,-1.50515,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:99:28:28:990:0:0:0,-8.42884,-10 0/0:79.9549:19:19:662:0:0:0,-5.71957,-10 0/1:69.2558:13:9:331:4:117:-9.76342,0,-10 0/0:79.9549:19:19:699:0:0:0,-5.71957,-10 0/0:73.9343:17:17:599:0:0:0,-5.11751,-10 0/0:67.9137:15:15:564:0:0:0,-4.51545,-10 0/0:99:50:49:1718:1:16:0,-10,-10 0/0:58.8828:12:12:377:0:0:0,-3.61236,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/0:43.8313:7:7:259:0:0:0,-2.10721,-10 0/0:91.9958:23:23:870:0:0:0,-6.92369,-10 0/0:67.9137:15:15:525:0:0:0,-4.51545,-10 0/0:76.9445:18:18:678:0:0:0,-5.41854,-10 0/0:70.924:16:16:581:0:0:0,-4.81648,-10 0/0:52.8622:10:10:365:0:0:0,-3.0103,-10 0/0:67.9137:15:15:561:0:0:0,-4.51545,-10 0/0:99:33:33:1176:0:0:0,-9.93399,-10 0/0:37.8107:5:5:161:0:0:0,-1.50515,-10 0/0:46.8416:8:8:267:0:0:0,-2.40824,-10 0/0:55.8725:11:11:396:0:0:0,-3.31133,-10 0/0:55.8725:11:11:396:0:0:0,-3.31133,-10 0/0:79.9549:19:19:644:0:0:0,-5.71957,-10 0/0:52.8622:10:10:365:0:0:0,-3.0103,-10 0/1:0.0020441:10:0:0:10:360:-10,-3.0103,0 0/0:79.9549:19:19:689:0:0:0,-5.71957,-10 0/0:64.9034:14:14:495:0:0:0,-4.21442,-10 0/1:26.3754:12:10:369:2:68:-4.66718,0,-10 0/0:98.0155:25:25:914:0:0:0,-7.52575,-10 0/0:82.9652:20:20:726:0:0:0,-6.0206,-10 0/0:64.9034:14:14:530:0:0:0,-4.21442,-10 0/1:99:34:16:564:18:646:-10,0,-10 0/0:79.9549:19:19:699:0:0:0,-5.71957,-10 0/0:67.9137:15:15:565:0:0:0,-4.51545,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:76.9445:18:18:587:0:0:0,-5.41854,-10 0/0:43.8313:7:7:264:0:0:0,-2.10721,-10 0/0:99:34:34:1187:0:0:0,-10,-10 0/0:73.9343:17:17:616:0:0:0,-5.11751,-10 0/0:99:30:30:1099:0:0:0,-9.0309,-10 0/0:46.8416:8:8:289:0:0:0,-2.40824,-10 0/0:25.7695:1:1:38:0:0:0,-0.30103,-3.8 0/0:99:34:34:1249:0:0:0,-10,-10 0/0:70.924:16:16:594:0:0:0,-4.81648,-10 0/0:73.9343:17:17:637:0:0:0,-5.11751,-10 0/0:40.821:6:6:223:0:0:0,-1.80618,-10 0/0:61.8931:13:13:491:0:0:0,-3.91339,-10 0/0:43.8313:7:7:249:0:0:0,-2.10721,-10 0/0:85.9754:21:21:724:0:0:0,-6.32163,-10 0/0:42.8399:18:17:619:1:25:0,-1.66327,-10 0/0:99:34:34:1235:0:0:0,-10,-10 0/0:76.9445:18:18:658:0:0:0,-5.41854,-10 0/0:52.8622:10:10:364:0:0:0,-3.0103,-10 0/0:79.9549:19:19:709:0:0:0,-5.71957,-10 0/0:58.8828:12:12:431:0:0:0,-3.61236,-10 0/0:52.8622:10:10:379:0:0:0,-3.0103,-10 0/0:99:41:41:1421:0:0:0,-10,-10 0/0:49.8519:9:9:342:0:0:0,-2.70927,-10 0/0:73.9343:17:17:606:0:0:0,-5.11751,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:73.9343:17:17:599:0:0:0,-5.11751,-10 0/0:52.8622:10:10:372:0:0:0,-3.0103,-10 0/0:82.9652:20:20:712:0:0:0,-6.0206,-10 0/0:73.9343:17:17:642:0:0:0,-5.11751,-10 0/0:55.8725:11:11:372:0:0:0,-3.31133,-10 0/0:43.8313:7:7:237:0:0:0,-2.10721,-10 0/0:31.7901:3:3:86:0:0:0,-0.90309,-8.02667 0/0:55.8725:11:11:394:0:0:0,-3.31133,-10 0/0:99:28:28:970:0:0:0,-8.42884,-10 0/0:99:28:28:1053:0:0:0,-8.42884,-10 0/0:76.9445:18:18:675:0:0:0,-5.41854,-10 0/0:85.9754:21:21:777:0:0:0,-6.32163,-10 0/0:58.8828:12:12:450:0:0:0,-3.61236,-10 0/0:34.8004:4:4:128:0:0:0,-1.20412,-10 0/0:61.8931:13:13:481:0:0:0,-3.91339,-10 0/0:73.9343:17:17:597:0:0:0,-5.11751,-10 0/0:28.7798:2:2:65:0:0:0,-0.60206,-6.175 0/0:64.9034:14:14:496:0:0:0,-4.21442,-10 0/0:55.8725:11:11:391:0:0:0,-3.31133,-10 0/0:61.8931:13:13:470:0:0:0,-3.91339,-10 scaffold_259 872239 . T C 32.8064 . AB=0.21519;ABP=58.6715;AC=5;AF=0.0271739;AN=184;AO=96;CIGAR=2X;DP=1710;DPB=1710;DPRA=1.78988;EPP=211.472;EPPR=3.70083;GTI=20;LEN=1;MEANALT=2;MQM=37.3333;MQMR=59.9823;NS=92;NUMALT=1;ODDS=0.128075;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2869;QR=55610;RO=1522;RPP=211.472;RPPR=3281.99;RUN=1;SAF=0;SAP=211.472;SAR=96;SRF=747;SRP=4.12885;SRR=775;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:97.2234:16:16:576:0:0:0,-4.81648,-10 0|0:58.0954:4:3:113:0:0:0,-0.90309,-10 0|0:62.9713:12:11:394:1:16:0,-0.933179,-10 0|0:88.1976:15:13:493:0:0:0,-3.91339,-10 0|0:67.1262:6:6:226:0:0:0,-1.80618,-10 0|0:0.000450353:11:9:327:1:37:-1.3797,0,-10 0|0:77.8179:39:35:1312:2:71:0,-1.93714,-10 0|0:60.0079:27:23:839:2:54:0,-0.156129,-10 0|0:97.2234:18:16:593:0:0:0,-4.81648,-10 0|0:58.0954:3:3:99:0:0:0,-0.90309,-9.24 0|0:73.1468:9:8:297:0:0:0,-2.40824,-10 0|0:64.116:5:5:187:0:0:0,-1.50515,-10 0|0:99:33:31:1130:1:38:0,-4.70281,-10 0|0:1.74066e-05:31:28:1025:2:76:-0.447589,0,-10 0|0:99:19:19:706:0:0:0,-5.71957,-10 0|0:0.170755:17:13:488:2:76:-4.43074,0,-10 0|0:67.6336:21:20:748:1:36:0,-1.39941,-10 0|0:59.2722:18:17:611:1:36:0,-0.563267,-10 0|0:94.216:15:15:568:0:0:0,-4.51545,-10 0|0:99:52:47:1705:1:36:0,-9.5087,-10 0|0:82.1776:13:11:374:0:0:0,-3.31133,-10 0|0:97.8385:33:30:1104:1:38:0,-4.42057,-10 0|0:0.00398433:10:7:266:2:45:-2.80703,0,-10 0|0:99:20:20:752:0:0:0,-6.0206,-10 0|0:56.1131:18:15:539:1:37:0,-0.24736,-10 0|0:99:21:19:699:0:0:0,-5.71957,-10 0|0:76.5101:17:16:605:1:16:0,-2.28706,-10 0|0:0.0108605:12:10:360:2:53:-3.24218,0,-10 0|0:0.0514901:20:15:552:2:76:-3.91603,0,-10 0|0:99:34:32:1206:0:0:0,-9.63296,-10 0|0:64.116:6:5:170:0:0:0,-1.50515,-10 0|0:0.00707494:11:8:294:2:50:-3.05625,0,-10 0|0:82.1776:11:11:414:0:0:0,-3.31133,-10 0|0:82.1776:12:11:399:0:0:0,-3.31133,-10 0|0:0.00568014:22:20:726:2:76:-2.96095,0,-10 0|1:32.5991:16:9:332:5:129:-10,0,-10 0|0:0.000636686:11:10:351:1:38:-1.53006,0,-10 0|0:66.8352:20:19:695:1:34:0,-1.31957,-10 0|0:73.7331:16:14:524:1:16:0,-2.00936,-10 0|0:0.283181:16:12:422:3:78:-5.14756,0,-10 0|0:99:26:25:901:0:0:0,-7.52575,-10 0|0:65.6336:21:20:725:1:38:0,-1.19941,-10 0|1:8.30179:19:14:527:3:91:-5.913,0,-10 0|0:0.00196259:38:34:1218:3:113:-3.00231,0,-10 0|0:78.9851:21:19:696:1:25:0,-2.53457,-10 0|0:94.216:15:15:553:0:0:0,-4.51545,-10 0|0:99:41:37:1360:1:38:0,-6.41852,-10 0|0:99:18:18:645:0:0:0,-5.41854,-10 0|0:70.1365:8:7:265:0:0:0,-2.10721,-10 0|0:0.899478:39:33:1237:5:137:-6.68651,0,-10 0|0:2.64684e-05:22:17:607:3:47:-1.1323,0,-10 0|0:61.2464:34:30:1092:2:74:0,-0.279978,-10 0|0:76.1571:10:9:340:0:0:0,-2.70927,-10 0|1:8.41436:3:1:38:2:61:-5.36903,0,-3.37403 0|0:99:38:36:1309:1:38:0,-6.14991,-10 0|0:99:18:18:659:0:0:0,-5.41854,-10 0|0:79.2721:18:17:615:1:16:0,-2.56327,-10 0|0:67.1262:6:6:212:0:0:0,-1.80618,-10 0|0:88.1976:13:13:494:0:0:0,-3.91339,-10 0|0:70.1365:7:7:232:0:0:0,-2.10721,-10 0|0:0.00249287:24:20:725:2:76:-2.60345,0,-10 0|0:0.0103331:21:19:680:2:76:-3.22059,0,-10 0|0:0.0936388:39:35:1271:4:130:-5.19997,0,-10 0|0:99:21:20:727:0:0:0,-6.0206,-10 0|0:79.1675:11:10:345:0:0:0,-3.0103,-10 0|1:26.087:24:19:688:4:126:-8.3195,0,-10 0|0:0.241603:15:12:420:2:75:-4.57795,0,-10 0|0:76.1571:10:9:324:0:0:0,-2.70927,-10 0|0:77.2399:44:41:1451:3:83:0,-1.37663,-10 0|0:76.1571:9:9:335:0:0:0,-2.70927,-10 0|0:99:20:17:641:0:0:0,-5.11751,-10 0|0:0.0170028:33:28:1003:4:107:-4.46286,0,-10 0|0:78.8435:19:16:580:1:16:0,-2.52039,-10 0|0:0.000214901:13:10:373:1:37:-1.0584,0,-10 0|0:90.3324:22:20:743:1:16:0,-3.66941,-10 0|0:99:20:17:619:0:0:0,-5.11751,-10 0|0:0.00014644:13:11:400:1:38:-0.891821,0,-10 0|0:70.1365:9:7:253:0:0:0,-2.10721,-10 0|0:58.0954:3:3:95:0:0:0,-0.90309,-8.86667 0|0:82.1776:11:11:418:0:0:0,-3.31133,-10 0|0:81.9279:35:30:1081:2:51:0,-2.34814,-10 0|0:99:31:28:1040:1:16:0,-5.90081,-10 0|0:97.2234:17:16:582:0:0:0,-4.81648,-10 0|0:93.706:24:21:775:1:15:0,-4.0069,-10 0|0:65.4213:13:11:417:1:16:0,-1.17818,-10 0|0:61.1057:4:4:149:0:0:0,-1.20412,-10 0|1:9.80748:17:13:474:3:91:-6.06421,0,-10 0|0:57.2722:18:17:613:1:38:0,-0.363267,-10 0|0:55.0851:2:2:75:0:0:0,-0.60206,-7.125 0|0:91.2072:14:14:520:0:0:0,-4.21442,-10 0|0:58.9713:14:11:394:1:22:0,-0.533179,-10 0|0:88.1976:15:13:453:0:0:0,-3.91339,-10 scaffold_259 872240 . G T 32.8064 . AB=0.21519;ABP=58.6715;AC=5;AF=0.0271739;AN=184;AO=96;CIGAR=2X;DP=1710;DPB=1710;DPRA=1.78988;EPP=211.472;EPPR=3.70083;GTI=20;LEN=1;MEANALT=2;MQM=37.3333;MQMR=59.9823;NS=92;NUMALT=1;ODDS=0.128075;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2869;QR=55610;RO=1522;RPP=211.472;RPPR=3281.99;RUN=1;SAF=0;SAP=211.472;SAR=96;SRF=747;SRP=4.12885;SRR=775;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:97.2234:16:16:576:0:0:0,-4.81648,-10 0|0:58.0954:4:3:113:0:0:0,-0.90309,-10 0|0:62.9713:12:11:394:1:16:0,-0.933179,-10 0|0:88.1976:15:13:493:0:0:0,-3.91339,-10 0|0:67.1262:6:6:226:0:0:0,-1.80618,-10 0|0:0.000450353:11:9:327:1:37:-1.3797,0,-10 0|0:77.8179:39:35:1312:2:71:0,-1.93714,-10 0|0:60.0079:27:23:839:2:54:0,-0.156129,-10 0|0:97.2234:18:16:593:0:0:0,-4.81648,-10 0|0:58.0954:3:3:99:0:0:0,-0.90309,-9.24 0|0:73.1468:9:8:297:0:0:0,-2.40824,-10 0|0:64.116:5:5:187:0:0:0,-1.50515,-10 0|0:99:33:31:1130:1:38:0,-4.70281,-10 0|0:1.74066e-05:31:28:1025:2:76:-0.447589,0,-10 0|0:99:19:19:706:0:0:0,-5.71957,-10 0|0:0.170755:17:13:488:2:76:-4.43074,0,-10 0|0:67.6336:21:20:748:1:36:0,-1.39941,-10 0|0:59.2722:18:17:611:1:36:0,-0.563267,-10 0|0:94.216:15:15:568:0:0:0,-4.51545,-10 0|0:99:52:47:1705:1:36:0,-9.5087,-10 0|0:82.1776:13:11:374:0:0:0,-3.31133,-10 0|0:97.8385:33:30:1104:1:38:0,-4.42057,-10 0|0:0.00398433:10:7:266:2:45:-2.80703,0,-10 0|0:99:20:20:752:0:0:0,-6.0206,-10 0|0:56.1131:18:15:539:1:37:0,-0.24736,-10 0|0:99:21:19:699:0:0:0,-5.71957,-10 0|0:76.5101:17:16:605:1:16:0,-2.28706,-10 0|0:0.0108605:12:10:360:2:53:-3.24218,0,-10 0|0:0.0514901:20:15:552:2:76:-3.91603,0,-10 0|0:99:34:32:1206:0:0:0,-9.63296,-10 0|0:64.116:6:5:170:0:0:0,-1.50515,-10 0|0:0.00707494:11:8:294:2:50:-3.05625,0,-10 0|0:82.1776:11:11:414:0:0:0,-3.31133,-10 0|0:82.1776:12:11:399:0:0:0,-3.31133,-10 0|0:0.00568014:22:20:726:2:76:-2.96095,0,-10 0|1:32.5991:16:9:332:5:129:-10,0,-10 0|0:0.000636686:11:10:351:1:38:-1.53006,0,-10 0|0:66.8352:20:19:695:1:34:0,-1.31957,-10 0|0:73.7331:16:14:524:1:16:0,-2.00936,-10 0|0:0.283181:16:12:422:3:78:-5.14756,0,-10 0|0:99:26:25:901:0:0:0,-7.52575,-10 0|0:65.6336:21:20:725:1:38:0,-1.19941,-10 0|1:8.30179:19:14:527:3:91:-5.913,0,-10 0|0:0.00196259:38:34:1218:3:113:-3.00231,0,-10 0|0:78.9851:21:19:696:1:25:0,-2.53457,-10 0|0:94.216:15:15:553:0:0:0,-4.51545,-10 0|0:99:41:37:1360:1:38:0,-6.41852,-10 0|0:99:18:18:645:0:0:0,-5.41854,-10 0|0:70.1365:8:7:265:0:0:0,-2.10721,-10 0|0:0.899478:39:33:1237:5:137:-6.68651,0,-10 0|0:2.64684e-05:22:17:607:3:47:-1.1323,0,-10 0|0:61.2464:34:30:1092:2:74:0,-0.279978,-10 0|0:76.1571:10:9:340:0:0:0,-2.70927,-10 0|1:8.41436:3:1:38:2:61:-5.36903,0,-3.37403 0|0:99:38:36:1309:1:38:0,-6.14991,-10 0|0:99:18:18:659:0:0:0,-5.41854,-10 0|0:79.2721:18:17:615:1:16:0,-2.56327,-10 0|0:67.1262:6:6:212:0:0:0,-1.80618,-10 0|0:88.1976:13:13:494:0:0:0,-3.91339,-10 0|0:70.1365:7:7:232:0:0:0,-2.10721,-10 0|0:0.00249287:24:20:725:2:76:-2.60345,0,-10 0|0:0.0103331:21:19:680:2:76:-3.22059,0,-10 0|0:0.0936388:39:35:1271:4:130:-5.19997,0,-10 0|0:99:21:20:727:0:0:0,-6.0206,-10 0|0:79.1675:11:10:345:0:0:0,-3.0103,-10 0|1:26.087:24:19:688:4:126:-8.3195,0,-10 0|0:0.241603:15:12:420:2:75:-4.57795,0,-10 0|0:76.1571:10:9:324:0:0:0,-2.70927,-10 0|0:77.2399:44:41:1451:3:83:0,-1.37663,-10 0|0:76.1571:9:9:335:0:0:0,-2.70927,-10 0|0:99:20:17:641:0:0:0,-5.11751,-10 0|0:0.0170028:33:28:1003:4:107:-4.46286,0,-10 0|0:78.8435:19:16:580:1:16:0,-2.52039,-10 0|0:0.000214901:13:10:373:1:37:-1.0584,0,-10 0|0:90.3324:22:20:743:1:16:0,-3.66941,-10 0|0:99:20:17:619:0:0:0,-5.11751,-10 0|0:0.00014644:13:11:400:1:38:-0.891821,0,-10 0|0:70.1365:9:7:253:0:0:0,-2.10721,-10 0|0:58.0954:3:3:95:0:0:0,-0.90309,-8.86667 0|0:82.1776:11:11:418:0:0:0,-3.31133,-10 0|0:81.9279:35:30:1081:2:51:0,-2.34814,-10 0|0:99:31:28:1040:1:16:0,-5.90081,-10 0|0:97.2234:17:16:582:0:0:0,-4.81648,-10 0|0:93.706:24:21:775:1:15:0,-4.0069,-10 0|0:65.4213:13:11:417:1:16:0,-1.17818,-10 0|0:61.1057:4:4:149:0:0:0,-1.20412,-10 0|1:9.80748:17:13:474:3:91:-6.06421,0,-10 0|0:57.2722:18:17:613:1:38:0,-0.363267,-10 0|0:55.0851:2:2:75:0:0:0,-0.60206,-7.125 0|0:91.2072:14:14:520:0:0:0,-4.21442,-10 0|0:58.9713:14:11:394:1:22:0,-0.533179,-10 0|0:88.1976:15:13:453:0:0:0,-3.91339,-10 scaffold_259 901114 . T C 1474.35 . AB=0.701754;ABP=23.1631;AC=5;AF=0.0271739;AN=184;AO=59;CIGAR=1X;DP=1811;DPB=1811;DPRA=1.0385;EPP=3.0471;EPPR=7.47733;GTI=1;LEN=1;MEANALT=1;MQM=59.7458;MQMR=59.9177;NS=92;NUMALT=1;ODDS=1.7779;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2132;QR=64059;RO=1750;RPP=131.127;RPPR=3803.09;RUN=1;SAF=29;SAP=3.0471;SAR=30;SRF=905;SRP=7.47733;SRR=845;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:35.4196:7:7:263:0:0:0,-2.10721,-10 0/0:56.4917:14:14:514:0:0:0,-4.21442,-10 0/0:98.6304:28:28:1016:0:0:0,-8.42884,-10 0/0:41.4402:9:9:341:0:0:0,-2.70927,-10 0/0:44.4505:10:10:368:0:0:0,-3.0103,-10 0/0:41.4402:9:9:341:0:0:0,-2.70927,-10 0/0:95.6229:27:27:1011:0:0:0,-8.12781,-10 0/0:99:39:38:1367:0:0:0,-10,-10 0/0:59.502:15:15:570:0:0:0,-4.51545,-10 0/0:23.3784:3:3:114:0:0:0,-0.90309,-10 0/0:50.4711:12:12:426:0:0:0,-3.61236,-10 0/0:41.4402:9:9:335:0:0:0,-2.70927,-10 0/0:92.6139:26:26:929:0:0:0,-7.82678,-10 0/0:99:36:36:1268:0:0:0,-10,-10 0/0:74.5535:20:20:754:0:0:0,-6.0206,-10 0/0:98.6304:28:28:987:0:0:0,-8.42884,-10 0/0:74.5535:20:20:749:0:0:0,-6.0206,-10 0/0:35.4196:7:7:230:0:0:0,-2.10721,-10 0/0:56.4917:14:14:497:0:0:0,-4.21442,-10 0/0:99:42:42:1534:0:0:0,-10,-10 0/0:59.502:15:15:563:0:0:0,-4.51545,-10 0/0:89.6052:25:25:904:0:0:0,-7.52575,-10 0/0:53.4814:13:13:494:0:0:0,-3.91339,-10 0/0:86.5944:24:24:910:0:0:0,-7.22472,-10 0/0:71.5432:19:19:675:0:0:0,-5.71957,-10 0/0:80.574:22:22:822:0:0:0,-6.62266,-10 0/0:68.5329:18:18:672:0:0:0,-5.41854,-10 0/0:65.5226:17:17:595:0:0:0,-5.11751,-10 0/0:80.574:22:22:828:0:0:0,-6.62266,-10 0/0:99:36:36:1341:0:0:0,-10,-10 0/0:35.4196:7:7:266:0:0:0,-2.10721,-10 0/0:32.4093:6:6:219:0:0:0,-1.80618,-10 0/0:80.574:22:22:828:0:0:0,-6.62266,-10 0/0:68.5329:18:18:680:0:0:0,-5.41854,-10 0/0:77.5638:21:21:773:0:0:0,-6.32163,-10 0/0:44.4505:10:10:372:0:0:0,-3.0103,-10 0/0:47.4608:12:11:408:0:0:0,-3.31133,-10 0/0:99:35:35:1278:0:0:0,-10,-10 0/0:35.4196:7:7:262:0:0:0,-2.10721,-10 0/0:56.4917:14:14:495:0:0:0,-4.21442,-10 0/0:89.6052:25:25:929:0:0:0,-7.52575,-10 0/0:80.574:22:22:822:0:0:0,-6.62266,-10 0/0:86.5944:24:24:875:0:0:0,-7.22472,-10 0/0:99:30:30:1070:0:0:0,-9.0309,-10 0/0:86.5944:24:24:867:0:0:0,-7.22472,-10 0/0:32.4093:6:6:201:0:0:0,-1.80618,-10 0/0:99:44:44:1596:0:0:0,-10,-10 0/0:92.6139:26:26:979:0:0:0,-7.82678,-10 0/0:62.5123:16:16:602:0:0:0,-4.81648,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:59.502:15:15:550:0:0:0,-4.51545,-10 0/0:99:38:38:1394:0:0:0,-10,-10 0/0:35.4196:7:7:244:0:0:0,-2.10721,-10 0/0:44.4505:10:10:348:0:0:0,-3.0103,-10 0/0:99:45:45:1613:0:0:0,-10,-10 0/0:44.4505:10:10:357:0:0:0,-3.0103,-10 0/0:99:29:29:1036:0:0:0,-8.72987,-10 0/0:35.4196:7:7:265:0:0:0,-2.10721,-10 0/0:71.5432:19:19:714:0:0:0,-5.71957,-10 0/0:62.5123:16:16:599:0:0:0,-4.81648,-10 0/0:74.5535:20:20:757:0:0:0,-6.0206,-10 0/0:44.4505:10:10:372:0:0:0,-3.0103,-10 0/0:99:42:42:1503:0:0:0,-10,-10 0/0:69.4691:27:26:947:1:15:0,-5.19645,-10 0/0:44.4505:10:10:365:0:0:0,-3.0103,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:83.5842:23:23:834:0:0:0,-6.92369,-10 0/0:56.4917:14:14:521:0:0:0,-4.21442,-10 0/1:99:27:10:356:17:631:-10,0,-10 1/1:8.94339:18:0:0:18:648:-10,-5.41854,0 0/0:35.4196:7:7:240:0:0:0,-2.10721,-10 0/0:95.6229:27:27:1020:0:0:0,-8.12781,-10 0/0:95.6229:27:27:997:0:0:0,-8.12781,-10 0/0:80.574:22:22:822:0:0:0,-6.62266,-10 0/0:86.5944:24:24:884:0:0:0,-7.22472,-10 0/1:0.435536:15:0:0:15:538:-10,-4.51545,0 0/0:74.5535:20:20:726:0:0:0,-6.0206,-10 0/0:74.5535:20:20:703:0:0:0,-6.0206,-10 0/0:26.3887:4:4:152:0:0:0,-1.20412,-10 0/0:20.3681:2:2:75:0:0:0,-0.60206,-7.125 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:92.6139:26:26:931:0:0:0,-7.82678,-10 0/0:98.6304:28:28:993:0:0:0,-8.42884,-10 0/0:59.502:15:15:567:0:0:0,-4.51545,-10 0/1:99:15:7:265:8:300:-10,0,-10 0/0:26.3887:4:4:128:0:0:0,-1.20412,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:62.5123:16:16:568:0:0:0,-4.81648,-10 0/0:35.4196:7:7:259:0:0:0,-2.10721,-10 0/0:56.4917:14:14:526:0:0:0,-4.21442,-10 0/0:68.5329:18:18:670:0:0:0,-5.41854,-10 0/0:74.5535:20:20:743:0:0:0,-6.0206,-10 scaffold_278 228191 . G A 4635.71 . AB=0.746835;ABP=44.818;AC=14;AF=0.076087;AN=184;AO=175;CIGAR=1X;DP=2197;DPB=2197;DPRA=0.998329;EPP=3.61831;EPPR=4.4021;GTI=4;LEN=1;MEANALT=1;MQM=59.9029;MQMR=59.9733;NS=92;NUMALT=1;ODDS=2.45412;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6341;QR=74222;RO=2022;RPP=383.018;RPPR=4385.05;RUN=1;SAF=91;SAP=3.61831;SAR=84;SRF=992;SRP=4.56104;SRR=1030;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.00237463:16:1:28:15:517:-10,-0.81236,0 0/0:44.344:12:12:431:0:0:0,-3.61236,-10 1/1:31.1625:22:0:0:22:800:-10,-6.62266,0 0/1:0.0909678:9:0:0:9:341:-10,-2.70927,0 0/0:56.3852:16:16:608:0:0:0,-4.81648,-10 0/0:56.3852:16:16:551:0:0:0,-4.81648,-10 0/0:99:57:56:2073:1:16:0,-10,-10 0/0:95.5162:29:29:1058:0:0:0,-8.72987,-10 0/0:38.3234:10:10:378:0:0:0,-3.0103,-10 0/0:20.2616:4:4:139:0:0:0,-1.20412,-10 0/0:32.3028:8:8:304:0:0:0,-2.40824,-10 0/0:32.3028:8:8:302:0:0:0,-2.40824,-10 0/0:99:38:38:1380:0:0:0,-10,-10 0/0:99:52:52:1854:0:0:0,-10,-10 0/0:99:40:40:1433:0:0:0,-10,-10 0/0:86.4883:26:26:937:0:0:0,-7.82678,-10 0/0:78.7748:33:32:1162:1:16:0,-6.81548,-10 0/0:35.3131:9:9:339:0:0:0,-2.70927,-10 0/0:99:41:41:1527:0:0:0,-10,-10 0/0:99:45:45:1653:0:0:0,-10,-10 0/0:71.4367:21:21:772:0:0:0,-6.32163,-10 0/1:99:39:18:659:21:761:-10,0,-10 0/0:44.344:12:12:434:0:0:0,-3.61236,-10 0/0:99:33:33:1216:0:0:0,-9.93399,-10 0/0:86.4883:26:26:970:0:0:0,-7.82678,-10 0/0:99:41:41:1496:0:0:0,-10,-10 0/0:98.5235:30:30:1112:0:0:0,-9.0309,-10 0/0:62.4058:18:18:678:0:0:0,-5.41854,-10 0/0:77.4573:23:23:848:0:0:0,-6.92369,-10 0/0:99:43:43:1567:0:0:0,-10,-10 0/0:32.3028:8:8:304:0:0:0,-2.40824,-10 0/0:26.2822:6:6:226:0:0:0,-1.80618,-10 1/1:37.1831:24:0:0:24:908:-10,-7.22472,0 0/0:26.2822:6:6:221:0:0:0,-1.80618,-10 0/0:86.4883:26:26:984:0:0:0,-7.82678,-10 0/1:0.0112673:6:0:0:6:228:-10,-1.80618,0 0/0:35.3131:9:9:326:0:0:0,-2.70927,-10 0/0:99:43:43:1628:0:0:0,-10,-10 0/0:53.3749:15:15:547:0:0:0,-4.51545,-10 0/0:41.3337:11:11:400:0:0:0,-3.31133,-10 0/0:62.4058:18:18:659:0:0:0,-5.41854,-10 0/0:92.5073:28:28:1039:0:0:0,-8.42884,-10 0/0:65.4161:19:19:711:0:0:0,-5.71957,-10 0/0:83.4777:25:25:864:0:0:0,-7.52575,-10 0/0:99:32:32:1184:0:0:0,-9.63296,-10 0/0:59.3955:17:17:608:0:0:0,-5.11751,-10 0/0:99:36:36:1341:0:0:0,-10,-10 0/0:47.3543:13:13:466:0:0:0,-3.91339,-10 0/0:68.4264:20:20:743:0:0:0,-6.0206,-10 0/0:99:65:65:2359:0:0:0,-10,-10 0/0:50.3646:14:14:504:0:0:0,-4.21442,-10 0/0:99:37:37:1377:0:0:0,-10,-10 0/0:47.3543:13:13:494:0:0:0,-3.91339,-10 0/0:65.4161:19:19:710:0:0:0,-5.71957,-10 0/0:99:41:41:1493:0:0:0,-10,-10 0/0:80.4677:24:24:871:0:0:0,-7.22472,-10 0/0:92.5073:28:28:1052:0:0:0,-8.42884,-10 0/0:44.344:12:12:455:0:0:0,-3.61236,-10 0/0:56.3852:16:16:584:0:0:0,-4.81648,-10 0/0:41.3337:11:11:415:0:0:0,-3.31133,-10 0/0:99:38:38:1392:0:0:0,-10,-10 0/0:45.4369:28:27:998:1:35:0,-3.48168,-10 0/0:99:40:40:1492:0:0:0,-10,-10 0/0:65.4161:19:19:712:0:0:0,-5.71957,-10 0/0:38.3234:10:10:380:0:0:0,-3.0103,-10 0/0:99:50:50:1839:0:0:0,-10,-10 0/0:89.4978:27:27:988:0:0:0,-8.12781,-10 0/0:50.3646:14:14:467:0:0:0,-4.21442,-10 0/0:99:42:42:1527:0:0:0,-10,-10 0/0:59.3955:17:17:643:0:0:0,-5.11751,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:99:31:31:1111:0:0:0,-9.33193,-10 0/0:53.3749:15:15:543:0:0:0,-4.51545,-10 0/0:68.4264:20:20:758:0:0:0,-6.0206,-10 0/0:99:40:40:1502:0:0:0,-10,-10 0/0:62.4058:18:18:641:0:0:0,-5.41854,-10 0/0:65.4161:19:19:688:0:0:0,-5.71957,-10 0/0:77.4573:23:23:840:0:0:0,-6.92369,-10 0/1:0.00563:5:0:0:5:190:-10,-1.50515,0 0/0:62.4058:18:18:677:0:0:0,-5.41854,-10 1/1:91.3673:42:0:0:42:1506:-10,-10,0 0/0:99:50:50:1848:0:0:0,-10,-10 0/0:99:35:35:1320:0:0:0,-10,-10 1/1:40.1934:25:0:0:25:912:-10,-7.52575,0 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:23.2719:5:5:190:0:0:0,-1.50515,-10 0/0:11.2307:1:1:38:0:0:0,-0.30103,-3.8 0/0:89.4978:27:27:921:0:0:0,-8.12781,-10 0/1:72.7531:4:1:38:3:111:-9.75794,0,-3.19794 0/0:59.3955:17:17:619:0:0:0,-5.11751,-10 0/0:71.4367:21:21:772:0:0:0,-6.32163,-10 0/0:38.3234:10:10:356:0:0:0,-3.0103,-10 scaffold_278 256117 . G A 443.46 . AB=0.435897;ABP=4.40227;AC=1;AF=0.00543478;AN=184;AO=19;CIGAR=1X;DP=2243;DPB=2243;DPRA=0.871348;EPP=3.12459;EPPR=3.44108;GTI=1;LEN=1;MEANALT=1;MQM=22.1053;MQMR=25.1071;NS=92;NUMALT=1;ODDS=4.16269;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=670;QR=81423;RO=2223;RPP=44.2683;RPPR=4830.19;RUN=1;SAF=10;SAP=3.12459;SAR=9;SRF=1122;SRP=3.44108;SRR=1101;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:24:24:872:0:0:0,-7.22472,-10 0/0:57.5548:10:10:363:0:0:0,-3.0103,-10 0/0:84.6473:19:19:719:0:0:0,-5.71957,-10 0/0:69.596:14:14:520:0:0:0,-4.21442,-10 0/0:69.596:14:14:514:0:0:0,-4.21442,-10 0/0:51.5342:8:8:259:0:0:0,-2.40824,-10 0/0:99:48:48:1766:0:0:0,-10,-10 0/0:99:36:36:1292:0:0:0,-10,-10 0/0:62.1194:21:20:707:1:16:0,-3.39941,-10 0/0:42.5033:5:5:179:0:0:0,-1.50515,-10 0/0:54.5445:9:9:339:0:0:0,-2.70927,-10 0/0:66.5857:13:13:479:0:0:0,-3.91339,-10 0/0:99:31:31:1160:0:0:0,-9.33193,-10 0/0:99:55:55:2066:0:0:0,-10,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:99:35:35:1324:0:0:0,-10,-10 0/0:99:41:41:1444:0:0:0,-10,-10 0/0:66.5857:13:13:490:0:0:0,-3.91339,-10 0/0:99:30:30:1077:0:0:0,-9.0309,-10 0/0:99:43:43:1583:0:0:0,-10,-10 0/0:99:27:27:1011:0:0:0,-8.12781,-10 0/0:99:42:42:1563:0:0:0,-10,-10 0/0:0.0670728:4:3:114:1:16:-0.99794,0,-10 0/0:93.6769:22:22:819:0:0:0,-6.62266,-10 0/0:96.6857:23:23:832:0:0:0,-6.92369,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:93.6769:22:22:812:0:0:0,-6.62266,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:99:25:25:915:0:0:0,-7.52575,-10 0/0:99:44:44:1640:0:0:0,-10,-10 0/0:63.5754:12:12:451:0:0:0,-3.61236,-10 0/0:48.5239:7:7:264:0:0:0,-2.10721,-10 0/0:66.5857:13:13:465:0:0:0,-3.91339,-10 0/0:69.596:14:14:518:0:0:0,-4.21442,-10 0/0:99:35:35:1300:0:0:0,-10,-10 0/0:48.5239:7:7:266:0:0:0,-2.10721,-10 0/0:75.6166:16:16:575:0:0:0,-4.81648,-10 0/0:99:38:38:1407:0:0:0,-10,-10 0/0:93.6769:22:22:760:0:0:0,-6.62266,-10 0/0:81.6371:18:18:658:0:0:0,-5.41854,-10 0/1:99:39:22:786:17:638:-10,0,-10 0/0:78.6269:17:17:604:0:0:0,-5.11751,-10 0/0:81.6371:18:18:646:0:0:0,-5.41854,-10 0/0:99:25:25:904:0:0:0,-7.52575,-10 0/0:72.6063:15:15:539:0:0:0,-4.51545,-10 0/0:72.6063:15:15:550:0:0:0,-4.51545,-10 0/0:99:50:50:1844:0:0:0,-10,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:72.6063:15:15:554:0:0:0,-4.51545,-10 0/0:99:40:40:1465:0:0:0,-10,-10 0/0:63.5754:12:12:445:0:0:0,-3.61236,-10 0/0:99:53:53:1938:0:0:0,-10,-10 0/0:78.6269:17:17:637:0:0:0,-5.11751,-10 0/0:63.5754:12:12:428:0:0:0,-3.61236,-10 0/0:99:65:65:2300:0:0:0,-10,-10 0/0:84.6473:19:19:686:0:0:0,-5.71957,-10 0/0:84.6473:19:19:703:0:0:0,-5.71957,-10 0/0:66.5857:13:13:481:0:0:0,-3.91339,-10 0/0:84.6473:19:19:665:0:0:0,-5.71957,-10 0/0:84.6473:19:19:685:0:0:0,-5.71957,-10 0/0:99:34:34:1281:0:0:0,-10,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:99:54:54:1969:0:0:0,-10,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:90.6685:21:21:793:0:0:0,-6.32163,-10 0/0:99:46:46:1649:0:0:0,-10,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:75.6166:16:16:566:0:0:0,-4.81648,-10 0/0:99:40:40:1456:0:0:0,-10,-10 0/0:69.596:14:14:531:0:0:0,-4.21442,-10 0/0:99:30:30:1087:0:0:0,-9.0309,-10 0/0:99:31:31:1151:0:0:0,-9.33193,-10 0/0:93.6769:23:22:806:0:0:0,-6.62266,-10 0/0:99:30:30:1137:0:0:0,-9.0309,-10 0/0:99:27:27:979:0:0:0,-8.12781,-10 0/0:78.6269:17:17:632:0:0:0,-5.11751,-10 0/0:72.6063:15:15:544:0:0:0,-4.51545,-10 0/0:66.5857:13:13:483:0:0:0,-3.91339,-10 0/0:60.5651:11:11:392:0:0:0,-3.31133,-10 0/0:60.5651:11:11:408:0:0:0,-3.31133,-10 0/0:99:44:44:1658:0:0:0,-10,-10 0/0:99:24:24:842:0:0:0,-7.22472,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:99:31:31:1103:0:0:0,-9.33193,-10 0/0:99:25:25:935:0:0:0,-7.52575,-10 0/0:51.5342:8:8:302:0:0:0,-2.40824,-10 0/0:90.6685:21:21:762:0:0:0,-6.32163,-10 0/0:72.6063:15:15:555:0:0:0,-4.51545,-10 0/0:60.5651:11:11:363:0:0:0,-3.31133,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:75.6166:16:16:588:0:0:0,-4.81648,-10 0/0:72.6063:15:15:569:0:0:0,-4.51545,-10 scaffold_278 262346 . A G 436.528 . AB=0.5625;ABP=4.09604;AC=1;AF=0.00543478;AN=184;AO=19;CIGAR=1X;DP=1682;DPB=1682;DPRA=2.21772;EPP=4.03889;EPPR=4.4357;GTI=0;LEN=1;MEANALT=1.5;MQM=24.8947;MQMR=34.5365;NS=92;NUMALT=1;ODDS=3.90819;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=658;QR=59637;RO=1659;RPP=44.2683;RPPR=3605.48;RUN=1;SAF=11;SAP=4.03889;SAR=8;SRF=813;SRP=4.4357;SRR=846;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.3571:12:12:432:0:0:0,-3.61236,-10 0/0:32.3056:7:7:244:0:0:0,-2.10721,-10 0/0:83.4806:24:24:866:0:0:0,-7.22472,-10 0/0:38.3262:9:9:325:0:0:0,-2.70927,-10 0/0:47.3571:12:12:439:0:0:0,-3.61236,-10 0/0:38.3262:9:9:331:0:0:0,-2.70927,-10 0/0:86.4908:25:25:879:0:0:0,-7.52575,-10 0/0:71.4395:20:20:725:0:0:0,-6.0206,-10 0/0:26.285:5:5:189:0:0:0,-1.50515,-10 0/0:20.2644:3:3:114:0:0:0,-0.90309,-10 0/0:29.2953:6:6:215:0:0:0,-1.80618,-10 0/0:23.2747:4:4:115:0:0:0,-1.20412,-10 0/0:86.4908:25:25:922:0:0:0,-7.52575,-10 0/0:99:42:42:1468:0:0:0,-10,-10 0/0:77.4601:22:22:811:0:0:0,-6.62266,-10 0/0:86.4908:25:25:925:0:0:0,-7.52575,-10 0/0:83.4806:24:24:889:0:0:0,-7.22472,-10 0/0:41.3365:10:10:357:0:0:0,-3.0103,-10 0/0:77.4601:22:22:818:0:0:0,-6.62266,-10 0/0:99:31:31:1078:0:0:0,-9.33193,-10 0/0:65.4189:18:18:642:0:0:0,-5.41854,-10 0/0:83.4806:24:24:881:0:0:0,-7.22472,-10 0/0:41.3365:10:10:365:0:0:0,-3.0103,-10 0/0:68.4292:19:19:653:0:0:0,-5.71957,-10 0/0:65.4189:18:18:667:0:0:0,-5.41854,-10 0/0:83.4806:24:24:886:0:0:0,-7.22472,-10 0/0:53.3777:14:14:507:0:0:0,-4.21442,-10 0/0:53.3777:14:14:525:0:0:0,-4.21442,-10 0/0:62.4086:17:17:625:0:0:0,-5.11751,-10 0/0:80.4704:23:23:755:0:0:0,-6.92369,-10 0/0:20.2644:3:3:113:0:0:0,-0.90309,-10 0/0:53.3777:14:14:488:0:0:0,-4.21442,-10 0/0:65.4189:18:18:645:0:0:0,-5.41854,-10 0/0:44.3468:11:11:403:0:0:0,-3.31133,-10 0/0:59.3983:16:16:568:0:0:0,-4.81648,-10 0/0:38.3262:9:9:333:0:0:0,-2.70927,-10 0/0:47.3571:12:12:431:0:0:0,-3.61236,-10 0/0:99:33:33:1182:0:0:0,-9.93399,-10 0/0:68.4292:19:19:689:0:0:0,-5.71957,-10 0/0:47.3571:12:12:455:0:0:0,-3.61236,-10 0/0:99:32:32:1167:0:0:0,-9.63296,-10 0/0:65.4189:18:18:670:0:0:0,-5.41854,-10 0/0:56.388:15:15:543:0:0:0,-4.51545,-10 0/1:99:32:14:468:18:644:-10,0,-10 0/0:80.4704:24:23:845:0:0:0,-6.92369,-10 0/0:50.3674:13:13:481:0:0:0,-3.91339,-10 0/0:99:48:48:1747:0:0:0,-10,-10 0/0:77.4601:22:22:800:0:0:0,-6.62266,-10 0/0:41.3365:10:10:356:0:0:0,-3.0103,-10 0/0:86.4908:26:25:873:0:0:0,-7.52575,-10 0/0:35.3159:8:8:296:0:0:0,-2.40824,-10 0/0:99:41:41:1466:0:0:0,-10,-10 0/0:56.388:15:15:548:0:0:0,-4.51545,-10 0/0:29.2953:6:6:225:0:0:0,-1.80618,-10 0/0:99:47:45:1667:1:14:0,-10,-10 0/0:41.3365:10:10:349:0:0:0,-3.0103,-10 0/0:80.4704:23:23:819:0:0:0,-6.92369,-10 0/0:20.2644:3:3:110:0:0:0,-0.90309,-10 0/0:56.388:15:15:553:0:0:0,-4.51545,-10 0/0:53.3777:14:14:509:0:0:0,-4.21442,-10 0/0:98.5282:29:29:1067:0:0:0,-8.72987,-10 0/0:68.4292:19:19:688:0:0:0,-5.71957,-10 0/0:99:36:36:1273:0:0:0,-10,-10 0/0:86.4908:25:25:921:0:0:0,-7.52575,-10 0/0:65.4189:18:18:651:0:0:0,-5.41854,-10 0/0:95.5199:28:28:1020:0:0:0,-8.42884,-10 0/0:38.3262:9:9:315:0:0:0,-2.70927,-10 0/0:41.3365:10:10:370:0:0:0,-3.0103,-10 0/0:99:41:41:1485:0:0:0,-10,-10 0/0:38.3262:9:9:336:0:0:0,-2.70927,-10 0/0:95.5199:28:28:913:0:0:0,-8.42884,-10 0/0:89.5008:27:26:902:0:0:0,-7.82678,-10 0/0:65.4189:18:18:614:0:0:0,-5.41854,-10 0/0:50.3674:13:13:492:0:0:0,-3.91339,-10 0/0:80.4704:23:23:810:0:0:0,-6.92369,-10 0/0:71.4395:20:20:701:0:0:0,-6.0206,-10 0/0:50.3674:13:13:474:0:0:0,-3.91339,-10 0/0:38.3262:9:9:315:0:0:0,-2.70927,-10 0/0:38.3262:9:9:310:0:0:0,-2.70927,-10 0/0:41.3365:10:10:351:0:0:0,-3.0103,-10 0/0:99:34:34:1279:0:0:0,-10,-10 0/0:99:32:32:1132:0:0:0,-9.63296,-10 0/0:68.4292:19:19:691:0:0:0,-5.71957,-10 0/0:65.4189:18:18:585:0:0:0,-5.41854,-10 0/0:99:30:30:1063:0:0:0,-9.0309,-10 0/0:26.285:5:5:166:0:0:0,-1.50515,-10 0/0:68.4292:19:19:692:0:0:0,-5.71957,-10 0/0:53.3777:14:14:516:0:0:0,-4.21442,-10 0/0:17.2541:2:2:76:0:0:0,-0.60206,-7.22 0/0:50.3674:13:13:429:0:0:0,-3.91339,-10 0/0:38.3262:9:9:337:0:0:0,-2.70927,-10 0/0:29.2953:6:6:216:0:0:0,-1.80618,-10 scaffold_278 494832 . GA G 144.539 . AB=0.333333;ABP=8.07707;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1M1D1M;DP=1820;DPB=1819;DPRA=1.06226;EPP=3.32051;EPPR=3.08751;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9744;NS=92;NUMALT=1;ODDS=11.6123;PAIRED=0;PAIREDR=0;PAO=1.5;PQA=55;PQR=55;PRO=1.5;QA=265;QR=65689;RO=1800;RPP=18.2106;RPPR=3911.66;RUN=1;SAF=3;SAP=3.32051;SAR=4;SRF=904;SRP=3.08751;SRR=896;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:99:19:19:690:0:0:0,-5.71957,-10 0|0:65.4831:6:6:201:0:0:0,-1.80618,-10 0|1:99:21:14:520:7:265:-10,0,-10 0|0:89.5652:14:14:527:0:0:0,-4.21442,-10 0|0:86.555:13:13:457:0:0:0,-3.91339,-10 0|0:50.4316:1:1:30:0:0:0,-0.30103,-3 0|0:99:42:42:1522:0:0:0,-10,-10 0|0:99:27:27:960:0:0:0,-8.12781,-10 0|0:80.5345:11:11:412:0:0:0,-3.31133,-10 0|0:50.4316:1:1:38:0:0:0,-0.30103,-3.8 0|0:68.4934:7:7:261:0:0:0,-2.10721,-10 0|0:74.5139:9:9:330:0:0:0,-2.70927,-10 0|0:99:38:38:1358:0:0:0,-10,-10 0|0:99:38:38:1423:0:0:0,-10,-10 0|0:98.594:17:17:631:0:0:0,-5.11751,-10 0|0:99:32:32:1166:0:0:0,-9.63296,-10 0|0:99:25:25:931:0:0:0,-7.52575,-10 0|0:77.5242:10:10:378:0:0:0,-3.0103,-10 0|0:99:27:27:959:0:0:0,-8.12781,-10 0|0:99:35:35:1258:0:0:0,-10,-10 0|0:99:25:25:929:0:0:0,-7.52575,-10 0|0:99:26:25:928:0:0:0,-7.52575,-10 0|0:89.5652:14:14:517:0:0:0,-4.21442,-10 0|0:99:23:23:829:0:0:0,-6.92369,-10 0|0:99:24:23:839:0:0:0,-6.92369,-10 0|0:99:26:26:957:0:0:0,-7.82678,-10 0|0:98.594:17:17:595:0:0:0,-5.11751,-10 0|0:86.555:13:13:493:0:0:0,-3.91339,-10 0|0:95.5849:16:16:601:0:0:0,-4.81648,-10 0|0:99:41:41:1492:0:0:0,-10,-10 0|0:71.5037:8:8:301:0:0:0,-2.40824,-10 0|0:92.5752:16:15:550:0:0:0,-4.51545,-10 0|0:99:19:19:653:0:0:0,-5.71957,-10 0|0:68.4934:7:7:226:0:0:0,-2.10721,-10 0|0:99:18:18:660:0:0:0,-5.41854,-10 0|0:53.4419:2:2:69:0:0:0,-0.60206,-6.555 0|0:99:18:18:598:0:0:0,-5.41854,-10 0|0:99:27:25:915:0:0:0,-7.52575,-10 0|0:99:19:18:665:0:0:0,-5.41854,-10 0|0:86.555:13:13:483:0:0:0,-3.91339,-10 0|0:99:20:20:753:0:0:0,-6.0206,-10 0|0:99:22:21:778:0:0:0,-6.32163,-10 0|0:98.594:17:17:640:0:0:0,-5.11751,-10 0|0:99:25:25:886:0:0:0,-7.52575,-10 0|0:99:28:28:1027:0:0:0,-8.42884,-10 0|0:99:18:18:670:0:0:0,-5.41854,-10 0|0:99:41:40:1425:0:0:0,-10,-10 0|0:99:27:27:990:0:0:0,-8.12781,-10 0|0:95.5849:16:16:588:0:0:0,-4.81648,-10 0|0:99:44:43:1599:0:0:0,-10,-10 0|0:77.5242:10:10:377:0:0:0,-3.0103,-10 0|0:99:37:37:1343:0:0:0,-10,-10 0|0:86.555:13:13:488:0:0:0,-3.91339,-10 0|0:62.4728:5:5:177:0:0:0,-1.50515,-10 0|0:99:41:41:1505:0:0:0,-10,-10 0|0:99:20:20:736:0:0:0,-6.0206,-10 0|0:99:24:24:875:0:0:0,-7.22472,-10 0|0:71.5037:8:8:286:0:0:0,-2.40824,-10 0|0:99:20:20:747:0:0:0,-6.0206,-10 0|0:86.555:13:13:470:0:0:0,-3.91339,-10 0|0:99:27:27:993:0:0:0,-8.12781,-10 0|0:99:19:19:699:0:0:0,-5.71957,-10 0|0:99:40:39:1430:0:0:0,-10,-10 0|0:95.5849:16:16:585:0:0:0,-4.81648,-10 0|0:92.5752:15:15:556:0:0:0,-4.51545,-10 0|0:99:24:24:898:0:0:0,-7.22472,-10 0|0:89.5652:14:14:519:0:0:0,-4.21442,-10 0|0:83.5448:12:12:451:0:0:0,-3.61236,-10 0|0:99:39:38:1405:0:0:0,-10,-10 0|0:77.5242:10:10:365:0:0:0,-3.0103,-10 0|0:99:21:21:786:0:0:0,-6.32163,-10 0|0:99:34:34:1230:0:0:0,-10,-10 0|0:99:26:25:915:0:0:0,-7.52575,-10 0|0:95.5849:16:16:580:0:0:0,-4.81648,-10 0|0:99:30:30:1086:0:0:0,-9.0309,-10 0|0:71.5037:8:8:291:0:0:0,-2.40824,-10 0|0:99:18:18:643:0:0:0,-5.41854,-10 0|0:92.5752:15:15:527:0:0:0,-4.51545,-10 0|0:56.4522:3:3:109:0:0:0,-0.90309,-10 0|0:83.5448:12:12:436:0:0:0,-3.61236,-10 0|0:99:35:35:1280:0:0:0,-10,-10 0|0:99:28:28:1003:0:0:0,-8.42884,-10 0|0:99:28:28:1044:0:0:0,-8.42884,-10 0|0:99:21:21:749:0:0:0,-6.32163,-10 0|0:92.5752:15:15:549:0:0:0,-4.51545,-10 0|0:65.4831:6:6:223:0:0:0,-1.80618,-10 0|0:99:19:19:695:0:0:0,-5.71957,-10 0|0:80.5345:11:11:365:0:0:0,-3.31133,-10 0|0:68.4934:7:7:263:0:0:0,-2.10721,-10 0|0:86.555:13:13:475:0:0:0,-3.91339,-10 0|0:83.5448:13:12:429:0:0:0,-3.61236,-10 0|0:80.5345:11:11:398:0:0:0,-3.31133,-10 scaffold_278 596147 . T C 12349.1 . AB=0.514768;ABP=3.90821;AC=33;AF=0.179348;AN=184;AO=442;CIGAR=1X;DP=2276;DPB=2276;DPRA=1.30483;EPP=3.02995;EPPR=3.05302;GTI=0;LEN=1;MEANALT=1.03704;MQM=59.7534;MQMR=59.9027;NS=92;NUMALT=1;ODDS=3.05824;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=16114;QR=66972;RO=1830;RPP=962.801;RPPR=3959.45;RUN=1;SAF=222;SAP=3.02995;SAR=220;SRF=910;SRP=3.12896;SRR=920;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:15.2712:20:19:697:1:34:0,-1.31957,-10 0/0:23.0074:8:8:287:0:0:0,-2.40824,-10 0/0:95.2543:32:32:1211:0:0:0,-9.63296,-10 0/0:35.0486:12:12:446:0:0:0,-3.61236,-10 0/0:44.0795:15:15:526:0:0:0,-4.51545,-10 0/0:38.0589:13:13:483:0:0:0,-3.91339,-10 0/0:99:45:45:1697:0:0:0,-10,-10 0/0:99:36:36:1343:0:0:0,-10,-10 0/0:44.0795:15:15:556:0:0:0,-4.51545,-10 0/0:35.0486:12:12:437:0:0:0,-3.61236,-10 0/0:38.0589:14:13:465:0:0:0,-3.91339,-10 0/0:26.0177:9:9:341:0:0:0,-2.70927,-10 0/0:99:46:46:1611:0:0:0,-10,-10 0/0:98.2643:33:33:1231:0:0:0,-9.93399,-10 0/0:99:39:39:1390:0:0:0,-10,-10 0/0:98.2643:33:33:1183:0:0:0,-9.93399,-10 0/0:98.2643:33:33:1134:0:0:0,-9.93399,-10 0/0:13.9765:5:5:181:0:0:0,-1.50515,-10 0/0:83.2134:28:28:1024:0:0:0,-8.42884,-10 0/1:99:62:33:1228:29:1039:-10,0,-10 0/1:99:26:15:536:11:399:-10,0,-10 0/1:99:41:17:590:24:860:-10,0,-10 1/1:23.649:14:0:0:14:522:-10,-4.21442,0 0/1:99:25:14:525:11:405:-10,0,-10 0/0:53.1104:18:18:657:0:0:0,-5.41854,-10 0/1:99:41:21:774:20:735:-10,0,-10 0/0:68.1619:23:23:843:0:0:0,-6.92369,-10 0/0:50.1001:17:17:637:0:0:0,-5.11751,-10 0/0:45.5115:32:31:1114:1:38:0,-4.32781,-10 0/0:99:36:36:1338:0:0:0,-10,-10 0/0:16.9868:6:6:219:0:0:0,-1.80618,-10 0/0:23.0074:8:8:299:0:0:0,-2.40824,-10 1/1:62.7829:27:0:0:27:981:-10,-8.12781,0 1/1:20.6387:13:0:0:13:468:-10,-3.91339,0 0/0:86.2237:29:29:1091:0:0:0,-8.72987,-10 0/0:26.0177:9:9:307:0:0:0,-2.70927,-10 1/1:29.6696:16:0:0:16:587:-10,-4.81648,0 0/0:67.3535:32:31:1141:1:16:0,-6.52781,-10 0/0:68.1619:23:23:834:0:0:0,-6.92369,-10 0/1:99:15:8:283:7:241:-10,0,-10 0/1:99:40:21:797:19:719:-10,0,-10 0/0:74.1825:25:25:934:0:0:0,-7.52575,-10 0/0:56.1207:19:19:656:0:0:0,-5.71957,-10 0/1:99:40:12:424:28:1024:-10,0,-10 0/1:99:32:17:615:15:548:-10,0,-10 0/1:99:15:9:328:6:203:-10,0,-10 0/1:99:54:21:775:33:1228:-10,0,-10 1/1:77.8343:32:0:0:32:1174:-10,-9.63296,0 1/1:50.7417:23:0:0:23:846:-10,-6.92369,0 0/0:99:39:39:1455:0:0:0,-10,-10 0/0:44.0795:15:15:514:0:0:0,-4.51545,-10 0/1:99:44:21:784:23:836:-10,0,-10 0/0:59.131:20:20:747:0:0:0,-6.0206,-10 0/0:29.028:10:10:369:0:0:0,-3.0103,-10 0/1:99:39:20:723:18:653:-10,0,-10 1/1:41.7108:20:0:0:20:721:-10,-6.0206,0 1/1:26.6593:15:0:0:15:559:-10,-4.51545,0 0/0:41.0692:14:14:525:0:0:0,-4.21442,-10 0/0:74.1825:25:25:913:0:0:0,-7.52575,-10 0/0:32.0383:11:11:394:0:0:0,-3.31133,-10 0/0:99:40:40:1451:0:0:0,-10,-10 0/0:83.2134:28:28:1032:0:0:0,-8.42884,-10 0/0:99:48:47:1767:1:24:0,-10,-10 0/0:74.1825:25:25:913:0:0:0,-7.52575,-10 0/0:59.131:20:20:716:0:0:0,-6.0206,-10 0/0:99:50:50:1847:0:0:0,-10,-10 0/0:89.2331:30:30:1101:0:0:0,-9.0309,-10 0/0:19.9971:7:7:244:0:0:0,-2.10721,-10 0/0:98.2643:33:33:1224:0:0:0,-9.93399,-10 0/0:29.028:11:10:376:0:0:0,-3.0103,-10 0/0:62.1413:21:21:769:0:0:0,-6.32163,-10 0/0:92.2425:32:31:1139:0:0:0,-9.33193,-10 0/0:68.1619:23:23:848:0:0:0,-6.92369,-10 0/0:59.131:20:20:750:0:0:0,-6.0206,-10 0/0:99:34:34:1225:0:0:0,-10,-10 0/0:80.2031:27:27:962:0:0:0,-8.12781,-10 0/0:53.1104:18:18:642:0:0:0,-5.41854,-10 0/0:59.131:20:20:749:0:0:0,-6.0206,-10 0/0:38.0589:13:13:482:0:0:0,-3.91339,-10 0/0:50.1001:17:17:606:0:0:0,-5.11751,-10 0/0:80.2031:27:27:1007:0:0:0,-8.12781,-10 0/0:77.1928:26:26:975:0:0:0,-7.82678,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:89.2331:30:30:1090:0:0:0,-9.0309,-10 0/0:59.131:20:20:711:0:0:0,-6.0206,-10 0/0:47.0898:16:16:594:0:0:0,-4.81648,-10 1/1:38.7005:19:0:0:19:690:-10,-5.71957,0 1/1:26.6593:15:0:0:15:564:-10,-4.51545,0 0/0:19.9971:7:7:262:0:0:0,-2.10721,-10 0/0:77.1928:26:26:937:0:0:0,-7.82678,-10 0/0:77.1928:26:26:964:0:0:0,-7.82678,-10 0/0:59.131:20:20:744:0:0:0,-6.0206,-10 scaffold_278 598764 . G C 4394.81 . AB=0.610169;ABP=15.4503;AC=16;AF=0.0869565;AN=184;AO=163;CIGAR=1X;DP=1700;DPB=1700;DPRA=0.934496;EPP=4.62225;EPPR=6.54921;GTI=4;LEN=1;MEANALT=1;MQM=59.8221;MQMR=59.8911;NS=92;NUMALT=1;ODDS=0.325075;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5997;QR=55025;RO=1534;RPP=356.96;RPPR=3316.7;RUN=1;SAF=87;SAP=4.62225;SAR=76;SRF=794;SRP=7.13808;SRR=740;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.0246:15:15:512:0:0:0,-4.51545,-10 0/0:40.9937:12:12:441:0:0:0,-3.61236,-10 0/0:56.0452:17:17:635:0:0:0,-5.11751,-10 0/0:25.9422:7:7:261:0:0:0,-2.10721,-10 0/1:1.21036:9:0:0:9:320:-10,-2.70927,0 0/1:1.21036:9:0:0:9:331:-10,-2.70927,0 1/1:67.5362:30:0:0:30:1115:-10,-9.0309,0 0/0:99:34:34:1189:0:0:0,-10,-10 0/0:34.9731:10:10:356:0:0:0,-3.0103,-10 0/1:0.0331366:4:0:0:4:112:-10,-1.20412,0 1/1:10.3405:11:0:0:11:407:-10,-3.31133,0 0/0:34.9731:10:10:336:0:0:0,-3.0103,-10 1/1:61.5156:28:0:0:28:1024:-10,-8.42884,0 0/1:99:29:15:544:14:525:-10,0,-10 0/0:89.1578:29:28:1038:0:0:0,-8.42884,-10 0/0:80.1275:25:25:912:0:0:0,-7.52575,-10 1/1:43.4538:22:0:0:22:807:-10,-6.62266,0 0/0:50.0246:15:15:526:0:0:0,-4.51545,-10 0/1:99:25:16:578:9:342:-10,0,-10 0/0:99:35:35:1250:0:0:0,-10,-10 0/0:44.004:13:13:454:0:0:0,-3.91339,-10 0/0:98.1836:31:31:1123:0:0:0,-9.33193,-10 0/0:37.9834:11:11:416:0:0:0,-3.31133,-10 0/1:99:17:8:301:9:337:-10,0,-10 0/0:62.0658:19:19:661:0:0:0,-5.71957,-10 0/0:68.0864:21:21:752:0:0:0,-6.32163,-10 0/0:77.1173:25:24:835:0:0:0,-7.22472,-10 0/0:47.0143:14:14:478:0:0:0,-4.21442,-10 0/0:62.0658:19:19:692:0:0:0,-5.71957,-10 0/0:80.1275:25:25:849:0:0:0,-7.52575,-10 0/0:40.9937:12:12:417:0:0:0,-3.61236,-10 0/0:22.9319:6:6:193:0:0:0,-1.80618,-10 0/0:50.0246:15:15:537:0:0:0,-4.51545,-10 0/0:37.9834:11:11:394:0:0:0,-3.31133,-10 0/0:34.9731:10:10:357:0:0:0,-3.0103,-10 0/0:31.9628:9:9:333:0:0:0,-2.70927,-10 0/0:34.9731:10:10:363:0:0:0,-3.0103,-10 0/0:80.1275:25:25:920:0:0:0,-7.52575,-10 0/0:77.1173:24:24:856:0:0:0,-7.22472,-10 0/0:47.0143:14:14:514:0:0:0,-4.21442,-10 0/0:99:37:37:1310:0:0:0,-10,-10 0/0:53.0349:16:16:598:0:0:0,-4.81648,-10 0/0:53.0349:16:16:572:0:0:0,-4.81648,-10 0/0:95.1762:30:30:1063:0:0:0,-9.0309,-10 0/0:62.0658:19:19:694:0:0:0,-5.71957,-10 0/0:68.0864:21:21:730:0:0:0,-6.32163,-10 0/0:99:41:40:1425:0:0:0,-10,-10 0/0:83.1377:26:26:949:0:0:0,-7.82678,-10 0/0:37.9834:11:11:396:0:0:0,-3.31133,-10 0/0:77.1173:24:24:854:0:0:0,-7.22472,-10 0/0:50.0246:15:15:563:0:0:0,-4.51545,-10 0/0:99:41:41:1481:0:0:0,-10,-10 0/0:37.9834:11:11:378:0:0:0,-3.31133,-10 0/0:16.9113:4:4:150:0:0:0,-1.20412,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:37.9834:11:11:400:0:0:0,-3.31133,-10 0/0:56.0452:17:17:598:0:0:0,-5.11751,-10 0/0:40.9937:12:12:442:0:0:0,-3.61236,-10 0/0:62.0658:19:19:647:0:0:0,-5.71957,-10 0/0:50.0246:15:15:536:0:0:0,-4.51545,-10 0/0:99:32:32:1186:0:0:0,-9.63296,-10 0/0:44.004:13:13:490:0:0:0,-3.91339,-10 0/0:99:34:34:1188:0:0:0,-10,-10 0/1:99:19:7:238:12:453:-10,0,-10 0/0:28.9525:8:8:290:0:0:0,-2.40824,-10 0/0:95.1762:30:30:1075:0:0:0,-9.0309,-10 0/0:44.004:13:13:494:0:0:0,-3.91339,-10 0/0:40.9937:12:12:444:0:0:0,-3.61236,-10 0/0:99:42:42:1541:0:0:0,-10,-10 0/0:59.0555:18:18:588:0:0:0,-5.41854,-10 0/0:59.0555:18:18:633:0:0:0,-5.41854,-10 0/0:77.1173:24:24:889:0:0:0,-7.22472,-10 0/0:56.0452:17:17:601:0:0:0,-5.11751,-10 0/0:31.9628:9:9:326:0:0:0,-2.70927,-10 0/0:95.1762:30:30:1125:0:0:0,-9.0309,-10 0/0:31.9628:9:9:311:0:0:0,-2.70927,-10 0/0:40.9937:12:12:433:0:0:0,-3.61236,-10 0/0:31.9628:9:9:340:0:0:0,-2.70927,-10 0/0:34.9731:10:10:378:0:0:0,-3.0103,-10 0/0:28.9525:8:8:285:0:0:0,-2.40824,-10 0/0:99:34:34:1211:0:0:0,-10,-10 0/0:86.1482:27:27:982:0:0:0,-8.12781,-10 0/0:71.0967:22:22:772:0:0:0,-6.62266,-10 0/0:50.0246:15:15:546:0:0:0,-4.51545,-10 0/0:68.0864:21:21:702:0:0:0,-6.32163,-10 0/1:0.134091:6:0:0:6:224:-10,-1.80618,0 0/0:44.004:13:13:487:0:0:0,-3.91339,-10 0/0:59.0555:18:18:649:0:0:0,-5.41854,-10 0/0:19.9216:5:5:167:0:0:0,-1.50515,-10 0/0:50.0246:15:15:521:0:0:0,-4.51545,-10 0/0:53.0349:16:16:568:0:0:0,-4.81648,-10 0/0:50.0246:15:15:552:0:0:0,-4.51545,-10 scaffold_278 780229 . A C 239.596 . AB=0.555556;ABP=3.49285;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=2569;DPB=2569;DPRA=1.29678;EPP=3.17734;EPPR=4.05223;GTI=0;LEN=1;MEANALT=1;MQM=59.0769;MQMR=58.8833;NS=92;NUMALT=1;ODDS=16.4315;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=426;QR=92759;RO=2553;RPP=31.2394;RPPR=4537.74;RUN=1;SAF=6;SAP=3.17734;SAR=7;SRF=1263;SRP=3.63036;SRR=1290;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:21:21:749:0:0:0,-6.32163,-10 0/0:86.412:10:10:343:0:0:0,-3.0103,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:99:16:16:597:0:0:0,-4.81648,-10 0/0:99:18:18:667:0:0:0,-5.41854,-10 0/0:99:15:15:546:0:0:0,-4.51545,-10 0/0:99:65:65:2280:0:0:0,-10,-10 0/0:99:36:36:1315:0:0:0,-10,-10 0/0:99:26:26:947:0:0:0,-7.82678,-10 0/0:80.3917:8:8:298:0:0:0,-2.40824,-10 0/0:83.4019:9:9:308:0:0:0,-2.70927,-10 0/0:77.3814:7:7:266:0:0:0,-2.10721,-10 0/0:99:46:46:1587:0:0:0,-10,-10 0/0:99:39:39:1391:0:0:0,-10,-10 0/0:99:45:45:1636:0:0:0,-10,-10 0/0:99:35:35:1247:0:0:0,-10,-10 0/0:99:49:49:1810:0:0:0,-10,-10 0/0:99:21:21:777:0:0:0,-6.32163,-10 0/0:99:26:26:964:0:0:0,-7.82678,-10 0/0:99:53:53:1879:0:0:0,-10,-10 0/0:99:25:25:871:0:0:0,-7.52575,-10 0/0:99:30:30:1131:0:0:0,-9.0309,-10 0/0:99:15:15:566:0:0:0,-4.51545,-10 0/0:99:28:27:992:1:16:0,-5.38168,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:99:40:40:1455:0:0:0,-10,-10 0/0:99:23:23:845:0:0:0,-6.92369,-10 0/0:99:15:15:569:0:0:0,-4.51545,-10 0/0:99:26:26:955:0:0:0,-7.82678,-10 0/0:99:35:35:1228:0:0:0,-10,-10 0/0:89.422:11:11:362:0:0:0,-3.31133,-10 0/0:74.3712:6:6:173:0:0:0,-1.80618,-10 0/0:99:32:31:1130:0:0:0,-9.33193,-10 0/0:99:18:18:675:0:0:0,-5.41854,-10 0/0:99:38:38:1373:0:0:0,-10,-10 0/0:71.3609:5:5:189:0:0:0,-1.50515,-10 0/0:83.4019:9:9:314:0:0:0,-2.70927,-10 0/0:99:37:37:1341:0:0:0,-10,-10 0/0:99:23:23:840:0:0:0,-6.92369,-10 0/0:99:18:18:672:0:0:0,-5.41854,-10 0/0:99:49:49:1794:0:0:0,-10,-10 0/0:99:33:33:1141:0:0:0,-9.93399,-10 0/0:99:25:25:890:0:0:0,-7.52575,-10 0/0:99:50:50:1834:0:0:0,-10,-10 0/0:99:26:26:980:0:0:0,-7.82678,-10 0/0:99:15:15:570:0:0:0,-4.51545,-10 0/0:99:70:70:2513:0:0:0,-10,-10 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:99:21:21:777:0:0:0,-6.32163,-10 0/0:99:52:51:1831:0:0:0,-10,-10 0/0:98.4546:14:14:490:0:0:0,-4.21442,-10 0/0:99:44:44:1647:0:0:0,-10,-10 0/0:99:24:24:873:0:0:0,-7.22472,-10 0/0:95.4438:13:13:463:0:0:0,-3.91339,-10 0/0:99:44:44:1605:0:0:0,-10,-10 0/0:99:22:22:753:0:0:0,-6.62266,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/0:98.4546:14:14:515:0:0:0,-4.21442,-10 0/0:99:27:27:944:0:0:0,-8.12781,-10 0/0:95.4438:13:13:486:0:0:0,-3.91339,-10 0/0:99:57:57:2036:0:0:0,-10,-10 0/0:99:32:32:1176:0:0:0,-9.63296,-10 0/0:99:55:55:2060:0:0:0,-10,-10 0/1:99:18:8:301:10:378:-10,0,-10 0/0:92.4333:12:12:432:0:0:0,-3.61236,-10 0/0:99:56:55:1993:1:16:0,-10,-10 0/0:99:25:25:916:0:0:0,-7.52575,-10 0/0:89.422:11:11:400:0:0:0,-3.31133,-10 0/0:99:53:52:1939:0:0:0,-10,-10 0/0:99:20:20:694:0:0:0,-6.0206,-10 0/0:99:23:23:837:0:0:0,-6.92369,-10 0/0:99:37:37:1343:0:0:0,-10,-10 0/0:99:30:30:1119:0:0:0,-9.0309,-10 0/0:99:20:20:737:0:0:0,-6.0206,-10 0/0:99:26:26:956:0:0:0,-7.82678,-10 0/0:99:21:21:717:0:0:0,-6.32163,-10 0/0:99:17:17:628:0:0:0,-5.11751,-10 0/0:99:21:21:794:0:0:0,-6.32163,-10 0/0:92.4333:12:12:455:0:0:0,-3.61236,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:99:47:47:1748:0:0:0,-10,-10 0/0:99:41:40:1425:1:16:0,-9.12945,-10 0/0:99:37:37:1333:0:0:0,-10,-10 0/0:95.4438:13:13:489:0:0:0,-3.91339,-10 0/0:99:41:41:1506:0:0:0,-10,-10 0/0:99:17:17:607:0:0:0,-5.11751,-10 0/0:99:27:27:978:0:0:0,-8.12781,-10 0/0:99:19:19:711:0:0:0,-5.71957,-10 0/0:95.4438:13:13:492:0:0:0,-3.91339,-10 0/0:99:22:22:819:0:0:0,-6.62266,-10 0/0:99:34:34:1269:0:0:0,-10,-10 0/0:99:21:21:762:0:0:0,-6.32163,-10 scaffold_285 32498 . C T 397.993 . AB=0.615385;ABP=6.01695;AC=1;AF=0.00543478;AN=184;AO=18;CIGAR=1X;DP=2147;DPB=2147;DPRA=1.47971;EPP=10.7311;EPPR=3.0358;GTI=0;LEN=1;MEANALT=1;MQM=59.2778;MQMR=59.8286;NS=92;NUMALT=1;ODDS=9.25613;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=624;QR=77742;RO=2129;RPP=42.0968;RPPR=4626.08;RUN=1;SAF=13;SAP=10.7311;SAR=5;SRF=1067;SRP=3.0358;SRR=1062;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.3134:15:15:561:0:0:0,-4.51545,-10 0/0:73.3134:15:15:550:0:0:0,-4.51545,-10 0/0:99:30:30:1104:0:0:0,-9.0309,-10 0/0:76.3237:16:16:605:0:0:0,-4.81648,-10 0/0:70.3031:14:14:530:0:0:0,-4.21442,-10 0/0:55.2516:9:9:339:0:0:0,-2.70927,-10 0/0:99:34:34:1224:0:0:0,-10,-10 0/0:99:26:26:950:0:0:0,-7.82678,-10 0/0:73.3134:15:15:539:0:0:0,-4.51545,-10 0/0:46.2207:6:6:224:0:0:0,-1.80618,-10 0/0:40.2001:4:4:152:0:0:0,-1.20412,-10 0/0:67.2928:13:13:493:0:0:0,-3.91339,-10 0/0:99:50:50:1852:0:0:0,-10,-10 0/0:99:53:53:1858:0:0:0,-10,-10 0/0:99:38:38:1428:0:0:0,-10,-10 0/0:99:26:26:933:0:0:0,-7.82678,-10 0/0:99:28:28:992:0:0:0,-8.42884,-10 0/0:55.2516:9:9:313:0:0:0,-2.70927,-10 0/0:99:24:24:878:0:0:0,-7.22472,-10 0/0:99:37:37:1397:0:0:0,-10,-10 0/0:97.3886:23:23:808:0:0:0,-6.92369,-10 0/0:99:44:44:1630:0:0:0,-10,-10 0/0:64.2825:12:12:450:0:0:0,-3.61236,-10 0/0:99:33:33:1218:0:0:0,-9.93399,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 0/0:99:35:35:1289:0:0:0,-10,-10 0/0:97.3886:23:23:845:0:0:0,-6.92369,-10 0/0:61.2722:11:11:401:0:0:0,-3.31133,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 0/0:99:27:27:938:0:0:0,-8.12781,-10 0/0:43.2104:5:5:168:0:0:0,-1.50515,-10 0/0:46.2207:6:6:221:0:0:0,-1.80618,-10 0/0:85.3545:19:19:713:0:0:0,-5.71957,-10 0/0:64.2825:12:12:451:0:0:0,-3.61236,-10 0/0:85.3545:19:19:664:0:0:0,-5.71957,-10 0/0:43.2104:5:5:187:0:0:0,-1.50515,-10 0/0:58.2619:10:10:375:0:0:0,-3.0103,-10 0/0:99:27:27:1009:0:0:0,-8.12781,-10 0/0:79.334:17:17:638:0:0:0,-5.11751,-10 0/0:79.334:17:17:591:0:0:0,-5.11751,-10 0/0:99:44:44:1614:0:0:0,-10,-10 0/0:91.3748:21:21:772:0:0:0,-6.32163,-10 0/0:97.3886:23:23:816:0:0:0,-6.92369,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:99:24:24:899:0:0:0,-7.22472,-10 0/0:73.3134:15:15:563:0:0:0,-4.51545,-10 0/0:99:44:44:1631:0:0:0,-10,-10 0/0:99:24:24:880:0:0:0,-7.22472,-10 0/0:97.3886:23:23:837:0:0:0,-6.92369,-10 0/0:99:42:42:1464:0:0:0,-10,-10 0/0:94.3846:22:22:832:0:0:0,-6.62266,-10 0/0:99:39:39:1384:0:0:0,-10,-10 0/0:76.3237:16:16:580:0:0:0,-4.81648,-10 0/0:49.231:7:7:266:0:0:0,-2.10721,-10 0/0:99:51:51:1837:0:0:0,-10,-10 0/0:64.2825:12:12:404:0:0:0,-3.61236,-10 0/0:99:33:33:1240:0:0:0,-9.93399,-10 0/0:73.3134:15:15:557:0:0:0,-4.51545,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:61.2722:11:11:371:0:0:0,-3.31133,-10 0/1:99:26:10:378:16:592:-10,0,-10 0/0:99:33:33:1200:0:0:0,-9.93399,-10 0/0:99:45:45:1651:0:0:0,-10,-10 0/0:83.7547:27:26:978:1:16:0,-5.09645,-10 0/0:64.2825:12:12:456:0:0:0,-3.61236,-10 0/0:99:39:39:1434:0:0:0,-10,-10 0/0:99:24:24:858:0:0:0,-7.22472,-10 0/0:70.3031:14:14:507:0:0:0,-4.21442,-10 0/0:99:37:37:1352:0:0:0,-10,-10 0/0:52.2413:8:8:303:0:0:0,-2.40824,-10 0/0:91.3748:21:21:768:0:0:0,-6.32163,-10 0/0:99:49:48:1763:1:16:0,-10,-10 0/0:99:37:37:1338:0:0:0,-10,-10 0/0:97.3886:23:23:805:0:0:0,-6.92369,-10 0/0:99:32:32:1209:0:0:0,-9.63296,-10 0/0:99:26:26:912:0:0:0,-7.82678,-10 0/0:82.3443:18:18:640:0:0:0,-5.41854,-10 0/0:79.334:17:17:588:0:0:0,-5.11751,-10 0/0:49.231:7:7:264:0:0:0,-2.10721,-10 0/0:76.3237:16:16:601:0:0:0,-4.81648,-10 0/0:99:44:44:1620:0:0:0,-10,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:99:27:27:1011:0:0:0,-8.12781,-10 0/0:99:24:24:896:0:0:0,-7.22472,-10 0/0:91.3748:21:21:771:0:0:0,-6.32163,-10 0/0:52.2413:8:8:301:0:0:0,-2.40824,-10 0/0:85.3545:19:19:711:0:0:0,-5.71957,-10 0/0:55.2516:9:9:340:0:0:0,-2.70927,-10 0/0:55.2516:9:9:340:0:0:0,-2.70927,-10 0/0:94.3846:22:22:781:0:0:0,-6.62266,-10 0/0:99:24:24:854:0:0:0,-7.22472,-10 0/0:61.2722:11:11:362:0:0:0,-3.31133,-10 scaffold_285 37051 . T C 37983.1 . AB=0.574074;ABP=5.5839;AC=3;AF=0.0163043;AN=184;AO=31;CIGAR=1X3M1X;DP=1287;DPB=1289;DPRA=1.29743;EPP=3.08035;EPPR=3.44459;GTI=3;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=92;NUMALT=2;ODDS=4.39367;PAIRED=0;PAIREDR=0;PAO=1;PQA=38;PQR=37.5;PRO=1;QA=1122;QR=726;RO=20;RPP=61.9202;RPPR=38.1882;RUN=1;SAF=16;SAP=3.08035;SAR=15;SRF=10;SRP=3.0103;SRR=10;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:41.2909:9:0:0:9,0:313,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:53.3321:13:0:0:13,0:450,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:68.3836:18:0:0:18,0:678,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:44.3012:10:0:0:10,0:358,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:38.2806:8:0:0:8,0:264,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:50.3218:12:0:0:12,0:451,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:99:34:0:0:34,0:1214,0:-10,-10,0,-10,-10,-10 0|0:71.3939:19:0:0:19,0:712,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:41.2909:9:0:0:9,0:339,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:23.2291:3:0:0:3,0:114,0:-10,-0.90309,0,-10,-0.90309,-10 0|0:23.2291:3:0:0:3,0:114,0:-10,-0.90309,0,-10,-0.90309,-10 0|0:35.2703:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:98.4852:28:0:0:28,0:984,0:-10,-8.42884,0,-10,-8.42884,-10 0|0:89.4555:26:0:0:25,0:918,0:-10,-7.52575,0,-10,-7.52575,-10 0|0:99:16:9:341:7,0:265,0:-10,0,-10,-10,-10,-10 0|0:68.3836:18:0:0:18,0:662,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:56.3424:14:0:0:14,0:531,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:41.2909:10:0:0:9,0:339,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:77.4145:21:0:0:21,0:726,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:74.4042:22:0:0:20,0:728,0:-10,-6.0206,0,-10,-6.0206,-10 0|0:44.3012:10:0:0:10,0:379,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:74.4042:20:0:0:20,0:746,0:-10,-6.0206,0,-10,-6.0206,-10 0|0:44.3012:10:0:0:10,0:375,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:47.3115:11:0:0:11,0:391,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:47.3115:11:0:0:11,0:405,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:68.3836:18:0:0:18,0:665,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:53.3321:13:0:0:13,0:492,0:-10,-3.91339,0,-10,-3.91339,-10 0|0:41.2909:9:0:0:9,0:317,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:50.3218:12:0:0:12,0:456,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:80.4248:22:0:0:22,0:829,0:-10,-6.62266,0,-10,-6.62266,-10 0|0:20.2188:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 0|0:32.26:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 0|0:47.3115:11:0:0:11,0:412,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:44.3012:10:0:0:10,0:375,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:62.363:16:0:0:16,0:577,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:29.2497:5:0:0:5,0:188,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:41.2909:9:0:0:9,0:335,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:62.363:16:0:0:16,0:594,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:50.3218:12:0:0:12,0:429,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:38.2806:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:86.4451:24:0:0:24,0:849,0:-10,-7.22472,0,-10,-7.22472,-10 0|0:38.2806:8:0:0:8,0:303,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:68.3836:18:0:0:18,0:670,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:68.3836:18:0:0:18,0:649,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:56.3424:14:0:0:14,0:510,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:44.3012:10:0:0:10,0:379,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:99:32:0:0:32,0:1207,0:-10,-9.63296,0,-10,-9.63296,-10 0|0:71.3939:20:0:0:19,0:709,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:29.2497:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:99:36:0:0:36,0:1319,0:-10,-10,0,-10,-10,-10 0|0:38.2806:8:0:0:8,0:299,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:99:31:0:0:31,0:1166,0:-10,-9.33193,0,-10,-9.33193,-10 0|0:38.2806:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 0|0:35.2703:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:86.4451:26:0:0:24,0:854,0:-10,-7.22472,0,-10,-7.22472,-10 0|0:0.0515486:11:1:23:10,0:378,0:-10,0,-0.0300627,-10,-3.04036,-10 0|0:62.363:16:0:0:16,0:584,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:29.2497:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:50.3218:12:0:0:12,0:455,0:-10,-3.61236,0,-10,-3.61236,-10 0|0:29.2497:5:0:0:5,0:188,0:-10,-1.50515,0,-10,-1.50515,-10 0|0:71.3939:19:0:0:19,0:720,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:59.3527:16:0:0:15,0:564,0:-10,-4.51545,0,-10,-4.51545,-10 0|0:71.3939:19:0:0:19,0:717,0:-10,-5.71957,0,-10,-5.71957,-10 0|1:99:12:0:0:4,8:149,299:-10,-10,-10,-10,0,-10 0|0:41.2909:9:0:0:9,0:341,0:-10,-2.70927,0,-10,-2.70927,-10 0|1:99:26:0:0:16,8:599,269:-10,-10,-10,-10,0,-10 0|1:0.0036814:16:0:0:0,15:0,554:-10,-10,-10,-4.51545,-4.51545,0 0|0:6.55483e-06:10:10:362:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 0|0:68.3836:18:0:0:18,0:636,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:47.3115:11:0:0:11,0:412,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:56.3424:15:0:0:14,0:487,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:83.4351:23:0:0:23,0:862,0:-10,-6.92369,0,-10,-6.92369,-10 0|0:56.3424:14:0:0:14,0:490,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:56.3424:14:0:0:14,0:532,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:77.4145:21:0:0:21,0:785,0:-10,-6.32163,0,-10,-6.32163,-10 0|0:47.3115:11:0:0:11,0:418,0:-10,-3.31133,0,-10,-3.31133,-10 0|0:56.3424:14:0:0:14,0:531,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:44.3012:10:0:0:10,0:354,0:-10,-3.0103,0,-10,-3.0103,-10 0|0:26.2394:4:0:0:4,0:152,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:35.2703:7:0:0:7,0:263,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:65.3733:17:0:0:17,0:629,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:65.3733:17:0:0:17,0:635,0:-10,-5.11751,0,-10,-5.11751,-10 0|0:68.3836:18:0:0:18,0:651,0:-10,-5.41854,0,-10,-5.41854,-10 0|0:56.3424:15:0:0:14,0:521,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:62.363:16:0:0:16,0:574,0:-10,-4.81648,0,-10,-4.81648,-10 0|0:35.2703:7:0:0:7,0:262,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:56.3424:14:0:0:14,0:520,0:-10,-4.21442,0,-10,-4.21442,-10 0|0:35.2703:7:0:0:7,0:242,0:-10,-2.10721,0,-10,-2.10721,-10 0|0:26.2394:4:0:0:4,0:149,0:-10,-1.20412,0,-10,-1.20412,-10 0|0:41.2909:9:0:0:9,0:342,0:-10,-2.70927,0,-10,-2.70927,-10 0|0:71.3939:19:0:0:19,0:676,0:-10,-5.71957,0,-10,-5.71957,-10 0|0:41.2909:10:0:0:9,0:319,0:-10,-2.70927,0,-10,-2.70927,-10 scaffold_285 37055 . T C 37983.1 . AB=0.574074;ABP=5.5839;AC=182;AF=0.98913;AN=184;AO=31;CIGAR=1X3M1X;DP=1287;DPB=1289;DPRA=1.29743;EPP=3.08035;EPPR=3.44459;GTI=3;LEN=1;MEANALT=2.66667;MQM=60;MQMR=60;NS=92;NUMALT=2;ODDS=4.39367;PAIRED=0;PAIREDR=0;PAO=1;PQA=38;PQR=37.5;PRO=1;QA=1122;QR=726;RO=20;RPP=61.9202;RPPR=38.1882;RUN=1;SAF=16;SAP=3.08035;SAR=15;SRF=10;SRP=3.0103;SRR=10;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1|1:41.2909:9:0:0:9,0:313,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:53.3321:13:0:0:13,0:450,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:68.3836:18:0:0:18,0:678,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:44.3012:10:0:0:10,0:358,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:38.2806:8:0:0:8,0:264,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:50.3218:12:0:0:12,0:451,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:99:34:0:0:34,0:1214,0:-10,-10,0,-10,-10,-10 1|1:71.3939:19:0:0:19,0:712,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:41.2909:9:0:0:9,0:339,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:23.2291:3:0:0:3,0:114,0:-10,-0.90309,0,-10,-0.90309,-10 1|1:23.2291:3:0:0:3,0:114,0:-10,-0.90309,0,-10,-0.90309,-10 1|1:35.2703:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:98.4852:28:0:0:28,0:984,0:-10,-8.42884,0,-10,-8.42884,-10 1|1:89.4555:26:0:0:25,0:918,0:-10,-7.52575,0,-10,-7.52575,-10 0|1:99:16:9:341:7,0:265,0:-10,0,-10,-10,-10,-10 1|1:68.3836:18:0:0:18,0:662,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:56.3424:14:0:0:14,0:531,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:41.2909:10:0:0:9,0:339,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:77.4145:21:0:0:21,0:726,0:-10,-6.32163,0,-10,-6.32163,-10 1|1:74.4042:22:0:0:20,0:728,0:-10,-6.0206,0,-10,-6.0206,-10 1|1:44.3012:10:0:0:10,0:379,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:74.4042:20:0:0:20,0:746,0:-10,-6.0206,0,-10,-6.0206,-10 1|1:44.3012:10:0:0:10,0:375,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:47.3115:11:0:0:11,0:391,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:47.3115:11:0:0:11,0:405,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:68.3836:18:0:0:18,0:665,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:53.3321:13:0:0:13,0:492,0:-10,-3.91339,0,-10,-3.91339,-10 1|1:41.2909:9:0:0:9,0:317,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:50.3218:12:0:0:12,0:456,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:80.4248:22:0:0:22,0:829,0:-10,-6.62266,0,-10,-6.62266,-10 1|1:20.2188:2:0:0:2,0:76,0:-7.22,-0.60206,0,-7.22,-0.60206,-7.22 1|1:32.26:6:0:0:6,0:228,0:-10,-1.80618,0,-10,-1.80618,-10 1|1:47.3115:11:0:0:11,0:412,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:44.3012:10:0:0:10,0:375,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:62.363:16:0:0:16,0:577,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:29.2497:5:0:0:5,0:188,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:41.2909:9:0:0:9,0:335,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:62.363:16:0:0:16,0:594,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:50.3218:12:0:0:12,0:429,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:38.2806:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:86.4451:24:0:0:24,0:849,0:-10,-7.22472,0,-10,-7.22472,-10 1|1:38.2806:8:0:0:8,0:303,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:68.3836:18:0:0:18,0:670,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:68.3836:18:0:0:18,0:649,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:56.3424:14:0:0:14,0:510,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:44.3012:10:0:0:10,0:379,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:99:32:0:0:32,0:1207,0:-10,-9.63296,0,-10,-9.63296,-10 1|1:71.3939:20:0:0:19,0:709,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:29.2497:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:99:36:0:0:36,0:1319,0:-10,-10,0,-10,-10,-10 1|1:38.2806:8:0:0:8,0:299,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:99:31:0:0:31,0:1166,0:-10,-9.33193,0,-10,-9.33193,-10 1|1:38.2806:8:0:0:8,0:304,0:-10,-2.40824,0,-10,-2.40824,-10 1|1:35.2703:7:0:0:7,0:266,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:86.4451:26:0:0:24,0:854,0:-10,-7.22472,0,-10,-7.22472,-10 1|1:0.0515486:11:1:23:10,0:378,0:-10,0,-0.0300627,-10,-3.04036,-10 1|1:62.363:16:0:0:16,0:584,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:29.2497:5:0:0:5,0:189,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:50.3218:12:0:0:12,0:455,0:-10,-3.61236,0,-10,-3.61236,-10 1|1:29.2497:5:0:0:5,0:188,0:-10,-1.50515,0,-10,-1.50515,-10 1|1:71.3939:19:0:0:19,0:720,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:59.3527:16:0:0:15,0:564,0:-10,-4.51545,0,-10,-4.51545,-10 1|1:71.3939:19:0:0:19,0:717,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:99:12:0:0:4,8:149,299:-10,-10,-10,-10,0,-10 1|1:41.2909:9:0:0:9,0:341,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:99:26:0:0:16,8:599,269:-10,-10,-10,-10,0,-10 1|1:0.0036814:16:0:0:0,15:0,554:-10,-10,-10,-4.51545,-4.51545,0 0|1:6.55483e-06:10:10:362:0,0:0,0:0,-3.0103,-10,-3.0103,-10,-10 1|1:68.3836:18:0:0:18,0:636,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:47.3115:11:0:0:11,0:412,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:56.3424:15:0:0:14,0:487,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:83.4351:23:0:0:23,0:862,0:-10,-6.92369,0,-10,-6.92369,-10 1|1:56.3424:14:0:0:14,0:490,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:56.3424:14:0:0:14,0:532,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:77.4145:21:0:0:21,0:785,0:-10,-6.32163,0,-10,-6.32163,-10 1|1:47.3115:11:0:0:11,0:418,0:-10,-3.31133,0,-10,-3.31133,-10 1|1:56.3424:14:0:0:14,0:531,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:44.3012:10:0:0:10,0:354,0:-10,-3.0103,0,-10,-3.0103,-10 1|1:26.2394:4:0:0:4,0:152,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:35.2703:7:0:0:7,0:263,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:65.3733:17:0:0:17,0:629,0:-10,-5.11751,0,-10,-5.11751,-10 1|1:65.3733:17:0:0:17,0:635,0:-10,-5.11751,0,-10,-5.11751,-10 1|1:68.3836:18:0:0:18,0:651,0:-10,-5.41854,0,-10,-5.41854,-10 1|1:56.3424:15:0:0:14,0:521,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:62.363:16:0:0:16,0:574,0:-10,-4.81648,0,-10,-4.81648,-10 1|1:35.2703:7:0:0:7,0:262,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:56.3424:14:0:0:14,0:520,0:-10,-4.21442,0,-10,-4.21442,-10 1|1:35.2703:7:0:0:7,0:242,0:-10,-2.10721,0,-10,-2.10721,-10 1|1:26.2394:4:0:0:4,0:149,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:41.2909:9:0:0:9,0:342,0:-10,-2.70927,0,-10,-2.70927,-10 1|1:71.3939:19:0:0:19,0:676,0:-10,-5.71957,0,-10,-5.71957,-10 1|1:41.2909:10:0:0:9,0:319,0:-10,-2.70927,0,-10,-2.70927,-10 scaffold_285 97198 . C T 3554.58 . AB=0.4625;ABP=3.98746;AC=10;AF=0.0543478;AN=184;AO=132;CIGAR=1X;DP=1806;DPB=1806;DPRA=1.49626;EPP=17.8158;EPPR=3.057;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9606;NS=92;NUMALT=1;ODDS=1.17166;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4882;QR=60584;RO=1674;RPP=289.645;RPPR=3638.06;RUN=1;SAF=81;SAP=17.8158;SAR=51;SRF=840;SRP=3.057;SRR=834;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.7271:15:15:500:0:0:0,-4.51545,-10 0/0:29.6756:10:10:355:0:0:0,-3.0103,-10 0/0:50.7477:17:17:533:0:0:0,-5.11751,-10 0/0:41.7168:14:14:512:0:0:0,-4.21442,-10 0/1:99:14:5:189:9:319:-10,0,-10 0/0:35.6962:12:12:448:0:0:0,-3.61236,-10 0/0:99:42:42:1531:0:0:0,-10,-10 0/0:38.7065:13:13:445:0:0:0,-3.91339,-10 0/0:26.6653:9:9:325:0:0:0,-2.70927,-10 0/0:17.6344:6:6:220:0:0:0,-1.80618,-10 0/0:8.60354:3:3:113:0:0:0,-0.90309,-10 0/0:20.6447:7:7:235:0:0:0,-2.10721,-10 0/0:89.8809:30:30:1080:0:0:0,-9.0309,-10 0/0:99:34:34:1203:0:0:0,-10,-10 0/0:56.7683:19:19:708:0:0:0,-5.71957,-10 0/0:62.7889:21:21:765:0:0:0,-6.32163,-10 0/0:59.7786:20:20:753:0:0:0,-6.0206,-10 0/0:20.6447:7:7:257:0:0:0,-2.10721,-10 0/0:86.871:29:29:1070:0:0:0,-8.72987,-10 1/1:99:54:0:0:54:1996:-10,-10,0 0/0:50.7477:17:17:616:0:0:0,-5.11751,-10 0/0:92.8924:31:31:1102:0:0:0,-9.33193,-10 0/0:20.6447:7:7:260:0:0:0,-2.10721,-10 0/0:62.7889:21:21:746:0:0:0,-6.32163,-10 0/0:62.7889:21:21:779:0:0:0,-6.32163,-10 0/0:92.8924:31:31:1124:0:0:0,-9.33193,-10 0/0:71.8198:24:24:897:0:0:0,-7.22472,-10 0/0:23.655:8:8:304:0:0:0,-2.40824,-10 0/0:53.758:18:18:651:0:0:0,-5.41854,-10 0/0:95.9032:32:32:1169:0:0:0,-9.63296,-10 0/0:20.6447:7:7:260:0:0:0,-2.10721,-10 0/0:20.6447:7:7:266:0:0:0,-2.10721,-10 0/0:53.758:18:18:672:0:0:0,-5.41854,-10 0/0:41.7168:14:14:532:0:0:0,-4.21442,-10 0/0:89.8809:30:30:1110:0:0:0,-9.0309,-10 0/0:14.6241:5:5:142:0:0:0,-1.50515,-10 0/0:41.7168:14:14:503:0:0:0,-4.21442,-10 1/1:32.4295:19:0:0:19:705:-10,-5.71957,0 1/1:38.4501:21:0:0:21:791:-10,-6.32163,0 0/0:50.7477:17:17:617:0:0:0,-5.11751,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:56.7683:19:19:668:0:0:0,-5.71957,-10 0/0:68.8095:23:23:833:0:0:0,-6.92369,-10 0/0:99:46:46:1685:0:0:0,-10,-10 0/0:89.8809:30:30:1113:0:0:0,-9.0309,-10 0/0:50.7477:17:17:621:0:0:0,-5.11751,-10 0/0:99:47:47:1723:0:0:0,-10,-10 0/0:89.8809:30:30:1077:0:0:0,-9.0309,-10 0/0:32.6859:11:11:417:0:0:0,-3.31133,-10 0/0:99:41:41:1463:0:0:0,-10,-10 0/0:23.655:8:8:304:0:0:0,-2.40824,-10 0/0:99:38:38:1397:0:0:0,-10,-10 0/0:62.7889:21:21:715:0:0:0,-6.32163,-10 0/0:26.6653:9:9:268:0:0:0,-2.70927,-10 0/0:99:45:45:1577:0:0:0,-10,-10 0/0:38.7065:13:13:438:0:0:0,-3.91339,-10 0/0:62.7889:21:21:764:0:0:0,-6.32163,-10 0/0:17.6344:6:6:204:0:0:0,-1.80618,-10 0/0:56.7683:19:19:668:0:0:0,-5.71957,-10 0/0:26.6653:9:9:301:0:0:0,-2.70927,-10 0/0:95.9032:32:32:1202:0:0:0,-9.63296,-10 0/0:41.7168:14:14:508:0:0:0,-4.21442,-10 0/1:99:41:26:897:15:559:-10,0,-10 0/0:41.7168:14:14:532:0:0:0,-4.21442,-10 0/0:35.6962:12:12:428:0:0:0,-3.61236,-10 0/0:74.8301:25:25:938:0:0:0,-7.52575,-10 0/0:35.6962:12:12:442:0:0:0,-3.61236,-10 0/0:35.6962:12:12:363:0:0:0,-3.61236,-10 0/0:99:37:37:1388:0:0:0,-10,-10 0/0:11.6138:4:4:152:0:0:0,-1.20412,-10 0/0:56.7683:19:19:644:0:0:0,-5.71957,-10 0/0:99:37:37:1348:0:0:0,-10,-10 0/0:53.758:18:18:648:0:0:0,-5.41854,-10 0/0:35.6962:12:12:417:0:0:0,-3.61236,-10 0/0:27.3343:26:25:914:1:38:0,-2.61181,-10 0/0:62.7889:21:21:785:0:0:0,-6.32163,-10 0/0:26.6653:9:9:322:0:0:0,-2.70927,-10 0/0:32.6859:11:11:399:0:0:0,-3.31133,-10 0/0:17.6344:6:6:227:0:0:0,-1.80618,-10 0/0:23.655:8:8:302:0:0:0,-2.40824,-10 0/0:99:36:36:1325:0:0:0,-10,-10 0/1:99:25:12:455:13:474:-10,0,-10 0/0:38.7065:13:13:460:0:0:0,-3.91339,-10 0/0:71.8198:24:24:903:0:0:0,-7.22472,-10 0/0:80.8506:27:27:969:0:0:0,-8.12781,-10 0/1:0.652946:2:2:67:0:0:0,-0.60206,-6.365 0/0:56.7683:19:19:703:0:0:0,-5.71957,-10 0/0:20.6447:7:7:266:0:0:0,-2.10721,-10 0/0:14.6241:5:5:185:0:0:0,-1.50515,-10 0/0:74.8301:25:25:922:0:0:0,-7.52575,-10 0/0:26.6653:9:9:313:0:0:0,-2.70927,-10 0/0:53.758:18:18:633:0:0:0,-5.41854,-10 scaffold_285 104701 . C G 713.62 . AB=0.717949;ABP=19.1015;AC=2;AF=0.0108696;AN=184;AO=28;CIGAR=1X;DP=1900;DPB=1900;DPRA=0.943041;EPP=3.32051;EPPR=4.27554;GTI=1;LEN=1;MEANALT=1.5;MQM=58.6071;MQMR=59.832;NS=92;NUMALT=1;ODDS=5.37433;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1053;QR=68470;RO=1869;RPP=63.8115;RPPR=4061.49;RUN=1;SAF=15;SAP=3.32051;SAR=13;SRF=918;SRP=4.27554;SRR=951;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.2623:13:13:484:0:0:0,-3.91339,-10 0/0:57.2623:13:13:460:0:0:0,-3.91339,-10 0/1:99:23:10:378:13:493:-10,0,-10 0/0:66.2932:16:16:578:0:0:0,-4.81648,-10 0/0:72.3138:18:18:646:0:0:0,-5.41854,-10 0/0:48.2314:10:10:377:0:0:0,-3.0103,-10 0/0:99:57:57:2120:0:0:0,-10,-10 0/0:99:36:36:1303:0:0:0,-10,-10 0/0:60.2726:14:14:468:0:0:0,-4.21442,-10 0/0:33.1799:5:5:176:0:0:0,-1.50515,-10 0/0:33.1799:5:5:186:0:0:0,-1.50515,-10 0/0:57.2623:13:13:475:0:0:0,-3.91339,-10 0/0:99:40:40:1492:0:0:0,-10,-10 0/0:99:31:31:1138:0:0:0,-9.33193,-10 0/0:99:31:31:1151:0:0:0,-9.33193,-10 0/0:99:34:34:1279:0:0:0,-10,-10 0/0:81.3447:21:21:779:0:0:0,-6.32163,-10 0/0:48.2314:10:10:380:0:0:0,-3.0103,-10 0/0:96.3941:26:26:985:0:0:0,-7.82678,-10 0/0:99:33:33:1220:0:0:0,-9.93399,-10 0/0:63.2829:15:15:563:0:0:0,-4.51545,-10 0/0:99:29:29:1076:0:0:0,-8.72987,-10 0/0:51.2417:11:11:414:0:0:0,-3.31133,-10 0/0:66.2932:16:16:601:0:0:0,-4.81648,-10 0/0:57.2623:13:13:487:0:0:0,-3.91339,-10 0/0:99:33:33:1195:0:0:0,-9.93399,-10 0/0:57.2623:13:13:464:0:0:0,-3.91339,-10 0/0:42.2108:8:8:304:0:0:0,-2.40824,-10 0/0:69.3035:17:17:618:0:0:0,-5.11751,-10 0/0:99:39:39:1453:0:0:0,-10,-10 0/0:30.1696:4:4:150:0:0:0,-1.20412,-10 0/0:33.1799:5:5:182:0:0:0,-1.50515,-10 0/0:90.3751:24:24:858:0:0:0,-7.22472,-10 0/0:42.2108:8:8:278:0:0:0,-2.40824,-10 0/0:72.3138:18:18:681:0:0:0,-5.41854,-10 0/0:42.2108:8:8:303:0:0:0,-2.40824,-10 0/0:42.2108:9:8:279:0:0:0,-2.40824,-10 0/0:99:43:42:1453:0:0:0,-10,-10 0/0:57.2623:13:13:494:0:0:0,-3.91339,-10 0/0:84.3549:22:22:811:0:0:0,-6.62266,-10 0/0:99:34:34:1286:0:0:0,-10,-10 0/0:63.2829:15:15:557:0:0:0,-4.51545,-10 0/0:69.3035:17:17:636:0:0:0,-5.11751,-10 0/0:90.3751:24:24:905:0:0:0,-7.22472,-10 0/0:87.3651:23:23:873:0:0:0,-6.92369,-10 0/0:39.2005:7:7:266:0:0:0,-2.10721,-10 0/0:99:42:42:1556:0:0:0,-10,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:66.2932:16:16:546:0:0:0,-4.81648,-10 0/0:99:41:41:1438:0:0:0,-10,-10 0/0:45.2211:9:9:310:0:0:0,-2.70927,-10 0/0:99:38:38:1360:0:0:0,-10,-10 0/0:75.3241:19:19:688:0:0:0,-5.71957,-10 0/0:51.2417:11:11:415:0:0:0,-3.31133,-10 0/0:99:51:51:1864:0:0:0,-10,-10 0/0:51.2417:11:11:414:0:0:0,-3.31133,-10 0/0:81.3447:21:21:686:0:0:0,-6.32163,-10 0/0:33.1799:5:5:185:0:0:0,-1.50515,-10 0/0:60.2726:14:14:526:0:0:0,-4.21442,-10 0/0:33.1799:5:5:165:0:0:0,-1.50515,-10 0/0:99:38:38:1371:0:0:0,-10,-10 0/0:75.3241:19:19:716:0:0:0,-5.71957,-10 0/0:99:45:45:1659:0:0:0,-10,-10 0/0:66.2932:16:16:598:0:0:0,-4.81648,-10 0/0:42.2108:8:8:299:0:0:0,-2.40824,-10 0/0:96.3941:26:26:955:0:0:0,-7.82678,-10 0/0:78.3344:20:20:704:0:0:0,-6.0206,-10 0/0:48.2314:10:10:380:0:0:0,-3.0103,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:42.2108:8:8:294:0:0:0,-2.40824,-10 0/0:84.3549:22:22:824:0:0:0,-6.62266,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:99:30:30:1099:0:0:0,-9.0309,-10 0/0:75.3241:19:19:690:0:0:0,-5.71957,-10 0/0:99:32:32:1115:0:0:0,-9.63296,-10 0/0:54.252:12:12:425:0:0:0,-3.61236,-10 0/1:0.0199889:16:0:0:15:560:-10,-4.51545,0 0/0:75.3241:19:19:674:0:0:0,-5.71957,-10 0/0:48.2314:10:10:357:0:0:0,-3.0103,-10 0/0:63.2829:15:15:563:0:0:0,-4.51545,-10 0/0:99:37:37:1326:0:0:0,-10,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/0:81.3447:21:21:769:0:0:0,-6.32163,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:69.3035:17:17:641:0:0:0,-5.11751,-10 0/0:54.252:12:12:455:0:0:0,-3.61236,-10 0/0:57.2623:13:13:464:0:0:0,-3.91339,-10 0/0:57.2623:13:13:493:0:0:0,-3.91339,-10 0/0:33.1799:5:5:189:0:0:0,-1.50515,-10 0/0:90.3751:24:24:858:0:0:0,-7.22472,-10 0/0:75.3241:19:19:704:0:0:0,-5.71957,-10 0/0:57.2623:13:13:485:0:0:0,-3.91339,-10 scaffold_285 107229 . T C 59162 . AB=0.428571;ABP=5.49198;AC=179;AF=0.972826;AN=184;AO=2007;CIGAR=1X;DP=2064;DPB=2064;DPRA=0;EPP=4.05005;EPPR=3.17115;GTI=2;LEN=1;MEANALT=1.03333;MQM=59.9352;MQMR=59.7222;NS=92;NUMALT=1;ODDS=2.00746;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=72450;QR=1835;RO=54;RPP=4361.16;RPPR=120.27;RUN=1;SAF=988;SAP=4.05005;SAR=1019;SRF=26;SRP=3.17115;SRR=28;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:0.000190057:8:8:284:0:0:0,-2.40824,-10 1/1:41.3934:4:0:0:4:145:-10,-1.20412,0 1/1:80.5272:17:0:0:17:603:-10,-5.11751,0 1/1:71.4963:14:0:0:14:487:-10,-4.21442,0 1/1:68.486:13:0:0:13:476:-10,-3.91339,0 1/1:50.4243:7:0:0:7:262:-10,-2.10721,0 1/1:99:50:0:0:50:1806:-10,-10,0 1/1:99:33:0:0:33:1233:-10,-9.93399,0 1/1:71.4963:14:0:0:14:502:-10,-4.21442,0 1/1:44.4037:5:0:0:5:166:-10,-1.50515,0 1/1:44.4037:5:0:0:5:176:-10,-1.50515,0 1/1:56.4449:9:0:0:9:331:-10,-2.70927,0 1/1:99:33:0:0:33:1168:-10,-9.93399,0 1/1:99:37:0:0:37:1344:-10,-10,0 1/1:99:24:0:0:24:882:-10,-7.22472,0 1/1:99:33:0:0:33:1201:-10,-9.93399,0 1/1:95.5748:22:0:0:22:822:-10,-6.62266,0 1/1:47.414:6:0:0:6:200:-10,-1.80618,0 1/1:99:24:0:0:24:864:-10,-7.22472,0 1/1:99:43:0:0:43:1591:-10,-10,0 1/1:59.7704:19:1:15:18:658:-10,-2.94082,0 1/1:99:33:0:0:33:1234:-10,-9.93399,0 1/1:80.5272:17:0:0:17:598:-10,-5.11751,0 1/1:95.5748:23:0:0:22:822:-10,-6.62266,0 1/1:89.5572:20:0:0:20:713:-10,-6.0206,0 1/1:99:40:0:0:40:1431:-10,-10,0 1/1:86.5474:19:0:0:19:664:-10,-5.71957,0 1/1:77.517:16:0:0:16:536:-10,-4.81648,0 1/1:99:25:0:0:25:914:-10,-7.52575,0 1/1:99:39:0:0:38:1398:-10,-10,0 1/1:56.4449:9:0:0:9:332:-10,-2.70927,0 1/1:50.4243:7:0:0:7:252:-10,-2.10721,0 1/1:83.5373:18:0:0:18:642:-10,-5.41854,0 1/1:80.5272:17:0:0:17:583:-10,-5.11751,0 1/1:92.5683:21:0:0:21:766:-10,-6.32163,0 1/1:56.4449:9:0:0:9:290:-10,-2.70927,0 1/1:83.5373:18:0:0:18:587:-10,-5.41854,0 1/1:99:33:1:15:32:1182:-10,-6.91548,0 1/1:62.4655:11:0:0:11:410:-10,-3.31133,0 1/1:77.517:16:0:0:16:576:-10,-4.81648,0 1/1:99:41:0:0:41:1535:-10,-10,0 1/1:92.5683:21:0:0:21:756:-10,-6.32163,0 1/1:99:34:1:15:33:1212:-10,-7.20354,0 1/1:99:50:1:15:49:1775:-10,-10,0 1/1:86.5474:19:0:0:19:704:-10,-5.71957,0 1/1:68.486:13:0:0:13:416:-10,-3.91339,0 1/1:99:48:0:0:48:1722:-10,-10,0 1/1:99:33:0:0:33:1208:-10,-9.93399,0 1/1:71.4963:14:0:0:14:483:-10,-4.21442,0 1/1:99:41:0:0:41:1436:-10,-10,0 1/1:62.4655:11:0:0:11:418:-10,-3.31133,0 1/1:99:35:0:0:35:1264:-10,-10,0 1/1:80.5272:17:0:0:17:584:-10,-5.11751,0 1/1:53.4346:8:0:0:8:293:-10,-2.40824,0 1/1:99:48:0:0:48:1703:-10,-10,0 1/1:98.5882:23:0:0:23:847:-10,-6.92369,0 1/1:89.5572:20:0:0:20:708:-10,-6.0206,0 1/1:47.414:6:0:0:6:217:-10,-1.80618,0 1/1:99:28:0:0:28:1031:-10,-8.42884,0 1/1:47.414:6:0:0:6:219:-10,-1.80618,0 1/1:99:30:0:0:30:1135:-10,-9.0309,0 1/1:89.5572:21:0:0:20:745:-10,-6.0206,0 1/1:99:44:0:0:44:1587:-10,-10,0 1/1:74.5067:15:0:0:15:538:-10,-4.51545,0 1/1:65.4758:12:0:0:12:404:-10,-3.61236,0 1/1:99:39:0:0:39:1422:-10,-10,0 1/1:95.5748:22:0:0:22:783:-10,-6.62266,0 1/1:77.517:16:0:0:16:569:-10,-4.81648,0 1/1:99:35:0:0:35:1276:-10,-10,0 1/1:71.4963:14:0:0:14:488:-10,-4.21442,0 1/1:99:26:0:0:26:947:-10,-7.82678,0 1/1:99:33:1:14:32:1160:-10,-7.01548,0 1/1:99:33:0:0:33:1218:-10,-9.93399,0 1/1:74.5067:15:0:0:15:531:-10,-4.51545,0 1/1:99:30:0:0:30:1130:-10,-9.0309,0 1/1:99:28:0:0:28:1027:-10,-8.42884,0 1/1:86.5474:19:0:0:19:712:-10,-5.71957,0 0/1:0.000380122:9:9:339:0:0:0,-2.70927,-10 1/1:44.4037:5:0:0:5:185:-10,-1.50515,0 1/1:77.517:16:0:0:16:573:-10,-4.81648,0 0/1:99:29:17:608:12:435:-10,0,-10 1/1:99:35:0:0:35:1163:-10,-10,0 0/1:99:23:14:492:9:335:-10,0,-10 1/1:99:32:0:0:32:1174:-10,-9.63296,0 1/1:99:36:0:0:36:1249:-10,-10,0 1/1:47.414:6:0:0:6:200:-10,-1.80618,0 1/1:99:32:0:0:32:1193:-10,-9.63296,0 1/1:83.5373:18:0:0:18:640:-10,-5.41854,0 0/1:9.2675:4:1:38:3:113:-9.94461,0,-3.19794 1/1:89.5572:20:0:0:20:734:-10,-6.0206,0 1/1:99:25:0:0:25:889:-10,-7.52575,0 1/1:74.5067:15:0:0:15:517:-10,-4.51545,0 scaffold_285 107243 . G A 543.114 . AB=0.7;ABP=13.4334;AC=1;AF=0.00543478;AN=184;AO=21;CIGAR=1X;DP=2069;DPB=2069;DPRA=1.33889;EPP=3.1137;EPPR=4.88248;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9291;NS=92;NUMALT=1;ODDS=5.3356;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=783;QR=75206;RO=2046;RPP=48.6112;RPPR=4437.16;RUN=1;SAF=10;SAP=3.1137;SAR=11;SRF=1003;SRP=4.70842;SRR=1043;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:35.3174:8:8:295:0:0:0,-2.40824,-10 0/0:23.2762:4:4:151:0:0:0,-1.20412,-10 0/0:62.4101:17:17:591:0:0:0,-5.11751,-10 0/0:53.3792:14:14:494:0:0:0,-4.21442,-10 0/0:50.3689:13:13:473:0:0:0,-3.91339,-10 0/0:32.3071:7:7:266:0:0:0,-2.10721,-10 0/0:99:51:51:1861:0:0:0,-10,-10 0/0:99:33:33:1178:0:0:0,-9.93399,-10 0/0:53.3792:14:14:509:0:0:0,-4.21442,-10 0/0:26.2865:5:5:166:0:0:0,-1.50515,-10 0/0:26.2865:5:5:177:0:0:0,-1.50515,-10 0/0:38.3277:9:9:331:0:0:0,-2.70927,-10 0/0:99:33:33:1219:0:0:0,-9.93399,-10 0/0:99:37:37:1355:0:0:0,-10,-10 0/0:83.4822:24:24:908:0:0:0,-7.22472,-10 0/0:99:33:33:1219:0:0:0,-9.93399,-10 0/0:77.4616:22:22:834:0:0:0,-6.62266,-10 0/0:29.2968:6:6:228:0:0:0,-1.80618,-10 0/0:83.4822:24:24:905:0:0:0,-7.22472,-10 0/0:99:43:43:1592:0:0:0,-10,-10 0/0:65.4204:19:18:675:0:0:0,-5.41854,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:62.4101:17:17:615:0:0:0,-5.11751,-10 0/0:80.4719:23:23:849:0:0:0,-6.92369,-10 0/0:71.441:20:20:748:0:0:0,-6.0206,-10 0/0:99:40:40:1446:0:0:0,-10,-10 0/0:74.4513:21:21:764:0:0:0,-6.32163,-10 0/0:59.3998:16:16:569:0:0:0,-4.81648,-10 0/0:86.4925:25:25:942:0:0:0,-7.52575,-10 0/0:99:39:39:1433:0:0:0,-10,-10 0/0:38.3277:9:9:342:0:0:0,-2.70927,-10 0/0:32.3071:7:7:219:0:0:0,-2.10721,-10 0/0:65.4204:18:18:671:0:0:0,-5.41854,-10 0/0:62.4101:17:17:597:0:0:0,-5.11751,-10 0/0:77.4616:22:22:825:0:0:0,-6.62266,-10 0/0:38.3277:9:9:316:0:0:0,-2.70927,-10 0/0:65.4204:18:18:640:0:0:0,-5.41854,-10 0/0:99:33:33:1163:0:0:0,-9.93399,-10 0/0:44.3483:11:11:418:0:0:0,-3.31133,-10 0/0:59.3998:16:16:585:0:0:0,-4.81648,-10 0/0:99:41:41:1521:0:0:0,-10,-10 0/0:74.4513:21:21:771:0:0:0,-6.32163,-10 0/0:99:34:34:1275:0:0:0,-10,-10 0/0:99:50:50:1768:0:0:0,-10,-10 0/0:68.4307:19:19:719:0:0:0,-5.71957,-10 0/0:47.3586:13:12:432:0:0:0,-3.61236,-10 0/0:99:49:49:1775:0:0:0,-10,-10 0/0:99:33:33:1254:0:0:0,-9.93399,-10 0/0:53.3792:14:14:527:0:0:0,-4.21442,-10 0/0:99:41:41:1538:0:0:0,-10,-10 0/0:44.3483:11:11:409:0:0:0,-3.31133,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:62.4101:17:17:615:0:0:0,-5.11751,-10 0/0:35.3174:8:8:295:0:0:0,-2.40824,-10 0/0:99:48:48:1726:0:0:0,-10,-10 0/0:80.4719:23:23:866:0:0:0,-6.92369,-10 0/0:71.441:20:20:715:0:0:0,-6.0206,-10 0/0:29.2968:6:6:205:0:0:0,-1.80618,-10 0/0:95.5229:28:28:991:0:0:0,-8.42884,-10 0/0:29.2968:6:6:224:0:0:0,-1.80618,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:74.4513:21:21:773:0:0:0,-6.32163,-10 0/0:99:44:44:1609:0:0:0,-10,-10 0/0:56.3895:15:15:558:0:0:0,-4.51545,-10 0/0:47.3586:12:12:456:0:0:0,-3.61236,-10 0/0:99:39:39:1456:0:0:0,-10,-10 0/0:77.4616:22:22:833:0:0:0,-6.62266,-10 0/0:59.3998:16:16:597:0:0:0,-4.81648,-10 0/0:99:35:35:1286:0:0:0,-10,-10 0/0:53.3792:14:14:503:0:0:0,-4.21442,-10 0/0:89.5027:26:26:962:0:0:0,-7.82678,-10 0/0:99:33:33:1220:0:0:0,-9.93399,-10 0/0:99:33:33:1195:0:0:0,-9.93399,-10 0/0:56.3895:15:15:558:0:0:0,-4.51545,-10 0/1:99:30:9:342:21:783:-10,0,-10 0/0:95.5229:28:28:1042:0:0:0,-8.42884,-10 0/0:68.4307:19:19:718:0:0:0,-5.71957,-10 0/0:38.3277:9:9:337:0:0:0,-2.70927,-10 0/0:26.2865:5:5:190:0:0:0,-1.50515,-10 0/0:59.3998:16:16:604:0:0:0,-4.81648,-10 0/0:98.5327:29:29:1097:0:0:0,-8.72987,-10 0/0:99:35:35:1256:0:0:0,-10,-10 0/0:80.4719:23:23:842:0:0:0,-6.92369,-10 0/0:99:32:32:1169:0:0:0,-9.63296,-10 0/0:99:36:36:1317:0:0:0,-10,-10 0/0:29.2968:6:6:220:0:0:0,-1.80618,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:65.4204:18:18:663:0:0:0,-5.41854,-10 0/0:23.2762:4:4:152:0:0:0,-1.20412,-10 0/0:71.441:20:20:758:0:0:0,-6.0206,-10 0/0:86.4925:25:25:922:0:0:0,-7.52575,-10 0/0:56.3895:15:15:565:0:0:0,-4.51545,-10 scaffold_285 166994 . G C 177.221 . AB=0.380952;ABP=5.59539;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1985;DPB=1985;DPRA=0.973014;EPP=3.0103;EPPR=5.13997;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9645;NS=92;NUMALT=1;ODDS=13.952;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=302;QR=72607;RO=1974;RPP=20.3821;RPPR=4289.5;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=965;SRP=5.13997;SRR=1009;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:69.6236:7:7:255:0:0:0,-2.10721,-10 0/0:93.7055:15:15:563:0:0:0,-4.51545,-10 0/0:87.6847:13:13:481:0:0:0,-3.91339,-10 0/0:87.6847:13:13:479:0:0:0,-3.91339,-10 0/0:72.6339:8:8:304:0:0:0,-2.40824,-10 0/0:99:36:36:1317:0:0:0,-10,-10 0/0:99:32:32:1204:0:0:0,-9.63296,-10 0/0:87.6847:13:13:476:0:0:0,-3.91339,-10 0/0:66.6133:6:6:228:0:0:0,-1.80618,-10 0/0:72.6339:8:8:295:0:0:0,-2.40824,-10 0/0:60.5927:4:4:152:0:0:0,-1.20412,-10 0/0:99:40:39:1436:0:0:0,-10,-10 0/0:99:42:42:1538:0:0:0,-10,-10 0/0:99:22:22:814:0:0:0,-6.62266,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:99:19:19:714:0:0:0,-5.71957,-10 0/0:81.6647:11:11:405:0:0:0,-3.31133,-10 0/0:99:21:21:748:0:0:0,-6.32163,-10 0/0:99:51:51:1903:0:0:0,-10,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:99:38:38:1388:0:0:0,-10,-10 0/0:69.6236:7:7:235:0:0:0,-2.10721,-10 0/0:99:19:18:658:0:0:0,-5.41854,-10 0/0:99:23:23:857:0:0:0,-6.92369,-10 0/0:99:32:32:1162:0:0:0,-9.63296,-10 0/0:99:18:18:674:0:0:0,-5.41854,-10 0/0:90.6943:14:14:518:0:0:0,-4.21442,-10 0/0:99:19:19:692:0:0:0,-5.71957,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:60.5927:4:4:152:0:0:0,-1.20412,-10 0/0:78.6545:10:10:349:0:0:0,-3.0103,-10 0/0:96.7152:16:16:540:0:0:0,-4.81648,-10 0/0:84.6748:12:12:398:0:0:0,-3.61236,-10 0/0:99:31:31:1166:0:0:0,-9.33193,-10 0/0:60.5927:4:4:129:0:0:0,-1.20412,-10 0/0:96.7152:16:16:603:0:0:0,-4.81648,-10 0/0:99:35:35:1278:0:0:0,-10,-10 0/0:93.7055:15:15:541:0:0:0,-4.51545,-10 0/0:99:19:19:702:0:0:0,-5.71957,-10 0/0:99:36:36:1343:0:0:0,-10,-10 0/0:99:26:26:955:0:0:0,-7.82678,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:99:32:32:1123:0:0:0,-9.63296,-10 0/0:99:23:23:816:0:0:0,-6.92369,-10 0/0:90.6943:14:14:523:0:0:0,-4.21442,-10 0/0:99:37:37:1364:0:0:0,-10,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:75.6442:9:9:329:0:0:0,-2.70927,-10 0/0:99:49:49:1794:0:0:0,-10,-10 0/0:87.6847:13:13:483:0:0:0,-3.91339,-10 0/0:99:34:34:1282:0:0:0,-10,-10 0/0:99:19:19:718:0:0:0,-5.71957,-10 0/0:72.6339:8:8:285:0:0:0,-2.40824,-10 0/0:99:55:55:1979:0:0:0,-10,-10 0/0:81.6647:11:11:410:0:0:0,-3.31133,-10 0/0:99:30:30:1125:0:0:0,-9.0309,-10 0/0:84.6748:12:12:450:0:0:0,-3.61236,-10 0/0:96.7152:16:16:590:0:0:0,-4.81648,-10 0/0:99:18:18:671:0:0:0,-5.41854,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:99:49:49:1788:0:0:0,-10,-10 0/0:96.7152:16:16:605:0:0:0,-4.81648,-10 0/0:81.6647:11:11:389:0:0:0,-3.31133,-10 0/0:99:35:35:1317:0:0:0,-10,-10 0/0:99:19:19:678:0:0:0,-5.71957,-10 0/0:87.6847:13:13:480:0:0:0,-3.91339,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:96.7152:16:16:585:0:0:0,-4.81648,-10 0/0:99:20:20:756:0:0:0,-6.0206,-10 0/0:99:31:31:1162:0:0:0,-9.33193,-10 0/1:99:21:13:488:8:302:-10,0,-10 0/0:99:22:22:831:0:0:0,-6.62266,-10 0/0:99:35:35:1273:0:0:0,-10,-10 0/0:81.6647:11:11:412:0:0:0,-3.31133,-10 0/0:99:24:24:875:0:0:0,-7.22472,-10 0/0:84.6748:12:12:446:0:0:0,-3.61236,-10 0/0:72.6339:8:8:304:0:0:0,-2.40824,-10 0/0:81.6647:11:11:413:0:0:0,-3.31133,-10 0/0:99:32:32:1141:0:0:0,-9.63296,-10 0/0:99:37:36:1323:0:0:0,-10,-10 0/0:99:31:31:1175:0:0:0,-9.33193,-10 0/0:99:20:20:738:0:0:0,-6.0206,-10 0/0:99:21:21:745:0:0:0,-6.32163,-10 0/0:66.6133:6:6:228:0:0:0,-1.80618,-10 0/0:81.6647:11:11:412:0:0:0,-3.31133,-10 0/0:81.6647:11:11:395:0:0:0,-3.31133,-10 0/0:60.5927:4:4:130:0:0:0,-1.20412,-10 0/0:75.6442:9:9:341:0:0:0,-2.70927,-10 0/0:99:22:22:808:0:0:0,-6.62266,-10 0/0:99:23:23:848:0:0:0,-6.92369,-10 scaffold_285 167035 . G A 7762.38 . AB=0.4447;ABP=14.5381;AC=28;AF=0.152174;AN=184;AO=294;CIGAR=1X;DP=1984;DPB=1984;DPRA=1.21649;EPP=8.80089;EPPR=4.58523;GTI=3;LEN=1;MEANALT=1.03704;MQM=59.7993;MQMR=59.9935;NS=92;NUMALT=1;ODDS=0.595684;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10550;QR=61650;RO=1689;RPP=641.423;RPPR=3670.63;RUN=1;SAF=133;SAP=8.80089;SAR=161;SRF=827;SRP=4.58523;SRR=862;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:37.3116:7:7:265:0:0:0,-2.10721,-10 0/0:61.394:15:15:564:0:0:0,-4.51545,-10 0/0:0.740373:13:12:444:1:38:-1.00055,0,-10 0/0:55.3734:13:13:485:0:0:0,-3.91339,-10 0/0:40.3219:8:8:304:0:0:0,-2.40824,-10 0/0:99:35:35:1270:0:0:0,-10,-10 0/0:99:32:32:1190:0:0:0,-9.63296,-10 0/0:55.3734:13:13:488:0:0:0,-3.91339,-10 0/0:34.3013:6:6:225:0:0:0,-1.80618,-10 0/0:40.3219:8:8:274:0:0:0,-2.40824,-10 0/0:28.2807:4:4:152:0:0:0,-1.20412,-10 0/0:99:40:40:1465:0:0:0,-10,-10 0/0:99:42:42:1472:0:0:0,-10,-10 0/0:82.4661:22:22:728:0:0:0,-6.62266,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:73.4352:19:19:719:0:0:0,-5.71957,-10 0/0:49.3528:11:11:403:0:0:0,-3.31133,-10 0/1:99:21:10:356:11:372:-10,0,-10 0/0:99:51:51:1826:0:0:0,-10,-10 0/0:99:29:29:1071:0:0:0,-8.72987,-10 0/0:99:39:39:1424:0:0:0,-10,-10 0/1:0.605366:7:0:0:7:238:-10,-2.10721,0 1/1:41.7121:20:0:0:19:671:-10,-5.71957,0 0/0:85.4763:23:23:826:0:0:0,-6.92369,-10 0/1:99:32:17:610:15:506:-10,0,-10 0/0:70.4249:18:18:673:0:0:0,-5.41854,-10 0/0:61.394:15:15:557:0:0:0,-4.51545,-10 1/1:41.7121:19:0:0:19:648:-10,-5.71957,0 0/1:99:33:12:456:21:772:-10,0,-10 0/1:0.0712143:4:0:0:4:152:-10,-1.20412,0 0/0:46.3425:10:10:376:0:0:0,-3.0103,-10 0/0:67.4146:17:17:615:0:0:0,-5.11751,-10 0/0:52.3631:12:12:419:0:0:0,-3.61236,-10 0/0:99:29:29:1099:0:0:0,-8.72987,-10 0/0:28.2807:4:4:152:0:0:0,-1.20412,-10 0/0:64.4043:16:16:589:0:0:0,-4.81648,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:61.394:15:15:547:0:0:0,-4.51545,-10 0/1:99:18:7:252:11:358:-10,0,-10 0/1:99:36:21:790:15:565:-10,0,-10 0/0:94.5066:26:26:960:0:0:0,-7.82678,-10 0/0:99:29:29:1070:0:0:0,-8.72987,-10 0/1:99:32:16:595:16:573:-10,0,-10 0/1:99:23:15:520:8:297:-10,0,-10 0/1:99:14:7:262:7:265:-10,0,-10 0/1:99:37:22:789:15:550:-10,0,-10 0/1:99:31:20:701:11:418:-10,0,-10 1/1:11.6091:9:0:0:9:337:-10,-2.70927,0 0/1:99:49:29:1046:20:707:-10,0,-10 1/1:23.6503:13:0:0:13:475:-10,-3.91339,0 0/1:99:34:21:788:13:488:-10,0,-10 0/0:73.4352:19:19:722:0:0:0,-5.71957,-10 1/1:8.5988:8:0:0:8:280:-10,-2.40824,0 0/0:99:55:55:1962:0:0:0,-10,-10 0/0:52.3631:12:12:450:0:0:0,-3.61236,-10 1/1:27.0227:29:1:33:28:1045:-10,-3.96747,0 0/0:52.3631:12:12:437:0:0:0,-3.61236,-10 0/0:64.4043:16:16:602:0:0:0,-4.81648,-10 0/0:70.4249:18:18:674:0:0:0,-5.41854,-10 0/0:99:35:35:1281:0:0:0,-10,-10 0/0:97.5162:27:27:1015:0:0:0,-8.12781,-10 0/0:99:49:48:1729:1:15:0,-10,-10 0/0:18.9244:17:16:607:1:38:0,-0.087061,-10 0/0:49.3528:11:11:353:0:0:0,-3.31133,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:73.4352:19:19:715:0:0:0,-5.71957,-10 0/0:52.3631:12:12:425:0:0:0,-3.61236,-10 0/1:7.82213:26:24:874:2:76:-1.9051,0,-10 0/0:64.4043:16:16:575:0:0:0,-4.81648,-10 0/0:76.4455:20:20:741:0:0:0,-6.0206,-10 0/0:99:31:31:1171:0:0:0,-9.33193,-10 0/0:79.4558:21:21:713:0:0:0,-6.32163,-10 0/0:79.4558:21:21:796:0:0:0,-6.32163,-10 0/0:95.7096:35:34:1264:1:14:0,-7.59198,-10 0/0:49.3528:11:11:416:0:0:0,-3.31133,-10 0/0:88.4865:24:24:854:0:0:0,-7.22472,-10 0/0:52.3631:12:12:456:0:0:0,-3.61236,-10 0/0:40.3219:8:8:298:0:0:0,-2.40824,-10 0/0:49.3528:11:11:415:0:0:0,-3.31133,-10 0/0:99:32:32:1129:0:0:0,-9.63296,-10 0/1:99:37:20:714:17:638:-10,0,-10 0/0:99:30:30:1132:0:0:0,-9.0309,-10 0/0:52.9865:20:19:678:1:14:0,-3.31957,-10 0/0:79.4558:21:21:768:0:0:0,-6.32163,-10 0/0:34.3013:6:6:228:0:0:0,-1.80618,-10 0/0:49.3528:11:11:407:0:0:0,-3.31133,-10 0/0:49.3528:11:11:383:0:0:0,-3.31133,-10 0/0:28.2807:4:4:152:0:0:0,-1.20412,-10 0/0:43.3322:9:9:300:0:0:0,-2.70927,-10 0/0:82.4661:22:22:734:0:0:0,-6.62266,-10 0/0:85.4763:23:23:829:0:0:0,-6.92369,-10 scaffold_285 243887 . G A 445.436 . AB=0.452381;ABP=3.83753;AC=2;AF=0.0108696;AN=184;AO=21;CIGAR=1X;DP=1558;DPB=1558;DPRA=1.17512;EPP=5.59539;EPPR=6.40685;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=6.66145;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=722;QR=55575;RO=1535;RPP=48.6112;RPPR=3207.21;RUN=1;SAF=13;SAP=5.59539;SAR=8;SRF=758;SRP=3.52098;SRR=777;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.0693:11:11:394:0:0:0,-3.31133,-10 0/0:56.059:10:10:377:0:0:0,-3.0103,-10 0/0:56.059:10:10:346:0:0:0,-3.0103,-10 0/0:59.0693:11:11:394:0:0:0,-3.31133,-10 0/0:28.9413:10:9:340:1:16:0,-0.4103,-10 0/0:44.0178:6:6:205:0:0:0,-1.80618,-10 0/0:92.1822:22:22:813:0:0:0,-6.62266,-10 0/0:74.1208:16:16:602:0:0:0,-4.81648,-10 0/0:80.1413:18:18:661:0:0:0,-5.41854,-10 0/0:44.0178:6:6:225:0:0:0,-1.80618,-10 0/0:44.0178:6:6:212:0:0:0,-1.80618,-10 0/0:44.0178:7:6:226:0:0:0,-1.80618,-10 0/0:75.8027:27:26:902:1:16:0,-5.09645,-10 0/0:92.1822:22:22:773:0:0:0,-6.62266,-10 0/0:80.1413:18:18:674:0:0:0,-5.41854,-10 0/0:83.1517:19:19:700:0:0:0,-5.71957,-10 0/0:89.1721:21:21:796:0:0:0,-6.32163,-10 0/0:41.0075:5:5:184:0:0:0,-1.50515,-10 0/0:71.1105:15:15:550:0:0:0,-4.51545,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:77.1311:17:17:623:0:0:0,-5.11751,-10 0/0:92.1822:22:22:753:0:0:0,-6.62266,-10 0/0:37.9972:4:4:141:0:0:0,-1.20412,-10 0/0:89.1721:21:21:796:0:0:0,-6.32163,-10 0/0:80.1413:18:18:609:0:0:0,-5.41854,-10 0/0:99:29:29:1088:0:0:0,-8.72987,-10 0/0:74.1208:16:16:591:0:0:0,-4.81648,-10 0/0:53.0487:9:9:320:0:0:0,-2.70927,-10 0/0:83.1517:19:19:692:0:0:0,-5.71957,-10 0/0:99:34:34:1210:0:0:0,-10,-10 0/0:56.059:10:10:354:0:0:0,-3.0103,-10 0/0:41.0075:5:5:190:0:0:0,-1.50515,-10 0/0:98.195:24:24:831:0:0:0,-7.22472,-10 0/0:50.0384:8:8:301:0:0:0,-2.40824,-10 0/0:71.1105:15:15:543:0:0:0,-4.51545,-10 0/0:56.059:10:10:367:0:0:0,-3.0103,-10 0/0:50.0384:8:8:256:0:0:0,-2.40824,-10 0/0:92.1822:22:22:829:0:0:0,-6.62266,-10 0/0:59.0693:11:11:401:0:0:0,-3.31133,-10 0/0:56.059:10:10:356:0:0:0,-3.0103,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:98.195:24:24:875:0:0:0,-7.22472,-10 0/0:65.0899:13:13:493:0:0:0,-3.91339,-10 0/0:99:32:32:1146:0:0:0,-9.63296,-10 0/0:86.1619:20:20:747:0:0:0,-6.0206,-10 0/0:59.0693:11:11:406:0:0:0,-3.31133,-10 0/0:99:47:47:1714:0:0:0,-10,-10 0/0:86.1619:20:20:669:0:0:0,-6.0206,-10 0/0:44.0178:6:6:218:0:0:0,-1.80618,-10 0/0:99:31:31:1066:0:0:0,-9.33193,-10 0/0:47.0281:7:7:219:0:0:0,-2.10721,-10 0/0:99:45:45:1666:0:0:0,-10,-10 0/0:71.1105:15:15:507:0:0:0,-4.51545,-10 0/0:44.0178:6:6:222:0:0:0,-1.80618,-10 0/0:99:42:42:1527:0:0:0,-10,-10 0/0:53.0487:9:9:342:0:0:0,-2.70927,-10 0/0:83.1517:19:19:694:0:0:0,-5.71957,-10 0/0:47.0281:7:7:251:0:0:0,-2.10721,-10 0/0:74.1208:17:16:602:0:0:0,-4.81648,-10 0/0:59.0693:11:11:394:0:0:0,-3.31133,-10 0/0:99:31:31:1160:0:0:0,-9.33193,-10 0/0:86.1619:20:20:753:0:0:0,-6.0206,-10 0/0:99:42:42:1560:0:0:0,-10,-10 0/0:68.1002:14:14:498:0:0:0,-4.21442,-10 0/0:53.0487:9:9:341:0:0:0,-2.70927,-10 0/0:99:27:27:927:0:0:0,-8.12781,-10 0/0:68.1002:14:14:473:0:0:0,-4.21442,-10 0/0:47.0281:7:7:266:0:0:0,-2.10721,-10 0/0:99:38:38:1345:0:0:0,-10,-10 0/0:65.0899:13:13:475:0:0:0,-3.91339,-10 0/0:86.1619:20:20:732:0:0:0,-6.0206,-10 0/0:99:27:27:937:0:0:0,-8.12781,-10 0/1:99:19:8:297:11:388:-10,0,-10 0/0:47.0281:7:7:262:0:0:0,-2.10721,-10 0/1:99:23:15:499:8:302:-10,0,-10 0/0:71.1105:15:15:514:0:0:0,-4.51545,-10 0/0:56.059:10:10:360:0:0:0,-3.0103,-10 0/0:65.0899:13:13:490:0:0:0,-3.91339,-10 0/0:50.0384:8:8:303:0:0:0,-2.40824,-10 0/0:47.0281:7:7:260:0:0:0,-2.10721,-10 0/0:98.195:24:24:898:0:0:0,-7.22472,-10 0/0:98.195:24:24:896:0:0:0,-7.22472,-10 0/0:86.1619:20:20:707:0:0:0,-6.0206,-10 0/0:86.1619:20:20:742:0:0:0,-6.0206,-10 0/0:89.1721:21:21:768:0:0:0,-6.32163,-10 0/0:37.9972:4:4:124:0:0:0,-1.20412,-10 0/0:77.1311:17:17:617:0:0:0,-5.11751,-10 0/0:80.1413:18:18:647:0:0:0,-5.41854,-10 0/0:34.9869:3:3:110:0:0:0,-0.90309,-10 0/0:62.0796:12:12:455:0:0:0,-3.61236,-10 0/0:44.0178:6:6:223:0:0:0,-1.80618,-10 0/0:59.0693:11:11:380:0:0:0,-3.31133,-10 scaffold_285 243888 . G A 506.52 . AB=0.540541;ABP=3.5385;AC=2;AF=0.0108696;AN=184;AO=20;CIGAR=1X;DP=1558;DPB=1558;DPRA=1.09467;EPP=3.0103;EPPR=6.98402;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=7.64806;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=730;QR=55716;RO=1535;RPP=38.1882;RPPR=3190.2;RUN=1;SAF=11;SAP=3.44459;SAR=9;SRF=758;SRP=3.52098;SRR=777;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.3055:11:11:383:0:0:0,-3.31133,-10 0/0:54.2952:10:10:379:0:0:0,-3.0103,-10 0/0:54.2952:10:10:351:0:0:0,-3.0103,-10 0/0:57.3055:11:11:405:0:0:0,-3.31133,-10 0/0:54.2952:10:10:374:0:0:0,-3.0103,-10 0/0:42.254:6:6:211:0:0:0,-1.80618,-10 0/1:99:22:10:375:12:429:-10,0,-10 0/0:72.357:16:16:595:0:0:0,-4.81648,-10 0/0:78.3775:18:18:668:0:0:0,-5.41854,-10 0/0:42.254:6:6:226:0:0:0,-1.80618,-10 0/0:42.254:6:6:225:0:0:0,-1.80618,-10 0/0:45.2643:7:7:264:0:0:0,-2.10721,-10 0/0:99:27:26:919:0:0:0,-7.82678,-10 0/0:90.4187:22:22:782:0:0:0,-6.62266,-10 0/0:78.3775:18:18:626:0:0:0,-5.41854,-10 0/0:81.3877:19:19:694:0:0:0,-5.71957,-10 0/0:87.4084:21:21:797:0:0:0,-6.32163,-10 0/0:39.2437:5:5:189:0:0:0,-1.50515,-10 0/1:99:15:7:259:8:301:-10,0,-10 0/0:99:30:30:1092:0:0:0,-9.0309,-10 0/0:75.3673:17:17:593:0:0:0,-5.11751,-10 0/0:90.4187:22:22:813:0:0:0,-6.62266,-10 0/0:36.2334:4:4:148:0:0:0,-1.20412,-10 0/0:84.3979:21:20:733:0:0:0,-6.0206,-10 0/0:78.3775:18:18:600:0:0:0,-5.41854,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:72.357:16:16:597:0:0:0,-4.81648,-10 0/0:51.2849:9:9:341:0:0:0,-2.70927,-10 0/0:81.3877:19:19:657:0:0:0,-5.71957,-10 0/0:99:34:34:1228:0:0:0,-10,-10 0/0:54.2952:10:10:368:0:0:0,-3.0103,-10 0/0:39.2437:5:5:190:0:0:0,-1.50515,-10 0/0:96.4348:24:24:822:0:0:0,-7.22472,-10 0/0:48.2746:8:8:297:0:0:0,-2.40824,-10 0/0:69.3467:15:15:549:0:0:0,-4.51545,-10 0/0:54.2952:10:10:352:0:0:0,-3.0103,-10 0/0:48.2746:8:8:296:0:0:0,-2.40824,-10 0/0:90.4187:22:22:834:0:0:0,-6.62266,-10 0/0:57.3055:11:11:415:0:0:0,-3.31133,-10 0/0:54.2952:10:10:332:0:0:0,-3.0103,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:96.4348:24:24:871:0:0:0,-7.22472,-10 0/0:63.3261:13:13:481:0:0:0,-3.91339,-10 0/0:99:32:32:1163:0:0:0,-9.63296,-10 0/0:84.3979:20:20:736:0:0:0,-6.0206,-10 0/0:57.3055:11:11:414:0:0:0,-3.31133,-10 0/0:99:47:47:1701:0:0:0,-10,-10 0/0:84.3979:20:20:709:0:0:0,-6.0206,-10 0/0:42.254:6:6:219:0:0:0,-1.80618,-10 0/0:99:31:30:1065:0:0:0,-9.0309,-10 0/0:45.2643:7:7:251:0:0:0,-2.10721,-10 0/0:99:45:45:1631:0:0:0,-10,-10 0/0:69.3467:15:15:544:0:0:0,-4.51545,-10 0/0:42.254:6:6:224:0:0:0,-1.80618,-10 0/0:99:42:42:1503:0:0:0,-10,-10 0/0:51.2849:9:9:342:0:0:0,-2.70927,-10 0/0:81.3877:19:19:708:0:0:0,-5.71957,-10 0/0:45.2643:7:7:248:0:0:0,-2.10721,-10 0/0:75.3673:17:17:632:0:0:0,-5.11751,-10 0/0:57.3055:11:11:398:0:0:0,-3.31133,-10 0/0:99:31:31:1159:0:0:0,-9.33193,-10 0/0:84.3979:20:20:759:0:0:0,-6.0206,-10 0/0:99:42:42:1530:0:0:0,-10,-10 0/0:66.3364:14:14:502:0:0:0,-4.21442,-10 0/0:51.2849:9:9:328:0:0:0,-2.70927,-10 0/0:99:27:27:964:0:0:0,-8.12781,-10 0/0:66.3364:14:14:513:0:0:0,-4.21442,-10 0/0:45.2643:7:7:266:0:0:0,-2.10721,-10 0/0:99:38:38:1379:0:0:0,-10,-10 0/0:63.3261:13:13:468:0:0:0,-3.91339,-10 0/0:84.3979:20:20:699:0:0:0,-6.0206,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:81.3877:19:19:638:0:0:0,-5.71957,-10 0/0:45.2643:7:7:242:0:0:0,-2.10721,-10 0/0:93.429:23:23:803:0:0:0,-6.92369,-10 0/0:69.3467:15:15:522:0:0:0,-4.51545,-10 0/0:54.2952:10:10:363:0:0:0,-3.0103,-10 0/0:63.3261:13:13:470:0:0:0,-3.91339,-10 0/0:48.2746:8:8:297:0:0:0,-2.40824,-10 0/0:45.2643:7:7:266:0:0:0,-2.10721,-10 0/0:96.4348:24:24:877:0:0:0,-7.22472,-10 0/0:96.4348:24:24:869:0:0:0,-7.22472,-10 0/0:84.3979:20:20:733:0:0:0,-6.0206,-10 0/0:84.3979:20:20:749:0:0:0,-6.0206,-10 0/0:87.4084:21:21:781:0:0:0,-6.32163,-10 0/0:36.2334:4:4:145:0:0:0,-1.20412,-10 0/0:75.3673:17:17:591:0:0:0,-5.11751,-10 0/0:78.3775:18:18:663:0:0:0,-5.41854,-10 0/0:33.2231:3:3:114:0:0:0,-0.90309,-10 0/0:60.3158:12:12:449:0:0:0,-3.61236,-10 0/0:42.254:6:6:221:0:0:0,-1.80618,-10 0/0:57.3055:11:11:384:0:0:0,-3.31133,-10 scaffold_285 245812 . G A 4830.66 . AB=0.469027;ABP=3.95191;AC=15;AF=0.0815217;AN=184;AO=179;CIGAR=1X;DP=1762;DPB=1762;DPRA=1.37944;EPP=3.99292;EPPR=4.41585;GTI=1;LEN=1;MEANALT=1;MQM=59.9274;MQMR=59.9595;NS=92;NUMALT=1;ODDS=0.237006;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6571;QR=57453;RO=1582;RPP=391.704;RPPR=3334.84;RUN=1;SAF=85;SAP=3.99292;SAR=94;SRF=819;SRP=7.31481;SRR=763;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.1468:20:20:736:0:0:0,-6.0206,-10 0/0:21.0129:7:7:245:0:0:0,-2.10721,-10 0/0:75.1982:25:25:935:0:0:0,-7.52575,-10 0/0:42.085:14:14:489:0:0:0,-4.21442,-10 0/0:36.0644:12:12:443:0:0:0,-3.61236,-10 0/0:36.0644:12:12:440:0:0:0,-3.61236,-10 0/0:99:39:39:1421:0:0:0,-10,-10 0/0:84.2289:28:28:993:0:0:0,-8.42884,-10 0/0:27.0335:9:9:340:0:0:0,-2.70927,-10 0/0:8.97166:3:3:114:0:0:0,-0.90309,-10 0/0:27.0335:9:9:339:0:0:0,-2.70927,-10 0/0:18.0026:6:6:218:0:0:0,-1.80618,-10 0/0:81.2188:27:27:994:0:0:0,-8.12781,-10 0/0:99:37:37:1375:0:0:0,-10,-10 0/0:63.1571:21:21:780:0:0:0,-6.32163,-10 0/0:51.1159:17:17:588:0:0:0,-5.11751,-10 0/0:66.1674:22:22:793:0:0:0,-6.62266,-10 0/0:27.0335:9:9:337:0:0:0,-2.70927,-10 0/0:60.1468:20:20:697:0:0:0,-6.0206,-10 0/1:99:32:16:563:16:596:-10,0,-10 0/1:83.7069:16:13:477:3:110:-8.19837,0,-10 0/0:72.1879:24:24:874:0:0:0,-7.22472,-10 0/0:18.0026:6:6:228:0:0:0,-1.80618,-10 0/0:66.1674:22:22:832:0:0:0,-6.62266,-10 0/0:57.1365:19:19:719:0:0:0,-5.71957,-10 0/0:90.2489:30:30:1100:0:0:0,-9.0309,-10 0/0:54.1262:18:18:668:0:0:0,-5.41854,-10 0/0:33.0541:11:11:399:0:0:0,-3.31133,-10 0/0:81.2188:27:27:1024:0:0:0,-8.12781,-10 0/0:99:39:39:1414:0:0:0,-10,-10 0/0:14.9923:5:5:190:0:0:0,-1.50515,-10 0/0:30.0438:10:10:371:0:0:0,-3.0103,-10 0/0:66.1674:22:22:787:0:0:0,-6.62266,-10 0/0:36.0644:12:12:445:0:0:0,-3.61236,-10 0/0:66.1674:22:22:801:0:0:0,-6.62266,-10 0/0:21.0129:7:7:244:0:0:0,-2.10721,-10 0/1:0.129674:9:0:0:9:331:-10,-2.70927,0 0/0:93.2583:31:31:1127:0:0:0,-9.33193,-10 0/0:27.0335:9:9:333:0:0:0,-2.70927,-10 0/0:21.0129:7:7:244:0:0:0,-2.10721,-10 0/0:69.1777:23:23:807:0:0:0,-6.92369,-10 0/0:48.1056:16:16:604:0:0:0,-4.81648,-10 0/0:45.0953:15:15:553:0:0:0,-4.51545,-10 0/0:99:35:34:1238:0:0:0,-10,-10 0/0:63.1571:21:21:789:0:0:0,-6.32163,-10 0/0:57.1365:19:19:687:0:0:0,-5.71957,-10 0/0:99:38:38:1311:0:0:0,-10,-10 0/0:99:38:38:1418:0:0:0,-10,-10 0/0:45.0953:15:15:531:0:0:0,-4.51545,-10 0/0:87.239:29:29:1078:0:0:0,-8.72987,-10 0/0:54.1262:18:18:623:0:0:0,-5.41854,-10 0/0:99:36:36:1293:0:0:0,-10,-10 0/0:27.0335:9:9:333:0:0:0,-2.70927,-10 0/0:11.982:4:4:150:0:0:0,-1.20412,-10 0/0:99:42:42:1562:0:0:0,-10,-10 0/0:33.0541:11:11:418:0:0:0,-3.31133,-10 0/0:48.1056:16:16:584:0:0:0,-4.81648,-10 0/0:21.0129:7:7:251:0:0:0,-2.10721,-10 0/0:39.0747:13:13:426:0:0:0,-3.91339,-10 0/0:30.0438:10:10:370:0:0:0,-3.0103,-10 0/0:66.1674:22:22:790:0:0:0,-6.62266,-10 0/0:63.1571:21:21:766:0:0:0,-6.32163,-10 0/0:99:47:47:1718:0:0:0,-10,-10 0/0:81.2188:27:27:979:0:0:0,-8.12781,-10 0/0:39.0747:13:13:471:0:0:0,-3.91339,-10 1/1:80.0097:35:0:0:35:1285:-10,-10,0 1/1:28.8345:18:0:0:18:670:-10,-5.41854,0 0/0:36.0644:12:12:395:0:0:0,-3.61236,-10 0/0:99:35:35:1251:0:0:0,-10,-10 0/0:27.0335:9:9:342:0:0:0,-2.70927,-10 1/1:13.783:13:0:0:13:494:-10,-3.91339,0 1/1:86.0303:37:0:0:37:1371:-10,-10,0 1/1:40.8757:22:0:0:22:801:-10,-6.62266,0 0/0:18.0026:6:6:225:0:0:0,-1.80618,-10 0/1:99:27:16:547:11:369:-10,0,-10 0/0:42.085:14:14:504:0:0:0,-4.21442,-10 0/0:30.0438:10:10:374:0:0:0,-3.0103,-10 0/0:39.0747:13:13:467:0:0:0,-3.91339,-10 0/0:18.0026:6:6:205:0:0:0,-1.80618,-10 0/0:33.0541:11:11:407:0:0:0,-3.31133,-10 0/0:69.5723:40:39:1444:1:38:0,-6.63914,-10 0/1:99:29:15:562:14:506:-10,0,-10 0/0:75.1982:25:25:881:0:0:0,-7.52575,-10 0/0:63.1571:21:21:741:0:0:0,-6.32163,-10 0/0:75.1982:25:25:917:0:0:0,-7.52575,-10 0/0:5.96136:2:2:74:0:0:0,-0.60206,-7.03 0/0:93.2583:31:31:1083:0:0:0,-9.33193,-10 0/0:39.0747:13:13:427:0:0:0,-3.91339,-10 0/0:18.0026:6:6:228:0:0:0,-1.80618,-10 0/0:27.0335:9:9:307:0:0:0,-2.70927,-10 0/0:48.1056:16:16:582:0:0:0,-4.81648,-10 0/0:51.1159:17:17:623:0:0:0,-5.11751,-10 scaffold_285 245816 . T A 7966.13 . AB=0.561069;ABP=11.4973;AC=24;AF=0.130435;AN=184;AO=291;CIGAR=1X;DP=1789;DPB=1789;DPRA=1.37908;EPP=12.1514;EPPR=5.81669;GTI=2;LEN=1;MEANALT=1;MQM=59.9347;MQMR=59.9613;NS=92;NUMALT=1;ODDS=0.0999034;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=10541;QR=54689;RO=1498;RPP=617.656;RPPR=3143.94;RUN=1;SAF=165;SAP=14.3602;SAR=126;SRF=740;SRP=3.47996;SRR=758;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.3235:20:20:750:0:0:0,-6.0206,-10 0/0:23.1999:8:8:290:0:0:0,-2.40824,-10 0/0:74.375:25:25:905:0:0:0,-7.52575,-10 0/0:44.272:15:15:524:0:0:0,-4.51545,-10 0/0:35.2411:12:12:423:0:0:0,-3.61236,-10 0/0:35.2411:12:12:443:0:0:0,-3.61236,-10 0/0:99:40:40:1473:0:0:0,-10,-10 0/0:83.4058:28:28:986:0:0:0,-8.42884,-10 0/0:26.2102:9:9:330:0:0:0,-2.70927,-10 0/1:1.26408:3:3:114:0:0:0,-0.90309,-10 0/0:26.2102:9:9:340:0:0:0,-2.70927,-10 0/0:17.1793:6:6:218:0:0:0,-1.80618,-10 0/0:89.4268:30:30:1124:0:0:0,-9.0309,-10 0/0:99:37:37:1381:0:0:0,-10,-10 0/0:71.3647:24:24:890:0:0:0,-7.22472,-10 0/0:50.2926:17:17:632:0:0:0,-5.11751,-10 0/0:68.3544:23:23:845:0:0:0,-6.92369,-10 0/0:26.2102:9:9:338:0:0:0,-2.70927,-10 0/0:59.3235:20:20:692:0:0:0,-6.0206,-10 0/0:95.4449:32:32:1132:0:0:0,-9.63296,-10 0/0:47.2823:16:16:591:0:0:0,-4.81648,-10 0/0:74.375:25:25:910:0:0:0,-7.52575,-10 1/1:9.52364:7:0:0:7:243:-10,-2.10721,0 0/1:99:23:11:409:12:433:-10,0,-10 0/0:56.3132:19:19:714:0:0:0,-5.71957,-10 0/0:89.4268:30:30:1111:0:0:0,-9.0309,-10 0/0:53.3029:18:18:682:0:0:0,-5.41854,-10 0/0:32.2308:11:11:404:0:0:0,-3.31133,-10 0/0:80.3957:27:27:1016:0:0:0,-8.12781,-10 0/0:99:39:39:1399:0:0:0,-10,-10 0/0:14.169:5:5:177:0:0:0,-1.50515,-10 0/0:29.2205:10:10:378:0:0:0,-3.0103,-10 0/0:65.3441:22:22:810:0:0:0,-6.62266,-10 0/0:35.2411:12:12:451:0:0:0,-3.61236,-10 0/0:65.3441:22:22:821:0:0:0,-6.62266,-10 0/0:20.1896:7:7:266:0:0:0,-2.10721,-10 0/0:26.2102:9:9:330:0:0:0,-2.70927,-10 0/0:95.4449:32:32:1154:0:0:0,-9.63296,-10 0/0:26.2102:9:9:340:0:0:0,-2.70927,-10 0/0:20.1896:7:7:264:0:0:0,-2.10721,-10 0/0:68.3544:23:23:814:0:0:0,-6.92369,-10 0/0:47.2823:16:16:582:0:0:0,-4.81648,-10 1/1:33.606:15:0:0:15:540:-10,-4.51545,0 0/0:99:35:35:1278:0:0:0,-10,-10 0/0:62.3338:21:21:765:0:0:0,-6.32163,-10 1/1:48.6575:20:0:0:20:727:-10,-6.0206,0 1/1:99:38:0:0:38:1316:-10,-10,0 0/1:99:38:25:901:13:490:-10,0,-10 1/1:33.606:15:0:0:15:521:-10,-4.51545,0 0/1:99:29:9:341:20:738:-10,0,-10 1/1:42.6369:18:0:0:18:652:-10,-5.41854,0 0/1:99:36:21:747:15:512:-10,0,-10 0/0:26.2102:9:9:320:0:0:0,-2.70927,-10 0/1:0.133186:4:0:0:4:152:-10,-1.20412,0 0/1:99:42:14:514:28:1036:-10,0,-10 0/0:32.2308:11:11:417:0:0:0,-3.31133,-10 0/1:99:16:9:332:7:265:-10,0,-10 0/0:20.1896:7:7:230:0:0:0,-2.10721,-10 0/0:38.2514:13:13:473:0:0:0,-3.91339,-10 0/0:29.2205:10:10:380:0:0:0,-3.0103,-10 0/0:65.3441:22:22:791:0:0:0,-6.62266,-10 0/0:65.3441:22:22:814:0:0:0,-6.62266,-10 0/1:99:47:14:515:33:1208:-10,0,-10 0/1:99:27:12:437:15:545:-10,0,-10 0/0:38.2514:13:13:459:0:0:0,-3.91339,-10 0/0:99:36:36:1301:0:0:0,-10,-10 0/0:56.3132:19:19:717:0:0:0,-5.71957,-10 0/0:35.2411:12:12:449:0:0:0,-3.61236,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:26.2102:9:9:337:0:0:0,-2.70927,-10 0/0:38.2514:13:13:489:0:0:0,-3.91339,-10 0/0:99:37:37:1348:0:0:0,-10,-10 0/0:68.3544:23:23:813:0:0:0,-6.92369,-10 0/0:17.1793:6:6:221:0:0:0,-1.80618,-10 0/0:80.3957:27:27:975:0:0:0,-8.12781,-10 0/0:41.2617:14:14:526:0:0:0,-4.21442,-10 0/0:29.2205:10:10:375:0:0:0,-3.0103,-10 0/0:38.2514:13:13:493:0:0:0,-3.91339,-10 0/0:17.1793:6:6:204:0:0:0,-1.80618,-10 0/0:38.2514:13:13:450:0:0:0,-3.91339,-10 0/0:99:40:40:1486:0:0:0,-10,-10 0/0:89.4268:30:30:1102:0:0:0,-9.0309,-10 0/0:74.375:25:25:897:0:0:0,-7.52575,-10 0/0:62.3338:21:21:747:0:0:0,-6.32163,-10 0/0:74.375:25:25:922:0:0:0,-7.52575,-10 0/0:8.14844:3:3:113:0:0:0,-0.90309,-10 1/1:81.7707:31:0:0:31:1163:-10,-9.33193,0 0/0:38.2514:13:13:448:0:0:0,-3.91339,-10 0/0:17.1793:6:6:227:0:0:0,-1.80618,-10 0/0:35.2411:12:12:391:0:0:0,-3.61236,-10 0/0:50.2926:17:17:617:0:0:0,-5.11751,-10 0/0:50.2926:17:17:600:0:0:0,-5.11751,-10 scaffold_285 245847 . A G 2309.48 . AB=0.463235;ABP=4.60697;AC=7;AF=0.0380435;AN=184;AO=90;CIGAR=1X;DP=1781;DPB=1781;DPRA=1.46723;EPP=5.42305;EPPR=10.2336;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9545;NS=92;NUMALT=1;ODDS=3.6097;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3253;QR=62247;RO=1691;RPP=198.443;RPPR=3452.61;RUN=1;SAF=40;SAP=5.42305;SAR=50;SRF=857;SRP=3.68961;SRR=834;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:67.275:20:20:750:0:0:0,-6.0206,-10 0/0:31.1514:8:8:303:0:0:0,-2.40824,-10 0/0:82.3264:25:25:934:0:0:0,-7.52575,-10 0/0:52.2235:15:15:542:0:0:0,-4.51545,-10 0/0:43.1926:12:12:420:0:0:0,-3.61236,-10 0/0:43.1926:12:12:444:0:0:0,-3.61236,-10 0/0:99:40:40:1437:0:0:0,-10,-10 0/0:91.3567:28:28:1009:0:0:0,-8.42884,-10 0/0:34.1617:9:9:332:0:0:0,-2.70927,-10 0/0:16.0999:3:3:113:0:0:0,-0.90309,-10 0/0:34.1617:9:9:318:0:0:0,-2.70927,-10 0/0:25.1308:6:6:224:0:0:0,-1.80618,-10 0/0:97.3753:30:30:1123:0:0:0,-9.0309,-10 0/0:99:37:37:1402:0:0:0,-10,-10 0/0:79.3162:24:24:911:0:0:0,-7.22472,-10 0/0:58.2441:17:17:638:0:0:0,-5.11751,-10 0/0:76.3059:23:23:845:0:0:0,-6.92369,-10 0/0:34.1617:9:9:319:0:0:0,-2.70927,-10 0/0:67.275:20:20:724:0:0:0,-6.0206,-10 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:55.2338:16:16:585:0:0:0,-4.81648,-10 0/0:82.3264:25:25:916:0:0:0,-7.52575,-10 0/0:28.1411:7:7:262:0:0:0,-2.10721,-10 0/0:76.3059:23:23:868:0:0:0,-6.92369,-10 0/0:64.2647:19:19:697:0:0:0,-5.71957,-10 0/0:97.3753:30:30:1124:0:0:0,-9.0309,-10 0/0:61.2544:18:18:675:0:0:0,-5.41854,-10 0/0:40.1823:11:11:398:0:0:0,-3.31133,-10 1/1:41.9489:26:0:0:26:930:-10,-7.82678,0 0/0:99:37:37:1312:0:0:0,-10,-10 0/1:0.0363553:5:0:0:5:189:-10,-1.50515,0 0/0:37.172:10:10:376:0:0:0,-3.0103,-10 0/0:73.2956:22:22:789:0:0:0,-6.62266,-10 0/0:43.1926:12:12:455:0:0:0,-3.61236,-10 0/0:73.2956:22:22:819:0:0:0,-6.62266,-10 0/0:28.1411:7:7:261:0:0:0,-2.10721,-10 0/0:34.1617:9:9:332:0:0:0,-2.70927,-10 0/0:99:32:32:1156:0:0:0,-9.63296,-10 0/0:34.1617:9:9:342:0:0:0,-2.70927,-10 0/0:28.1411:7:7:266:0:0:0,-2.10721,-10 0/1:99:23:12:431:11:404:-10,0,-10 0/0:55.2338:16:16:598:0:0:0,-4.81648,-10 0/0:52.2235:15:15:557:0:0:0,-4.51545,-10 0/0:99:35:35:1319:0:0:0,-10,-10 0/0:70.2853:21:21:777:0:0:0,-6.32163,-10 0/0:67.275:20:20:754:0:0:0,-6.0206,-10 0/0:99:38:38:1340:0:0:0,-10,-10 0/1:99:38:13:487:25:914:-10,0,-10 0/0:52.2235:15:15:526:0:0:0,-4.51545,-10 0/1:99:29:20:725:9:340:-10,0,-10 0/0:61.2544:18:18:666:0:0:0,-5.41854,-10 0/0:99:35:35:1316:0:0:0,-10,-10 0/0:34.1617:9:9:322:0:0:0,-2.70927,-10 0/0:19.1102:4:4:152:0:0:0,-1.20412,-10 0/1:99:41:28:985:13:438:-10,0,-10 0/0:40.1823:11:11:418:0:0:0,-3.31133,-10 0/0:55.2338:16:16:585:0:0:0,-4.81648,-10 0/0:28.1411:7:7:245:0:0:0,-2.10721,-10 0/0:46.2029:13:13:483:0:0:0,-3.91339,-10 0/0:37.172:10:10:379:0:0:0,-3.0103,-10 0/0:73.2956:22:22:801:0:0:0,-6.62266,-10 0/0:73.2956:22:22:828:0:0:0,-6.62266,-10 0/0:99:47:47:1714:0:0:0,-10,-10 0/0:85.337:26:26:939:0:0:0,-7.82678,-10 0/0:46.2029:13:13:466:0:0:0,-3.91339,-10 0/0:99:36:36:1329:0:0:0,-10,-10 0/0:64.2647:19:19:687:0:0:0,-5.71957,-10 0/0:43.1926:12:12:420:0:0:0,-3.61236,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:34.1617:9:9:342:0:0:0,-2.70927,-10 0/0:46.2029:13:13:494:0:0:0,-3.91339,-10 0/0:99:37:37:1386:0:0:0,-10,-10 0/0:76.3059:23:23:811:0:0:0,-6.92369,-10 0/0:25.1308:6:6:224:0:0:0,-1.80618,-10 0/0:88.3474:27:27:1003:0:0:0,-8.12781,-10 0/0:49.2132:14:14:514:0:0:0,-4.21442,-10 0/0:37.172:10:10:375:0:0:0,-3.0103,-10 0/0:46.2029:13:13:491:0:0:0,-3.91339,-10 0/0:25.1308:6:6:217:0:0:0,-1.80618,-10 0/0:46.2029:13:13:480:0:0:0,-3.91339,-10 0/0:99:39:39:1463:0:0:0,-10,-10 0/0:47.2471:30:29:1031:1:38:0,-3.75378,-10 0/0:82.3264:25:25:906:0:0:0,-7.52575,-10 0/0:70.2853:21:21:772:0:0:0,-6.32163,-10 0/0:79.3162:24:24:873:0:0:0,-7.22472,-10 0/0:16.0999:3:3:114:0:0:0,-0.90309,-10 0/0:99:31:31:1166:0:0:0,-9.33193,-10 0/0:46.2029:13:13:482:0:0:0,-3.91339,-10 0/0:25.1308:6:6:225:0:0:0,-1.80618,-10 0/0:43.1926:12:12:436:0:0:0,-3.61236,-10 0/0:58.2441:17:17:634:0:0:0,-5.11751,-10 0/0:58.2441:17:17:636:0:0:0,-5.11751,-10 scaffold_285 250673 . G A 12589.5 . AB=0.472081;ABP=7.01154;AC=30;AF=0.163043;AN=184;AO=445;CIGAR=1X;DP=2892;DPB=2892;DPRA=1.13278;EPP=7.11414;EPPR=3.0103;GTI=2;LEN=1;MEANALT=1.04167;MQM=59.9865;MQMR=60;NS=92;NUMALT=1;ODDS=0.0212804;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=16243;QR=88583;RO=2446;RPP=934.884;RPPR=5227.93;RUN=1;SAF=239;SAP=8.32431;SAR=206;SRF=1223;SRP=3.0103;SRR=1223;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:77.2466:20:20:749:0:0:0,-6.0206,-10 0/0:56.1746:13:13:470:0:0:0,-3.91339,-10 0/1:99:34:13:486:21:786:-10,0,-10 0/0:99:30:30:1078:0:0:0,-9.0309,-10 0/0:71.2261:18:18:621:0:0:0,-5.41854,-10 0/0:65.2055:16:16:583:0:0:0,-4.81648,-10 0/0:99:64:64:2322:0:0:0,-10,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/1:0.102953:7:0:0:7:265:-10,-2.10721,0 1/1:12.1544:11:0:0:11:399:-10,-3.31133,0 0/0:65.2055:16:16:598:0:0:0,-4.81648,-10 0/1:99:72:37:1377:34:1231:-10,0,-10 1/1:99:47:0:0:47:1689:-10,-10,0 0/1:99:31:14:511:17:641:-10,0,-10 0/0:99:35:35:1303:0:0:0,-10,-10 0/0:99:37:37:1324:0:0:0,-10,-10 0/0:77.2466:20:20:707:0:0:0,-6.0206,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:99:54:54:1958:0:0:0,-10,-10 0/0:65.2055:16:16:596:0:0:0,-4.81648,-10 0/0:99:49:49:1802:0:0:0,-10,-10 1/1:21.1853:14:0:0:14:470:-10,-4.21442,0 0/1:99:24:16:563:8:301:-10,0,-10 0/0:99:28:28:1006:0:0:0,-8.42884,-10 0/0:99:49:49:1772:0:0:0,-10,-10 0/0:98.3213:27:27:1009:0:0:0,-8.12781,-10 0/0:89.2882:24:24:901:0:0:0,-7.22472,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:99:60:60:2132:0:0:0,-10,-10 0/1:9.85058:11:10:361:1:38:-1.53006,0,-10 0/0:44.1334:9:9:341:0:0:0,-2.70927,-10 0/0:99:36:36:1261:0:0:0,-10,-10 0/0:59.1849:14:14:517:0:0:0,-4.21442,-10 0/0:74.2363:19:19:648:0:0:0,-5.71957,-10 0/0:47.1437:10:10:363:0:0:0,-3.0103,-10 0/0:50.154:11:11:349:0:0:0,-3.31133,-10 0/0:99:50:50:1766:0:0:0,-10,-10 0/0:99:30:30:1106:0:0:0,-9.0309,-10 0/0:74.2363:19:19:680:0:0:0,-5.71957,-10 0/0:99:55:55:1997:0:0:0,-10,-10 0/0:95.3097:26:26:916:0:0:0,-7.82678,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/0:99:44:44:1615:0:0:0,-10,-10 0/0:99:29:29:1090:0:0:0,-8.72987,-10 0/1:99:32:15:553:17:592:-10,0,-10 0/1:99:70:37:1345:33:1209:-10,0,-10 0/1:99:61:32:1156:29:1072:-10,0,-10 1/1:54.2986:25:0:0:25:924:-10,-7.52575,0 0/1:99:63:37:1319:26:917:-10,0,-10 1/1:54.2986:25:0:0:25:906:-10,-7.52575,0 0/1:99:71:45:1554:26:985:-10,0,-10 0/0:74.2363:19:19:675:0:0:0,-5.71957,-10 1/1:6.13384:9:0:0:9:342:-10,-2.70927,0 0/0:99:56:56:2058:0:0:0,-10,-10 0/0:68.2158:17:17:614:0:0:0,-5.11751,-10 0/1:99:29:17:599:12:434:-10,0,-10 1/1:6.13384:9:0:0:9:341:-10,-2.70927,0 0/0:99:29:29:1077:0:0:0,-8.72987,-10 0/0:71.2261:18:18:674:0:0:0,-5.41854,-10 0/0:99:57:56:1982:1:15:0,-10,-10 0/0:92.2954:25:25:901:0:0:0,-7.52575,-10 0/1:99:75:30:1122:45:1657:-10,0,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:0.308091:14:13:470:1:38:-0.731708,0,-10 0/0:99:45:45:1600:0:0:0,-10,-10 0/0:99:35:35:1309:0:0:0,-10,-10 0/0:74.2363:19:19:679:0:0:0,-5.71957,-10 0/0:99:50:50:1867:0:0:0,-10,-10 0/0:44.1334:9:9:340:0:0:0,-2.70927,-10 0/0:99:37:37:1302:0:0:0,-10,-10 0/0:99:43:43:1511:0:0:0,-10,-10 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:99:29:29:1022:0:0:0,-8.72987,-10 0/0:99:40:40:1497:0:0:0,-10,-10 0/0:95.3097:26:26:885:0:0:0,-7.82678,-10 0/0:99:33:33:1251:0:0:0,-9.93399,-10 0/0:99:33:33:1187:0:0:0,-9.93399,-10 0/0:68.2158:17:17:591:0:0:0,-5.11751,-10 0/0:53.1643:12:12:443:0:0:0,-3.61236,-10 0/0:99:58:58:2081:0:0:0,-10,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:99:38:38:1326:0:0:0,-10,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:99:34:34:1226:0:0:0,-10,-10 0/0:47.1437:10:10:340:0:0:0,-3.0103,-10 1/1:51.2883:24:0:0:24:877:-10,-7.22472,0 0/0:86.2777:23:23:849:0:0:0,-6.92369,-10 0/1:83.136:11:8:298:3:114:-9.54615,0,-10 0/0:99:30:30:1044:0:0:0,-9.0309,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 scaffold_285 272086 . G A 1704.32 . AB=0.573913;ABP=8.4673;AC=6;AF=0.0326087;AN=184;AO=69;CIGAR=1X;DP=1272;DPB=1272;DPRA=1.29856;EPP=152.842;EPPR=2606.61;GTI=2;LEN=1;MEANALT=1;MQM=59.8841;MQMR=59.9917;NS=92;NUMALT=1;ODDS=1.4428;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2501;QR=43888;RO=1203;RPP=8.32883;RPPR=6.99765;RUN=1;SAF=28;SAP=8.32883;SAR=41;SRF=624;SRP=6.66552;SRR=579;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.3237:14:14:509:0:0:0,-4.21442,-10 0/0:30.2619:8:8:279:0:0:0,-2.40824,-10 0/0:60.3649:18:18:683:0:0:0,-5.41854,-10 0/0:27.2516:7:7:244:0:0:0,-2.10721,-10 0/0:57.3546:17:17:630:0:0:0,-5.11751,-10 0/0:27.2516:7:7:266:0:0:0,-2.10721,-10 0/0:93.4779:29:29:1086:0:0:0,-8.72987,-10 0/0:45.3134:13:13:462:0:0:0,-3.91339,-10 0/0:30.2619:8:8:304:0:0:0,-2.40824,-10 0/0:18.2207:4:4:152:0:0:0,-1.20412,-10 0/0:24.2413:6:6:227:0:0:0,-1.80618,-10 0/0:15.2104:3:3:113:0:0:0,-0.90309,-10 0/0:69.3958:21:21:764:0:0:0,-6.32163,-10 0/0:66.3855:20:20:750:0:0:0,-6.0206,-10 0/0:42.3031:12:12:431:0:0:0,-3.61236,-10 0/0:60.3649:18:18:653:0:0:0,-5.41854,-10 0/0:66.3855:20:20:735:0:0:0,-6.0206,-10 0/0:33.2722:9:9:334:0:0:0,-2.70927,-10 0/0:33.2722:9:9:298:0:0:0,-2.70927,-10 0/0:84.4473:26:26:972:0:0:0,-7.82678,-10 0/0:12.2015:8:7:244:1:15:0,-0.00514998,-10 0/0:78.4267:24:24:890:0:0:0,-7.22472,-10 0/0:36.2825:10:10:380:0:0:0,-3.0103,-10 0/0:48.3237:14:14:495:0:0:0,-4.21442,-10 0/0:75.4164:23:23:772:0:0:0,-6.92369,-10 0/0:63.3752:19:19:719:0:0:0,-5.71957,-10 0/0:30.2619:8:8:290:0:0:0,-2.40824,-10 0/0:42.3031:12:12:451:0:0:0,-3.61236,-10 0/1:0.222221:10:0:0:10:366:-10,-3.0103,0 0/0:87.4575:27:27:952:0:0:0,-8.12781,-10 0/1:0.0544984:8:0:0:8:295:-10,-2.40824,0 0/0:30.2619:8:8:304:0:0:0,-2.40824,-10 0/0:75.4164:23:23:851:0:0:0,-6.92369,-10 0/0:24.2413:6:6:227:0:0:0,-1.80618,-10 0/0:42.3031:12:12:433:0:0:0,-3.61236,-10 0/0:27.2516:7:7:243:0:0:0,-2.10721,-10 0/0:51.334:15:15:529:0:0:0,-4.51545,-10 0/0:72.4061:22:22:802:0:0:0,-6.62266,-10 0/0:48.3237:14:14:500:0:0:0,-4.21442,-10 0/0:24.2413:6:6:223:0:0:0,-1.80618,-10 0/1:99:25:9:342:16:594:-10,0,-10 0/0:57.3546:17:17:618:0:0:0,-5.11751,-10 0/0:36.2825:10:10:365:0:0:0,-3.0103,-10 0/0:54.3443:16:16:583:0:0:0,-4.81648,-10 0/0:54.3443:16:16:563:0:0:0,-4.81648,-10 0/0:45.3134:13:13:487:0:0:0,-3.91339,-10 0/0:75.4164:23:23:821:0:0:0,-6.92369,-10 0/1:99:16:9:328:7:266:-10,0,-10 0/0:27.2516:7:7:253:0:0:0,-2.10721,-10 0/1:99:29:16:605:13:480:-10,0,-10 0/0:21.231:5:5:180:0:0:0,-1.50515,-10 0/0:57.3546:17:17:615:0:0:0,-5.11751,-10 0/0:54.3443:16:16:574:0:0:0,-4.81648,-10 0/0:15.2104:3:3:105:0:0:0,-0.90309,-9.8 0/1:99:27:15:560:12:433:-10,0,-10 0/0:48.3237:14:14:524:0:0:0,-4.21442,-10 0/0:42.3031:12:12:449:0:0:0,-3.61236,-10 0/0:9.18983:1:1:38:0:0:0,-0.30103,-3.8 0/0:57.3546:17:17:613:0:0:0,-5.11751,-10 0/0:20.3838:12:11:380:1:14:0,-1.13318,-10 0/0:93.4779:29:29:1077:0:0:0,-8.72987,-10 0/0:45.3134:13:13:487:0:0:0,-3.91339,-10 0/0:69.3958:21:21:771:0:0:0,-6.32163,-10 0/0:36.2825:10:10:367:0:0:0,-3.0103,-10 0/0:21.231:5:5:189:0:0:0,-1.50515,-10 0/0:87.4575:27:27:974:0:0:0,-8.12781,-10 0/0:42.3031:12:12:454:0:0:0,-3.61236,-10 0/0:15.2104:3:3:114:0:0:0,-0.90309,-10 0/0:75.4164:23:23:866:0:0:0,-6.92369,-10 0/0:42.3031:12:12:447:0:0:0,-3.61236,-10 0/0:27.2516:7:7:249:0:0:0,-2.10721,-10 0/0:39.2928:11:11:407:0:0:0,-3.31133,-10 0/0:42.3031:12:12:453:0:0:0,-3.61236,-10 0/0:36.2825:10:10:379:0:0:0,-3.0103,-10 0/0:51.334:15:15:560:0:0:0,-4.51545,-10 0/0:36.2825:10:10:354:0:0:0,-3.0103,-10 0/0:36.2825:10:10:357:0:0:0,-3.0103,-10 0/0:33.2722:9:9:317:0:0:0,-2.70927,-10 0/0:18.2207:4:4:152:0:0:0,-1.20412,-10 0/0:24.2413:6:6:200:0:0:0,-1.80618,-10 0/0:87.4575:27:27:954:0:0:0,-8.12781,-10 0/0:63.3752:19:19:674:0:0:0,-5.71957,-10 0/0:26.9524:22:21:762:1:38:0,-1.48024,-10 0/0:78.4267:24:24:848:0:0:0,-7.22472,-10 0/0:60.3649:18:18:670:0:0:0,-5.41854,-10 0/0:21.231:5:5:167:0:0:0,-1.50515,-10 0/0:45.3134:13:13:492:0:0:0,-3.91339,-10 0/0:33.2722:9:9:317:0:0:0,-2.70927,-10 0/0:12.2001:2:2:53:0:0:0,-0.60206,-5.035 0/0:48.3237:14:14:530:0:0:0,-4.21442,-10 0/0:48.3237:14:14:515:0:0:0,-4.21442,-10 0/0:51.334:15:15:532:0:0:0,-4.51545,-10 scaffold_285 272091 . T C 1303.77 . AB=0.58427;ABP=8.49998;AC=7;AF=0.0380435;AN=184;AO=53;CIGAR=1X;DP=1272;DPB=1272;DPRA=0.964378;EPP=3.05127;EPPR=61.3693;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9737;NS=92;NUMALT=1;ODDS=1.90617;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1929;QR=44831;RO=1219;RPP=93.5156;RPPR=2031.06;RUN=1;SAF=24;SAP=4.03458;SAR=29;SRF=624;SRP=4.50842;SRR=595;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.0569:14:14:484:0:0:0,-4.21442,-10 0/0:41.9951:8:8:284:0:0:0,-2.40824,-10 0/0:23.7686:18:17:642:1:38:0,-0.363267,-10 0/0:38.9848:7:7:244:0:0:0,-2.10721,-10 0/0:69.0878:17:17:617:0:0:0,-5.11751,-10 0/0:38.9848:7:7:261:0:0:0,-2.10721,-10 0/1:99:29:15:523:14:529:-10,0,-10 0/0:57.0466:13:13:465:0:0:0,-3.91339,-10 0/0:41.9951:8:8:304:0:0:0,-2.40824,-10 0/0:29.9539:4:4:148:0:0:0,-1.20412,-10 0/0:35.9745:6:6:223:0:0:0,-1.80618,-10 0/0:26.9436:3:3:111:0:0:0,-0.90309,-10 0/0:81.129:21:21:767:0:0:0,-6.32163,-10 0/0:78.1187:20:20:735:0:0:0,-6.0206,-10 0/0:54.0363:12:12:429:0:0:0,-3.61236,-10 0/0:72.0981:18:18:676:0:0:0,-5.41854,-10 0/0:78.1187:20:20:754:0:0:0,-6.0206,-10 0/0:45.0054:9:9:301:0:0:0,-2.70927,-10 0/0:45.0054:9:9:315:0:0:0,-2.70927,-10 0/0:96.179:26:26:962:0:0:0,-7.82678,-10 0/1:99:8:3:114:5:161:-10,0,-9.97995 0/0:90.1595:24:24:890:0:0:0,-7.22472,-10 0/0:48.0157:10:10:378:0:0:0,-3.0103,-10 0/0:57.0466:13:13:479:0:0:0,-3.91339,-10 0/0:87.1494:23:23:837:0:0:0,-6.92369,-10 0/0:75.1084:19:19:717:0:0:0,-5.71957,-10 0/0:38.9848:7:7:264:0:0:0,-2.10721,-10 0/0:54.0363:12:12:446:0:0:0,-3.61236,-10 0/0:48.0157:10:10:351:0:0:0,-3.0103,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:41.9951:8:8:302:0:0:0,-2.40824,-10 0/0:41.9951:8:8:304:0:0:0,-2.40824,-10 0/0:87.1494:23:23:840:0:0:0,-6.92369,-10 0/0:35.9745:6:6:224:0:0:0,-1.80618,-10 0/0:54.0363:12:12:430:0:0:0,-3.61236,-10 0/1:0.0021425:7:0:0:7:237:-10,-2.10721,0 0/0:63.0672:15:15:536:0:0:0,-4.51545,-10 0/0:84.1392:22:22:828:0:0:0,-6.62266,-10 0/0:60.0569:14:14:522:0:0:0,-4.21442,-10 0/0:35.9745:6:6:228:0:0:0,-1.80618,-10 0/0:93.1694:25:25:922:0:0:0,-7.52575,-10 0/0:69.0878:17:17:614:0:0:0,-5.11751,-10 0/0:48.0157:10:10:358:0:0:0,-3.0103,-10 0/0:66.0775:16:16:585:0:0:0,-4.81648,-10 0/0:66.0775:16:16:601:0:0:0,-4.81648,-10 0/0:57.0466:13:13:479:0:0:0,-3.91339,-10 0/0:87.1494:23:23:850:0:0:0,-6.92369,-10 0/0:66.0775:16:16:603:0:0:0,-4.81648,-10 0/0:38.9848:7:7:243:0:0:0,-2.10721,-10 0/0:99:29:29:1097:0:0:0,-8.72987,-10 0/0:35.9745:6:6:200:0:0:0,-1.80618,-10 0/0:78.1187:20:20:719:0:0:0,-6.0206,-10 0/0:63.0672:15:15:566:0:0:0,-4.51545,-10 0/0:26.9436:3:3:114:0:0:0,-0.90309,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:60.0569:14:14:529:0:0:0,-4.21442,-10 0/0:54.0363:12:12:454:0:0:0,-3.61236,-10 0/0:20.923:1:1:38:0:0:0,-0.30103,-3.8 0/0:69.0878:17:17:641:0:0:0,-5.11751,-10 0/0:54.0363:12:12:433:0:0:0,-3.61236,-10 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:57.0466:13:13:493:0:0:0,-3.91339,-10 0/0:81.129:21:21:774:0:0:0,-6.32163,-10 0/0:48.0157:10:10:377:0:0:0,-3.0103,-10 0/0:32.9642:5:5:172:0:0:0,-1.50515,-10 0/0:96.179:26:26:920:0:0:0,-7.82678,-10 0/0:54.0363:12:12:421:0:0:0,-3.61236,-10 0/0:26.9436:3:3:114:0:0:0,-0.90309,-10 0/0:87.1494:23:23:874:0:0:0,-6.92369,-10 0/0:54.0363:12:12:420:0:0:0,-3.61236,-10 0/0:38.9848:7:7:253:0:0:0,-2.10721,-10 0/0:51.026:11:11:418:0:0:0,-3.31133,-10 0/0:54.0363:12:12:456:0:0:0,-3.61236,-10 0/0:48.0157:10:10:375:0:0:0,-3.0103,-10 0/0:63.0672:15:15:548:0:0:0,-4.51545,-10 0/0:48.0157:10:10:351:0:0:0,-3.0103,-10 0/0:48.0157:10:10:357:0:0:0,-3.0103,-10 0/0:45.0054:9:9:339:0:0:0,-2.70927,-10 0/0:29.9539:4:4:152:0:0:0,-1.20412,-10 0/0:35.9745:6:6:205:0:0:0,-1.80618,-10 0/0:99:27:27:1012:0:0:0,-8.12781,-10 0/0:75.1084:19:19:690:0:0:0,-5.71957,-10 0/0:84.1392:22:22:807:0:0:0,-6.62266,-10 0/0:90.1595:24:24:893:0:0:0,-7.22472,-10 0/0:72.0981:18:18:653:0:0:0,-5.41854,-10 0/0:32.9642:5:5:168:0:0:0,-1.50515,-10 0/0:57.0466:13:13:490:0:0:0,-3.91339,-10 0/0:45.0054:9:9:324:0:0:0,-2.70927,-10 0/1:6.6937e-05:2:0:0:2:65:-6.175,-0.60206,0 0/1:99:14:9:342:5:186:-10,0,-10 0/1:99:14:10:377:4:152:-10,0,-10 0/1:0.586182:15:0:0:15:561:-10,-4.51545,0 scaffold_285 279210 . G A 173.742 . AB=0.470588;ABP=3.13803;AC=1;AF=0.00549451;AN=182;AO=9;CIGAR=1X;DP=1355;DPB=1355;DPRA=1.49352;EPP=5.18177;EPPR=6.73837;GTI=0;LEN=1;MEANALT=1;MQM=55.8889;MQMR=59.9911;NS=91;NUMALT=1;ODDS=9.17322;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=317;QR=48303;RO=1342;RPP=14.8328;RPPR=2891.13;RUN=1;SAF=2;SAP=9.04217;SAR=7;SRF=698;SRP=7.72864;SRR=644;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.9533:13:13:493:0:0:0,-3.91339,-10 0/0:60.9121:9:9:313:0:0:0,-2.70927,-10 0/0:69.943:12:12:439:0:0:0,-3.61236,-10 0/0:63.9224:10:10:380:0:0:0,-3.0103,-10 0/0:72.9533:14:13:438:0:0:0,-3.91339,-10 0/0:48.8709:5:5:180:0:0:0,-1.50515,-10 0/0:99:25:25:898:0:0:0,-7.52575,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:51.8812:6:6:213:0:0:0,-1.80618,-10 0/0:45.8606:4:4:124:0:0:0,-1.20412,-10 0/0:57.9018:8:8:295:0:0:0,-2.40824,-10 0/0:60.9121:10:9:338:0:0:0,-2.70927,-10 0/0:97.0347:21:21:765:0:0:0,-6.32163,-10 0/0:77.236:27:26:969:1:15:0,-5.19645,-10 0/0:99:23:23:856:0:0:0,-6.92369,-10 0/0:94.0249:20:20:731:0:0:0,-6.0206,-10 0/0:99:25:25:882:0:0:0,-7.52575,-10 0/0:39.84:2:2:67:0:0:0,-0.60206,-6.365 0/0:63.9224:10:10:373:0:0:0,-3.0103,-10 0/0:63.9224:10:10:374:0:0:0,-3.0103,-10 0/0:81.9842:16:16:576:0:0:0,-4.81648,-10 0/0:99:29:29:1031:0:0:0,-8.72987,-10 0/0:57.9018:8:8:304:0:0:0,-2.40824,-10 0/0:66.9327:11:11:414:0:0:0,-3.31133,-10 0/0:88.0047:18:18:653:0:0:0,-5.41854,-10 0/0:75.9636:14:14:509:0:0:0,-4.21442,-10 0/0:78.9739:15:15:568:0:0:0,-4.51545,-10 0/0:63.9224:10:10:350:0:0:0,-3.0103,-10 0/0:81.9842:16:16:605:0:0:0,-4.81648,-10 0/0:99:33:33:1179:0:0:0,-9.93399,-10 0/0:45.8606:4:4:128:0:0:0,-1.20412,-10 0/0:66.9327:11:11:416:0:0:0,-3.31133,-10 0/0:88.0047:18:18:632:0:0:0,-5.41854,-10 .:.:.:.:.:.:.:. 0/0:84.9945:17:17:601:0:0:0,-5.11751,-10 0/0:45.8606:4:4:121:0:0:0,-1.20412,-10 0/0:66.9327:11:11:406:0:0:0,-3.31133,-10 0/0:78.9739:16:15:522:0:0:0,-4.51545,-10 0/0:72.9533:13:13:470:0:0:0,-3.91339,-10 0/0:75.9636:14:14:501:0:0:0,-4.21442,-10 0/0:99:22:22:776:0:0:0,-6.62266,-10 0/0:54.8915:7:7:263:0:0:0,-2.10721,-10 0/0:72.9533:13:13:483:0:0:0,-3.91339,-10 0/0:99:27:27:974:0:0:0,-8.12781,-10 0/0:81.9842:16:16:532:0:0:0,-4.81648,-10 0/0:66.9327:11:11:411:0:0:0,-3.31133,-10 0/0:99:33:33:1128:0:0:0,-9.93399,-10 0/0:99:23:23:871:0:0:0,-6.92369,-10 0/0:66.9327:11:11:397:0:0:0,-3.31133,-10 0/0:99:24:24:782:0:0:0,-7.22472,-10 0/0:69.943:12:12:426:0:0:0,-3.61236,-10 0/0:97.0347:21:21:738:0:0:0,-6.32163,-10 0/0:66.9327:11:11:418:0:0:0,-3.31133,-10 0/0:66.9327:11:11:387:0:0:0,-3.31133,-10 0/0:99:22:22:800:0:0:0,-6.62266,-10 0/0:69.943:12:12:423:0:0:0,-3.61236,-10 0/0:81.9842:16:16:554:0:0:0,-4.81648,-10 0/0:54.8915:7:7:242:0:0:0,-2.10721,-10 0/0:91.0149:19:19:704:0:0:0,-5.71957,-10 0/0:45.8606:5:4:151:0:0:0,-1.20412,-10 0/0:99:22:22:804:0:0:0,-6.62266,-10 0/0:66.9327:11:11:378:0:0:0,-3.31133,-10 0/0:99:39:39:1322:0:0:0,-10,-10 0/1:99:17:9:329:8:302:-10,0,-10 0/0:63.9224:10:10:349:0:0:0,-3.0103,-10 0/0:69.943:12:12:442:0:0:0,-3.61236,-10 0/0:75.9636:14:14:470:0:0:0,-4.21442,-10 0/0:57.9018:8:8:292:0:0:0,-2.40824,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:69.943:12:12:416:0:0:0,-3.61236,-10 0/0:72.9533:13:13:459:0:0:0,-3.91339,-10 0/0:99:27:27:974:0:0:0,-8.12781,-10 0/0:88.0047:18:18:650:0:0:0,-5.41854,-10 0/0:54.8915:7:7:262:0:0:0,-2.10721,-10 0/0:99:23:23:815:0:0:0,-6.92369,-10 0/0:69.943:12:12:440:0:0:0,-3.61236,-10 0/0:78.9739:15:15:557:0:0:0,-4.51545,-10 0/0:69.943:12:12:432:0:0:0,-3.61236,-10 0/0:48.8709:5:5:190:0:0:0,-1.50515,-10 0/0:51.8812:6:6:204:0:0:0,-1.80618,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:97.0347:21:21:758:0:0:0,-6.32163,-10 0/0:66.9327:11:11:391:0:0:0,-3.31133,-10 0/0:66.9327:11:11:405:0:0:0,-3.31133,-10 0/0:99:23:23:855:0:0:0,-6.92369,-10 0/0:54.8915:7:7:255:0:0:0,-2.10721,-10 0/0:60.9121:9:9:333:0:0:0,-2.70927,-10 0/0:72.9533:13:13:491:0:0:0,-3.91339,-10 0/0:48.8709:5:5:166:0:0:0,-1.50515,-10 0/0:57.9018:8:8:295:0:0:0,-2.40824,-10 0/0:81.9842:16:16:587:0:0:0,-4.81648,-10 0/0:66.9327:11:11:399:0:0:0,-3.31133,-10 scaffold_285 279237 . G A 90.5514 . AB=0.375;ABP=5.18177;AC=1;AF=0.00549451;AN=182;AO=8;CIGAR=1X;DP=1357;DPB=1357;DPRA=1.16884;EPP=4.09604;EPPR=6.27476;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9911;NS=91;NUMALT=1;ODDS=10.3743;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=48694;RO=1347;RPP=20.3821;RPPR=2893.34;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=692;SRP=5.21724;SRR=655;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:79.0934:13:13:483:0:0:0,-3.91339,-10 0/0:67.0522:9:9:329:0:0:0,-2.70927,-10 0/0:76.0831:12:12:447:0:0:0,-3.61236,-10 0/0:67.0522:10:9:341:0:0:0,-2.70927,-10 0/0:82.1037:14:14:493:0:0:0,-4.21442,-10 0/0:55.011:5:5:190:0:0:0,-1.50515,-10 0/0:75.0712:25:24:889:1:29:0,-3.22781,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:58.0213:6:6:221:0:0:0,-1.80618,-10 0/0:52.0007:4:4:128:0:0:0,-1.20412,-10 0/0:64.0419:8:8:295:0:0:0,-2.40824,-10 0/0:70.0625:10:10:376:0:0:0,-3.0103,-10 0/0:99:21:21:767:0:0:0,-6.32163,-10 0/0:99:27:27:983:0:0:0,-8.12781,-10 0/0:99:23:23:835:0:0:0,-6.92369,-10 0/0:99:20:20:741:0:0:0,-6.0206,-10 0/0:99:26:26:934:0:0:0,-7.82678,-10 0/0:45.9801:2:2:59:0:0:0,-0.60206,-5.605 0/0:70.0625:10:10:366:0:0:0,-3.0103,-10 0/0:70.0625:10:10:380:0:0:0,-3.0103,-10 0/1:90.5511:16:10:338:6:198:-10,0,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:64.0419:8:8:302:0:0:0,-2.40824,-10 0/0:73.0728:11:11:414:0:0:0,-3.31133,-10 0/0:94.1444:18:18:673:0:0:0,-5.41854,-10 0/0:82.1037:14:14:495:0:0:0,-4.21442,-10 0/0:85.114:15:15:534:0:0:0,-4.51545,-10 0/0:70.0625:10:10:342:0:0:0,-3.0103,-10 0/0:88.1242:16:16:584:0:0:0,-4.81648,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/0:52.0007:4:4:150:0:0:0,-1.20412,-10 0/0:73.0728:11:11:416:0:0:0,-3.31133,-10 0/0:94.1444:18:18:657:0:0:0,-5.41854,-10 .:.:.:.:.:.:.:. 0/0:91.1343:17:17:610:0:0:0,-5.11751,-10 0/0:52.0007:4:4:125:0:0:0,-1.20412,-10 0/0:73.0728:11:11:380:0:0:0,-3.31133,-10 0/0:88.1242:16:16:592:0:0:0,-4.81648,-10 0/0:79.0934:13:13:494:0:0:0,-3.91339,-10 0/0:82.1037:14:14:520:0:0:0,-4.21442,-10 0/0:99:22:22:800:0:0:0,-6.62266,-10 0/0:61.0316:7:7:236:0:0:0,-2.10721,-10 0/0:79.0934:13:13:487:0:0:0,-3.91339,-10 0/0:99:27:27:940:0:0:0,-8.12781,-10 0/0:88.1242:16:16:574:0:0:0,-4.81648,-10 0/0:73.0728:11:11:418:0:0:0,-3.31133,-10 0/0:99:33:33:1124:0:0:0,-9.93399,-10 0/0:99:23:23:864:0:0:0,-6.92369,-10 0/0:45.0555:11:10:380:1:16:0,-0.669937,-10 0/0:99:24:24:827:0:0:0,-7.22472,-10 0/0:76.0831:12:12:438:0:0:0,-3.61236,-10 0/0:99:21:21:783:0:0:0,-6.32163,-10 0/0:73.0728:11:11:415:0:0:0,-3.31133,-10 0/0:73.0728:11:11:380:0:0:0,-3.31133,-10 0/0:99:23:23:741:0:0:0,-6.92369,-10 0/0:76.0831:12:12:412:0:0:0,-3.61236,-10 0/0:88.1242:16:16:587:0:0:0,-4.81648,-10 0/0:61.0316:7:7:237:0:0:0,-2.10721,-10 0/0:97.1541:19:19:703:0:0:0,-5.71957,-10 0/0:55.011:5:5:159:0:0:0,-1.50515,-10 0/0:99:22:22:816:0:0:0,-6.62266,-10 0/0:73.0728:11:11:387:0:0:0,-3.31133,-10 0/0:99:38:38:1340:0:0:0,-10,-10 0/0:91.1343:17:17:635:0:0:0,-5.11751,-10 0/0:70.0625:10:10:360:0:0:0,-3.0103,-10 0/0:76.0831:12:12:400:0:0:0,-3.61236,-10 0/0:85.114:15:15:533:0:0:0,-4.51545,-10 0/0:64.0419:8:8:295:0:0:0,-2.40824,-10 0/0:99:27:27:998:0:0:0,-8.12781,-10 0/0:76.0831:12:12:450:0:0:0,-3.61236,-10 0/0:79.0934:13:13:480:0:0:0,-3.91339,-10 0/0:99:27:27:955:0:0:0,-8.12781,-10 0/0:94.1444:18:18:598:0:0:0,-5.41854,-10 0/0:61.0316:7:7:260:0:0:0,-2.10721,-10 0/0:99:23:23:850:0:0:0,-6.92369,-10 0/0:76.0831:12:12:407:0:0:0,-3.61236,-10 0/0:85.114:15:15:520:0:0:0,-4.51545,-10 0/0:76.0831:12:12:444:0:0:0,-3.61236,-10 0/0:55.011:5:5:185:0:0:0,-1.50515,-10 0/0:58.0213:6:6:204:0:0:0,-1.80618,-10 0/0:99:27:27:948:0:0:0,-8.12781,-10 0/0:99:21:21:791:0:0:0,-6.32163,-10 0/0:73.0728:11:11:416:0:0:0,-3.31133,-10 0/0:73.0728:11:11:410:0:0:0,-3.31133,-10 0/0:99:23:23:851:0:0:0,-6.92369,-10 0/0:61.0316:7:7:244:0:0:0,-2.10721,-10 0/0:67.0522:9:9:337:0:0:0,-2.70927,-10 0/0:79.0934:13:13:487:0:0:0,-3.91339,-10 0/0:52.0007:5:4:152:0:0:0,-1.20412,-10 0/0:64.0419:8:8:282:0:0:0,-2.40824,-10 0/0:88.1242:16:16:596:0:0:0,-4.81648,-10 0/0:73.0728:11:11:416:0:0:0,-3.31133,-10 scaffold_285 544610 . G A 892.79 . AB=0.734694;ABP=26.4533;AC=2;AF=0.0108696;AN=184;AO=39;CIGAR=1X;DP=2129;DPB=2129;DPRA=0.75022;EPP=9.74743;EPPR=9.83032;GTI=1;LEN=1;MEANALT=1;MQM=58.4872;MQMR=59.9287;NS=92;NUMALT=1;ODDS=4.27211;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1342;QR=75231;RO=2089;RPP=87.6977;RPPR=4539.22;RUN=1;SAF=14;SAP=9.74743;SAR=25;SRF=1085;SRP=9.83032;SRR=1004;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:63.6121:18:18:630:0:0:0,-5.41854,-10 0/0:23.9433:12:11:391:1:16:0,-0.933179,-10 0/0:84.6843:25:25:892:0:0:0,-7.52575,-10 0/0:51.5709:14:14:509:0:0:0,-4.21442,-10 0/0:39.5297:10:10:379:0:0:0,-3.0103,-10 0/0:27.4885:6:6:199:0:0:0,-1.80618,-10 0/0:99:54:54:1904:0:0:0,-10,-10 0/0:99:35:35:1273:0:0:0,-10,-10 0/0:60.6018:17:17:599:0:0:0,-5.11751,-10 0/0:33.5091:8:8:267:0:0:0,-2.40824,-10 0/0:33.5091:8:8:279:0:0:0,-2.40824,-10 0/0:39.5297:10:10:331:0:0:0,-3.0103,-10 0/0:99:34:34:1261:0:0:0,-10,-10 0/0:99:49:49:1772:0:0:0,-10,-10 0/0:87.6941:26:26:934:0:0:0,-7.82678,-10 0/0:99:31:31:1099:0:0:0,-9.33193,-10 0/0:84.6843:25:25:897:0:0:0,-7.52575,-10 0/0:30.4988:7:7:265:0:0:0,-2.10721,-10 0/0:99:32:32:1157:0:0:0,-9.63296,-10 0/0:99:38:38:1392:0:0:0,-10,-10 0/0:81.6738:24:24:866:0:0:0,-7.22472,-10 0/0:99:51:51:1922:0:0:0,-10,-10 0/0:36.5194:9:9:331:0:0:0,-2.70927,-10 0/0:37.4821:17:16:531:1:16:0,-2.28706,-10 0/0:75.6533:22:22:811:0:0:0,-6.62266,-10 0/0:99:38:38:1400:0:0:0,-10,-10 0/0:78.6635:23:23:816:0:0:0,-6.92369,-10 0/1:0.0185267:12:0:0:12:408:-10,-3.61236,0 0/0:78.6635:23:23:813:0:0:0,-6.92369,-10 0/0:99:36:36:1268:0:0:0,-10,-10 0/0:24.4782:5:5:185:0:0:0,-1.50515,-10 0/0:36.5194:9:9:333:0:0:0,-2.70927,-10 0/0:75.6533:22:22:755:0:0:0,-6.62266,-10 0/0:57.5915:16:16:606:0:0:0,-4.81648,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:18.7145:10:9:314:1:16:0,-0.4103,-10 0/0:45.5503:12:12:414:0:0:0,-3.61236,-10 0/1:99:37:13:453:24:886:-10,0,-10 0/0:51.5709:14:14:497:0:0:0,-4.21442,-10 0/0:57.5915:16:16:545:0:0:0,-4.81648,-10 0/0:99:38:38:1372:0:0:0,-10,-10 0/0:93.7136:28:28:1021:0:0:0,-8.42884,-10 0/0:63.6121:18:18:647:0:0:0,-5.41854,-10 0/0:99:42:41:1480:0:0:0,-10,-10 0/0:84.6843:25:25:921:0:0:0,-7.52575,-10 0/0:45.5503:12:12:434:0:0:0,-3.61236,-10 0/0:99:59:59:2114:0:0:0,-10,-10 0/0:99:34:34:1234:0:0:0,-10,-10 0/0:54.5812:15:15:550:0:0:0,-4.51545,-10 0/0:99:45:45:1628:0:0:0,-10,-10 0/0:45.5503:12:12:430:0:0:0,-3.61236,-10 0/0:99:42:42:1459:0:0:0,-10,-10 0/0:57.5915:16:16:562:0:0:0,-4.81648,-10 0/0:27.4885:6:6:228:0:0:0,-1.80618,-10 0/0:96.7224:29:29:1040:0:0:0,-8.72987,-10 0/0:57.5915:16:16:552:0:0:0,-4.81648,-10 0/0:78.6635:23:23:839:0:0:0,-6.92369,-10 0/0:39.5297:10:10:360:0:0:0,-3.0103,-10 0/0:69.6327:20:20:753:0:0:0,-6.0206,-10 0/0:57.5915:16:16:566:0:0:0,-4.81648,-10 0/0:99:41:41:1463:0:0:0,-10,-10 0/0:90.704:27:27:994:0:0:0,-8.12781,-10 0/0:99:49:49:1781:0:0:0,-10,-10 0/0:93.7136:28:28:1029:0:0:0,-8.42884,-10 0/0:36.5194:9:9:317:0:0:0,-2.70927,-10 0/0:99:34:34:1215:0:0:0,-10,-10 0/0:81.6738:24:24:851:0:0:0,-7.22472,-10 0/0:42.54:11:11:392:0:0:0,-3.31133,-10 0/0:99:37:37:1335:0:0:0,-10,-10 0/0:39.5297:10:10:373:0:0:0,-3.0103,-10 0/0:93.7136:28:28:1008:0:0:0,-8.42884,-10 0/0:99:37:37:1325:0:0:0,-10,-10 0/0:87.6941:26:26:922:0:0:0,-7.82678,-10 0/0:99:31:31:1130:0:0:0,-9.33193,-10 0/0:84.6843:25:25:886:0:0:0,-7.52575,-10 0/0:48.5606:13:13:449:0:0:0,-3.91339,-10 0/0:78.6635:23:23:854:0:0:0,-6.92369,-10 0/0:36.5194:9:9:314:0:0:0,-2.70927,-10 0/0:24.4782:5:5:189:0:0:0,-1.50515,-10 0/0:39.5297:10:10:345:0:0:0,-3.0103,-10 0/0:96.7224:29:29:1043:0:0:0,-8.72987,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:99:35:35:1228:0:0:0,-10,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:99:31:31:1166:0:0:0,-9.33193,-10 0/0:39.5297:10:10:352:0:0:0,-3.0103,-10 0/0:51.5709:14:14:519:0:0:0,-4.21442,-10 0/0:63.6121:18:18:656:0:0:0,-5.41854,-10 0/0:36.5194:9:9:341:0:0:0,-2.70927,-10 0/0:60.6018:17:17:596:0:0:0,-5.11751,-10 0/0:51.5709:14:14:518:0:0:0,-4.21442,-10 0/0:69.6327:20:20:731:0:0:0,-6.0206,-10 scaffold_285 568687 . C T 229.515 . AB=0.52381;ABP=3.1137;AC=2;AF=0.0108696;AN=184;AO=13;CIGAR=1X;DP=1338;DPB=1338;DPRA=1.5488;EPP=31.2394;EPPR=2880.21;GTI=0;LEN=1;MEANALT=1;MQM=59.8462;MQMR=60;NS=92;NUMALT=1;ODDS=0.131712;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=470;QR=48715;RO=1325;RPP=11.1951;RPPR=5.50299;RUN=1;SAF=10;SAP=11.1951;SAR=3;SRF=643;SRP=5.50299;SRR=682;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:79.8859:14:14:516:0:0:0,-4.21442,-10 0/0:61.8241:8:8:302:0:0:0,-2.40824,-10 0/0:70.855:11:11:417:0:0:0,-3.31133,-10 0/0:79.8859:14:14:489:0:0:0,-4.21442,-10 0/0:73.8653:12:12:433:0:0:0,-3.61236,-10 0/0:49.7829:4:4:152:0:0:0,-1.20412,-10 0/0:99:35:34:1255:1:15:0,-7.49198,-10 0/0:99:21:21:780:0:0:0,-6.32163,-10 0/0:76.8756:13:13:485:0:0:0,-3.91339,-10 0/0:46.7726:3:3:114:0:0:0,-0.90309,-10 0/0:55.8035:6:6:228:0:0:0,-1.80618,-10 0/0:55.8035:6:6:227:0:0:0,-1.80618,-10 0/0:99:22:22:809:0:0:0,-6.62266,-10 0/0:91.9267:18:18:677:0:0:0,-5.41854,-10 0/0:99:30:30:1086:0:0:0,-9.0309,-10 0/0:99:28:28:1011:0:0:0,-8.42884,-10 0/0:79.8859:14:14:486:0:0:0,-4.21442,-10 0/0:58.8138:7:7:265:0:0:0,-2.10721,-10 0/0:79.8859:14:14:531:0:0:0,-4.21442,-10 0/0:75.4169:32:31:1090:1:38:0,-4.32781,-10 0/0:79.8859:14:14:510:0:0:0,-4.21442,-10 0/0:91.9267:18:18:674:0:0:0,-5.41854,-10 0/0:70.855:11:11:408:0:0:0,-3.31133,-10 0/0:70.855:11:11:408:0:0:0,-3.31133,-10 0/0:76.8756:13:13:482:0:0:0,-3.91339,-10 0/0:97.9462:20:20:727:0:0:0,-6.0206,-10 0/0:67.8447:10:10:372:0:0:0,-3.0103,-10 0/0:58.8138:7:7:239:0:0:0,-2.10721,-10 0/0:99:23:23:852:0:0:0,-6.92369,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:46.7726:3:3:111:0:0:0,-0.90309,-10 0/0:49.7829:4:4:152:0:0:0,-1.20412,-10 0/0:76.8756:13:13:486:0:0:0,-3.91339,-10 0/0:49.7829:4:4:143:0:0:0,-1.20412,-10 0/0:94.9367:19:19:716:0:0:0,-5.71957,-10 0/1:3.30621:3:2:76:1:38:-3.37403,0,-6.79403 0/0:58.8138:7:7:259:0:0:0,-2.10721,-10 0/0:82.8961:15:15:552:0:0:0,-4.51545,-10 0/0:70.855:11:11:403:0:0:0,-3.31133,-10 0/0:82.8961:15:15:543:0:0:0,-4.51545,-10 0/0:91.9267:18:18:657:0:0:0,-5.41854,-10 0/0:73.8653:12:12:455:0:0:0,-3.61236,-10 0/0:82.8961:15:15:554:0:0:0,-4.51545,-10 0/0:99:22:22:828:0:0:0,-6.62266,-10 0/0:88.9166:17:17:645:0:0:0,-5.11751,-10 0/0:73.8653:12:12:450:0:0:0,-3.61236,-10 0/0:99:39:39:1392:0:0:0,-10,-10 0/0:91.9267:18:18:668:0:0:0,-5.41854,-10 0/0:55.8035:6:6:226:0:0:0,-1.80618,-10 0/0:94.9367:19:19:682:0:0:0,-5.71957,-10 0/0:58.8138:7:7:262:0:0:0,-2.10721,-10 0/0:94.9367:19:19:716:0:0:0,-5.71957,-10 0/0:55.8035:6:6:223:0:0:0,-1.80618,-10 0/0:55.8035:6:6:228:0:0:0,-1.80618,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:67.8447:10:10:376:0:0:0,-3.0103,-10 0/0:82.8961:15:15:552:0:0:0,-4.51545,-10 0/0:64.8344:9:9:340:0:0:0,-2.70927,-10 0/0:64.8344:9:9:318:0:0:0,-2.70927,-10 0/0:67.8447:10:10:380:0:0:0,-3.0103,-10 0/0:99:28:28:1043:0:0:0,-8.42884,-10 0/0:70.855:11:11:415:0:0:0,-3.31133,-10 0/0:99:25:25:945:0:0:0,-7.52575,-10 0/0:76.8756:13:13:458:0:0:0,-3.91339,-10 0/0:58.8138:7:7:265:0:0:0,-2.10721,-10 0/0:99:29:29:1094:0:0:0,-8.72987,-10 0/0:76.8756:13:13:477:0:0:0,-3.91339,-10 0/0:76.8756:13:13:454:0:0:0,-3.91339,-10 0/0:99:26:26:982:0:0:0,-7.82678,-10 0/0:55.8035:6:6:217:0:0:0,-1.80618,-10 0/0:70.855:11:11:413:0:0:0,-3.31133,-10 0/0:88.9166:17:17:641:0:0:0,-5.11751,-10 0/1:99:18:8:297:10:379:-10,0,-10 0/0:82.8961:15:15:506:0:0:0,-4.51545,-10 0/0:79.8859:14:14:488:0:0:0,-4.21442,-10 0/0:55.8035:6:6:205:0:0:0,-1.80618,-10 0/0:82.8961:15:15:566:0:0:0,-4.51545,-10 0/0:64.8344:9:9:309:0:0:0,-2.70927,-10 0/0:55.8035:6:6:225:0:0:0,-1.80618,-10 0/0:70.855:11:11:398:0:0:0,-3.31133,-10 0/0:99:23:23:796:0:0:0,-6.92369,-10 0/0:99:23:23:850:0:0:0,-6.92369,-10 0/0:79.8859:14:14:510:0:0:0,-4.21442,-10 0/0:85.9064:16:16:607:0:0:0,-4.81648,-10 0/0:82.8961:15:15:508:0:0:0,-4.51545,-10 0/0:55.8035:6:6:203:0:0:0,-1.80618,-10 0/0:99:21:21:786:0:0:0,-6.32163,-10 0/0:67.8447:10:10:372:0:0:0,-3.0103,-10 0/0:52.7932:5:5:190:0:0:0,-1.50515,-10 0/0:82.8961:15:15:567:0:0:0,-4.51545,-10 0/0:73.8653:12:12:454:0:0:0,-3.61236,-10 0/0:79.8859:14:14:508:0:0:0,-4.21442,-10 scaffold_285 568704 . C A 216.849 . AB=0.75;ABP=9.52472;AC=1;AF=0.00543478;AN=184;AO=10;CIGAR=1X;DP=1326;DPB=1326;DPRA=1.00617;EPP=3.87889;EPPR=3.88384;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9985;NS=92;NUMALT=1;ODDS=8.95473;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=357;QR=48289;RO=1315;RPP=16.9077;RPPR=2729.69;RUN=1;SAF=5;SAP=3.0103;SAR=5;SRF=631;SRP=7.64883;SRR=684;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.0066:14:14:508:0:0:0,-4.21442,-10 0/0:53.9448:8:8:303:0:0:0,-2.40824,-10 0/0:62.9757:11:11:405:0:0:0,-3.31133,-10 0/0:72.0066:14:14:489:0:0:0,-4.21442,-10 0/0:65.986:12:12:444:0:0:0,-3.61236,-10 0/0:41.9036:4:4:151:0:0:0,-1.20412,-10 0/0:99:37:37:1355:0:0:0,-10,-10 0/0:93.0777:21:21:774:0:0:0,-6.32163,-10 0/0:68.9963:13:13:492:0:0:0,-3.91339,-10 0/0:38.8933:3:3:92:0:0:0,-0.90309,-8.58667 0/0:47.9242:6:6:228:0:0:0,-1.80618,-10 0/0:47.9242:6:6:225:0:0:0,-1.80618,-10 0/0:96.089:22:22:794:0:0:0,-6.62266,-10 0/0:84.0477:18:18:668:0:0:0,-5.41854,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/0:99:28:28:1039:0:0:0,-8.42884,-10 0/0:68.9963:13:13:480:0:0:0,-3.91339,-10 0/0:50.9345:7:7:264:0:0:0,-2.10721,-10 0/0:65.986:12:12:456:0:0:0,-3.61236,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:72.0066:14:14:500:0:0:0,-4.21442,-10 0/0:84.0477:18:18:674:0:0:0,-5.41854,-10 0/0:62.9757:11:11:414:0:0:0,-3.31133,-10 0/0:59.9654:10:10:367:0:0:0,-3.0103,-10 0/0:68.9963:13:13:480:0:0:0,-3.91339,-10 0/0:87.0579:19:19:666:0:0:0,-5.71957,-10 0/0:59.9654:10:10:380:0:0:0,-3.0103,-10 0/0:50.9345:7:7:243:0:0:0,-2.10721,-10 0/0:99:23:23:838:0:0:0,-6.92369,-10 0/0:99:29:29:1077:0:0:0,-8.72987,-10 0/0:38.8933:3:3:114:0:0:0,-0.90309,-10 0/0:41.9036:4:4:152:0:0:0,-1.20412,-10 0/0:65.986:12:12:445:0:0:0,-3.61236,-10 0/0:44.9139:5:5:181:0:0:0,-1.50515,-10 0/0:87.0579:19:19:715:0:0:0,-5.71957,-10 0/0:38.8933:3:3:113:0:0:0,-0.90309,-10 0/0:50.9345:7:7:266:0:0:0,-2.10721,-10 0/0:75.0169:15:15:537:0:0:0,-4.51545,-10 0/0:62.9757:11:11:393:0:0:0,-3.31133,-10 0/0:75.0169:15:15:543:0:0:0,-4.51545,-10 0/0:84.0477:18:18:676:0:0:0,-5.41854,-10 0/0:65.986:12:12:448:0:0:0,-3.61236,-10 0/0:75.0169:15:15:532:0:0:0,-4.51545,-10 0/0:96.089:22:22:819:0:0:0,-6.62266,-10 0/0:81.0375:17:17:646:0:0:0,-5.11751,-10 0/0:65.986:12:12:437:0:0:0,-3.61236,-10 0/0:99:37:37:1341:0:0:0,-10,-10 0/0:84.0477:18:18:670:0:0:0,-5.41854,-10 0/0:47.9242:6:6:228:0:0:0,-1.80618,-10 0/0:87.0579:19:19:691:0:0:0,-5.71957,-10 0/0:50.9345:7:7:259:0:0:0,-2.10721,-10 0/0:87.0579:19:19:672:0:0:0,-5.71957,-10 0/0:47.9242:6:6:222:0:0:0,-1.80618,-10 0/0:47.9242:6:6:228:0:0:0,-1.80618,-10 0/0:99:39:39:1419:0:0:0,-10,-10 0/0:59.9654:10:10:350:0:0:0,-3.0103,-10 0/0:75.0169:15:15:555:0:0:0,-4.51545,-10 0/0:56.9551:9:9:321:0:0:0,-2.70927,-10 0/0:56.9551:9:9:334:0:0:0,-2.70927,-10 0/0:59.9654:10:10:375:0:0:0,-3.0103,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:53.9448:8:8:300:0:0:0,-2.40824,-10 0/0:99:25:25:909:0:0:0,-7.52575,-10 0/1:99:12:3:90:9:342:-10,0,-7.13006 0/0:50.9345:7:7:266:0:0:0,-2.10721,-10 0/0:99:29:29:1085:0:0:0,-8.72987,-10 0/0:65.986:12:12:453:0:0:0,-3.61236,-10 0/0:68.9963:13:13:472:0:0:0,-3.91339,-10 0/0:99:26:26:970:0:0:0,-7.82678,-10 0/0:47.9242:6:6:228:0:0:0,-1.80618,-10 0/0:62.9757:11:11:391:0:0:0,-3.31133,-10 0/0:55.4933:17:16:604:1:15:0,-2.38706,-10 0/0:84.0477:18:18:669:0:0:0,-5.41854,-10 0/0:72.0066:14:14:505:0:0:0,-4.21442,-10 0/0:72.0066:14:14:504:0:0:0,-4.21442,-10 0/0:47.9242:6:6:204:0:0:0,-1.80618,-10 0/0:75.0169:15:15:560:0:0:0,-4.51545,-10 0/0:56.9551:9:9:310:0:0:0,-2.70927,-10 0/0:47.9242:6:6:228:0:0:0,-1.80618,-10 0/0:59.9654:10:10:367:0:0:0,-3.0103,-10 0/0:96.089:23:22:813:0:0:0,-6.62266,-10 0/0:99:23:23:825:0:0:0,-6.92369,-10 0/0:72.0066:14:14:514:0:0:0,-4.21442,-10 0/0:78.0272:16:16:607:0:0:0,-4.81648,-10 0/0:78.0272:16:16:566:0:0:0,-4.81648,-10 0/0:47.9242:6:6:228:0:0:0,-1.80618,-10 0/0:90.0684:20:20:750:0:0:0,-6.0206,-10 0/0:59.9654:10:10:375:0:0:0,-3.0103,-10 0/0:44.9139:5:5:189:0:0:0,-1.50515,-10 0/0:75.0169:15:15:566:0:0:0,-4.51545,-10 0/0:65.986:12:12:417:0:0:0,-3.61236,-10 0/0:72.0066:14:14:508:0:0:0,-4.21442,-10 scaffold_285 568710 . C T 594.32 . AB=0;ABP=0;AC=4;AF=0.0217391;AN=184;AO=30;CIGAR=1X;DP=1325;DPB=1325;DPRA=1.45133;EPP=5.61607;EPPR=4.62172;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9985;NS=92;NUMALT=1;ODDS=0.897307;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1037;QR=47630;RO=1295;RPP=68.1545;RPPR=2737.44;RUN=1;SAF=12;SAP=5.61607;SAR=18;SRF=623;SRP=7.03633;SRR=672;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:87.9103:14:14:521:0:0:0,-4.21442,-10 0/0:69.8487:8:8:303:0:0:0,-2.40824,-10 0/0:78.8796:11:11:402:0:0:0,-3.31133,-10 0/0:87.9103:14:14:490:0:0:0,-4.21442,-10 0/0:81.8898:12:12:432:0:0:0,-3.61236,-10 0/0:57.8075:4:4:151:0:0:0,-1.20412,-10 0/0:99:37:37:1360:0:0:0,-10,-10 0/0:99:21:21:793:0:0:0,-6.32163,-10 0/0:84.9001:13:13:492:0:0:0,-3.91339,-10 0/0:54.7972:3:3:112:0:0:0,-0.90309,-10 0/0:63.8281:6:6:228:0:0:0,-1.80618,-10 0/0:63.8281:6:6:227:0:0:0,-1.80618,-10 0/0:99:22:22:808:0:0:0,-6.62266,-10 0/0:99:18:18:661:0:0:0,-5.41854,-10 0/0:99:30:30:1099:0:0:0,-9.0309,-10 0/0:99:28:28:1036:0:0:0,-8.42884,-10 0/0:84.9001:13:13:489:0:0:0,-3.91339,-10 0/0:66.8384:7:7:266:0:0:0,-2.10721,-10 0/0:81.8898:12:12:453:0:0:0,-3.61236,-10 0/0:99:33:33:1181:0:0:0,-9.93399,-10 0/0:87.9103:14:14:532:0:0:0,-4.21442,-10 0/0:99:18:18:670:0:0:0,-5.41854,-10 0/0:78.8796:11:11:393:0:0:0,-3.31133,-10 0/0:75.8693:10:10:375:0:0:0,-3.0103,-10 0/0:84.9001:13:13:484:0:0:0,-3.91339,-10 0/0:99:19:19:718:0:0:0,-5.71957,-10 0/0:75.8693:10:10:373:0:0:0,-3.0103,-10 0/0:66.8384:7:7:263:0:0:0,-2.10721,-10 0/0:99:23:23:847:0:0:0,-6.92369,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:54.7972:3:3:105:0:0:0,-0.90309,-9.8 0/0:57.8075:4:4:152:0:0:0,-1.20412,-10 0/0:81.8898:12:12:445:0:0:0,-3.61236,-10 0/0:60.8178:5:5:188:0:0:0,-1.50515,-10 0/0:99:19:19:687:0:0:0,-5.71957,-10 0/0:54.7972:3:3:100:0:0:0,-0.90309,-9.33333 0/0:66.8384:7:7:261:0:0:0,-2.10721,-10 0/0:90.9204:15:15:558:0:0:0,-4.51545,-10 0/0:78.8796:11:11:416:0:0:0,-3.31133,-10 0/0:90.9204:15:15:543:0:0:0,-4.51545,-10 0/0:99:18:18:670:0:0:0,-5.41854,-10 0/0:81.8898:12:12:451:0:0:0,-3.61236,-10 0/0:90.9204:15:15:541:0:0:0,-4.51545,-10 0/0:99:22:22:828:0:0:0,-6.62266,-10 0/0:50.5889:17:16:607:1:38:0,-0.087061,-10 0/0:81.8898:12:12:419:0:0:0,-3.61236,-10 0/0:99:37:36:1338:1:15:0,-8.06991,-10 0/0:99:18:18:663:0:0:0,-5.41854,-10 0/0:63.8281:6:6:223:0:0:0,-1.80618,-10 0/0:99:19:19:674:0:0:0,-5.71957,-10 0/0:66.8384:7:7:255:0:0:0,-2.10721,-10 0/0:99:19:19:686:0:0:0,-5.71957,-10 0/0:63.8281:6:6:228:0:0:0,-1.80618,-10 0/0:63.8281:6:6:224:0:0:0,-1.80618,-10 0/0:99:39:39:1466:0:0:0,-10,-10 0/0:75.8693:10:10:344:0:0:0,-3.0103,-10 0/0:90.9204:15:15:566:0:0:0,-4.51545,-10 0/0:72.859:9:9:325:0:0:0,-2.70927,-10 0/0:72.859:9:9:320:0:0:0,-2.70927,-10 0/0:75.8693:10:10:362:0:0:0,-3.0103,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:69.8487:8:8:302:0:0:0,-2.40824,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:78.8796:11:11:384:0:0:0,-3.31133,-10 0/0:66.8384:7:7:260:0:0:0,-2.10721,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:81.8898:12:12:427:0:0:0,-3.61236,-10 0/0:84.9001:13:13:467:0:0:0,-3.91339,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:63.8281:6:6:226:0:0:0,-1.80618,-10 0/0:78.8796:11:11:409:0:0:0,-3.31133,-10 0/0:96.9421:17:17:592:0:0:0,-5.11751,-10 0/0:99:18:18:683:0:0:0,-5.41854,-10 1/1:6.48664:14:0:0:14:484:-10,-4.21442,0 1/1:6.48664:14:0:0:14:500:-10,-4.21442,0 0/0:63.8281:6:6:206:0:0:0,-1.80618,-10 0/0:90.9204:15:15:561:0:0:0,-4.51545,-10 0/0:72.859:9:9:308:0:0:0,-2.70927,-10 0/0:63.8281:6:6:201:0:0:0,-1.80618,-10 0/0:75.8693:10:10:362:0:0:0,-3.0103,-10 0/0:99:23:23:791:0:0:0,-6.92369,-10 0/0:99:23:23:846:0:0:0,-6.92369,-10 0/0:87.9103:14:14:517:0:0:0,-4.21442,-10 0/0:93.9302:16:16:601:0:0:0,-4.81648,-10 0/0:93.9302:16:16:576:0:0:0,-4.81648,-10 0/0:63.8281:6:6:204:0:0:0,-1.80618,-10 0/0:99:20:20:757:0:0:0,-6.0206,-10 0/0:75.8693:10:10:377:0:0:0,-3.0103,-10 0/0:60.8178:5:5:190:0:0:0,-1.50515,-10 0/0:90.9204:15:15:569:0:0:0,-4.51545,-10 0/0:81.8898:12:12:423:0:0:0,-3.61236,-10 0/0:87.9103:14:14:514:0:0:0,-4.21442,-10 scaffold_285 646439 . T C 1764.35 . AB=0.537313;ABP=3.82055;AC=8;AF=0.0434783;AN=184;AO=71;CIGAR=1X;DP=1383;DPB=1383;DPRA=1.16425;EPP=3.04088;EPPR=7.8439;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=2.39967;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2583;QR=47358;RO=1310;RPP=157.185;RPPR=2847.64;RUN=1;SAF=36;SAP=3.04088;SAR=35;SRF=628;SRP=7.8439;SRR=682;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:33.3214:9:9:293:0:0:0,-2.70927,-10 0/0:15.2596:3:3:114:0:0:0,-0.90309,-10 0/0:30.3111:8:8:283:0:0:0,-2.40824,-10 0/0:27.3008:7:7:266:0:0:0,-2.10721,-10 0/0:45.3626:13:13:467:0:0:0,-3.91339,-10 0/0:36.3317:10:10:369:0:0:0,-3.0103,-10 0/0:81.4861:25:25:908:0:0:0,-7.52575,-10 0/0:78.4758:24:24:847:0:0:0,-7.22472,-10 0/0:36.3317:10:10:338:0:0:0,-3.0103,-10 0/0:15.2596:3:3:112:0:0:0,-0.90309,-10 0/0:24.2905:6:6:225:0:0:0,-1.80618,-10 0/0:18.2699:4:4:143:0:0:0,-1.20412,-10 0/0:75.4656:23:23:826:0:0:0,-6.92369,-10 0/0:60.4141:18:18:667:0:0:0,-5.41854,-10 0/0:57.4038:17:17:640:0:0:0,-5.11751,-10 0/0:78.4758:24:24:838:0:0:0,-7.22472,-10 0/0:27.3008:7:7:264:0:0:0,-2.10721,-10 0/0:33.3214:9:9:334:0:0:0,-2.70927,-10 0/0:66.4347:20:20:748:0:0:0,-6.0206,-10 0/0:93.5258:29:29:1085:0:0:0,-8.72987,-10 0/0:39.342:11:11:385:0:0:0,-3.31133,-10 0/0:66.4347:20:20:698:0:0:0,-6.0206,-10 0/0:30.3111:8:8:287:0:0:0,-2.40824,-10 0/0:72.4552:22:22:800:0:0:0,-6.62266,-10 1/1:18.9508:18:0:0:18:640:-10,-5.41854,0 0/1:99:24:13:489:11:414:-10,0,-10 0/0:36.3317:10:10:350:0:0:0,-3.0103,-10 0/0:42.3523:12:12:442:0:0:0,-3.61236,-10 0/0:42.3523:12:12:445:0:0:0,-3.61236,-10 0/0:99:38:38:1395:0:0:0,-10,-10 0/0:18.2699:4:4:143:0:0:0,-1.20412,-10 0/0:36.3317:11:10:346:0:0:0,-3.0103,-10 0/0:30.3111:8:8:297:0:0:0,-2.40824,-10 0/0:39.342:11:11:394:0:0:0,-3.31133,-10 0/0:36.3317:10:10:349:0:0:0,-3.0103,-10 0/0:12.2493:2:2:76:0:0:0,-0.60206,-7.22 0/0:33.3214:9:9:316:0:0:0,-2.70927,-10 0/0:69.4449:21:21:737:0:0:0,-6.32163,-10 0/0:30.3111:8:8:304:0:0:0,-2.40824,-10 0/0:33.3214:9:9:342:0:0:0,-2.70927,-10 0/0:75.4656:23:23:796:0:0:0,-6.92369,-10 0/0:42.3523:12:12:441:0:0:0,-3.61236,-10 0/0:54.3935:16:16:562:0:0:0,-4.81648,-10 0/0:99:33:33:1201:0:0:0,-9.93399,-10 0/0:66.4347:20:20:742:0:0:0,-6.0206,-10 0/0:39.342:11:11:418:0:0:0,-3.31133,-10 0/0:99:33:33:1152:0:0:0,-9.93399,-10 0/0:75.4656:23:23:828:0:0:0,-6.92369,-10 0/0:36.3317:10:10:369:0:0:0,-3.0103,-10 0/0:81.4861:25:25:883:0:0:0,-7.52575,-10 0/0:36.3317:10:10:364:0:0:0,-3.0103,-10 0/0:84.4963:26:26:918:0:0:0,-7.82678,-10 0/0:21.2802:5:5:187:0:0:0,-1.50515,-10 0/0:36.3317:10:10:376:0:0:0,-3.0103,-10 0/0:99:35:35:1256:0:0:0,-10,-10 0/0:54.3935:16:16:588:0:0:0,-4.81648,-10 0/0:57.4038:18:17:610:0:0:0,-5.11751,-10 0/0:18.2699:4:4:152:0:0:0,-1.20412,-10 1/1:12.9302:16:0:0:16:587:-10,-4.81648,0 0/0:30.3111:8:8:285:0:0:0,-2.40824,-10 0/0:96.5346:30:30:1103:0:0:0,-9.0309,-10 0/0:69.4449:21:21:754:0:0:0,-6.32163,-10 0/0:99:37:37:1347:0:0:0,-10,-10 0/0:63.4244:19:19:693:0:0:0,-5.71957,-10 0/0:36.3317:10:10:380:0:0:0,-3.0103,-10 0/0:78.4758:24:24:762:0:0:0,-7.22472,-10 0/0:39.342:11:11:380:0:0:0,-3.31133,-10 0/0:27.3008:7:7:253:0:0:0,-2.10721,-10 0/0:93.5258:29:29:1017:0:0:0,-8.72987,-10 0/0:30.3111:8:8:289:0:0:0,-2.40824,-10 0/0:48.3729:14:14:504:0:0:0,-4.21442,-10 0/1:99:17:10:378:7:259:-10,0,-10 0/0:66.4347:20:20:738:0:0:0,-6.0206,-10 0/1:0.0621532:9:0:0:9:304:-10,-2.70927,0 0/1:99:17:8:304:9:341:-10,0,-10 0/0:21.2802:5:5:188:0:0:0,-1.50515,-10 0/0:39.342:11:11:393:0:0:0,-3.31133,-10 0/0:45.3626:13:13:487:0:0:0,-3.91339,-10 0/0:18.2699:4:4:149:0:0:0,-1.20412,-10 0/0:36.3317:10:10:367:0:0:0,-3.0103,-10 0/0:72.4552:22:22:773:0:0:0,-6.62266,-10 0/0:18.5278:20:19:709:1:38:0,-0.91957,-10 0/0:48.3729:14:14:504:0:0:0,-4.21442,-10 0/0:54.3935:16:16:588:0:0:0,-4.81648,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:21.2802:5:5:186:0:0:0,-1.50515,-10 0/0:45.3626:13:13:474:0:0:0,-3.91339,-10 0/0:36.3317:10:10:362:0:0:0,-3.0103,-10 0/0:15.2596:3:3:109:0:0:0,-0.90309,-10 0/0:60.4141:18:18:643:0:0:0,-5.41854,-10 0/0:42.3523:12:12:451:0:0:0,-3.61236,-10 0/0:33.3214:9:9:336:0:0:0,-2.70927,-10 scaffold_285 649980 . C T 2229.33 . AB=0.586207;ABP=12.3701;AC=9;AF=0.0494505;AN=182;AO=87;CIGAR=1X;DP=1677;DPB=1677;DPRA=1.13276;EPP=4.23331;EPPR=10.108;GTI=4;LEN=1;MEANALT=1.09091;MQM=59.977;MQMR=59.983;NS=91;NUMALT=1;ODDS=3.97058;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3166;QR=57230;RO=1586;RPP=183.342;RPPR=3369.24;RUN=1;SAF=46;SAP=3.63429;SAR=41;SRF=820;SRP=7.00274;SRR=766;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:80.6516:21:21:782:0:0:0,-6.32163,-10 0/1:0.00124757:6:0:0:6:224:-10,-1.80618,0 0/0:59.5796:14:14:519:0:0:0,-4.21442,-10 0/0:59.5796:14:14:500:0:0:0,-4.21442,-10 0/0:44.5281:9:9:323:0:0:0,-2.70927,-10 .:.:.:.:.:.:.:. 0/0:99:45:44:1522:0:0:0,-10,-10 0/0:89.6819:24:24:767:0:0:0,-7.22472,-10 0/0:77.6414:20:20:755:0:0:0,-6.0206,-10 0/1:0.00249551:7:0:0:7:262:-10,-2.10721,0 0/1:0.000623742:5:0:0:5:186:-10,-1.50515,0 0/0:44.5281:9:9:325:0:0:0,-2.70927,-10 0/0:99:30:30:1105:0:0:0,-9.0309,-10 0/1:99:28:13:482:15:555:-10,0,-10 0/0:95.7042:26:26:940:0:0:0,-7.82678,-10 0/0:53.559:12:12:412:0:0:0,-3.61236,-10 0/0:74.631:19:19:651:0:0:0,-5.71957,-10 0/0:47.5384:10:10:365:0:0:0,-3.0103,-10 0/0:74.631:19:19:685:0:0:0,-5.71957,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:44.5281:9:9:339:0:0:0,-2.70927,-10 0/0:92.6915:25:25:890:0:0:0,-7.52575,-10 0/0:35.4972:6:6:228:0:0:0,-1.80618,-10 0/0:38.5075:7:7:236:0:0:0,-2.10721,-10 0/0:86.6719:23:23:794:0:0:0,-6.92369,-10 0/0:98.7082:28:27:975:0:0:0,-8.12781,-10 0/0:47.5384:10:10:352:0:0:0,-3.0103,-10 0/0:77.6414:20:20:716:0:0:0,-6.0206,-10 0/0:56.5693:13:13:491:0:0:0,-3.91339,-10 0/0:71.6207:18:18:629:0:0:0,-5.41854,-10 0/0:29.4766:4:4:128:0:0:0,-1.20412,-10 0/0:59.5796:14:14:510:0:0:0,-4.21442,-10 0/0:74.631:19:19:713:0:0:0,-5.71957,-10 0/0:59.5796:14:14:531:0:0:0,-4.21442,-10 0/0:68.6105:17:17:593:0:0:0,-5.11751,-10 0/0:35.4972:6:6:228:0:0:0,-1.80618,-10 0/0:74.631:19:19:704:0:0:0,-5.71957,-10 0/0:80.6516:21:21:781:0:0:0,-6.32163,-10 0/0:89.6819:24:24:874:0:0:0,-7.22472,-10 0/1:99:18:9:316:9:341:-10,0,-10 0/0:99:35:35:1275:0:0:0,-10,-10 0/0:59.5796:14:14:519:0:0:0,-4.21442,-10 0/0:92.6915:25:25:889:0:0:0,-7.52575,-10 0/1:99:36:21:779:15:560:-10,0,-10 0/0:71.6207:18:18:644:0:0:0,-5.41854,-10 0/0:41.5178:8:8:299:0:0:0,-2.40824,-10 0/0:50.5487:11:11:415:0:0:0,-3.31133,-10 0/0:99:31:31:1123:0:0:0,-9.33193,-10 0/0:56.5693:13:13:460:0:0:0,-3.91339,-10 0/0:95.7083:35:34:1231:1:15:0,-7.49198,-10 0/0:41.5178:8:8:291:0:0:0,-2.40824,-10 0/0:99:42:42:1504:0:0:0,-10,-10 0/0:71.6207:18:18:663:0:0:0,-5.41854,-10 0/0:53.559:12:12:420:0:0:0,-3.61236,-10 0/0:80.6516:21:21:722:0:0:0,-6.32163,-10 0/0:59.5796:14:14:478:0:0:0,-4.21442,-10 0/0:50.5487:11:11:376:0:0:0,-3.31133,-10 0/0:26.4663:4:3:100:0:0:0,-0.90309,-9.1375 0/0:56.5693:13:13:441:0:0:0,-3.91339,-10 0/0:29.4766:4:4:152:0:0:0,-1.20412,-10 0/0:92.6915:25:25:926:0:0:0,-7.52575,-10 0/0:71.6207:18:18:649:0:0:0,-5.41854,-10 0/0:99:46:44:1567:1:36:0,-8.57814,-10 0/0:47.5384:10:10:367:0:0:0,-3.0103,-10 0/0:50.5487:11:11:394:0:0:0,-3.31133,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:50.5487:11:11:414:0:0:0,-3.31133,-10 0/0:50.5487:11:11:408:0:0:0,-3.31133,-10 0/0:99:39:39:1433:0:0:0,-10,-10 0/0:50.5487:11:11:409:0:0:0,-3.31133,-10 0/0:62.5899:15:15:549:0:0:0,-4.51545,-10 0/0:99:32:32:1152:0:0:0,-9.63296,-10 0/0:99:38:38:1366:0:0:0,-10,-10 0/0:77.6414:20:20:695:0:0:0,-6.0206,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:65.6002:16:16:564:0:0:0,-4.81648,-10 0/0:68.6105:17:17:601:0:0:0,-5.11751,-10 0/0:44.5281:9:9:326:0:0:0,-2.70927,-10 0/0:50.5487:11:11:406:0:0:0,-3.31133,-10 0/0:53.559:12:12:448:0:0:0,-3.61236,-10 0/0:99:42:42:1487:0:0:0,-10,-10 0/0:92.6915:25:25:948:0:0:0,-7.52575,-10 0/1:99:23:11:415:12:417:-10,0,-10 0/0:99:29:29:1054:0:0:0,-8.72987,-10 0/0:86.6719:23:23:868:0:0:0,-6.92369,-10 0/0:38.5075:7:7:253:0:0:0,-2.10721,-10 0/0:86.6719:23:23:830:0:0:0,-6.92369,-10 0/0:59.5796:14:14:516:0:0:0,-4.21442,-10 0/0:35.4972:6:6:193:0:0:0,-1.80618,-10 0/1:99:10:6:204:4:152:-10,0,-10 0/0:53.559:12:12:429:0:0:0,-3.61236,-10 0/1:0.0805761:12:0:0:12:418:-10,-3.61236,0 scaffold_285 649995 . G A 1298.1 . AB=0.622222;ABP=8.84915;AC=5;AF=0.0274725;AN=182;AO=54;CIGAR=1X;DP=1678;DPB=1678;DPRA=1.16939;EPP=5.5839;EPPR=12.6769;GTI=2;LEN=1;MEANALT=1;MQM=59.963;MQMR=59.9649;NS=91;NUMALT=1;ODDS=4.33166;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1900;QR=59311;RO=1623;RPP=111.745;RPPR=3432.41;RUN=1;SAF=22;SAP=7.03155;SAR=32;SRF=845;SRP=9.0163;SRR=778;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:79.2804:21:21:760:0:0:0,-6.32163,-10 0/0:34.126:6:6:228:0:0:0,-1.80618,-10 0/0:58.2084:14:14:521:0:0:0,-4.21442,-10 0/0:58.2084:14:14:521:0:0:0,-4.21442,-10 0/0:43.1569:9:9:342:0:0:0,-2.70927,-10 .:.:.:.:.:.:.:. 0/0:99:45:44:1507:0:0:0,-10,-10 0/0:88.311:24:24:850:0:0:0,-7.22472,-10 0/0:76.2701:20:20:753:0:0:0,-6.0206,-10 0/0:37.1363:7:7:264:0:0:0,-2.10721,-10 0/0:31.1157:5:5:190:0:0:0,-1.50515,-10 0/0:43.1569:9:9:338:0:0:0,-2.70927,-10 0/0:99:30:30:1113:0:0:0,-9.0309,-10 0/0:99:28:28:1004:0:0:0,-8.42884,-10 0/0:94.3305:26:26:971:0:0:0,-7.82678,-10 0/0:52.1878:12:12:419:0:0:0,-3.61236,-10 0/0:48.2331:19:18:627:1:16:0,-2.84082,-10 0/0:46.1672:10:10:380:0:0:0,-3.0103,-10 0/0:73.2598:19:19:687:0:0:0,-5.71957,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:43.1569:9:9:338:0:0:0,-2.70927,-10 0/0:91.3209:25:25:939:0:0:0,-7.52575,-10 0/1:0.000564174:6:0:0:6:228:-10,-1.80618,0 0/0:37.1363:7:7:231:0:0:0,-2.10721,-10 0/0:85.3009:23:23:847:0:0:0,-6.92369,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:46.1672:10:10:378:0:0:0,-3.0103,-10 0/0:76.2701:20:20:725:0:0:0,-6.0206,-10 0/0:55.1981:13:13:480:0:0:0,-3.91339,-10 0/0:70.2495:18:18:640:0:0:0,-5.41854,-10 0/0:28.1054:4:4:141:0:0:0,-1.20412,-10 0/0:58.2084:14:14:498:0:0:0,-4.21442,-10 0/0:73.2598:19:19:715:0:0:0,-5.71957,-10 0/0:58.2084:14:14:527:0:0:0,-4.21442,-10 0/0:67.2393:17:17:618:0:0:0,-5.11751,-10 0/0:34.126:6:6:226:0:0:0,-1.80618,-10 0/0:73.2598:19:19:717:0:0:0,-5.71957,-10 0/0:79.2804:21:21:772:0:0:0,-6.32163,-10 0/0:88.311:24:24:874:0:0:0,-7.22472,-10 0/0:70.2495:18:18:680:0:0:0,-5.41854,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:58.2084:14:14:529:0:0:0,-4.21442,-10 0/0:91.3209:25:25:890:0:0:0,-7.52575,-10 0/0:99:36:36:1347:0:0:0,-10,-10 0/0:70.2495:18:18:669:0:0:0,-5.41854,-10 0/0:40.1466:8:8:302:0:0:0,-2.40824,-10 0/0:49.1775:11:11:418:0:0:0,-3.31133,-10 0/0:99:31:31:1122:0:0:0,-9.33193,-10 0/0:55.1981:13:13:453:0:0:0,-3.91339,-10 0/1:99:35:17:613:18:650:-10,0,-10 0/0:40.1466:8:8:289:0:0:0,-2.40824,-10 0/0:99:43:43:1526:0:0:0,-10,-10 0/0:70.2495:18:18:659:0:0:0,-5.41854,-10 0/0:52.1878:12:12:421:0:0:0,-3.61236,-10 0/0:79.2804:21:21:759:0:0:0,-6.32163,-10 0/0:58.2084:14:14:517:0:0:0,-4.21442,-10 0/0:49.1775:11:11:416:0:0:0,-3.31133,-10 0/1:0.000141037:4:0:0:4:125:-10,-1.20412,0 0/0:55.1981:13:13:492:0:0:0,-3.91339,-10 0/0:28.1054:4:4:145:0:0:0,-1.20412,-10 0/0:91.3209:25:25:918:0:0:0,-7.52575,-10 0/0:70.2495:18:18:630:0:0:0,-5.41854,-10 0/0:99:46:45:1611:1:16:0,-10,-10 0/0:46.1672:10:10:369:0:0:0,-3.0103,-10 0/0:49.1775:11:11:400:0:0:0,-3.31133,-10 0/0:99:31:31:1163:0:0:0,-9.33193,-10 0/0:49.1775:11:11:417:0:0:0,-3.31133,-10 0/0:49.1775:11:11:414:0:0:0,-3.31133,-10 0/0:99:39:39:1430:0:0:0,-10,-10 0/0:49.1775:11:11:409:0:0:0,-3.31133,-10 0/0:61.2187:15:15:541:0:0:0,-4.51545,-10 0/0:99:32:32:1176:0:0:0,-9.63296,-10 0/0:99:38:38:1400:0:0:0,-10,-10 0/0:76.2701:20:20:742:0:0:0,-6.0206,-10 0/0:99:29:29:1046:0:0:0,-8.72987,-10 0/0:39.9485:16:15:562:1:16:0,-2.01236,-10 0/0:67.2393:17:17:611:0:0:0,-5.11751,-10 0/0:43.1569:9:9:294:0:0:0,-2.70927,-10 0/0:49.1775:11:11:417:0:0:0,-3.31133,-10 0/0:52.1878:12:12:455:0:0:0,-3.61236,-10 0/0:99:42:42:1498:0:0:0,-10,-10 0/0:91.3209:25:25:908:0:0:0,-7.52575,-10 0/0:85.3009:23:23:842:0:0:0,-6.92369,-10 0/0:99:29:29:1060:0:0:0,-8.72987,-10 0/0:85.3009:23:23:862:0:0:0,-6.92369,-10 0/0:37.1363:7:7:250:0:0:0,-2.10721,-10 1/1:18.8972:23:0:0:23:849:-10,-6.92369,0 0/0:58.2084:14:14:517:0:0:0,-4.21442,-10 0/0:34.126:6:6:226:0:0:0,-1.80618,-10 0/0:46.1672:10:10:356:0:0:0,-3.0103,-10 0/0:52.1878:12:12:433:0:0:0,-3.61236,-10 0/0:52.1878:12:12:434:0:0:0,-3.61236,-10 scaffold_285 650016 . G C 4027.42 . AB=0.512438;ABP=3.28038;AC=17;AF=0.0934066;AN=182;AO=152;CIGAR=1X;DP=1674;DPB=1674;DPRA=1.04433;EPP=3.06744;EPPR=7.0206;GTI=3;LEN=1;MEANALT=1;MQM=59.9868;MQMR=59.9625;NS=91;NUMALT=1;ODDS=2.39216;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5572;QR=55820;RO=1521;RPP=333.074;RPPR=3305.82;RUN=1;SAF=77;SAP=3.06744;SAR=75;SRF=787;SRP=7.0206;SRR=734;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.6697:21:21:782:0:0:0,-6.32163,-10 0/1:0.158687:6:0:0:6:224:-10,-1.80618,0 0/0:57.5976:14:14:500:0:0:0,-4.21442,-10 0/0:57.5976:14:14:524:0:0:0,-4.21442,-10 0/0:42.5461:9:9:338:0:0:0,-2.70927,-10 .:.:.:.:.:.:.:. 0/0:99:45:45:1612:0:0:0,-10,-10 0/0:87.7007:24:24:866:0:0:0,-7.22472,-10 0/0:75.6594:20:20:759:0:0:0,-6.0206,-10 0/1:0.323394:7:0:0:7:266:-10,-2.10721,0 0/1:0.0786189:5:0:0:5:190:-10,-1.50515,0 0/0:42.5461:9:9:330:0:0:0,-2.70927,-10 0/0:99:30:30:1131:0:0:0,-9.0309,-10 0/1:99:27:13:468:14:526:-10,0,-10 0/0:90.7111:25:25:930:0:0:0,-7.52575,-10 0/0:51.577:12:12:439:0:0:0,-3.61236,-10 0/0:72.6491:19:19:658:0:0:0,-5.71957,-10 0/0:45.5564:10:10:380:0:0:0,-3.0103,-10 0/0:72.6491:19:19:711:0:0:0,-5.71957,-10 0/0:99:33:33:1195:0:0:0,-9.93399,-10 0/1:99:9:4:149:5:188:-10,0,-10 0/1:99:25:16:578:9:318:-10,0,-10 0/0:33.5152:6:6:227:0:0:0,-1.80618,-10 0/0:36.5255:7:7:243:0:0:0,-2.10721,-10 0/0:84.6904:23:23:848:0:0:0,-6.92369,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:45.5564:10:10:377:0:0:0,-3.0103,-10 0/0:75.6594:20:20:718:0:0:0,-6.0206,-10 0/0:54.5873:13:13:493:0:0:0,-3.91339,-10 0/0:69.6388:18:18:642:0:0:0,-5.41854,-10 0/0:27.4946:4:4:143:0:0:0,-1.20412,-10 0/0:57.5976:14:14:528:0:0:0,-4.21442,-10 0/0:72.6491:19:19:711:0:0:0,-5.71957,-10 0/0:57.5976:14:14:531:0:0:0,-4.21442,-10 0/0:66.6285:17:17:612:0:0:0,-5.11751,-10 0/0:33.5152:6:6:219:0:0:0,-1.80618,-10 0/0:72.6491:19:19:707:0:0:0,-5.71957,-10 0/0:78.6697:21:21:765:0:0:0,-6.32163,-10 0/0:84.6904:23:23:830:0:0:0,-6.92369,-10 0/1:99:18:9:319:9:341:-10,0,-10 0/0:99:35:35:1294:0:0:0,-10,-10 1/1:18.0047:14:0:0:14:532:-10,-4.21442,0 0/0:87.7007:24:24:863:0:0:0,-7.22472,-10 0/1:99:36:21:781:15:555:-10,0,-10 0/0:69.6388:18:18:674:0:0:0,-5.41854,-10 0/0:39.5358:8:8:294:0:0:0,-2.40824,-10 0/0:48.5667:11:11:416:0:0:0,-3.31133,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:54.5873:13:13:469:0:0:0,-3.91339,-10 0/1:99:35:18:682:17:618:-10,0,-10 0/0:39.5358:8:8:276:0:0:0,-2.40824,-10 0/0:99:43:43:1552:0:0:0,-10,-10 0/0:69.6388:18:18:642:0:0:0,-5.41854,-10 0/0:51.577:12:12:448:0:0:0,-3.61236,-10 1/1:39.0768:21:0:0:21:732:-10,-6.32163,0 0/0:57.5976:14:14:516:0:0:0,-4.21442,-10 0/0:48.5667:11:11:406:0:0:0,-3.31133,-10 0/0:27.4946:4:4:140:0:0:0,-1.20412,-10 0/0:54.5873:13:13:467:0:0:0,-3.91339,-10 0/0:27.4946:4:4:152:0:0:0,-1.20412,-10 0/0:90.7111:25:25:927:0:0:0,-7.52575,-10 0/0:69.6388:18:18:657:0:0:0,-5.41854,-10 0/0:99:46:45:1602:1:38:0,-8.38462,-10 0/0:42.5461:10:9:341:0:0:0,-2.70927,-10 0/0:48.5667:11:11:404:0:0:0,-3.31133,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:48.5667:11:11:416:0:0:0,-3.31133,-10 0/0:48.5667:11:11:391:0:0:0,-3.31133,-10 0/0:99:39:39:1467:0:0:0,-10,-10 0/0:25.9394:11:10:379:1:15:0,-0.769937,-10 0/0:60.6079:15:15:530:0:0:0,-4.51545,-10 0/0:99:32:32:1174:0:0:0,-9.63296,-10 0/0:99:38:38:1365:0:0:0,-10,-10 0/0:75.6594:20:20:708:0:0:0,-6.0206,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:63.6182:16:16:601:0:0:0,-4.81648,-10 0/0:66.6285:17:17:636:0:0:0,-5.11751,-10 0/0:42.5461:9:9:313:0:0:0,-2.70927,-10 0/0:48.5667:11:11:409:0:0:0,-3.31133,-10 0/0:51.577:12:12:455:0:0:0,-3.61236,-10 0/0:99:42:42:1522:0:0:0,-10,-10 0/0:90.7111:25:25:928:0:0:0,-7.52575,-10 0/1:99:23:11:417:12:436:-10,0,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:84.6904:23:23:874:0:0:0,-6.92369,-10 0/0:36.5255:7:7:254:0:0:0,-2.10721,-10 0/0:84.6904:23:23:844:0:0:0,-6.92369,-10 0/0:57.5976:14:14:526:0:0:0,-4.21442,-10 0/0:33.5152:6:6:223:0:0:0,-1.80618,-10 0/1:99:10:6:216:4:152:-10,0,-10 0/0:51.577:12:12:449:0:0:0,-3.61236,-10 1/1:11.9841:12:0:0:12:441:-10,-3.61236,0 scaffold_285 674803 . G A 622.525 . AB=0.533333;ABP=3.44459;AC=1;AF=0.00543478;AN=184;AO=27;CIGAR=1X;DP=2426;DPB=2426;DPRA=1.37801;EPP=3.73412;EPPR=3.99602;GTI=0;LEN=1;MEANALT=1;MQM=58.8889;MQMR=59.8258;NS=92;NUMALT=1;ODDS=5.19041;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=921;QR=87515;RO=2399;RPP=61.6401;RPPR=5212.37;RUN=1;SAF=12;SAP=3.73412;SAR=15;SRF=1183;SRP=3.99602;SRR=1216;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:76.8486:22:22:790:0:0:0,-6.62266,-10 0/0:31.6941:7:7:261:0:0:0,-2.10721,-10 0/0:88.8888:26:26:947:0:0:0,-7.82678,-10 0/0:52.7662:14:14:517:0:0:0,-4.21442,-10 0/0:64.8074:18:18:637:0:0:0,-5.41854,-10 0/0:49.7559:13:13:476:0:0:0,-3.91339,-10 0/0:99:50:50:1769:0:0:0,-10,-10 0/0:97.9188:29:29:1088:0:0:0,-8.72987,-10 0/0:52.7662:14:14:521:0:0:0,-4.21442,-10 0/0:25.6735:5:5:185:0:0:0,-1.50515,-10 0/0:31.6941:7:7:261:0:0:0,-2.10721,-10 0/0:25.6735:5:5:180:0:0:0,-1.50515,-10 0/0:99:42:42:1539:0:0:0,-10,-10 0/0:99:49:49:1830:0:0:0,-10,-10 0/0:99:31:31:1092:0:0:0,-9.33193,-10 0/0:99:35:35:1249:0:0:0,-10,-10 0/0:99:35:35:1295:0:0:0,-10,-10 0/0:34.7044:8:8:298:0:0:0,-2.40824,-10 0/0:85.879:25:25:897:0:0:0,-7.52575,-10 0/0:99:57:57:2038:0:0:0,-10,-10 0/0:76.8486:22:22:816:0:0:0,-6.62266,-10 0/0:99:34:34:1184:0:0:0,-10,-10 0/0:64.8074:18:18:645:0:0:0,-5.41854,-10 0/0:79.8589:23:23:806:0:0:0,-6.92369,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:73.8383:21:21:769:0:0:0,-6.32163,-10 0/0:70.828:20:20:748:0:0:0,-6.0206,-10 0/0:79.8589:23:23:839:0:0:0,-6.92369,-10 0/0:99:39:39:1443:0:0:0,-10,-10 0/0:99:42:42:1534:0:0:0,-10,-10 0/0:46.7456:12:12:432:0:0:0,-3.61236,-10 0/0:25.6735:5:5:167:0:0:0,-1.50515,-10 0/0:88.8888:26:26:939:0:0:0,-7.82678,-10 0/0:67.8177:19:19:717:0:0:0,-5.71957,-10 0/0:43.7353:11:11:417:0:0:0,-3.31133,-10 0/0:25.6735:5:5:168:0:0:0,-1.50515,-10 0/0:31.6941:7:7:262:0:0:0,-2.10721,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:82.8692:24:24:871:0:0:0,-7.22472,-10 0/0:44.9407:20:19:685:1:16:0,-3.11957,-10 0/0:99:42:42:1551:0:0:0,-10,-10 0/0:79.8589:23:23:866:0:0:0,-6.92369,-10 0/0:73.8383:21:21:793:0:0:0,-6.32163,-10 0/0:99:58:58:2147:0:0:0,-10,-10 0/0:97.9188:29:29:1059:0:0:0,-8.72987,-10 0/0:85.879:25:25:914:0:0:0,-7.52575,-10 0/0:99:61:61:2279:0:0:0,-10,-10 0/0:99:38:38:1400:0:0:0,-10,-10 0/0:85.879:25:25:929:0:0:0,-7.52575,-10 0/0:99:39:39:1422:0:0:0,-10,-10 0/0:55.7765:15:15:554:0:0:0,-4.51545,-10 0/0:99:51:51:1857:0:0:0,-10,-10 0/0:79.8589:23:23:861:0:0:0,-6.92369,-10 0/0:34.7044:8:8:302:0:0:0,-2.40824,-10 0/0:99:57:56:2085:1:16:0,-10,-10 0/0:58.7868:16:16:602:0:0:0,-4.81648,-10 0/0:99:31:31:1115:0:0:0,-9.33193,-10 0/0:34.7044:8:8:278:0:0:0,-2.40824,-10 0/0:79.8589:23:23:764:0:0:0,-6.92369,-10 0/0:46.7456:12:12:456:0:0:0,-3.61236,-10 0/0:99:49:49:1784:0:0:0,-10,-10 0/0:99:32:32:1200:0:0:0,-9.63296,-10 0/0:99:56:56:2011:0:0:0,-10,-10 0/0:47.7391:21:20:728:1:16:0,-3.39941,-10 0/0:70.828:20:20:745:0:0:0,-6.0206,-10 0/0:99:45:45:1642:0:0:0,-10,-10 0/0:99:35:35:1246:0:0:0,-10,-10 0/0:70.828:20:20:741:0:0:0,-6.0206,-10 0/0:99:40:40:1432:0:0:0,-10,-10 0/0:52.7662:14:14:497:0:0:0,-4.21442,-10 0/0:82.8692:24:24:903:0:0:0,-7.22472,-10 0/0:99:47:47:1723:0:0:0,-10,-10 0/1:99:45:21:744:24:873:-10,0,-10 0/0:70.828:20:20:725:0:0:0,-6.0206,-10 0/0:99:49:49:1795:0:0:0,-10,-10 0/0:76.8486:22:22:789:0:0:0,-6.62266,-10 0/0:79.8589:23:23:843:0:0:0,-6.92369,-10 0/0:55.7765:15:15:528:0:0:0,-4.51545,-10 0/0:22.6632:4:4:152:0:0:0,-1.20412,-10 0/0:46.7456:12:12:449:0:0:0,-3.61236,-10 0/0:99:55:55:2020:0:0:0,-10,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:99:33:33:1173:0:0:0,-9.93399,-10 0/0:99:31:31:1111:0:0:0,-9.33193,-10 0/0:97.9188:29:29:1082:0:0:0,-8.72987,-10 0/0:22.6632:4:4:152:0:0:0,-1.20412,-10 0/0:91.8997:27:27:987:0:0:0,-8.12781,-10 0/0:58.7868:16:16:597:0:0:0,-4.81648,-10 0/0:25.6735:5:5:189:0:0:0,-1.50515,-10 0/0:70.828:20:20:689:0:0:0,-6.0206,-10 0/0:91.8997:27:27:954:0:0:0,-8.12781,-10 0/0:76.8486:22:22:802:0:0:0,-6.62266,-10 scaffold_285 675108 . G A 1156.94 . AB=0.394495;ABP=13.5489;AC=3;AF=0.0163043;AN=184;AO=45;CIGAR=1X;DP=2161;DPB=2161;DPRA=1.43838;EPP=4.21667;EPPR=3.99883;GTI=0;LEN=1;MEANALT=1.2;MQM=60;MQMR=59.9526;NS=92;NUMALT=1;ODDS=6.22535;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1683;QR=77036;RO=2111;RPP=100.727;RPPR=4586.99;RUN=1;SAF=20;SAP=4.21667;SAR=25;SRF=1071;SRP=3.99883;SRR=1040;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:51.1606:11:11:387:0:0:0,-3.31133,-10 0/0:42.1297:8:8:301:0:0:0,-2.40824,-10 0/0:60.1915:14:14:519:0:0:0,-4.21442,-10 0/0:54.1709:12:12:453:0:0:0,-3.61236,-10 0/0:48.1503:10:10:376:0:0:0,-3.0103,-10 0/0:33.0988:5:5:190:0:0:0,-1.50515,-10 0/0:99:55:55:2034:0:0:0,-10,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/0:72.2327:19:18:680:0:0:0,-5.41854,-10 0/0:27.0782:3:3:114:0:0:0,-0.90309,-10 0/0:39.1194:7:7:264:0:0:0,-2.10721,-10 0/0:27.0782:3:3:92:0:0:0,-0.90309,-8.58667 0/0:99:35:35:1294:0:0:0,-10,-10 0/0:99:39:39:1404:0:0:0,-10,-10 0/0:99:29:29:1079:0:0:0,-8.72987,-10 0/0:99:31:31:1155:0:0:0,-9.33193,-10 0/0:96.3135:26:26:971:0:0:0,-7.82678,-10 0/0:42.1297:8:8:302:0:0:0,-2.40824,-10 0/0:99:39:39:1416:0:0:0,-10,-10 0/0:99:58:58:2084:0:0:0,-10,-10 0/0:99:32:32:1164:0:0:0,-9.63296,-10 0/0:99:30:30:1073:0:0:0,-9.0309,-10 0/0:54.1709:12:12:418:0:0:0,-3.61236,-10 0/0:72.2327:18:18:636:0:0:0,-5.41854,-10 0/0:96.3135:27:26:952:0:0:0,-7.82678,-10 0/0:96.3135:27:26:933:0:0:0,-7.82678,-10 0/0:75.243:19:19:681:0:0:0,-5.71957,-10 0/0:63.2018:15:15:522:0:0:0,-4.51545,-10 0/0:93.304:25:25:901:0:0:0,-7.52575,-10 0/0:99:59:59:2067:0:0:0,-10,-10 0/0:33.0988:5:5:188:0:0:0,-1.50515,-10 0/0:30.0885:4:4:124:0:0:0,-1.20412,-10 0/0:81.2636:21:21:793:0:0:0,-6.32163,-10 0/0:78.2533:20:20:758:0:0:0,-6.0206,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:51.1606:11:11:414:0:0:0,-3.31133,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:93.304:25:25:885:0:0:0,-7.52575,-10 0/0:78.2533:20:20:751:0:0:0,-6.0206,-10 0/0:54.1709:12:12:405:0:0:0,-3.61236,-10 0/0:69.0504:33:32:1158:1:37:0,-4.71548,-10 0/0:75.243:19:19:708:0:0:0,-5.71957,-10 0/0:99:29:29:1023:0:0:0,-8.72987,-10 0/0:99:36:36:1317:0:0:0,-10,-10 0/0:99:33:33:1181:0:0:0,-9.93399,-10 0/1:99:22:10:377:11:417:-10,0,-10 0/1:99:46:32:1179:14:531:-10,0,-10 0/0:99:31:31:1145:0:0:0,-9.33193,-10 0/0:84.2738:22:22:794:0:0:0,-6.62266,-10 0/0:99:63:63:2304:0:0:0,-10,-10 0/0:45.14:9:9:342:0:0:0,-2.70927,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 0/0:60.1915:14:14:511:0:0:0,-4.21442,-10 0/0:36.1091:6:6:206:0:0:0,-1.80618,-10 0/1:99:41:23:839:18:660:-10,0,-10 0/0:87.284:23:23:857:0:0:0,-6.92369,-10 0/0:87.284:23:23:859:0:0:0,-6.92369,-10 0/0:48.1503:10:10:336:0:0:0,-3.0103,-10 0/0:81.2636:21:21:747:0:0:0,-6.32163,-10 0/0:63.2018:15:15:536:0:0:0,-4.51545,-10 0/0:99:45:45:1612:0:0:0,-10,-10 0/0:87.284:23:23:808:0:0:0,-6.92369,-10 0/0:99:46:46:1718:0:0:0,-10,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:60.1915:14:14:506:0:0:0,-4.21442,-10 0/0:99:35:35:1248:0:0:0,-10,-10 0/0:63.2018:16:15:542:0:0:0,-4.51545,-10 0/0:54.1709:12:12:450:0:0:0,-3.61236,-10 0/0:99:55:55:2072:0:0:0,-10,-10 0/0:66.2121:16:16:602:0:0:0,-4.81648,-10 0/0:37.577:23:22:806:1:38:0,-1.76196,-10 0/0:96.3135:26:26:961:0:0:0,-7.82678,-10 0/0:75.243:19:19:722:0:0:0,-5.71957,-10 0/0:84.2738:22:22:802:0:0:0,-6.62266,-10 0/0:99:41:41:1477:0:0:0,-10,-10 0/0:66.2121:16:16:568:0:0:0,-4.81648,-10 0/0:66.2121:16:16:579:0:0:0,-4.81648,-10 0/0:63.2018:15:15:551:0:0:0,-4.51545,-10 0/0:48.1503:10:10:372:0:0:0,-3.0103,-10 0/0:69.2224:17:17:646:0:0:0,-5.11751,-10 0/0:99:40:40:1465:0:0:0,-10,-10 0/0:99:29:29:1048:0:0:0,-8.72987,-10 0/0:99:30:30:1089:0:0:0,-9.0309,-10 0/0:99:31:31:1151:0:0:0,-9.33193,-10 0/0:99:34:34:1240:0:0:0,-10,-10 0/0:27.0782:3:3:114:0:0:0,-0.90309,-10 0/0:63.2018:15:15:534:0:0:0,-4.51545,-10 0/0:63.2018:15:15:557:0:0:0,-4.51545,-10 0/0:30.0885:4:4:152:0:0:0,-1.20412,-10 0/0:84.2738:22:22:817:0:0:0,-6.62266,-10 0/0:78.2533:20:20:756:0:0:0,-6.0206,-10 0/0:63.2018:15:15:566:0:0:0,-4.51545,-10 scaffold_285 696519 . T C 3309.23 . AB=0.48;ABP=3.53145;AC=8;AF=0.0434783;AN=184;AO=124;CIGAR=1X;DP=2691;DPB=2691;DPRA=1.16948;EPP=3.08035;EPPR=14.7935;GTI=0;LEN=1;MEANALT=1;MQM=54.0081;MQMR=59.9501;NS=92;NUMALT=1;ODDS=0.325112;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4467;QR=94231;RO=2566;RPP=272.273;RPPR=5575.01;RUN=1;SAF=63;SAP=3.08035;SAR=61;SRF=1342;SRP=14.7935;SRR=1224;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:64.6048:18:18:681:0:0:0,-5.41854,-10 0/0:58.5842:16:16:596:0:0:0,-4.81648,-10 0/0:99:42:42:1553:0:0:0,-10,-10 0/0:88.6864:26:26:959:0:0:0,-7.82678,-10 0/0:64.6048:18:18:652:0:0:0,-5.41854,-10 0/0:64.6048:18:18:669:0:0:0,-5.41854,-10 0/0:99:59:59:2186:0:0:0,-10,-10 0/0:99:44:44:1664:0:0:0,-10,-10 0/0:52.5636:14:14:525:0:0:0,-4.21442,-10 0/0:40.5224:10:10:366:0:0:0,-3.0103,-10 0/0:37.5121:9:9:320:0:0:0,-2.70927,-10 0/0:70.6254:20:20:744:0:0:0,-6.0206,-10 0/1:99:37:19:711:18:678:-10,0,-10 0/0:99:47:47:1713:0:0:0,-10,-10 0/0:99:46:46:1692:0:0:0,-10,-10 0/0:99:42:42:1530:0:0:0,-10,-10 0/0:99:34:34:1255:0:0:0,-10,-10 0/0:40.5224:10:10:380:0:0:0,-3.0103,-10 0/0:99:31:31:1163:0:0:0,-9.33193,-10 0/0:99:60:60:2112:0:0:0,-10,-10 0/0:73.6357:21:21:786:0:0:0,-6.32163,-10 0/0:99:58:58:2144:0:0:0,-10,-10 0/0:76.646:22:22:829:0:0:0,-6.62266,-10 0/0:99:35:35:1288:0:0:0,-10,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/1:99:23:14:529:9:315:-10,0,-10 0/0:79.6562:23:23:816:0:0:0,-6.92369,-10 0/0:85.6769:25:25:920:0:0:0,-7.52575,-10 0/0:94.7075:28:28:1037:0:0:0,-8.42884,-10 0/0:99:39:39:1431:0:0:0,-10,-10 0/0:46.543:12:12:431:0:0:0,-3.61236,-10 0/0:28.4812:6:6:227:0:0:0,-1.80618,-10 0/0:94.7075:28:28:1061:0:0:0,-8.42884,-10 0/0:67.6151:19:19:718:0:0:0,-5.71957,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:13.4297:1:1:38:0:0:0,-0.30103,-3.8 0/0:40.5224:10:10:335:0:0:0,-3.0103,-10 0/0:99:49:49:1783:0:0:0,-10,-10 0/0:70.6254:20:20:747:0:0:0,-6.0206,-10 0/0:99:34:34:1277:0:0:0,-10,-10 0/0:99:44:43:1581:0:0:0,-10,-10 0/0:79.6562:23:23:863:0:0:0,-6.92369,-10 0/0:94.7075:28:28:1023:0:0:0,-8.42884,-10 0/0:99:47:47:1709:0:0:0,-10,-10 0/1:99:29:13:492:16:567:-10,0,-10 0/0:94.7075:28:28:1033:0:0:0,-8.42884,-10 0/0:99:56:56:2035:0:0:0,-10,-10 0/0:99:35:35:1270:0:0:0,-10,-10 0/0:67.6151:19:19:713:0:0:0,-5.71957,-10 0/0:99:55:55:2045:0:0:0,-10,-10 0/0:58.5842:16:16:590:0:0:0,-4.81648,-10 0/0:99:49:49:1790:0:0:0,-10,-10 0/0:99:30:30:1042:0:0:0,-9.0309,-10 0/0:43.5327:11:11:405:0:0:0,-3.31133,-10 0/0:99:56:56:2079:0:0:0,-10,-10 1/1:3.99625:29:1:38:28:994:-10,-3.46747,0 0/0:99:34:34:1232:0:0:0,-10,-10 0/0:46.543:12:12:442:0:0:0,-3.61236,-10 0/0:67.6151:19:19:692:0:0:0,-5.71957,-10 0/0:31.4915:7:7:265:0:0:0,-2.10721,-10 0/0:99:31:31:1133:0:0:0,-9.33193,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/1:99:61:32:1115:29:1042:-10,0,-10 0/0:99:31:31:1174:0:0:0,-9.33193,-10 0/0:58.5842:16:16:603:0:0:0,-4.81648,-10 0/0:99:39:39:1419:0:0:0,-10,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:91.6959:27:27:950:0:0:0,-8.12781,-10 0/0:99:68:68:2492:0:0:0,-10,-10 0/0:79.6562:23:23:858:0:0:0,-6.92369,-10 0/0:97.7175:29:29:1072:0:0:0,-8.72987,-10 0/0:99:41:41:1511:0:0:0,-10,-10 0/0:85.6769:25:25:907:0:0:0,-7.52575,-10 0/0:70.6254:20:20:737:0:0:0,-6.0206,-10 0/0:82.6664:24:24:866:0:0:0,-7.22472,-10 0/0:55.5739:15:15:568:0:0:0,-4.51545,-10 0/0:91.6959:27:27:988:0:0:0,-8.12781,-10 0/0:82.6664:24:24:880:0:0:0,-7.22472,-10 0/0:46.543:12:12:426:0:0:0,-3.61236,-10 1/1:38.2044:24:0:0:24:871:-10,-7.22472,0 0/0:99:54:54:2000:0:0:0,-10,-10 0/0:99:33:33:1215:0:0:0,-9.93399,-10 0/0:99:41:41:1463:0:0:0,-10,-10 0/0:70.6254:20:20:756:0:0:0,-6.0206,-10 0/0:99:37:37:1399:0:0:0,-10,-10 0/0:34.5018:8:8:299:0:0:0,-2.40824,-10 0/0:79.6562:23:23:817:0:0:0,-6.92369,-10 0/0:73.6357:21:21:780:0:0:0,-6.32163,-10 0/0:28.4812:6:6:227:0:0:0,-1.80618,-10 0/0:99:37:37:1353:0:0:0,-10,-10 0/0:99:42:42:1528:0:0:0,-10,-10 0/0:88.6864:26:26:920:0:0:0,-7.82678,-10 scaffold_285 719910 . A T 5665.71 . AB=0.51004;ABP=3.22832;AC=23;AF=0.125;AN=184;AO=209;CIGAR=1X;DP=1436;DPB=1436;DPRA=1.29501;EPP=4.76618;EPPR=4.11639;GTI=2;LEN=1;MEANALT=1;MQM=59.7225;MQMR=59.9861;NS=92;NUMALT=1;ODDS=1.35006;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7664;QR=44922;RO=1227;RPP=456.848;RPPR=2667.41;RUN=1;SAF=111;SAP=4.76618;SAR=98;SRF=626;SRP=4.11639;SRR=601;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:23.5513:6:6:216:0:0:0,-1.80618,-10 0/0:23.5513:6:6:223:0:0:0,-1.80618,-10 0/1:99:19:10:380:9:342:-10,0,-10 1/1:21.8241:12:0:0:12:450:-10,-3.61236,0 0/0:17.5307:4:4:152:0:0:0,-1.20412,-10 0/0:29.5719:8:8:296:0:0:0,-2.40824,-10 0/0:80.7469:25:25:849:0:0:0,-7.52575,-10 0/0:50.644:15:15:559:0:0:0,-4.51545,-10 0/0:26.5616:7:7:266:0:0:0,-2.10721,-10 0/1:0.351916:4:0:0:4:150:-10,-1.20412,0 0/1:0.734884:5:0:0:5:190:-10,-1.50515,0 0/0:23.5513:6:6:226:0:0:0,-1.80618,-10 0/0:92.787:29:29:1095:0:0:0,-8.72987,-10 0/1:99:35:20:747:15:548:-10,0,-10 0/0:74.7264:23:23:862:0:0:0,-6.92369,-10 0/0:59.6749:18:18:656:0:0:0,-5.41854,-10 0/0:53.6543:16:16:600:0:0:0,-4.81648,-10 0/0:41.6131:12:12:440:0:0:0,-3.61236,-10 0/0:59.6749:18:18:648:0:0:0,-5.41854,-10 0/1:99:42:28:1023:14:522:-10,0,-10 0/1:99:13:7:263:6:228:-10,0,-10 0/0:86.7673:27:27:1014:0:0:0,-8.12781,-10 0/0:29.5719:8:8:302:0:0:0,-2.40824,-10 0/0:38.6028:11:11:418:0:0:0,-3.31133,-10 0/0:47.6337:14:14:523:0:0:0,-4.21442,-10 0/0:95.796:30:30:1109:0:0:0,-9.0309,-10 0/0:53.6543:16:16:603:0:0:0,-4.81648,-10 0/0:32.5822:9:9:329:0:0:0,-2.70927,-10 0/0:56.6646:17:17:622:0:0:0,-5.11751,-10 0/0:86.7673:27:27:984:0:0:0,-8.12781,-10 0/0:14.5204:3:3:113:0:0:0,-0.90309,-10 0/0:44.6234:13:13:470:0:0:0,-3.91339,-10 1/1:33.8653:16:0:0:16:602:-10,-4.81648,0 1/1:15.8035:10:0:0:10:378:-10,-3.0103,0 0/0:44.6234:13:13:468:0:0:0,-3.91339,-10 0/0:17.5307:4:4:152:0:0:0,-1.20412,-10 0/0:29.5719:8:8:303:0:0:0,-2.40824,-10 1/1:60.958:25:0:0:25:928:-10,-7.52575,0 0/0:29.5719:8:8:258:0:0:0,-2.40824,-10 0/1:99:10:4:145:6:226:-10,0,-10 0/0:62.6852:19:19:688:0:0:0,-5.71957,-10 0/0:53.6543:16:16:606:0:0:0,-4.81648,-10 1/1:39.8859:18:0:0:18:596:-10,-5.41854,0 0/1:99:23:9:341:14:521:-10,0,-10 0/0:59.6749:18:18:682:0:0:0,-5.41854,-10 0/0:50.644:15:15:537:0:0:0,-4.51545,-10 0/0:99:36:36:1335:0:0:0,-10,-10 0/0:68.7058:21:21:772:0:0:0,-6.32163,-10 0/0:35.5925:10:10:339:0:0:0,-3.0103,-10 0/1:99:29:11:417:18:680:-10,0,-10 0/0:65.6955:20:20:748:0:0:0,-6.0206,-10 0/0:75.778:32:31:1086:1:15:0,-6.62781,-10 0/0:41.6131:12:12:428:0:0:0,-3.61236,-10 0/0:17.5307:4:4:152:0:0:0,-1.20412,-10 0/1:99:38:20:752:18:653:-10,0,-10 0/0:47.6337:14:14:511:0:0:0,-4.21442,-10 0/0:62.6852:19:19:660:0:0:0,-5.71957,-10 0/0:20.541:5:5:187:0:0:0,-1.50515,-10 0/0:50.644:15:15:558:0:0:0,-4.51545,-10 0/0:23.5513:6:6:203:0:0:0,-1.80618,-10 0/0:71.7161:22:22:768:0:0:0,-6.62266,-10 0/0:35.5925:10:10:379:0:0:0,-3.0103,-10 0/0:74.7264:23:23:833:0:0:0,-6.92369,-10 0/0:56.6646:17:17:640:0:0:0,-5.11751,-10 0/0:47.6337:14:14:523:0:0:0,-4.21442,-10 0/0:50.644:15:15:547:0:0:0,-4.51545,-10 0/0:47.6337:14:14:507:0:0:0,-4.21442,-10 0/0:35.5925:10:10:379:0:0:0,-3.0103,-10 0/0:99:34:34:1277:0:0:0,-10,-10 0/0:32.5822:9:9:270:0:0:0,-2.70927,-10 0/0:35.5925:10:10:379:0:0:0,-3.0103,-10 0/0:68.7058:21:21:748:0:0:0,-6.32163,-10 0/0:59.6749:18:18:676:0:0:0,-5.41854,-10 0/0:41.6131:12:12:440:0:0:0,-3.61236,-10 0/0:83.7571:26:26:939:0:0:0,-7.82678,-10 0/0:44.6234:13:13:460:0:0:0,-3.91339,-10 0/0:38.6028:11:11:392:0:0:0,-3.31133,-10 0/0:29.5719:8:8:299:0:0:0,-2.40824,-10 0/0:26.5616:7:7:266:0:0:0,-2.10721,-10 0/0:53.6543:16:16:564:0:0:0,-4.81648,-10 0/0:71.7161:22:22:807:0:0:0,-6.62266,-10 0/0:56.6646:17:17:608:0:0:0,-5.11751,-10 0/0:65.6955:20:20:738:0:0:0,-6.0206,-10 0/0:59.6749:18:18:656:0:0:0,-5.41854,-10 0/0:71.7161:22:22:760:0:0:0,-6.62266,-10 0/0:26.5616:7:7:263:0:0:0,-2.10721,-10 0/0:35.5925:10:10:355:0:0:0,-3.0103,-10 0/0:35.5925:10:10:374:0:0:0,-3.0103,-10 0/1:59.3513:6:4:152:2:76:-6.58991,0,-10 0/1:99:13:6:228:7:242:-10,0,-10 0/1:99:12:3:114:9:317:-10,0,-9.37006 0/0:26.5616:7:7:265:0:0:0,-2.10721,-10 scaffold_285 719965 . C A 9336.08 . AB=0.424419;ABP=20.0791;AC=42;AF=0.228261;AN=184;AO=333;CIGAR=1X;DP=1442;DPB=1442;DPRA=1.26625;EPP=5.88603;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9468;NS=92;NUMALT=1;ODDS=0.294909;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=12354;QR=40820;RO=1108;RPP=708.843;RPPR=2340.02;RUN=1;SAF=175;SAP=4.89485;SAR=158;SRF=546;SRP=3.51201;SRR=562;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:23.6318:6:6:219:0:0:0,-1.80618,-10 0/0:23.6318:6:6:221:0:0:0,-1.80618,-10 0/0:62.7657:19:19:669:0:0:0,-5.71957,-10 0/0:41.6936:12:12:446:0:0:0,-3.61236,-10 0/1:68.2437:4:2:71:2:76:-6.79403,0,-6.31903 0/0:32.6627:9:9:341:0:0:0,-2.70927,-10 0/0:80.8274:25:25:918:0:0:0,-7.52575,-10 0/0:50.7245:15:15:523:0:0:0,-4.51545,-10 0/0:26.6421:7:7:266:0:0:0,-2.10721,-10 0/0:17.6112:4:4:152:0:0:0,-1.20412,-10 0/0:20.6215:5:5:190:0:0:0,-1.50515,-10 0/0:23.6318:6:6:206:0:0:0,-1.80618,-10 0/0:92.8679:29:29:1059:0:0:0,-8.72987,-10 0/0:99:34:34:1287:0:0:0,-10,-10 0/1:99:23:14:524:9:341:-10,0,-10 0/0:59.7554:18:18:668:0:0:0,-5.41854,-10 0/1:99:16:5:163:11:396:-10,0,-10 0/0:41.6936:12:12:451:0:0:0,-3.61236,-10 0/1:99:18:8:282:10:370:-10,0,-10 0/0:99:43:43:1564:0:0:0,-10,-10 0/0:44.7039:13:13:494:0:0:0,-3.91339,-10 0/1:99:26:11:417:15:564:-10,0,-10 0/0:29.6524:8:8:303:0:0:0,-2.40824,-10 0/0:38.6833:11:11:418:0:0:0,-3.31133,-10 0/0:50.7245:15:15:534:0:0:0,-4.51545,-10 0/0:95.8774:30:30:1118:0:0:0,-9.0309,-10 1/1:33.2189:16:0:0:16:583:-10,-4.81648,0 0/0:35.673:10:10:356:0:0:0,-3.0103,-10 0/0:53.7348:16:16:602:0:0:0,-4.81648,-10 0/1:99:27:17:644:10:371:-10,0,-10 0/0:14.6009:3:3:114:0:0:0,-0.90309,-10 1/1:24.188:13:0:0:13:492:-10,-3.91339,0 0/0:50.7245:15:15:543:0:0:0,-4.51545,-10 0/0:35.673:10:10:380:0:0:0,-3.0103,-10 1/1:21.1777:12:0:0:12:450:-10,-3.61236,0 0/0:17.6112:4:4:152:0:0:0,-1.20412,-10 0/0:29.6524:8:8:304:0:0:0,-2.40824,-10 0/0:80.8274:25:25:926:0:0:0,-7.52575,-10 1/1:9.13653:8:0:0:8:295:-10,-2.40824,0 0/1:99:11:7:264:4:150:-10,0,-10 0/1:99:20:15:534:5:190:-10,0,-10 0/0:53.7348:16:16:601:0:0:0,-4.81648,-10 0/0:59.7554:19:18:627:0:0:0,-5.41854,-10 0/1:99:23:14:503:9:338:-10,0,-10 0/0:56.7451:17:17:634:0:0:0,-5.11751,-10 0/1:99:15:9:310:6:211:-10,0,-10 0/1:99:36:21:786:15:561:-10,0,-10 0/0:71.7966:22:22:827:0:0:0,-6.62266,-10 0/0:35.673:10:10:345:0:0:0,-3.0103,-10 0/0:92.8679:29:29:1092:0:0:0,-8.72987,-10 0/0:65.776:20:20:757:0:0:0,-6.0206,-10 0/1:99:31:19:681:12:428:-10,0,-10 1/1:24.188:13:0:0:13:491:-10,-3.91339,0 0/0:17.6112:4:4:152:0:0:0,-1.20412,-10 0/1:99:38:18:680:20:755:-10,0,-10 0/0:47.7142:14:14:525:0:0:0,-4.21442,-10 0/0:62.7657:19:19:705:0:0:0,-5.71957,-10 0/0:20.6215:5:5:190:0:0:0,-1.50515,-10 1/1:33.2189:16:0:0:16:604:-10,-4.81648,0 0/0:20.6215:5:5:190:0:0:0,-1.50515,-10 0/0:71.7966:22:22:806:0:0:0,-6.62266,-10 0/0:32.6627:9:9:341:0:0:0,-2.70927,-10 0/0:74.8069:23:23:869:0:0:0,-6.92369,-10 0/0:56.7451:17:17:618:0:0:0,-5.11751,-10 0/1:10.3266:14:13:484:1:38:-0.731708,0,-10 0/0:50.7245:15:15:568:0:0:0,-4.51545,-10 0/0:50.7245:15:15:547:0:0:0,-4.51545,-10 0/0:38.6833:11:11:406:0:0:0,-3.31133,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:29.6524:8:8:267:0:0:0,-2.40824,-10 1/1:15.1571:10:0:0:10:357:-10,-3.0103,0 1/1:57.3013:24:0:0:24:874:-10,-7.22472,0 1/1:42.2498:19:0:0:19:697:-10,-5.71957,0 1/1:21.1777:12:0:0:12:441:-10,-3.61236,0 1/1:63.3219:26:0:0:26:965:-10,-7.82678,0 0/0:44.7039:13:13:488:0:0:0,-3.91339,-10 1/1:18.1674:11:0:0:11:404:-10,-3.31133,0 0/0:29.6524:8:8:296:0:0:0,-2.40824,-10 1/1:6.12623:7:0:0:7:266:-10,-2.10721,0 0/0:50.7245:15:15:519:0:0:0,-4.51545,-10 0/1:99:22:16:585:6:228:-10,0,-10 0/0:59.7554:18:18:652:0:0:0,-5.41854,-10 0/1:99:20:9:340:11:418:-10,0,-10 0/0:56.7451:17:17:619:0:0:0,-5.11751,-10 0/0:71.7966:22:22:786:0:0:0,-6.62266,-10 0/0:26.6421:7:7:235:0:0:0,-2.10721,-10 0/0:35.673:10:10:376:0:0:0,-3.0103,-10 0/0:35.673:10:10:373:0:0:0,-3.0103,-10 0/0:23.6318:6:6:228:0:0:0,-1.80618,-10 0/0:44.7039:13:13:492:0:0:0,-3.91339,-10 0/0:41.6936:12:12:428:0:0:0,-3.61236,-10 0/0:26.6421:7:7:264:0:0:0,-2.10721,-10 scaffold_285 721164 . AGACATGGG A 8583.74 . AB=0.496933;ABP=3.03694;AC=30;AF=0.164835;AN=182;AO=360;CIGAR=1M8D9M;DP=1790;DPB=1653.06;DPRA=1.53875;EPP=4.96463;EPPR=7.02451;GTI=2;LEN=8;MEANALT=1.10526;MQM=34.0528;MQMR=60;NS=91;NUMALT=1;ODDS=0.381015;PAIRED=0;PAIREDR=0;PAO=14;PQA=495.5;PQR=609;PRO=17;QA=11529;QR=50731;RO=1407;RPP=776.079;RPPR=2920.88;RUN=1;SAF=190;SAP=5.42305;SAR=170;SRF=694;SRP=3.56744;SRR=713;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:46.3692:16:16:582:0:0:0,-4.81648,-10 0|0:37.3383:13:13:481:0:0:0,-3.91339,-10 0|0:58.4104:20:20:716:0:0:0,-6.0206,-10 0|0:34.328:12:12:425:0:0:0,-3.61236,-10 0|1:91.6275:12:3:95:9:269:-10,0,-7.59673 0|0:34.328:12:12:438:0:0:0,-3.61236,-10 0|1:99:48:26:931:22:719:-10,0,-10 0|1:99:22:11:389:11:358:-10,0,-10 0|1:3.24378e-12:5:3:110:0:0:0,-0.90309,-9.958 0|1:0.748846:3:3:112:0:0:0,-0.90309,-10 0|0:28.3074:11:10:364:0:0:0,-3.0103,-10 0|0:22.2868:8:8:291:0:0:0,-2.40824,-10 0|0:85.5028:29:29:1029:0:0:0,-8.72987,-10 0|0:82.4926:28:28:1007:0:0:0,-8.42884,-10 0|1:99:32:17:607:14:475:-10,0,-10 0|0:79.4824:27:27:959:0:0:0,-8.12781,-10 0|1:99:25:15:540:10:316:-10,0,-10 0|0:37.3383:13:13:451:0:0:0,-3.91339,-10 0|0:73.4618:25:25:927:0:0:0,-7.52575,-10 0|0:99:35:34:1249:0:0:0,-10,-10 0|0:49.3795:18:17:603:0:0:0,-5.11751,-10 0|0:49.3795:18:17:617:0:0:0,-5.11751,-10 0|0:31.3177:12:11:400:0:0:0,-3.31133,-10 0|0:40.3486:14:14:509:0:0:0,-4.21442,-10 0|0:64.431:22:22:792:0:0:0,-6.62266,-10 0|0:67.4413:24:23:818:0:0:0,-6.92369,-10 0|0:46.3692:16:16:572:0:0:0,-4.81648,-10 1|1:43.8171:17:0:0:17:484:-10,-5.11751,0 0|0:52.3898:18:18:663:0:0:0,-5.41854,-10 0|0:99:36:36:1318:0:0:0,-10,-10 0|0:10.2456:4:4:136:0:0:0,-1.20412,-10 0|0:13.2559:5:5:185:0:0:0,-1.50515,-10 0|0:43.3589:15:15:525:0:0:0,-4.51545,-10 0|0:22.2868:8:8:291:0:0:0,-2.40824,-10 0|0:49.3795:18:17:611:0:0:0,-5.11751,-10 0|0:13.2559:5:5:179:0:0:0,-1.50515,-10 0|0:31.3177:11:11:399:0:0:0,-3.31133,-10 0|0:67.4413:23:23:836:0:0:0,-6.92369,-10 1|1:70.9098:26:0:0:26:874:-10,-7.82678,0 0|0:34.328:12:12:434:0:0:0,-3.61236,-10 0|0:91.5227:32:31:1108:0:0:0,-9.33193,-10 0|0:52.3898:18:18:645:0:0:0,-5.41854,-10 0|0:37.3383:14:13:472:0:0:0,-3.91339,-10 0|0:99:40:39:1407:0:0:0,-10,-10 0|0:28.3074:10:10:365:0:0:0,-3.0103,-10 0|1:99:26:12:437:14:450:-10,0,-10 0|1:99:41:18:638:23:699:-10,0,-10 0|0:37.3383:13:13:463:0:0:0,-3.91339,-10 0|0:43.3589:15:15:544:0:0:0,-4.51545,-10 0|0:99:48:48:1733:0:0:0,-10,-10 0|0:58.4104:20:20:738:0:0:0,-6.0206,-10 0|0:99:39:38:1364:0:0:0,-10,-10 0|0:25.2971:9:9:333:0:0:0,-2.70927,-10 0|0:10.2456:4:4:150:0:0:0,-1.20412,-10 0|1:99:52:27:989:25:757:-10,0,-10 0|0:40.3486:14:14:509:0:0:0,-4.21442,-10 0|0:49.3795:17:17:610:0:0:0,-5.11751,-10 0|0:37.3383:14:13:464:0:0:0,-3.91339,-10 0|0:40.3486:14:14:489:0:0:0,-4.21442,-10 0|0:16.2662:6:6:221:0:0:0,-1.80618,-10 0|0:99:39:38:1378:0:0:0,-10,-10 0|0:55.4001:19:19:685:0:0:0,-5.71957,-10 0|0:99:37:36:1330:0:0:0,-10,-10 0|0:55.4001:19:19:643:0:0:0,-5.71957,-10 0|0:40.3486:14:14:497:0:0:0,-4.21442,-10 0|0:85.5028:29:29:1076:0:0:0,-8.72987,-10 0|0:46.3692:16:16:590:0:0:0,-4.81648,-10 0|0:19.2765:7:7:261:0:0:0,-2.10721,-10 0|0:99:34:34:1199:0:0:0,-10,-10 0|0:19.2765:7:7:248:0:0:0,-2.10721,-10 1|1:52.848:20:0:0:20:678:-10,-6.0206,0 1|1:99:40:0:0:39:1246:-10,-10,0 1|1:67.8995:25:0:0:25:799:-10,-7.52575,0 .:.:.:.:.:.:.:. 1|1:61.8789:23:0:0:23:773:-10,-6.92369,0 0|0:40.3486:14:14:512:0:0:0,-4.21442,-10 1|1:61.8789:23:0:0:23:755:-10,-6.92369,0 0|0:37.3383:15:13:460:0:0:0,-3.91339,-10 1|1:25.7553:11:0:0:11:368:-10,-3.31133,0 0|0:37.3383:13:13:469:0:0:0,-3.91339,-10 0|1:99:42:19:647:23:701:-10,0,-10 0|0:79.4824:27:27:986:0:0:0,-8.12781,-10 0|1:99:26:15:556:11:350:-10,0,-10 0|0:37.3383:14:13:481:0:0:0,-3.91339,-10 0|0:52.3898:18:18:643:0:0:0,-5.41854,-10 1|1:34.7862:14:0:0:14:458:-10,-4.21442,0 0|0:43.3589:16:15:544:0:0:0,-4.51545,-10 0|0:34.328:12:12:430:0:0:0,-3.61236,-10 0|0:10.2456:4:4:151:0:0:0,-1.20412,-10 0|0:52.3898:18:18:631:0:0:0,-5.41854,-10 0|0:46.3692:17:16:581:0:0:0,-4.81648,-10 0|0:37.3383:13:13:463:0:0:0,-3.91339,-10 scaffold_285 778950 . C T 710.913 . AB=0.7;ABP=16.9077;AC=2;AF=0.0108696;AN=184;AO=30;CIGAR=1X;DP=2116;DPB=2116;DPRA=0.977295;EPP=13.4334;EPPR=10.7093;GTI=1;LEN=1;MEANALT=1;MQM=59.0667;MQMR=59.9593;NS=92;NUMALT=1;ODDS=6.74701;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1084;QR=75063;RO=2086;RPP=68.1545;RPPR=4524.02;RUN=1;SAF=21;SAP=13.4334;SAR=9;SRF=999;SRP=11.0716;SRR=1087;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.4133:12:12:452:0:0:0,-3.61236,-10 0/0:50.3824:9:9:319:0:0:0,-2.70927,-10 0/0:89.5153:22:22:826:0:0:0,-6.62266,-10 0/0:68.4442:15:15:539:0:0:0,-4.51545,-10 0/0:53.3927:10:10:349:0:0:0,-3.0103,-10 0/1:0.000759641:12:0:0:12:449:-10,-3.61236,0 0/0:99:31:31:1170:0:0:0,-9.33193,-10 0/0:99:38:38:1290:0:0:0,-10,-10 0/0:65.4339:14:14:488:0:0:0,-4.21442,-10 0/0:47.3721:8:8:295:0:0:0,-2.40824,-10 0/0:50.3824:9:9:320:0:0:0,-2.70927,-10 0/0:62.4236:13:13:457:0:0:0,-3.91339,-10 0/0:99:40:40:1420:0:0:0,-10,-10 0/0:99:40:40:1416:0:0:0,-10,-10 0/0:99:35:35:1238:0:0:0,-10,-10 0/1:99:28:12:443:16:603:-10,0,-10 0/0:99:38:38:1356:0:0:0,-10,-10 0/0:74.4648:17:17:623:0:0:0,-5.11751,-10 0/0:95.5327:24:24:868:0:0:0,-7.22472,-10 0/0:99:44:44:1639:0:0:0,-10,-10 0/0:89.5153:22:22:791:0:0:0,-6.62266,-10 0/0:99:37:37:1318:0:0:0,-10,-10 0/0:68.4442:15:15:515:0:0:0,-4.51545,-10 0/0:95.5327:24:24:848:0:0:0,-7.22472,-10 0/0:80.4854:19:19:722:0:0:0,-5.71957,-10 0/0:99:33:33:1176:0:0:0,-9.93399,-10 0/0:92.5245:23:23:839:0:0:0,-6.92369,-10 0/0:62.4236:13:13:449:0:0:0,-3.91339,-10 0/0:99:28:28:1000:0:0:0,-8.42884,-10 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:53.9738:18:17:622:1:16:0,-2.56327,-10 0/0:29.3103:2:2:76:0:0:0,-0.60206,-7.22 0/0:77.4751:18:18:665:0:0:0,-5.41854,-10 0/0:77.4751:18:18:667:0:0:0,-5.41854,-10 0/0:89.5153:22:22:828:0:0:0,-6.62266,-10 0/0:50.3824:9:9:341:0:0:0,-2.70927,-10 0/0:44.3618:7:7:238:0:0:0,-2.10721,-10 0/0:99:38:38:1388:0:0:0,-10,-10 0/0:95.5327:24:24:896:0:0:0,-7.22472,-10 0/0:77.4751:18:18:609:0:0:0,-5.41854,-10 0/0:99:44:44:1607:0:0:0,-10,-10 0/0:80.4854:19:19:672:0:0:0,-5.71957,-10 0/0:83.4957:20:20:742:0:0:0,-6.0206,-10 0/0:99:41:41:1459:0:0:0,-10,-10 0/0:93.6187:32:31:1091:1:16:0,-6.52781,-10 0/0:71.4545:16:16:595:0:0:0,-4.81648,-10 0/0:99:49:49:1802:0:0:0,-10,-10 0/0:99:37:37:1339:0:0:0,-10,-10 0/0:74.4648:17:17:604:0:0:0,-5.11751,-10 0/0:99:44:44:1578:0:0:0,-10,-10 0/0:86.5059:21:21:749:0:0:0,-6.32163,-10 0/0:99:54:54:1965:0:0:0,-10,-10 0/0:83.4957:20:20:672:0:0:0,-6.0206,-10 0/0:38.3412:5:5:162:0:0:0,-1.50515,-10 0/0:99:44:44:1600:0:0:0,-10,-10 0/0:62.4236:13:13:482:0:0:0,-3.91339,-10 0/0:71.4545:16:16:565:0:0:0,-4.81648,-10 0/0:50.3824:9:9:317:0:0:0,-2.70927,-10 0/0:74.4648:17:17:595:0:0:0,-5.11751,-10 0/0:68.4442:15:15:555:0:0:0,-4.51545,-10 0/0:99:42:42:1509:0:0:0,-10,-10 0/0:71.4545:16:16:567:0:0:0,-4.81648,-10 0/0:99:30:30:1038:0:0:0,-9.0309,-10 0/0:80.4854:19:19:706:0:0:0,-5.71957,-10 0/0:50.3824:9:9:317:0:0:0,-2.70927,-10 0/0:99:38:38:1404:0:0:0,-10,-10 0/0:80.4854:19:19:650:0:0:0,-5.71957,-10 0/0:53.3927:10:10:368:0:0:0,-3.0103,-10 0/0:99:47:47:1731:0:0:0,-10,-10 0/0:59.4133:12:12:415:0:0:0,-3.61236,-10 0/0:83.4957:20:20:728:0:0:0,-6.0206,-10 0/0:99:27:27:967:0:0:0,-8.12781,-10 0/0:77.4751:18:18:647:0:0:0,-5.41854,-10 0/0:83.4957:20:20:708:0:0:0,-6.0206,-10 0/0:99:40:40:1440:0:0:0,-10,-10 0/0:47.3721:8:8:258:0:0:0,-2.40824,-10 0/0:74.4648:17:17:597:0:0:0,-5.11751,-10 0/0:86.5059:21:21:773:0:0:0,-6.32163,-10 0/0:35.3309:4:4:145:0:0:0,-1.20412,-10 0/0:56.403:11:11:400:0:0:0,-3.31133,-10 0/0:99:42:42:1477:0:0:0,-10,-10 0/0:99:38:38:1337:0:0:0,-10,-10 0/0:99:38:38:1329:0:0:0,-10,-10 0/0:95.5327:24:24:870:0:0:0,-7.22472,-10 0/0:99:27:27:970:0:0:0,-8.12781,-10 0/0:50.3824:9:9:297:0:0:0,-2.70927,-10 0/0:68.4442:15:15:569:0:0:0,-4.51545,-10 0/0:71.4545:16:16:555:0:0:0,-4.81648,-10 0/0:56.403:11:11:408:0:0:0,-3.31133,-10 0/0:77.4751:18:18:653:0:0:0,-5.41854,-10 0/0:89.5153:22:22:804:0:0:0,-6.62266,-10 0/0:71.4545:16:16:604:0:0:0,-4.81648,-10 scaffold_285 782605 . C A 41168.9 . AB=0.447674;ABP=7.10075;AC=172;AF=0.934783;AN=184;AO=1375;CIGAR=1X;DP=1508;DPB=1508;DPRA=1.06778;EPP=4.33845;EPPR=4.65535;GTI=1;LEN=1;MEANALT=1.01124;MQM=59.9564;MQMR=60;NS=92;NUMALT=1;ODDS=3.06449;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=50350;QR=4863;RO=132;RPP=2936.9;RPPR=272.536;RUN=1;SAF=667;SAP=5.66502;SAR=708;SRF=69;SRP=3.60252;SRR=63;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:35.0498:9:0:0:9:330:-10,-2.70927,0 1/1:44.0807:12:0:0:12:406:-10,-3.61236,0 1/1:56.1219:16:0:0:16:605:-10,-4.81648,0 1/1:38.0601:10:0:0:10:370:-10,-3.0103,0 1/1:38.0601:10:0:0:10:373:-10,-3.0103,0 0/0:18.1683:11:11:408:0:0:0,-3.31133,-10 0/1:99:29:15:560:14:532:-10,0,-10 1/1:86.225:26:0:0:26:964:-10,-7.82678,0 1/1:41.0704:11:0:0:11:394:-10,-3.31133,0 1/1:13.9777:2:0:0:2:76:-7.22,-0.60206,0 1/1:26.0189:6:0:0:6:228:-10,-1.80618,0 1/1:19.9983:4:0:0:4:152:-10,-1.20412,0 1/1:64.2195:27:1:15:26:972:-10,-5.19645,0 1/1:83.2145:25:0:0:25:892:-10,-7.52575,0 1/1:99:33:0:0:33:1218:-10,-9.93399,0 0/1:99:23:14:518:9:342:-10,0,-10 1/1:65.1528:19:0:0:19:661:-10,-5.71957,0 1/1:26.0189:6:0:0:6:221:-10,-1.80618,0 1/1:53.1116:15:0:0:15:524:-10,-4.51545,0 0/1:99:31:18:669:13:464:-10,0,-10 0/1:99:19:10:355:9:340:-10,0,-10 1/1:80.2044:24:0:0:24:883:-10,-7.22472,0 0/1:0.0702798:4:4:149:0:0:0,-1.20412,-10 1/1:71.1735:21:0:0:21:732:-10,-6.32163,0 1/1:74.1838:22:0:0:22:771:-10,-6.62266,0 1/1:71.1735:21:0:0:21:753:-10,-6.32163,0 1/1:53.1116:15:0:0:15:502:-10,-4.51545,0 1/1:53.1116:15:0:0:15:570:-10,-4.51545,0 1/1:50.1013:14:0:0:14:532:-10,-4.21442,0 1/1:86.225:26:0:0:26:986:-10,-7.82678,0 1/1:26.0189:6:0:0:6:214:-10,-1.80618,0 1/1:26.0189:6:0:0:6:227:-10,-1.80618,0 1/1:41.0704:11:0:0:11:411:-10,-3.31133,0 1/1:41.0704:11:0:0:11:393:-10,-3.31133,0 1/1:80.2044:24:0:0:24:879:-10,-7.22472,0 1/1:29.0292:7:0:0:7:264:-10,-2.10721,0 1/1:29.0292:7:0:0:7:266:-10,-2.10721,0 0/1:99:17:10:375:7:240:-10,0,-10 1/1:35.0498:9:0:0:9:337:-10,-2.70927,0 1/1:32.0395:8:0:0:8:277:-10,-2.40824,0 1/1:71.1735:21:0:0:21:778:-10,-6.32163,0 1/1:50.1013:14:0:0:14:518:-10,-4.21442,0 1/1:65.1528:19:0:0:19:678:-10,-5.71957,0 1/1:99:32:0:0:32:1154:-10,-9.63296,0 1/1:53.1116:15:0:0:15:560:-10,-4.51545,0 1/1:53.1116:15:0:0:15:555:-10,-4.51545,0 1/1:86.225:26:0:0:26:951:-10,-7.82678,0 1/1:92.244:28:0:0:28:1054:-10,-8.42884,0 1/1:56.1219:16:0:0:16:575:-10,-4.81648,0 1/1:71.1735:21:0:0:21:759:-10,-6.32163,0 1/1:26.0189:6:0:0:6:225:-10,-1.80618,0 1/1:77.1941:23:0:0:23:874:-10,-6.92369,0 1/1:47.091:13:0:0:13:474:-10,-3.91339,0 1/1:23.0086:5:0:0:5:190:-10,-1.50515,0 1/1:99:36:0:0:36:1295:-10,-10,0 1/1:29.0292:7:0:0:7:257:-10,-2.10721,0 1/1:27.0575:22:1:38:21:740:-10,-1.48024,0 1/1:26.0189:6:0:0:6:228:-10,-1.80618,0 1/1:68.1631:20:0:0:20:756:-10,-6.0206,0 1/1:53.1116:15:0:0:15:550:-10,-4.51545,0 1/1:89.2353:27:0:0:27:1008:-10,-8.12781,0 1/1:47.091:13:0:0:13:462:-10,-3.91339,0 1/1:99:32:0:0:32:1145:-10,-9.63296,0 1/1:53.1116:15:0:0:15:517:-10,-4.51545,0 1/1:29.0292:7:0:0:7:265:-10,-2.10721,0 0/1:99:27:14:515:13:482:-10,0,-10 1/1:44.0807:12:0:0:12:448:-10,-3.61236,0 1/1:32.0395:8:0:0:8:304:-10,-2.40824,0 1/1:95.2528:29:0:0:29:1099:-10,-8.72987,0 1/1:32.0395:8:0:0:8:280:-10,-2.40824,0 1/1:65.1528:19:0:0:19:628:-10,-5.71957,0 1/1:99:33:0:0:33:1226:-10,-9.93399,0 1/1:56.1219:17:0:0:16:603:-10,-4.81648,0 1/1:56.1219:16:0:0:16:599:-10,-4.81648,0 1/1:47.091:13:0:0:13:487:-10,-3.91339,0 1/1:50.1013:14:0:0:14:527:-10,-4.21442,0 1/1:68.1631:20:0:0:20:727:-10,-6.0206,0 1/1:32.0395:8:0:0:8:301:-10,-2.40824,0 1/1:23.0086:5:0:0:5:189:-10,-1.50515,0 1/1:38.0601:10:0:0:10:352:-10,-3.0103,0 1/1:89.2353:27:0:0:27:1017:-10,-8.12781,0 1/1:62.1425:18:0:0:18:683:-10,-5.41854,0 1/1:74.1838:22:0:0:22:784:-10,-6.62266,0 0/1:99:26:14:506:12:432:-10,0,-10 1/1:89.2353:27:0:0:27:1015:-10,-8.12781,0 1/1:16.988:3:0:0:3:114:-10,-0.90309,0 0/0:45.261:20:20:755:0:0:0,-6.0206,-10 1/1:56.1219:16:0:0:16:582:-10,-4.81648,0 1/1:23.0086:5:0:0:5:190:-10,-1.50515,0 1/1:44.0807:12:0:0:12:449:-10,-3.61236,0 1/1:62.1425:18:0:0:18:625:-10,-5.41854,0 1/1:35.0498:9:0:0:9:338:-10,-2.70927,0 scaffold_285 782620 . C T 387.848 . AB=0.62963;ABP=6.95112;AC=2;AF=0.0108696;AN=184;AO=17;CIGAR=1X;DP=1496;DPB=1496;DPRA=0.827093;EPP=4.1599;EPPR=6.39533;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9594;NS=92;NUMALT=1;ODDS=7.85726;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=624;QR=54009;RO=1478;RPP=39.9253;RPPR=3212.45;RUN=1;SAF=10;SAP=4.1599;SAR=7;SRF=715;SRP=6.39533;SRR=763;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.2011:9:9:319:0:0:0,-2.70927,-10 0/0:64.232:12:12:407:0:0:0,-3.61236,-10 0/0:76.2731:16:16:586:0:0:0,-4.81648,-10 0/0:58.2114:10:10:380:0:0:0,-3.0103,-10 0/0:58.2114:10:10:358:0:0:0,-3.0103,-10 0/0:61.2216:11:11:391:0:0:0,-3.31133,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:99:26:26:902:0:0:0,-7.82678,-10 0/0:61.2216:11:11:400:0:0:0,-3.31133,-10 0/0:34.129:2:2:76:0:0:0,-0.60206,-7.22 0/0:46.1702:6:6:228:0:0:0,-1.80618,-10 0/0:40.1496:4:4:150:0:0:0,-1.20412,-10 0/0:99:27:27:1010:0:0:0,-8.12781,-10 0/0:99:25:25:943:0:0:0,-7.52575,-10 0/0:99:33:33:1188:0:0:0,-9.93399,-10 0/0:97.3448:23:23:827:0:0:0,-6.92369,-10 0/0:82.2937:18:18:665:0:0:0,-5.41854,-10 0/0:46.1702:6:6:203:0:0:0,-1.80618,-10 0/0:73.2628:15:15:525:0:0:0,-4.51545,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/1:99:18:10:368:8:304:-10,0,-10 0/0:99:24:24:855:0:0:0,-7.22472,-10 0/0:40.1496:4:4:152:0:0:0,-1.20412,-10 0/0:91.3245:21:21:782:0:0:0,-6.32163,-10 0/0:91.3245:21:21:725:0:0:0,-6.32163,-10 0/0:91.3245:21:21:771:0:0:0,-6.32163,-10 0/0:73.2628:15:15:538:0:0:0,-4.51545,-10 0/0:73.2628:15:15:563:0:0:0,-4.51545,-10 0/0:70.2525:14:14:523:0:0:0,-4.21442,-10 0/0:99:26:26:981:0:0:0,-7.82678,-10 0/0:46.1702:6:6:215:0:0:0,-1.80618,-10 0/0:46.1702:6:6:217:0:0:0,-1.80618,-10 0/0:61.2216:11:11:406:0:0:0,-3.31133,-10 0/0:61.2216:11:11:409:0:0:0,-3.31133,-10 0/0:99:24:24:887:0:0:0,-7.22472,-10 0/0:49.1805:7:7:266:0:0:0,-2.10721,-10 0/0:49.1805:7:7:264:0:0:0,-2.10721,-10 0/0:79.2834:17:17:627:0:0:0,-5.11751,-10 0/1:3.13053e-05:9:0:0:9:320:-10,-2.70927,0 0/0:49.1805:7:7:239:0:0:0,-2.10721,-10 0/0:91.3245:21:21:786:0:0:0,-6.32163,-10 0/0:70.2525:14:14:505:0:0:0,-4.21442,-10 0/0:85.304:19:19:684:0:0:0,-5.71957,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:73.2628:15:15:539:0:0:0,-4.51545,-10 0/0:73.2628:15:15:543:0:0:0,-4.51545,-10 0/0:99:25:25:909:0:0:0,-7.52575,-10 0/0:99:28:28:982:0:0:0,-8.42884,-10 0/0:76.2731:16:16:557:0:0:0,-4.81648,-10 0/0:91.3245:21:21:760:0:0:0,-6.32163,-10 0/0:46.1702:6:6:228:0:0:0,-1.80618,-10 0/0:97.3448:23:23:851:0:0:0,-6.92369,-10 0/0:67.2422:13:13:492:0:0:0,-3.91339,-10 0/0:40.1496:4:4:152:0:0:0,-1.20412,-10 0/0:99:36:36:1329:0:0:0,-10,-10 0/0:46.1702:7:6:227:0:0:0,-1.80618,-10 0/0:94.3347:22:22:816:0:0:0,-6.62266,-10 0/0:46.1702:6:6:198:0:0:0,-1.80618,-10 0/0:82.2937:18:18:664:0:0:0,-5.41854,-10 0/0:73.2628:15:15:562:0:0:0,-4.51545,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:64.232:12:12:425:0:0:0,-3.61236,-10 0/0:99:31:31:1129:0:0:0,-9.33193,-10 0/0:73.2628:15:15:540:0:0:0,-4.51545,-10 0/0:49.1805:7:7:242:0:0:0,-2.10721,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:64.232:12:12:438:0:0:0,-3.61236,-10 0/0:52.1908:8:8:300:0:0:0,-2.40824,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:52.1908:8:8:289:0:0:0,-2.40824,-10 0/0:85.304:19:19:687:0:0:0,-5.71957,-10 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:79.2834:17:17:639:0:0:0,-5.11751,-10 0/0:76.2731:16:16:583:0:0:0,-4.81648,-10 0/0:67.2422:13:13:476:0:0:0,-3.91339,-10 0/0:70.2525:14:14:526:0:0:0,-4.21442,-10 0/0:88.3143:20:20:714:0:0:0,-6.0206,-10 0/0:52.1908:8:8:301:0:0:0,-2.40824,-10 0/0:43.1599:5:5:166:0:0:0,-1.50515,-10 0/0:58.2114:10:10:371:0:0:0,-3.0103,-10 0/0:99:27:27:1010:0:0:0,-8.12781,-10 0/0:82.2937:18:18:643:0:0:0,-5.41854,-10 0/0:94.3347:22:22:787:0:0:0,-6.62266,-10 0/0:99:26:26:927:0:0:0,-7.82678,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 0/0:37.1393:3:3:114:0:0:0,-0.90309,-10 0/0:88.3143:20:20:752:0:0:0,-6.0206,-10 0/0:76.2731:16:16:579:0:0:0,-4.81648,-10 0/0:43.1599:5:5:185:0:0:0,-1.50515,-10 0/0:64.232:12:12:451:0:0:0,-3.61236,-10 0/0:82.2937:18:18:645:0:0:0,-5.41854,-10 0/0:55.2011:9:9:340:0:0:0,-2.70927,-10 scaffold_285 787528 . G A 13748.4 . AB=0.480583;ABP=4.35956;AC=49;AF=0.266304;AN=184;AO=491;CIGAR=1X;DP=1680;DPB=1680;DPRA=1.26667;EPP=3.75771;EPPR=4.15174;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9756;NS=92;NUMALT=1;ODDS=0.331645;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17949;QR=43535;RO=1189;RPP=1069.2;RPPR=2584.89;RUN=1;SAF=239;SAP=3.75771;SAR=252;SRF=582;SRP=4.15174;SRR=607;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:63.4715:21:21:740:0:0:0,-6.32163,-10 0/0:24.3376:8:8:281:0:0:0,-2.40824,-10 0/0:66.4818:22:22:833:0:0:0,-6.62266,-10 0/0:18.317:6:6:228:0:0:0,-1.80618,-10 0/0:21.3273:7:7:265:0:0:0,-2.10721,-10 0/0:33.3685:11:11:413:0:0:0,-3.31133,-10 0/1:99:30:14:467:16:584:-10,0,-10 0/1:99:18:8:303:10:376:-10,0,-10 0/0:33.3685:11:11:405:0:0:0,-3.31133,-10 0/0:15.3067:5:5:167:0:0:0,-1.50515,-10 0/0:30.3582:10:10:350:0:0:0,-3.0103,-10 0/0:21.3273:7:7:265:0:0:0,-2.10721,-10 0/1:99:39:25:942:14:488:-10,0,-10 0/1:99:30:20:708:10:340:-10,0,-10 0/0:43.7544:31:30:1108:1:38:0,-4.04057,-10 0/0:48.42:16:16:561:0:0:0,-4.81648,-10 0/1:99:27:19:721:8:304:-10,0,-10 1/1:32.2774:13:0:0:13:494:-10,-3.91339,0 0/1:99:16:9:340:7:261:-10,0,-10 0/1:99:28:13:493:15:544:-10,0,-10 0/1:99:11:7:256:4:152:-10,0,-10 0/0:75.5127:25:25:849:0:0:0,-7.52575,-10 0/0:24.3376:8:8:278:0:0:0,-2.40824,-10 0/0:57.4509:19:19:714:0:0:0,-5.71957,-10 0/0:60.4612:20:20:713:0:0:0,-6.0206,-10 0/0:72.5025:24:24:893:0:0:0,-7.22472,-10 0/0:69.4921:23:23:865:0:0:0,-6.92369,-10 0/0:48.42:16:16:559:0:0:0,-4.81648,-10 1/1:41.3083:16:0:0:16:541:-10,-4.81648,0 0/0:90.5632:30:30:1116:0:0:0,-9.0309,-10 0/0:12.2964:4:4:129:0:0:0,-1.20412,-10 0/0:45.4097:15:15:545:0:0:0,-4.51545,-10 0/0:30.3582:10:10:377:0:0:0,-3.0103,-10 0/0:42.3994:14:14:526:0:0:0,-4.21442,-10 1/1:50.3392:19:0:0:19:710:-10,-5.71957,0 0/1:1.30162:4:0:0:4:152:-10,-1.20412,0 1/1:29.2671:12:0:0:12:445:-10,-3.61236,0 0/0:45.4097:15:15:537:0:0:0,-4.51545,-10 0/0:33.3685:11:11:418:0:0:0,-3.31133,-10 0/1:99:12:4:142:8:301:-10,0,-10 0/1:99:21:8:302:13:471:-10,0,-10 0/0:60.4612:20:20:760:0:0:0,-6.0206,-10 0/0:48.42:16:16:606:0:0:0,-4.81648,-10 0/1:99:30:8:254:22:826:-10,0,-10 0/0:72.5025:24:24:889:0:0:0,-7.22472,-10 0/0:57.4509:19:19:696:0:0:0,-5.71957,-10 0/0:99:42:42:1553:0:0:0,-10,-10 0/1:99:23:11:399:12:408:-10,0,-10 0/0:48.42:16:16:596:0:0:0,-4.81648,-10 0/0:99:37:37:1293:0:0:0,-10,-10 0/0:30.3582:10:10:375:0:0:0,-3.0103,-10 0/0:99:34:34:1268:0:0:0,-10,-10 0/0:30.3582:10:10:335:0:0:0,-3.0103,-10 0/0:9.28615:3:3:114:0:0:0,-0.90309,-10 0/0:99:41:41:1528:0:0:0,-10,-10 0/0:48.42:16:16:579:0:0:0,-4.81648,-10 0/0:30.3582:10:10:372:0:0:0,-3.0103,-10 0/0:33.3685:11:11:390:0:0:0,-3.31133,-10 0/0:51.4303:17:17:618:0:0:0,-5.11751,-10 0/0:21.3273:7:7:243:0:0:0,-2.10721,-10 0/0:99:47:47:1708:0:0:0,-10,-10 0/0:48.42:16:16:603:0:0:0,-4.81648,-10 0/1:99:27:15:563:12:421:-10,0,-10 0/0:45.4097:15:15:554:0:0:0,-4.51545,-10 0/0:27.3479:9:9:333:0:0:0,-2.70927,-10 1/1:83.4523:30:0:0:30:1122:-10,-9.0309,0 0/0:57.4509:19:19:686:0:0:0,-5.71957,-10 1/1:23.2465:10:0:0:10:348:-10,-3.0103,0 0/0:96.5806:32:32:1215:0:0:0,-9.63296,-10 0/0:24.3376:8:8:298:0:0:0,-2.40824,-10 1/1:53.3495:20:0:0:20:756:-10,-6.0206,0 1/1:98.5045:35:0:0:35:1323:-10,-10,0 1/1:62.3804:23:0:0:23:805:-10,-6.92369,0 1/1:38.298:15:0:0:15:523:-10,-4.51545,0 1/1:56.3598:21:0:0:21:791:-10,-6.32163,0 0/0:36.3788:12:12:390:0:0:0,-3.61236,-10 0/0:36.3788:12:12:440:0:0:0,-3.61236,-10 1/1:65.3907:24:0:0:24:896:-10,-7.22472,0 1/1:14.2156:7:0:0:7:244:-10,-2.10721,0 0/0:36.3788:12:12:447:0:0:0,-3.61236,-10 0/1:99:36:27:996:9:339:-10,0,-10 0/0:78.523:26:26:940:0:0:0,-7.82678,-10 0/1:99:18:8:304:10:349:-10,0,-10 1/1:80.4421:29:0:0:29:1029:-10,-8.72987,0 0/0:45.4097:15:15:554:0:0:0,-4.51545,-10 0/0:24.3376:8:8:298:0:0:0,-2.40824,-10 0/0:45.4097:15:15:565:0:0:0,-4.51545,-10 0/0:24.3376:8:8:304:0:0:0,-2.40824,-10 0/1:0.290683:2:0:0:2:76:-7.22,-0.60206,0 0/1:99:17:6:220:11:411:-10,0,-10 0/1:99:23:12:440:11:414:-10,0,-10 1/1:47.3289:18:0:0:18:667:-10,-5.41854,0 scaffold_285 787576 . CT C 1136.26 . AB=0.727273;ABP=32.6213;AC=4;AF=0.0217391;AN=184;AO=48;CIGAR=1M1D1M;DP=1673;DPB=1658.33;DPRA=0.903547;EPP=3.19126;EPPR=7.67341;GTI=2;LEN=1;MEANALT=1.25;MQM=60;MQMR=59.992;NS=92;NUMALT=1;ODDS=0.428015;PAIRED=0;PAIREDR=0;PAO=1.5;PQA=44.5;PQR=44.5;PRO=1.5;QA=1688;QR=58839;RO=1621;RPP=107.241;RPPR=3522.97;RUN=1;SAF=23;SAP=3.19126;SAR=25;SRF=781;SRP=7.67341;SRR=840;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:74.9196:20:20:722:0:0:0,-6.0206,-10 0|0:38.796:8:8:282:0:0:0,-2.40824,-10 0|0:77.9299:22:21:784:0:0:0,-6.32163,-10 0|0:32.7754:6:6:206:0:0:0,-1.80618,-10 0|0:35.7857:7:7:258:0:0:0,-2.10721,-10 0|0:47.8269:11:11:402:0:0:0,-3.31133,-10 0|0:99:30:30:1091:0:0:0,-9.0309,-10 0|0:68.899:18:18:682:0:0:0,-5.41854,-10 0|0:47.8269:11:11:382:0:0:0,-3.31133,-10 0|0:29.7651:5:5:171:0:0:0,-1.50515,-10 0|0:44.8166:10:10:346:0:0:0,-3.0103,-10 0|0:35.7857:7:7:265:0:0:0,-2.10721,-10 0|0:99:39:39:1424:0:0:0,-10,-10 0|0:99:29:29:1033:0:0:0,-8.72987,-10 0|0:99:31:31:1141:0:0:0,-9.33193,-10 0|0:62.8784:16:16:580:0:0:0,-4.81648,-10 0|0:95.991:27:27:998:0:0:0,-8.12781,-10 0|0:53.8475:13:13:480:0:0:0,-3.91339,-10 0|1:99:17:9:321:7:234:-10,0,-10 0|0:99:28:28:1037:0:0:0,-8.42884,-10 0|0:47.8269:11:11:399:0:0:0,-3.31133,-10 0|0:92.9811:26:26:933:0:0:0,-7.82678,-10 0|0:38.796:8:8:294:0:0:0,-2.40824,-10 0|0:71.9093:19:19:699:0:0:0,-5.71957,-10 0|0:74.9196:20:20:709:0:0:0,-6.0206,-10 0|0:86.9607:24:24:884:0:0:0,-7.22472,-10 0|0:86.9607:24:24:867:0:0:0,-7.22472,-10 0|0:62.8784:16:16:556:0:0:0,-4.81648,-10 0|1:2.10452:17:0:0:17:608:-10,-5.11751,0 0|0:99:30:30:1078:0:0:0,-9.0309,-10 0|0:26.7548:4:4:143:0:0:0,-1.20412,-10 0|0:59.8681:15:15:549:0:0:0,-4.51545,-10 0|0:47.8269:11:11:402:0:0:0,-3.31133,-10 0|0:56.8578:14:14:514:0:0:0,-4.21442,-10 0|0:71.9093:19:19:682:0:0:0,-5.71957,-10 0|0:26.7548:4:4:150:0:0:0,-1.20412,-10 0|1:0.0261393:11:0:0:11:369:-10,-3.31133,0 0|0:56.8578:14:14:500:0:0:0,-4.21442,-10 0|0:47.8269:11:11:411:0:0:0,-3.31133,-10 0|0:50.8372:12:12:444:0:0:0,-3.61236,-10 0|1:99:21:8:301:13:477:-10,0,-10 0|0:74.9196:20:20:755:0:0:0,-6.0206,-10 0|0:62.8784:16:16:602:0:0:0,-4.81648,-10 0|0:99:30:30:1080:0:0:0,-9.0309,-10 0|0:83.9505:23:23:838:0:0:0,-6.92369,-10 0|0:71.9093:19:19:649:0:0:0,-5.71957,-10 0|0:99:42:42:1531:0:0:0,-10,-10 0|0:83.9505:23:23:794:0:0:0,-6.92369,-10 0|0:59.8681:15:15:519:0:0:0,-4.51545,-10 0|0:99:38:37:1318:0:0:0,-10,-10 0|0:44.8166:10:10:351:0:0:0,-3.0103,-10 0|0:99:33:33:1179:0:0:0,-9.93399,-10 0|0:47.8269:11:11:399:0:0:0,-3.31133,-10 0|0:23.7445:3:3:103:0:0:0,-0.90309,-9.61333 0|0:99:43:42:1516:0:0:0,-10,-10 0|0:62.8784:16:16:602:0:0:0,-4.81648,-10 0|0:44.8166:10:10:367:0:0:0,-3.0103,-10 0|0:47.8269:11:11:408:0:0:0,-3.31133,-10 0|0:65.8887:17:17:615:0:0:0,-5.11751,-10 0|0:35.7857:7:7:250:0:0:0,-2.10721,-10 0|0:99:47:47:1736:0:0:0,-10,-10 0|0:62.8784:16:16:599:0:0:0,-4.81648,-10 0|0:95.991:27:27:983:0:0:0,-8.12781,-10 0|0:59.8681:15:15:532:0:0:0,-4.51545,-10 0|0:35.7857:7:7:254:0:0:0,-2.10721,-10 0|0:99:28:28:1013:0:0:0,-8.42884,-10 0|0:68.899:18:18:664:0:0:0,-5.41854,-10 0|0:44.8166:10:10:364:0:0:0,-3.0103,-10 0|0:99:32:32:1177:0:0:0,-9.63296,-10 0|0:38.796:8:8:295:0:0:0,-2.40824,-10 0|0:74.9196:20:20:738:0:0:0,-6.0206,-10 0|0:99:35:35:1304:0:0:0,-10,-10 0|0:77.9299:21:21:728:0:0:0,-6.32163,-10 0|0:59.8681:15:15:560:0:0:0,-4.51545,-10 0|0:77.9299:21:21:760:0:0:0,-6.32163,-10 0|0:50.8372:12:12:431:0:0:0,-3.61236,-10 0|0:53.8475:13:13:487:0:0:0,-3.91339,-10 0|0:86.9607:24:24:868:0:0:0,-7.22472,-10 0|0:35.7857:7:7:251:0:0:0,-2.10721,-10 0|0:50.8372:12:12:429:0:0:0,-3.61236,-10 0|0:99:35:35:1276:0:0:0,-10,-10 0|0:89.9709:25:25:894:0:0:0,-7.52575,-10 0|0:68.899:18:18:659:0:0:0,-5.41854,-10 0|0:99:28:28:1031:0:0:0,-8.42884,-10 0|0:62.8784:16:16:583:0:0:0,-4.81648,-10 0|0:38.796:8:8:275:0:0:0,-2.40824,-10 0|0:59.8681:15:15:549:0:0:0,-4.51545,-10 0|0:38.796:8:8:302:0:0:0,-2.40824,-10 0|0:20.7342:2:2:76:0:0:0,-0.60206,-7.22 0|0:65.8887:17:17:627:0:0:0,-5.11751,-10 0|0:80.9401:22:22:769:0:0:0,-6.62266,-10 0|0:68.899:18:18:629:0:0:0,-5.41854,-10 scaffold_293 92721 . A C 37797.4 . AB=0.518919;ABP=4.16059;AC=118;AF=0.648352;AN=182;AO=1314;CIGAR=1X;DP=1968;DPB=1968;DPRA=1.23299;EPP=7.14172;EPPR=10.0576;GTI=3;LEN=1;MEANALT=1.03125;MQM=59.9992;MQMR=59.9985;NS=91;NUMALT=1;ODDS=0.0105376;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=47434;QR=23949;RO=652;RPP=2856.33;RPPR=1418.81;RUN=1;SAF=682;SAP=7.14172;SAR=632;SRF=349;SRP=10.0576;SRR=303;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:69.1064:22:0:0:22:780:-10,-6.62266,0 1/1:20.9416:6:0:0:6:211:-10,-1.80618,0 1/1:75.127:24:0:0:24:867:-10,-7.22472,0 1/1:45.024:14:0:0:14:517:-10,-4.21442,0 1/1:35.9931:11:0:0:11:401:-10,-3.31133,0 1/1:42.0137:13:0:0:13:464:-10,-3.91339,0 1/1:99:58:0:0:58:2125:-10,-10,0 1/1:99:33:0:0:32:1147:-10,-9.63296,0 1/1:75.127:24:0:0:24:896:-10,-7.22472,0 1/1:23.9519:7:0:0:7:265:-10,-2.10721,0 1/1:20.9416:6:0:0:6:199:-10,-1.80618,0 1/1:11.9107:3:0:0:3:114:-10,-0.90309,0 0/1:99:42:17:616:25:935:-10,0,-10 1/1:99:52:0:0:52:1867:-10,-10,0 1/1:93.1886:30:0:0:30:1047:-10,-9.0309,0 1/1:78.1372:25:0:0:25:891:-10,-7.52575,0 1/1:90.1784:29:0:0:29:1065:-10,-8.72987,0 1/1:35.9931:11:0:0:11:387:-10,-3.31133,0 0/1:99:20:8:304:12:424:-10,0,-10 0/1:99:42:21:789:21:788:-10,0,-10 0/1:99:17:4:151:13:441:-10,0,-10 0/1:99:25:10:366:15:567:-10,0,-10 .:.:.:.:.:.:.:. 0/0:46.2123:21:21:788:0:0:0,-6.32163,-10 1/1:81.1476:26:0:0:26:947:-10,-7.82678,0 0/0:64.2741:27:27:1009:0:0:0,-8.12781,-10 0/0:40.1917:19:19:710:0:0:0,-5.71957,-10 1/1:35.9931:11:0:0:11:389:-10,-3.31133,0 0/0:22.1299:13:13:460:0:0:0,-3.91339,-10 0/1:99:22:7:219:15:564:-10,0,-10 0/0:25.1402:14:14:527:0:0:0,-4.21442,-10 0/1:0.00419482:1:1:38:0:0:0,-0.30103,-3.8 0/0:28.1505:15:15:545:0:0:0,-4.51545,-10 0/0:31.1608:16:16:589:0:0:0,-4.81648,-10 0/0:43.202:20:20:712:0:0:0,-6.0206,-10 0/0:13.099:10:10:380:0:0:0,-3.0103,-10 0/1:0.00419482:1:1:38:0:0:0,-0.30103,-3.8 0/1:99:38:20:729:18:676:-10,0,-10 1/1:66.0961:21:0:0:21:712:-10,-6.32163,0 0/0:19.1196:12:12:413:0:0:0,-3.61236,-10 0/0:67.2844:28:28:1007:0:0:0,-8.42884,-10 0/0:31.1608:16:16:555:0:0:0,-4.81648,-10 1/1:87.1681:28:0:0:28:942:-10,-8.42884,0 0/1:99:36:13:490:23:825:-10,0,-10 0/0:49.2226:22:22:827:0:0:0,-6.62266,-10 0/0:37.1814:18:18:684:0:0:0,-5.41854,-10 0/0:76.3153:31:31:1130:0:0:0,-9.33193,-10 0/0:76.3153:31:31:1168:0:0:0,-9.33193,-10 0/0:16.1093:11:11:393:0:0:0,-3.31133,-10 0/1:99:41:16:552:24:861:-10,0,-10 0/0:40.1917:19:19:698:0:0:0,-5.71957,-10 0/1:99:43:25:941:18:649:-10,0,-10 0/0:10.0887:9:9:320:0:0:0,-2.70927,-10 0/0:7.0784:8:8:303:0:0:0,-2.40824,-10 0/0:97.387:38:38:1409:0:0:0,-10,-10 0/0:43.202:20:20:728:0:0:0,-6.0206,-10 0/1:0.471606:24:23:849:1:38:0,-2.04451,-10 0/0:7.0784:8:8:290:0:0:0,-2.40824,-10 1/1:45.024:14:0:0:14:486:-10,-4.21442,0 1/1:42.0137:13:0:0:13:466:-10,-3.91339,0 1/1:99:45:0:0:45:1635:-10,-10,0 1/1:48.0343:15:0:0:15:553:-10,-4.51545,0 1/1:99:40:0:0:40:1495:-10,-10,0 1/1:57.0652:18:0:0:18:649:-10,-5.41854,0 1/1:60.0755:19:0:0:19:715:-10,-5.71957,0 1/1:99:39:0:0:39:1369:-10,-10,0 1/1:72.1167:23:0:0:23:867:-10,-6.92369,0 1/1:20.9416:6:0:0:6:180:-10,-1.80618,0 1/1:99:44:0:0:44:1606:-10,-10,0 1/1:51.0446:16:0:0:16:583:-10,-4.81648,0 1/1:75.127:24:0:0:24:883:-10,-7.22472,0 1/1:99:38:0:0:38:1399:-10,-10,0 1/1:87.1681:28:0:0:28:1021:-10,-8.42884,0 1/1:45.024:14:0:0:14:505:-10,-4.21442,0 1/1:99:36:0:0:36:1252:-10,-10,0 1/1:39.0034:12:0:0:12:428:-10,-3.61236,0 1/1:54.0549:17:0:0:17:586:-10,-5.11751,0 1/1:57.0652:18:0:0:18:624:-10,-5.41854,0 1/1:32.9828:10:0:0:10:380:-10,-3.0103,0 1/1:39.0034:12:0:0:12:448:-10,-3.61236,0 1/1:99:32:0:0:32:1163:-10,-9.63296,0 1/1:66.0961:21:0:0:21:757:-10,-6.32163,0 0/1:99:20:13:482:7:265:-10,0,-10 1/1:51.0446:16:0:0:16:596:-10,-4.81648,0 1/1:78.1372:25:0:0:25:884:-10,-7.52575,0 1/1:29.9725:9:0:0:9:322:-10,-2.70927,0 0/0:88.3558:35:35:1292:0:0:0,-10,-10 0/0:19.1196:12:12:448:0:0:0,-3.61236,-10 1/1:29.9725:9:0:0:9:299:-10,-2.70927,0 1/1:75.127:24:0:0:24:897:-10,-7.22472,0 1/1:60.0755:19:0:0:19:635:-10,-5.71957,0 1/1:42.0137:13:0:0:13:485:-10,-3.91339,0 scaffold_293 128797 . T C 6197.77 . AB=0.571429;ABP=10.7656;AC=19;AF=0.103261;AN=184;AO=225;CIGAR=1X;DP=2002;DPB=2002;DPRA=1.07629;EPP=11.1268;EPPR=3.83683;GTI=3;LEN=1;MEANALT=1;MQM=59.9956;MQMR=59.9944;NS=92;NUMALT=1;ODDS=1.6726;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8275;QR=64932;RO=1776;RPP=491.592;RPPR=3859.55;RUN=1;SAF=127;SAP=11.1268;SAR=98;SRF=875;SRP=3.83683;SRR=901;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.8621:13:13:447:0:0:0,-3.91339,-10 0/0:74.9651:23:23:850:0:0:0,-6.92369,-10 0/0:83.9958:26:26:948:0:0:0,-7.82678,-10 0/0:35.8312:10:10:350:0:0:0,-3.0103,-10 0/1:99:12:4:152:8:299:-10,0,-10 1/1:20.963:15:0:0:15:531:-10,-4.51545,0 0/0:99:48:47:1769:1:38:0,-8.9682,-10 0/0:83.9958:26:26:979:0:0:0,-7.82678,-10 0/0:38.8415:11:11:393:0:0:0,-3.31133,-10 0/1:0.00413175:1:0:0:1:38:-3.8,-0.30103,0 0/1:0.134205:6:0:0:6:210:-10,-1.80618,0 0/0:44.8621:13:13:489:0:0:0,-3.91339,-10 0/0:93.0258:29:29:1071:0:0:0,-8.72987,-10 0/1:99:27:12:381:15:546:-10,0,-10 0/0:87.006:27:27:952:0:0:0,-8.12781,-10 1/1:99:49:0:0:49:1781:-10,-10,0 0/0:99:40:40:1477:0:0:0,-10,-10 0/0:32.8209:9:9:332:0:0:0,-2.70927,-10 0/0:74.9651:23:23:846:0:0:0,-6.92369,-10 0/0:99:35:35:1293:0:0:0,-10,-10 0/0:90.016:28:28:1041:0:0:0,-8.42884,-10 0/0:96.0351:30:30:1088:0:0:0,-9.0309,-10 0/0:20.7797:5:5:190:0:0:0,-1.50515,-10 0/0:87.006:27:27:998:0:0:0,-8.12781,-10 0/0:74.9651:23:23:854:0:0:0,-6.92369,-10 0/0:96.0351:30:30:1112:0:0:0,-9.0309,-10 0/0:71.9548:22:22:833:0:0:0,-6.62266,-10 0/0:77.9753:24:24:910:0:0:0,-7.22472,-10 0/0:80.9856:25:25:871:0:0:0,-7.52575,-10 0/0:99:37:37:1389:0:0:0,-10,-10 0/0:29.8106:8:8:304:0:0:0,-2.40824,-10 0/0:23.79:6:6:228:0:0:0,-1.80618,-10 0/0:71.9548:23:22:821:0:0:0,-6.62266,-10 0/0:44.8621:13:13:489:0:0:0,-3.91339,-10 0/0:53.893:16:16:602:0:0:0,-4.81648,-10 0/0:29.8106:8:8:280:0:0:0,-2.40824,-10 0/0:14.7591:3:3:91:0:0:0,-0.90309,-8.49333 0/0:99:36:36:1340:0:0:0,-10,-10 0/0:41.8518:12:12:441:0:0:0,-3.61236,-10 0/0:56.9033:17:17:640:0:0:0,-5.11751,-10 0/0:96.0351:30:30:1080:0:0:0,-9.0309,-10 0/0:90.016:28:28:1031:0:0:0,-8.42884,-10 0/0:44.8621:13:13:456:0:0:0,-3.91339,-10 0/0:93.0258:29:29:1068:0:0:0,-8.72987,-10 0/0:74.9651:23:23:806:0:0:0,-6.92369,-10 0/0:68.9445:21:21:792:0:0:0,-6.32163,-10 0/0:99:40:40:1466:0:0:0,-10,-10 0/0:99:37:37:1359:0:0:0,-10,-10 0/0:41.8518:12:12:394:0:0:0,-3.61236,-10 0/0:99:40:40:1434:0:0:0,-10,-10 0/0:44.8621:13:13:470:0:0:0,-3.91339,-10 0/0:99:50:50:1804:0:0:0,-10,-10 0/0:50.8827:15:15:554:0:0:0,-4.51545,-10 0/0:17.7694:4:4:151:0:0:0,-1.20412,-10 0/0:99:40:40:1430:0:0:0,-10,-10 0/0:44.8621:13:13:469:0:0:0,-3.91339,-10 0/0:62.9239:19:19:701:0:0:0,-5.71957,-10 0/0:29.8106:8:8:304:0:0:0,-2.40824,-10 0/0:65.9342:20:20:731:0:0:0,-6.0206,-10 0/0:62.9239:19:19:670:0:0:0,-5.71957,-10 0/1:99:41:18:656:23:848:-10,0,-10 0/0:62.9239:19:19:704:0:0:0,-5.71957,-10 0/0:99:41:41:1450:0:0:0,-10,-10 0/1:99:26:11:395:15:568:-10,0,-10 0/0:38.8415:11:11:417:0:0:0,-3.31133,-10 0/0:99:32:32:1145:0:0:0,-9.63296,-10 0/0:71.9548:22:22:802:0:0:0,-6.62266,-10 0/0:44.8621:13:13:485:0:0:0,-3.91339,-10 0/1:99:36:18:680:18:655:-10,0,-10 0/1:0.272691:7:0:0:7:261:-10,-2.10721,0 0/0:53.893:16:16:603:0:0:0,-4.81648,-10 1/1:81.1689:35:0:0:35:1294:-10,-10,0 0/0:83.9958:26:26:957:0:0:0,-7.82678,-10 0/0:44.8621:13:13:471:0:0:0,-3.91339,-10 0/0:99:31:31:1113:0:0:0,-9.33193,-10 1/1:8.92182:11:0:0:11:416:-10,-3.31133,0 0/0:59.9136:18:18:639:0:0:0,-5.41854,-10 0/0:53.893:16:16:559:0:0:0,-4.81648,-10 0/0:23.79:6:6:226:0:0:0,-1.80618,-10 0/0:44.8621:13:13:460:0:0:0,-3.91339,-10 0/0:99:45:45:1680:0:0:0,-10,-10 0/0:71.9548:22:22:783:0:0:0,-6.62266,-10 0/0:99:35:35:1284:0:0:0,-10,-10 0/0:96.0351:30:30:1077:0:0:0,-9.0309,-10 0/1:99:19:12:448:7:263:-10,0,-10 1/1:17.9527:14:0:0:14:527:-10,-4.21442,0 0/0:38.8415:11:11:396:0:0:0,-3.31133,-10 0/0:50.8827:15:15:548:0:0:0,-4.51545,-10 0/0:32.8209:9:9:342:0:0:0,-2.70927,-10 0/0:71.9548:22:22:815:0:0:0,-6.62266,-10 0/0:71.9548:22:22:823:0:0:0,-6.62266,-10 0/0:50.8827:15:15:553:0:0:0,-4.51545,-10 scaffold_293 145281 . C T 5908.59 . AB=0.539419;ABP=6.263;AC=19;AF=0.103261;AN=184;AO=224;CIGAR=1X;DP=1863;DPB=1863;DPRA=1.08143;EPP=3.16541;EPPR=3.83936;GTI=4;LEN=1;MEANALT=1.05556;MQM=59.8214;MQMR=59.9652;NS=92;NUMALT=1;ODDS=0.176873;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8050;QR=59131;RO=1637;RPP=489.42;RPPR=3557.71;RUN=1;SAF=114;SAP=3.16541;SAR=110;SRF=806;SRP=3.83936;SRR=831;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:16.8339:18:17:618:1:37:0,-0.463267,-10 0/0:26.7639:6:6:214:0:0:0,-1.80618,-10 0/0:68.9081:20:20:717:0:0:0,-6.0206,-10 0/0:32.7845:8:8:300:0:0:0,-2.40824,-10 0/0:44.8257:12:12:425:0:0:0,-3.61236,-10 0/1:0.829639:7:0:0:7:253:-10,-2.10721,0 0/0:99:41:41:1512:0:0:0,-10,-10 0/0:62.8875:18:18:652:0:0:0,-5.41854,-10 0/0:56.8669:16:16:573:0:0:0,-4.81648,-10 0/1:0.0236646:2:0:0:2:75:-7.125,-0.60206,0 0/1:0.395038:6:0:0:6:215:-10,-1.80618,0 0/0:23.7536:5:5:161:0:0:0,-1.50515,-10 0/0:99:42:42:1529:0:0:0,-10,-10 0/1:99:31:16:586:15:553:-10,0,-10 0/0:77.939:23:23:831:0:0:0,-6.92369,-10 0/1:99:18:12:420:6:200:-10,0,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:38.8051:10:10:372:0:0:0,-3.0103,-10 0/0:83.9595:25:25:940:0:0:0,-7.52575,-10 0/1:99:32:15:561:17:634:-10,0,-10 0/0:56.8669:16:16:573:0:0:0,-4.81648,-10 0/1:99:36:15:556:21:704:-10,0,-10 0/0:41.8154:11:11:379:0:0:0,-3.31133,-10 0/0:74.9287:22:22:768:0:0:0,-6.62266,-10 0/0:68.9081:20:20:684:0:0:0,-6.0206,-10 0/0:53.8566:15:15:534:0:0:0,-4.51545,-10 0/0:47.836:13:13:439:0:0:0,-3.91339,-10 0/0:62.8875:18:18:651:0:0:0,-5.41854,-10 0/0:71.9184:21:21:758:0:0:0,-6.32163,-10 0/0:99:37:37:1322:0:0:0,-10,-10 0/0:23.7536:5:5:178:0:0:0,-1.50515,-10 0/0:44.8257:12:12:410:0:0:0,-3.61236,-10 0/0:65.8978:19:19:693:0:0:0,-5.71957,-10 0/0:44.8257:12:12:441:0:0:0,-3.61236,-10 0/0:47.836:13:13:475:0:0:0,-3.91339,-10 0/0:17.733:3:3:87:0:0:0,-0.90309,-8.12 0/0:53.8566:15:15:487:0:0:0,-4.51545,-10 0/1:99:40:25:933:15:501:-10,0,-10 0/0:59.8772:17:17:630:0:0:0,-5.11751,-10 0/0:50.8463:14:14:527:0:0:0,-4.21442,-10 0/0:99:34:34:1216:0:0:0,-10,-10 0/0:99:37:37:1323:0:0:0,-10,-10 0/0:80.9493:24:24:886:0:0:0,-7.22472,-10 0/0:96.0003:30:29:1065:0:0:0,-8.72987,-10 0/0:62.8875:18:18:638:0:0:0,-5.41854,-10 0/0:62.8875:18:18:645:0:0:0,-5.41854,-10 0/0:99:58:58:2148:0:0:0,-10,-10 0/0:96.0003:29:29:1060:0:0:0,-8.72987,-10 0/0:62.8875:18:18:679:0:0:0,-5.41854,-10 0/0:99:47:47:1686:0:0:0,-10,-10 0/0:35.7948:9:9:326:0:0:0,-2.70927,-10 0/0:99:35:35:1258:0:0:0,-10,-10 0/0:38.8051:10:10:373:0:0:0,-3.0103,-10 0/0:32.7845:8:8:274:0:0:0,-2.40824,-10 0/0:99:45:45:1627:0:0:0,-10,-10 0/0:53.8566:15:15:534:0:0:0,-4.51545,-10 0/0:27.0036:22:21:786:1:38:0,-1.48024,-10 0/0:29.7742:7:7:237:0:0:0,-2.10721,-10 0/0:41.8154:11:11:405:0:0:0,-3.31133,-10 0/0:44.8257:12:12:413:0:0:0,-3.61236,-10 0/1:99:22:11:416:11:417:-10,0,-10 1/1:10.8775:24:1:38:22:789:-10,-2.03196,0 0/0:99:38:38:1380:0:0:0,-10,-10 0/1:99:28:11:358:17:635:-10,0,-10 0/0:23.7536:5:5:179:0:0:0,-1.50515,-10 0/0:99:31:31:1133:0:0:0,-9.33193,-10 0/0:44.8257:12:12:436:0:0:0,-3.61236,-10 0/0:50.8463:14:14:479:0:0:0,-4.21442,-10 1/1:99:45:0:0:45:1618:-10,-10,0 1/1:26.6527:13:0:0:13:458:-10,-3.91339,0 0/0:89.9791:27:27:971:0:0:0,-8.12781,-10 0/0:96.0003:29:29:1054:0:0:0,-8.72987,-10 0/0:77.939:23:23:847:0:0:0,-6.92369,-10 0/0:68.9081:20:20:745:0:0:0,-6.0206,-10 0/0:99:30:30:1042:0:0:0,-9.0309,-10 1/1:20.6321:11:0:0:11:396:-10,-3.31133,0 0/0:44.8257:12:12:452:0:0:0,-3.61236,-10 0/0:1.29584:14:13:493:1:37:-0.631708,0,-10 0/0:32.7845:8:8:299:0:0:0,-2.40824,-10 0/0:53.8566:15:15:532:0:0:0,-4.51545,-10 0/0:99:34:34:1182:0:0:0,-10,-10 0/0:99:46:46:1630:0:0:0,-10,-10 0/0:99:35:35:1258:0:0:0,-10,-10 0/0:59.8772:17:17:598:0:0:0,-5.11751,-10 0/1:99:19:6:223:13:490:-10,0,-10 0/0:20.7433:4:4:140:0:0:0,-1.20412,-10 0/0:56.8669:16:16:581:0:0:0,-4.81648,-10 0/0:32.7845:8:8:275:0:0:0,-2.40824,-10 0/0:20.7433:4:4:142:0:0:0,-1.20412,-10 0/0:62.8875:18:18:683:0:0:0,-5.41854,-10 0/0:44.8257:12:12:448:0:0:0,-3.61236,-10 0/0:44.8257:12:12:454:0:0:0,-3.61236,-10 scaffold_293 196846 . C T 292.019 . AB=0.413793;ABP=4.88226;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1807;DPB=1807;DPRA=1.07082;EPP=4.51363;EPPR=18.1937;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9732;NS=92;NUMALT=1;ODDS=6.94471;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=480;QR=65776;RO=1794;RPP=31.2394;RPPR=3898.63;RUN=1;SAF=8;SAP=4.51363;SAR=5;SRF=841;SRP=18.1937;SRR=953;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:83.4064:17:17:586:0:0:0,-5.11751,-10 0/0:62.3344:10:10:374:0:0:0,-3.0103,-10 0/0:71.3653:13:13:490:0:0:0,-3.91339,-10 0/0:83.4064:17:17:646:0:0:0,-5.11751,-10 0/0:74.3756:14:14:511:0:0:0,-4.21442,-10 0/0:62.3344:10:10:366:0:0:0,-3.0103,-10 0/0:99:35:35:1303:0:0:0,-10,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:71.3653:13:13:493:0:0:0,-3.91339,-10 0/0:53.3035:7:7:251:0:0:0,-2.10721,-10 0/0:62.3344:10:10:374:0:0:0,-3.0103,-10 0/0:68.355:12:12:428:0:0:0,-3.61236,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:99:26:26:957:0:0:0,-7.82678,-10 0/0:99:25:25:925:0:0:0,-7.52575,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:99:41:41:1490:0:0:0,-10,-10 0/0:56.3138:8:8:300:0:0:0,-2.40824,-10 0/0:99:24:24:895:0:0:0,-7.22472,-10 0/0:99:38:38:1418:0:0:0,-10,-10 0/0:83.4064:17:17:609:0:0:0,-5.11751,-10 0/0:99:25:25:897:0:0:0,-7.52575,-10 0/0:56.3138:8:8:292:0:0:0,-2.40824,-10 0/0:92.4351:20:20:735:0:0:0,-6.0206,-10 0/0:99:25:25:897:0:0:0,-7.52575,-10 0/0:99:28:28:1052:0:0:0,-8.42884,-10 0/0:62.3344:10:10:347:0:0:0,-3.0103,-10 0/0:65.3447:11:11:415:0:0:0,-3.31133,-10 0/0:99:24:24:861:0:0:0,-7.22472,-10 0/0:99:31:31:1143:0:0:0,-9.33193,-10 0/0:59.3241:9:9:339:0:0:0,-2.70927,-10 0/0:50.2932:6:6:213:0:0:0,-1.80618,-10 0/0:89.4268:19:19:689:0:0:0,-5.71957,-10 0/0:80.3961:16:16:582:0:0:0,-4.81648,-10 0/0:74.3756:14:14:530:0:0:0,-4.21442,-10 0/0:71.3653:13:13:485:0:0:0,-3.91339,-10 0/0:59.3241:9:9:319:0:0:0,-2.70927,-10 0/0:99:24:24:906:0:0:0,-7.22472,-10 0/0:86.4166:18:18:649:0:0:0,-5.41854,-10 0/0:77.3859:15:15:566:0:0:0,-4.51545,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:86.4166:18:18:679:0:0:0,-5.41854,-10 0/0:74.3756:14:14:532:0:0:0,-4.21442,-10 0/0:99:37:37:1370:0:0:0,-10,-10 0/0:99:28:28:1044:0:0:0,-8.42884,-10 0/0:95.4466:21:21:781:0:0:0,-6.32163,-10 0/0:99:35:35:1298:0:0:0,-10,-10 0/0:99:31:31:1150:0:0:0,-9.33193,-10 0/0:71.3653:13:13:483:0:0:0,-3.91339,-10 0/0:99:35:35:1208:0:0:0,-10,-10 0/0:92.4351:20:20:730:0:0:0,-6.0206,-10 0/0:99:41:41:1479:0:0:0,-10,-10 0/0:71.3653:13:13:494:0:0:0,-3.91339,-10 0/0:44.2726:4:4:152:0:0:0,-1.20412,-10 0/0:99:43:43:1605:0:0:0,-10,-10 0/0:0.00418304:13:12:422:1:29:-0.100553,0,-10 0/0:86.4166:18:18:651:0:0:0,-5.41854,-10 0/0:65.3447:11:11:409:0:0:0,-3.31133,-10 0/0:71.3653:13:13:486:0:0:0,-3.91339,-10 0/0:65.3447:11:11:396:0:0:0,-3.31133,-10 0/0:99:29:29:1016:0:0:0,-8.72987,-10 0/0:99:28:28:1049:0:0:0,-8.42884,-10 0/0:99:42:42:1577:0:0:0,-10,-10 0/0:86.4166:18:18:639:0:0:0,-5.41854,-10 0/0:71.3653:13:13:446:0:0:0,-3.91339,-10 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:92.4351:20:20:726:0:0:0,-6.0206,-10 0/0:56.3138:8:8:304:0:0:0,-2.40824,-10 0/0:99:35:35:1255:0:0:0,-10,-10 0/0:68.355:12:12:433:0:0:0,-3.61236,-10 0/0:74.3756:14:14:498:0:0:0,-4.21442,-10 0/1:99:29:17:643:12:451:-10,0,-10 0/0:95.4466:21:21:784:0:0:0,-6.32163,-10 0/0:68.355:12:12:418:0:0:0,-3.61236,-10 0/0:95.4466:21:21:743:0:0:0,-6.32163,-10 0/0:68.355:12:12:419:0:0:0,-3.61236,-10 0/0:74.3756:14:14:532:0:0:0,-4.21442,-10 0/0:77.3859:15:15:556:0:0:0,-4.51545,-10 0/0:65.3447:11:11:418:0:0:0,-3.31133,-10 0/0:59.3241:9:9:339:0:0:0,-2.70927,-10 0/0:99:27:27:950:0:0:0,-8.12781,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:86.4166:18:18:626:0:0:0,-5.41854,-10 0/0:89.4268:19:19:709:0:0:0,-5.71957,-10 0/0:99:26:26:985:0:0:0,-7.82678,-10 0/0:53.3035:7:7:266:0:0:0,-2.10721,-10 0/0:98.4558:22:22:801:0:0:0,-6.62266,-10 0/0:99:23:23:853:0:0:0,-6.92369,-10 0/0:56.3138:8:8:298:0:0:0,-2.40824,-10 0/0:80.3961:16:16:552:0:0:0,-4.81648,-10 0/0:53.3035:7:7:266:0:0:0,-2.10721,-10 0/0:71.3653:13:13:485:0:0:0,-3.91339,-10 scaffold_293 212440 . G A 1844.39 . AB=0.569444;ABP=6.02623;AC=9;AF=0.0494505;AN=182;AO=77;CIGAR=1X;DP=1350;DPB=1350;DPRA=1.04348;EPP=3.26411;EPPR=3.25613;GTI=1;LEN=1;MEANALT=1;MQM=59.987;MQMR=59.9803;NS=91;NUMALT=1;ODDS=2.77842;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2669;QR=46493;RO=1272;RPP=170.214;RPPR=2661.88;RUN=1;SAF=37;SAP=3.26411;SAR=40;SRF=630;SRP=3.25613;SRR=642;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:43.3686:11:11:393:0:0:0,-3.31133,-10 0/0:40.3583:10:10:379:0:0:0,-3.0103,-10 0/0:70.4613:20:20:741:0:0:0,-6.0206,-10 0/0:52.3995:14:14:527:0:0:0,-4.21442,-10 0/0:34.3377:8:8:300:0:0:0,-2.40824,-10 0/0:37.348:9:9:341:0:0:0,-2.70927,-10 0/0:79.4921:23:23:818:0:0:0,-6.92369,-10 1/1:31.0321:21:0:0:21:694:-10,-6.32163,0 0/0:58.4201:16:16:597:0:0:0,-4.81648,-10 0/0:19.2862:3:3:92:0:0:0,-0.90309,-8.58667 0/0:19.2862:3:3:114:0:0:0,-0.90309,-10 0/0:19.2862:3:3:112:0:0:0,-0.90309,-10 0/0:82.5024:24:24:908:0:0:0,-7.22472,-10 0/1:99:27:15:566:12:422:-10,0,-10 0/1:99:19:5:189:14:511:-10,0,-10 0/0:85.5126:25:25:921:0:0:0,-7.52575,-10 0/0:76.4818:22:22:825:0:0:0,-6.62266,-10 0/0:31.3274:7:7:262:0:0:0,-2.10721,-10 0/0:55.4098:15:15:521:0:0:0,-4.51545,-10 0/0:76.4818:22:22:791:0:0:0,-6.62266,-10 0/0:52.3995:14:14:498:0:0:0,-4.21442,-10 0/0:97.555:29:29:1049:0:0:0,-8.72987,-10 .:.:.:.:.:.:.:. 0/0:37.348:9:9:327:0:0:0,-2.70927,-10 0/0:55.4098:15:15:551:0:0:0,-4.51545,-10 0/0:58.4201:16:16:598:0:0:0,-4.81648,-10 0/0:46.3789:12:12:453:0:0:0,-3.61236,-10 0/0:46.3789:12:12:454:0:0:0,-3.61236,-10 0/0:40.3583:10:10:368:0:0:0,-3.0103,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:16.2759:2:2:71:0:0:0,-0.60206,-6.745 0/0:28.3171:6:6:202:0:0:0,-1.80618,-10 0/0:73.4716:21:21:749:0:0:0,-6.32163,-10 0/0:55.4098:15:15:541:0:0:0,-4.51545,-10 0/0:46.3789:12:12:456:0:0:0,-3.61236,-10 0/0:16.2759:2:2:76:0:0:0,-0.60206,-7.22 0/0:49.3892:13:13:484:0:0:0,-3.91339,-10 0/0:82.5024:24:24:846:0:0:0,-7.22472,-10 0/0:43.3686:11:11:416:0:0:0,-3.31133,-10 0/0:43.3686:11:11:418:0:0:0,-3.31133,-10 0/0:70.4613:20:20:729:0:0:0,-6.0206,-10 0/0:61.4304:17:17:634:0:0:0,-5.11751,-10 0/0:58.4201:16:16:538:0:0:0,-4.81648,-10 0/0:55.4098:15:15:533:0:0:0,-4.51545,-10 0/0:34.3377:8:8:292:0:0:0,-2.40824,-10 0/0:61.4304:18:17:635:0:0:0,-5.11751,-10 0/0:99:34:34:1283:0:0:0,-10,-10 0/0:46.3789:12:12:442:0:0:0,-3.61236,-10 0/0:49.3892:13:13:494:0:0:0,-3.91339,-10 0/0:82.5024:24:24:847:0:0:0,-7.22472,-10 0/0:46.3789:12:12:450:0:0:0,-3.61236,-10 0/0:82.5024:24:24:864:0:0:0,-7.22472,-10 0/0:40.3583:10:10:380:0:0:0,-3.0103,-10 0/0:34.3377:8:8:304:0:0:0,-2.40824,-10 0/0:97.555:29:29:1005:0:0:0,-8.72987,-10 0/0:37.348:9:9:340:0:0:0,-2.70927,-10 0/0:64.4407:18:18:678:0:0:0,-5.41854,-10 0/0:40.3583:10:10:350:0:0:0,-3.0103,-10 0/0:58.4201:16:16:557:0:0:0,-4.81648,-10 0/0:28.3171:6:6:214:0:0:0,-1.80618,-10 0/0:58.4201:16:16:580:0:0:0,-4.81648,-10 0/0:58.4201:16:16:492:0:0:0,-4.81648,-10 0/0:99:33:33:1183:0:0:0,-9.93399,-10 0/0:31.3274:7:7:252:0:0:0,-2.10721,-10 0/0:46.3789:12:12:434:0:0:0,-3.61236,-10 0/1:99:19:6:228:13:438:-10,0,-10 0/0:61.4304:17:17:599:0:0:0,-5.11751,-10 0/0:25.3068:5:5:178:0:0:0,-1.50515,-10 0/0:82.5024:24:24:855:0:0:0,-7.22472,-10 0/0:40.3583:10:10:373:0:0:0,-3.0103,-10 0/0:67.451:19:19:680:0:0:0,-5.71957,-10 0/0:79.4921:23:23:849:0:0:0,-6.92369,-10 0/0:46.3789:12:12:455:0:0:0,-3.61236,-10 0/0:67.451:19:19:720:0:0:0,-5.71957,-10 0/0:82.5024:24:24:904:0:0:0,-7.22472,-10 0/1:19.6791:6:5:190:1:38:-2.77197,0,-10 1/1:12.9703:15:0:0:15:528:-10,-4.51545,0 0/0:34.3377:8:8:292:0:0:0,-2.40824,-10 0/0:28.3171:6:6:203:0:0:0,-1.80618,-10 0/0:22.2965:4:4:149:0:0:0,-1.20412,-10 0/0:88.5228:26:26:940:0:0:0,-7.82678,-10 0/0:73.4716:21:21:784:0:0:0,-6.32163,-10 0/0:40.3583:10:10:368:0:0:0,-3.0103,-10 0/0:58.4201:16:16:584:0:0:0,-4.81648,-10 0/0:67.451:19:19:700:0:0:0,-5.71957,-10 0/0:16.2759:2:2:76:0:0:0,-0.60206,-7.22 0/0:58.4201:16:16:589:0:0:0,-4.81648,-10 0/0:58.4201:16:16:581:0:0:0,-4.81648,-10 0/1:0.000345468:1:0:0:1:38:-3.8,-0.30103,0 0/0:52.3995:14:14:531:0:0:0,-4.21442,-10 0/0:55.4098:15:15:570:0:0:0,-4.51545,-10 0/0:49.3892:13:13:494:0:0:0,-3.91339,-10 scaffold_293 212457 . A G 14242.3 . AB=0.547794;ABP=8.40705;AC=70;AF=0.384615;AN=182;AO=514;CIGAR=1X;DP=1344;DPB=1344;DPRA=1.01558;EPP=5.05503;EPPR=3.01293;GTI=5;LEN=1;MEANALT=1.02381;MQM=59.9942;MQMR=59.9722;NS=91;NUMALT=1;ODDS=0.372922;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=18611;QR=30219;RO=827;RPP=1119.15;RPPR=1798.82;RUN=1;SAF=246;SAP=5.05503;SAR=268;SRF=413;SRP=3.01293;SRR=414;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:25.3314:11:0:0:11:397:-10,-3.31133,0 0/0:31.2456:10:10:379:0:0:0,-3.0103,-10 0/0:58.3383:19:19:712:0:0:0,-5.71957,-10 0/0:43.2868:14:14:528:0:0:0,-4.21442,-10 0/0:25.225:8:8:303:0:0:0,-2.40824,-10 0/0:28.2353:9:9:341:0:0:0,-2.70927,-10 0/0:70.3795:23:23:830:0:0:0,-6.92369,-10 0/0:61.3486:21:20:622:0:0:0,-6.0206,-10 0/0:49.3074:16:16:593:0:0:0,-4.81648,-10 0/0:10.1735:3:3:111:0:0:0,-0.90309,-10 0/0:10.1735:3:3:112:0:0:0,-0.90309,-10 0/0:10.1735:3:3:114:0:0:0,-0.90309,-10 0/1:99:24:9:340:15:552:-10,0,-10 0/0:82.4206:27:27:1006:0:0:0,-8.12781,-10 0/0:58.3383:19:19:658:0:0:0,-5.71957,-10 0/0:76.4:25:25:940:0:0:0,-7.52575,-10 0/0:67.3692:22:22:828:0:0:0,-6.62266,-10 0/0:22.2147:7:7:242:0:0:0,-2.10721,-10 0/1:99:15:6:184:9:330:-10,0,-10 0/1:99:22:9:342:13:442:-10,0,-10 0/1:99:14:5:181:9:313:-10,0,-10 0/1:99:29:15:544:14:519:-10,0,-10 .:.:.:.:.:.:.:. 1/1:19.3108:9:0:0:9:318:-10,-2.70927,0 0/0:46.2971:15:15:565:0:0:0,-4.51545,-10 1/1:40.3829:16:0:0:16:602:-10,-4.81648,0 1/1:28.3417:12:0:0:12:430:-10,-3.61236,0 0/0:37.2662:12:12:455:0:0:0,-3.61236,-10 1/1:22.3211:10:0:0:10:380:-10,-3.0103,0 0/1:99:31:15:566:16:592:-10,0,-10 0/1:0.0658424:2:0:0:2:53:-5.035,-0.60206,0 1/1:10.2799:6:0:0:6:206:-10,-1.80618,0 1/1:52.4241:20:0:0:20:704:-10,-6.0206,0 1/1:37.3726:15:0:0:15:545:-10,-4.51545,0 1/1:28.3417:12:0:0:12:456:-10,-3.61236,0 0/1:0.0658424:2:0:0:2:76:-7.22,-0.60206,0 1/1:31.352:13:0:0:13:459:-10,-3.91339,0 0/1:99:24:14:523:10:357:-10,0,-10 0/0:34.2559:11:11:408:0:0:0,-3.31133,-10 1/1:22.3211:10:0:0:10:380:-10,-3.0103,0 1/1:52.4241:20:0:0:20:726:-10,-6.0206,0 1/1:43.3932:17:0:0:17:628:-10,-5.11751,0 0/0:49.3074:16:16:596:0:0:0,-4.81648,-10 0/1:99:15:8:281:7:264:-10,0,-10 1/1:16.3005:8:0:0:8:290:-10,-2.40824,0 1/1:43.3932:18:0:0:17:620:-10,-5.11751,0 1/1:94.5671:34:0:0:34:1274:-10,-10,0 1/1:28.3417:12:0:0:12:446:-10,-3.61236,0 1/1:31.352:13:0:0:13:486:-10,-3.91339,0 0/1:99:24:9:316:15:538:-10,0,-10 1/1:28.3417:12:0:0:12:428:-10,-3.61236,0 0/1:99:24:14:510:10:376:-10,0,-10 1/1:22.3211:10:0:0:10:376:-10,-3.0103,0 1/1:16.3005:8:0:0:8:280:-10,-2.40824,0 1/1:79.5168:29:0:0:29:1019:-10,-8.72987,0 1/1:19.3108:9:0:0:9:314:-10,-2.70927,0 0/1:0.0771223:18:1:38:17:640:-10,-0.363267,0 1/1:22.3211:10:0:0:10:372:-10,-3.0103,0 0/0:49.3074:16:16:592:0:0:0,-4.81648,-10 0/0:19.2044:6:6:206:0:0:0,-1.80618,-10 0/1:99:16:11:413:5:187:-10,0,-10 0/0:49.3074:16:16:583:0:0:0,-4.81648,-10 0/0:99:33:33:1180:0:0:0,-9.93399,-10 0/1:99:7:3:114:4:112:-9.79686,0,-10 0/0:37.2662:12:12:432:0:0:0,-3.61236,-10 0/0:55.328:19:18:641:0:0:0,-5.41854,-10 0/0:52.3177:17:17:620:0:0:0,-5.11751,-10 0/1:41.6206:5:4:137:1:38:-2.99382,0,-10 0/0:73.3898:24:24:885:0:0:0,-7.22472,-10 0/0:31.2456:10:10:380:0:0:0,-3.0103,-10 0/0:55.328:18:18:676:0:0:0,-5.41854,-10 0/0:70.3795:23:23:845:0:0:0,-6.92369,-10 0/0:37.2662:12:12:449:0:0:0,-3.61236,-10 0/0:58.3383:19:19:696:0:0:0,-5.71957,-10 0/0:73.3898:24:24:878:0:0:0,-7.22472,-10 0/0:19.2044:6:6:224:0:0:0,-1.80618,-10 0/0:46.2971:15:15:518:0:0:0,-4.51545,-10 0/0:25.225:8:8:280:0:0:0,-2.40824,-10 0/0:19.2044:6:6:193:0:0:0,-1.80618,-10 0/0:13.1838:4:4:142:0:0:0,-1.20412,-10 0/0:79.4104:26:26:950:0:0:0,-7.82678,-10 0/0:61.3486:20:20:731:0:0:0,-6.0206,-10 0/0:31.2456:10:10:355:0:0:0,-3.0103,-10 0/0:49.3074:16:16:556:0:0:0,-4.81648,-10 0/0:55.328:18:18:672:0:0:0,-5.41854,-10 0/1:0.572422:2:2:76:0:0:0,-0.60206,-7.22 1/1:40.3829:16:0:0:16:560:-10,-4.81648,0 1/1:40.3829:16:0:0:16:526:-10,-4.81648,0 0/1:0.276787:1:1:38:0:0:0,-0.30103,-3.8 0/0:43.2868:14:14:527:0:0:0,-4.21442,-10 0/0:46.2971:15:15:570:0:0:0,-4.51545,-10 0/0:40.2765:13:13:492:0:0:0,-3.91339,-10 scaffold_293 306017 . C T 1780.66 . AB=0.642202;ABP=22.1551;AC=8;AF=0.0434783;AN=184;AO=71;CIGAR=1X;DP=1278;DPB=1278;DPRA=0.955671;EPP=3.04088;EPPR=4.7392;GTI=4;LEN=1;MEANALT=1;MQM=60;MQMR=59.9959;NS=92;NUMALT=1;ODDS=0.802126;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2594;QR=44201;RO=1207;RPP=157.185;RPPR=2623.98;RUN=1;SAF=35;SAP=3.04088;SAR=36;SRF=619;SRP=4.7392;SRR=588;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:42.5784:11:11:403:0:0:0,-3.31133,-10 0/0:33.5475:8:8:287:0:0:0,-2.40824,-10 0/0:51.6093:14:14:486:0:0:0,-4.21442,-10 0/0:54.6196:15:15:550:0:0:0,-4.51545,-10 0/1:1.14668:13:0:0:13:485:-10,-3.91339,0 0/0:30.5372:7:7:231:0:0:0,-2.10721,-10 0/0:78.702:23:23:813:0:0:0,-6.92369,-10 0/0:78.702:23:23:849:0:0:0,-6.92369,-10 0/0:57.6299:16:16:598:0:0:0,-4.81648,-10 0/0:24.5166:5:5:181:0:0:0,-1.50515,-10 0/0:21.5063:4:4:152:0:0:0,-1.20412,-10 0/0:18.496:3:3:114:0:0:0,-0.90309,-10 0/0:75.6917:22:22:817:0:0:0,-6.62266,-10 0/0:84.7225:25:25:906:0:0:0,-7.52575,-10 0/0:57.6299:16:16:602:0:0:0,-4.81648,-10 0/0:54.6196:15:15:535:0:0:0,-4.51545,-10 0/0:51.6093:14:14:500:0:0:0,-4.21442,-10 0/0:39.5681:10:10:374:0:0:0,-3.0103,-10 0/1:99:16:9:342:7:266:-10,0,-10 0/0:78.702:23:23:782:0:0:0,-6.92369,-10 0/0:54.6196:15:15:569:0:0:0,-4.51545,-10 0/0:60.6402:17:17:639:0:0:0,-5.11751,-10 0/0:36.5578:9:9:339:0:0:0,-2.70927,-10 0/0:33.5475:8:8:298:0:0:0,-2.40824,-10 0/0:81.7123:24:24:864:0:0:0,-7.22472,-10 0/0:57.6299:16:16:549:0:0:0,-4.81648,-10 0/0:63.6505:18:18:641:0:0:0,-5.41854,-10 0/0:39.5681:10:10:365:0:0:0,-3.0103,-10 0/0:42.5784:11:11:413:0:0:0,-3.31133,-10 0/0:69.6711:20:20:723:0:0:0,-6.0206,-10 0/0:15.4857:2:2:76:0:0:0,-0.60206,-7.22 0/0:21.5063:4:4:152:0:0:0,-1.20412,-10 0/0:69.6711:20:20:716:0:0:0,-6.0206,-10 0/0:30.5372:7:7:264:0:0:0,-2.10721,-10 0/0:39.5681:10:10:355:0:0:0,-3.0103,-10 0/0:21.5063:4:4:151:0:0:0,-1.20412,-10 0/0:39.5681:10:10:363:0:0:0,-3.0103,-10 0/0:78.702:23:23:872:0:0:0,-6.92369,-10 0/0:36.5578:9:9:330:0:0:0,-2.70927,-10 0/0:27.5269:6:6:196:0:0:0,-1.80618,-10 0/0:84.7225:25:25:927:0:0:0,-7.52575,-10 0/0:39.5681:10:10:358:0:0:0,-3.0103,-10 0/0:19.6046:11:10:378:1:16:0,-0.669937,-10 0/0:84.7225:25:25:931:0:0:0,-7.52575,-10 0/0:66.6608:19:19:680:0:0:0,-5.71957,-10 0/0:45.5887:12:12:439:0:0:0,-3.61236,-10 0/0:96.7611:29:29:1089:0:0:0,-8.72987,-10 0/0:63.6505:18:18:652:0:0:0,-5.41854,-10 0/0:24.5166:5:5:185:0:0:0,-1.50515,-10 0/0:90.7431:27:27:995:0:0:0,-8.12781,-10 0/0:48.599:13:13:494:0:0:0,-3.91339,-10 0/0:87.7326:26:26:937:0:0:0,-7.82678,-10 0/0:30.5372:7:7:262:0:0:0,-2.10721,-10 0/0:33.5475:8:8:288:0:0:0,-2.40824,-10 0/0:84.7225:25:25:915:0:0:0,-7.52575,-10 0/0:12.4754:1:1:37:0:0:0,-0.30103,-3.7 0/0:48.599:13:13:494:0:0:0,-3.91339,-10 0/0:33.5475:8:8:298:0:0:0,-2.40824,-10 0/0:45.5887:12:12:454:0:0:0,-3.61236,-10 0/0:39.5681:10:10:380:0:0:0,-3.0103,-10 0/0:78.702:23:23:862:0:0:0,-6.92369,-10 0/0:33.5475:8:8:299:0:0:0,-2.40824,-10 0/0:48.599:13:13:461:0:0:0,-3.91339,-10 0/1:99:16:8:304:8:303:-10,0,-10 0/0:33.5475:8:8:304:0:0:0,-2.40824,-10 0/0:99:35:35:1314:0:0:0,-10,-10 0/0:66.6608:19:19:719:0:0:0,-5.71957,-10 0/0:36.5578:9:9:327:0:0:0,-2.70927,-10 0/1:99:21:10:372:11:408:-10,0,-10 0/1:0.063448:9:0:0:9:319:-10,-2.70927,0 0/0:57.6299:16:16:604:0:0:0,-4.81648,-10 0/0:57.6299:16:16:594:0:0:0,-4.81648,-10 0/0:54.6196:15:15:558:0:0:0,-4.51545,-10 0/0:39.5681:10:10:375:0:0:0,-3.0103,-10 0/0:57.6299:16:16:532:0:0:0,-4.81648,-10 0/1:0.127837:10:0:0:10:375:-10,-3.0103,0 0/0:42.5784:11:11:417:0:0:0,-3.31133,-10 0/0:36.5578:9:9:316:0:0:0,-2.70927,-10 0/0:12.4754:1:1:29:0:0:0,-0.30103,-2.9 0/0:45.5887:12:12:449:0:0:0,-3.61236,-10 0/0:87.7326:26:26:942:0:0:0,-7.82678,-10 0/0:78.702:23:23:845:0:0:0,-6.92369,-10 0/0:45.5887:12:12:441:0:0:0,-3.61236,-10 0/0:63.6505:18:18:621:0:0:0,-5.41854,-10 0/1:99:22:12:429:10:369:-10,0,-10 0/1:0.000492112:2:0:0:2:53:-5.035,-0.60206,0 0/0:45.5887:12:12:405:0:0:0,-3.61236,-10 0/0:39.5681:10:10:371:0:0:0,-3.0103,-10 0/0:27.5269:6:6:228:0:0:0,-1.80618,-10 0/0:60.6402:17:17:631:0:0:0,-5.11751,-10 0/0:54.6196:15:15:559:0:0:0,-4.51545,-10 0/0:33.5475:8:8:303:0:0:0,-2.40824,-10 scaffold_293 306072 . T C 1171.71 . AB=0.5;ABP=3.0103;AC=5;AF=0.0271739;AN=184;AO=48;CIGAR=1X;DP=1277;DPB=1277;DPRA=1.47294;EPP=4.6389;EPPR=3.12347;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9959;NS=92;NUMALT=1;ODDS=3.32576;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1738;QR=44747;RO=1228;RPP=107.241;RPPR=2669.58;RUN=1;SAF=21;SAP=4.6389;SAR=27;SRF=618;SRP=3.12347;SRR=610;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.0605:11:11:391:0:0:0,-3.31133,-10 0/0:36.0296:8:8:259:0:0:0,-2.40824,-10 0/0:54.0914:14:14:485:0:0:0,-4.21442,-10 0/0:57.1017:15:15:556:0:0:0,-4.51545,-10 0/0:51.0811:13:13:489:0:0:0,-3.91339,-10 0/0:33.0193:7:7:266:0:0:0,-2.10721,-10 0/0:81.184:23:23:844:0:0:0,-6.92369,-10 0/0:81.184:23:23:833:0:0:0,-6.92369,-10 0/0:60.112:16:16:607:0:0:0,-4.81648,-10 0/0:26.9987:5:5:189:0:0:0,-1.50515,-10 0/0:23.9884:4:4:152:0:0:0,-1.20412,-10 0/0:20.9781:3:3:110:0:0:0,-0.90309,-10 0/0:78.1737:22:22:772:0:0:0,-6.62266,-10 0/0:87.2045:25:25:909:0:0:0,-7.52575,-10 0/0:60.112:16:16:603:0:0:0,-4.81648,-10 0/0:57.1017:15:15:553:0:0:0,-4.51545,-10 0/0:48.0708:12:12:389:0:0:0,-3.61236,-10 0/0:42.0502:10:10:376:0:0:0,-3.0103,-10 0/0:60.112:16:16:598:0:0:0,-4.81648,-10 0/1:99:24:15:537:9:326:-10,0,-10 0/0:57.1017:15:15:570:0:0:0,-4.51545,-10 0/1:99:17:10:377:7:262:-10,0,-10 0/0:39.0399:9:9:338:0:0:0,-2.70927,-10 0/0:36.0296:8:8:300:0:0:0,-2.40824,-10 0/0:84.1943:24:24:884:0:0:0,-7.22472,-10 0/0:60.112:16:16:579:0:0:0,-4.81648,-10 0/0:66.1326:18:18:678:0:0:0,-5.41854,-10 0/0:42.0502:10:10:346:0:0:0,-3.0103,-10 0/0:45.0605:11:11:393:0:0:0,-3.31133,-10 0/0:75.1635:21:21:723:0:0:0,-6.32163,-10 0/0:17.9678:2:2:76:0:0:0,-0.60206,-7.22 0/0:23.9884:4:4:152:0:0:0,-1.20412,-10 0/0:69.1429:19:19:716:0:0:0,-5.71957,-10 0/0:33.0193:7:7:222:0:0:0,-2.10721,-10 0/0:39.0399:9:9:317:0:0:0,-2.70927,-10 0/0:23.9884:4:4:152:0:0:0,-1.20412,-10 0/0:42.0502:10:10:375:0:0:0,-3.0103,-10 0/1:99:24:11:416:13:482:-10,0,-10 0/0:39.0399:9:9:309:0:0:0,-2.70927,-10 0/0:30.009:6:6:211:0:0:0,-1.80618,-10 0/0:84.1943:24:24:906:0:0:0,-7.22472,-10 0/0:42.0502:10:10:368:0:0:0,-3.0103,-10 0/0:45.0605:11:11:405:0:0:0,-3.31133,-10 0/0:84.1943:24:24:908:0:0:0,-7.22472,-10 0/0:69.1429:19:19:692:0:0:0,-5.71957,-10 0/0:48.0708:12:12:396:0:0:0,-3.61236,-10 0/0:99:29:29:1058:0:0:0,-8.72987,-10 0/0:63.1223:17:17:637:0:0:0,-5.11751,-10 0/0:33.0193:7:7:266:0:0:0,-2.10721,-10 0/0:93.2247:27:27:976:0:0:0,-8.12781,-10 0/0:48.0708:12:12:440:0:0:0,-3.61236,-10 0/0:90.2147:26:26:931:0:0:0,-7.82678,-10 0/0:33.0193:7:7:244:0:0:0,-2.10721,-10 0/0:39.0399:9:9:328:0:0:0,-2.70927,-10 0/0:37.6963:25:24:849:1:38:0,-2.32781,-10 0/0:17.9678:2:2:69:0:0:0,-0.60206,-6.555 0/0:48.0708:12:12:453:0:0:0,-3.61236,-10 0/0:33.0193:8:7:266:0:0:0,-2.10721,-10 0/0:48.0708:12:12:439:0:0:0,-3.61236,-10 0/0:42.0502:10:10:379:0:0:0,-3.0103,-10 0/0:81.184:23:23:858:0:0:0,-6.92369,-10 0/1:0.0104688:8:0:0:8:281:-10,-2.40824,0 0/0:51.0811:13:13:484:0:0:0,-3.91339,-10 0/0:60.112:16:16:598:0:0:0,-4.81648,-10 0/0:36.0296:8:8:302:0:0:0,-2.40824,-10 0/0:99:35:35:1296:0:0:0,-10,-10 0/0:69.1429:19:19:685:0:0:0,-5.71957,-10 0/0:42.0502:10:10:375:0:0:0,-3.0103,-10 0/1:99:21:11:408:10:349:-10,0,-10 0/0:39.0399:9:9:339:0:0:0,-2.70927,-10 0/0:60.112:16:16:594:0:0:0,-4.81648,-10 0/0:60.112:16:16:569:0:0:0,-4.81648,-10 0/0:57.1017:15:15:569:0:0:0,-4.51545,-10 0/0:39.0399:9:9:330:0:0:0,-2.70927,-10 0/0:60.112:16:16:536:0:0:0,-4.81648,-10 0/0:45.0605:11:11:417:0:0:0,-3.31133,-10 0/0:48.0708:12:12:425:0:0:0,-3.61236,-10 0/0:36.0296:8:8:301:0:0:0,-2.40824,-10 0/0:14.9575:1:1:16:0:0:0,-0.30103,-1.6 0/0:48.0708:12:12:455:0:0:0,-3.61236,-10 0/0:90.2147:26:26:962:0:0:0,-7.82678,-10 0/0:78.1737:22:22:786:0:0:0,-6.62266,-10 0/0:48.0708:12:12:424:0:0:0,-3.61236,-10 0/0:66.1326:18:18:597:0:0:0,-5.41854,-10 0/0:78.1737:22:22:780:0:0:0,-6.62266,-10 0/0:17.9678:2:2:75:0:0:0,-0.60206,-7.125 0/0:48.0708:12:12:447:0:0:0,-3.61236,-10 0/0:42.0502:10:10:324:0:0:0,-3.0103,-10 0/0:30.009:6:6:223:0:0:0,-1.80618,-10 0/0:66.1326:18:18:651:0:0:0,-5.41854,-10 0/0:57.1017:15:15:557:0:0:0,-4.51545,-10 0/0:36.0296:8:8:302:0:0:0,-2.40824,-10 scaffold_293 420718 . G C 509.587 . AB=0.777778;ABP=21.1059;AC=2;AF=0.0108696;AN=184;AO=22;CIGAR=1X;DP=1385;DPB=1385;DPRA=1.15729;EPP=6.56362;EPPR=3.0119;GTI=1;LEN=1;MEANALT=1;MQM=59.7727;MQMR=59.9139;NS=92;NUMALT=1;ODDS=6.27289;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=809;QR=49508;RO=1359;RPP=50.7827;RPPR=2893.55;RUN=1;SAF=8;SAP=6.56362;SAR=14;SRF=687;SRP=3.36982;SRR=672;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.3616:10:10:366:0:0:0,-3.0103,-10 0/0:48.3616:10:10:377:0:0:0,-3.0103,-10 0/0:69.4337:17:17:621:0:0:0,-5.11751,-10 0/0:54.3822:12:12:448:0:0:0,-3.61236,-10 0/0:63.4131:15:15:565:0:0:0,-4.51545,-10 0/0:39.3307:7:7:259:0:0:0,-2.10721,-10 0/0:96.5245:26:26:948:0:0:0,-7.82678,-10 0/0:84.4851:22:22:835:0:0:0,-6.62266,-10 0/0:54.3822:12:12:435:0:0:0,-3.61236,-10 0/0:27.2895:3:3:114:0:0:0,-0.90309,-10 0/0:39.3307:7:7:254:0:0:0,-2.10721,-10 0/0:36.3204:6:6:228:0:0:0,-1.80618,-10 0/0:99:29:29:1038:0:0:0,-8.72987,-10 0/0:78.4646:20:20:744:0:0:0,-6.0206,-10 0/0:99:27:27:966:0:0:0,-8.12781,-10 0/0:84.4851:22:22:780:0:0:0,-6.62266,-10 0/0:90.5053:24:24:822:0:0:0,-7.22472,-10 0/0:51.3719:11:11:416:0:0:0,-3.31133,-10 0/0:57.3925:13:13:479:0:0:0,-3.91339,-10 0/0:99:31:31:1118:0:0:0,-9.33193,-10 0/0:72.444:18:18:642:0:0:0,-5.41854,-10 0/0:96.5245:26:26:960:0:0:0,-7.82678,-10 0/0:33.3101:5:5:167:0:0:0,-1.50515,-10 0/0:66.4234:16:16:600:0:0:0,-4.81648,-10 0/0:72.444:18:18:673:0:0:0,-5.41854,-10 0/0:90.5053:24:24:876:0:0:0,-7.22472,-10 0/0:72.444:18:18:661:0:0:0,-5.41854,-10 0/0:45.3513:9:9:331:0:0:0,-2.70927,-10 0/0:57.3925:13:13:457:0:0:0,-3.91339,-10 0/0:72.444:18:18:675:0:0:0,-5.41854,-10 0/0:30.2998:4:4:143:0:0:0,-1.20412,-10 0/0:45.3513:9:9:340:0:0:0,-2.70927,-10 0/0:60.4028:14:14:475:0:0:0,-4.21442,-10 0/0:63.4131:15:15:568:0:0:0,-4.51545,-10 0/0:42.341:9:8:303:0:0:0,-2.40824,-10 0/0:45.3513:9:9:330:0:0:0,-2.70927,-10 0/0:39.3307:7:7:265:0:0:0,-2.10721,-10 0/0:66.4234:16:16:599:0:0:0,-4.81648,-10 0/0:57.3925:13:13:490:0:0:0,-3.91339,-10 0/0:45.3513:9:9:332:0:0:0,-2.70927,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 0/0:57.3925:13:13:493:0:0:0,-3.91339,-10 0/0:63.4131:15:15:566:0:0:0,-4.51545,-10 0/0:60.4028:14:14:462:0:0:0,-4.21442,-10 0/0:69.4337:17:17:625:0:0:0,-5.11751,-10 0/0:39.3307:7:7:266:0:0:0,-2.10721,-10 0/0:99:41:41:1481:0:0:0,-10,-10 0/0:72.444:18:18:627:0:0:0,-5.41854,-10 0/0:69.4337:17:17:602:0:0:0,-5.11751,-10 0/0:63.4131:15:15:567:0:0:0,-4.51545,-10 0/0:45.3513:9:9:322:0:0:0,-2.70927,-10 0/0:78.4646:21:20:745:0:0:0,-6.0206,-10 0/0:60.4028:14:14:494:0:0:0,-4.21442,-10 0/0:30.2998:4:4:122:0:0:0,-1.20412,-10 0/0:99:42:41:1524:0:0:0,-10,-10 0/0:33.3101:5:5:183:0:0:0,-1.50515,-10 0/0:54.3822:12:12:426:0:0:0,-3.61236,-10 0/0:39.3307:7:7:266:0:0:0,-2.10721,-10 0/0:42.341:8:8:304:0:0:0,-2.40824,-10 0/0:36.3204:6:6:228:0:0:0,-1.80618,-10 0/0:81.4749:21:21:773:0:0:0,-6.32163,-10 0/0:63.4131:15:15:570:0:0:0,-4.51545,-10 0/0:78.4646:20:20:724:0:0:0,-6.0206,-10 0/0:70.541:25:24:866:1:14:0,-4.72781,-10 0/0:33.3101:5:5:188:0:0:0,-1.50515,-10 0/0:54.3822:12:12:395:0:0:0,-3.61236,-10 0/0:75.4543:19:19:661:0:0:0,-5.71957,-10 0/0:39.3307:7:7:244:0:0:0,-2.10721,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:48.3616:10:10:355:0:0:0,-3.0103,-10 0/0:51.3719:11:11:414:0:0:0,-3.31133,-10 0/0:69.4337:17:17:644:0:0:0,-5.11751,-10 0/0:66.4234:16:16:574:0:0:0,-4.81648,-10 0/0:60.4028:14:14:526:0:0:0,-4.21442,-10 0/0:99:27:27:1018:0:0:0,-8.12781,-10 0/0:45.3513:9:9:302:0:0:0,-2.70927,-10 0/0:69.4337:18:17:596:0:0:0,-5.11751,-10 0/1:0.00484119:13:0:0:13:491:-10,-3.91339,0 0/0:27.2895:3:3:107:0:0:0,-0.90309,-9.98667 0/0:45.3513:9:9:329:0:0:0,-2.70927,-10 0/0:99:32:32:1183:0:0:0,-9.63296,-10 0/0:90.5053:24:24:883:0:0:0,-7.22472,-10 0/1:99:14:6:228:8:304:-10,0,-10 0/0:63.4131:15:15:530:0:0:0,-4.51545,-10 0/0:57.3925:13:13:435:0:0:0,-3.91339,-10 0/0:33.3101:5:5:180:0:0:0,-1.50515,-10 0/0:60.4028:14:14:507:0:0:0,-4.21442,-10 0/0:42.341:8:8:300:0:0:0,-2.40824,-10 0/0:33.3101:5:5:174:0:0:0,-1.50515,-10 0/0:51.3719:11:11:407:0:0:0,-3.31133,-10 0/0:63.4131:15:15:516:0:0:0,-4.51545,-10 0/0:63.4131:15:15:524:0:0:0,-4.51545,-10 scaffold_293 452169 . C T 145.43 . AB=0.411765;ABP=4.1599;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1313;DPB=1313;DPRA=1.59524;EPP=9.04217;EPPR=4.414;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9939;NS=92;NUMALT=1;ODDS=9.57116;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=46835;RO=1301;RPP=22.5536;RPPR=2767.62;RUN=1;SAF=7;SAP=9.04217;SAR=2;SRF=643;SRP=3.38584;SRR=658;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.6302:8:8:290:0:0:0,-2.40824,-10 0/0:68.6611:11:11:392:0:0:0,-3.31133,-10 0/0:59.6302:8:8:304:0:0:0,-2.40824,-10 0/0:56.6199:7:7:266:0:0:0,-2.10721,-10 0/0:65.6508:10:10:342:0:0:0,-3.0103,-10 0/0:62.6405:9:9:308:0:0:0,-2.70927,-10 0/0:99:33:32:1090:1:16:0,-6.81548,-10 0/0:99:22:22:823:0:0:0,-6.62266,-10 0/0:56.6199:7:7:262:0:0:0,-2.10721,-10 0/0:44.5787:3:3:114:0:0:0,-0.90309,-10 0/0:53.6096:6:6:228:0:0:0,-1.80618,-10 0/0:50.5993:5:5:188:0:0:0,-1.50515,-10 0/0:83.7125:16:16:521:0:0:0,-4.81648,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:99:29:29:1016:0:0:0,-8.72987,-10 0/0:77.692:14:14:530:0:0:0,-4.21442,-10 0/0:74.6817:13:13:476:0:0:0,-3.91339,-10 0/0:62.6405:9:9:315:0:0:0,-2.70927,-10 0/0:80.7023:15:15:545:0:0:0,-4.51545,-10 0/0:99:25:25:900:0:0:0,-7.52575,-10 0/0:65.6508:10:10:380:0:0:0,-3.0103,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:68.6611:11:11:384:0:0:0,-3.31133,-10 0/0:74.6817:13:13:484:0:0:0,-3.91339,-10 0/0:80.7023:15:15:545:0:0:0,-4.51545,-10 0/0:95.7528:20:20:746:0:0:0,-6.0206,-10 0/0:62.6405:9:9:335:0:0:0,-2.70927,-10 0/0:68.6611:11:11:415:0:0:0,-3.31133,-10 0/0:42.4499:17:16:582:1:36:0,-0.287061,-10 0/0:99:25:25:904:0:0:0,-7.52575,-10 0/0:53.6096:6:6:221:0:0:0,-1.80618,-10 0/0:53.6096:6:6:203:0:0:0,-1.80618,-10 0/0:71.6714:12:12:408:0:0:0,-3.61236,-10 0/0:59.6302:8:8:266:0:0:0,-2.40824,-10 0/0:86.7228:17:17:586:0:0:0,-5.11751,-10 0/0:44.5787:3:3:113:0:0:0,-0.90309,-10 0/0:53.6096:6:6:228:0:0:0,-1.80618,-10 0/0:95.7528:20:20:724:0:0:0,-6.0206,-10 0/0:65.6508:10:10:379:0:0:0,-3.0103,-10 0/0:65.6508:10:10:326:0:0:0,-3.0103,-10 0/0:99:28:28:1008:0:0:0,-8.42884,-10 0/0:74.6817:13:13:489:0:0:0,-3.91339,-10 0/0:83.7125:16:16:593:0:0:0,-4.81648,-10 0/0:98.7621:21:21:770:0:0:0,-6.32163,-10 0/0:89.733:18:18:618:0:0:0,-5.41854,-10 0/0:80.7023:15:15:566:0:0:0,-4.51545,-10 0/0:99:25:25:931:0:0:0,-7.52575,-10 0/0:83.7125:16:16:563:0:0:0,-4.81648,-10 0/0:74.6817:13:13:465:0:0:0,-3.91339,-10 0/0:99:28:28:974:0:0:0,-8.42884,-10 0/0:74.6817:13:13:443:0:0:0,-3.91339,-10 0/0:95.7528:20:20:720:0:0:0,-6.0206,-10 0/0:71.6714:12:12:443:0:0:0,-3.61236,-10 0/0:59.6302:8:8:295:0:0:0,-2.40824,-10 0/0:99:32:32:1128:0:0:0,-9.63296,-10 0/0:65.6508:10:10:349:0:0:0,-3.0103,-10 0/0:62.6405:9:9:332:0:0:0,-2.70927,-10 0/0:62.6405:9:9:304:0:0:0,-2.70927,-10 0/0:59.6302:8:8:267:0:0:0,-2.40824,-10 0/0:53.6096:6:6:197:0:0:0,-1.80618,-10 0/0:92.743:19:19:692:0:0:0,-5.71957,-10 0/0:80.7023:15:15:530:0:0:0,-4.51545,-10 0/0:98.7621:21:21:741:0:0:0,-6.32163,-10 0/1:99:17:10:350:7:264:-10,0,-10 0/0:77.692:14:14:480:0:0:0,-4.21442,-10 0/0:99:27:27:1001:0:0:0,-8.12781,-10 0/0:71.6714:12:12:425:0:0:0,-3.61236,-10 0/0:56.6199:8:7:237:0:0:0,-2.10721,-10 0/0:99:33:33:1240:0:0:0,-9.93399,-10 0/0:77.692:14:14:500:0:0:0,-4.21442,-10 0/0:99:24:24:856:0:0:0,-7.22472,-10 0/0:80.7023:15:15:564:0:0:0,-4.51545,-10 0/0:74.6817:13:13:472:0:0:0,-3.91339,-10 0/0:71.6714:12:12:443:0:0:0,-3.61236,-10 0/0:68.6611:11:11:395:0:0:0,-3.31133,-10 0/0:77.692:14:14:487:0:0:0,-4.21442,-10 0/0:89.733:18:18:610:0:0:0,-5.41854,-10 0/0:56.6199:7:7:266:0:0:0,-2.10721,-10 0/0:41.5684:2:2:70:0:0:0,-0.60206,-6.65 0/0:65.6508:10:10:360:0:0:0,-3.0103,-10 0/0:99:25:25:922:0:0:0,-7.52575,-10 0/0:83.7125:16:16:595:0:0:0,-4.81648,-10 0/0:74.6817:13:13:449:0:0:0,-3.91339,-10 0/0:92.743:19:19:693:0:0:0,-5.71957,-10 0/0:68.6611:12:11:410:0:0:0,-3.31133,-10 0/0:44.5787:4:3:104:0:0:0,-0.90309,-9.515 0/0:68.6611:11:11:411:0:0:0,-3.31133,-10 0/0:65.6508:10:10:342:0:0:0,-3.0103,-10 0/0:44.5787:3:3:114:0:0:0,-0.90309,-10 0/0:62.6405:9:9:333:0:0:0,-2.70927,-10 0/0:83.7125:16:16:571:0:0:0,-4.81648,-10 0/0:77.692:14:14:520:0:0:0,-4.21442,-10 scaffold_293 452200 . C T 120.349 . AB=0.461538;ABP=3.17734;AC=1;AF=0.00543478;AN=184;AO=6;CIGAR=1X;DP=1307;DPB=1307;DPRA=0.914219;EPP=3.0103;EPPR=3.81876;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9938;NS=92;NUMALT=1;ODDS=10.2588;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=225;QR=47532;RO=1300;RPP=16.0391;RPPR=2817.25;RUN=1;SAF=3;SAP=3.0103;SAR=3;SRF=638;SRP=3.97243;SRR=662;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.6159:8:8:280:0:0:0,-2.40824,-10 0/0:71.6467:11:11:416:0:0:0,-3.31133,-10 0/0:62.6159:8:8:296:0:0:0,-2.40824,-10 0/0:59.6056:7:7:265:0:0:0,-2.10721,-10 0/0:68.6365:10:10:356:0:0:0,-3.0103,-10 0/0:65.6262:9:9:341:0:0:0,-2.70927,-10 0/0:99:33:33:1208:0:0:0,-9.93399,-10 0/0:99:22:22:822:0:0:0,-6.62266,-10 0/0:59.6056:7:7:262:0:0:0,-2.10721,-10 0/0:47.5644:3:3:107:0:0:0,-0.90309,-9.98667 0/0:59.6056:7:7:266:0:0:0,-2.10721,-10 0/0:53.585:5:5:176:0:0:0,-1.50515,-10 0/0:86.6981:16:16:575:0:0:0,-4.81648,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:99:29:29:1069:0:0:0,-8.72987,-10 0/0:80.6776:14:14:530:0:0:0,-4.21442,-10 0/0:77.6673:13:13:469:0:0:0,-3.91339,-10 0/0:65.6262:9:9:302:0:0:0,-2.70927,-10 0/0:83.6879:15:15:569:0:0:0,-4.51545,-10 0/0:99:25:25:889:0:0:0,-7.52575,-10 0/0:68.6365:10:10:377:0:0:0,-3.0103,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:71.6467:11:11:374:0:0:0,-3.31133,-10 0/0:77.6673:13:13:484:0:0:0,-3.91339,-10 0/0:83.6879:15:15:536:0:0:0,-4.51545,-10 0/0:98.7402:20:20:753:0:0:0,-6.0206,-10 0/0:65.6262:9:9:342:0:0:0,-2.70927,-10 0/0:71.6467:11:11:407:0:0:0,-3.31133,-10 0/0:89.7082:17:17:608:0:0:0,-5.11751,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:56.5953:6:6:217:0:0:0,-1.80618,-10 0/0:56.5953:6:6:204:0:0:0,-1.80618,-10 0/0:74.657:12:12:428:0:0:0,-3.61236,-10 0/0:62.6159:8:8:270:0:0:0,-2.40824,-10 0/0:89.7082:17:17:622:0:0:0,-5.11751,-10 0/0:47.5644:3:3:114:0:0:0,-0.90309,-10 0/0:56.5953:6:6:224:0:0:0,-1.80618,-10 0/0:99:21:21:743:0:0:0,-6.32163,-10 0/0:68.6365:10:10:377:0:0:0,-3.0103,-10 0/0:65.6262:9:9:318:0:0:0,-2.70927,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:77.6673:13:13:482:0:0:0,-3.91339,-10 0/0:86.6981:16:16:606:0:0:0,-4.81648,-10 0/0:99:21:21:739:0:0:0,-6.32163,-10 0/0:92.7181:18:18:650:0:0:0,-5.41854,-10 0/0:83.6879:15:15:557:0:0:0,-4.51545,-10 0/0:99:25:25:927:0:0:0,-7.52575,-10 0/0:86.6981:16:16:600:0:0:0,-4.81648,-10 0/0:77.6673:13:13:493:0:0:0,-3.91339,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:77.6673:13:13:479:0:0:0,-3.91339,-10 0/0:98.7402:20:20:754:0:0:0,-6.0206,-10 0/0:74.657:12:12:452:0:0:0,-3.61236,-10 0/0:62.6159:8:8:290:0:0:0,-2.40824,-10 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:68.6365:10:10:357:0:0:0,-3.0103,-10 0/0:65.6262:9:9:342:0:0:0,-2.70927,-10 0/0:65.6262:9:9:331:0:0:0,-2.70927,-10 0/0:62.6159:8:8:286:0:0:0,-2.40824,-10 0/0:56.5953:6:6:228:0:0:0,-1.80618,-10 0/0:95.7277:19:19:678:0:0:0,-5.71957,-10 0/0:83.6879:15:15:540:0:0:0,-4.51545,-10 0/0:99:21:21:779:0:0:0,-6.32163,-10 0/0:89.7082:17:17:595:0:0:0,-5.11751,-10 0/0:80.6776:14:14:498:0:0:0,-4.21442,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:74.657:12:12:450:0:0:0,-3.61236,-10 0/0:62.6159:8:8:291:0:0:0,-2.40824,-10 0/0:99:32:32:1207:0:0:0,-9.63296,-10 0/0:77.6673:13:13:464:0:0:0,-3.91339,-10 0/0:99:24:24:872:0:0:0,-7.22472,-10 0/0:80.6776:14:14:524:0:0:0,-4.21442,-10 0/1:99:13:7:266:6:225:-10,0,-10 0/0:74.657:12:12:435:0:0:0,-3.61236,-10 0/0:68.6365:11:10:356:0:0:0,-3.0103,-10 0/0:80.6776:14:14:506:0:0:0,-4.21442,-10 0/0:92.7181:18:18:645:0:0:0,-5.41854,-10 0/0:59.6056:7:7:252:0:0:0,-2.10721,-10 0/0:44.5541:2:2:76:0:0:0,-0.60206,-7.22 0/0:71.6467:11:11:381:0:0:0,-3.31133,-10 0/0:99:24:24:864:0:0:0,-7.22472,-10 0/0:86.6981:16:16:601:0:0:0,-4.81648,-10 0/0:77.6673:13:13:482:0:0:0,-3.91339,-10 0/0:95.7277:19:19:706:0:0:0,-5.71957,-10 0/0:68.6365:10:10:366:0:0:0,-3.0103,-10 0/0:50.5747:4:4:114:0:0:0,-1.20412,-10 0/0:71.6467:11:11:380:0:0:0,-3.31133,-10 0/0:65.6262:9:9:326:0:0:0,-2.70927,-10 0/0:47.5644:3:3:114:0:0:0,-0.90309,-10 0/0:65.6262:9:9:342:0:0:0,-2.70927,-10 0/0:86.6981:16:16:598:0:0:0,-4.81648,-10 0/0:80.6776:14:14:519:0:0:0,-4.21442,-10 scaffold_293 523611 . T C 310.872 . AB=0.393939;ABP=6.23461;AC=1;AF=0.00543478;AN=184;AO=14;CIGAR=1X;DP=1779;DPB=1779;DPRA=1.11463;EPP=3.0103;EPPR=5.61804;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=2.86238;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=499;QR=64727;RO=1762;RPP=25.3454;RPPR=2275.74;RUN=1;SAF=6;SAP=3.63072;SAR=8;SRF=884;SRP=3.05467;SRR=878;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.8142:11:11:342:0:0:0,-3.31133,-10 0/0:55.7936:9:9:320:0:0:0,-2.70927,-10 0/0:97.9351:23:23:828:0:0:0,-6.92369,-10 0/0:73.8554:15:15:538:0:0:0,-4.51545,-10 0/0:88.9069:20:20:756:0:0:0,-6.0206,-10 0/0:67.8348:13:13:463:0:0:0,-3.91339,-10 0/0:99:41:41:1508:0:0:0,-10,-10 0/0:99:31:31:1141:0:0:0,-9.33193,-10 0/0:88.9069:20:20:737:0:0:0,-6.0206,-10 0/0:49.773:7:7:258:0:0:0,-2.10721,-10 0/0:52.7833:8:8:299:0:0:0,-2.40824,-10 0/0:40.7421:4:4:152:0:0:0,-1.20412,-10 0/0:99:40:40:1491:0:0:0,-10,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:82.8862:18:18:664:0:0:0,-5.41854,-10 0/0:99:26:25:894:0:0:0,-7.52575,-10 0/0:99:31:31:1131:0:0:0,-9.33193,-10 0/0:46.7627:6:6:212:0:0:0,-1.80618,-10 0/0:79.8759:17:17:641:0:0:0,-5.11751,-10 0/0:99:46:46:1736:0:0:0,-10,-10 0/0:99:25:25:939:0:0:0,-7.52575,-10 0/0:79.8759:17:17:635:0:0:0,-5.11751,-10 0/0:43.7524:5:5:187:0:0:0,-1.50515,-10 0/0:79.8759:17:17:616:0:0:0,-5.11751,-10 0/0:82.8862:18:18:655:0:0:0,-5.41854,-10 0/0:97.9351:23:23:846:0:0:0,-6.92369,-10 0/0:82.8862:18:18:661:0:0:0,-5.41854,-10 0/0:73.8554:15:15:564:0:0:0,-4.51545,-10 0/0:67.8348:13:13:468:0:0:0,-3.91339,-10 0/0:99:36:36:1287:0:0:0,-10,-10 0/0:61.8142:11:11:387:0:0:0,-3.31133,-10 0/0:31.7112:1:1:38:0:0:0,-0.30103,-3.8 0/0:67.8348:13:13:481:0:0:0,-3.91339,-10 0/0:43.7524:5:5:161:0:0:0,-1.50515,-10 0/0:99:24:24:910:0:0:0,-7.22472,-10 0/0:40.7421:4:4:152:0:0:0,-1.20412,-10 0/0:58.8039:10:10:373:0:0:0,-3.0103,-10 0/0:99:32:31:1158:0:0:0,-9.33193,-10 0/0:79.8759:17:17:641:0:0:0,-5.11751,-10 0/0:70.8451:14:14:496:0:0:0,-4.21442,-10 0/0:99:27:27:984:0:0:0,-8.12781,-10 0/0:85.8964:20:19:715:0:0:0,-5.71957,-10 0/0:55.7936:9:9:320:0:0:0,-2.70927,-10 0/0:99:33:33:1253:0:0:0,-9.93399,-10 0/0:76.8657:16:16:594:0:0:0,-4.81648,-10 0/0:82.8862:18:18:659:0:0:0,-5.41854,-10 0/0:99:45:45:1648:0:0:0,-10,-10 0/0:91.9173:21:21:761:0:0:0,-6.32163,-10 0/0:73.8554:15:15:549:0:0:0,-4.51545,-10 0/0:99:40:40:1420:0:0:0,-10,-10 0/0:82.8862:18:18:664:0:0:0,-5.41854,-10 0/0:99:24:24:907:0:0:0,-7.22472,-10 0/0:49.773:7:7:257:0:0:0,-2.10721,-10 0/0:58.8039:10:10:355:0:0:0,-3.0103,-10 0/0:99:31:31:1123:0:0:0,-9.33193,-10 0/0:73.8554:15:15:539:0:0:0,-4.51545,-10 0/0:99:33:33:1241:0:0:0,-9.93399,-10 0/0:73.8554:15:15:488:0:0:0,-4.51545,-10 0/0:67.8348:13:13:469:0:0:0,-3.91339,-10 0/0:70.8451:14:14:529:0:0:0,-4.21442,-10 0/0:99:30:30:1120:0:0:0,-9.0309,-10 0/0:85.8964:19:19:689:0:0:0,-5.71957,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:85.8964:19:19:708:0:0:0,-5.71957,-10 0/0:73.8554:15:15:533:0:0:0,-4.51545,-10 0/0:99:35:35:1297:0:0:0,-10,-10 0/0:82.8862:18:18:679:0:0:0,-5.41854,-10 0/0:55.7936:9:9:342:0:0:0,-2.70927,-10 0/0:99:35:35:1216:0:0:0,-10,-10 0/0:52.7833:8:8:303:0:0:0,-2.40824,-10 0/0:97.9351:23:23:828:0:0:0,-6.92369,-10 0/1:99:33:20:720:13:461:-10,0,-10 0/0:76.8657:16:16:604:0:0:0,-4.81648,-10 0/0:82.8862:18:18:683:0:0:0,-5.41854,-10 0/0:88.9069:20:20:736:0:0:0,-6.0206,-10 0/0:64.8245:12:12:454:0:0:0,-3.61236,-10 0/0:70.8451:14:14:496:0:0:0,-4.21442,-10 0/0:82.8862:18:18:671:0:0:0,-5.41854,-10 0/0:52.7833:8:8:296:0:0:0,-2.40824,-10 0/0:61.8142:11:11:409:0:0:0,-3.31133,-10 0/0:99:35:35:1318:0:0:0,-10,-10 0/0:79.8759:17:17:639:0:0:0,-5.11751,-10 0/0:88.9069:20:20:726:0:0:0,-6.0206,-10 0/0:99:35:35:1296:0:0:0,-10,-10 0/0:97.9351:23:23:857:0:0:0,-6.92369,-10 0/0:0.241037:10:9:339:1:38:-1.7897,0,-10 0/0:79.8759:17:17:627:0:0:0,-5.11751,-10 0/0:70.8451:14:14:509:0:0:0,-4.21442,-10 0/0:43.7524:5:5:186:0:0:0,-1.50515,-10 0/0:70.8451:14:14:484:0:0:0,-4.21442,-10 0/0:94.9262:22:22:823:0:0:0,-6.62266,-10 0/0:85.8964:19:19:718:0:0:0,-5.71957,-10 scaffold_297 266707 . T C 9012.98 . AB=0.596685;ABP=17.7067;AC=32;AF=0.173913;AN=184;AO=327;CIGAR=1X;DP=1821;DPB=1821;DPRA=1.01337;EPP=14.1731;EPPR=6.64883;GTI=2;LEN=1;MEANALT=1;MQM=59.7401;MQMR=59.9685;NS=92;NUMALT=1;ODDS=0.444603;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=11959;QR=55218;RO=1492;RPP=704.422;RPPR=3216.84;RUN=1;SAF=185;SAP=15.2887;SAR=142;SRF=774;SRP=7.57447;SRR=718;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:39.7109:13:13:489:0:0:0,-3.91339,-10 0/0:30.68:10:10:376:0:0:0,-3.0103,-10 0/0:45.7315:15:15:563:0:0:0,-4.51545,-10 0/0:36.7006:12:12:455:0:0:0,-3.61236,-10 0/0:39.7109:13:13:485:0:0:0,-3.91339,-10 0/0:48.7418:16:16:583:0:0:0,-4.81648,-10 0/0:99:40:40:1428:0:0:0,-10,-10 0/0:60.783:20:20:723:0:0:0,-6.0206,-10 0/0:45.7315:16:15:569:0:0:0,-4.51545,-10 0/0:24.6594:8:8:291:0:0:0,-2.40824,-10 0/0:24.6594:8:8:291:0:0:0,-2.40824,-10 0/0:9.60792:3:3:113:0:0:0,-0.90309,-10 0/0:90.8858:30:30:1078:0:0:0,-9.0309,-10 0/0:99:35:35:1324:0:0:0,-10,-10 0/0:99:37:37:1367:0:0:0,-10,-10 0/0:78.8447:26:26:977:0:0:0,-7.82678,-10 0/0:93.8935:31:31:1152:0:0:0,-9.33193,-10 0/0:27.6697:9:9:319:0:0:0,-2.70927,-10 0/0:48.7418:16:16:561:0:0:0,-4.81648,-10 0/0:96.9058:32:32:1159:0:0:0,-9.63296,-10 0/1:99:18:7:264:11:387:-10,0,-10 0/0:99:36:36:1346:0:0:0,-10,-10 0/1:0.991145:11:0:0:11:379:-10,-3.31133,0 0/1:99:25:12:454:13:494:-10,0,-10 0/0:54.7624:18:18:647:0:0:0,-5.41854,-10 0/0:90.8858:31:30:1114:0:0:0,-9.0309,-10 0/0:36.7006:12:12:455:0:0:0,-3.61236,-10 0/0:39.7109:13:13:469:0:0:0,-3.91339,-10 1/1:21.6849:16:0:0:16:605:-10,-4.81648,0 0/0:96.9058:32:32:1193:0:0:0,-9.63296,-10 0/1:0.227396:9:0:0:9:339:-10,-2.70927,0 0/0:36.7006:12:12:442:0:0:0,-3.61236,-10 0/0:39.7109:13:13:494:0:0:0,-3.91339,-10 0/0:39.7109:13:13:485:0:0:0,-3.91339,-10 0/0:45.7315:15:15:566:0:0:0,-4.51545,-10 1/1:15.6643:14:0:0:14:522:-10,-4.21442,0 0/0:48.7418:16:16:598:0:0:0,-4.81648,-10 0/0:72.8242:24:24:885:0:0:0,-7.22472,-10 0/0:66.8036:22:22:821:0:0:0,-6.62266,-10 0/0:36.7006:12:12:449:0:0:0,-3.61236,-10 0/0:72.8242:24:24:898:0:0:0,-7.22472,-10 0/0:42.7212:14:14:519:0:0:0,-4.21442,-10 0/0:45.7315:15:15:570:0:0:0,-4.51545,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/0:54.7624:18:18:661:0:0:0,-5.41854,-10 0/1:99:13:7:266:6:225:-10,0,-10 0/1:99:36:16:593:20:718:-10,0,-10 1/1:39.7467:22:0:0:22:782:-10,-6.62266,0 1/1:33.7261:20:0:0:20:732:-10,-6.0206,0 0/0:99:38:38:1404:0:0:0,-10,-10 0/0:36.7006:12:12:447:0:0:0,-3.61236,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:18.6388:6:6:205:0:0:0,-1.80618,-10 0/0:21.6491:7:7:256:0:0:0,-2.10721,-10 0/1:99:50:22:819:28:991:-10,0,-10 0/0:24.6594:8:8:304:0:0:0,-2.40824,-10 0/1:99:19:9:341:10:378:-10,0,-10 0/0:33.6903:11:11:399:0:0:0,-3.31133,-10 0/0:75.8345:25:25:916:0:0:0,-7.52575,-10 0/0:12.6182:4:4:148:0:0:0,-1.20412,-10 0/0:99:40:40:1472:0:0:0,-10,-10 0/0:48.7418:16:16:607:0:0:0,-4.81648,-10 0/0:99:38:38:1415:0:0:0,-10,-10 0/0:54.7624:18:18:678:0:0:0,-5.41854,-10 0/0:45.7315:15:15:559:0:0:0,-4.51545,-10 0/0:96.9058:32:32:1178:0:0:0,-9.63296,-10 0/0:54.7624:18:18:678:0:0:0,-5.41854,-10 0/0:42.7212:14:14:523:0:0:0,-4.21442,-10 0/0:96.9058:32:32:1165:0:0:0,-9.63296,-10 0/0:36.7006:12:12:432:0:0:0,-3.61236,-10 1/1:15.6643:14:0:0:14:505:-10,-4.21442,0 1/1:51.7879:26:0:0:26:984:-10,-7.82678,0 1/1:54.7982:27:0:0:27:992:-10,-8.12781,0 1/1:24.6952:17:0:0:17:617:-10,-5.11751,0 1/1:39.7467:22:0:0:22:835:-10,-6.62266,0 0/0:39.7109:13:13:463:0:0:0,-3.91339,-10 0/0:45.7315:15:15:562:0:0:0,-4.51545,-10 0/0:39.7109:13:13:487:0:0:0,-3.91339,-10 0/0:27.6697:9:9:342:0:0:0,-2.70927,-10 1/1:15.6643:14:0:0:14:511:-10,-4.21442,0 0/0:99:43:43:1604:0:0:0,-10,-10 0/0:96.9058:32:32:1209:0:0:0,-9.63296,-10 0/0:99:36:36:1350:0:0:0,-10,-10 0/0:60.783:20:20:754:0:0:0,-6.0206,-10 0/0:63.7933:21:21:798:0:0:0,-6.32163,-10 0/0:24.6594:8:8:276:0:0:0,-2.40824,-10 1/1:9.64369:12:0:0:12:425:-10,-3.61236,0 1/1:18.6746:15:0:0:15:538:-10,-4.51545,0 0/0:21.6491:7:7:264:0:0:0,-2.10721,-10 0/0:57.7727:19:19:689:0:0:0,-5.71957,-10 0/0:72.8242:24:24:868:0:0:0,-7.22472,-10 0/0:54.7624:18:18:658:0:0:0,-5.41854,-10 scaffold_297 266751 . A G 51749.2 . AB=0.554348;ABP=5.3706;AC=180;AF=0.978261;AN=184;AO=1754;CIGAR=1X;DP=1813;DPB=1813;DPRA=0;EPP=6.8927;EPPR=6.88793;GTI=1;LEN=1;MEANALT=1.03297;MQM=59.9413;MQMR=59.4821;NS=92;NUMALT=1;ODDS=0.557847;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63341;QR=1998;RO=56;RPP=3811.77;RPPR=124.613;RUN=1;SAF=905;SAP=6.8927;SAR=849;SRF=33;SRP=6.88793;SRR=23;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:55.9928:14:0:0:14:471:-10,-4.21442,0 1/1:24.6558:10:1:14:9:314:-10,-0.6103,0 1/1:59.0031:15:0:0:15:570:-10,-4.51545,0 1/1:49.9722:12:0:0:12:452:-10,-3.61236,0 1/1:52.9825:13:0:0:13:486:-10,-3.91339,0 1/1:36.0838:16:1:16:15:560:-10,-2.01236,0 1/1:99:39:0:0:39:1415:-10,-10,0 1/1:74.0546:20:0:0:20:756:-10,-6.0206,0 1/1:62.0134:16:0:0:16:576:-10,-4.81648,0 1/1:37.931:8:0:0:8:304:-10,-2.40824,0 1/1:40.9413:9:0:0:9:328:-10,-2.70927,0 1/1:22.8795:3:0:0:3:92:-8.58667,-0.90309,0 1/1:99:30:0:0:30:1085:-10,-9.0309,0 1/1:99:36:0:0:36:1281:-10,-10,0 1/1:99:37:0:0:37:1357:-10,-10,0 1/1:92.1155:26:0:0:26:921:-10,-7.82678,0 1/1:99:30:0:0:30:1080:-10,-9.0309,0 1/1:40.9413:9:0:0:9:336:-10,-2.70927,0 1/1:59.0031:15:0:0:15:545:-10,-4.51545,0 1/1:99:31:0:0:31:1145:-10,-9.33193,0 1/1:68.034:19:0:0:18:646:-10,-5.41854,0 1/1:99:36:0:0:36:1322:-10,-10,0 1/1:46.9619:11:0:0:11:392:-10,-3.31133,0 1/1:89.1056:25:0:0:25:917:-10,-7.52575,0 1/1:68.034:18:0:0:18:632:-10,-5.41854,0 1/1:74.3696:28:1:14:27:980:-10,-5.58168,0 1/1:49.9722:12:0:0:12:428:-10,-3.61236,0 1/1:55.9928:14:0:0:14:475:-10,-4.21442,0 1/1:62.0134:16:0:0:16:598:-10,-4.81648,0 1/1:99:31:0:0:31:1048:-10,-9.33193,0 1/1:37.931:8:0:0:8:294:-10,-2.40824,0 1/1:49.9722:12:0:0:12:430:-10,-3.61236,0 1/1:52.9825:13:0:0:13:492:-10,-3.91339,0 1/1:52.9825:13:0:0:13:488:-10,-3.91339,0 1/1:59.0031:15:0:0:15:566:-10,-4.51545,0 1/1:55.9928:14:0:0:14:468:-10,-4.21442,0 1/1:62.0134:16:0:0:16:594:-10,-4.81648,0 1/1:86.0955:24:0:0:24:878:-10,-7.22472,0 1/1:80.0751:22:0:0:22:813:-10,-6.62266,0 1/1:49.9722:12:0:0:12:404:-10,-3.61236,0 1/1:86.0955:24:0:0:24:902:-10,-7.22472,0 1/1:55.9928:14:0:0:14:486:-10,-4.21442,0 1/1:59.0031:15:0:0:15:556:-10,-4.51545,0 1/1:99:31:0:0:31:1126:-10,-9.33193,0 1/1:65.0237:17:0:0:17:596:-10,-5.11751,0 1/1:52.9825:13:0:0:13:491:-10,-3.91339,0 1/1:99:36:0:0:36:1248:-10,-10,0 1/1:77.0648:21:0:0:21:732:-10,-6.32163,0 1/1:74.0546:20:0:0:20:738:-10,-6.0206,0 1/1:99:38:0:0:38:1403:-10,-10,0 0/1:0.0640799:12:12:432:0:0:0,-3.61236,-10 1/1:99:33:0:0:33:1180:-10,-9.93399,0 1/1:31.9104:6:0:0:6:210:-10,-1.80618,0 1/1:34.9207:7:0:0:7:233:-10,-2.10721,0 1/1:99:50:0:0:50:1800:-10,-10,0 1/1:37.931:8:0:0:8:304:-10,-2.40824,0 1/1:71.0443:19:0:0:19:692:-10,-5.71957,0 1/1:46.9619:11:0:0:11:389:-10,-3.31133,0 1/1:89.1056:25:0:0:25:936:-10,-7.52575,0 1/1:25.8898:4:0:0:4:152:-10,-1.20412,0 1/1:99:41:0:0:41:1485:-10,-10,0 1/1:62.0134:16:0:0:16:584:-10,-4.81648,0 1/1:99:38:0:0:38:1417:-10,-10,0 1/1:68.034:18:0:0:18:676:-10,-5.41854,0 0/1:4.51347:14:1:38:13:490:-10,0,-0.731708 1/1:99:34:0:0:34:1193:-10,-10,0 1/1:68.034:18:0:0:18:656:-10,-5.41854,0 1/1:55.9928:14:0:0:14:510:-10,-4.21442,0 1/1:99:33:0:0:32:1131:-10,-9.63296,0 1/1:49.9722:12:0:0:12:432:-10,-3.61236,0 1/1:55.9928:14:0:0:14:528:-10,-4.21442,0 1/1:89.1056:25:0:0:25:923:-10,-7.52575,0 1/1:74.3696:28:1:14:27:912:-10,-5.58168,0 1/1:65.0237:17:0:0:17:619:-10,-5.11751,0 1/1:80.0751:22:0:0:22:794:-10,-6.62266,0 1/1:52.9825:13:0:0:13:469:-10,-3.91339,0 1/1:59.0031:15:0:0:15:546:-10,-4.51545,0 1/1:52.9825:13:0:0:13:481:-10,-3.91339,0 1/1:40.9413:9:0:0:9:335:-10,-2.70927,0 1/1:55.9928:14:0:0:14:490:-10,-4.21442,0 0/1:99:43:20:754:22:747:-10,0,-10 1/1:99:32:0:0:32:1195:-10,-9.63296,0 0/1:99:35:19:716:16:584:-10,0,-10 1/1:71.0443:19:0:0:19:693:-10,-5.71957,0 1/1:77.0648:21:0:0:21:767:-10,-6.32163,0 1/1:37.931:8:0:0:8:279:-10,-2.40824,0 1/1:49.9722:12:0:0:12:450:-10,-3.61236,0 1/1:59.0031:15:0:0:15:477:-10,-4.51545,0 1/1:34.9207:7:0:0:7:251:-10,-2.10721,0 1/1:71.0443:19:0:0:19:634:-10,-5.71957,0 1/1:86.0955:24:0:0:24:845:-10,-7.22472,0 1/1:68.034:18:0:0:18:635:-10,-5.41854,0 scaffold_297 460051 . C T 124.649 . AB=0.269231;ABP=15.0369;AC=1;AF=0.00549451;AN=182;AO=11;CIGAR=1X;DP=2176;DPB=2176;DPRA=1.10181;EPP=3.20771;EPPR=4.10256;GTI=0;LEN=1;MEANALT=1;MQM=59;MQMR=59.9413;NS=91;NUMALT=1;ODDS=13.286;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=341;QR=78469;RO=2165;RPP=26.8965;RPPR=4704.25;RUN=1;SAF=6;SAP=3.20771;SAR=5;SRF=1099;SRP=4.10256;SRR=1066;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:21:21:781:0:0:0,-6.32163,-10 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:99:24:24:904:0:0:0,-7.22472,-10 0/0:98.765:14:14:521:0:0:0,-4.21442,-10 0/0:99:15:15:568:0:0:0,-4.51545,-10 0/0:57.7003:17:16:605:1:38:0,-0.087061,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:99:20:20:734:0:0:0,-6.0206,-10 0/0:99:16:16:552:0:0:0,-4.81648,-10 0/0:80.7128:8:8:273:0:0:0,-2.40824,-10 0/0:74.6923:6:6:217:0:0:0,-1.80618,-10 0/0:89.7435:11:11:417:0:0:0,-3.31133,-10 0/0:99:31:30:1074:1:16:0,-6.24057,-10 0/0:99:51:51:1791:0:0:0,-10,-10 0/0:99:40:40:1416:0:0:0,-10,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:98.765:14:14:491:0:0:0,-4.21442,-10 0/1:99:26:19:713:7:255:-10,0,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:99:16:16:572:0:0:0,-4.81648,-10 0/0:99:39:39:1449:0:0:0,-10,-10 0/0:98.765:14:14:532:0:0:0,-4.21442,-10 0/0:99:19:19:692:0:0:0,-5.71957,-10 0/0:99:22:22:816:0:0:0,-6.62266,-10 0/0:99:36:36:1291:0:0:0,-10,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/0:99:15:15:558:0:0:0,-4.51545,-10 0/0:99:27:27:922:0:0:0,-8.12781,-10 0/0:99:43:43:1554:0:0:0,-10,-10 0/0:80.7128:8:8:302:0:0:0,-2.40824,-10 0/0:68.6717:4:4:152:0:0:0,-1.20412,-10 0/0:99:28:28:1028:0:0:0,-8.42884,-10 0/0:92.7535:12:12:450:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0/0:83.7231:9:9:313:0:0:0,-2.70927,-10 0/0:99:18:18:666:0:0:0,-5.41854,-10 0/0:99:36:36:1318:0:0:0,-10,-10 0/0:99:18:18:651:0:0:0,-5.41854,-10 0/0:92.7535:12:12:428:0:0:0,-3.61236,-10 0/0:99:35:34:1234:1:16:0,-7.39198,-10 0/0:92.7535:12:12:431:0:0:0,-3.61236,-10 0/0:80.7128:8:8:258:0:0:0,-2.40824,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:99:21:21:767:0:0:0,-6.32163,-10 0/0:99:60:60:2153:0:0:0,-10,-10 0/0:99:27:27:972:0:0:0,-8.12781,-10 0/0:99:19:19:694:0:0:0,-5.71957,-10 0/0:99:50:50:1713:0:0:0,-10,-10 0/0:89.7435:11:11:402:0:0:0,-3.31133,-10 0/0:99:37:37:1325:0:0:0,-10,-10 0/0:92.7535:12:12:445:0:0:0,-3.61236,-10 0/0:89.7435:11:11:413:0:0:0,-3.31133,-10 0/0:99:51:51:1890:0:0:0,-10,-10 0/0:98.765:14:14:490:0:0:0,-4.21442,-10 0/0:99:26:26:902:0:0:0,-7.82678,-10 0/0:89.7435:11:11:412:0:0:0,-3.31133,-10 0/0:99:17:17:619:0:0:0,-5.11751,-10 0/0:99:20:20:746:0:0:0,-6.0206,-10 0/0:99:38:38:1407:0:0:0,-10,-10 0/0:99:18:18:678:0:0:0,-5.41854,-10 0/0:99:44:44:1557:0:0:0,-10,-10 0/0:91.6934:22:21:741:1:16:0,-3.68024,-10 0/0:86.7333:10:10:372:0:0:0,-3.0103,-10 0/0:99:43:43:1578:0:0:0,-10,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:99:19:19:649:0:0:0,-5.71957,-10 0/0:99:36:36:1302:0:0:0,-10,-10 0/0:95.7633:13:13:479:0:0:0,-3.91339,-10 0/0:99:22:22:786:0:0:0,-6.62266,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:99:27:27:962:0:0:0,-8.12781,-10 0/0:99:29:29:1014:0:0:0,-8.72987,-10 0/0:99:49:49:1778:0:0:0,-10,-10 0/0:92.7535:12:12:425:0:0:0,-3.61236,-10 0/0:99:20:20:749:0:0:0,-6.0206,-10 0/0:99:19:19:680:0:0:0,-5.71957,-10 0/0:98.765:14:14:503:0:0:0,-4.21442,-10 0/0:99:15:15:518:0:0:0,-4.51545,-10 0/0:99:37:37:1364:0:0:0,-10,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:99:27:27:972:0:0:0,-8.12781,-10 0/0:99:29:29:1066:0:0:0,-8.72987,-10 0/0:99:29:29:1021:0:0:0,-8.72987,-10 0/0:92.7535:12:12:447:0:0:0,-3.61236,-10 0/0:99:35:35:1291:0:0:0,-10,-10 0/0:99:24:24:876:0:0:0,-7.22472,-10 0/0:65.6614:3:3:112:0:0:0,-0.90309,-10 0/0:99:17:17:646:0:0:0,-5.11751,-10 0/0:99:32:32:1139:0:0:0,-9.63296,-10 0/0:99:22:22:807:0:0:0,-6.62266,-10 scaffold_297 705948 . T C 4313 . AB=0.518519;ABP=3.57327;AC=17;AF=0.0923913;AN=184;AO=163;CIGAR=1X;DP=1505;DPB=1505;DPRA=1.35358;EPP=3.34335;EPPR=3.03619;GTI=0;LEN=1;MEANALT=1;MQM=59.6196;MQMR=59.962;NS=92;NUMALT=1;ODDS=0.821197;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5929;QR=49694;RO=1342;RPP=356.96;RPPR=2917.13;RUN=1;SAF=79;SAP=3.34335;SAR=84;SRF=669;SRP=3.03619;SRR=673;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:35.309:10:10:366:0:0:0,-3.0103,-10 0/0:44.3399:13:13:492:0:0:0,-3.91339,-10 0/0:53.3708:16:16:579:0:0:0,-4.81648,-10 0/0:35.309:10:10:369:0:0:0,-3.0103,-10 0/0:53.3708:16:16:602:0:0:0,-4.81648,-10 0/0:26.2781:7:7:266:0:0:0,-2.10721,-10 0/0:92.5032:29:29:1079:0:0:0,-8.72987,-10 0/0:50.3605:15:15:537:0:0:0,-4.51545,-10 0/0:41.3296:12:12:448:0:0:0,-3.61236,-10 0/0:17.2472:4:4:152:0:0:0,-1.20412,-10 0/0:26.2781:7:7:231:0:0:0,-2.10721,-10 1/1:8.32072:9:0:0:9:339:-10,-2.70927,0 0/1:99:30:15:564:15:530:-10,0,-10 0/0:59.3914:18:18:643:0:0:0,-5.41854,-10 0/0:59.3914:18:18:660:0:0:0,-5.41854,-10 0/1:99:27:8:303:19:683:-10,0,-10 0/0:89.4936:28:28:1058:0:0:0,-8.42884,-10 1/1:11.331:10:0:0:10:376:-10,-3.0103,0 0/0:59.3914:18:18:684:0:0:0,-5.41854,-10 0/0:98.5195:31:31:1167:0:0:0,-9.33193,-10 0/0:50.3605:15:15:564:0:0:0,-4.51545,-10 0/0:89.4936:28:28:1059:0:0:0,-8.42884,-10 0/0:29.2884:8:8:303:0:0:0,-2.40824,-10 0/0:68.4223:21:21:772:0:0:0,-6.32163,-10 0/0:26.2781:7:7:265:0:0:0,-2.10721,-10 0/0:59.3914:18:18:671:0:0:0,-5.41854,-10 0/0:32.2987:9:9:337:0:0:0,-2.70927,-10 0/0:47.3502:14:14:529:0:0:0,-4.21442,-10 0/0:44.3399:13:13:447:0:0:0,-3.91339,-10 0/0:99:40:40:1468:0:0:0,-10,-10 0/0:17.2472:4:4:150:0:0:0,-1.20412,-10 0/0:26.2781:7:7:261:0:0:0,-2.10721,-10 1/1:29.3928:16:0:0:16:575:-10,-4.81648,0 0/0:17.2472:4:4:150:0:0:0,-1.20412,-10 0/0:68.4223:21:21:793:0:0:0,-6.32163,-10 0/0:23.2678:6:6:228:0:0:0,-1.80618,-10 0/0:32.2987:9:9:296:0:0:0,-2.70927,-10 0/0:50.3605:15:15:556:0:0:0,-4.51545,-10 0/0:53.3708:16:16:599:0:0:0,-4.81648,-10 0/1:99:12:3:114:9:338:-10,0,-9.37006 0/0:68.4223:21:21:792:0:0:0,-6.32163,-10 0/0:59.3914:18:18:682:0:0:0,-5.41854,-10 0/0:59.3914:18:18:674:0:0:0,-5.41854,-10 0/1:99:33:18:684:15:512:-10,0,-10 0/0:65.412:20:20:748:0:0:0,-6.0206,-10 0/0:50.3605:15:15:555:0:0:0,-4.51545,-10 0/0:99:34:34:1239:0:0:0,-10,-10 0/0:62.4017:19:19:720:0:0:0,-5.71957,-10 0/0:41.3296:12:12:453:0:0:0,-3.61236,-10 0/0:62.4017:19:19:692:0:0:0,-5.71957,-10 0/0:26.2781:7:7:262:0:0:0,-2.10721,-10 0/0:71.4326:22:22:800:0:0:0,-6.62266,-10 0/0:68.4223:21:21:786:0:0:0,-6.32163,-10 0/0:26.2781:7:7:266:0:0:0,-2.10721,-10 0/0:89.4936:28:28:1052:0:0:0,-8.42884,-10 0/0:38.3193:11:11:404:0:0:0,-3.31133,-10 0/0:80.4635:25:25:913:0:0:0,-7.52575,-10 0/0:11.2266:2:2:76:0:0:0,-0.60206,-7.22 0/0:50.3605:15:15:541:0:0:0,-4.51545,-10 1/1:14.3413:11:0:0:11:415:-10,-3.31133,0 0/0:80.4635:25:25:936:0:0:0,-7.52575,-10 0/0:50.3605:15:15:567:0:0:0,-4.51545,-10 0/1:99:46:24:886:22:779:-10,0,-10 0/0:41.3296:12:12:455:0:0:0,-3.61236,-10 0/0:41.3296:12:12:455:0:0:0,-3.61236,-10 0/0:68.4223:21:21:735:0:0:0,-6.32163,-10 0/1:10.6768:16:15:525:1:38:-0.18764,0,-10 0/0:44.3399:13:13:483:0:0:0,-3.91339,-10 0/0:77.4531:24:24:856:0:0:0,-7.22472,-10 0/0:32.2987:9:9:320:0:0:0,-2.70927,-10 0/0:50.3605:15:15:556:0:0:0,-4.51545,-10 0/0:77.4531:24:24:903:0:0:0,-7.22472,-10 0/0:68.4223:21:21:780:0:0:0,-6.32163,-10 0/0:50.3605:15:15:558:0:0:0,-4.51545,-10 0/0:68.4223:21:21:785:0:0:0,-6.32163,-10 0/0:20.2575:5:5:187:0:0:0,-1.50515,-10 1/1:38.4237:19:0:0:19:714:-10,-5.71957,0 0/0:32.2987:9:9:337:0:0:0,-2.70927,-10 0/0:11.2266:2:2:76:0:0:0,-0.60206,-7.22 0/0:44.3399:13:13:483:0:0:0,-3.91339,-10 0/0:95.5121:30:30:1120:0:0:0,-9.0309,-10 0/0:68.4223:21:21:775:0:0:0,-6.32163,-10 0/0:71.4326:22:22:797:0:0:0,-6.62266,-10 0/1:99:25:8:299:17:630:-10,0,-10 0/0:59.3914:18:18:670:0:0:0,-5.41854,-10 0/0:23.2678:6:6:224:0:0:0,-1.80618,-10 0/0:68.4223:21:21:795:0:0:0,-6.32163,-10 0/0:44.3399:13:13:484:0:0:0,-3.91339,-10 0/0:11.2266:2:2:76:0:0:0,-0.60206,-7.22 0/0:53.3708:16:16:597:0:0:0,-4.81648,-10 0/0:35.309:10:10:364:0:0:0,-3.0103,-10 0/0:50.3605:15:15:509:0:0:0,-4.51545,-10 scaffold_297 705985 . G A 386.925 . AB=0.377778;ABP=8.84915;AC=2;AF=0.0108696;AN=184;AO=17;CIGAR=1X;DP=1506;DPB=1506;DPRA=1.38604;EPP=6.20364;EPPR=3.03365;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9321;NS=92;NUMALT=1;ODDS=7.91235;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=620;QR=53930;RO=1488;RPP=39.9253;RPPR=3234.16;RUN=1;SAF=6;SAP=6.20364;SAR=11;SRF=742;SRP=3.03365;SRR=746;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.4521:10:10:322:0:0:0,-3.0103,-10 0/0:67.483:13:13:481:0:0:0,-3.91339,-10 0/0:76.5139:16:16:571:0:0:0,-4.81648,-10 0/0:58.4521:10:10:376:0:0:0,-3.0103,-10 0/0:76.5139:16:16:578:0:0:0,-4.81648,-10 0/0:49.4212:7:7:244:0:0:0,-2.10721,-10 0/0:99:29:29:1055:0:0:0,-8.72987,-10 0/0:73.5036:15:15:521:0:0:0,-4.51545,-10 0/0:64.4727:12:12:454:0:0:0,-3.61236,-10 0/0:40.3903:4:4:148:0:0:0,-1.20412,-10 0/0:49.4212:7:7:216:0:0:0,-2.10721,-10 0/0:55.4418:9:9:328:0:0:0,-2.70927,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:82.5344:18:18:668:0:0:0,-5.41854,-10 0/0:82.5344:18:18:641:0:0:0,-5.41854,-10 0/0:99:27:27:953:0:0:0,-8.12781,-10 0/0:99:28:28:1059:0:0:0,-8.42884,-10 0/0:58.4521:10:10:380:0:0:0,-3.0103,-10 0/0:82.5344:18:18:674:0:0:0,-5.41854,-10 0/0:99:31:31:1095:0:0:0,-9.33193,-10 0/0:73.5036:15:15:562:0:0:0,-4.51545,-10 0/0:99:28:28:1021:0:0:0,-8.42884,-10 0/0:52.4315:8:8:281:0:0:0,-2.40824,-10 0/0:91.5636:21:21:765:0:0:0,-6.32163,-10 0/0:49.4212:7:7:266:0:0:0,-2.10721,-10 0/0:85.5443:19:19:692:0:0:0,-5.71957,-10 0/0:55.4418:9:9:342:0:0:0,-2.70927,-10 0/0:70.4933:14:14:527:0:0:0,-4.21442,-10 0/0:70.4933:14:14:501:0:0:0,-4.21442,-10 0/0:99:40:40:1474:0:0:0,-10,-10 0/0:40.3903:4:4:147:0:0:0,-1.20412,-10 0/0:49.4212:7:7:259:0:0:0,-2.10721,-10 0/0:76.5139:16:16:548:0:0:0,-4.81648,-10 0/0:40.3903:4:4:145:0:0:0,-1.20412,-10 0/0:91.5636:21:21:794:0:0:0,-6.32163,-10 0/0:46.4109:6:6:217:0:0:0,-1.80618,-10 0/0:55.4418:9:9:319:0:0:0,-2.70927,-10 0/0:73.5036:15:15:554:0:0:0,-4.51545,-10 0/0:76.5139:16:16:603:0:0:0,-4.81648,-10 0/0:64.4727:12:12:446:0:0:0,-3.61236,-10 0/0:91.5636:21:21:745:0:0:0,-6.32163,-10 0/0:82.5344:18:18:682:0:0:0,-5.41854,-10 0/0:82.5344:18:18:662:0:0:0,-5.41854,-10 0/0:99:33:33:1234:0:0:0,-9.93399,-10 0/0:88.5542:20:20:704:0:0:0,-6.0206,-10 0/0:73.5036:15:15:566:0:0:0,-4.51545,-10 0/0:99:34:34:1239:0:0:0,-10,-10 0/0:85.5443:19:19:698:0:0:0,-5.71957,-10 0/0:64.4727:12:12:432:0:0:0,-3.61236,-10 0/0:85.5443:19:19:671:0:0:0,-5.71957,-10 0/0:49.4212:7:7:264:0:0:0,-2.10721,-10 0/0:91.5636:22:21:739:0:0:0,-6.32163,-10 0/0:91.5636:21:21:755:0:0:0,-6.32163,-10 0/0:49.4212:7:7:265:0:0:0,-2.10721,-10 0/0:99:28:28:1042:0:0:0,-8.42884,-10 0/0:61.4624:11:11:410:0:0:0,-3.31133,-10 0/0:99:25:25:884:0:0:0,-7.52575,-10 0/0:34.3697:2:2:53:0:0:0,-0.60206,-5.035 0/0:73.5036:15:15:507:0:0:0,-4.51545,-10 0/0:61.4624:11:11:385:0:0:0,-3.31133,-10 0/0:99:25:25:910:0:0:0,-7.52575,-10 0/0:73.5036:15:15:544:0:0:0,-4.51545,-10 0/0:99:46:46:1606:0:0:0,-10,-10 0/0:64.4727:12:12:434:0:0:0,-3.61236,-10 0/0:64.4727:12:12:451:0:0:0,-3.61236,-10 0/0:91.5636:21:21:763:0:0:0,-6.32163,-10 0/0:76.5139:16:16:570:0:0:0,-4.81648,-10 0/0:67.483:13:13:481:0:0:0,-3.91339,-10 0/0:97.5843:23:23:841:0:0:0,-6.92369,-10 0/0:55.4418:9:9:304:0:0:0,-2.70927,-10 0/0:73.5036:15:15:483:0:0:0,-4.51545,-10 0/1:99:24:12:430:12:452:-10,0,-10 0/0:91.5636:21:21:738:0:0:0,-6.32163,-10 0/0:73.5036:15:15:537:0:0:0,-4.51545,-10 0/1:88.8256:21:16:601:5:168:-10,0,-10 0/0:43.4006:5:5:190:0:0:0,-1.50515,-10 0/0:85.5443:19:19:683:0:0:0,-5.71957,-10 0/0:55.4418:9:9:342:0:0:0,-2.70927,-10 0/0:34.3697:2:2:76:0:0:0,-0.60206,-7.22 0/0:67.483:13:13:478:0:0:0,-3.91339,-10 0/0:99:30:30:1042:0:0:0,-9.0309,-10 0/0:91.5636:21:21:779:0:0:0,-6.32163,-10 0/0:94.5749:22:22:797:0:0:0,-6.62266,-10 0/0:99:25:25:941:0:0:0,-7.52575,-10 0/0:82.5344:18:18:680:0:0:0,-5.41854,-10 0/0:46.4109:6:6:228:0:0:0,-1.80618,-10 0/0:91.5636:21:21:779:0:0:0,-6.32163,-10 0/0:67.483:13:13:469:0:0:0,-3.91339,-10 0/0:34.3697:2:2:76:0:0:0,-0.60206,-7.22 0/0:76.5139:16:16:577:0:0:0,-4.81648,-10 0/0:58.4521:10:10:343:0:0:0,-3.0103,-10 0/0:73.5036:15:15:505:0:0:0,-4.51545,-10 scaffold_297 710432 . G A 671.637 . AB=0.5625;ABP=4.6389;AC=2;AF=0.0108696;AN=184;AO=27;CIGAR=1X;DP=1862;DPB=1862;DPRA=2.38411;EPP=3.09072;EPPR=4.54478;GTI=1;LEN=1;MEANALT=1;MQM=59.5185;MQMR=59.934;NS=92;NUMALT=1;ODDS=1.37123;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=962;QR=66830;RO=1834;RPP=61.6401;RPPR=3959.48;RUN=1;SAF=14;SAP=3.09072;SAR=13;SRF=902;SRP=4.07591;SRR=932;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.1547:13:13:479:0:0:0,-3.91339,-10 0/0:32.062:4:4:152:0:0:0,-1.20412,-10 0/0:80.2268:20:20:751:0:0:0,-6.0206,-10 0/0:50.1238:10:10:372:0:0:0,-3.0103,-10 0/0:53.1341:11:11:413:0:0:0,-3.31133,-10 0/1:0.975641:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:45:45:1662:0:0:0,-10,-10 0/0:68.1856:16:16:552:0:0:0,-4.81648,-10 0/0:71.1959:17:17:640:0:0:0,-5.11751,-10 0/0:35.0723:5:5:190:0:0:0,-1.50515,-10 0/0:32.062:4:4:145:0:0:0,-1.20412,-10 0/0:38.0826:6:6:221:0:0:0,-1.80618,-10 0/0:89.2574:23:23:808:0:0:0,-6.92369,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:95.2771:25:25:899:0:0:0,-7.52575,-10 0/0:59.1547:13:13:424:0:0:0,-3.91339,-10 0/0:77.2165:19:19:715:0:0:0,-5.71957,-10 0/0:44.1032:8:8:302:0:0:0,-2.40824,-10 0/0:92.2674:24:24:898:0:0:0,-7.22472,-10 0/0:99:40:40:1464:0:0:0,-10,-10 0/0:77.2165:19:19:692:0:0:0,-5.71957,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:44.1032:8:8:285:0:0:0,-2.40824,-10 0/0:89.2574:23:23:858:0:0:0,-6.92369,-10 0/0:71.1959:17:17:642:0:0:0,-5.11751,-10 0/0:99:34:34:1231:0:0:0,-10,-10 0/0:95.2771:25:25:917:0:0:0,-7.52575,-10 0/0:71.1959:17:17:630:0:0:0,-5.11751,-10 0/0:92.2674:24:24:874:0:0:0,-7.22472,-10 0/0:99:33:33:1223:0:0:0,-9.93399,-10 0/0:32.062:4:4:150:0:0:0,-1.20412,-10 0/0:47.1135:9:9:331:0:0:0,-2.70927,-10 0/0:83.237:21:21:766:0:0:0,-6.32163,-10 0/0:53.1341:11:11:404:0:0:0,-3.31133,-10 0/0:89.2574:23:23:833:0:0:0,-6.92369,-10 0/0:47.1135:9:9:315:0:0:0,-2.70927,-10 0/0:65.1753:15:15:540:0:0:0,-4.51545,-10 0/0:99:27:27:973:0:0:0,-8.12781,-10 0/0:77.2165:19:19:707:0:0:0,-5.71957,-10 0/0:71.1959:17:17:642:0:0:0,-5.11751,-10 0/0:99:38:38:1383:0:0:0,-10,-10 0/0:77.2165:19:19:681:0:0:0,-5.71957,-10 0/0:65.1753:15:15:531:0:0:0,-4.51545,-10 0/0:99:42:42:1538:0:0:0,-10,-10 0/0:89.2574:23:23:808:0:0:0,-6.92369,-10 0/0:59.1547:13:13:485:0:0:0,-3.91339,-10 0/0:99:42:41:1467:0:0:0,-10,-10 0/0:99:40:40:1497:0:0:0,-10,-10 0/0:56.1444:12:12:429:0:0:0,-3.61236,-10 0/0:99:47:47:1715:0:0:0,-10,-10 0/0:59.1547:13:13:490:0:0:0,-3.91339,-10 0/0:99:43:43:1590:0:0:0,-10,-10 0/0:68.1856:16:16:606:0:0:0,-4.81648,-10 0/0:44.1032:8:8:284:0:0:0,-2.40824,-10 0/0:99:44:44:1608:0:0:0,-10,-10 0/0:71.1959:17:17:643:0:0:0,-5.11751,-10 0/0:99:29:29:1001:0:0:0,-8.72987,-10 0/0:35.0723:5:5:185:0:0:0,-1.50515,-10 0/0:74.2062:18:18:659:0:0:0,-5.41854,-10 0/0:92.2674:24:24:902:0:0:0,-7.22472,-10 0/0:80.2268:20:20:727:0:0:0,-6.0206,-10 0/0:74.2062:18:18:650:0:0:0,-5.41854,-10 0/1:99:48:21:731:27:962:-10,0,-10 0/0:65.1753:15:15:527:0:0:0,-4.51545,-10 0/0:65.1753:15:15:554:0:0:0,-4.51545,-10 0/0:77.2165:19:19:675:0:0:0,-5.71957,-10 0/0:56.1444:12:12:406:0:0:0,-3.61236,-10 0/0:59.1547:13:13:468:0:0:0,-3.91339,-10 0/0:99:36:36:1312:0:0:0,-10,-10 0/0:68.1856:16:16:578:0:0:0,-4.81648,-10 0/0:92.2674:24:24:833:0:0:0,-7.22472,-10 0/0:99:36:36:1338:0:0:0,-10,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:71.1959:17:17:630:0:0:0,-5.11751,-10 0/0:99:39:39:1356:0:0:0,-10,-10 0/0:71.1959:17:17:592:0:0:0,-5.11751,-10 0/0:50.1238:10:10:375:0:0:0,-3.0103,-10 0/0:62.165:14:14:499:0:0:0,-4.21442,-10 0/0:44.1032:8:8:295:0:0:0,-2.40824,-10 0/0:59.1547:13:13:469:0:0:0,-3.91339,-10 0/0:99:42:42:1531:0:0:0,-10,-10 0/0:99:44:44:1582:0:0:0,-10,-10 0/0:74.2062:18:18:642:0:0:0,-5.41854,-10 0/0:74.2062:18:18:657:0:0:0,-5.41854,-10 0/0:86.2472:22:22:814:0:0:0,-6.62266,-10 0/0:26.0414:2:2:76:0:0:0,-0.60206,-7.22 0/0:62.165:14:14:528:0:0:0,-4.21442,-10 0/0:62.165:14:14:525:0:0:0,-4.21442,-10 0/0:32.062:4:4:145:0:0:0,-1.20412,-10 0/0:47.1135:9:9:331:0:0:0,-2.70927,-10 0/0:65.1753:15:15:563:0:0:0,-4.51545,-10 0/0:56.1444:12:12:429:0:0:0,-3.61236,-10 scaffold_297 711096 . T C 29606.7 . AB=0.506309;ABP=3.2295;AC=97;AF=0.527174;AN=184;AO=1049;CIGAR=1X;DP=2105;DPB=2105;DPRA=0.967053;EPP=7.58302;EPPR=3.60514;GTI=1;LEN=1;MEANALT=1;MQM=59.6616;MQMR=59.8199;NS=92;NUMALT=1;ODDS=0.407404;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=37589;QR=38421;RO=1055;RPP=2280.88;RPPR=2293.91;RUN=1;SAF=548;SAP=7.58302;SAR=501;SRF=519;SRP=3.60514;SRR=536;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.8979:19:19:718:0:0:0,-5.71957,-10 0/0:22.7743:7:7:253:0:0:0,-2.10721,-10 0/0:85.9902:28:28:1003:0:0:0,-8.42884,-10 1/1:40.1692:16:0:0:16:571:-10,-4.81648,0 0/1:99:13:6:227:7:254:-10,0,-10 1/1:16.0868:8:0:0:8:304:-10,-2.40824,0 0/1:99:42:16:592:26:903:-10,0,-10 0/1:99:26:15:524:11:361:-10,0,-10 1/1:22.1074:10:0:0:10:356:-10,-3.0103,0 0/0:16.7537:5:5:182:0:0:0,-1.50515,-10 0/0:37.8258:12:12:434:0:0:0,-3.61236,-10 0/1:1.26591:4:0:0:4:133:-10,-1.20412,0 1/1:94.3548:34:0:0:34:1243:-10,-10,0 0/0:99:48:48:1733:0:0:0,-10,-10 0/0:99:35:35:1277:0:0:0,-10,-10 0/1:99:17:6:212:11:414:-10,0,-10 0/1:99:34:18:660:16:549:-10,0,-10 1/1:10.0662:6:0:0:6:223:-10,-1.80618,0 0/1:99:24:16:586:8:296:-10,0,-10 1/1:99:45:0:0:45:1560:-10,-10,0 0/0:19.5991:22:21:744:1:38:0,-1.48024,-10 0/0:99:45:45:1667:0:0:0,-10,-10 1/1:28.128:12:0:0:12:433:-10,-3.61236,0 0/1:99:26:13:455:13:475:-10,0,-10 1/1:52.2104:20:0:0:20:725:-10,-6.0206,0 0/1:99:26:13:455:13:489:-10,0,-10 0/0:19.7908:21:20:671:1:35:0,-1.49941,-10 1/1:25.1177:11:0:0:11:417:-10,-3.31133,0 1/1:49.2001:19:0:0:19:657:-10,-5.71957,0 0/1:99:47:27:911:20:639:-10,0,-10 1/1:34.1486:14:0:0:14:502:-10,-4.21442,0 0/1:17.8621:12:11:386:1:38:-1.26682,0,-10 0/0:70.9391:23:23:867:0:0:0,-6.92369,-10 1/1:31.1383:13:0:0:13:489:-10,-3.91339,0 1/1:64.2516:24:0:0:24:866:-10,-7.22472,0 0/0:49.867:16:16:584:0:0:0,-4.81648,-10 1/1:37.1589:15:0:0:15:541:-10,-4.51545,0 0/1:99:29:11:368:18:579:-10,0,-10 0/0:49.867:16:16:570:0:0:0,-4.81648,-10 1/1:55.2207:21:0:0:21:773:-10,-6.32163,0 0/0:99:38:38:1425:0:0:0,-10,-10 1/1:61.2413:23:0:0:23:823:-10,-6.92369,0 1/1:37.1589:15:0:0:15:531:-10,-4.51545,0 1/1:99:36:0:0:36:1270:-10,-10,0 0/1:99:22:15:562:7:241:-10,0,-10 0/0:85.9902:28:28:1040:0:0:0,-8.42884,-10 0/0:99:53:53:1863:0:0:0,-10,-10 0/1:99:34:12:452:22:826:-10,0,-10 0/0:55.8876:18:18:680:0:0:0,-5.41854,-10 1/1:70.2722:26:0:0:26:933:-10,-7.82678,0 0/0:52.8773:17:17:644:0:0:0,-5.11751,-10 1/1:99:44:0:0:44:1633:-10,-10,0 0/0:73.9494:24:24:857:0:0:0,-7.22472,-10 0/0:46.8567:15:15:560:0:0:0,-4.51545,-10 0/1:99:45:23:859:22:803:-10,0,-10 1/1:25.1177:11:0:0:11:397:-10,-3.31133,0 0/1:99:22:10:372:12:447:-10,0,-10 0/0:34.8155:11:11:414:0:0:0,-3.31133,-10 1/1:43.1795:17:0:0:17:601:-10,-5.11751,0 1/1:19.0971:9:0:0:9:309:-10,-2.70927,0 0/0:99:35:34:1267:0:0:0,-10,-10 0/0:70.9391:23:23:857:0:0:0,-6.92369,-10 1/1:99:38:0:0:38:1372:-10,-10,0 0/0:49.867:16:16:581:0:0:0,-4.81648,-10 1/1:19.0971:9:0:0:9:314:-10,-2.70927,0 0/1:99:49:20:717:29:1066:-10,0,-10 0/1:99:23:13:489:10:355:-10,0,-10 1/1:34.1486:14:0:0:14:500:-10,-4.21442,0 0/0:99:34:34:1240:0:0:0,-10,-10 1/1:19.0971:9:0:0:9:330:-10,-2.70927,0 1/1:64.2516:24:0:0:24:839:-10,-7.22472,0 1/1:99:39:0:0:39:1423:-10,-10,0 1/1:64.2516:24:0:0:24:882:-10,-7.22472,0 1/1:37.1589:15:0:0:15:502:-10,-4.51545,0 1/1:99:38:0:0:38:1319:-10,-10,0 0/0:49.867:16:16:606:0:0:0,-4.81648,-10 0/0:16.7537:5:5:165:0:0:0,-1.50515,-10 1/1:34.1486:14:0:0:14:509:-10,-4.21442,0 1/1:22.1074:10:0:0:10:372:-10,-3.0103,0 1/1:49.2001:19:0:0:19:685:-10,-5.71957,0 0/1:99:39:15:543:24:902:-10,0,-10 0/1:99:32:13:490:19:701:-10,0,-10 0/1:99:24:15:566:9:338:-10,0,-10 0/1:99:38:21:762:17:597:-10,0,-10 0/0:99:38:38:1402:0:0:0,-10,-10 1/1:10.0662:6:0:0:6:215:-10,-1.80618,0 0/0:67.9288:22:22:773:0:0:0,-6.62266,-10 0/0:58.8979:19:19:654:0:0:0,-5.71957,-10 0/1:67.9283:6:4:149:2:76:-6.58991,0,-10 0/0:58.8979:19:19:718:0:0:0,-5.71957,-10 1/1:46.1898:18:0:0:18:615:-10,-5.41854,0 0/0:52.8773:17:17:635:0:0:0,-5.11751,-10 scaffold_297 711110 . C T 15871.8 . AB=0.484094;ABP=4.59911;AC=46;AF=0.25;AN=184;AO=563;CIGAR=1X;DP=2108;DPB=2108;DPRA=1.35184;EPP=3.04501;EPPR=3.69099;GTI=0;LEN=1;MEANALT=1.02703;MQM=59.6448;MQMR=59.7636;NS=92;NUMALT=1;ODDS=3.09373;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=20506;QR=56113;RO=1544;RPP=1216.88;RPPR=3338.41;RUN=1;SAF=281;SAP=3.01416;SAR=282;SRF=785;SRP=3.96102;SRR=759;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:51.4298:19:0:0:19:687:-10,-5.71957,0 1/1:15.3062:7:0:0:7:266:-10,-2.10721,0 1/1:78.5225:28:0:0:28:1057:-10,-8.42884,0 0/0:50.2481:16:16:595:0:0:0,-4.81648,-10 0/1:99:13:7:263:6:215:-10,0,-10 0/0:26.1657:8:8:294:0:0:0,-2.40824,-10 0/1:99:42:26:882:16:579:-10,0,-10 0/1:99:26:11:403:15:553:-10,0,-10 0/0:32.1863:10:10:377:0:0:0,-3.0103,-10 0/0:17.1348:5:5:163:0:0:0,-1.50515,-10 0/0:38.2069:12:12:420:0:0:0,-3.61236,-10 0/0:14.1245:4:4:119:0:0:0,-1.20412,-10 0/0:99:34:34:1260:0:0:0,-10,-10 0/0:99:48:47:1722:1:16:0,-10,-10 0/1:99:35:15:557:20:732:-10,0,-10 0/1:99:17:11:416:6:228:-10,0,-10 0/0:99:34:34:1239:0:0:0,-10,-10 0/0:20.1451:6:6:216:0:0:0,-1.80618,-10 0/1:99:24:9:317:15:568:-10,0,-10 0/0:99:45:45:1578:0:0:0,-10,-10 0/0:68.3099:22:22:825:0:0:0,-6.62266,-10 0/1:99:46:20:757:26:955:-10,0,-10 0/0:38.2069:12:12:408:0:0:0,-3.61236,-10 0/1:99:26:13:467:13:484:-10,0,-10 0/0:62.2893:20:20:727:0:0:0,-6.0206,-10 0/0:83.3613:27:27:961:0:0:0,-8.12781,-10 1/1:57.4504:21:0:0:21:749:-10,-6.32163,0 0/0:35.1966:11:11:413:0:0:0,-3.31133,-10 0/0:59.279:19:19:681:0:0:0,-5.71957,-10 0/1:99:47:20:695:27:955:-10,0,-10 0/0:44.2275:14:14:521:0:0:0,-4.21442,-10 0/1:19.4057:12:1:38:11:394:-10,0,-1.26682 0/0:71.3202:23:23:859:0:0:0,-6.92369,-10 0/0:41.2172:13:13:481:0:0:0,-3.91339,-10 0/0:74.3304:24:24:892:0:0:0,-7.22472,-10 0/0:50.2481:16:16:604:0:0:0,-4.81648,-10 0/0:47.2378:15:15:549:0:0:0,-4.51545,-10 0/1:99:29:18:639:11:383:-10,0,-10 1/1:42.3989:16:0:0:16:577:-10,-4.81648,0 0/0:65.2996:21:21:786:0:0:0,-6.32163,-10 0/1:99:38:24:897:14:523:-10,0,-10 0/0:71.3202:23:23:806:0:0:0,-6.92369,-10 0/0:47.2378:15:15:503:0:0:0,-4.51545,-10 0/0:99:36:36:1306:0:0:0,-10,-10 0/0:42.0317:22:21:771:1:16:0,-3.68024,-10 0/1:99:28:17:611:11:397:-10,0,-10 0/1:99:53:26:951:27:1005:-10,0,-10 0/1:99:34:22:823:12:456:-10,0,-10 1/1:48.4195:18:0:0:18:683:-10,-5.41854,0 0/0:80.3509:26:26:951:0:0:0,-7.82678,-10 0/0:53.2584:17:17:597:0:0:0,-5.11751,-10 0/0:99:44:44:1646:0:0:0,-10,-10 1/1:66.4813:24:0:0:24:867:-10,-7.22472,0 0/0:47.2378:15:15:563:0:0:0,-4.51545,-10 0/0:99:45:45:1638:0:0:0,-10,-10 0/0:35.1966:11:11:413:0:0:0,-3.31133,-10 0/1:99:22:12:428:10:357:-10,0,-10 0/0:35.1966:11:11:414:0:0:0,-3.31133,-10 0/0:53.2584:17:17:598:0:0:0,-5.11751,-10 0/0:29.176:9:9:335:0:0:0,-2.70927,-10 0/1:99:35:21:750:14:527:-10,0,-10 1/1:63.471:23:0:0:23:826:-10,-6.92369,0 0/0:99:38:38:1401:0:0:0,-10,-10 0/0:50.2481:16:16:584:0:0:0,-4.81648,-10 0/0:29.176:9:9:323:0:0:0,-2.70927,-10 0/0:99:49:49:1802:0:0:0,-10,-10 0/1:99:23:10:327:12:443:-10,0,-10 0/0:44.2275:14:14:521:0:0:0,-4.21442,-10 0/1:99:34:12:443:22:791:-10,0,-10 0/0:29.176:9:9:339:0:0:0,-2.70927,-10 0/0:74.3304:24:24:862:0:0:0,-7.22472,-10 0/0:99:39:39:1388:0:0:0,-10,-10 0/0:74.3304:24:24:887:0:0:0,-7.22472,-10 0/0:47.2378:15:15:530:0:0:0,-4.51545,-10 0/0:99:39:39:1410:0:0:0,-10,-10 0/0:50.2481:16:16:579:0:0:0,-4.81648,-10 0/0:17.1348:5:5:166:0:0:0,-1.50515,-10 0/0:44.2275:14:14:518:0:0:0,-4.21442,-10 0/0:32.1863:10:10:373:0:0:0,-3.0103,-10 0/0:59.279:19:19:657:0:0:0,-5.71957,-10 0/1:99:39:24:883:15:535:-10,0,-10 0/1:99:32:19:665:13:467:-10,0,-10 0/1:99:24:9:317:15:514:-10,0,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/1:99:38:23:858:15:548:-10,0,-10 0/0:20.1451:6:6:228:0:0:0,-1.80618,-10 0/0:68.3099:22:22:798:0:0:0,-6.62266,-10 1/1:51.4298:19:0:0:19:655:-10,-5.71957,0 0/1:69.5692:6:2:76:4:150:-10,0,-6.58991 1/1:51.4298:19:0:0:19:712:-10,-5.71957,0 0/0:56.2687:18:18:655:0:0:0,-5.41854,-10 1/1:45.4092:17:0:0:17:636:-10,-5.11751,0 scaffold_297 711122 . G A 359.449 . AB=0.636364;ABP=6.56362;AC=1;AF=0.00543478;AN=184;AO=17;CIGAR=1X;DP=2107;DPB=2107;DPRA=1.2584;EPP=4.1599;EPPR=3.02692;GTI=0;LEN=1;MEANALT=1;MQM=54.2941;MQMR=59.7766;NS=92;NUMALT=1;ODDS=10.4287;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=577;QR=75730;RO=2090;RPP=39.9253;RPPR=4437.76;RUN=1;SAF=7;SAP=4.1599;SAR=10;SRF=1059;SRP=3.82486;SRR=1031;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:90.4457:19:19:675:0:0:0,-5.71957,-10 0/0:54.3227:7:7:265:0:0:0,-2.10721,-10 0/0:99:28:28:1015:0:0:0,-8.42884,-10 0/0:81.4153:16:16:585:0:0:0,-4.81648,-10 0/0:72.3845:13:13:466:0:0:0,-3.91339,-10 0/0:57.333:8:8:301:0:0:0,-2.40824,-10 0/0:99:41:41:1411:0:0:0,-10,-10 0/0:99:26:26:934:0:0:0,-7.82678,-10 0/0:63.3536:10:10:374:0:0:0,-3.0103,-10 0/0:48.3021:5:5:181:0:0:0,-1.50515,-10 0/0:69.3742:12:12:407:0:0:0,-3.61236,-10 0/0:45.2918:4:4:150:0:0:0,-1.20412,-10 0/0:99:34:34:1258:0:0:0,-10,-10 0/0:99:48:48:1705:0:0:0,-10,-10 0/0:99:35:35:1249:0:0:0,-10,-10 0/0:84.4255:17:17:622:0:0:0,-5.11751,-10 0/0:99:34:34:1252:0:0:0,-10,-10 0/0:51.3124:6:6:212:0:0:0,-1.80618,-10 0/0:99:24:24:899:0:0:0,-7.22472,-10 0/0:99:45:45:1605:0:0:0,-10,-10 0/1:99:22:8:295:14:529:-10,0,-10 0/0:99:46:46:1714:0:0:0,-10,-10 0/0:69.3742:12:12:445:0:0:0,-3.61236,-10 0/0:83.1057:26:25:914:1:16:0,-4.81181,-10 0/0:93.4555:20:20:737:0:0:0,-6.0206,-10 0/0:99:27:27:960:0:0:0,-8.12781,-10 0/0:96.4647:21:21:737:0:0:0,-6.32163,-10 0/0:66.3639:11:11:409:0:0:0,-3.31133,-10 0/0:63.3959:19:18:668:1:16:0,-2.84082,-10 0/0:99:47:46:1649:1:16:0,-10,-10 0/0:75.3948:14:14:524:0:0:0,-4.21442,-10 0/0:69.3742:12:12:450:0:0:0,-3.61236,-10 0/0:99:23:23:852:0:0:0,-6.92369,-10 0/0:72.3845:13:13:494:0:0:0,-3.91339,-10 0/0:99:24:24:874:0:0:0,-7.22472,-10 0/0:81.4153:16:16:594:0:0:0,-4.81648,-10 0/0:78.405:15:15:525:0:0:0,-4.51545,-10 0/0:99:29:29:1043:0:0:0,-8.72987,-10 0/0:81.4153:16:16:555:0:0:0,-4.81648,-10 0/0:96.4647:21:21:765:0:0:0,-6.32163,-10 0/0:99:38:38:1381:0:0:0,-10,-10 0/0:99:23:23:819:0:0:0,-6.92369,-10 0/0:78.405:15:15:563:0:0:0,-4.51545,-10 0/0:99:36:36:1277:0:0:0,-10,-10 0/0:99:22:22:786:0:0:0,-6.62266,-10 0/0:99:28:28:1032:0:0:0,-8.42884,-10 0/0:99:53:53:1904:0:0:0,-10,-10 0/0:99:34:34:1282:0:0:0,-10,-10 0/0:87.4357:18:18:662:0:0:0,-5.41854,-10 0/0:99:26:26:928:0:0:0,-7.82678,-10 0/0:84.4255:17:17:640:0:0:0,-5.11751,-10 0/0:99:44:44:1610:0:0:0,-10,-10 0/0:99:24:24:853:0:0:0,-7.22472,-10 0/0:78.405:15:15:544:0:0:0,-4.51545,-10 0/0:99:45:45:1641:0:0:0,-10,-10 0/0:66.3639:11:11:392:0:0:0,-3.31133,-10 0/0:99:22:22:795:0:0:0,-6.62266,-10 0/0:66.3639:11:11:415:0:0:0,-3.31133,-10 0/0:84.4255:17:17:579:0:0:0,-5.11751,-10 0/0:60.3433:9:9:325:0:0:0,-2.70927,-10 0/0:99:35:35:1275:0:0:0,-10,-10 0/0:99:23:23:849:0:0:0,-6.92369,-10 0/0:99:38:38:1365:0:0:0,-10,-10 0/0:81.4153:16:16:576:0:0:0,-4.81648,-10 0/0:60.3433:9:9:339:0:0:0,-2.70927,-10 0/0:99:49:49:1725:0:0:0,-10,-10 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:75.3948:14:14:515:0:0:0,-4.21442,-10 0/0:99:34:34:1214:0:0:0,-10,-10 0/0:60.3433:9:9:337:0:0:0,-2.70927,-10 0/0:99:24:24:865:0:0:0,-7.22472,-10 0/0:99:39:39:1387:0:0:0,-10,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:78.405:15:15:528:0:0:0,-4.51545,-10 0/0:99:39:39:1422:0:0:0,-10,-10 0/0:81.4153:16:16:562:0:0:0,-4.81648,-10 0/0:48.3021:5:5:175:0:0:0,-1.50515,-10 0/0:75.3948:14:14:508:0:0:0,-4.21442,-10 0/0:63.3536:10:10:368:0:0:0,-3.0103,-10 0/0:90.4457:19:19:660:0:0:0,-5.71957,-10 0/0:99:39:39:1421:0:0:0,-10,-10 0/0:99:32:32:1135:0:0:0,-9.63296,-10 0/0:99:24:24:901:0:0:0,-7.22472,-10 0/0:99:38:38:1399:0:0:0,-10,-10 0/0:99:38:38:1337:0:0:0,-10,-10 0/0:51.3124:6:6:223:0:0:0,-1.80618,-10 0/0:99:22:22:805:0:0:0,-6.62266,-10 0/0:90.4457:19:19:675:0:0:0,-5.71957,-10 0/0:51.3124:6:6:225:0:0:0,-1.80618,-10 0/0:90.4457:19:19:692:0:0:0,-5.71957,-10 0/0:87.4357:18:18:666:0:0:0,-5.41854,-10 0/0:84.4255:17:17:646:0:0:0,-5.11751,-10 scaffold_297 755056 . G A 47581.7 . AB=0.470588;ABP=3.13803;AC=183;AF=0.994565;AN=184;AO=1570;CIGAR=1X;DP=1582;DPB=1582;DPRA=0;EPP=15.2314;EPPR=4.78696;GTI=0;LEN=1;MEANALT=1.01087;MQM=58.2108;MQMR=60;NS=92;NUMALT=1;ODDS=8.81506;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=57951;QR=384;RO=11;RPP=3412.22;RPPR=26.8965;RUN=1;SAF=832;SAP=15.2314;SAR=738;SRF=4;SRP=4.78696;SRR=7;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:69.0416:11:0:0:11:406:-10,-3.31133,0 1/1:53.9901:6:0:0:6:222:-10,-1.80618,0 1/1:99:23:0:0:23:844:-10,-6.92369,0 1/1:72.0518:12:0:0:12:440:-10,-3.61236,0 1/1:87.1032:17:0:0:17:641:-10,-5.11751,0 1/1:60.0107:8:0:0:8:302:-10,-2.40824,0 1/1:99:26:0:0:26:950:-10,-7.82678,0 1/1:87.1032:17:0:0:17:600:-10,-5.11751,0 1/1:72.0518:12:0:0:12:451:-10,-3.61236,0 1/1:44.9592:3:0:0:3:114:-10,-0.90309,0 1/1:57.0004:7:0:0:7:266:-10,-2.10721,0 1/1:63.021:9:0:0:9:331:-10,-2.70927,0 1/1:99:22:0:0:22:790:-10,-6.62266,0 1/1:99:28:0:0:28:995:-10,-8.42884,0 1/1:99:22:0:0:22:812:-10,-6.62266,0 1/1:96.1286:20:0:0:20:759:-10,-6.0206,0 0/1:99:17:9:308:8:304:-10,0,-10 1/1:69.0416:11:0:0:11:404:-10,-3.31133,0 1/1:72.0518:12:0:0:12:448:-10,-3.61236,0 1/1:99:29:0:0:29:1044:-10,-8.72987,0 1/1:75.0621:13:0:0:13:470:-10,-3.91339,0 1/1:99:37:0:0:37:1356:-10,-10,0 1/1:63.021:9:0:0:9:335:-10,-2.70927,0 1/1:81.0827:15:0:0:15:563:-10,-4.51545,0 1/1:87.1032:17:0:0:17:595:-10,-5.11751,0 1/1:99:33:0:0:33:1201:-10,-9.93399,0 1/1:84.093:16:0:0:16:601:-10,-4.81648,0 1/1:84.093:16:0:0:16:582:-10,-4.81648,0 1/1:90.1133:18:0:0:18:677:-10,-5.41854,0 1/1:99:36:0:0:36:1311:-10,-10,0 1/1:53.9901:6:0:0:6:217:-10,-1.80618,0 1/1:60.0107:8:0:0:8:304:-10,-2.40824,0 1/1:90.1133:18:0:0:18:675:-10,-5.41854,0 1/1:72.0518:12:0:0:12:431:-10,-3.61236,0 1/1:99:22:0:0:22:772:-10,-6.62266,0 1/1:63.021:9:0:0:9:316:-10,-2.70927,0 1/1:57.0004:7:0:0:7:263:-10,-2.10721,0 1/1:99:24:0:0:24:894:-10,-7.22472,0 1/1:81.0827:15:0:0:15:558:-10,-4.51545,0 1/1:72.0518:12:0:0:12:449:-10,-3.61236,0 1/1:99:28:0:0:28:1042:-10,-8.42884,0 1/1:99:26:0:0:26:957:-10,-7.82678,0 1/1:38.2843:18:1:38:17:583:-10,-0.363267,0 1/1:99:26:0:0:26:971:-10,-7.82678,0 1/1:84.093:16:0:0:16:589:-10,-4.81648,0 1/1:72.0518:12:0:0:12:455:-10,-3.61236,0 1/1:99:23:0:0:23:871:-10,-6.92369,0 1/1:99:24:0:0:24:898:-10,-7.22472,0 1/1:69.0416:11:0:0:11:410:-10,-3.31133,0 1/1:99:41:0:0:41:1526:-10,-10,0 1/1:57.0004:7:0:0:7:265:-10,-2.10721,0 1/1:99:33:0:0:33:1225:-10,-9.93399,0 1/1:63.021:9:0:0:9:304:-10,-2.70927,0 1/1:50.9798:5:0:0:5:190:-10,-1.50515,0 1/1:99:36:0:0:36:1296:-10,-10,0 1/1:69.0416:11:0:0:11:418:-10,-3.31133,0 1/1:96.1286:20:0:0:20:758:-10,-6.0206,0 1/1:60.0107:8:0:0:8:304:-10,-2.40824,0 1/1:84.093:16:0:0:16:590:-10,-4.81648,0 1/1:57.0004:7:0:0:7:266:-10,-2.10721,0 1/1:99:24:0:0:24:902:-10,-7.22472,0 1/1:66.0313:10:0:0:10:378:-10,-3.0103,0 1/1:99:34:0:0:34:1234:-10,-10,0 1/1:72.0518:12:0:0:12:439:-10,-3.61236,0 1/1:60.0107:8:0:0:8:304:-10,-2.40824,0 1/1:99:28:0:0:27:996:-10,-8.12781,0 1/1:99:22:0:0:22:824:-10,-6.62266,0 1/1:69.0416:11:0:0:11:406:-10,-3.31133,0 1/1:99:29:0:0:29:1091:-10,-8.72987,0 1/1:63.021:9:0:0:9:327:-10,-2.70927,0 1/1:60.0107:8:0:0:8:300:-10,-2.40824,0 1/1:99:23:0:0:23:850:-10,-6.92369,0 1/1:99:28:0:0:28:1010:-10,-8.42884,0 1/1:96.1286:20:0:0:20:733:-10,-6.0206,0 1/1:99:23:0:0:23:861:-10,-6.92369,0 1/1:60.0107:8:0:0:8:297:-10,-2.40824,0 1/1:93.1232:19:0:0:19:709:-10,-5.71957,0 1/1:63.021:9:0:0:9:337:-10,-2.70927,0 1/1:47.9695:4:0:0:4:150:-10,-1.20412,0 1/1:72.0518:12:0:0:12:444:-10,-3.61236,0 1/1:97.2095:37:1:38:36:1364:-10,-5.76991,0 1/1:90.1133:18:0:0:18:664:-10,-5.41854,0 1/1:99:24:0:0:24:908:-10,-7.22472,0 1/1:99:22:0:0:22:811:-10,-6.62266,0 1/1:96.1286:20:0:0:20:738:-10,-6.0206,0 1/1:57.0004:7:0:0:7:264:-10,-2.10721,0 1/1:78.0724:14:0:0:14:523:-10,-4.21442,0 1/1:75.0621:13:0:0:13:458:-10,-3.91339,0 1/1:53.9901:6:0:0:6:225:-10,-1.80618,0 1/1:87.1032:17:0:0:17:632:-10,-5.11751,0 1/1:99:21:0:0:21:781:-10,-6.32163,0 1/1:66.0313:10:0:0:10:380:-10,-3.0103,0 scaffold_334 86241 . C T 4364.43 . AB=0.492228;ABP=3.11156;AC=17;AF=0.0923913;AN=184;AO=168;CIGAR=1X;DP=1949;DPB=1949;DPRA=0.908253;EPP=3.47562;EPPR=7.6997;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9955;NS=92;NUMALT=1;ODDS=0.140634;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6080;QR=64243;RO=1780;RPP=367.818;RPPR=3868.23;RUN=1;SAF=87;SAP=3.47562;SAR=81;SRF=921;SRP=7.6997;SRR=859;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:63.0275:14:14:503:0:0:0,-4.21442,-10 0/0:63.0275:14:14:532:0:0:0,-4.21442,-10 0/0:81.0893:20:20:720:0:0:0,-6.0206,-10 0/0:66.0378:15:15:570:0:0:0,-4.51545,-10 0/0:66.0378:15:15:533:0:0:0,-4.51545,-10 0/0:69.0481:16:16:574:0:0:0,-4.81648,-10 1/1:81.8357:33:0:0:33:1171:-10,-9.93399,0 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:57.0069:12:12:424:0:0:0,-3.61236,-10 0/0:29.9142:3:3:107:0:0:0,-0.90309,-9.98667 0/0:44.9657:8:8:304:0:0:0,-2.40824,-10 0/0:44.9657:8:8:281:0:0:0,-2.40824,-10 0/0:99:34:34:1223:0:0:0,-10,-10 0/0:99:33:33:1107:0:0:0,-9.93399,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:54.8472:28:27:938:1:38:0,-3.18168,-10 0/1:98.2686:22:18:659:4:152:-10,0,-10 0/0:44.9657:8:8:304:0:0:0,-2.40824,-10 0/0:87.1097:22:22:815:0:0:0,-6.62266,-10 0/0:99:47:47:1709:0:0:0,-10,-10 0/1:99:22:14:521:8:278:-10,0,-10 0/0:99:38:37:1379:0:0:0,-10,-10 0/0:53.9966:11:11:411:0:0:0,-3.31133,-10 0/0:99:27:27:1005:0:0:0,-8.12781,-10 0/0:87.1097:22:22:814:0:0:0,-6.62266,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:72.0584:17:17:591:0:0:0,-5.11751,-10 0/0:53.9966:11:11:404:0:0:0,-3.31133,-10 0/0:78.079:19:19:626:0:0:0,-5.71957,-10 0/0:99:34:34:1258:0:0:0,-10,-10 0/0:44.9657:8:8:268:0:0:0,-2.40824,-10 0/0:81.0893:20:20:735:0:0:0,-6.0206,-10 0/1:1.65179:11:0:0:11:345:-10,-3.31133,0 0/1:0.747836:10:0:0:10:380:-10,-3.0103,0 0/0:84.0995:21:21:784:0:0:0,-6.32163,-10 0/0:38.9451:6:6:226:0:0:0,-1.80618,-10 0/0:57.0069:12:12:444:0:0:0,-3.61236,-10 0/0:99:39:39:1442:0:0:0,-10,-10 0/0:78.079:19:19:695:0:0:0,-5.71957,-10 0/0:72.0584:17:17:597:0:0:0,-5.11751,-10 0/0:99:31:31:1145:0:0:0,-9.33193,-10 0/0:66.0378:15:15:530:0:0:0,-4.51545,-10 0/0:93.1295:24:24:830:0:0:0,-7.22472,-10 0/1:99:28:8:304:20:749:-10,0,-10 0/0:90.1197:23:23:845:0:0:0,-6.92369,-10 0/0:50.9863:10:10:379:0:0:0,-3.0103,-10 0/0:99:50:50:1750:0:0:0,-10,-10 0/0:99:43:43:1561:0:0:0,-10,-10 0/0:57.0069:12:12:381:0:0:0,-3.61236,-10 0/0:99:39:39:1378:0:0:0,-10,-10 0/0:47.976:9:9:335:0:0:0,-2.70927,-10 0/0:99:33:33:1152:0:0:0,-9.93399,-10 0/0:75.0687:18:18:673:0:0:0,-5.41854,-10 0/0:29.9142:3:3:109:0:0:0,-0.90309,-10 0/0:99:47:47:1722:0:0:0,-10,-10 0/0:87.1097:22:22:802:0:0:0,-6.62266,-10 0/0:75.0687:18:18:636:0:0:0,-5.41854,-10 0/0:53.9966:11:11:387:0:0:0,-3.31133,-10 0/0:90.1197:23:23:845:0:0:0,-6.92369,-10 0/0:35.9348:5:5:173:0:0:0,-1.50515,-10 0/1:99:30:17:626:13:477:-10,0,-10 0/0:99:32:32:1148:0:0:0,-9.63296,-10 0/0:99:43:43:1439:0:0:0,-10,-10 0/1:99:16:10:378:6:226:-10,0,-10 0/0:63.0275:14:14:496:0:0:0,-4.21442,-10 0/0:99:28:28:987:0:0:0,-8.42884,-10 0/0:99:27:27:918:0:0:0,-8.12781,-10 0/0:38.9451:6:6:196:0:0:0,-1.80618,-10 0/0:99:37:37:1365:0:0:0,-10,-10 0/0:47.976:9:9:328:0:0:0,-2.70927,-10 0/0:63.0275:14:14:529:0:0:0,-4.21442,-10 0/0:99:36:36:1355:0:0:0,-10,-10 0/0:99:35:35:1182:0:0:0,-10,-10 0/0:60.0172:13:13:484:0:0:0,-3.91339,-10 0/0:99:37:37:1361:0:0:0,-10,-10 0/0:63.0275:14:14:522:0:0:0,-4.21442,-10 0/0:60.0172:13:13:485:0:0:0,-3.91339,-10 1/1:39.6915:19:0:0:19:721:-10,-5.71957,0 0/0:47.976:9:9:334:0:0:0,-2.70927,-10 0/0:57.0069:12:12:430:0:0:0,-3.61236,-10 0/0:99:44:44:1546:0:0:0,-10,-10 0/0:99:40:40:1444:0:0:0,-10,-10 1/1:42.7018:20:0:0:20:699:-10,-6.0206,0 0/0:93.1295:24:24:899:0:0:0,-7.22472,-10 0/0:87.1097:22:22:802:0:0:0,-6.62266,-10 0/0:41.9554:7:7:266:0:0:0,-2.10721,-10 0/0:87.1097:22:22:801:0:0:0,-6.62266,-10 0/0:38.9451:6:6:226:0:0:0,-1.80618,-10 0/1:99:9:5:189:4:152:-10,0,-10 0/1:80.6638:12:9:302:3:114:-9.37006,0,-10 0/1:99:23:17:621:6:227:-10,0,-10 0/1:0.747836:10:0:0:10:351:-10,-3.0103,0 scaffold_334 249247 . C T 6306.7 . AB=0.537954;ABP=6.80142;AC=19;AF=0.103261;AN=184;AO=219;CIGAR=1X;DP=2028;DPB=2028;DPRA=1.16902;EPP=4.686;EPPR=4.31895;GTI=1;LEN=1;MEANALT=1.05556;MQM=59.9543;MQMR=59.9546;NS=92;NUMALT=1;ODDS=0.189705;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8047;QR=64669;RO=1807;RPP=279.541;RPPR=3044.85;RUN=1;SAF=116;SAP=4.686;SAR=103;SRF=895;SRP=3.35759;SRR=912;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:58.212:15:15:526:0:0:0,-4.51545,-10 0/0:61.2223:16:16:597:0:0:0,-4.81648,-10 0/0:99:32:32:1138:0:0:0,-9.63296,-10 0/0:55.2017:14:14:465:0:0:0,-4.21442,-10 0/0:64.2326:17:17:622:0:0:0,-5.11751,-10 1/1:4.6669:8:0:0:8:304:-10,-2.40824,0 0/0:99:45:45:1667:0:0:0,-10,-10 0/0:99:36:36:1346:0:0:0,-10,-10 0/0:40.1502:9:9:335:0:0:0,-2.70927,-10 0/0:16.0678:1:1:37:0:0:0,-0.30103,-3.7 0/0:43.1605:10:10:376:0:0:0,-3.0103,-10 0/0:37.1399:8:8:276:0:0:0,-2.40824,-10 0/0:99:39:39:1323:0:0:0,-10,-10 0/0:99:44:44:1511:0:0:0,-10,-10 0/1:99:39:17:631:22:829:-10,0,-10 0/0:85.3045:24:24:868:0:0:0,-7.22472,-10 0/0:99:31:31:1126:0:0:0,-9.33193,-10 0/0:64.2326:17:17:601:0:0:0,-5.11751,-10 0/0:76.2738:21:21:781:0:0:0,-6.32163,-10 0/1:99:45:21:753:22:774:-10,0,-10 0/0:82.2943:23:23:834:0:0:0,-6.92369,-10 0/1:99:30:14:507:16:592:-10,0,-10 0/0:25.0987:4:4:151:0:0:0,-1.20412,-10 0/0:73.2635:20:20:740:0:0:0,-6.0206,-10 0/0:70.2532:19:19:628:0:0:0,-5.71957,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:22.2916:19:18:643:1:38:0,-0.640816,-10 0/0:52.1914:13:13:492:0:0:0,-3.91339,-10 0/0:64.2326:17:17:626:0:0:0,-5.11751,-10 0/0:99:37:37:1271:0:0:0,-10,-10 0/0:40.1502:9:9:342:0:0:0,-2.70927,-10 0/0:52.1914:13:13:465:0:0:0,-3.91339,-10 0/0:79.284:22:22:822:0:0:0,-6.62266,-10 0/0:52.1914:13:13:432:0:0:0,-3.91339,-10 0/0:79.284:22:22:804:0:0:0,-6.62266,-10 0/0:43.1605:10:10:372:0:0:0,-3.0103,-10 0/0:76.2738:21:21:772:0:0:0,-6.32163,-10 0/1:99:33:11:416:22:795:-10,0,-10 0/0:61.2223:16:16:579:0:0:0,-4.81648,-10 0/0:61.2223:16:16:567:0:0:0,-4.81648,-10 0/0:99:32:32:1119:0:0:0,-9.63296,-10 0/0:67.2429:18:18:639:0:0:0,-5.41854,-10 0/0:79.284:22:22:804:0:0:0,-6.62266,-10 0/0:99:39:39:1435:0:0:0,-10,-10 0/0:52.1914:13:13:479:0:0:0,-3.91339,-10 0/0:67.2429:18:18:645:0:0:0,-5.41854,-10 0/0:99:53:53:1920:0:0:0,-10,-10 0/0:99:33:33:1212:0:0:0,-9.93399,-10 0/0:49.1811:12:12:454:0:0:0,-3.61236,-10 0/0:99:47:47:1693:0:0:0,-10,-10 0/0:70.2532:19:19:673:0:0:0,-5.71957,-10 0/0:99:30:30:1038:0:0:0,-9.0309,-10 0/0:40.1502:9:9:335:0:0:0,-2.70927,-10 0/0:40.1502:9:9:325:0:0:0,-2.70927,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:55.2017:14:14:510:0:0:0,-4.21442,-10 0/0:56.2891:31:30:980:1:38:0,-4.04057,-10 1/1:34.7699:18:0:0:18:674:-10,-5.41854,0 0/0:76.2738:21:21:727:0:0:0,-6.32163,-10 0/0:58.212:15:15:523:0:0:0,-4.51545,-10 0/0:99:35:35:1210:0:0:0,-10,-10 0/0:76.2738:21:21:786:0:0:0,-6.32163,-10 0/0:99:34:34:1161:0:0:0,-10,-10 0/0:58.212:15:15:513:0:0:0,-4.51545,-10 0/0:28.109:5:5:190:0:0:0,-1.50515,-10 0/0:99:42:42:1464:0:0:0,-10,-10 0/0:85.3045:24:24:815:0:0:0,-7.22472,-10 0/0:43.1605:10:10:332:0:0:0,-3.0103,-10 0/1:99:26:15:493:11:415:-10,0,-10 1/1:7.6772:9:0:0:9:318:-10,-2.70927,0 0/0:85.3045:24:24:891:0:0:0,-7.22472,-10 0/0:91.3246:26:26:946:0:0:0,-7.82678,-10 0/0:99:33:33:1193:0:0:0,-9.93399,-10 0/0:76.2738:21:21:785:0:0:0,-6.32163,-10 0/0:73.2635:20:20:732:0:0:0,-6.0206,-10 1/1:34.7699:18:0:0:18:657:-10,-5.41854,0 0/0:55.2017:14:14:511:0:0:0,-4.21442,-10 0/0:97.3431:28:28:1034:0:0:0,-8.42884,-10 0/0:22.0884:3:3:108:0:0:0,-0.90309,-10 0/0:55.2017:14:14:505:0:0:0,-4.21442,-10 0/0:90.991:43:42:1469:1:38:0,-7.51082,-10 0/1:99:32:17:603:15:560:-10,0,-10 0/0:91.3246:26:26:862:0:0:0,-7.82678,-10 0/0:99:29:29:1026:0:0:0,-8.72987,-10 0/1:99:28:11:394:17:591:-10,0,-10 0/0:40.1502:9:9:341:0:0:0,-2.70927,-10 0/0:61.2223:16:16:588:0:0:0,-4.81648,-10 0/0:37.1399:8:8:301:0:0:0,-2.40824,-10 0/1:99:9:5:189:4:148:-10,0,-10 0/1:99:25:14:490:11:414:-10,0,-10 0/1:99:30:13:464:17:644:-10,0,-10 0/1:0.140772:6:0:0:6:218:-10,-1.80618,0 scaffold_334 319477 . T C 40489.9 . AB=0.413793;ABP=4.88226;AC=178;AF=0.967391;AN=184;AO=1377;CIGAR=1X;DP=1437;DPB=1437;DPRA=0;EPP=8.13384;EPPR=3.16541;GTI=4;LEN=1;MEANALT=1.04545;MQM=59.9601;MQMR=60;NS=92;NUMALT=1;ODDS=3.61452;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=49667;QR=2013;RO=56;RPP=2993.13;RPPR=124.613;RUN=1;SAF=717;SAP=8.13384;SAR=660;SRF=27;SRP=3.16541;SRR=29;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:51.3345:12:0:0:12:443:-10,-3.61236,0 1/1:33.2727:6:0:0:6:198:-10,-1.80618,0 1/1:57.3551:14:0:0:14:526:-10,-4.21442,0 1/1:42.3036:9:0:0:9:308:-10,-2.70927,0 1/1:42.3036:9:0:0:9:328:-10,-2.70927,0 0/1:0.0544919:11:11:382:0:0:0,-3.31133,-10 1/1:99:43:0:0:42:1534:-10,-10,0 1/1:78.4272:21:0:0:21:778:-10,-6.32163,0 1/1:75.4169:20:0:0:20:757:-10,-6.0206,0 1/1:24.2418:3:0:0:3:113:-10,-0.90309,0 1/1:54.3448:13:0:0:13:484:-10,-3.91339,0 1/1:24.2418:3:0:0:3:113:-10,-0.90309,0 1/1:96.4831:27:0:0:27:986:-10,-8.12781,0 1/1:96.4831:27:0:0:27:993:-10,-8.12781,0 1/1:96.4831:27:0:0:27:996:-10,-8.12781,0 1/1:35.6416:23:1:38:22:821:-10,-1.76196,0 1/1:81.4375:22:0:0:22:815:-10,-6.62266,0 1/1:51.3345:12:0:0:12:440:-10,-3.61236,0 1/1:51.3345:12:0:0:12:436:-10,-3.61236,0 1/1:90.468:25:0:0:25:900:-10,-7.52575,0 1/1:66.386:17:0:0:17:585:-10,-5.11751,0 1/1:84.4477:23:0:0:23:856:-10,-6.92369,0 1/1:30.2624:5:0:0:5:190:-10,-1.50515,0 1/1:60.3654:15:0:0:15:550:-10,-4.51545,0 1/1:96.4831:27:0:0:27:981:-10,-8.12781,0 1/1:87.4579:24:0:0:24:872:-10,-7.22472,0 1/1:54.3448:13:0:0:13:469:-10,-3.91339,0 1/1:33.2727:6:0:0:6:223:-10,-1.80618,0 1/1:54.3448:14:0:0:13:465:-10,-3.91339,0 1/1:81.4375:22:0:0:22:776:-10,-6.62266,0 1/1:36.283:7:0:0:7:248:-10,-2.10721,0 1/1:33.2727:6:0:0:6:228:-10,-1.80618,0 1/1:39.2933:8:0:0:8:269:-10,-2.40824,0 1/1:33.2727:6:0:0:6:193:-10,-1.80618,0 1/1:54.3448:13:0:0:13:447:-10,-3.91339,0 1/1:24.2418:3:0:0:3:114:-10,-0.90309,0 1/1:48.3242:11:0:0:11:412:-10,-3.31133,0 1/1:75.4169:20:0:0:20:718:-10,-6.0206,0 1/1:57.3551:14:0:0:14:496:-10,-4.21442,0 1/1:57.3551:14:0:0:14:502:-10,-4.21442,0 1/1:99:28:0:0:28:1003:-10,-8.42884,0 1/1:54.3448:13:0:0:13:480:-10,-3.91339,0 1/1:72.4066:19:0:0:19:646:-10,-5.71957,0 1/1:69.3963:18:0:0:18:651:-10,-5.41854,0 1/1:54.3448:13:0:0:13:488:-10,-3.91339,0 1/1:60.3654:15:0:0:15:547:-10,-4.51545,0 1/1:99:30:0:0:30:1103:-10,-9.0309,0 1/1:72.4066:19:0:0:19:672:-10,-5.71957,0 1/1:69.3963:18:0:0:18:657:-10,-5.41854,0 1/1:87.4579:25:0:0:24:813:-10,-7.22472,0 1/1:51.3345:12:0:0:12:390:-10,-3.61236,0 1/1:57.3551:14:0:0:14:489:-10,-4.21442,0 1/1:36.283:7:0:0:7:218:-10,-2.10721,0 1/1:36.283:7:0:0:7:258:-10,-2.10721,0 1/1:99:43:0:0:43:1548:-10,-10,0 0/1:0.109676:12:12:419:0:0:0,-3.61236,-10 1/1:66.386:17:0:0:17:614:-10,-5.11751,0 1/1:39.2933:8:0:0:8:293:-10,-2.40824,0 1/1:57.3551:14:0:0:14:522:-10,-4.21442,0 1/1:42.3036:9:0:0:9:308:-10,-2.70927,0 1/1:87.4579:24:0:0:24:879:-10,-7.22472,0 1/1:66.386:17:0:0:17:617:-10,-5.11751,0 1/1:93.4779:26:0:0:26:905:-10,-7.82678,0 1/1:57.3551:14:0:0:14:502:-10,-4.21442,0 1/1:57.3551:14:0:0:14:525:-10,-4.21442,0 1/1:99:34:0:0:34:1194:-10,-10,0 1/1:66.386:17:0:0:17:611:-10,-5.11751,0 1/1:45.3139:10:0:0:10:379:-10,-3.0103,0 1/1:99:31:0:0:31:1130:-10,-9.33193,0 1/1:48.3242:11:0:0:11:412:-10,-3.31133,0 1/1:48.3242:12:0:0:11:391:-10,-3.31133,0 1/1:81.4375:22:0:0:22:810:-10,-6.62266,0 1/1:75.4169:20:0:0:20:734:-10,-6.0206,0 1/1:51.3345:12:0:0:12:410:-10,-3.61236,0 1/1:99:29:0:0:29:1029:-10,-8.72987,0 1/1:39.2933:8:0:0:8:271:-10,-2.40824,0 1/1:45.3139:10:0:0:10:349:-10,-3.0103,0 1/1:39.2933:8:0:0:8:289:-10,-2.40824,0 1/1:21.2315:2:0:0:2:53:-5.035,-0.60206,0 1/1:57.3551:14:0:0:14:493:-10,-4.21442,0 1/1:87.4579:24:0:0:24:876:-10,-7.22472,0 1/1:72.4066:19:0:0:19:672:-10,-5.71957,0 1/1:45.3139:10:0:0:10:354:-10,-3.0103,0 1/1:51.3345:12:0:0:12:448:-10,-3.61236,0 1/1:66.386:17:0:0:17:616:-10,-5.11751,0 1/1:33.2727:6:0:0:6:193:-10,-1.80618,0 1/1:45.3139:10:0:0:10:379:-10,-3.0103,0 1/1:51.3345:12:0:0:12:448:-10,-3.61236,0 0/1:0.000423079:4:4:151:0:0:0,-1.20412,-10 0/1:99:16:9:334:7:252:-10,0,-10 0/1:99:13:8:290:5:183:-10,0,-10 0/1:0.0544919:11:11:399:0:0:0,-3.31133,-10 scaffold_346 500241 . C T 2359.25 . AB=0.733945;ABP=54.8268;AC=6;AF=0.0326087;AN=184;AO=95;CIGAR=1X;DP=2029;DPB=2029;DPRA=1.08197;EPP=3.21602;EPPR=16.1065;GTI=2;LEN=1;MEANALT=1;MQM=59.9263;MQMR=59.9033;NS=92;NUMALT=1;ODDS=0.640887;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3336;QR=69758;RO=1934;RPP=209.3;RPPR=4202.64;RUN=1;SAF=49;SAP=3.21602;SAR=46;SRF=1021;SRP=16.1065;SRR=913;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:37.7092:11:11:375:0:0:0,-3.31133,-10 0/0:22.6577:6:6:228:0:0:0,-1.80618,-10 0/0:67.8122:21:21:727:0:0:0,-6.32163,-10 0/0:40.7195:12:12:455:0:0:0,-3.61236,-10 0/0:46.7401:14:14:514:0:0:0,-4.21442,-10 0/0:34.6989:10:10:366:0:0:0,-3.0103,-10 0/0:99:39:39:1423:0:0:0,-10,-10 0/0:99:35:35:1270:0:0:0,-10,-10 0/0:43.7298:13:13:439:0:0:0,-3.91339,-10 0/0:31.6886:9:9:337:0:0:0,-2.70927,-10 0/0:52.7607:16:16:565:0:0:0,-4.81648,-10 0/0:19.6474:5:5:168:0:0:0,-1.50515,-10 0/0:99:48:48:1691:0:0:0,-10,-10 0/0:99:44:44:1550:0:0:0,-10,-10 0/0:99:37:37:1350:0:0:0,-10,-10 0/0:73.8328:23:23:778:0:0:0,-6.92369,-10 0/0:64.8019:20:20:712:0:0:0,-6.0206,-10 0/0:49.7504:15:15:552:0:0:0,-4.51545,-10 0/0:49.7504:15:15:542:0:0:0,-4.51545,-10 0/0:99:42:42:1457:0:0:0,-10,-10 0/0:40.7195:12:12:453:0:0:0,-3.61236,-10 0/0:79.8533:25:25:940:0:0:0,-7.52575,-10 0/0:46.7401:14:14:501:0:0:0,-4.21442,-10 0/0:94.905:30:30:1120:0:0:0,-9.0309,-10 0/0:55.771:17:17:629:0:0:0,-5.11751,-10 0/0:70.8225:22:22:756:0:0:0,-6.62266,-10 0/0:64.8019:20:20:677:0:0:0,-6.0206,-10 0/0:19.6474:5:5:167:0:0:0,-1.50515,-10 0/0:85.874:27:27:951:0:0:0,-8.12781,-10 0/0:88.8836:28:28:980:0:0:0,-8.42884,-10 0/0:28.6783:8:8:240:0:0:0,-2.40824,-10 0/0:64.8019:20:20:714:0:0:0,-6.0206,-10 0/0:17.9787:12:11:359:1:16:0,-0.933179,-10 0/0:49.7504:15:15:556:0:0:0,-4.51545,-10 0/0:73.925:32:31:1146:1:16:0,-6.52781,-10 0/0:28.6783:8:8:304:0:0:0,-2.40824,-10 0/0:43.7298:13:13:487:0:0:0,-3.91339,-10 0/0:79.8533:25:25:923:0:0:0,-7.52575,-10 0/0:82.8635:26:26:914:0:0:0,-7.82678,-10 0/0:49.7504:15:15:526:0:0:0,-4.51545,-10 0/0:99:37:37:1331:0:0:0,-10,-10 0/0:61.7916:19:19:640:0:0:0,-5.71957,-10 0/0:70.8225:22:22:782:0:0:0,-6.62266,-10 0/0:99:37:37:1335:0:0:0,-10,-10 0/0:73.8328:23:23:846:0:0:0,-6.92369,-10 0/0:49.7504:15:15:545:0:0:0,-4.51545,-10 0/0:99:60:60:2115:0:0:0,-10,-10 0/0:52.7607:16:16:603:0:0:0,-4.81648,-10 0/0:64.8019:20:20:711:0:0:0,-6.0206,-10 0/0:99:55:55:1912:0:0:0,-10,-10 0/0:61.7916:19:19:689:0:0:0,-5.71957,-10 0/0:99:34:34:1214:0:0:0,-10,-10 0/0:46.7401:14:14:512:0:0:0,-4.21442,-10 0/0:10.6165:2:2:71:0:0:0,-0.60206,-6.745 0/0:99:47:47:1711:0:0:0,-10,-10 0/0:49.7504:15:15:556:0:0:0,-4.51545,-10 0/0:85.874:27:27:951:0:0:0,-8.12781,-10 0/0:58.7813:18:18:643:0:0:0,-5.41854,-10 0/0:67.8122:21:21:789:0:0:0,-6.32163,-10 0/0:28.6783:8:8:277:0:0:0,-2.40824,-10 0/0:94.905:30:30:1118:0:0:0,-9.0309,-10 0/0:64.8019:20:20:718:0:0:0,-6.0206,-10 0/0:85.874:27:27:981:0:0:0,-8.12781,-10 0/0:61.7916:19:19:717:0:0:0,-5.71957,-10 0/0:64.8019:20:20:727:0:0:0,-6.0206,-10 0/0:91.8931:29:29:1085:0:0:0,-8.72987,-10 0/0:67.8122:21:21:759:0:0:0,-6.32163,-10 1/1:11.5329:13:0:0:13:470:-10,-3.91339,0 0/1:99:39:15:565:24:849:-10,0,-10 0/1:1.36587:11:0:0:11:398:-10,-3.31133,0 0/0:73.8328:23:23:833:0:0:0,-6.92369,-10 0/0:94.905:30:30:1043:0:0:0,-9.0309,-10 0/0:99:35:35:1292:0:0:0,-10,-10 0/0:55.771:17:17:634:0:0:0,-5.11751,-10 0/0:91.8931:29:29:1058:0:0:0,-8.72987,-10 0/1:0.00292189:18:1:38:17:609:-10,-0.363267,0 0/0:55.771:17:17:641:0:0:0,-5.11751,-10 0/0:55.771:17:17:634:0:0:0,-5.11751,-10 0/0:31.6886:9:9:339:0:0:0,-2.70927,-10 0/0:58.7813:18:18:652:0:0:0,-5.41854,-10 0/0:99:45:45:1675:0:0:0,-10,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:73.8328:23:23:862:0:0:0,-6.92369,-10 0/0:58.7813:18:18:669:0:0:0,-5.41854,-10 0/1:99:41:13:471:28:978:-10,0,-10 0/0:22.6577:6:6:197:0:0:0,-1.80618,-10 0/0:58.7813:18:18:640:0:0:0,-5.41854,-10 0/0:55.771:17:17:645:0:0:0,-5.11751,-10 0/0:22.6577:6:6:224:0:0:0,-1.80618,-10 0/0:67.8122:21:21:789:0:0:0,-6.32163,-10 0/0:76.8431:24:24:853:0:0:0,-7.22472,-10 0/0:58.7813:18:18:653:0:0:0,-5.41854,-10 scaffold_352 223729 . A G 491.143 . AB=0.689655;ABP=12.0706;AC=1;AF=0.00543478;AN=184;AO=21;CIGAR=1X;DP=1537;DPB=1537;DPRA=1.63857;EPP=3.1137;EPPR=31.0847;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8285;NS=92;NUMALT=1;ODDS=1.73833;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=769;QR=55338;RO=1516;RPP=48.6112;RPPR=3294.96;RUN=1;SAF=10;SAP=3.1137;SAR=11;SRF=828;SRP=31.0847;SRR=688;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:33.2163:10:10:368:0:0:0,-3.0103,-10 0/0:15.1545:4:4:150:0:0:0,-1.20412,-10 0/0:75.3605:24:24:874:0:0:0,-7.22472,-10 0/0:30.206:9:9:329:0:0:0,-2.70927,-10 0/0:45.2575:14:14:491:0:0:0,-4.21442,-10 0/0:9.1339:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:33:33:1205:0:0:0,-9.93399,-10 0/0:45.2575:14:14:532:0:0:0,-4.21442,-10 0/0:36.2266:11:11:412:0:0:0,-3.31133,-10 0/0:12.1442:3:3:114:0:0:0,-0.90309,-10 0/0:21.1751:6:6:225:0:0:0,-1.80618,-10 0/0:30.206:9:9:308:0:0:0,-2.70927,-10 0/0:87.401:28:28:1005:0:0:0,-8.42884,-10 0/0:93.4197:30:30:1128:0:0:0,-9.0309,-10 0/0:57.2987:18:18:667:0:0:0,-5.41854,-10 0/0:69.3399:22:22:800:0:0:0,-6.62266,-10 0/0:60.309:19:19:681:0:0:0,-5.71957,-10 0/0:21.1751:6:6:205:0:0:0,-1.80618,-10 0/0:72.3502:23:23:829:0:0:0,-6.92369,-10 0/0:90.4107:29:29:1084:0:0:0,-8.72987,-10 0/0:51.2781:16:16:602:0:0:0,-4.81648,-10 0/0:99:33:33:1220:0:0:0,-9.93399,-10 0/0:21.1751:6:6:207:0:0:0,-1.80618,-10 0/0:57.2987:18:18:650:0:0:0,-5.41854,-10 0/0:69.3399:22:22:802:0:0:0,-6.62266,-10 0/0:66.3296:21:21:749:0:0:0,-6.32163,-10 0/0:30.206:9:9:338:0:0:0,-2.70927,-10 0/0:33.2163:10:10:373:0:0:0,-3.0103,-10 0/0:66.3296:21:21:767:0:0:0,-6.32163,-10 0/0:99:42:42:1531:0:0:0,-10,-10 0/0:27.1957:8:8:304:0:0:0,-2.40824,-10 0/0:36.2266:11:11:380:0:0:0,-3.31133,-10 0/0:60.309:19:19:708:0:0:0,-5.71957,-10 0/0:27.1957:8:8:262:0:0:0,-2.40824,-10 0/0:57.2987:18:18:658:0:0:0,-5.41854,-10 0/0:24.1854:7:7:264:0:0:0,-2.10721,-10 0/0:30.206:9:9:316:0:0:0,-2.70927,-10 0/0:66.3296:21:21:783:0:0:0,-6.32163,-10 0/0:42.2472:13:13:464:0:0:0,-3.91339,-10 0/0:42.2472:13:13:474:0:0:0,-3.91339,-10 0/0:29.9712:25:24:856:1:38:0,-2.32781,-10 0/0:57.2987:18:18:660:0:0:0,-5.41854,-10 0/0:57.2987:18:18:648:0:0:0,-5.41854,-10 0/0:87.401:28:28:1005:0:0:0,-8.42884,-10 0/0:81.3809:26:26:985:0:0:0,-7.82678,-10 0/0:54.2884:17:17:613:0:0:0,-5.11751,-10 0/0:99:37:37:1295:0:0:0,-10,-10 0/0:45.2575:14:14:532:0:0:0,-4.21442,-10 0/0:30.206:9:9:316:0:0:0,-2.70927,-10 0/0:78.3707:25:25:923:0:0:0,-7.52575,-10 0/0:42.2472:13:13:469:0:0:0,-3.91339,-10 0/0:75.3605:24:24:878:0:0:0,-7.22472,-10 0/0:30.206:9:9:315:0:0:0,-2.70927,-10 0/0:24.1854:7:7:266:0:0:0,-2.10721,-10 0/0:99:35:35:1173:0:0:0,-10,-10 0/0:21.1751:6:6:219:0:0:0,-1.80618,-10 0/0:45.2575:14:14:516:0:0:0,-4.21442,-10 0/0:30.206:9:9:332:0:0:0,-2.70927,-10 0/0:54.2884:17:17:601:0:0:0,-5.11751,-10 0/0:39.2369:12:12:440:0:0:0,-3.61236,-10 0/1:99:29:9:336:20:731:-10,0,-10 0/0:27.1957:8:8:273:0:0:0,-2.40824,-10 0/0:90.4107:29:29:1051:0:0:0,-8.72987,-10 0/0:36.2266:11:11:416:0:0:0,-3.31133,-10 0/0:33.2163:10:10:380:0:0:0,-3.0103,-10 0/0:99:32:32:1162:0:0:0,-9.63296,-10 0/0:27.1957:8:8:300:0:0:0,-2.40824,-10 0/0:27.1957:8:8:304:0:0:0,-2.40824,-10 0/0:87.401:28:28:1032:0:0:0,-8.42884,-10 0/0:51.2781:16:16:588:0:0:0,-4.81648,-10 0/0:81.3809:26:26:968:0:0:0,-7.82678,-10 0/0:99:34:34:1269:0:0:0,-10,-10 0/0:69.3399:22:22:834:0:0:0,-6.62266,-10 0/0:45.2575:14:14:515:0:0:0,-4.21442,-10 0/0:48.2678:15:15:510:0:0:0,-4.51545,-10 0/0:42.2472:13:13:478:0:0:0,-3.91339,-10 0/0:36.2266:11:11:416:0:0:0,-3.31133,-10 0/0:42.2472:13:13:487:0:0:0,-3.91339,-10 0/0:18.1648:5:5:185:0:0:0,-1.50515,-10 0/0:30.206:9:9:333:0:0:0,-2.70927,-10 0/0:87.401:28:28:1037:0:0:0,-8.42884,-10 0/0:93.4197:30:30:1104:0:0:0,-9.0309,-10 0/0:78.3707:25:25:927:0:0:0,-7.52575,-10 0/0:42.2472:13:13:493:0:0:0,-3.91339,-10 0/0:45.2575:14:14:515:0:0:0,-4.21442,-10 0/0:18.1648:5:5:178:0:0:0,-1.50515,-10 0/0:51.2781:16:16:567:0:0:0,-4.81648,-10 0/0:45.2575:14:14:524:0:0:0,-4.21442,-10 0/0:27.1957:8:8:284:0:0:0,-2.40824,-10 0/0:51.2781:16:16:575:0:0:0,-4.81648,-10 0/0:42.2472:13:13:480:0:0:0,-3.91339,-10 0/0:39.2369:12:12:440:0:0:0,-3.61236,-10 scaffold_352 223764 . G A 268.97 . AB=0.478261;ABP=3.10471;AC=1;AF=0.00543478;AN=184;AO=12;CIGAR=1X;DP=1549;DPB=1549;DPRA=1.16225;EPP=3.0103;EPPR=32.7144;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8263;NS=92;NUMALT=1;ODDS=8.09173;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=430;QR=56613;RO=1537;RPP=29.068;RPPR=3254.27;RUN=1;SAF=6;SAP=3.0103;SAR=6;SRF=831;SRP=25.0853;SRR=706;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.2276:10:10:376:0:0:0,-3.0103,-10 0/0:41.1658:4:4:149:0:0:0,-1.20412,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:56.2173:9:9:335:0:0:0,-2.70927,-10 0/0:71.2688:14:14:524:0:0:0,-4.21442,-10 0/0:35.1452:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:32:32:1161:0:0:0,-9.63296,-10 0/0:71.2688:14:14:524:0:0:0,-4.21442,-10 0/0:62.2379:11:11:411:0:0:0,-3.31133,-10 0/0:38.1555:3:3:113:0:0:0,-0.90309,-10 0/0:47.1864:6:6:222:0:0:0,-1.80618,-10 0/0:56.2173:9:9:336:0:0:0,-2.70927,-10 0/0:99:29:29:1049:0:0:0,-8.72987,-10 0/0:99:30:30:1080:0:0:0,-9.0309,-10 0/0:83.3099:18:18:652:0:0:0,-5.41854,-10 0/0:95.3491:22:22:824:0:0:0,-6.62266,-10 0/0:86.3201:19:19:713:0:0:0,-5.71957,-10 0/0:47.1864:6:6:228:0:0:0,-1.80618,-10 0/0:98.3573:23:23:863:0:0:0,-6.92369,-10 0/0:99:29:29:1095:0:0:0,-8.72987,-10 0/0:80.2997:17:17:646:0:0:0,-5.11751,-10 0/0:99:34:34:1252:0:0:0,-10,-10 0/0:47.1864:6:6:216:0:0:0,-1.80618,-10 0/0:83.3099:18:18:658:0:0:0,-5.41854,-10 0/0:95.3491:22:22:796:0:0:0,-6.62266,-10 0/0:92.3399:21:21:766:0:0:0,-6.32163,-10 0/0:56.2173:9:9:342:0:0:0,-2.70927,-10 0/0:59.2276:10:10:378:0:0:0,-3.0103,-10 0/0:92.3399:21:21:768:0:0:0,-6.32163,-10 0/0:99:43:43:1569:0:0:0,-10,-10 0/0:53.207:8:8:304:0:0:0,-2.40824,-10 0/0:62.2379:11:11:391:0:0:0,-3.31133,-10 0/0:86.3201:19:19:692:0:0:0,-5.71957,-10 0/0:53.207:8:8:280:0:0:0,-2.40824,-10 0/0:83.3099:18:18:650:0:0:0,-5.41854,-10 0/0:50.1967:7:7:265:0:0:0,-2.10721,-10 0/0:56.2173:9:9:314:0:0:0,-2.70927,-10 0/0:92.3399:21:21:786:0:0:0,-6.32163,-10 0/0:68.2585:13:13:443:0:0:0,-3.91339,-10 0/0:68.2585:13:13:476:0:0:0,-3.91339,-10 0/0:99:25:25:868:0:0:0,-7.52575,-10 0/0:83.3099:18:18:677:0:0:0,-5.41854,-10 0/0:83.3099:18:18:622:0:0:0,-5.41854,-10 0/0:99:28:28:1017:0:0:0,-8.42884,-10 0/0:99:26:26:980:0:0:0,-7.82678,-10 0/0:80.2997:17:17:618:0:0:0,-5.11751,-10 0/0:99:38:38:1380:0:0:0,-10,-10 0/0:74.2791:15:15:569:0:0:0,-4.51545,-10 0/0:56.2173:9:9:318:0:0:0,-2.70927,-10 0/0:99:25:25:919:0:0:0,-7.52575,-10 0/0:68.2585:13:13:489:0:0:0,-3.91339,-10 0/0:99:24:24:893:0:0:0,-7.22472,-10 0/0:56.2173:9:9:330:0:0:0,-2.70927,-10 0/0:53.207:8:8:301:0:0:0,-2.40824,-10 0/0:99:35:35:1271:0:0:0,-10,-10 0/0:47.1864:6:6:203:0:0:0,-1.80618,-10 0/0:71.2688:14:14:529:0:0:0,-4.21442,-10 0/0:56.2173:9:9:342:0:0:0,-2.70927,-10 0/0:80.2997:17:17:636:0:0:0,-5.11751,-10 0/0:65.2482:12:12:438:0:0:0,-3.61236,-10 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:56.2173:9:9:337:0:0:0,-2.70927,-10 0/0:99:29:29:1047:0:0:0,-8.72987,-10 0/0:62.2379:11:11:418:0:0:0,-3.31133,-10 0/0:59.2276:10:10:369:0:0:0,-3.0103,-10 0/0:99:32:32:1199:0:0:0,-9.63296,-10 0/0:53.207:8:8:300:0:0:0,-2.40824,-10 0/0:53.207:8:8:301:0:0:0,-2.40824,-10 0/0:99:28:28:1056:0:0:0,-8.42884,-10 0/0:77.2894:16:16:597:0:0:0,-4.81648,-10 0/0:99:26:26:954:0:0:0,-7.82678,-10 0/0:99:34:34:1231:0:0:0,-10,-10 0/1:99:23:12:453:11:414:-10,0,-10 0/0:71.2688:14:14:526:0:0:0,-4.21442,-10 0/0:74.2791:15:15:566:0:0:0,-4.51545,-10 0/0:71.2688:14:14:528:0:0:0,-4.21442,-10 0/0:62.2379:11:11:388:0:0:0,-3.31133,-10 0/0:71.2688:14:14:532:0:0:0,-4.21442,-10 0/0:44.1761:5:5:185:0:0:0,-1.50515,-10 0/0:56.2173:9:9:332:0:0:0,-2.70927,-10 0/0:99:28:28:1059:0:0:0,-8.42884,-10 0/0:99:30:30:1100:0:0:0,-9.0309,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 0/0:68.2585:13:13:494:0:0:0,-3.91339,-10 0/0:74.2791:15:15:570:0:0:0,-4.51545,-10 0/0:44.1761:5:5:188:0:0:0,-1.50515,-10 0/0:50.7877:16:15:552:1:16:0,-2.01236,-10 0/0:71.2688:14:14:514:0:0:0,-4.21442,-10 0/0:53.207:8:8:294:0:0:0,-2.40824,-10 0/0:77.2894:16:16:591:0:0:0,-4.81648,-10 0/0:71.2688:14:14:525:0:0:0,-4.21442,-10 0/0:65.2482:12:12:438:0:0:0,-3.61236,-10 scaffold_352 327619 . G C 7418.61 . AB=0.497992;ABP=3.01902;AC=23;AF=0.125;AN=184;AO=270;CIGAR=1X;DP=1852;DPB=1852;DPRA=1.29395;EPP=10.2485;EPPR=4.25035;GTI=0;LEN=1;MEANALT=1.05882;MQM=60;MQMR=59.9518;NS=92;NUMALT=1;ODDS=0.629244;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=9861;QR=57423;RO=1576;RPP=589.308;RPPR=3381.96;RUN=1;SAF=150;SAP=10.2485;SAR=120;SRF=798;SRP=3.56144;SRR=778;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:42.3217:14:14:470:0:0:0,-4.21442,-10 0/0:30.2805:10:10:356:0:0:0,-3.0103,-10 0/0:63.3938:21:21:793:0:0:0,-6.32163,-10 0/0:24.2599:8:8:299:0:0:0,-2.40824,-10 0/1:99:15:6:228:9:336:-10,0,-10 0/0:21.2496:7:7:239:0:0:0,-2.10721,-10 1/1:79.9144:33:0:0:33:1149:-10,-9.93399,0 1/1:52.8217:24:0:0:24:878:-10,-7.22472,0 0/0:39.3114:13:13:446:0:0:0,-3.91339,-10 0/0:24.2599:8:8:304:0:0:0,-2.40824,-10 0/0:27.2702:9:9:312:0:0:0,-2.70927,-10 0/0:15.229:5:5:186:0:0:0,-1.50515,-10 0/0:99:38:37:1366:0:0:0,-10,-10 0/1:99:39:22:808:17:611:-10,0,-10 0/1:99:24:11:380:13:488:-10,0,-10 0/0:69.4144:23:23:872:0:0:0,-6.92369,-10 0/1:99:18:7:241:11:418:-10,0,-10 0/0:30.2805:10:10:376:0:0:0,-3.0103,-10 0/1:99:18:11:414:7:248:-10,0,-10 0/0:99:44:44:1604:0:0:0,-10,-10 0/0:45.332:15:15:546:0:0:0,-4.51545,-10 0/0:87.4762:29:29:1069:0:0:0,-8.72987,-10 0/0:36.3011:12:12:408:0:0:0,-3.61236,-10 0/0:51.3526:17:17:634:0:0:0,-5.11751,-10 0/0:51.3526:17:17:628:0:0:0,-5.11751,-10 0/0:23.1072:24:23:814:1:38:0,-2.04451,-10 0/0:54.3629:18:18:661:0:0:0,-5.41854,-10 0/0:39.3114:13:13:468:0:0:0,-3.91339,-10 0/0:81.4556:27:27:1019:0:0:0,-8.12781,-10 0/0:84.4659:29:28:1048:0:0:0,-8.42884,-10 0/0:6.19811:2:2:72:0:0:0,-0.60206,-6.84 0/0:24.2599:8:8:263:0:0:0,-2.40824,-10 1/1:46.8011:24:0:0:22:798:-10,-6.62266,0 0/0:51.3526:17:17:600:0:0:0,-5.11751,-10 0/0:69.4144:23:23:820:0:0:0,-6.92369,-10 0/0:39.3114:13:13:494:0:0:0,-3.91339,-10 0/0:51.3526:17:17:602:0:0:0,-5.11751,-10 0/0:72.4247:24:24:876:0:0:0,-7.22472,-10 0/0:63.3938:21:21:764:0:0:0,-6.32163,-10 0/0:69.4144:23:23:830:0:0:0,-6.92369,-10 0/0:84.4659:28:28:997:0:0:0,-8.42884,-10 0/0:57.3732:19:19:676:0:0:0,-5.71957,-10 0/0:57.3732:19:19:697:0:0:0,-5.71957,-10 0/0:99:49:49:1762:0:0:0,-10,-10 0/0:81.4556:27:27:1025:0:0:0,-8.12781,-10 0/0:36.3011:12:12:444:0:0:0,-3.61236,-10 0/0:99:43:43:1597:0:0:0,-10,-10 0/0:69.4144:23:23:853:0:0:0,-6.92369,-10 0/0:27.2702:9:9:341:0:0:0,-2.70927,-10 0/0:99:36:35:1278:0:0:0,-10,-10 0/0:33.2908:11:11:409:0:0:0,-3.31133,-10 0/0:93.4969:31:31:1162:0:0:0,-9.33193,-10 0/0:48.3423:16:16:555:0:0:0,-4.81648,-10 0/0:15.229:5:5:163:0:0:0,-1.50515,-10 0/0:99:45:45:1664:0:0:0,-10,-10 0/0:45.332:15:15:546:0:0:0,-4.51545,-10 0/0:93.4969:31:31:1144:0:0:0,-9.33193,-10 0/0:27.2702:9:9:316:0:0:0,-2.70927,-10 1/1:40.7805:20:0:0:20:732:-10,-6.0206,0 0/0:42.3217:14:14:478:0:0:0,-4.21442,-10 0/0:63.3938:21:21:759:0:0:0,-6.32163,-10 1/1:31.7496:17:0:0:17:595:-10,-5.11751,0 0/1:99:44:21:758:23:861:-10,0,-10 0/0:66.4041:22:22:812:0:0:0,-6.62266,-10 0/0:33.2908:11:11:396:0:0:0,-3.31133,-10 0/0:87.4762:29:29:1072:0:0:0,-8.72987,-10 0/1:99:33:17:597:16:571:-10,0,-10 0/0:39.3114:13:13:489:0:0:0,-3.91339,-10 0/1:99:29:16:590:13:491:-10,0,-10 0/0:57.3732:19:19:712:0:0:0,-5.71957,-10 0/0:63.3938:21:21:748:0:0:0,-6.32163,-10 0/0:63.3938:22:21:764:0:0:0,-6.32163,-10 0/0:99:37:37:1354:0:0:0,-10,-10 0/0:57.3732:19:19:696:0:0:0,-5.71957,-10 0/0:93.4969:31:31:1170:0:0:0,-9.33193,-10 0/0:57.3732:19:19:662:0:0:0,-5.71957,-10 1/1:25.729:15:0:0:15:557:-10,-4.51545,0 1/1:22.7187:14:0:0:14:529:-10,-4.21442,0 0/0:18.2393:6:6:227:0:0:0,-1.80618,-10 0/0:27.2702:9:9:294:0:0:0,-2.70927,-10 0/0:99:43:43:1542:0:0:0,-10,-10 0/0:99:38:38:1394:0:0:0,-10,-10 0/1:99:29:14:521:15:561:-10,0,-10 0/0:30.2805:10:10:319:0:0:0,-3.0103,-10 0/0:63.3938:21:21:768:0:0:0,-6.32163,-10 0/0:12.2187:4:4:152:0:0:0,-1.20412,-10 0/0:45.332:15:15:569:0:0:0,-4.51545,-10 0/0:21.2496:7:7:256:0:0:0,-2.10721,-10 0/0:9.20841:3:3:113:0:0:0,-0.90309,-10 0/0:33.2908:11:11:406:0:0:0,-3.31133,-10 0/0:27.2702:9:9:320:0:0:0,-2.70927,-10 0/0:45.332:15:15:546:0:0:0,-4.51545,-10 scaffold_352 442606 . G A 661.984 . AB=0.794118;ABP=28.557;AC=2;AF=0.0108696;AN=184;AO=27;CIGAR=2X;DP=2428;DPB=2428;DPRA=0.639098;EPP=3.09072;EPPR=9.42114;GTI=1;LEN=1;MEANALT=1;MQM=59.8519;MQMR=59.828;NS=92;NUMALT=1;ODDS=7.95718;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=988;QR=87362;RO=2390;RPP=61.6401;RPPR=5158.14;RUN=1;SAF=14;SAP=3.09072;SAR=13;SRF=1157;SRP=8.25818;SRR=1233;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:62.4217:10:10:368:0:0:0,-3.0103,-10 0|0:68.4423:12:12:430:0:0:0,-3.61236,-10 0|0:95.5342:21:21:778:0:0:0,-6.32163,-10 0|0:74.4629:14:14:484:0:0:0,-4.21442,-10 0|0:74.4629:15:14:524:0:0:0,-4.21442,-10 0|0:92.5225:20:20:755:0:0:0,-6.0206,-10 0|0:99:54:54:1969:0:0:0,-10,-10 0|0:99:32:32:1203:0:0:0,-9.63296,-10 0|0:77.4731:15:15:540:0:0:0,-4.51545,-10 0|0:38.3393:2:2:76:0:0:0,-0.60206,-7.22 0|0:83.4937:18:17:616:0:0:0,-5.11751,-10 0|0:71.4526:13:13:473:0:0:0,-3.91339,-10 0|0:99:40:40:1452:0:0:0,-10,-10 0|0:99:36:36:1312:0:0:0,-10,-10 0|0:99:34:34:1237:0:0:0,-10,-10 0|0:99:36:35:1307:0:0:0,-10,-10 0|0:99:38:37:1388:0:0:0,-10,-10 0|0:99:26:26:952:0:0:0,-7.82678,-10 0|0:99:26:26:961:0:0:0,-7.82678,-10 0|0:99:45:45:1634:0:0:0,-10,-10 0|0:99:27:27:927:0:0:0,-8.12781,-10 0|0:99:36:36:1335:0:0:0,-10,-10 0|0:65.432:11:11:404:0:0:0,-3.31133,-10 0|0:95.5342:21:21:773:0:0:0,-6.32163,-10 0|0:99:37:37:1372:0:0:0,-10,-10 0|0:99:40:40:1503:0:0:0,-10,-10 0|0:99:26:26:945:0:0:0,-7.82678,-10 0|0:83.4937:17:17:628:0:0:0,-5.11751,-10 0|0:99:24:24:875:0:0:0,-7.22472,-10 0|0:99:49:49:1757:0:0:0,-10,-10 0|0:59.4114:9:9:340:0:0:0,-2.70927,-10 0|0:86.504:18:18:639:0:0:0,-5.41854,-10 0|0:99:36:35:1292:0:0:0,-10,-10 0|0:86.504:18:18:672:0:0:0,-5.41854,-10 0|0:95.5342:21:21:752:0:0:0,-6.32163,-10 0|0:56.4011:9:8:296:0:0:0,-2.40824,-10 0|0:99:24:24:879:0:0:0,-7.22472,-10 0|0:99:43:43:1561:0:0:0,-10,-10 0|0:99:30:30:1090:0:0:0,-9.0309,-10 0|0:99:29:29:1071:0:0:0,-8.72987,-10 0|0:99:36:35:1282:0:0:0,-10,-10 0|0:98.5437:22:22:793:0:0:0,-6.62266,-10 0|0:99:29:29:1056:0:0:0,-8.72987,-10 0|0:99:31:29:1025:0:0:0,-8.72987,-10 0|0:99:34:34:1256:0:0:0,-10,-10 0|0:71.4526:13:13:480:0:0:0,-3.91339,-10 0|0:99:62:62:2258:0:0:0,-10,-10 0|0:99:25:25:901:0:0:0,-7.52575,-10 0|0:71.4526:13:13:477:0:0:0,-3.91339,-10 0|0:99:54:54:1944:0:0:0,-10,-10 0|0:86.504:18:18:667:0:0:0,-5.41854,-10 0|0:99:46:46:1647:0:0:0,-10,-10 0|0:89.5142:19:19:702:0:0:0,-5.71957,-10 0|0:74.4629:14:14:506:0:0:0,-4.21442,-10 0|0:99:60:60:2199:0:0:0,-10,-10 0|0:98.5437:22:22:809:0:0:0,-6.62266,-10 0|0:99:30:30:1097:0:0:0,-9.0309,-10 0|0:59.4114:9:9:341:0:0:0,-2.70927,-10 0|0:92.5225:20:20:751:0:0:0,-6.0206,-10 0|0:83.4937:17:17:628:0:0:0,-5.11751,-10 0|0:99:42:42:1558:0:0:0,-10,-10 0|0:99:26:26:957:0:0:0,-7.82678,-10 0|0:99:56:56:2081:0:0:0,-10,-10 0|0:99:30:30:1086:0:0:0,-9.0309,-10 0|0:77.4731:15:15:534:0:0:0,-4.51545,-10 0|0:99:39:39:1399:0:0:0,-10,-10 0|0:98.5437:22:22:814:0:0:0,-6.62266,-10 0|0:53.3908:7:7:250:0:0:0,-2.10721,-10 0|0:99:43:43:1480:0:0:0,-10,-10 0|0:68.4423:12:12:426:0:0:0,-3.61236,-10 0|0:80.4833:16:16:604:0:0:0,-4.81648,-10 0|0:99:41:41:1505:0:0:0,-10,-10 0|0:99:30:30:1071:0:0:0,-9.0309,-10 0|0:89.5142:19:19:683:0:0:0,-5.71957,-10 0|0:99:48:48:1801:0:0:0,-10,-10 0|0:99:23:23:814:0:0:0,-6.92369,-10 0|0:99:23:23:871:0:0:0,-6.92369,-10 0|1:0.0015201:16:0:0:16:572:-10,-4.81648,0 0|0:47.3702:5:5:190:0:0:0,-1.50515,-10 0|0:68.4423:12:12:454:0:0:0,-3.61236,-10 0|0:99:51:51:1869:0:0:0,-10,-10 0|0:99:29:29:1080:0:0:0,-8.72987,-10 0|1:99:18:7:256:11:416:-10,0,-10 0|0:99:37:37:1355:0:0:0,-10,-10 0|0:99:36:35:1296:0:0:0,-10,-10 0|0:56.4011:8:8:293:0:0:0,-2.40824,-10 0|0:98.5437:22:22:817:0:0:0,-6.62266,-10 0|0:99:23:23:821:0:0:0,-6.92369,-10 0|0:56.4011:8:8:289:0:0:0,-2.40824,-10 0|0:99:25:25:898:0:0:0,-7.52575,-10 0|0:89.5142:20:19:692:0:0:0,-5.71957,-10 0|0:92.5225:20:20:729:0:0:0,-6.0206,-10 scaffold_352 442607 . C G 661.984 . AB=0.794118;ABP=28.557;AC=2;AF=0.0108696;AN=184;AO=27;CIGAR=2X;DP=2428;DPB=2428;DPRA=0.639098;EPP=3.09072;EPPR=9.42114;GTI=1;LEN=1;MEANALT=1;MQM=59.8519;MQMR=59.828;NS=92;NUMALT=1;ODDS=7.95718;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=988;QR=87362;RO=2390;RPP=61.6401;RPPR=5158.14;RUN=1;SAF=14;SAP=3.09072;SAR=13;SRF=1157;SRP=8.25818;SRR=1233;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0|0:62.4217:10:10:368:0:0:0,-3.0103,-10 0|0:68.4423:12:12:430:0:0:0,-3.61236,-10 0|0:95.5342:21:21:778:0:0:0,-6.32163,-10 0|0:74.4629:14:14:484:0:0:0,-4.21442,-10 0|0:74.4629:15:14:524:0:0:0,-4.21442,-10 0|0:92.5225:20:20:755:0:0:0,-6.0206,-10 0|0:99:54:54:1969:0:0:0,-10,-10 0|0:99:32:32:1203:0:0:0,-9.63296,-10 0|0:77.4731:15:15:540:0:0:0,-4.51545,-10 0|0:38.3393:2:2:76:0:0:0,-0.60206,-7.22 0|0:83.4937:18:17:616:0:0:0,-5.11751,-10 0|0:71.4526:13:13:473:0:0:0,-3.91339,-10 0|0:99:40:40:1452:0:0:0,-10,-10 0|0:99:36:36:1312:0:0:0,-10,-10 0|0:99:34:34:1237:0:0:0,-10,-10 0|0:99:36:35:1307:0:0:0,-10,-10 0|0:99:38:37:1388:0:0:0,-10,-10 0|0:99:26:26:952:0:0:0,-7.82678,-10 0|0:99:26:26:961:0:0:0,-7.82678,-10 0|0:99:45:45:1634:0:0:0,-10,-10 0|0:99:27:27:927:0:0:0,-8.12781,-10 0|0:99:36:36:1335:0:0:0,-10,-10 0|0:65.432:11:11:404:0:0:0,-3.31133,-10 0|0:95.5342:21:21:773:0:0:0,-6.32163,-10 0|0:99:37:37:1372:0:0:0,-10,-10 0|0:99:40:40:1503:0:0:0,-10,-10 0|0:99:26:26:945:0:0:0,-7.82678,-10 0|0:83.4937:17:17:628:0:0:0,-5.11751,-10 0|0:99:24:24:875:0:0:0,-7.22472,-10 0|0:99:49:49:1757:0:0:0,-10,-10 0|0:59.4114:9:9:340:0:0:0,-2.70927,-10 0|0:86.504:18:18:639:0:0:0,-5.41854,-10 0|0:99:36:35:1292:0:0:0,-10,-10 0|0:86.504:18:18:672:0:0:0,-5.41854,-10 0|0:95.5342:21:21:752:0:0:0,-6.32163,-10 0|0:56.4011:9:8:296:0:0:0,-2.40824,-10 0|0:99:24:24:879:0:0:0,-7.22472,-10 0|0:99:43:43:1561:0:0:0,-10,-10 0|0:99:30:30:1090:0:0:0,-9.0309,-10 0|0:99:29:29:1071:0:0:0,-8.72987,-10 0|0:99:36:35:1282:0:0:0,-10,-10 0|0:98.5437:22:22:793:0:0:0,-6.62266,-10 0|0:99:29:29:1056:0:0:0,-8.72987,-10 0|0:99:31:29:1025:0:0:0,-8.72987,-10 0|0:99:34:34:1256:0:0:0,-10,-10 0|0:71.4526:13:13:480:0:0:0,-3.91339,-10 0|0:99:62:62:2258:0:0:0,-10,-10 0|0:99:25:25:901:0:0:0,-7.52575,-10 0|0:71.4526:13:13:477:0:0:0,-3.91339,-10 0|0:99:54:54:1944:0:0:0,-10,-10 0|0:86.504:18:18:667:0:0:0,-5.41854,-10 0|0:99:46:46:1647:0:0:0,-10,-10 0|0:89.5142:19:19:702:0:0:0,-5.71957,-10 0|0:74.4629:14:14:506:0:0:0,-4.21442,-10 0|0:99:60:60:2199:0:0:0,-10,-10 0|0:98.5437:22:22:809:0:0:0,-6.62266,-10 0|0:99:30:30:1097:0:0:0,-9.0309,-10 0|0:59.4114:9:9:341:0:0:0,-2.70927,-10 0|0:92.5225:20:20:751:0:0:0,-6.0206,-10 0|0:83.4937:17:17:628:0:0:0,-5.11751,-10 0|0:99:42:42:1558:0:0:0,-10,-10 0|0:99:26:26:957:0:0:0,-7.82678,-10 0|0:99:56:56:2081:0:0:0,-10,-10 0|0:99:30:30:1086:0:0:0,-9.0309,-10 0|0:77.4731:15:15:534:0:0:0,-4.51545,-10 0|0:99:39:39:1399:0:0:0,-10,-10 0|0:98.5437:22:22:814:0:0:0,-6.62266,-10 0|0:53.3908:7:7:250:0:0:0,-2.10721,-10 0|0:99:43:43:1480:0:0:0,-10,-10 0|0:68.4423:12:12:426:0:0:0,-3.61236,-10 0|0:80.4833:16:16:604:0:0:0,-4.81648,-10 0|0:99:41:41:1505:0:0:0,-10,-10 0|0:99:30:30:1071:0:0:0,-9.0309,-10 0|0:89.5142:19:19:683:0:0:0,-5.71957,-10 0|0:99:48:48:1801:0:0:0,-10,-10 0|0:99:23:23:814:0:0:0,-6.92369,-10 0|0:99:23:23:871:0:0:0,-6.92369,-10 0|1:0.0015201:16:0:0:16:572:-10,-4.81648,0 0|0:47.3702:5:5:190:0:0:0,-1.50515,-10 0|0:68.4423:12:12:454:0:0:0,-3.61236,-10 0|0:99:51:51:1869:0:0:0,-10,-10 0|0:99:29:29:1080:0:0:0,-8.72987,-10 0|1:99:18:7:256:11:416:-10,0,-10 0|0:99:37:37:1355:0:0:0,-10,-10 0|0:99:36:35:1296:0:0:0,-10,-10 0|0:56.4011:8:8:293:0:0:0,-2.40824,-10 0|0:98.5437:22:22:817:0:0:0,-6.62266,-10 0|0:99:23:23:821:0:0:0,-6.92369,-10 0|0:56.4011:8:8:289:0:0:0,-2.40824,-10 0|0:99:25:25:898:0:0:0,-7.52575,-10 0|0:89.5142:20:19:692:0:0:0,-5.71957,-10 0|0:92.5225:20:20:729:0:0:0,-6.0206,-10 scaffold_365 89545 . G C 300.458 . AB=0.555556;ABP=3.73412;AC=2;AF=0.0108696;AN=184;AO=15;CIGAR=1X;DP=1386;DPB=1386;DPRA=0.89404;EPP=4.31318;EPPR=4.08177;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9511;NS=92;NUMALT=1;ODDS=7.38;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=515;QR=50312;RO=1370;RPP=35.5824;RPPR=2960.58;RUN=1;SAF=9;SAP=4.31318;SAR=6;SRF=696;SRP=3.77745;SRR=674;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:68.1835:13:13:456:0:0:0,-3.91339,-10 0/0:77.2143:16:16:572:0:0:0,-4.81648,-10 0/0:59.1526:10:10:380:0:0:0,-3.0103,-10 0/0:44.1011:5:5:186:0:0:0,-1.50515,-10 0/0:53.132:8:8:304:0:0:0,-2.40824,-10 0/0:50.1217:7:7:244:0:0:0,-2.10721,-10 0/0:99:35:35:1275:0:0:0,-10,-10 0/0:86.2452:19:19:718:0:0:0,-5.71957,-10 0/0:74.2041:15:15:568:0:0:0,-4.51545,-10 0/0:32.0599:1:1:38:0:0:0,-0.30103,-3.8 0/0:41.0908:4:4:152:0:0:0,-1.20412,-10 0/0:41.0908:4:4:123:0:0:0,-1.20412,-10 0/0:89.2554:20:20:719:0:0:0,-6.0206,-10 0/0:99:28:28:1043:0:0:0,-8.42884,-10 0/0:83.2349:18:18:680:0:0:0,-5.41854,-10 0/0:89.2554:20:20:732:0:0:0,-6.0206,-10 0/0:95.2753:22:22:836:0:0:0,-6.62266,-10 0/0:59.1526:10:10:356:0:0:0,-3.0103,-10 0/0:53.132:8:8:304:0:0:0,-2.40824,-10 0/0:99:27:27:976:0:0:0,-8.12781,-10 0/0:86.2452:19:19:704:0:0:0,-5.71957,-10 0/0:99:27:27:987:0:0:0,-8.12781,-10 0/0:44.1011:5:5:188:0:0:0,-1.50515,-10 0/0:56.1423:9:9:342:0:0:0,-2.70927,-10 0/0:71.1938:14:14:507:0:0:0,-4.21442,-10 0/0:83.2349:18:18:656:0:0:0,-5.41854,-10 0/0:71.1938:14:14:490:0:0:0,-4.21442,-10 0/0:56.1423:9:9:320:0:0:0,-2.70927,-10 0/0:77.2143:16:16:586:0:0:0,-4.81648,-10 0/0:95.2753:22:22:809:0:0:0,-6.62266,-10 0/0:56.1423:9:9:324:0:0:0,-2.70927,-10 0/0:38.0805:3:3:110:0:0:0,-0.90309,-10 0/0:68.1835:13:13:487:0:0:0,-3.91339,-10 0/0:62.1629:11:11:390:0:0:0,-3.31133,-10 0/0:71.1938:14:14:530:0:0:0,-4.21442,-10 0/0:44.1011:5:5:183:0:0:0,-1.50515,-10 0/0:56.1423:9:9:335:0:0:0,-2.70927,-10 0/0:86.2452:19:19:692:0:0:0,-5.71957,-10 0/0:92.2654:21:21:783:0:0:0,-6.32163,-10 0/0:80.2246:17:17:620:0:0:0,-5.11751,-10 0/0:95.2753:22:22:795:0:0:0,-6.62266,-10 0/0:62.1629:11:11:374:0:0:0,-3.31133,-10 0/0:62.1629:11:11:406:0:0:0,-3.31133,-10 0/0:95.2753:22:22:800:0:0:0,-6.62266,-10 0/0:86.2452:19:19:693:0:0:0,-5.71957,-10 0/0:68.1835:13:13:481:0:0:0,-3.91339,-10 0/0:99:33:33:1182:0:0:0,-9.93399,-10 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:59.1526:10:10:373:0:0:0,-3.0103,-10 0/0:99:26:26:960:0:0:0,-7.82678,-10 0/0:59.1526:10:10:380:0:0:0,-3.0103,-10 0/0:99:25:25:932:0:0:0,-7.52575,-10 0/0:80.2246:17:17:641:0:0:0,-5.11751,-10 0/0:47.1114:6:6:228:0:0:0,-1.80618,-10 0/0:99:34:34:1234:0:0:0,-10,-10 0/0:44.1011:5:5:183:0:0:0,-1.50515,-10 0/0:80.2246:17:17:638:0:0:0,-5.11751,-10 0/0:56.1423:9:9:316:0:0:0,-2.70927,-10 0/0:65.1732:12:12:447:0:0:0,-3.61236,-10 0/0:68.1835:13:13:487:0:0:0,-3.91339,-10 0/1:99:20:12:446:8:281:-10,0,-10 0/0:65.1732:12:12:455:0:0:0,-3.61236,-10 0/0:99:24:24:897:0:0:0,-7.22472,-10 0/0:74.2041:15:15:554:0:0:0,-4.51545,-10 0/0:47.1114:6:6:227:0:0:0,-1.80618,-10 0/0:99:29:29:1011:0:0:0,-8.72987,-10 0/0:74.2041:15:15:556:0:0:0,-4.51545,-10 0/1:6.30139e-06:7:0:0:7:234:-10,-2.10721,0 0/0:89.2554:20:20:754:0:0:0,-6.0206,-10 0/0:62.1629:11:11:416:0:0:0,-3.31133,-10 0/0:83.2349:18:18:673:0:0:0,-5.41854,-10 0/0:99:31:30:1112:0:0:0,-9.0309,-10 0/0:71.1938:14:14:526:0:0:0,-4.21442,-10 0/0:77.2143:16:16:587:0:0:0,-4.81648,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:38.0805:3:3:114:0:0:0,-0.90309,-10 0/0:59.1526:10:10:351:0:0:0,-3.0103,-10 0/0:68.1835:13:13:490:0:0:0,-3.91339,-10 0/0:32.0599:1:1:38:0:0:0,-0.30103,-3.8 0/0:47.1114:6:6:216:0:0:0,-1.80618,-10 0/0:99:33:33:1188:0:0:0,-9.93399,-10 0/0:77.2143:16:16:600:0:0:0,-4.81648,-10 0/0:99:28:28:992:0:0:0,-8.42884,-10 0/0:83.2349:18:18:650:0:0:0,-5.41854,-10 0/0:77.2143:16:16:603:0:0:0,-4.81648,-10 0/0:41.0908:4:4:152:0:0:0,-1.20412,-10 0/0:53.132:8:8:300:0:0:0,-2.40824,-10 0/0:65.1732:12:12:452:0:0:0,-3.61236,-10 0/0:53.132:8:8:287:0:0:0,-2.40824,-10 0/0:62.1629:11:11:418:0:0:0,-3.31133,-10 0/0:74.2041:15:15:523:0:0:0,-4.51545,-10 0/0:83.2349:18:18:675:0:0:0,-5.41854,-10 scaffold_365 146513 . T G 162.1 . AB=0.275862;ABP=15.6647;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1X;DP=1936;DPB=1936;DPRA=1.38385;EPP=3.0103;EPPR=9.18423;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=12.3027;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=297;QR=70265;RO=1926;RPP=20.3821;RPPR=4176.58;RUN=1;SAF=4;SAP=3.0103;SAR=4;SRF=927;SRP=8.85501;SRR=999;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:89.5533:14:14:497:0:0:0,-4.21442,-10 0/0:89.5533:14:14:497:0:0:0,-4.21442,-10 0/0:99:35:35:1276:0:0:0,-10,-10 0/0:95.5732:16:16:600:0:0:0,-4.81648,-10 0/0:99:19:19:668:0:0:0,-5.71957,-10 0/0:80.5225:11:11:416:0:0:0,-3.31133,-10 0/0:99:41:41:1523:0:0:0,-10,-10 0/0:99:25:25:905:0:0:0,-7.52575,-10 0/0:77.5122:10:10:355:0:0:0,-3.0103,-10 0/0:53.4299:2:2:71:0:0:0,-0.60206,-6.745 0/0:65.4711:6:6:226:0:0:0,-1.80618,-10 0/0:59.4505:4:4:152:0:0:0,-1.20412,-10 0/0:99:42:42:1482:0:0:0,-10,-10 0/0:99:36:36:1355:0:0:0,-10,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/0:99:43:43:1594:0:0:0,-10,-10 0/0:99:21:21:770:0:0:0,-6.32163,-10 0/0:86.5431:13:13:480:0:0:0,-3.91339,-10 0/0:99:22:22:808:0:0:0,-6.62266,-10 0/0:99:35:35:1267:0:0:0,-10,-10 0/0:99:20:19:706:0:0:0,-5.71957,-10 0/0:99:34:34:1247:0:0:0,-10,-10 0/0:71.4917:8:8:301:0:0:0,-2.40824,-10 0/0:99:24:24:854:0:0:0,-7.22472,-10 0/0:99:30:30:1093:0:0:0,-9.0309,-10 0/0:99:25:25:924:0:0:0,-7.52575,-10 0/0:99:25:25:904:0:0:0,-7.52575,-10 0/0:99:18:18:632:0:0:0,-5.41854,-10 0/0:95.5732:16:16:552:0:0:0,-4.81648,-10 0/0:99:41:41:1438:0:0:0,-10,-10 0/0:71.4917:8:8:299:0:0:0,-2.40824,-10 0/0:56.4402:3:3:109:0:0:0,-0.90309,-10 0/0:99:18:18:636:0:0:0,-5.41854,-10 0/0:86.5431:13:13:441:0:0:0,-3.91339,-10 0/0:99:23:23:861:0:0:0,-6.92369,-10 0/0:74.502:9:9:307:0:0:0,-2.70927,-10 0/0:98.5826:17:17:623:0:0:0,-5.11751,-10 0/0:99:24:24:880:0:0:0,-7.22472,-10 0/0:99:20:20:690:0:0:0,-6.0206,-10 0/0:99:21:21:789:0:0:0,-6.32163,-10 0/0:99:37:37:1331:0:0:0,-10,-10 0/0:83.5326:12:12:429:0:0:0,-3.61236,-10 0/0:99:25:25:912:0:0:0,-7.52575,-10 0/0:99:37:37:1362:0:0:0,-10,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:99:20:20:755:0:0:0,-6.0206,-10 0/0:99:42:42:1558:0:0:0,-10,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:99:18:18:679:0:0:0,-5.41854,-10 0/0:99:37:37:1306:0:0:0,-10,-10 0/0:80.5225:11:11:406:0:0:0,-3.31133,-10 0/0:99:28:28:1022:0:0:0,-8.42884,-10 0/0:95.5732:16:16:584:0:0:0,-4.81648,-10 0/0:74.502:9:9:342:0:0:0,-2.70927,-10 0/0:99:38:38:1406:0:0:0,-10,-10 0/0:98.5826:17:17:618:0:0:0,-5.11751,-10 0/0:99:19:19:719:0:0:0,-5.71957,-10 0/0:62.4608:5:5:123:0:0:0,-1.50515,-10 0/0:89.5533:15:14:531:0:0:0,-4.21442,-10 0/0:89.5533:14:14:503:0:0:0,-4.21442,-10 0/0:99:28:28:1047:0:0:0,-8.42884,-10 0/0:99:19:19:696:0:0:0,-5.71957,-10 0/0:99:53:53:1925:0:0:0,-10,-10 0/0:99:24:24:889:0:0:0,-7.22472,-10 0/0:95.5732:16:16:585:0:0:0,-4.81648,-10 0/0:99:29:29:1051:0:0:0,-8.72987,-10 0/0:95.5732:16:16:601:0:0:0,-4.81648,-10 0/0:77.5122:10:10:352:0:0:0,-3.0103,-10 0/0:99:44:44:1598:0:0:0,-10,-10 0/0:89.5533:14:14:526:0:0:0,-4.21442,-10 0/0:99:19:19:707:0:0:0,-5.71957,-10 0/0:99:20:20:760:0:0:0,-6.0206,-10 0/1:99:29:21:753:8:297:-10,0,-10 0/0:89.5533:14:14:528:0:0:0,-4.21442,-10 0/0:99:28:28:1028:0:0:0,-8.42884,-10 0/0:62.4608:5:5:182:0:0:0,-1.50515,-10 0/0:71.4917:8:8:304:0:0:0,-2.40824,-10 0/0:95.5732:16:16:598:0:0:0,-4.81648,-10 0/0:71.4917:8:8:304:0:0:0,-2.40824,-10 0/0:77.5122:10:10:371:0:0:0,-3.0103,-10 0/0:99:37:37:1318:0:0:0,-10,-10 0/0:99:29:29:1027:0:0:0,-8.72987,-10 0/0:99:18:18:678:0:0:0,-5.41854,-10 0/0:99:22:22:808:0:0:0,-6.62266,-10 0/0:95.5732:16:16:580:0:0:0,-4.81648,-10 0/0:74.502:9:9:318:0:0:0,-2.70927,-10 0/0:77.5122:10:10:347:0:0:0,-3.0103,-10 0/0:99:19:19:713:0:0:0,-5.71957,-10 0/0:62.4608:5:5:188:0:0:0,-1.50515,-10 0/0:99:22:22:828:0:0:0,-6.62266,-10 0/0:92.5616:15:15:531:0:0:0,-4.51545,-10 0/0:99:25:25:886:0:0:0,-7.52575,-10 scaffold_365 152376 . C A 568.892 . AB=0.741935;ABP=18.771;AC=2;AF=0.0108696;AN=184;AO=25;CIGAR=1X;DP=2024;DPB=2024;DPRA=0.988126;EPP=7.26639;EPPR=7.89638;GTI=1;LEN=1;MEANALT=1;MQM=59.04;MQMR=59.9424;NS=92;NUMALT=1;ODDS=8.09587;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=906;QR=73470;RO=1995;RPP=57.2971;RPPR=4205.79;RUN=1;SAF=9;SAP=7.26639;SAR=16;SRF=977;SRP=4.84;SRR=1018;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:87.1063:19:19:669:0:0:0,-5.71957,-10 0/0:78.0754:16:16:604:0:0:0,-4.81648,-10 0/0:99:27:27:972:0:0:0,-8.12781,-10 0/0:57.0033:9:9:342:0:0:0,-2.70927,-10 0/0:75.0651:15:15:541:0:0:0,-4.51545,-10 0/0:66.0342:12:12:427:0:0:0,-3.61236,-10 0/0:99:39:39:1466:0:0:0,-10,-10 0/0:96.1365:22:22:819:0:0:0,-6.62266,-10 0/0:75.0651:15:15:569:0:0:0,-4.51545,-10 0/0:38.9415:3:3:114:0:0:0,-0.90309,-10 0/0:60.0136:10:10:366:0:0:0,-3.0103,-10 0/0:60.0136:10:10:377:0:0:0,-3.0103,-10 0/0:99:45:45:1656:0:0:0,-10,-10 0/0:99:52:52:1901:0:0:0,-10,-10 0/0:99:35:34:1263:1:16:0,-7.39198,-10 0/0:99:23:23:870:0:0:0,-6.92369,-10 0/0:99:29:29:1082:0:0:0,-8.72987,-10 0/0:66.0342:12:12:455:0:0:0,-3.61236,-10 0/0:99:29:29:1061:0:0:0,-8.72987,-10 0/0:99:56:56:2066:0:0:0,-10,-10 0/0:99:37:37:1343:0:0:0,-10,-10 0/0:99:30:30:1136:0:0:0,-9.0309,-10 0/0:50.9827:7:7:266:0:0:0,-2.10721,-10 0/0:99:28:28:1041:0:0:0,-8.42884,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:96.1365:22:22:817:0:0:0,-6.62266,-10 0/0:75.0651:15:15:544:0:0:0,-4.51545,-10 0/0:78.0754:16:16:584:0:0:0,-4.81648,-10 0/0:99:47:47:1730:0:0:0,-10,-10 0/0:50.9827:7:7:262:0:0:0,-2.10721,-10 0/0:44.9621:5:5:165:0:0:0,-1.50515,-10 0/0:81.0857:17:17:635:0:0:0,-5.11751,-10 0/0:63.0239:11:11:413:0:0:0,-3.31133,-10 0/0:96.1365:22:22:801:0:0:0,-6.62266,-10 0/0:50.9827:7:7:244:0:0:0,-2.10721,-10 0/0:90.1165:20:20:713:0:0:0,-6.0206,-10 0/0:96.1365:23:22:805:0:0:0,-6.62266,-10 0/0:57.0033:9:9:331:0:0:0,-2.70927,-10 0/0:87.1063:19:19:694:0:0:0,-5.71957,-10 0/0:99:29:29:1057:0:0:0,-8.72987,-10 0/0:99:23:23:869:0:0:0,-6.92369,-10 0/0:99:25:25:942:0:0:0,-7.52575,-10 0/0:99:37:36:1320:0:0:0,-10,-10 0/0:99:30:30:1062:0:0:0,-9.0309,-10 0/0:75.0651:15:15:531:0:0:0,-4.51545,-10 0/0:99:48:48:1751:0:0:0,-10,-10 0/0:87.1063:19:19:700:0:0:0,-5.71957,-10 0/0:90.1165:20:20:735:0:0:0,-6.0206,-10 0/0:99:34:34:1207:0:0:0,-10,-10 0/0:72.0548:14:14:509:0:0:0,-4.21442,-10 0/0:99:34:34:1193:0:0:0,-10,-10 0/0:53.993:8:8:300:0:0:0,-2.40824,-10 0/0:69.0445:13:13:462:0:0:0,-3.91339,-10 0/0:99:55:55:2047:0:0:0,-10,-10 0/0:84.096:18:18:634:0:0:0,-5.41854,-10 0/0:75.0651:15:15:561:0:0:0,-4.51545,-10 0/0:53.993:8:8:304:0:0:0,-2.40824,-10 0/1:0.00132322:15:0:0:15:570:-10,-4.51545,0 0/0:57.0033:9:9:332:0:0:0,-2.70927,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:99:39:39:1385:0:0:0,-10,-10 0/1:99:16:8:303:8:304:-10,0,-10 0/0:60.0136:10:10:375:0:0:0,-3.0103,-10 0/0:99:31:30:1119:0:0:0,-9.0309,-10 0/0:93.1266:21:21:746:0:0:0,-6.32163,-10 0/0:66.0342:12:12:431:0:0:0,-3.61236,-10 0/0:99:49:49:1804:0:0:0,-10,-10 0/0:66.0342:12:12:437:0:0:0,-3.61236,-10 0/0:81.0857:17:17:617:0:0:0,-5.11751,-10 0/0:99:27:27:1000:0:0:0,-8.12781,-10 0/0:99:29:29:1072:0:0:0,-8.72987,-10 0/0:69.0445:13:13:475:0:0:0,-3.91339,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:81.0857:17:17:636:0:0:0,-5.11751,-10 0/0:96.1365:22:22:821:0:0:0,-6.62266,-10 0/0:81.0857:17:17:642:0:0:0,-5.11751,-10 0/0:60.0136:10:10:365:0:0:0,-3.0103,-10 0/0:60.0136:10:10:380:0:0:0,-3.0103,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:90.1165:20:20:758:0:0:0,-6.0206,-10 0/0:90.1165:20:20:755:0:0:0,-6.0206,-10 0/0:90.1165:20:20:746:0:0:0,-6.0206,-10 0/0:63.044:21:20:757:1:16:0,-3.39941,-10 0/0:72.0548:14:14:524:0:0:0,-4.21442,-10 0/0:69.0445:13:13:494:0:0:0,-3.91339,-10 0/0:81.0857:17:17:634:0:0:0,-5.11751,-10 0/0:50.9827:7:7:266:0:0:0,-2.10721,-10 0/0:99:25:24:905:0:0:0,-7.22472,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 scaffold_365 152405 . G A 669.931 . AB=0.446429;ABP=4.40625;AC=2;AF=0.0108696;AN=184;AO=26;CIGAR=1X;DP=2012;DPB=2012;DPRA=1.27648;EPP=3.34437;EPPR=6.56451;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9184;NS=92;NUMALT=1;ODDS=8.10008;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=964;QR=72153;RO=1985;RPP=59.4686;RPPR=4313.38;RUN=1;SAF=14;SAP=3.34437;SAR=12;SRF=964;SRP=6.56451;SRR=1021;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:83.3449:19:19:692:0:0:0,-5.71957,-10 0/0:74.3143:16:16:578:0:0:0,-4.81648,-10 0/0:78.4216:27:26:956:1:16:0,-5.09645,-10 0/0:53.2422:9:9:332:0:0:0,-2.70927,-10 0/0:71.304:15:15:566:0:0:0,-4.51545,-10 0/0:59.2628:12:11:403:0:0:0,-3.31133,-10 0/0:99:39:39:1437:0:0:0,-10,-10 0/0:92.3757:22:22:791:0:0:0,-6.62266,-10 0/0:71.304:15:15:561:0:0:0,-4.51545,-10 0/0:35.1804:3:3:109:0:0:0,-0.90309,-10 0/0:56.2525:10:10:358:0:0:0,-3.0103,-10 0/0:56.2525:10:10:344:0:0:0,-3.0103,-10 0/0:99:44:44:1583:0:0:0,-10,-10 0/0:99:51:51:1837:0:0:0,-10,-10 0/0:99:35:35:1267:0:0:0,-10,-10 0/0:95.3857:23:23:846:0:0:0,-6.92369,-10 0/0:99:29:29:1065:0:0:0,-8.72987,-10 0/0:62.2731:12:12:447:0:0:0,-3.61236,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:99:56:56:2052:0:0:0,-10,-10 0/0:99:37:37:1316:0:0:0,-10,-10 0/0:99:30:30:1109:0:0:0,-9.0309,-10 0/0:47.2216:7:7:266:0:0:0,-2.10721,-10 0/0:99:27:27:984:0:0:0,-8.12781,-10 0/0:95.3857:23:23:853:0:0:0,-6.92369,-10 0/0:99:30:30:1072:0:0:0,-9.0309,-10 0/0:92.3757:22:22:792:0:0:0,-6.62266,-10 0/0:71.304:15:15:553:0:0:0,-4.51545,-10 0/0:71.304:15:15:539:0:0:0,-4.51545,-10 0/0:99:47:47:1718:0:0:0,-10,-10 0/0:47.2216:7:7:258:0:0:0,-2.10721,-10 0/0:41.201:5:5:190:0:0:0,-1.50515,-10 0/0:77.3246:17:17:618:0:0:0,-5.11751,-10 0/0:59.2628:11:11:417:0:0:0,-3.31133,-10 0/0:92.3757:22:22:793:0:0:0,-6.62266,-10 0/0:47.2216:7:7:235:0:0:0,-2.10721,-10 0/0:86.355:20:20:749:0:0:0,-6.0206,-10 0/0:95.3857:23:23:867:0:0:0,-6.92369,-10 0/0:53.2422:9:9:342:0:0:0,-2.70927,-10 0/0:83.3449:19:19:668:0:0:0,-5.71957,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:95.3857:23:23:829:0:0:0,-6.92369,-10 0/0:98.3884:24:24:874:0:0:0,-7.22472,-10 0/0:99:37:37:1376:0:0:0,-10,-10 0/0:99:29:29:1032:0:0:0,-8.72987,-10 0/0:71.304:15:15:525:0:0:0,-4.51545,-10 0/0:99:47:47:1695:0:0:0,-10,-10 0/0:83.3449:19:19:703:0:0:0,-5.71957,-10 0/0:83.3449:19:19:674:0:0:0,-5.71957,-10 0/0:99:34:34:1248:0:0:0,-10,-10 0/0:68.2937:14:14:505:0:0:0,-4.21442,-10 0/0:99:34:34:1174:0:0:0,-10,-10 0/0:50.2319:8:8:298:0:0:0,-2.40824,-10 0/0:65.2834:13:13:465:0:0:0,-3.91339,-10 0/0:99:55:55:1996:0:0:0,-10,-10 0/0:80.3349:18:18:629:0:0:0,-5.41854,-10 0/0:71.304:15:15:561:0:0:0,-4.51545,-10 0/0:50.2319:8:8:300:0:0:0,-2.40824,-10 0/0:71.304:15:15:545:0:0:0,-4.51545,-10 0/0:53.2422:9:9:338:0:0:0,-2.70927,-10 0/0:99:29:29:1031:0:0:0,-8.72987,-10 0/0:95.3857:23:23:830:0:0:0,-6.92369,-10 0/0:99:38:38:1376:0:0:0,-10,-10 0/0:74.3143:16:16:545:0:0:0,-4.81648,-10 0/0:56.2525:10:10:358:0:0:0,-3.0103,-10 0/0:99:31:31:1138:0:0:0,-9.33193,-10 0/0:89.3656:21:21:754:0:0:0,-6.32163,-10 0/0:62.2731:12:12:422:0:0:0,-3.61236,-10 0/0:99:49:49:1830:0:0:0,-10,-10 0/0:62.2731:12:12:425:0:0:0,-3.61236,-10 0/0:77.3246:17:17:608:0:0:0,-5.11751,-10 0/1:99:27:15:547:12:454:-10,0,-10 0/1:99:29:16:576:13:494:-10,0,-10 0/0:65.2834:13:13:472:0:0:0,-3.91339,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:77.3246:17:17:630:0:0:0,-5.11751,-10 0/0:89.3656:21:21:776:0:0:0,-6.32163,-10 0/0:77.3246:17:17:604:0:0:0,-5.11751,-10 0/0:56.2525:10:10:355:0:0:0,-3.0103,-10 0/0:53.2422:9:9:327:0:0:0,-2.70927,-10 0/0:99:35:35:1309:0:0:0,-10,-10 0/0:86.355:20:20:749:0:0:0,-6.0206,-10 0/0:86.355:20:20:728:0:0:0,-6.0206,-10 0/0:86.355:20:20:720:0:0:0,-6.0206,-10 0/0:89.3656:21:21:702:0:0:0,-6.32163,-10 0/0:68.2937:14:14:517:0:0:0,-4.21442,-10 0/0:65.2834:13:13:487:0:0:0,-3.91339,-10 0/0:77.3246:17:17:609:0:0:0,-5.11751,-10 0/0:47.2216:7:7:219:0:0:0,-2.10721,-10 0/0:99:25:25:937:0:0:0,-7.52575,-10 0/0:99:27:27:979:0:0:0,-8.12781,-10 0/0:99:25:25:903:0:0:0,-7.52575,-10 scaffold_365 284140 . T C 641.061 . AB=0.508197;ABP=3.0459;AC=5;AF=0.0274725;AN=182;AO=31;CIGAR=1X;DP=1061;DPB=1061;DPRA=1.0492;EPP=3.08035;EPPR=3.26564;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9291;NS=91;NUMALT=1;ODDS=5.18273;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1054;QR=37151;RO=1029;RPP=70.3259;RPPR=2211.47;RUN=1;SAF=16;SAP=3.08035;SAR=15;SRF=523;SRP=3.62017;SRR=506;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.7033:12:12:430:0:0:0,-3.61236,-10 0/0:37.6415:7:6:212:0:0:0,-1.80618,-10 0/0:55.7033:12:12:449:0:0:0,-3.61236,-10 0/0:58.7136:13:13:452:0:0:0,-3.91339,-10 0/0:49.6827:10:10:371:0:0:0,-3.0103,-10 0/0:43.6621:8:8:296:0:0:0,-2.40824,-10 0/0:88.8162:23:23:828:0:0:0,-6.92369,-10 0/0:67.7445:16:16:606:0:0:0,-4.81648,-10 0/0:34.6312:5:5:188:0:0:0,-1.50515,-10 0/0:31.6209:4:4:142:0:0:0,-1.20412,-10 0/0:37.6415:6:6:224:0:0:0,-1.80618,-10 0/0:28.6106:3:3:114:0:0:0,-0.90309,-10 0/0:73.7651:18:18:670:0:0:0,-5.41854,-10 0/0:70.7548:17:17:636:0:0:0,-5.11751,-10 0/1:99:16:10:342:6:166:-10,0,-10 0/1:68.4375:11:8:265:3:114:-9.54615,0,-10 0/0:61.7239:14:14:520:0:0:0,-4.21442,-10 0/1:0.000233177:5:0:0:5:190:-10,-1.50515,0 0/0:76.7754:19:19:708:0:0:0,-5.71957,-10 0/0:99:32:32:1131:0:0:0,-9.63296,-10 0/0:43.6621:8:8:301:0:0:0,-2.40824,-10 0/0:55.7033:12:12:447:0:0:0,-3.61236,-10 0/0:28.6106:3:3:99:0:0:0,-0.90309,-9.24 0/0:46.6724:9:9:303:0:0:0,-2.70927,-10 0/0:49.6827:10:10:333:0:0:0,-3.0103,-10 0/0:79.7857:20:20:734:0:0:0,-6.0206,-10 0/0:67.7445:16:16:588:0:0:0,-4.81648,-10 0/0:31.6209:4:4:152:0:0:0,-1.20412,-10 0/0:52.693:11:11:417:0:0:0,-3.31133,-10 0/0:76.7754:19:19:642:0:0:0,-5.71957,-10 0/0:31.6209:4:4:143:0:0:0,-1.20412,-10 0/0:52.693:11:11:370:0:0:0,-3.31133,-10 0/0:49.6827:10:10:368:0:0:0,-3.0103,-10 0/0:28.6106:3:3:108:0:0:0,-0.90309,-10 0/0:70.7548:17:17:544:0:0:0,-5.11751,-10 0/0:22.59:1:1:21:0:0:0,-0.30103,-2.1 0/0:52.693:11:11:413:0:0:0,-3.31133,-10 0/0:64.7342:15:15:522:0:0:0,-4.51545,-10 0/0:52.693:11:11:382:0:0:0,-3.31133,-10 0/0:52.693:11:11:365:0:0:0,-3.31133,-10 0/0:79.7857:20:20:735:0:0:0,-6.0206,-10 0/0:49.6827:10:10:374:0:0:0,-3.0103,-10 0/0:61.7239:14:14:526:0:0:0,-4.21442,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:46.6724:9:9:331:0:0:0,-2.70927,-10 0/0:52.693:11:11:416:0:0:0,-3.31133,-10 0/0:88.8162:23:23:787:0:0:0,-6.92369,-10 0/0:43.6621:8:8:303:0:0:0,-2.40824,-10 0/0:34.6312:5:5:167:0:0:0,-1.50515,-10 0/0:73.7651:18:18:619:0:0:0,-5.41854,-10 0/0:43.6621:8:8:265:0:0:0,-2.40824,-10 0/0:67.7445:16:16:558:0:0:0,-4.81648,-10 0/0:55.7033:12:12:432:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:49.6827:10:10:376:0:0:0,-3.0103,-10 0/0:58.7136:13:13:437:0:0:0,-3.91339,-10 0/0:46.6724:9:9:338:0:0:0,-2.70927,-10 0/0:31.6209:4:4:150:0:0:0,-1.20412,-10 0/0:43.6621:8:8:302:0:0:0,-2.40824,-10 0/0:70.7548:17:17:626:0:0:0,-5.11751,-10 0/0:43.6621:8:8:298:0:0:0,-2.40824,-10 0/0:73.7651:18:18:670:0:0:0,-5.41854,-10 0/0:43.6621:8:8:266:0:0:0,-2.40824,-10 0/0:46.6724:9:9:328:0:0:0,-2.70927,-10 0/0:99:27:27:981:0:0:0,-8.12781,-10 0/0:55.7033:12:12:451:0:0:0,-3.61236,-10 0/0:46.6724:9:9:296:0:0:0,-2.70927,-10 0/0:52.693:11:11:412:0:0:0,-3.31133,-10 0/0:34.6312:5:5:185:0:0:0,-1.50515,-10 0/0:43.6621:8:8:243:0:0:0,-2.40824,-10 0/0:58.7136:13:13:470:0:0:0,-3.91339,-10 0/0:49.6827:10:10:380:0:0:0,-3.0103,-10 0/0:40.6518:7:7:266:0:0:0,-2.10721,-10 0/0:58.7136:13:13:450:0:0:0,-3.91339,-10 0/0:49.6827:10:10:368:0:0:0,-3.0103,-10 0/0:40.6518:7:7:242:0:0:0,-2.10721,-10 0/1:0.00373233:9:0:0:9:318:-10,-2.70927,0 0/0:37.6415:6:6:203:0:0:0,-1.80618,-10 0/0:40.6518:7:7:252:0:0:0,-2.10721,-10 0/1:99:20:12:447:8:266:-10,0,-10 0/0:70.7548:17:17:611:0:0:0,-5.11751,-10 0/0:67.7445:16:16:582:0:0:0,-4.81648,-10 0/0:43.6621:8:8:304:0:0:0,-2.40824,-10 0/0:55.7033:12:12:456:0:0:0,-3.61236,-10 0/0:25.6003:2:2:76:0:0:0,-0.60206,-7.22 0/0:52.693:11:11:411:0:0:0,-3.31133,-10 0/0:46.6724:9:9:342:0:0:0,-2.70927,-10 0/0:40.6518:7:7:259:0:0:0,-2.10721,-10 0/0:55.7033:12:12:439:0:0:0,-3.61236,-10 0/0:49.6827:10:10:378:0:0:0,-3.0103,-10 0/0:46.6724:9:9:340:0:0:0,-2.70927,-10 scaffold_365 284152 . T C 11135.7 . AB=0.490196;ABP=3.35092;AC=70;AF=0.384615;AN=182;AO=412;CIGAR=1X;DP=1062;DPB=1062;DPRA=1.2566;EPP=6.04614;EPPR=6.23562;GTI=1;LEN=1;MEANALT=1.04167;MQM=59.9927;MQMR=59.9104;NS=91;NUMALT=1;ODDS=0.256618;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=14710;QR=23334;RO=647;RPP=863.251;RPPR=1347.81;RUN=1;SAF=222;SAP=8.40736;SAR=190;SRF=315;SRP=3.98025;SRR=332;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/1:24.3777:12:1:38:11:408:-10,0,-1.26682 1/1:18.9772:7:0:0:7:262:-10,-2.10721,0 1/1:34.0287:12:0:0:12:455:-10,-3.61236,0 1/1:37.039:13:0:0:13:435:-10,-3.91339,0 0/0:34.6126:10:10:353:0:0:0,-3.0103,-10 0/0:28.592:8:8:304:0:0:0,-2.40824,-10 0/0:73.7465:23:23:853:0:0:0,-6.92369,-10 0/1:99:16:10:378:6:223:-10,0,-10 0/0:19.5611:5:5:189:0:0:0,-1.50515,-10 0/0:16.5508:4:4:152:0:0:0,-1.20412,-10 0/0:22.5714:6:6:228:0:0:0,-1.80618,-10 0/0:13.5405:3:3:114:0:0:0,-0.90309,-10 0/0:58.695:18:18:628:0:0:0,-5.41854,-10 0/1:99:17:7:262:10:349:-10,0,-10 0/1:99:16:6:194:10:379:-10,0,-10 0/0:40.6332:12:12:445:0:0:0,-3.61236,-10 0/0:46.6538:14:14:504:0:0:0,-4.21442,-10 0/0:19.5611:5:5:185:0:0:0,-1.50515,-10 0/0:61.7053:19:19:707:0:0:0,-5.71957,-10 0/1:99:32:20:706:12:417:-10,0,-10 0/0:28.592:8:8:281:0:0:0,-2.40824,-10 1/1:34.0287:12:0:0:12:425:-10,-3.61236,0 1/1:6.93604:3:0:0:3:80:-7.46667,-0.90309,0 0/1:99:9:3:109:6:222:-10,0,-9.38834 1/1:28.0081:10:0:0:10:328:-10,-3.0103,0 0/1:99:20:15:545:5:183:-10,0,-10 0/0:52.6744:16:16:554:0:0:0,-4.81648,-10 0/0:13.5405:3:3:114:0:0:0,-0.90309,-10 0/0:37.6229:11:11:415:0:0:0,-3.31133,-10 0/0:58.695:19:18:622:0:0:0,-5.41854,-10 0/0:16.5508:4:4:140:0:0:0,-1.20412,-10 0/0:37.6229:11:11:393:0:0:0,-3.31133,-10 0/0:34.6126:10:10:380:0:0:0,-3.0103,-10 0/0:13.5405:3:3:92:0:0:0,-0.90309,-8.58667 0/0:55.6847:17:17:583:0:0:0,-5.11751,-10 0/1:0.284012:1:0:0:1:32:-3.2,-0.30103,0 1/1:31.0184:11:0:0:11:412:-10,-3.31133,0 0/1:99:15:7:221:8:280:-10,0,-10 0/0:37.6229:11:11:404:0:0:0,-3.31133,-10 0/1:99:11:5:163:6:221:-10,0,-10 0/0:64.7156:20:20:702:0:0:0,-6.0206,-10 0/0:34.6126:10:10:366:0:0:0,-3.0103,-10 0/0:46.6538:14:14:496:0:0:0,-4.21442,-10 0/1:99:27:13:488:14:488:-10,0,-10 0/1:90.609:9:6:224:3:106:-9.10834,0,-10 0/1:99:12:7:260:5:181:-10,0,-10 0/1:99:23:9:308:14:512:-10,0,-10 1/1:21.9875:8:0:0:8:285:-10,-2.40824,0 1/1:12.9566:5:0:0:5:183:-10,-1.50515,0 1/1:52.0905:18:0:0:18:667:-10,-5.41854,0 0/0:28.592:8:8:295:0:0:0,-2.40824,-10 0/1:99:16:6:195:9:319:-10,0,-10 0/0:40.6332:12:12:439:0:0:0,-3.61236,-10 .:.:.:.:.:.:.:. 0/1:99:32:15:546:17:602:-10,0,-10 1/1:28.0081:10:0:0:10:335:-10,-3.0103,0 1/1:37.039:13:0:0:13:470:-10,-3.91339,0 1/1:24.9978:9:0:0:9:305:-10,-2.70927,0 0/0:16.5508:4:4:146:0:0:0,-1.20412,-10 1/1:21.9875:8:0:0:8:301:-10,-2.40824,0 0/1:99:17:7:253:10:360:-10,0,-10 1/1:21.9875:8:0:0:8:284:-10,-2.40824,0 0/1:99:18:13:487:5:184:-10,0,-10 1/1:21.9875:8:0:0:8:265:-10,-2.40824,0 1/1:24.9978:9:0:0:9:303:-10,-2.70927,0 0/1:99:27:15:531:12:456:-10,0,-10 1/1:34.0287:12:0:0:12:448:-10,-3.61236,0 0/0:31.6023:9:9:325:0:0:0,-2.70927,-10 0/1:99:10:6:212:4:146:-10,0,-10 0/0:19.5611:5:5:187:0:0:0,-1.50515,-10 0/0:28.592:8:8:268:0:0:0,-2.40824,-10 0/0:43.6435:13:13:459:0:0:0,-3.91339,-10 0/0:34.6126:10:10:377:0:0:0,-3.0103,-10 0/0:25.5817:7:7:261:0:0:0,-2.10721,-10 0/0:43.6435:13:13:414:0:0:0,-3.91339,-10 0/1:61.8351:10:8:281:2:76:-5.86291,0,-10 1/1:18.9772:7:0:0:7:204:-10,-2.10721,0 0/0:31.6023:9:9:337:0:0:0,-2.70927,-10 0/0:22.5714:6:6:222:0:0:0,-1.80618,-10 0/0:25.5817:7:7:264:0:0:0,-2.10721,-10 0/0:64.7156:20:20:721:0:0:0,-6.0206,-10 0/0:55.6847:17:17:625:0:0:0,-5.11751,-10 0/1:99:16:10:377:6:217:-10,0,-10 0/0:28.592:8:8:297:0:0:0,-2.40824,-10 0/1:99:12:7:266:5:184:-10,0,-10 0/0:10.5302:2:2:76:0:0:0,-0.60206,-7.22 1/1:31.0184:11:0:0:11:368:-10,-3.31133,0 1/1:24.9978:9:0:0:9:334:-10,-2.70927,0 0/1:35.0884:8:1:38:6:201:-10,0,-2.33789 0/1:99:12:5:185:7:247:-10,0,-10 0/1:99:10:4:150:6:228:-10,0,-10 1/1:24.9978:9:0:0:9:340:-10,-2.70927,0 scaffold_365 284156 . G A 193.969 . AB=0.473684;ABP=3.12459;AC=1;AF=0.00549451;AN=182;AO=9;CIGAR=1X;DP=1063;DPB=1063;DPRA=1.63793;EPP=5.18177;EPPR=3.11135;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9421;NS=91;NUMALT=1;ODDS=6.18582;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=328;QR=37996;RO=1053;RPP=22.5536;RPPR=2195.02;RUN=1;SAF=3;SAP=5.18177;SAR=6;SRF=534;SRP=3.47429;SRR=519;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.0081:12:12:447:0:0:0,-3.61236,-10 0/0:44.9566:7:7:252:0:0:0,-2.10721,-10 0/0:60.0081:12:12:452:0:0:0,-3.61236,-10 0/0:63.0184:13:13:423:0:0:0,-3.91339,-10 0/0:53.9875:10:10:371:0:0:0,-3.0103,-10 0/0:47.9669:8:8:290:0:0:0,-2.40824,-10 0/0:93.1212:23:23:843:0:0:0,-6.92369,-10 0/0:72.0493:16:16:589:0:0:0,-4.81648,-10 0/0:38.936:5:5:190:0:0:0,-1.50515,-10 0/0:35.9257:4:4:145:0:0:0,-1.20412,-10 0/0:41.9463:6:6:225:0:0:0,-1.80618,-10 0/0:32.9154:3:3:114:0:0:0,-0.90309,-10 0/0:78.0699:18:18:649:0:0:0,-5.41854,-10 0/0:75.0596:17:17:617:0:0:0,-5.11751,-10 0/0:72.0493:16:16:525:0:0:0,-4.81648,-10 0/0:60.0081:12:12:446:0:0:0,-3.61236,-10 0/0:66.0287:14:14:526:0:0:0,-4.21442,-10 0/0:38.936:5:5:182:0:0:0,-1.50515,-10 0/1:99:19:10:361:9:328:-10,0,-10 0/0:99:32:32:1096:0:0:0,-9.63296,-10 0/0:47.9669:8:8:302:0:0:0,-2.40824,-10 0/0:60.0081:12:12:433:0:0:0,-3.61236,-10 0/0:32.9154:3:3:114:0:0:0,-0.90309,-10 0/0:50.9772:9:9:327:0:0:0,-2.70927,-10 0/0:53.9875:10:10:354:0:0:0,-3.0103,-10 0/0:84.0905:20:20:739:0:0:0,-6.0206,-10 0/0:72.0493:16:16:576:0:0:0,-4.81648,-10 0/0:32.9154:3:3:114:0:0:0,-0.90309,-10 0/0:56.9978:11:11:416:0:0:0,-3.31133,-10 0/0:81.0802:19:19:641:0:0:0,-5.71957,-10 0/0:35.9257:4:4:149:0:0:0,-1.20412,-10 0/0:56.9978:11:11:407:0:0:0,-3.31133,-10 0/0:53.9875:10:10:370:0:0:0,-3.0103,-10 0/0:32.9154:3:3:92:0:0:0,-0.90309,-8.58667 0/0:75.0596:17:17:604:0:0:0,-5.11751,-10 0/0:26.8948:1:1:38:0:0:0,-0.30103,-3.8 0/0:56.9978:11:11:396:0:0:0,-3.31133,-10 0/0:69.039:15:15:532:0:0:0,-4.51545,-10 0/0:56.9978:11:11:395:0:0:0,-3.31133,-10 0/0:56.9978:11:11:380:0:0:0,-3.31133,-10 0/0:84.0905:20:20:749:0:0:0,-6.0206,-10 0/0:53.9875:10:10:368:0:0:0,-3.0103,-10 0/0:66.0287:14:14:526:0:0:0,-4.21442,-10 0/0:99:27:27:967:0:0:0,-8.12781,-10 0/0:50.9772:9:9:331:0:0:0,-2.70927,-10 0/0:60.0081:12:12:451:0:0:0,-3.61236,-10 0/0:93.1212:23:23:769:0:0:0,-6.92369,-10 0/0:47.9669:8:8:304:0:0:0,-2.40824,-10 0/0:38.936:5:5:184:0:0:0,-1.50515,-10 0/0:78.0699:18:18:626:0:0:0,-5.41854,-10 0/0:47.9669:8:8:299:0:0:0,-2.40824,-10 0/0:72.0493:16:16:581:0:0:0,-4.81648,-10 0/0:56.9978:12:11:408:0:0:0,-3.31133,-10 .:.:.:.:.:.:.:. 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:53.9875:10:10:329:0:0:0,-3.0103,-10 0/0:63.0184:13:13:467:0:0:0,-3.91339,-10 0/0:50.9772:9:9:325:0:0:0,-2.70927,-10 0/0:35.9257:4:4:152:0:0:0,-1.20412,-10 0/0:47.9669:8:8:302:0:0:0,-2.40824,-10 0/0:75.0596:17:17:625:0:0:0,-5.11751,-10 0/0:47.9669:8:8:280:0:0:0,-2.40824,-10 0/0:78.0699:18:18:617:0:0:0,-5.41854,-10 0/0:47.9669:8:8:280:0:0:0,-2.40824,-10 0/0:50.9772:9:9:334:0:0:0,-2.70927,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:60.0081:12:12:451:0:0:0,-3.61236,-10 0/0:50.9772:9:9:324:0:0:0,-2.70927,-10 0/0:56.9978:11:11:409:0:0:0,-3.31133,-10 0/0:38.936:5:5:166:0:0:0,-1.50515,-10 0/0:47.9669:8:8:285:0:0:0,-2.40824,-10 0/0:63.0184:13:13:484:0:0:0,-3.91339,-10 0/0:53.9875:10:10:380:0:0:0,-3.0103,-10 0/0:44.9566:7:7:256:0:0:0,-2.10721,-10 0/0:63.0184:13:13:459:0:0:0,-3.91339,-10 0/0:53.9875:10:10:370:0:0:0,-3.0103,-10 0/0:44.9566:7:7:210:0:0:0,-2.10721,-10 0/0:50.9772:9:9:331:0:0:0,-2.70927,-10 0/0:41.9463:6:6:198:0:0:0,-1.80618,-10 0/0:44.9566:7:7:262:0:0:0,-2.10721,-10 0/0:84.0905:20:20:710:0:0:0,-6.0206,-10 0/0:75.0596:17:17:600:0:0:0,-5.11751,-10 0/0:72.0493:16:16:579:0:0:0,-4.81648,-10 0/0:47.9669:8:8:298:0:0:0,-2.40824,-10 0/0:60.0081:12:12:450:0:0:0,-3.61236,-10 0/0:29.9051:2:2:76:0:0:0,-0.60206,-7.22 0/0:56.9978:11:11:402:0:0:0,-3.31133,-10 0/0:50.9772:9:9:319:0:0:0,-2.70927,-10 0/0:47.9669:8:8:267:0:0:0,-2.40824,-10 0/0:60.0081:12:12:451:0:0:0,-3.61236,-10 0/0:53.9875:10:10:359:0:0:0,-3.0103,-10 0/0:50.9772:9:9:336:0:0:0,-2.70927,-10 scaffold_365 412657 . G A 6636.34 . AB=0.52381;ABP=3.94093;AC=23;AF=0.123656;AN=186;AO=245;CIGAR=1X;DP=1776;DPB=1776;DPRA=1.19421;EPP=5.57175;EPPR=3.01598;GTI=1;LEN=1;MEANALT=1.06667;MQM=59.9918;MQMR=59.9882;NS=93;NUMALT=1;ODDS=0.115483;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=8847;QR=55944;RO=1530;RPP=535.021;RPPR=3316.68;RUN=1;SAF=114;SAP=5.57175;SAR=131;SRF=763;SRP=3.03301;SRR=767;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:36.2812:11:11:371:0:0:0,-3.31133,-10 0/0:24.24:7:7:242:0:0:0,-2.10721,-10 0/0:87.4559:28:28:1028:0:0:0,-8.42884,-10 0/0:48.3224:15:15:546:0:0:0,-4.51545,-10 0/1:99:11:4:130:7:262:-10,0,-10 0/0:24.24:7:7:255:0:0:0,-2.10721,-10 0/1:99:43:19:715:24:855:-10,0,-10 0/0:69.3945:22:22:796:0:0:0,-6.62266,-10 0/0:39.2915:12:12:432:0:0:0,-3.61236,-10 0/0:12.1988:3:3:114:0:0:0,-0.90309,-10 0/0:27.2503:8:8:303:0:0:0,-2.40824,-10 0/0:18.2194:5:5:168:0:0:0,-1.50515,-10 0/1:99:39:20:703:19:705:-10,0,-10 0/0:99:40:40:1478:0:0:0,-10,-10 0/1:99:23:8:297:14:501:-10,0,-10 0/1:99:21:9:340:12:431:-10,0,-10 0/1:99:23:13:466:10:356:-10,0,-10 0/0:18.2194:5:5:177:0:0:0,-1.50515,-10 0/0:54.343:17:17:642:0:0:0,-5.11751,-10 0/0:99:37:37:1358:0:0:0,-10,-10 0/0:69.3945:22:22:795:0:0:0,-6.62266,-10 0/0:90.4658:29:29:1069:0:0:0,-8.72987,-10 0/0:30.2606:9:9:337:0:0:0,-2.70927,-10 0/0:60.3636:19:19:687:0:0:0,-5.71957,-10 0/0:69.3945:22:22:826:0:0:0,-6.62266,-10 0/0:81.4356:26:26:963:0:0:0,-7.82678,-10 0/0:48.3224:15:15:540:0:0:0,-4.51545,-10 0/0:39.2915:12:12:447:0:0:0,-3.61236,-10 0/0:63.3739:20:20:739:0:0:0,-6.0206,-10 0/0:99:41:41:1458:0:0:0,-10,-10 0/0:30.2606:9:9:342:0:0:0,-2.70927,-10 0/0:48.3224:15:15:544:0:0:0,-4.51545,-10 0/0:84.4458:27:27:930:0:0:0,-8.12781,-10 0/0:42.3018:13:13:463:0:0:0,-3.91339,-10 0/0:42.3018:13:13:472:0:0:0,-3.91339,-10 0/0:36.2812:11:11:395:0:0:0,-3.31133,-10 0/0:60.3636:19:19:692:0:0:0,-5.71957,-10 0/0:99:32:32:1196:0:0:0,-9.63296,-10 0/0:36.2812:11:11:416:0:0:0,-3.31133,-10 0/0:45.3121:14:14:530:0:0:0,-4.21442,-10 0/0:99:39:39:1465:0:0:0,-10,-10 1/1:52.9897:25:0:0:25:930:-10,-7.52575,0 0/0:54.343:17:17:631:0:0:0,-5.11751,-10 0/0:72.4048:23:23:860:0:0:0,-6.92369,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:36.2812:11:11:396:0:0:0,-3.31133,-10 0/0:99:46:46:1745:0:0:0,-10,-10 0/0:72.4048:23:23:861:0:0:0,-6.92369,-10 0/0:48.3224:15:15:539:0:0:0,-4.51545,-10 0/0:96.484:31:31:1132:0:0:0,-9.33193,-10 1/1:22.8867:15:0:0:15:532:-10,-4.51545,0 0/0:99:35:35:1284:0:0:0,-10,-10 0/0:45.3121:14:14:507:0:0:0,-4.21442,-10 0/0:15.2091:4:4:130:0:0:0,-1.20412,-10 0/0:75.4151:24:24:887:0:0:0,-7.22472,-10 0/0:45.3121:14:14:531:0:0:0,-4.21442,-10 0/0:84.4458:27:27:985:0:0:0,-8.12781,-10 0/0:30.2606:9:9:333:0:0:0,-2.70927,-10 1/1:28.9073:17:0:0:17:634:-10,-5.11751,0 0/0:51.3327:16:16:584:0:0:0,-4.81648,-10 0/0:99:35:35:1245:0:0:0,-10,-10 0/0:21.2297:6:6:206:0:0:0,-1.80618,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:48.3224:15:15:547:0:0:0,-4.51545,-10 0/0:51.3327:16:16:556:0:0:0,-4.81648,-10 0/0:78.4253:25:25:896:0:0:0,-7.52575,-10 0/0:54.343:17:17:622:0:0:0,-5.11751,-10 0/0:30.2606:9:9:341:0:0:0,-2.70927,-10 0/0:99:34:34:1182:0:0:0,-10,-10 0/0:27.2503:8:8:300:0:0:0,-2.40824,-10 0/0:27.2503:8:8:299:0:0:0,-2.40824,-10 1/1:65.0309:29:0:0:29:1043:-10,-8.72987,0 1/1:19.8764:14:0:0:14:509:-10,-4.21442,0 1/1:40.9485:21:0:0:21:731:-10,-6.32163,0 1/1:52.9897:25:0:0:25:890:-10,-7.52575,0 0/0:30.2606:9:9:337:0:0:0,-2.70927,-10 0/0:57.3533:18:18:658:0:0:0,-5.41854,-10 0/0:51.3327:16:16:606:0:0:0,-4.81648,-10 0/0:36.2812:11:11:384:0:0:0,-3.31133,-10 0/0:24.24:7:7:266:0:0:0,-2.10721,-10 0/0:99:43:43:1585:0:0:0,-10,-10 0/0:99:32:32:1161:0:0:0,-9.63296,-10 0/0:48.3224:15:15:546:0:0:0,-4.51545,-10 0/0:72.4048:23:23:843:0:0:0,-6.92369,-10 0/0:84.4458:27:27:1007:0:0:0,-8.12781,-10 0/0:15.2091:4:4:152:0:0:0,-1.20412,-10 0/0:39.2915:12:12:439:0:0:0,-3.61236,-10 0/0:45.3121:14:14:529:0:0:0,-4.21442,-10 0/1:99:13:8:288:5:189:-10,0,-10 0/0:54.343:17:17:618:0:0:0,-5.11751,-10 0/1:99:16:8:298:8:279:-10,0,-10 0/0:36.2812:11:11:376:0:0:0,-3.31133,-10 scaffold_386 15584 . A T 847.743 . AB=0.68;ABP=17.0814;AC=3;AF=0.0163043;AN=184;AO=36;CIGAR=1X;DP=1676;DPB=1676;DPRA=0.860739;EPP=3.25157;EPPR=4.28506;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9805;NS=92;NUMALT=1;ODDS=5.4953;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1276;QR=59705;RO=1637;RPP=81.1833;RPPR=3557.71;RUN=1;SAF=19;SAP=3.25157;SAR=17;SRF=803;SRP=4.28506;SRR=834;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.0257:13:13:470:0:0:0,-3.91339,-10 0/0:23.9124:2:2:75:0:0:0,-0.60206,-7.125 0/0:99:32:32:1138:0:0:0,-9.63296,-10 0/0:51.0051:11:11:392:0:0:0,-3.31133,-10 0/0:63.0463:15:15:566:0:0:0,-4.51545,-10 0/0:41.9742:8:8:248:0:0:0,-2.40824,-10 0/0:99:50:50:1784:0:0:0,-10,-10 0/0:63.0463:15:15:530:0:0:0,-4.51545,-10 0/0:60.036:14:14:487:0:0:0,-4.21442,-10 0/1:0.000334644:7:0:0:7:244:-10,-2.10721,0 0/1:0.00133873:9:0:0:9:329:-10,-2.70927,0 0/0:38.9639:7:7:253:0:0:0,-2.10721,-10 0/0:99:37:37:1402:0:0:0,-10,-10 0/1:99:34:16:568:18:671:-10,0,-10 0/0:99:27:27:996:0:0:0,-8.12781,-10 0/0:78.0978:20:20:705:0:0:0,-6.0206,-10 0/0:81.1081:21:21:779:0:0:0,-6.32163,-10 0/0:38.9639:7:7:264:0:0:0,-2.10721,-10 0/0:78.0978:20:20:715:0:0:0,-6.0206,-10 0/0:99:35:35:1249:0:0:0,-10,-10 0/0:75.0875:19:19:691:0:0:0,-5.71957,-10 0/0:75.0875:19:19:707:0:0:0,-5.71957,-10 0/0:41.9742:8:8:270:0:0:0,-2.40824,-10 0/0:63.0463:15:15:532:0:0:0,-4.51545,-10 0/0:72.0772:18:18:674:0:0:0,-5.41854,-10 0/0:99:32:32:1187:0:0:0,-9.63296,-10 0/0:60.036:14:14:512:0:0:0,-4.21442,-10 0/0:35.6657:14:13:478:1:16:0,-1.46829,-10 0/0:60.036:14:14:527:0:0:0,-4.21442,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:26.9227:3:3:113:0:0:0,-0.90309,-10 0/0:41.9742:8:8:300:0:0:0,-2.40824,-10 0/0:81.1081:21:21:756:0:0:0,-6.32163,-10 0/0:47.9948:11:10:346:0:0:0,-3.0103,-10 0/0:78.0978:20:20:750:0:0:0,-6.0206,-10 0/0:32.9433:5:5:190:0:0:0,-1.50515,-10 0/0:44.9845:9:9:342:0:0:0,-2.70927,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:87.1287:23:23:806:0:0:0,-6.92369,-10 0/0:41.9742:8:8:271:0:0:0,-2.40824,-10 0/0:96.1594:26:26:975:0:0:0,-7.82678,-10 0/0:57.0257:13:13:492:0:0:0,-3.91339,-10 0/0:72.0772:18:18:640:0:0:0,-5.41854,-10 0/0:99:35:35:1236:0:0:0,-10,-10 0/0:78.0978:20:20:750:0:0:0,-6.0206,-10 0/0:90.139:24:24:869:0:0:0,-7.22472,-10 0/0:99:37:37:1321:0:0:0,-10,-10 0/0:81.1081:21:21:792:0:0:0,-6.32163,-10 0/0:54.0154:12:12:456:0:0:0,-3.61236,-10 0/0:99:31:31:1123:0:0:0,-9.33193,-10 0/0:69.0669:17:17:628:0:0:0,-5.11751,-10 0/0:99:38:38:1383:0:0:0,-10,-10 0/0:60.036:14:14:524:0:0:0,-4.21442,-10 0/0:32.9433:5:5:186:0:0:0,-1.50515,-10 0/0:99:27:27:990:0:0:0,-8.12781,-10 0/0:41.9742:9:8:293:0:0:0,-2.40824,-10 0/0:72.0772:18:18:661:0:0:0,-5.41854,-10 0/0:35.9536:6:6:225:0:0:0,-1.80618,-10 0/0:47.9948:10:10:350:0:0:0,-3.0103,-10 0/0:44.9845:9:9:342:0:0:0,-2.70927,-10 0/0:90.139:24:24:904:0:0:0,-7.22472,-10 0/0:75.0875:19:19:684:0:0:0,-5.71957,-10 0/0:99:41:41:1522:0:0:0,-10,-10 0/0:47.9948:10:10:374:0:0:0,-3.0103,-10 0/0:41.9742:8:8:282:0:0:0,-2.40824,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:38.3763:15:14:532:1:16:0,-1.73936,-10 0/0:41.9742:8:8:292:0:0:0,-2.40824,-10 0/0:99:35:35:1279:0:0:0,-10,-10 0/0:47.9948:10:10:380:0:0:0,-3.0103,-10 0/0:72.0772:18:18:639:0:0:0,-5.41854,-10 0/0:99:30:30:1126:0:0:0,-9.0309,-10 0/0:90.139:24:24:898:0:0:0,-7.22472,-10 0/0:47.9948:10:10:377:0:0:0,-3.0103,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:60.036:14:14:526:0:0:0,-4.21442,-10 0/0:63.0463:15:15:545:0:0:0,-4.51545,-10 0/0:60.036:14:14:532:0:0:0,-4.21442,-10 0/0:38.9639:7:7:259:0:0:0,-2.10721,-10 0/0:32.9433:5:5:165:0:0:0,-1.50515,-10 0/0:99:35:35:1273:0:0:0,-10,-10 0/0:81.1081:21:21:769:0:0:0,-6.32163,-10 0/0:66.0566:16:16:591:0:0:0,-4.81648,-10 0/0:84.1184:23:22:775:0:0:0,-6.62266,-10 0/0:81.1081:21:21:752:0:0:0,-6.32163,-10 0/0:54.0154:12:12:409:0:0:0,-3.61236,-10 0/0:66.0566:16:16:592:0:0:0,-4.81648,-10 0/0:54.0154:12:12:398:0:0:0,-3.61236,-10 0/0:29.933:4:4:152:0:0:0,-1.20412,-10 0/0:63.0463:15:15:564:0:0:0,-4.51545,-10 0/0:90.139:24:24:854:0:0:0,-7.22472,-10 0/0:63.0463:15:15:531:0:0:0,-4.51545,-10 scaffold_386 15595 . T G 409.303 . AB=0.5;ABP=3.0103;AC=2;AF=0.0108696;AN=184;AO=18;CIGAR=1X;DP=1667;DPB=1667;DPRA=1.33918;EPP=3.49285;EPPR=4.53349;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9806;NS=92;NUMALT=1;ODDS=8.7939;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=638;QR=59903;RO=1648;RPP=42.0968;RPPR=3581.6;RUN=1;SAF=8;SAP=3.49285;SAR=10;SRF=807;SRP=4.53349;SRR=841;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:71.3063:13:13:480:0:0:0,-3.91339,-10 0/0:38.193:2:2:71:0:0:0,-0.60206,-6.745 0/0:99:32:32:1161:0:0:0,-9.63296,-10 0/0:65.2857:11:11:377:0:0:0,-3.31133,-10 0/0:77.3269:15:15:570:0:0:0,-4.51545,-10 0/0:56.2548:8:8:281:0:0:0,-2.40824,-10 0/0:99:50:50:1808:0:0:0,-10,-10 0/0:77.3269:15:15:548:0:0:0,-4.51545,-10 0/0:74.3166:14:14:517:0:0:0,-4.21442,-10 0/0:53.2445:7:7:242:0:0:0,-2.10721,-10 0/0:59.2651:9:9:327:0:0:0,-2.70927,-10 0/0:53.2445:7:7:262:0:0:0,-2.10721,-10 0/0:99:37:37:1368:0:0:0,-10,-10 0/0:99:34:34:1244:0:0:0,-10,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:92.3768:20:20:741:0:0:0,-6.0206,-10 0/0:89.3682:19:19:702:0:0:0,-5.71957,-10 0/0:53.2445:7:7:265:0:0:0,-2.10721,-10 0/0:92.3768:20:20:748:0:0:0,-6.0206,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:89.3682:19:19:654:0:0:0,-5.71957,-10 0/0:89.3682:19:19:693:0:0:0,-5.71957,-10 0/0:56.2548:8:8:276:0:0:0,-2.40824,-10 0/0:77.3269:15:15:537:0:0:0,-4.51545,-10 0/0:86.3579:18:18:666:0:0:0,-5.41854,-10 0/0:99:32:32:1199:0:0:0,-9.63296,-10 0/0:74.3166:14:14:491:0:0:0,-4.21442,-10 0/0:74.3166:14:14:521:0:0:0,-4.21442,-10 0/0:74.3166:14:14:519:0:0:0,-4.21442,-10 0/0:99:27:27:998:0:0:0,-8.12781,-10 0/0:41.2033:3:3:113:0:0:0,-0.90309,-10 0/0:56.2548:8:8:283:0:0:0,-2.40824,-10 0/0:92.3768:20:20:731:0:0:0,-6.0206,-10 0/0:65.2857:11:11:370:0:0:0,-3.31133,-10 0/0:89.3682:19:19:701:0:0:0,-5.71957,-10 0/0:47.2239:5:5:179:0:0:0,-1.50515,-10 0/0:59.2651:9:9:342:0:0:0,-2.70927,-10 0/0:99:32:32:1195:0:0:0,-9.63296,-10 0/0:99:23:23:855:0:0:0,-6.92369,-10 0/0:56.2548:8:8:249:0:0:0,-2.40824,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:71.3063:13:13:475:0:0:0,-3.91339,-10 0/0:86.3579:18:18:645:0:0:0,-5.41854,-10 0/0:99:35:35:1229:0:0:0,-10,-10 0/0:92.3768:20:20:750:0:0:0,-6.0206,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:99:37:37:1331:0:0:0,-10,-10 0/0:95.389:21:21:783:0:0:0,-6.32163,-10 0/0:68.296:12:12:456:0:0:0,-3.61236,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:83.3473:17:17:589:0:0:0,-5.11751,-10 0/0:99:38:37:1338:1:14:0,-8.45936,-10 0/0:74.3166:14:14:525:0:0:0,-4.21442,-10 0/0:47.2239:5:5:190:0:0:0,-1.50515,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:59.2651:9:9:333:0:0:0,-2.70927,-10 0/0:86.3579:18:18:677:0:0:0,-5.41854,-10 0/0:50.2342:6:6:199:0:0:0,-1.80618,-10 0/0:62.2754:10:10:363:0:0:0,-3.0103,-10 0/0:59.2651:9:9:336:0:0:0,-2.70927,-10 0/1:99:24:11:397:13:483:-10,0,-10 0/0:89.3682:19:19:677:0:0:0,-5.71957,-10 0/0:99:41:41:1525:0:0:0,-10,-10 0/1:87.4269:10:6:228:4:141:-10,0,-10 0/0:56.2548:8:8:295:0:0:0,-2.40824,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:77.3269:15:15:548:0:0:0,-4.51545,-10 0/0:56.2548:8:8:298:0:0:0,-2.40824,-10 0/0:99:34:34:1168:0:0:0,-10,-10 0/0:62.2754:10:10:374:0:0:0,-3.0103,-10 0/0:86.3579:18:18:638:0:0:0,-5.41854,-10 0/0:99:30:30:1123:0:0:0,-9.0309,-10 0/0:99:24:24:897:0:0:0,-7.22472,-10 0/0:62.2754:10:10:334:0:0:0,-3.0103,-10 0/0:99:32:32:1148:0:0:0,-9.63296,-10 0/0:74.3166:14:14:480:0:0:0,-4.21442,-10 0/0:74.3166:14:14:515:0:0:0,-4.21442,-10 0/0:74.3166:14:14:532:0:0:0,-4.21442,-10 0/0:53.2445:7:7:217:0:0:0,-2.10721,-10 0/0:47.2239:5:5:163:0:0:0,-1.50515,-10 0/0:99:35:35:1253:0:0:0,-10,-10 0/0:92.3768:21:20:718:0:0:0,-6.0206,-10 0/0:80.3372:16:16:606:0:0:0,-4.81648,-10 0/0:99:23:23:854:0:0:0,-6.92369,-10 0/0:92.3768:20:20:721:0:0:0,-6.0206,-10 0/0:68.296:12:12:374:0:0:0,-3.61236,-10 0/0:80.3372:16:16:580:0:0:0,-4.81648,-10 0/0:68.296:12:12:404:0:0:0,-3.61236,-10 0/0:44.2136:4:4:152:0:0:0,-1.20412,-10 0/0:77.3269:15:15:554:0:0:0,-4.51545,-10 0/0:99:24:24:860:0:0:0,-7.22472,-10 0/0:77.3269:15:15:534:0:0:0,-4.51545,-10 scaffold_386 36505 . T C 51963.9 . AB=0.6;ABP=6.05036;AC=182;AF=0.98913;AN=184;AO=1721;CIGAR=1X;DP=1754;DPB=1754;DPRA=0;EPP=4.73764;EPPR=3.28173;GTI=1;LEN=1;MEANALT=1.01099;MQM=59.5654;MQMR=60;NS=92;NUMALT=1;ODDS=0.857597;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=63343;QR=1120;RO=32;RPP=3740.11;RPPR=72.4974;RUN=1;SAF=879;SAP=4.73764;SAR=842;SRF=15;SRP=3.28173;SRR=17;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:60.6255:17:0:0:17:640:-10,-5.11751,0 1/1:30.5225:7:0:0:7:261:-10,-2.10721,0 1/1:48.5843:13:0:0:13:482:-10,-3.91339,0 1/1:36.5431:9:0:0:9:296:-10,-2.70927,0 1/1:48.5843:13:0:0:13:483:-10,-3.91339,0 1/1:51.5946:14:0:0:14:520:-10,-4.21442,0 1/1:96.75:29:0:0:29:1083:-10,-8.72987,0 1/1:81.6975:24:0:0:24:857:-10,-7.22472,0 1/1:42.5637:11:0:0:11:415:-10,-3.31133,0 1/1:15.471:2:0:0:2:73:-6.935,-0.60206,0 1/1:27.5122:6:0:0:6:226:-10,-1.80618,0 1/1:27.5122:6:0:0:6:222:-10,-1.80618,0 1/1:81.6975:24:0:0:24:894:-10,-7.22472,0 1/1:99:36:0:0:36:1342:-10,-10,0 1/1:78.6872:23:0:0:23:851:-10,-6.92369,0 1/1:78.6872:23:0:0:23:859:-10,-6.92369,0 1/1:69.6564:20:0:0:20:756:-10,-6.0206,0 1/1:36.5431:9:0:0:9:341:-10,-2.70927,0 1/1:60.6255:17:0:0:17:637:-10,-5.11751,0 1/1:99:39:0:0:39:1419:-10,-10,0 1/1:54.6049:15:0:0:15:559:-10,-4.51545,0 1/1:99:32:0:0:32:1179:-10,-9.63296,0 1/1:39.5534:10:0:0:10:373:-10,-3.0103,0 1/1:60.6255:17:0:0:17:627:-10,-5.11751,0 1/1:63.6358:18:0:0:18:666:-10,-5.41854,0 1/1:99:33:0:0:33:1226:-10,-9.93399,0 1/1:57.6152:16:0:0:16:607:-10,-4.81648,0 1/1:42.5637:11:0:0:11:415:-10,-3.31133,0 1/1:96.75:29:0:0:29:1060:-10,-8.72987,0 1/1:99:37:0:0:37:1355:-10,-10,0 1/1:24.5019:5:0:0:5:186:-10,-1.50515,0 1/1:27.5122:6:0:0:6:228:-10,-1.80618,0 1/1:57.6152:16:0:0:16:603:-10,-4.81648,0 1/1:33.5328:8:0:0:8:297:-10,-2.40824,0 1/1:39.5534:10:0:0:10:338:-10,-3.0103,0 1/1:33.5328:8:0:0:8:286:-10,-2.40824,0 1/1:48.5843:13:0:0:13:466:-10,-3.91339,0 1/1:87.7183:26:0:0:26:985:-10,-7.82678,0 1/1:84.7076:25:0:0:25:907:-10,-7.52575,0 1/1:51.5946:14:0:0:14:530:-10,-4.21442,0 1/1:96.75:29:0:0:29:1060:-10,-8.72987,0 1/1:84.7076:25:0:0:25:937:-10,-7.52575,0 1/1:72.6667:21:0:0:21:757:-10,-6.32163,0 1/1:99:42:0:0:42:1481:-10,-10,0 1/1:72.6667:21:0:0:21:764:-10,-6.32163,0 1/1:39.5534:10:0:0:10:375:-10,-3.0103,0 1/1:99:47:0:0:47:1709:-10,-10,0 1/1:75.6769:22:0:0:22:805:-10,-6.62266,0 1/1:45.574:12:0:0:12:453:-10,-3.61236,0 1/1:99:37:0:0:37:1345:-10,-10,0 1/1:57.6152:16:0:0:16:603:-10,-4.81648,0 1/1:87.7183:26:0:0:26:973:-10,-7.82678,0 1/1:48.5843:13:0:0:13:431:-10,-3.91339,0 1/1:24.5019:5:0:0:5:187:-10,-1.50515,0 1/1:99:40:0:0:39:1447:-10,-10,0 1/1:39.5534:10:0:0:10:367:-10,-3.0103,0 1/1:93.7369:28:0:0:28:1032:-10,-8.42884,0 1/1:36.5431:9:0:0:9:339:-10,-2.70927,0 1/1:75.6769:22:0:0:22:822:-10,-6.62266,0 1/1:27.5122:6:0:0:6:215:-10,-1.80618,0 1/1:99:30:0:0:30:1057:-10,-9.0309,0 1/1:60.6255:17:0:0:17:627:-10,-5.11751,0 1/1:99:33:0:0:33:1228:-10,-9.93399,0 1/1:42.5637:11:0:0:11:405:-10,-3.31133,0 1/1:51.5946:14:0:0:14:530:-10,-4.21442,0 1/1:90.7287:27:0:0:27:982:-10,-8.12781,0 1/1:66.6461:19:0:0:19:709:-10,-5.71957,0 1/1:60.6255:17:0:0:17:610:-10,-5.11751,0 1/1:99:45:0:0:45:1678:-10,-10,0 1/1:51.5946:14:0:0:14:524:-10,-4.21442,0 1/1:72.6667:21:0:0:21:784:-10,-6.32163,0 1/1:99:33:0:0:33:1224:-10,-9.93399,0 1/1:57.6152:16:0:0:16:567:-10,-4.81648,0 0/1:1.37247:18:18:606:0:0:0,-5.41854,-10 0/1:99:35:14:514:21:751:-10,0,-10 1/1:42.5637:11:0:0:11:384:-10,-3.31133,0 1/1:27.5122:6:0:0:6:219:-10,-1.80618,0 1/1:63.6358:18:0:0:18:651:-10,-5.41854,0 1/1:39.5534:10:0:0:10:358:-10,-3.0103,0 1/1:51.5946:14:0:0:14:513:-10,-4.21442,0 1/1:84.7076:25:0:0:25:921:-10,-7.52575,0 1/1:66.6461:19:0:0:19:692:-10,-5.71957,0 1/1:96.75:29:0:0:29:1088:-10,-8.72987,0 1/1:81.6975:24:0:0:24:898:-10,-7.22472,0 1/1:99:33:0:0:33:1235:-10,-9.93399,0 1/1:15.471:2:0:0:2:76:-7.22,-0.60206,0 1/1:57.6152:16:0:0:16:566:-10,-4.81648,0 1/1:51.5946:14:0:0:14:528:-10,-4.21442,0 1/1:18.4813:3:0:0:3:114:-10,-0.90309,0 1/1:48.5843:13:0:0:13:485:-10,-3.91339,0 1/1:60.6255:17:0:0:17:631:-10,-5.11751,0 1/1:63.6358:18:0:0:18:656:-10,-5.41854,0 scaffold_386 194240 . C T 1097.26 . AB=0.671875;ABP=19.4321;AC=3;AF=0.016129;AN=186;AO=46;CIGAR=1X;DP=2330;DPB=2330;DPRA=1.03333;EPP=3.0103;EPPR=7.28001;GTI=2;LEN=1;MEANALT=1;MQM=58.6957;MQMR=59.9523;NS=93;NUMALT=1;ODDS=5.66404;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1607;QR=83485;RO=2283;RPP=102.898;RPPR=4960.48;RUN=1;SAF=23;SAP=3.0103;SAR=23;SRF=1175;SRP=7.28001;SRR=1108;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:66.7696:15:15:534:0:0:0,-4.51545,-10 0/0:99:34:34:1250:0:0:0,-10,-10 0/0:72.7902:17:17:600:0:0:0,-5.11751,-10 0/0:45.6975:8:8:302:0:0:0,-2.40824,-10 0/0:69.7799:16:16:590:0:0:0,-4.81648,-10 0/0:99:46:46:1622:0:0:0,-10,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:81.821:20:20:753:0:0:0,-6.0206,-10 0/1:0.000137355:7:0:0:7:266:-10,-2.10721,0 0/1:6.86769e-05:6:0:0:6:228:-10,-1.80618,0 0/0:48.7078:9:9:327:0:0:0,-2.70927,-10 0/0:99:49:49:1796:0:0:0,-10,-10 0/1:99:51:21:749:30:1048:-10,0,-10 0/0:96.873:25:25:946:0:0:0,-7.52575,-10 0/0:99:40:40:1458:0:0:0,-10,-10 0/0:99:37:37:1244:0:0:0,-10,-10 0/0:69.7799:16:16:599:0:0:0,-4.81648,-10 0/0:78.8109:19:19:717:0:0:0,-5.71957,-10 0/0:99:67:67:2431:0:0:0,-10,-10 0/0:72.7902:17:17:643:0:0:0,-5.11751,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:42.6872:7:7:259:0:0:0,-2.10721,-10 0/0:75.8005:18:18:649:0:0:0,-5.41854,-10 0/0:99:29:29:1082:0:0:0,-8.72987,-10 0/0:99:34:34:1271:0:0:0,-10,-10 0/0:81.821:20:20:749:0:0:0,-6.0206,-10 0/0:81.821:20:20:751:0:0:0,-6.0206,-10 0/0:99:29:29:1015:0:0:0,-8.72987,-10 0/0:99:37:37:1392:0:0:0,-10,-10 0/0:30.646:3:3:114:0:0:0,-0.90309,-10 0/0:66.7696:15:15:492:0:0:0,-4.51545,-10 0/0:72.7902:17:17:645:0:0:0,-5.11751,-10 0/0:48.7078:9:9:327:0:0:0,-2.70927,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:48.7078:9:9:342:0:0:0,-2.70927,-10 0/0:66.7696:15:15:561:0:0:0,-4.51545,-10 0/0:99:43:43:1594:0:0:0,-10,-10 0/0:66.7696:15:15:542:0:0:0,-4.51545,-10 0/0:87.8412:22:22:818:0:0:0,-6.62266,-10 0/0:99:56:56:2016:0:0:0,-10,-10 0/0:96.873:25:25:911:0:0:0,-7.52575,-10 0/0:78.8109:19:19:666:0:0:0,-5.71957,-10 0/0:99:51:51:1889:0:0:0,-10,-10 0/0:99:26:26:972:0:0:0,-7.82678,-10 0/0:84.8312:21:21:756:0:0:0,-6.32163,-10 0/0:99:47:47:1727:0:0:0,-10,-10 0/0:99:31:31:1158:0:0:0,-9.33193,-10 0/0:60.749:13:13:494:0:0:0,-3.91339,-10 0/0:99:51:51:1866:0:0:0,-10,-10 0/0:69.7799:16:16:604:0:0:0,-4.81648,-10 0/0:99:39:39:1390:0:0:0,-10,-10 0/0:57.7387:12:12:448:0:0:0,-3.61236,-10 0/0:36.6666:5:5:190:0:0:0,-1.50515,-10 0/0:99:50:49:1799:1:16:0,-10,-10 0/0:72.7902:17:17:624:0:0:0,-5.11751,-10 0/0:84.8312:21:21:766:0:0:0,-6.32163,-10 0/0:51.7181:10:10:367:0:0:0,-3.0103,-10 0/0:81.821:20:20:745:0:0:0,-6.0206,-10 0/0:60.749:13:13:476:0:0:0,-3.91339,-10 0/0:99:51:51:1825:0:0:0,-10,-10 0/0:90.8509:23:23:815:0:0:0,-6.92369,-10 0/0:99:60:60:2136:0:0:0,-10,-10 0/0:99:39:39:1388:0:0:0,-10,-10 0/0:33.3983:12:11:410:1:16:0,-0.933179,-10 0/0:99:42:42:1558:0:0:0,-10,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:45.6975:8:8:296:0:0:0,-2.40824,-10 0/0:99:40:40:1439:0:0:0,-10,-10 0/0:57.7387:12:12:436:0:0:0,-3.61236,-10 0/0:99:31:31:1124:0:0:0,-9.33193,-10 0/0:99:52:52:1923:0:0:0,-10,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:78.8109:19:19:671:0:0:0,-5.71957,-10 0/0:99:42:42:1511:0:0:0,-10,-10 0/0:66.7696:15:15:565:0:0:0,-4.51545,-10 0/0:72.7902:17:17:646:0:0:0,-5.11751,-10 0/0:75.8005:18:18:665:0:0:0,-5.41854,-10 0/0:39.6769:6:6:225:0:0:0,-1.80618,-10 0/0:72.7902:17:17:640:0:0:0,-5.11751,-10 0/0:99:43:42:1558:0:0:0,-10,-10 0/0:99:34:34:1243:0:0:0,-10,-10 0/0:99:28:28:1023:0:0:0,-8.42884,-10 0/0:93.8601:24:24:865:0:0:0,-7.22472,-10 0/0:64.1274:29:28:1044:1:33:0,-3.96747,-10 0/0:33.6563:4:4:141:0:0:0,-1.20412,-10 0/0:72.7902:17:17:614:0:0:0,-5.11751,-10 0/0:69.7799:16:16:602:0:0:0,-4.81648,-10 0/0:33.6563:4:4:150:0:0:0,-1.20412,-10 0/0:90.8509:23:23:849:0:0:0,-6.92369,-10 0/0:99:26:26:941:0:0:0,-7.82678,-10 0/0:69.7799:16:16:598:0:0:0,-4.81648,-10 scaffold_400 200863 . A G 29167.8 . AB=0.534091;ABP=8.34028;AC=86;AF=0.467391;AN=184;AO=996;CIGAR=1X;DP=2112;DPB=2112;DPRA=1.19704;EPP=6.1585;EPPR=4.13307;GTI=1;LEN=1;MEANALT=1.01923;MQM=59.6536;MQMR=59.982;NS=92;NUMALT=1;ODDS=0.0968608;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=36654;QR=41019;RO=1114;RPP=2096.87;RPPR=2335.95;RUN=1;SAF=511;SAP=4.48411;SAR=485;SRF=537;SRP=6.12911;SRR=577;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:30.4924:12:0:0:12:455:-10,-3.61236,0 1/1:27.4821:11:0:0:11:408:-10,-3.31133,0 1/1:81.6675:29:0:0:29:1017:-10,-8.72987,0 1/1:27.4821:11:0:0:11:414:-10,-3.31133,0 0/1:99:13:9:332:4:130:-10,0,-10 0/0:37.1624:14:14:525:0:0:0,-4.21442,-10 1/1:99:45:0:0:45:1665:-10,-10,0 1/1:72.6366:26:0:0:26:946:-10,-7.82678,0 0/0:34.1521:13:13:474:0:0:0,-3.91339,-10 0/0:13.08:6:6:197:0:0:0,-1.80618,-10 0/0:25.1212:10:10:332:0:0:0,-3.0103,-10 1/1:12.4306:6:0:0:6:228:-10,-1.80618,0 0/1:99:40:17:636:23:858:-10,0,-10 0/1:99:51:24:888:26:950:-10,0,-10 0/1:99:27:13:491:14:514:-10,0,-10 0/1:99:25:15:539:10:367:-10,0,-10 0/1:99:40:19:701:21:794:-10,0,-10 0/0:43.183:16:16:585:0:0:0,-4.81648,-10 0/0:55.2242:20:20:751:0:0:0,-6.0206,-10 0/1:99:48:23:849:25:893:-10,0,-10 0/1:99:24:9:339:15:566:-10,0,-10 0/1:99:28:10:374:18:657:-10,0,-10 0/0:16.0903:7:7:242:0:0:0,-2.10721,-10 1/1:54.5748:20:0:0:20:734:-10,-6.0206,0 0/0:58.2345:21:21:760:0:0:0,-6.32163,-10 0/0:70.2757:25:25:921:0:0:0,-7.52575,-10 0/0:64.2551:23:23:842:0:0:0,-6.92369,-10 0/0:34.1521:13:13:494:0:0:0,-3.91339,-10 0/0:79.3065:28:28:1008:0:0:0,-8.42884,-10 0/0:99:44:44:1600:0:0:0,-10,-10 0/0:16.0903:7:7:266:0:0:0,-2.10721,-10 0/1:1.05688:4:4:151:0:0:0,-1.20412,-10 0/0:49.2036:18:18:627:0:0:0,-5.41854,-10 1/1:36.513:14:0:0:14:511:-10,-4.21442,0 1/1:54.5748:20:0:0:20:710:-10,-6.0206,0 0/0:25.1212:10:10:371:0:0:0,-3.0103,-10 0/0:37.1624:14:14:518:0:0:0,-4.21442,-10 0/1:99:31:11:418:20:753:-10,0,-10 0/0:49.2036:18:18:677:0:0:0,-5.41854,-10 0/1:99:19:10:351:9:330:-10,0,-10 0/0:97.3638:34:34:1271:0:0:0,-10,-10 0/0:46.1933:17:17:634:0:0:0,-5.11751,-10 0/0:40.1727:15:15:567:0:0:0,-4.51545,-10 0/1:99:48:20:732:28:1009:-10,0,-10 0/0:94.3558:33:33:1217:0:0:0,-9.93399,-10 0/0:34.1521:13:13:458:0:0:0,-3.91339,-10 0/0:99:50:50:1817:0:0:0,-10,-10 0/0:79.3065:28:28:1055:0:0:0,-8.42884,-10 0/0:34.1521:13:13:451:0:0:0,-3.91339,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:55.2242:20:20:744:0:0:0,-6.0206,-10 0/0:99:49:49:1837:0:0:0,-10,-10 0/0:28.1315:11:11:388:0:0:0,-3.31133,-10 0/0:28.1315:11:11:415:0:0:0,-3.31133,-10 0/0:99:55:54:2014:1:38:0,-10,-10 0/0:79.3065:28:28:1056:0:0:0,-8.42884,-10 0/1:99:23:9:332:14:509:-10,0,-10 1/1:21.4615:9:0:0:9:318:-10,-2.70927,0 1/1:51.5645:19:0:0:19:707:-10,-5.71957,0 1/1:51.5645:19:0:0:19:695:-10,-5.71957,0 1/1:90.6986:32:0:0:32:1189:-10,-9.63296,0 1/1:75.6469:27:0:0:27:983:-10,-8.12781,0 1/1:99:53:0:0:53:1992:-10,-10,0 1/1:57.5851:21:0:0:21:778:-10,-6.32163,0 1/1:39.5233:15:0:0:15:541:-10,-4.51545,0 0/1:99:41:22:811:19:690:-10,0,-10 1/1:57.5851:21:0:0:21:797:-10,-6.32163,0 1/1:30.4924:12:0:0:12:430:-10,-3.61236,0 0/1:99:31:15:537:16:580:-10,0,-10 0/0:25.1212:10:10:379:0:0:0,-3.0103,-10 1/1:66.616:24:0:0:24:876:-10,-7.22472,0 0/0:99:38:38:1410:0:0:0,-10,-10 0/1:99:34:16:597:18:676:-10,0,-10 1/1:57.5851:21:0:0:21:790:-10,-6.32163,0 1/1:60.5954:22:0:0:22:819:-10,-6.62266,0 0/0:46.1933:17:17:609:0:0:0,-5.11751,-10 1/1:48.5542:18:0:0:18:637:-10,-5.41854,0 1/1:21.4615:9:0:0:9:325:-10,-2.70927,0 1/1:18.4512:8:0:0:8:295:-10,-2.40824,0 1/1:6.41002:4:0:0:4:152:-10,-1.20412,0 1/1:99:38:0:0:38:1414:-10,-10,0 1/1:99:45:0:0:45:1676:-10,-10,0 1/1:78.6572:28:0:0:28:1057:-10,-8.42884,0 1/1:60.5954:22:0:0:22:811:-10,-6.62266,0 0/0:70.2757:26:25:934:0:0:0,-7.52575,-10 0/0:10.0697:5:5:172:0:0:0,-1.50515,-10 0/0:67.2654:24:24:881:0:0:0,-7.22472,-10 0/0:76.2963:27:27:1008:0:0:0,-8.12781,-10 0/1:80.2701:5:3:114:2:76:-6.71485,0,-10 1/1:63.6057:23:0:0:23:833:-10,-6.92369,0 1/1:30.4924:12:0:0:12:442:-10,-3.61236,0 1/1:45.5439:17:0:0:17:619:-10,-5.11751,0 scaffold_400 306764 . C G 2909.98 . AB=0.569343;ABP=8.73221;AC=11;AF=0.0597826;AN=184;AO=115;CIGAR=1X;DP=1599;DPB=1599;DPRA=1.1256;EPP=9.82684;EPPR=3.18771;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9514;NS=92;NUMALT=1;ODDS=2.02706;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4058;QR=54484;RO=1481;RPP=252.73;RPPR=3210.28;RUN=1;SAF=67;SAP=9.82684;SAR=48;SRF=736;SRP=3.12906;SRR=745;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:44.4516:12:12:448:0:0:0,-3.61236,-10 0/0:47.4619:13:13:493:0:0:0,-3.91339,-10 0/0:62.5134:18:18:668:0:0:0,-5.41854,-10 0/0:35.4207:9:9:342:0:0:0,-2.70927,-10 0/0:38.431:10:10:380:0:0:0,-3.0103,-10 0/0:23.3795:5:5:186:0:0:0,-1.50515,-10 0/0:99:38:38:1387:0:0:0,-10,-10 0/0:80.5751:24:24:909:0:0:0,-7.22472,-10 1/1:25.8804:16:0:0:16:555:-10,-4.81648,0 0/0:17.3589:3:3:114:0:0:0,-0.90309,-10 0/0:32.4104:8:8:304:0:0:0,-2.40824,-10 0/0:20.3692:4:4:110:0:0:0,-1.20412,-10 0/0:99:33:33:1179:0:0:0,-9.93399,-10 0/0:74.5546:22:22:813:0:0:0,-6.62266,-10 0/1:99:28:12:412:16:570:-10,0,-10 0/0:74.5546:22:22:818:0:0:0,-6.62266,-10 0/0:89.6054:27:27:991:0:0:0,-8.12781,-10 0/0:35.4207:9:9:338:0:0:0,-2.70927,-10 0/0:56.4928:16:16:580:0:0:0,-4.81648,-10 0/0:99:36:36:1334:0:0:0,-10,-10 0/0:38.431:11:10:378:0:0:0,-3.0103,-10 0/0:71.5443:21:21:796:0:0:0,-6.32163,-10 0/0:38.431:10:10:380:0:0:0,-3.0103,-10 0/0:29.4001:7:7:266:0:0:0,-2.10721,-10 0/0:65.5237:19:19:699:0:0:0,-5.71957,-10 0/0:80.5751:24:24:891:0:0:0,-7.22472,-10 0/0:89.6054:27:27:1017:0:0:0,-8.12781,-10 0/0:44.4516:12:12:455:0:0:0,-3.61236,-10 0/0:50.4722:14:14:529:0:0:0,-4.21442,-10 0/0:74.5546:23:22:833:0:0:0,-6.62266,-10 0/0:35.4207:9:9:326:0:0:0,-2.70927,-10 0/0:35.4207:9:9:313:0:0:0,-2.70927,-10 0/0:68.534:20:20:715:0:0:0,-6.0206,-10 0/0:41.4413:11:11:415:0:0:0,-3.31133,-10 0/0:83.5853:25:25:934:0:0:0,-7.52575,-10 0/0:20.3692:4:4:152:0:0:0,-1.20412,-10 0/0:47.4619:13:13:482:0:0:0,-3.91339,-10 0/0:98.6382:30:30:1082:0:0:0,-9.0309,-10 0/0:65.5237:19:19:695:0:0:0,-5.71957,-10 0/0:50.4722:14:14:515:0:0:0,-4.21442,-10 0/0:80.5751:24:24:863:0:0:0,-7.22472,-10 0/0:44.2952:20:19:696:1:16:0,-3.11957,-10 0/0:29.4001:7:7:264:0:0:0,-2.10721,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:74.5546:22:22:836:0:0:0,-6.62266,-10 0/0:53.4825:15:15:518:0:0:0,-4.51545,-10 0/0:99:40:40:1482:0:0:0,-10,-10 0/0:86.5955:26:26:961:0:0:0,-7.82678,-10 0/0:50.4722:14:14:529:0:0:0,-4.21442,-10 0/0:89.6054:27:27:1000:0:0:0,-8.12781,-10 0/0:56.4928:16:16:559:0:0:0,-4.81648,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:35.4207:9:9:318:0:0:0,-2.70927,-10 0/0:17.3589:3:3:114:0:0:0,-0.90309,-10 0/0:89.6054:27:27:975:0:0:0,-8.12781,-10 0/0:65.5237:19:19:705:0:0:0,-5.71957,-10 0/0:53.4825:15:15:564:0:0:0,-4.51545,-10 0/0:47.4619:13:13:474:0:0:0,-3.91339,-10 0/0:56.4928:16:16:606:0:0:0,-4.81648,-10 0/0:38.431:10:10:367:0:0:0,-3.0103,-10 0/0:99:36:35:1293:0:0:0,-10,-10 0/0:50.4722:14:14:521:0:0:0,-4.21442,-10 0/0:89.6054:27:27:969:0:0:0,-8.12781,-10 0/0:74.5546:22:22:820:0:0:0,-6.62266,-10 0/0:29.4001:7:7:240:0:0:0,-2.10721,-10 0/1:99:26:13:465:13:448:-10,0,-10 0/0:62.5134:18:18:667:0:0:0,-5.41854,-10 0/0:29.4001:7:7:262:0:0:0,-2.10721,-10 0/0:74.5546:22:22:824:0:0:0,-6.62266,-10 0/0:23.3795:5:5:185:0:0:0,-1.50515,-10 0/0:74.5546:22:22:835:0:0:0,-6.62266,-10 0/0:74.5546:22:22:830:0:0:0,-6.62266,-10 0/0:41.4413:11:11:405:0:0:0,-3.31133,-10 0/0:53.4825:15:15:524:0:0:0,-4.51545,-10 0/0:62.5134:18:18:655:0:0:0,-5.41854,-10 0/0:35.4207:9:9:341:0:0:0,-2.70927,-10 0/0:44.4516:12:12:413:0:0:0,-3.61236,-10 0/1:0.491436:8:0:0:8:295:-10,-2.40824,0 0/0:29.4001:7:7:238:0:0:0,-2.10721,-10 0/0:23.3795:5:5:188:0:0:0,-1.50515,-10 0/0:89.6054:27:27:958:0:0:0,-8.12781,-10 0/0:71.5443:21:21:770:0:0:0,-6.32163,-10 0/1:99:26:14:524:12:454:-10,0,-10 0/0:44.4516:12:12:425:0:0:0,-3.61236,-10 0/0:65.5237:19:19:680:0:0:0,-5.71957,-10 0/0:47.4619:13:13:456:0:0:0,-3.91339,-10 0/0:77.5649:23:23:863:0:0:0,-6.92369,-10 0/0:41.4413:11:11:403:0:0:0,-3.31133,-10 0/1:99:8:3:110:5:188:-10,0,-9.60661 0/1:99:21:7:266:14:485:-10,0,-10 0/1:99:20:10:358:10:364:-10,0,-10 1/1:37.9216:20:0:0:20:683:-10,-6.0206,0 scaffold_426 67924 . C T 869.707 . AB=0.648148;ABP=13.3047;AC=2;AF=0.0108696;AN=184;AO=38;CIGAR=1X;DP=1801;DPB=1801;DPRA=1.45523;EPP=3.9246;EPPR=3.02139;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9728;NS=92;NUMALT=1;ODDS=0.565755;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1347;QR=64354;RO=1763;RPP=85.5263;RPPR=3831.32;RUN=1;SAF=17;SAP=3.9246;SAR=21;SRF=883;SRP=3.02139;SRR=880;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.0068:11:11:376:0:0:0,-3.31133,-10 0/0:33.9862:9:9:340:0:0:0,-2.70927,-10 0/0:82.1509:25:25:931:0:0:0,-7.52575,-10 0/0:49.0377:14:14:523:0:0:0,-4.21442,-10 0/0:46.0274:13:13:443:0:0:0,-3.91339,-10 0/0:52.048:15:15:553:0:0:0,-4.51545,-10 0/0:99:31:31:1166:0:0:0,-9.33193,-10 0/0:88.1713:27:27:1004:0:0:0,-8.12781,-10 0/1:1.21532:17:0:0:17:616:-10,-5.11751,0 0/0:12.9141:2:2:76:0:0:0,-0.60206,-7.22 0/0:27.9656:7:7:233:0:0:0,-2.10721,-10 0/0:27.9656:7:7:259:0:0:0,-2.10721,-10 0/1:99:37:19:714:18:661:-10,0,-10 0/0:99:38:38:1347:0:0:0,-10,-10 0/0:82.1509:25:25:939:0:0:0,-7.52575,-10 0/0:70.1098:21:21:762:0:0:0,-6.32163,-10 0/0:64.0892:19:19:707:0:0:0,-5.71957,-10 0/0:43.0171:12:12:452:0:0:0,-3.61236,-10 0/0:67.0995:20:20:751:0:0:0,-6.0206,-10 0/0:88.1713:27:27:995:0:0:0,-8.12781,-10 0/0:55.0583:16:16:597:0:0:0,-4.81648,-10 0/0:91.1813:28:28:1029:0:0:0,-8.42884,-10 0/0:43.0171:12:12:448:0:0:0,-3.61236,-10 0/0:79.1407:24:24:880:0:0:0,-7.22472,-10 0/0:85.1612:26:26:949:0:0:0,-7.82678,-10 0/0:99:34:34:1212:0:0:0,-10,-10 0/0:27.9656:7:7:264:0:0:0,-2.10721,-10 0/0:67.0995:20:20:750:0:0:0,-6.0206,-10 0/0:67.0995:20:20:705:0:0:0,-6.0206,-10 0/0:99:33:33:1196:0:0:0,-9.93399,-10 0/0:30.9759:8:8:260:0:0:0,-2.40824,-10 0/0:15.9244:3:3:109:0:0:0,-0.90309,-10 0/0:49.0377:14:14:486:0:0:0,-4.21442,-10 0/0:58.0686:17:17:613:0:0:0,-5.11751,-10 0/0:73.1201:22:22:816:0:0:0,-6.62266,-10 0/0:15.9244:3:3:114:0:0:0,-0.90309,-10 0/0:24.9553:6:6:195:0:0:0,-1.80618,-10 0/0:97.5985:40:39:1433:1:16:0,-8.83914,-10 0/0:52.048:15:15:569:0:0:0,-4.51545,-10 0/0:33.9862:9:9:316:0:0:0,-2.70927,-10 0/0:97.2:30:30:1097:0:0:0,-9.0309,-10 0/0:55.0583:16:16:580:0:0:0,-4.81648,-10 0/0:85.1612:26:26:959:0:0:0,-7.82678,-10 0/0:85.1612:26:26:951:0:0:0,-7.82678,-10 0/0:67.0995:20:20:718:0:0:0,-6.0206,-10 0/0:49.0377:14:14:481:0:0:0,-4.21442,-10 0/0:99:43:43:1560:0:0:0,-10,-10 0/0:61.0789:18:18:659:0:0:0,-5.41854,-10 0/0:76.1304:23:23:860:0:0:0,-6.92369,-10 0/0:88.1713:27:27:983:0:0:0,-8.12781,-10 0/0:64.0892:19:19:705:0:0:0,-5.71957,-10 0/0:99:32:32:1150:0:0:0,-9.63296,-10 0/0:49.0377:14:14:531:0:0:0,-4.21442,-10 0/0:33.9862:9:9:337:0:0:0,-2.70927,-10 0/0:85.1612:26:26:986:0:0:0,-7.82678,-10 0/0:64.0892:19:19:685:0:0:0,-5.71957,-10 0/0:70.1098:21:21:784:0:0:0,-6.32163,-10 0/0:49.0377:14:14:484:0:0:0,-4.21442,-10 0/0:76.1304:23:23:842:0:0:0,-6.92369,-10 0/0:52.048:15:15:534:0:0:0,-4.51545,-10 0/0:70.1098:21:21:758:0:0:0,-6.32163,-10 0/0:49.0377:14:14:499:0:0:0,-4.21442,-10 0/0:99:36:36:1326:0:0:0,-10,-10 0/0:76.1304:23:23:829:0:0:0,-6.92369,-10 0/0:36.9965:10:10:358:0:0:0,-3.0103,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:85.1612:26:26:913:0:0:0,-7.82678,-10 0/0:27.9656:7:7:244:0:0:0,-2.10721,-10 0/0:66.9089:37:36:1344:1:38:0,-5.76991,-10 0/0:52.048:15:15:560:0:0:0,-4.51545,-10 0/0:55.0583:16:16:558:0:0:0,-4.81648,-10 0/0:99:34:34:1275:0:0:0,-10,-10 0/0:55.0583:16:16:575:0:0:0,-4.81648,-10 0/0:36.9965:10:10:358:0:0:0,-3.0103,-10 0/0:85.1612:26:26:978:0:0:0,-7.82678,-10 0/0:58.0686:17:17:604:0:0:0,-5.11751,-10 0/0:52.048:15:15:552:0:0:0,-4.51545,-10 0/0:24.9553:6:6:224:0:0:0,-1.80618,-10 0/0:12.9141:2:2:76:0:0:0,-0.60206,-7.22 0/0:52.048:15:15:568:0:0:0,-4.51545,-10 0/0:99:40:40:1456:0:0:0,-10,-10 0/0:79.1407:24:24:864:0:0:0,-7.22472,-10 0/0:85.1612:26:26:930:0:0:0,-7.82678,-10 0/0:70.1098:21:21:788:0:0:0,-6.32163,-10 0/0:99:34:34:1233:0:0:0,-10,-10 0/0:27.9656:7:7:262:0:0:0,-2.10721,-10 0/0:67.0995:20:20:668:0:0:0,-6.0206,-10 0/0:0.701891:8:7:266:1:16:-0.09485,0,-10 0/0:21.945:5:5:188:0:0:0,-1.50515,-10 0/0:85.1612:26:26:924:0:0:0,-7.82678,-10 0/0:79.1407:24:24:902:0:0:0,-7.22472,-10 0/0:61.0789:18:18:663:0:0:0,-5.41854,-10 scaffold_427 58917 . G T 4309.66 . AB=0.5;ABP=3.0103;AC=20;AF=0.108696;AN=184;AO=167;CIGAR=1X;DP=1515;DPB=1515;DPRA=1.04907;EPP=3.0233;EPPR=5.58772;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.8383;NS=92;NUMALT=1;ODDS=0.286763;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=6002;QR=48543;RO=1348;RPP=365.646;RPPR=2921.48;RUN=1;SAF=83;SAP=3.0233;SAR=84;SRF=695;SRP=5.8519;SRR=653;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.1382:14:14:488:0:0:0,-4.21442,-10 1/1:11.0385:10:0:0:10:356:-10,-3.0103,0 0/1:99:17:7:254:10:333:-10,0,-10 0/0:54.1279:13:13:492:0:0:0,-3.91339,-10 0/0:51.1176:12:12:444:0:0:0,-3.61236,-10 0/0:39.0764:8:8:277:0:0:0,-2.40824,-10 0/0:99:38:38:1375:0:0:0,-10,-10 0/0:81.2205:22:22:785:0:0:0,-6.62266,-10 0/0:48.1073:11:11:402:0:0:0,-3.31133,-10 0/0:24.0249:3:3:112:0:0:0,-0.90309,-10 0/0:30.0455:5:5:185:0:0:0,-1.50515,-10 0/0:24.0249:3:3:114:0:0:0,-0.90309,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:99:36:36:1283:0:0:0,-10,-10 0/0:99:31:31:1117:0:0:0,-9.33193,-10 0/1:99:30:18:674:12:455:-10,0,-10 0/1:99:18:9:314:9:316:-10,0,-10 0/0:51.1176:12:12:444:0:0:0,-3.61236,-10 0/0:60.1485:15:15:560:0:0:0,-4.51545,-10 0/0:99:40:40:1442:0:0:0,-10,-10 0/1:99:14:8:295:6:205:-10,0,-10 0/0:84.2308:23:23:840:0:0:0,-6.92369,-10 0/0:42.0867:9:9:342:0:0:0,-2.70927,-10 0/0:72.1897:19:19:713:0:0:0,-5.71957,-10 0/0:96.2706:27:27:945:0:0:0,-8.12781,-10 0/0:81.2205:22:22:782:0:0:0,-6.62266,-10 0/0:57.1382:14:14:522:0:0:0,-4.21442,-10 0/0:36.0661:7:7:266:0:0:0,-2.10721,-10 1/1:35.1209:18:0:0:18:671:-10,-5.41854,0 0/1:99:25:12:429:13:468:-10,0,-10 0/0:30.0455:5:5:139:0:0:0,-1.50515,-10 0/0:48.1073:11:11:370:0:0:0,-3.31133,-10 0/0:57.1382:14:14:523:0:0:0,-4.21442,-10 0/0:51.1176:12:12:412:0:0:0,-3.61236,-10 0/0:66.1691:17:17:616:0:0:0,-5.11751,-10 0/0:48.1073:11:11:405:0:0:0,-3.31133,-10 1/1:17.0591:12:0:0:12:456:-10,-3.61236,0 0/0:99:39:39:1372:0:0:0,-10,-10 0/0:63.1588:16:16:598:0:0:0,-4.81648,-10 0/0:48.1073:11:11:381:0:0:0,-3.31133,-10 0/0:64.1082:25:24:834:1:15:0,-4.62781,-10 0/0:66.1691:17:17:600:0:0:0,-5.11751,-10 0/0:60.1485:15:15:510:0:0:0,-4.51545,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:54.1279:13:13:470:0:0:0,-3.91339,-10 0/1:99:11:3:114:8:300:-10,0,-9.54615 0/1:99:36:23:830:13:489:-10,0,-10 0/0:66.1691:17:17:576:0:0:0,-5.11751,-10 0/0:57.1382:14:14:481:0:0:0,-4.21442,-10 0/0:81.2205:22:22:739:0:0:0,-6.62266,-10 0/0:51.1176:12:12:441:0:0:0,-3.61236,-10 0/0:72.1897:19:19:680:0:0:0,-5.71957,-10 0/0:63.1588:16:16:577:0:0:0,-4.81648,-10 0/1:0.65612:8:0:0:8:289:-10,-2.40824,0 0/1:99:27:18:609:9:335:-10,0,-10 0/0:39.0764:8:8:295:0:0:0,-2.40824,-10 0/0:45.097:10:10:364:0:0:0,-3.0103,-10 0/1:1.42931:9:0:0:9:272:-10,-2.70927,0 0/0:45.097:10:10:377:0:0:0,-3.0103,-10 0/0:33.0558:6:6:223:0:0:0,-1.80618,-10 0/0:69.1794:18:18:668:0:0:0,-5.41854,-10 0/0:0.39413:14:13:462:1:38:-0.731708,0,-10 0/0:99:29:29:1046:0:0:0,-8.72987,-10 0/0:54.1279:13:13:453:0:0:0,-3.91339,-10 0/0:36.0661:7:7:228:0:0:0,-2.10721,-10 0/0:84.2308:23:23:813:0:0:0,-6.92369,-10 0/0:81.2205:22:22:789:0:0:0,-6.62266,-10 0/0:33.0558:6:6:220:0:0:0,-1.80618,-10 0/0:99:28:28:997:0:0:0,-8.42884,-10 0/0:45.097:10:10:360:0:0:0,-3.0103,-10 0/0:48.1073:11:11:391:0:0:0,-3.31133,-10 0/0:84.2308:23:23:840:0:0:0,-6.92369,-10 0/0:84.2308:23:23:822:0:0:0,-6.92369,-10 0/0:54.1279:13:13:490:0:0:0,-3.91339,-10 0/0:96.2706:27:27:983:0:0:0,-8.12781,-10 0/0:72.1897:19:19:700:0:0:0,-5.71957,-10 0/0:48.1073:11:11:414:0:0:0,-3.31133,-10 0/0:42.0867:9:9:332:0:0:0,-2.70927,-10 0/0:36.0661:7:7:251:0:0:0,-2.10721,-10 0/0:33.0558:6:6:223:0:0:0,-1.80618,-10 0/0:93.261:26:26:956:0:0:0,-7.82678,-10 0/0:75.2:20:20:738:0:0:0,-6.0206,-10 0/0:72.1897:19:19:671:0:0:0,-5.71957,-10 0/0:66.1691:17:17:595:0:0:0,-5.11751,-10 0/0:57.1382:14:14:519:0:0:0,-4.21442,-10 0/0:24.0249:3:3:102:0:0:0,-0.90309,-9.52 1/1:44.1518:21:0:0:21:762:-10,-6.32163,0 0/0:57.1382:14:14:503:0:0:0,-4.21442,-10 0/1:24.4984:4:3:114:1:38:-3.19794,0,-10 0/0:60.1485:15:15:549:0:0:0,-4.51545,-10 0/1:99:9:3:112:6:204:-10,0,-9.66834 0/0:54.1279:13:13:476:0:0:0,-3.91339,-10 scaffold_427 105968 . G A 117.332 . AB=0.375;ABP=5.18177;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1X;DP=1311;DPB=1311;DPRA=0.982073;EPP=3.32051;EPPR=3.74523;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9923;NS=92;NUMALT=1;ODDS=10.7125;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=243;QR=46738;RO=1303;RPP=18.2106;RPPR=2823.76;RUN=1;SAF=3;SAP=3.32051;SAR=4;SRF=642;SRP=3.61191;SRR=661;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.6667:6:6:219:0:0:0,-1.80618,-10 0/0:50.6461:4:4:145:0:0:0,-1.20412,-10 0/0:83.7594:15:15:547:0:0:0,-4.51545,-10 0/0:65.6976:9:9:329:0:0:0,-2.70927,-10 0/0:65.6976:9:9:316:0:0:0,-2.70927,-10 0/0:53.6564:5:5:185:0:0:0,-1.50515,-10 0/0:99:26:26:900:0:0:0,-7.82678,-10 0/0:99:22:22:779:0:0:0,-6.62266,-10 0/0:62.6873:8:8:285:0:0:0,-2.40824,-10 0/0:62.6873:8:8:292:0:0:0,-2.40824,-10 0/0:59.677:7:7:238:0:0:0,-2.10721,-10 0/0:56.6667:6:6:212:0:0:0,-1.80618,-10 0/0:99:25:25:919:0:0:0,-7.52575,-10 0/0:99:26:26:892:0:0:0,-7.82678,-10 0/0:77.7388:13:13:472:0:0:0,-3.91339,-10 0/0:89.7795:17:17:637:0:0:0,-5.11751,-10 0/0:80.749:14:14:494:0:0:0,-4.21442,-10 0/0:56.6667:6:6:216:0:0:0,-1.80618,-10 0/0:86.7695:16:16:589:0:0:0,-4.81648,-10 0/0:99:29:29:971:0:0:0,-8.72987,-10 0/0:89.7795:17:17:622:0:0:0,-5.11751,-10 0/0:99:30:30:1127:0:0:0,-9.0309,-10 0/0:50.6461:4:4:152:0:0:0,-1.20412,-10 0/0:80.749:14:14:510:0:0:0,-4.21442,-10 0/0:80.749:14:14:496:0:0:0,-4.21442,-10 0/0:95.7987:19:19:681:0:0:0,-5.71957,-10 0/0:83.7594:15:15:545:0:0:0,-4.51545,-10 0/0:77.7388:13:13:471:0:0:0,-3.91339,-10 0/0:92.7903:18:18:631:0:0:0,-5.41854,-10 0/0:83.7594:15:15:555:0:0:0,-4.51545,-10 0/0:53.6564:5:5:184:0:0:0,-1.50515,-10 0/0:53.6564:5:5:166:0:0:0,-1.50515,-10 0/0:68.7079:10:10:376:0:0:0,-3.0103,-10 0/0:59.677:7:7:239:0:0:0,-2.10721,-10 0/0:74.7285:12:12:452:0:0:0,-3.61236,-10 0/0:56.6667:6:6:201:0:0:0,-1.80618,-10 0/0:65.6976:9:9:314:0:0:0,-2.70927,-10 0/0:80.749:14:14:528:0:0:0,-4.21442,-10 0/0:80.749:14:14:499:0:0:0,-4.21442,-10 0/0:83.7594:15:15:552:0:0:0,-4.51545,-10 0/0:98.8109:20:20:744:0:0:0,-6.0206,-10 0/0:83.7594:15:15:506:0:0:0,-4.51545,-10 0/0:77.7388:13:13:489:0:0:0,-3.91339,-10 0/1:99:16:10:361:6:227:-10,0,-10 0/0:77.7388:13:13:428:0:0:0,-3.91339,-10 0/0:74.7285:12:12:409:0:0:0,-3.61236,-10 0/0:99:36:36:1274:0:0:0,-10,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:77.7388:13:13:470:0:0:0,-3.91339,-10 0/0:99:22:22:797:0:0:0,-6.62266,-10 0/0:56.6667:6:6:226:0:0:0,-1.80618,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:62.6873:8:8:274:0:0:0,-2.40824,-10 0/0:50.6461:4:4:140:0:0:0,-1.20412,-10 0/0:99:27:27:938:0:0:0,-8.12781,-10 0/0:62.6873:8:8:265:0:0:0,-2.40824,-10 0/0:80.749:14:14:470:0:0:0,-4.21442,-10 0/0:47.6358:4:3:114:0:0:0,-0.90309,-10 0/0:98.8109:20:20:713:0:0:0,-6.0206,-10 0/0:68.7079:10:10:338:0:0:0,-3.0103,-10 0/0:98.8109:20:20:678:0:0:0,-6.0206,-10 0/0:95.7987:19:19:680:0:0:0,-5.71957,-10 0/0:98.8109:20:20:744:0:0:0,-6.0206,-10 0/0:92.7903:18:18:636:0:0:0,-5.41854,-10 0/0:47.6358:3:3:114:0:0:0,-0.90309,-10 0/0:83.7594:15:15:560:0:0:0,-4.51545,-10 0/0:92.7903:18:18:615:0:0:0,-5.41854,-10 0/0:62.6873:8:8:304:0:0:0,-2.40824,-10 0/0:99:33:33:1180:0:0:0,-9.93399,-10 0/0:46.5242:12:11:399:1:16:0,-0.933179,-10 0/0:62.6873:8:8:291:0:0:0,-2.40824,-10 0/0:80.749:14:14:476:0:0:0,-4.21442,-10 0/0:68.7079:10:10:380:0:0:0,-3.0103,-10 0/0:77.7388:13:13:454:0:0:0,-3.91339,-10 0/0:99:21:21:755:0:0:0,-6.32163,-10 0/0:59.677:7:7:256:0:0:0,-2.10721,-10 0/0:89.7795:17:17:605:0:0:0,-5.11751,-10 0/0:89.7795:17:17:593:0:0:0,-5.11751,-10 0/0:50.6461:4:4:152:0:0:0,-1.20412,-10 0/0:74.7285:12:12:447:0:0:0,-3.61236,-10 0/0:99:27:27:965:0:0:0,-8.12781,-10 0/0:92.7903:18:18:622:0:0:0,-5.41854,-10 0/0:74.7285:12:12:453:0:0:0,-3.61236,-10 0/0:86.7695:16:16:583:0:0:0,-4.81648,-10 0/0:98.8109:20:20:694:0:0:0,-6.0206,-10 0/0:65.6976:9:9:310:0:0:0,-2.70927,-10 0/0:77.7388:13:13:481:0:0:0,-3.91339,-10 0/0:68.7079:10:10:377:0:0:0,-3.0103,-10 0/0:50.6461:4:4:152:0:0:0,-1.20412,-10 0/0:83.7594:15:15:530:0:0:0,-4.51545,-10 0/0:74.7285:12:12:451:0:0:0,-3.61236,-10 0/0:95.7987:19:19:719:0:0:0,-5.71957,-10 scaffold_427 105998 . C T 422.352 . AB=0.580645;ABP=4.76149;AC=2;AF=0.0108696;AN=184;AO=19;CIGAR=1X;DP=1323;DPB=1323;DPRA=1.06865;EPP=4.03889;EPPR=3.03694;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.987;NS=92;NUMALT=1;ODDS=7.18626;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=672;QR=47654;RO=1304;RPP=44.2683;RPPR=2638.36;RUN=1;SAF=11;SAP=4.03889;SAR=8;SRF=631;SRP=5.94778;SRR=673;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.2586:6:6:225:0:0:0,-1.80618,-10 0/0:34.238:4:4:152:0:0:0,-1.20412,-10 0/0:67.3513:15:15:558:0:0:0,-4.51545,-10 0/0:46.2792:8:8:304:0:0:0,-2.40824,-10 0/0:49.2895:9:9:330:0:0:0,-2.70927,-10 0/0:37.2483:5:5:190:0:0:0,-1.50515,-10 0/0:99:26:26:972:0:0:0,-7.82678,-10 0/0:91.4334:23:23:834:0:0:0,-6.92369,-10 0/0:49.2895:9:9:324:0:0:0,-2.70927,-10 0/0:46.2792:8:8:272:0:0:0,-2.40824,-10 0/0:43.2689:7:7:250:0:0:0,-2.10721,-10 0/0:40.2586:6:6:195:0:0:0,-1.80618,-10 0/1:99:25:13:469:12:434:-10,0,-10 0/0:99:26:26:930:0:0:0,-7.82678,-10 0/0:61.3307:13:13:458:0:0:0,-3.91339,-10 0/0:73.3719:17:17:643:0:0:0,-5.11751,-10 0/0:64.341:14:14:521:0:0:0,-4.21442,-10 0/1:1.52646e-05:6:0:0:6:223:-10,-1.80618,0 0/0:73.3719:17:17:627:0:0:0,-5.11751,-10 0/0:99:30:30:1075:0:0:0,-9.0309,-10 0/0:73.3719:17:17:643:0:0:0,-5.11751,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:34.238:4:4:152:0:0:0,-1.20412,-10 0/0:67.3513:15:15:561:0:0:0,-4.51545,-10 0/0:64.341:14:14:490:0:0:0,-4.21442,-10 0/0:79.3925:19:19:709:0:0:0,-5.71957,-10 0/0:67.3513:15:15:558:0:0:0,-4.51545,-10 0/0:61.3307:13:13:490:0:0:0,-3.91339,-10 0/0:76.3822:18:18:638:0:0:0,-5.41854,-10 0/0:67.3513:15:15:562:0:0:0,-4.51545,-10 0/0:37.2483:5:5:190:0:0:0,-1.50515,-10 0/0:37.2483:5:5:188:0:0:0,-1.50515,-10 0/0:52.2998:10:10:376:0:0:0,-3.0103,-10 0/0:43.2689:7:7:262:0:0:0,-2.10721,-10 0/0:58.3204:12:12:436:0:0:0,-3.61236,-10 0/0:40.2586:6:6:198:0:0:0,-1.80618,-10 0/0:52.2998:10:10:375:0:0:0,-3.0103,-10 0/0:64.341:14:14:522:0:0:0,-4.21442,-10 0/0:64.341:14:14:482:0:0:0,-4.21442,-10 0/0:70.3616:16:16:606:0:0:0,-4.81648,-10 0/0:82.4028:20:20:709:0:0:0,-6.0206,-10 0/0:67.3513:15:15:509:0:0:0,-4.51545,-10 0/0:61.3307:13:13:486:0:0:0,-3.91339,-10 0/0:70.3616:16:16:607:0:0:0,-4.81648,-10 0/0:61.3307:13:13:468:0:0:0,-3.91339,-10 0/0:58.3204:12:12:415:0:0:0,-3.61236,-10 0/0:99:36:36:1337:0:0:0,-10,-10 0/0:97.4532:25:25:919:0:0:0,-7.52575,-10 0/0:61.3307:13:13:484:0:0:0,-3.91339,-10 0/0:88.4233:22:22:799:0:0:0,-6.62266,-10 0/0:40.2586:6:6:206:0:0:0,-1.80618,-10 0/0:99:35:35:1314:0:0:0,-10,-10 0/0:46.2792:8:8:279:0:0:0,-2.40824,-10 0/0:37.2483:5:5:190:0:0:0,-1.50515,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:46.2792:8:8:285:0:0:0,-2.40824,-10 0/0:61.3307:13:13:463:0:0:0,-3.91339,-10 0/0:34.238:4:4:129:0:0:0,-1.20412,-10 0/0:82.4028:20:20:726:0:0:0,-6.0206,-10 0/0:52.2998:10:10:349:0:0:0,-3.0103,-10 0/0:82.4028:20:20:734:0:0:0,-6.0206,-10 0/0:85.413:21:21:758:0:0:0,-6.32163,-10 0/0:85.413:21:21:780:0:0:0,-6.32163,-10 0/0:76.3822:18:18:635:0:0:0,-5.41854,-10 0/0:31.2277:3:3:113:0:0:0,-0.90309,-10 0/0:44.323:15:14:520:1:15:0,-1.83936,-10 0/0:76.3822:18:18:624:0:0:0,-5.41854,-10 0/0:46.2792:8:8:291:0:0:0,-2.40824,-10 0/0:99:33:33:1214:0:0:0,-9.93399,-10 0/0:58.3204:12:12:449:0:0:0,-3.61236,-10 0/0:46.2792:8:8:282:0:0:0,-2.40824,-10 0/0:64.341:14:14:531:0:0:0,-4.21442,-10 0/0:52.2998:10:10:380:0:0:0,-3.0103,-10 0/0:64.341:14:14:531:0:0:0,-4.21442,-10 0/0:85.413:21:21:773:0:0:0,-6.32163,-10 0/0:43.2689:7:7:255:0:0:0,-2.10721,-10 0/0:76.3822:18:18:642:0:0:0,-5.41854,-10 0/0:73.3719:17:17:632:0:0:0,-5.11751,-10 0/0:34.238:4:4:147:0:0:0,-1.20412,-10 0/0:58.3204:12:12:430:0:0:0,-3.61236,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:79.3925:19:19:690:0:0:0,-5.71957,-10 0/0:58.3204:12:12:442:0:0:0,-3.61236,-10 0/0:70.3616:16:16:568:0:0:0,-4.81648,-10 0/0:79.3925:19:19:699:0:0:0,-5.71957,-10 0/0:49.2895:9:9:288:0:0:0,-2.70927,-10 0/0:61.3307:13:13:469:0:0:0,-3.91339,-10 0/0:52.2998:10:10:360:0:0:0,-3.0103,-10 0/0:34.238:4:4:152:0:0:0,-1.20412,-10 0/0:67.3513:15:15:562:0:0:0,-4.51545,-10 0/0:61.3307:13:13:482:0:0:0,-3.91339,-10 0/0:79.3925:19:19:714:0:0:0,-5.71957,-10 scaffold_427 106020 . G A 79.3893 . AB=0.277778;ABP=10.7311;AC=1;AF=0.00543478;AN=184;AO=5;CIGAR=1X;DP=1311;DPB=1311;DPRA=1.26682;EPP=3.44459;EPPR=7.50621;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.987;NS=92;NUMALT=1;ODDS=11.678;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=186;QR=47071;RO=1306;RPP=13.8677;RPPR=2838.95;RUN=1;SAF=3;SAP=3.44459;SAR=2;SRF=627;SRP=7.50621;SRR=679;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.748:6:6:214:0:0:0,-1.80618,-10 0/0:53.7274:4:4:150:0:0:0,-1.20412,-10 0/0:86.8405:15:15:531:0:0:0,-4.51545,-10 0/0:65.7686:8:8:301:0:0:0,-2.40824,-10 0/0:68.7789:9:9:336:0:0:0,-2.70927,-10 0/0:56.7377:5:5:188:0:0:0,-1.50515,-10 0/0:99:25:25:913:0:0:0,-7.52575,-10 0/0:99:23:23:833:0:0:0,-6.92369,-10 0/0:68.7789:9:9:316:0:0:0,-2.70927,-10 0/0:65.7686:8:8:295:0:0:0,-2.40824,-10 0/0:62.7583:7:7:233:0:0:0,-2.10721,-10 0/0:59.748:6:6:200:0:0:0,-1.80618,-10 0/0:99:25:25:931:0:0:0,-7.52575,-10 0/0:99:25:25:909:0:0:0,-7.52575,-10 0/0:80.8201:13:13:471:0:0:0,-3.91339,-10 0/0:92.8605:17:17:637:0:0:0,-5.11751,-10 0/0:83.8303:14:14:518:0:0:0,-4.21442,-10 0/0:59.748:6:6:224:0:0:0,-1.80618,-10 0/0:92.8605:17:17:621:0:0:0,-5.11751,-10 0/0:99:30:30:1052:0:0:0,-9.0309,-10 0/0:92.8605:17:17:635:0:0:0,-5.11751,-10 0/0:99:30:30:1083:0:0:0,-9.0309,-10 0/0:53.7274:4:4:152:0:0:0,-1.20412,-10 0/0:86.8405:15:15:559:0:0:0,-4.51545,-10 0/0:83.8303:14:14:479:0:0:0,-4.21442,-10 0/0:98.8824:19:19:669:0:0:0,-5.71957,-10 0/0:86.8405:15:15:542:0:0:0,-4.51545,-10 0/0:80.8201:13:13:478:0:0:0,-3.91339,-10 0/0:95.8718:18:18:663:0:0:0,-5.41854,-10 0/0:86.8405:15:15:563:0:0:0,-4.51545,-10 0/0:56.7377:5:5:158:0:0:0,-1.50515,-10 0/0:56.7377:5:5:181:0:0:0,-1.50515,-10 0/0:71.7892:10:10:350:0:0:0,-3.0103,-10 0/0:62.7583:7:7:243:0:0:0,-2.10721,-10 0/0:77.8098:12:12:407:0:0:0,-3.61236,-10 0/0:59.748:6:6:214:0:0:0,-1.80618,-10 0/0:71.7892:10:10:370:0:0:0,-3.0103,-10 0/0:83.8303:14:14:477:0:0:0,-4.21442,-10 0/0:77.8098:12:12:426:0:0:0,-3.61236,-10 0/0:89.8506:16:16:601:0:0:0,-4.81648,-10 0/0:98.8824:19:19:656:0:0:0,-5.71957,-10 0/0:86.8405:15:15:532:0:0:0,-4.51545,-10 0/0:80.8201:13:13:455:0:0:0,-3.91339,-10 0/0:89.8506:16:16:596:0:0:0,-4.81648,-10 0/0:80.8201:13:13:452:0:0:0,-3.91339,-10 0/0:77.8098:12:12:446:0:0:0,-3.61236,-10 0/0:99:35:35:1274:0:0:0,-10,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:80.8201:13:13:461:0:0:0,-3.91339,-10 0/0:99:22:22:752:0:0:0,-6.62266,-10 0/0:59.748:6:6:203:0:0:0,-1.80618,-10 0/0:99:34:34:1281:0:0:0,-10,-10 0/0:65.7686:8:8:280:0:0:0,-2.40824,-10 0/0:56.7377:5:5:190:0:0:0,-1.50515,-10 0/0:99:26:26:927:0:0:0,-7.82678,-10 0/0:62.7583:7:7:259:0:0:0,-2.10721,-10 0/0:80.8201:13:13:468:0:0:0,-3.91339,-10 0/0:53.7274:4:4:139:0:0:0,-1.20412,-10 0/0:99:20:20:741:0:0:0,-6.0206,-10 0/0:71.7892:10:10:332:0:0:0,-3.0103,-10 0/0:99:20:20:739:0:0:0,-6.0206,-10 0/0:99:21:21:761:0:0:0,-6.32163,-10 0/0:99:21:21:777:0:0:0,-6.32163,-10 0/0:89.8506:16:16:553:0:0:0,-4.81648,-10 0/0:50.7171:3:3:91:0:0:0,-0.90309,-8.49333 0/0:86.8405:15:15:534:0:0:0,-4.51545,-10 0/1:79.3893:18:13:449:5:186:-10,0,-10 0/0:65.7686:8:8:278:0:0:0,-2.40824,-10 0/0:99:33:33:1204:0:0:0,-9.93399,-10 0/0:77.8098:12:12:451:0:0:0,-3.61236,-10 0/0:65.7686:8:8:282:0:0:0,-2.40824,-10 0/0:83.8303:14:14:456:0:0:0,-4.21442,-10 0/0:71.7892:10:10:368:0:0:0,-3.0103,-10 0/0:83.8303:14:14:495:0:0:0,-4.21442,-10 0/0:99:21:21:746:0:0:0,-6.32163,-10 0/0:62.7583:7:7:252:0:0:0,-2.10721,-10 0/0:95.8718:18:18:638:0:0:0,-5.41854,-10 0/0:92.8605:17:17:593:0:0:0,-5.11751,-10 0/0:53.7274:4:4:152:0:0:0,-1.20412,-10 0/0:77.8098:12:12:425:0:0:0,-3.61236,-10 0/0:99:27:27:995:0:0:0,-8.12781,-10 0/0:95.8718:18:18:666:0:0:0,-5.41854,-10 0/0:77.8098:12:12:433:0:0:0,-3.61236,-10 0/0:89.8506:16:16:581:0:0:0,-4.81648,-10 0/0:98.8824:19:19:656:0:0:0,-5.71957,-10 0/0:65.7686:8:8:259:0:0:0,-2.40824,-10 0/0:80.8201:13:13:475:0:0:0,-3.91339,-10 0/0:71.7892:10:10:357:0:0:0,-3.0103,-10 0/0:53.7274:4:4:152:0:0:0,-1.20412,-10 0/0:86.8405:15:15:559:0:0:0,-4.51545,-10 0/0:80.8201:13:13:483:0:0:0,-3.91339,-10 0/0:98.8824:19:19:715:0:0:0,-5.71957,-10 scaffold_427 194155 . C T 1029.93 . AB=0.565217;ABP=3.86001;AC=3;AF=0.016129;AN=186;AO=40;CIGAR=1X;DP=2200;DPB=2200;DPRA=1.05814;EPP=3.0103;EPPR=5.13754;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9597;NS=93;NUMALT=1;ODDS=4.4502;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1468;QR=78839;RO=2160;RPP=89.8692;RPPR=4693.39;RUN=1;SAF=20;SAP=3.0103;SAR=20;SRF=1103;SRP=5.13754;SRR=1057;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:35:35:1306:0:0:0,-10,-10 0/0:49.5237:11:11:387:0:0:0,-3.31133,-10 0/0:70.5958:18:18:669:0:0:0,-5.41854,-10 0/0:64.5752:16:16:582:0:0:0,-4.81648,-10 0/0:85.6472:23:23:833:0:0:0,-6.92369,-10 0/0:55.5443:13:13:476:0:0:0,-3.91339,-10 0/0:99:33:33:1253:0:0:0,-9.93399,-10 0/0:99:33:33:1193:0:0:0,-9.93399,-10 0/0:82.637:22:22:825:0:0:0,-6.62266,-10 0/0:34.4722:6:6:222:0:0:0,-1.80618,-10 0/0:43.5031:9:9:341:0:0:0,-2.70927,-10 0/0:49.5237:11:11:383:0:0:0,-3.31133,-10 0/0:99:51:51:1879:0:0:0,-10,-10 0/0:99:42:42:1544:0:0:0,-10,-10 0/0:91.6676:25:25:905:0:0:0,-7.52575,-10 0/0:99:42:42:1534:0:0:0,-10,-10 0/0:85.6472:23:23:837:0:0:0,-6.92369,-10 0/0:49.5237:11:11:397:0:0:0,-3.31133,-10 0/0:99:32:32:1159:0:0:0,-9.63296,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:85.6472:23:23:839:0:0:0,-6.92369,-10 0/0:99:36:36:1242:0:0:0,-10,-10 0/0:55.5443:13:13:459:0:0:0,-3.91339,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/0:99:32:32:1172:0:0:0,-9.63296,-10 0/0:99:30:30:1123:0:0:0,-9.0309,-10 0/0:58.5546:14:14:514:0:0:0,-4.21442,-10 0/0:61.5649:15:15:553:0:0:0,-4.51545,-10 0/0:99:29:29:1085:0:0:0,-8.72987,-10 0/0:99:51:51:1890:0:0:0,-10,-10 0/0:43.5031:9:9:333:0:0:0,-2.70927,-10 0/0:28.4516:4:4:147:0:0:0,-1.20412,-10 0/0:79.6267:21:21:719:0:0:0,-6.32163,-10 0/0:43.5031:9:9:336:0:0:0,-2.70927,-10 0/0:85.6472:23:23:840:0:0:0,-6.92369,-10 0/0:49.5237:11:11:407:0:0:0,-3.31133,-10 0/0:55.5443:13:13:485:0:0:0,-3.91339,-10 0/0:99:37:37:1336:0:0:0,-10,-10 0/0:99:28:28:1041:0:0:0,-8.42884,-10 0/0:58.5546:14:14:532:0:0:0,-4.21442,-10 0/0:99:34:34:1242:0:0:0,-10,-10 0/0:76.6164:20:20:701:0:0:0,-6.0206,-10 0/0:79.6267:21:21:710:0:0:0,-6.32163,-10 0/0:99:35:35:1285:0:0:0,-10,-10 0/0:99:32:32:1172:0:0:0,-9.63296,-10 0/0:70.5958:18:18:653:0:0:0,-5.41854,-10 0/0:99:61:61:2278:0:0:0,-10,-10 0/0:99:38:38:1393:0:0:0,-10,-10 0/0:46.5134:10:10:367:0:0:0,-3.0103,-10 0/0:99:49:49:1782:0:0:0,-10,-10 0/0:58.5546:14:14:503:0:0:0,-4.21442,-10 0/0:99:42:42:1521:0:0:0,-10,-10 0/0:79.6267:21:21:779:0:0:0,-6.32163,-10 0/0:55.5443:13:13:461:0:0:0,-3.91339,-10 0/0:99:38:38:1366:0:0:0,-10,-10 0/0:73.6061:19:19:676:0:0:0,-5.71957,-10 0/0:73.6061:19:19:655:0:0:0,-5.71957,-10 0/0:43.5031:9:9:309:0:0:0,-2.70927,-10 0/0:91.6676:25:25:939:0:0:0,-7.52575,-10 0/0:73.6061:19:19:694:0:0:0,-5.71957,-10 0/0:99:46:46:1677:0:0:0,-10,-10 0/0:64.5752:16:16:608:0:0:0,-4.81648,-10 0/0:99:36:36:1336:0:0:0,-10,-10 0/0:99:33:33:1229:0:0:0,-9.93399,-10 0/0:64.5752:16:16:600:0:0:0,-4.81648,-10 0/0:99:30:30:1081:0:0:0,-9.0309,-10 0/0:76.6164:20:20:718:0:0:0,-6.0206,-10 0/0:49.5237:11:11:407:0:0:0,-3.31133,-10 0/0:99:47:47:1710:0:0:0,-10,-10 0/0:52.534:12:12:449:0:0:0,-3.61236,-10 0/0:88.6574:24:24:890:0:0:0,-7.22472,-10 0/0:99:32:32:1103:0:0:0,-9.63296,-10 0/0:94.6775:26:26:945:0:0:0,-7.82678,-10 0/0:73.6061:19:19:722:0:0:0,-5.71957,-10 0/0:99:31:31:1106:0:0:0,-9.33193,-10 0/0:46.5134:10:10:379:0:0:0,-3.0103,-10 0/0:76.6164:20:20:744:0:0:0,-6.0206,-10 0/0:61.5649:15:15:557:0:0:0,-4.51545,-10 0/0:40.4928:8:8:304:0:0:0,-2.40824,-10 0/0:79.6267:21:21:747:0:0:0,-6.32163,-10 0/0:85.6472:23:23:816:0:0:0,-6.92369,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:99:34:34:1241:0:0:0,-10,-10 0/0:85.6472:23:23:859:0:0:0,-6.92369,-10 0/1:99:23:10:335:13:482:-10,0,-10 0/0:34.4722:6:6:228:0:0:0,-1.80618,-10 0/0:88.6574:24:24:900:0:0:0,-7.22472,-10 1/1:21.4279:27:0:0:27:986:-10,-8.12781,0 0/0:46.5134:10:10:365:0:0:0,-3.0103,-10 0/0:67.5855:17:17:624:0:0:0,-5.11751,-10 0/0:99:30:30:1060:0:0:0,-9.0309,-10 0/0:37.4825:7:7:248:0:0:0,-2.10721,-10 scaffold_427 215246 . A G 565.909 . AB=0.8;ABP=26.4622;AC=2;AF=0.0108696;AN=184;AO=26;CIGAR=1X;DP=1585;DPB=1585;DPRA=1.10802;EPP=3.0103;EPPR=3.3671;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=60;NS=92;NUMALT=1;ODDS=3.8227;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=942;QR=57762;RO=1558;RPP=59.4686;RPPR=3291.29;RUN=1;SAF=13;SAP=3.0103;SAR=13;SRF=776;SRP=3.06048;SRR=782;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:72.0335:18:18:681:0:0:0,-5.41854,-10 0/0:78.054:20:20:749:0:0:0,-6.0206,-10 0/1:99:16:6:228:10:360:-10,0,-10 0/0:53.9717:12:12:447:0:0:0,-3.61236,-10 0/0:50.9614:11:11:408:0:0:0,-3.31133,-10 0/0:32.8996:5:5:186:0:0:0,-1.50515,-10 0/0:99:36:36:1342:0:0:0,-10,-10 0/0:81.0642:21:21:786:0:0:0,-6.32163,-10 0/0:41.9305:8:8:304:0:0:0,-2.40824,-10 0/0:26.879:3:3:114:0:0:0,-0.90309,-10 0/0:26.879:3:3:114:0:0:0,-0.90309,-10 0/0:32.8996:5:5:188:0:0:0,-1.50515,-10 0/0:99:29:29:1074:0:0:0,-8.72987,-10 0/0:99:34:34:1263:0:0:0,-10,-10 0/0:84.0746:22:22:818:0:0:0,-6.62266,-10 0/0:84.0746:22:22:803:0:0:0,-6.62266,-10 0/0:75.0437:19:19:721:0:0:0,-5.71957,-10 0/0:38.9202:7:7:265:0:0:0,-2.10721,-10 0/0:81.0642:21:21:795:0:0:0,-6.32163,-10 0/0:99:40:40:1483:0:0:0,-10,-10 0/0:59.9923:14:14:519:0:0:0,-4.21442,-10 0/0:99:29:29:1080:0:0:0,-8.72987,-10 0/0:41.9305:8:8:299:0:0:0,-2.40824,-10 0/0:84.0746:22:22:827:0:0:0,-6.62266,-10 0/0:75.0437:19:19:695:0:0:0,-5.71957,-10 0/0:0.0925791:15:14:525:1:37:-0.360641,0,-10 0/0:69.0232:17:17:622:0:0:0,-5.11751,-10 0/0:47.9511:10:10:366:0:0:0,-3.0103,-10 0/0:72.0335:18:18:684:0:0:0,-5.41854,-10 0/0:81.0642:21:21:786:0:0:0,-6.32163,-10 0/0:26.879:3:3:110:0:0:0,-0.90309,-10 0/0:50.9614:11:11:418:0:0:0,-3.31133,-10 0/1:0.0106495:14:0:0:14:510:-10,-4.21442,0 0/0:53.9717:12:12:428:0:0:0,-3.61236,-10 0/0:63.0026:15:15:561:0:0:0,-4.51545,-10 0/0:41.9305:8:8:265:0:0:0,-2.40824,-10 0/0:59.9923:14:14:519:0:0:0,-4.21442,-10 0/0:63.771:31:30:1093:1:35:0,-4.34057,-10 0/0:66.0129:16:16:576:0:0:0,-4.81648,-10 0/0:47.9511:10:10:378:0:0:0,-3.0103,-10 0/0:99:29:29:1087:0:0:0,-8.72987,-10 0/0:87.0844:23:23:817:0:0:0,-6.92369,-10 0/0:66.0129:16:16:595:0:0:0,-4.81648,-10 0/0:99:35:35:1310:0:0:0,-10,-10 0/0:59.9923:14:14:504:0:0:0,-4.21442,-10 0/0:69.0232:17:17:635:0:0:0,-5.11751,-10 0/0:99:43:43:1606:0:0:0,-10,-10 0/0:84.0746:22:22:829:0:0:0,-6.62266,-10 0/0:50.9614:11:11:414:0:0:0,-3.31133,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:53.9717:12:12:448:0:0:0,-3.61236,-10 0/0:96.1152:26:26:976:0:0:0,-7.82678,-10 0/0:35.9099:6:6:228:0:0:0,-1.80618,-10 0/0:44.9408:9:9:328:0:0:0,-2.70927,-10 0/0:96.1152:26:26:980:0:0:0,-7.82678,-10 0/0:59.9923:14:14:501:0:0:0,-4.21442,-10 0/0:75.0437:19:19:691:0:0:0,-5.71957,-10 0/0:47.9511:11:10:366:0:0:0,-3.0103,-10 0/0:56.982:13:13:472:0:0:0,-3.91339,-10 0/0:50.9614:11:11:405:0:0:0,-3.31133,-10 0/0:99:30:30:1138:0:0:0,-9.0309,-10 0/0:47.9511:10:10:378:0:0:0,-3.0103,-10 0/0:99:29:29:1084:0:0:0,-8.72987,-10 0/0:69.0232:17:17:604:0:0:0,-5.11751,-10 0/0:35.9099:6:6:205:0:0:0,-1.80618,-10 0/0:90.0951:24:24:855:0:0:0,-7.22472,-10 0/0:63.0026:15:15:570:0:0:0,-4.51545,-10 0/0:44.9408:9:9:342:0:0:0,-2.70927,-10 0/0:99:32:32:1212:0:0:0,-9.63296,-10 0/0:41.9305:8:8:304:0:0:0,-2.40824,-10 0/0:72.0335:18:18:658:0:0:0,-5.41854,-10 0/0:90.0951:24:24:875:0:0:0,-7.22472,-10 0/0:75.0437:19:19:696:0:0:0,-5.71957,-10 0/0:29.8893:4:4:138:0:0:0,-1.20412,-10 0/0:99:28:28:1060:0:0:0,-8.42884,-10 0/0:41.9305:8:8:282:0:0:0,-2.40824,-10 0/0:32.8996:5:5:185:0:0:0,-1.50515,-10 0/0:69.0232:17:17:644:0:0:0,-5.11751,-10 0/0:26.879:3:3:114:0:0:0,-0.90309,-10 0/0:47.9511:10:10:380:0:0:0,-3.0103,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:96.1152:26:26:986:0:0:0,-7.82678,-10 0/0:87.0844:23:23:856:0:0:0,-6.92369,-10 0/0:69.0232:17:17:619:0:0:0,-5.11751,-10 0/0:56.982:13:13:482:0:0:0,-3.91339,-10 0/0:56.982:13:13:491:0:0:0,-3.91339,-10 0/0:56.982:13:13:470:0:0:0,-3.91339,-10 0/0:66.0129:16:16:585:0:0:0,-4.81648,-10 0/0:41.9305:8:8:281:0:0:0,-2.40824,-10 0/0:69.0232:17:17:631:0:0:0,-5.11751,-10 0/0:81.0642:21:21:768:0:0:0,-6.32163,-10 0/0:90.0951:24:24:876:0:0:0,-7.22472,-10 scaffold_427 274523 . G T 2766.57 . AB=0.546392;ABP=6.63688;AC=9;AF=0.048913;AN=184;AO=106;CIGAR=1X;DP=1769;DPB=1769;DPRA=1.13594;EPP=14.81;EPPR=5.54281;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9747;NS=92;NUMALT=1;ODDS=2.79843;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3803;QR=60740;RO=1660;RPP=233.186;RPPR=3607.65;RUN=1;SAF=65;SAP=14.81;SAR=41;SRF=852;SRP=5.54281;SRR=808;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.9847:17:17:623:0:0:0,-5.11751,-10 0/0:33.892:8:8:299:0:0:0,-2.40824,-10 0/0:91.087:27:27:977:0:0:0,-8.12781,-10 0/0:48.9435:14:13:463:0:0:0,-3.91339,-10 0/1:56.1394:5:3:101:2:76:-6.71485,0,-8.92152 0/0:45.9332:12:12:452:0:0:0,-3.61236,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:67.0053:19:19:719:0:0:0,-5.71957,-10 0/0:36.9023:9:9:333:0:0:0,-2.70927,-10 0/0:18.8405:3:3:114:0:0:0,-0.90309,-10 0/0:33.892:8:8:304:0:0:0,-2.40824,-10 0/0:39.9126:10:10:372:0:0:0,-3.0103,-10 0/0:99:44:44:1610:0:0:0,-10,-10 0/0:99:36:36:1303:0:0:0,-10,-10 0/0:76.0362:22:22:799:0:0:0,-6.62266,-10 0/1:99:28:14:517:14:517:-10,0,-10 0/1:99:19:7:266:12:443:-10,0,-10 0/0:33.892:8:8:299:0:0:0,-2.40824,-10 0/0:76.0362:22:22:822:0:0:0,-6.62266,-10 0/0:99:35:35:1289:0:0:0,-10,-10 0/0:54.9641:15:15:547:0:0:0,-4.51545,-10 0/0:99:31:31:1153:0:0:0,-9.33193,-10 0/0:12.8199:1:1:38:0:0:0,-0.30103,-3.8 0/1:99:23:10:370:13:467:-10,0,-10 0/0:82.0567:24:24:832:0:0:0,-7.22472,-10 0/1:99:29:14:508:15:536:-10,0,-10 0/0:54.9641:15:15:564:0:0:0,-4.51545,-10 0/0:42.9229:11:11:409:0:0:0,-3.31133,-10 0/0:88.077:26:26:949:0:0:0,-7.82678,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:30.8817:7:7:264:0:0:0,-2.10721,-10 0/0:30.8817:7:7:264:0:0:0,-2.10721,-10 0/0:70.0156:20:20:715:0:0:0,-6.0206,-10 0/0:51.9538:14:14:510:0:0:0,-4.21442,-10 0/0:82.0567:24:24:898:0:0:0,-7.22472,-10 0/0:39.9126:10:10:374:0:0:0,-3.0103,-10 0/0:39.9126:10:10:367:0:0:0,-3.0103,-10 0/0:76.0362:22:22:832:0:0:0,-6.62266,-10 0/0:70.0156:20:20:747:0:0:0,-6.0206,-10 0/0:57.9744:16:16:590:0:0:0,-4.81648,-10 0/0:99:34:34:1201:0:0:0,-10,-10 0/0:70.0156:20:20:736:0:0:0,-6.0206,-10 0/0:63.995:18:18:641:0:0:0,-5.41854,-10 0/0:45.9332:12:12:449:0:0:0,-3.61236,-10 0/0:76.0362:23:22:794:0:0:0,-6.62266,-10 0/0:60.9847:17:17:645:0:0:0,-5.11751,-10 0/0:99:41:41:1493:0:0:0,-10,-10 0/0:76.0362:23:22:796:0:0:0,-6.62266,-10 0/0:45.9332:12:12:443:0:0:0,-3.61236,-10 0/0:97.1054:29:29:1031:0:0:0,-8.72987,-10 0/0:51.9538:14:14:528:0:0:0,-4.21442,-10 0/1:99:33:20:732:13:477:-10,0,-10 0/0:63.995:18:18:658:0:0:0,-5.41854,-10 0/0:21.8508:4:4:152:0:0:0,-1.20412,-10 0/0:99:46:46:1668:0:0:0,-10,-10 0/0:48.9435:13:13:454:0:0:0,-3.91339,-10 0/0:67.0053:19:19:713:0:0:0,-5.71957,-10 0/0:42.9229:11:11:414:0:0:0,-3.31133,-10 0/0:88.077:26:26:936:0:0:0,-7.82678,-10 0/0:33.892:8:8:291:0:0:0,-2.40824,-10 0/0:99:30:30:1112:0:0:0,-9.0309,-10 0/0:48.9435:13:13:486:0:0:0,-3.91339,-10 0/0:99:44:44:1637:0:0:0,-10,-10 0/0:67.0053:19:19:675:0:0:0,-5.71957,-10 0/0:51.9538:14:14:508:0:0:0,-4.21442,-10 0/0:97.1054:29:29:1084:0:0:0,-8.72987,-10 0/0:39.9126:10:10:376:0:0:0,-3.0103,-10 0/0:45.9332:12:12:442:0:0:0,-3.61236,-10 0/0:99:36:36:1319:0:0:0,-10,-10 0/0:51.9538:14:14:478:0:0:0,-4.21442,-10 0/1:0.229435:11:0:0:11:379:-10,-3.31133,0 0/1:99:28:12:416:16:534:-10,0,-10 0/1:99:18:8:303:10:374:-10,0,-10 0/0:51.9538:14:14:522:0:0:0,-4.21442,-10 0/0:99:32:32:1169:0:0:0,-9.63296,-10 0/0:51.9538:14:14:510:0:0:0,-4.21442,-10 0/0:60.9847:17:17:635:0:0:0,-5.11751,-10 0/0:60.9847:17:17:599:0:0:0,-5.11751,-10 0/0:30.8817:7:7:257:0:0:0,-2.10721,-10 0/0:30.8817:7:7:265:0:0:0,-2.10721,-10 0/0:99:30:30:1064:0:0:0,-9.0309,-10 0/0:88.077:26:26:924:0:0:0,-7.82678,-10 0/0:67.0053:19:19:658:0:0:0,-5.71957,-10 0/0:82.0567:24:24:895:0:0:0,-7.22472,-10 0/0:99:34:34:1243:0:0:0,-10,-10 0/0:21.8508:4:4:149:0:0:0,-1.20412,-10 0/0:57.9744:16:16:592:0:0:0,-4.81648,-10 0/0:51.9538:14:14:482:0:0:0,-4.21442,-10 0/0:21.8508:4:4:151:0:0:0,-1.20412,-10 0/0:39.9126:10:10:376:0:0:0,-3.0103,-10 0/0:85.0669:25:25:940:0:0:0,-7.52575,-10 0/0:70.0156:20:20:722:0:0:0,-6.0206,-10 scaffold_427 340056 . C A 2061.11 . AB=0.475;ABP=3.87889;AC=6;AF=0.0322581;AN=186;AO=78;CIGAR=1X;DP=2106;DPB=2106;DPRA=1.13341;EPP=3.45573;EPPR=4.81111;GTI=1;LEN=1;MEANALT=1;MQM=49.0385;MQMR=59.7198;NS=93;NUMALT=1;ODDS=4.42678;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2820;QR=74011;RO=2027;RPP=172.385;RPPR=4378.57;RUN=1;SAF=37;SAP=3.45573;SAR=41;SRF=990;SRP=5.37674;SRR=1037;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.4464:8:8:300:0:0:0,-2.40824,-10 0/0:31.4155:5:5:190:0:0:0,-1.50515,-10 0/0:64.5288:16:16:575:0:0:0,-4.81648,-10 0/0:40.4464:8:8:294:0:0:0,-2.40824,-10 0/1:99:12:6:218:6:204:-10,0,-10 0/0:37.4361:7:7:265:0:0:0,-2.10721,-10 0/1:99:59:24:878:35:1279:-10,0,-10 0/0:99:36:36:1295:0:0:0,-10,-10 0/0:64.5288:16:16:607:0:0:0,-4.81648,-10 0/0:31.4155:5:5:188:0:0:0,-1.50515,-10 0/0:49.4773:11:11:384:0:0:0,-3.31133,-10 0/0:22.3846:2:2:76:0:0:0,-0.60206,-7.22 0/1:99:29:18:647:11:410:-10,0,-10 0/0:99:36:35:1228:0:0:0,-10,-10 0/0:99:34:34:1280:0:0:0,-10,-10 0/0:99:29:29:1069:0:0:0,-8.72987,-10 0/0:53.579:21:20:745:1:16:0,-3.39941,-10 0/0:67.5391:17:17:620:0:0:0,-5.11751,-10 0/0:97.6435:27:27:957:0:0:0,-8.12781,-10 0/0:99:46:46:1655:0:0:0,-10,-10 0/0:76.57:20:20:744:0:0:0,-6.0206,-10 0/0:97.6435:27:27:995:0:0:0,-8.12781,-10 0/0:40.4464:8:8:287:0:0:0,-2.40824,-10 0/1:99:20:12:452:8:300:-10,0,-10 0/0:99:35:35:1257:0:0:0,-10,-10 0/0:99:33:33:1187:0:0:0,-9.93399,-10 0/0:70.5494:18:18:678:0:0:0,-5.41854,-10 0/0:55.4979:13:13:476:0:0:0,-3.91339,-10 0/0:99:34:34:1240:0:0:0,-10,-10 0/0:99:38:38:1406:0:0:0,-10,-10 0/0:31.4155:5:5:164:0:0:0,-1.50515,-10 0/0:37.4361:7:7:253:0:0:0,-2.10721,-10 0/0:57.3873:22:21:795:1:15:0,-3.78024,-10 0/0:52.4876:12:12:452:0:0:0,-3.61236,-10 0/0:99:29:29:1083:0:0:0,-8.72987,-10 0/0:58.5082:14:14:529:0:0:0,-4.21442,-10 0/0:64.5288:16:16:559:0:0:0,-4.81648,-10 0/0:99:28:28:1004:0:0:0,-8.42884,-10 0/0:55.4979:13:13:469:0:0:0,-3.91339,-10 0/0:58.5082:14:14:517:0:0:0,-4.21442,-10 0/0:99:35:35:1257:0:0:0,-10,-10 0/0:99:31:31:1168:0:0:0,-9.33193,-10 0/0:85.6007:23:23:866:0:0:0,-6.92369,-10 0/0:99:36:36:1322:0:0:0,-10,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:73.5597:19:19:716:0:0:0,-5.71957,-10 0/0:99:58:58:2137:0:0:0,-10,-10 0/0:99:37:37:1317:0:0:0,-10,-10 0/0:73.5597:19:19:708:0:0:0,-5.71957,-10 0/0:99:72:72:2578:0:0:0,-10,-10 0/0:58.5082:14:14:497:0:0:0,-4.21442,-10 0/0:99:46:46:1697:0:0:0,-10,-10 0/0:94.6325:26:26:984:0:0:0,-7.82678,-10 0/0:40.4464:8:8:292:0:0:0,-2.40824,-10 0/0:99:42:42:1516:0:0:0,-10,-10 0/0:76.57:20:20:734:0:0:0,-6.0206,-10 0/0:99:28:28:981:0:0:0,-8.42884,-10 0/0:19.3743:1:1:37:0:0:0,-0.30103,-3.7 0/0:67.5391:17:17:598:0:0:0,-5.11751,-10 0/0:52.4876:12:12:452:0:0:0,-3.61236,-10 0/0:99:29:29:1002:0:0:0,-8.72987,-10 0/0:97.6435:27:27:1000:0:0:0,-8.12781,-10 0/1:99:37:24:862:13:482:-10,0,-10 0/0:82.5905:22:22:781:0:0:0,-6.62266,-10 0/0:67.5391:17:17:630:0:0:0,-5.11751,-10 0/0:73.5597:19:19:713:0:0:0,-5.71957,-10 0/0:52.4876:12:12:439:0:0:0,-3.61236,-10 0/0:73.5597:19:19:690:0:0:0,-5.71957,-10 0/0:99:48:48:1761:0:0:0,-10,-10 0/0:91.6204:25:25:910:0:0:0,-7.52575,-10 0/0:88.6107:24:24:868:0:0:0,-7.22472,-10 0/0:99:35:35:1296:0:0:0,-10,-10 0/0:99:30:30:1103:0:0:0,-9.0309,-10 0/0:64.5288:16:16:581:0:0:0,-4.81648,-10 0/0:91.6204:25:25:910:0:0:0,-7.52575,-10 0/0:67.5391:17:17:609:0:0:0,-5.11751,-10 0/0:67.5391:17:17:624:0:0:0,-5.11751,-10 0/0:58.5082:14:14:530:0:0:0,-4.21442,-10 0/0:34.4258:6:6:216:0:0:0,-1.80618,-10 0/0:43.4567:9:9:306:0:0:0,-2.70927,-10 0/0:99:39:39:1407:0:0:0,-10,-10 0/0:99:30:30:1078:0:0:0,-9.0309,-10 0/0:99:34:34:1257:0:0:0,-10,-10 0/0:94.6325:26:26:967:0:0:0,-7.82678,-10 0/0:99:33:33:1198:0:0:0,-9.93399,-10 0/1:0.000156884:3:0:0:3:114:-10,-0.90309,0 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:61.5185:15:15:570:0:0:0,-4.51545,-10 0/0:28.4052:4:4:152:0:0:0,-1.20412,-10 0/0:46.467:10:10:378:0:0:0,-3.0103,-10 0/0:46.467:10:10:352:0:0:0,-3.0103,-10 0/0:61.5185:15:15:544:0:0:0,-4.51545,-10 scaffold_427 340088 . T C 61170.4 . AB=0.368421;ABP=5.8675;AC=183;AF=0.983871;AN=186;AO=2069;CIGAR=1X;DP=2106;DPB=2106;DPRA=0;EPP=5.95842;EPPR=5.88603;GTI=2;LEN=1;MEANALT=1;MQM=59.3127;MQMR=60;NS=93;NUMALT=1;ODDS=6.50521;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=74781;QR=1351;RO=37;RPP=4495.79;RPPR=83.3548;RUN=1;SAF=1008;SAP=5.95842;SAR=1061;SRF=22;SRP=5.88603;SRR=15;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:49.3482:8:0:0:8:300:-10,-2.40824,0 1/1:40.3173:5:0:0:5:168:-10,-1.50515,0 1/1:73.4306:16:0:0:16:588:-10,-4.81648,0 1/1:49.3482:8:0:0:8:303:-10,-2.40824,0 1/1:61.3894:12:0:0:12:415:-10,-3.61236,0 1/1:46.3379:7:0:0:7:261:-10,-2.10721,0 1/1:99:60:0:0:60:2178:-10,-10,0 1/1:99:36:0:0:36:1265:-10,-10,0 1/1:73.4306:16:0:0:16:608:-10,-4.81648,0 1/1:40.3173:5:0:0:5:188:-10,-1.50515,0 1/1:58.3791:11:0:0:11:373:-10,-3.31133,0 1/1:31.2864:2:0:0:2:76:-7.22,-0.60206,0 1/1:99:29:0:0:29:1052:-10,-8.72987,0 1/1:99:36:0:0:36:1271:-10,-10,0 1/1:99:34:0:0:34:1252:-10,-10,0 1/1:99:29:0:0:29:1037:-10,-8.72987,0 1/1:88.4812:21:0:0:21:725:-10,-6.32163,0 1/1:76.4409:17:0:0:17:623:-10,-5.11751,0 1/1:99:26:0:0:26:874:-10,-7.82678,0 1/1:99:46:0:0:46:1627:-10,-10,0 1/1:85.4714:20:0:0:20:718:-10,-6.0206,0 1/1:99:27:0:0:27:996:-10,-8.12781,0 1/1:49.3482:8:0:0:8:278:-10,-2.40824,0 1/1:85.4714:20:0:0:20:752:-10,-6.0206,0 1/1:99:35:0:0:35:1278:-10,-10,0 1/1:99:33:0:0:33:1171:-10,-9.93399,0 1/1:79.4511:18:0:0:18:672:-10,-5.41854,0 1/1:64.3997:13:0:0:13:485:-10,-3.91339,0 1/1:99:34:0:0:34:1254:-10,-10,0 1/1:99:38:0:0:38:1343:-10,-10,0 1/1:40.3173:5:0:0:5:188:-10,-1.50515,0 1/1:46.3379:7:0:0:7:266:-10,-2.10721,0 1/1:91.4906:22:0:0:22:813:-10,-6.62266,0 1/1:61.3894:12:0:0:12:439:-10,-3.61236,0 1/1:99:29:0:0:29:1034:-10,-8.72987,0 1/1:67.41:14:0:0:14:519:-10,-4.21442,0 1/1:73.4306:16:0:0:16:542:-10,-4.81648,0 1/1:99:28:0:0:28:1028:-10,-8.42884,0 1/1:64.3997:13:0:0:13:465:-10,-3.91339,0 1/1:67.41:14:0:0:14:509:-10,-4.21442,0 1/1:99:35:0:0:35:1244:-10,-10,0 1/1:99:31:0:0:31:1150:-10,-9.33193,0 1/1:94.5018:23:0:0:23:836:-10,-6.92369,0 1/1:99:36:0:0:36:1299:-10,-10,0 1/1:99:32:0:0:32:1151:-10,-9.63296,0 1/1:82.4613:19:0:0:19:701:-10,-5.71957,0 1/1:99:59:0:0:59:2070:-10,-10,0 1/1:99:37:0:0:37:1342:-10,-10,0 1/1:82.4613:19:0:0:19:710:-10,-5.71957,0 1/1:99:72:0:0:72:2522:-10,-10,0 1/1:67.41:14:0:0:14:500:-10,-4.21442,0 1/1:99:46:0:0:46:1650:-10,-10,0 1/1:99:26:0:0:26:988:-10,-7.82678,0 1/1:49.3482:8:0:0:8:300:-10,-2.40824,0 1/1:99:42:0:0:42:1479:-10,-10,0 1/1:85.4714:20:0:0:20:733:-10,-6.0206,0 1/1:99:28:0:0:28:1001:-10,-8.42884,0 1/1:28.2761:1:0:0:1:38:-3.8,-0.30103,0 1/1:76.4409:17:0:0:17:623:-10,-5.11751,0 0/1:0.00189676:12:12:455:0:0:0,-3.61236,-10 1/1:99:29:0:0:29:1037:-10,-8.72987,0 1/1:99:27:0:0:27:991:-10,-8.12781,0 1/1:99:37:0:0:37:1310:-10,-10,0 1/1:91.4906:22:0:0:22:796:-10,-6.62266,0 1/1:76.4409:17:0:0:17:642:-10,-5.11751,0 0/1:99:19:12:434:7:263:-10,0,-10 0/1:0.00189676:12:12:446:0:0:0,-3.61236,-10 1/1:82.4613:19:0:0:19:709:-10,-5.71957,0 1/1:99:48:0:0:48:1729:-10,-10,0 1/1:99:25:0:0:25:899:-10,-7.52575,0 1/1:97.5113:24:0:0:24:823:-10,-7.22472,0 1/1:99:35:0:0:35:1306:-10,-10,0 1/1:99:30:0:0:30:1099:-10,-9.0309,0 1/1:49.0267:16:1:16:15:542:-10,-2.01236,0 1/1:99:25:0:0:25:914:-10,-7.52575,0 1/1:76.4409:17:0:0:17:628:-10,-5.11751,0 1/1:76.4409:17:0:0:17:585:-10,-5.11751,0 1/1:67.41:14:0:0:14:523:-10,-4.21442,0 1/1:43.3276:6:0:0:6:202:-10,-1.80618,0 1/1:52.3585:9:0:0:9:312:-10,-2.70927,0 1/1:99:39:0:0:39:1407:-10,-10,0 1/1:99:29:0:0:29:1059:-10,-8.72987,0 1/1:99:34:0:0:34:1237:-10,-10,0 1/1:99:26:0:0:26:972:-10,-7.82678,0 1/1:99:33:0:0:33:1223:-10,-9.93399,0 1/1:34.2967:3:0:0:3:114:-10,-0.90309,0 1/1:99:32:0:0:32:1150:-10,-9.63296,0 1/1:70.4203:15:0:0:15:565:-10,-4.51545,0 1/1:37.307:4:0:0:4:152:-10,-1.20412,0 1/1:55.3688:10:0:0:10:370:-10,-3.0103,0 1/1:55.3688:10:0:0:10:348:-10,-3.0103,0 1/1:70.4203:15:0:0:15:567:-10,-4.51545,0 scaffold_432 155050 . T C 763.703 . AB=0.467742;ABP=3.57068;AC=2;AF=0.0108696;AN=184;AO=32;CIGAR=1X;DP=2210;DPB=2210;DPRA=1.39477;EPP=4.09604;EPPR=5.7062;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9931;NS=92;NUMALT=1;ODDS=0.179437;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1182;QR=80543;RO=2178;RPP=72.4974;RPPR=4732.48;RUN=1;SAF=14;SAP=4.09604;SAR=18;SRF=1063;SRP=5.7062;SRR=1115;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:80.5469:18:18:595:0:0:0,-5.41854,-10 0/0:53.4543:9:9:320:0:0:0,-2.70927,-10 0/0:99:39:39:1404:0:0:0,-10,-10 0/0:95.5983:23:23:857:0:0:0,-6.92369,-10 0/0:71.5161:15:15:545:0:0:0,-4.51545,-10 0/0:59.4749:11:11:416:0:0:0,-3.31133,-10 0/0:99:56:56:2100:0:0:0,-10,-10 0/0:99:27:27:946:0:0:0,-8.12781,-10 0/0:53.4543:9:9:340:0:0:0,-2.70927,-10 0/0:47.4337:7:7:264:0:0:0,-2.10721,-10 0/0:56.4646:10:10:365:0:0:0,-3.0103,-10 0/0:74.5264:16:16:584:0:0:0,-4.81648,-10 0/0:99:29:29:1089:0:0:0,-8.72987,-10 0/0:99:56:56:2106:0:0:0,-10,-10 0/0:99:44:44:1626:0:0:0,-10,-10 0/0:92.5881:22:22:811:0:0:0,-6.62266,-10 0/0:95.5983:23:23:864:0:0:0,-6.92369,-10 0/0:50.444:8:8:304:0:0:0,-2.40824,-10 0/0:99:37:37:1345:0:0:0,-10,-10 0/0:99:61:61:2267:0:0:0,-10,-10 0/0:83.5573:19:19:716:0:0:0,-5.71957,-10 0/0:99:40:40:1462:0:0:0,-10,-10 0/1:2.63664:3:3:113:0:0:0,-0.90309,-10 0/0:77.5367:17:17:602:0:0:0,-5.11751,-10 0/0:99:35:35:1247:0:0:0,-10,-10 0/0:99:27:27:1019:0:0:0,-8.12781,-10 0/0:77.5367:17:17:645:0:0:0,-5.11751,-10 0/0:86.5676:20:20:758:0:0:0,-6.0206,-10 0/0:86.5676:20:20:742:0:0:0,-6.0206,-10 0/0:99:48:48:1765:0:0:0,-10,-10 0/0:44.4234:6:6:228:0:0:0,-1.80618,-10 0/0:62.4852:12:12:455:0:0:0,-3.61236,-10 0/0:98.6084:24:24:889:0:0:0,-7.22472,-10 0/0:56.4646:10:10:355:0:0:0,-3.0103,-10 0/0:86.5676:20:20:755:0:0:0,-6.0206,-10 0/0:59.4749:11:11:414:0:0:0,-3.31133,-10 0/0:59.4749:11:11:389:0:0:0,-3.31133,-10 0/0:99:28:28:1035:0:0:0,-8.42884,-10 0/0:65.4955:13:13:483:0:0:0,-3.91339,-10 0/0:98.6084:24:24:887:0:0:0,-7.22472,-10 0/0:99:33:33:1215:0:0:0,-9.93399,-10 0/0:99:26:26:980:0:0:0,-7.82678,-10 0/0:80.5469:18:18:682:0:0:0,-5.41854,-10 0/0:99:34:34:1225:0:0:0,-10,-10 0/0:54.9454:25:24:879:1:36:0,-2.52781,-10 0/0:59.4749:11:11:405:0:0:0,-3.31133,-10 0/0:99:46:46:1708:0:0:0,-10,-10 0/0:99:33:33:1197:0:0:0,-9.93399,-10 0/0:68.5058:14:14:521:0:0:0,-4.21442,-10 0/0:99:55:55:2044:0:0:0,-10,-10 0/0:65.4955:13:13:491:0:0:0,-3.91339,-10 0/0:99:52:52:1931:0:0:0,-10,-10 0/0:77.5367:17:17:642:0:0:0,-5.11751,-10 0/0:59.4749:11:11:417:0:0:0,-3.31133,-10 0/0:99:50:50:1817:0:0:0,-10,-10 0/0:71.5161:15:15:557:0:0:0,-4.51545,-10 0/0:98.6084:24:24:902:0:0:0,-7.22472,-10 0/0:41.4131:5:5:188:0:0:0,-1.50515,-10 0/0:47.2869:23:22:820:1:38:0,-1.76196,-10 0/0:86.5676:20:20:736:0:0:0,-6.0206,-10 0/0:99:30:30:1114:0:0:0,-9.0309,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/1:99:62:33:1237:29:1071:-10,0,-10 0/0:99:28:28:1034:0:0:0,-8.42884,-10 0/0:80.5469:18:18:677:0:0:0,-5.41854,-10 0/0:99:27:27:1016:0:0:0,-8.12781,-10 0/0:95.5983:23:23:873:0:0:0,-6.92369,-10 0/0:89.5779:21:21:766:0:0:0,-6.32163,-10 0/0:99:31:31:1156:0:0:0,-9.33193,-10 0/0:86.5676:20:20:759:0:0:0,-6.0206,-10 0/0:99:26:26:974:0:0:0,-7.82678,-10 0/0:99:43:43:1555:0:0:0,-10,-10 0/0:99:43:43:1577:0:0:0,-10,-10 0/0:53.4543:9:9:340:0:0:0,-2.70927,-10 0/0:99:43:43:1626:0:0:0,-10,-10 0/0:77.5367:17:17:626:0:0:0,-5.11751,-10 0/0:83.5573:19:19:692:0:0:0,-5.71957,-10 0/0:62.4852:12:12:452:0:0:0,-3.61236,-10 0/0:38.4028:4:4:150:0:0:0,-1.20412,-10 0/0:62.4852:12:12:455:0:0:0,-3.61236,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:98.6084:24:24:894:0:0:0,-7.22472,-10 0/0:46.6005:23:22:792:1:37:0,-1.86196,-10 0/0:99:34:34:1238:0:0:0,-10,-10 0/0:99:38:38:1392:0:0:0,-10,-10 0/0:47.4337:7:7:265:0:0:0,-2.10721,-10 0/0:62.4852:12:12:456:0:0:0,-3.61236,-10 0/0:77.5367:17:17:618:0:0:0,-5.11751,-10 0/0:44.4234:6:6:197:0:0:0,-1.80618,-10 0/0:89.5779:21:21:784:0:0:0,-6.32163,-10 0/0:80.5469:18:18:680:0:0:0,-5.41854,-10 0/0:83.5573:19:19:719:0:0:0,-5.71957,-10 scaffold_432 155069 . C T 11571.7 . AB=0.534286;ABP=6.58392;AC=37;AF=0.201087;AN=184;AO=419;CIGAR=1X;DP=2207;DPB=2207;DPRA=1.04493;EPP=5.75185;EPPR=4.58425;GTI=4;LEN=1;MEANALT=1;MQM=59.9761;MQMR=59.9972;NS=92;NUMALT=1;ODDS=1.74617;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=15249;QR=65272;RO=1788;RPP=912.857;RPPR=3885.6;RUN=1;SAF=198;SAP=5.75185;SAR=221;SRF=876;SRP=4.58425;SRR=912;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:61.2013:18:18:652:0:0:0,-5.41854,-10 0/0:34.1086:9:9:306:0:0:0,-2.70927,-10 0/0:99:39:39:1412:0:0:0,-10,-10 0/0:76.2528:23:23:846:0:0:0,-6.92369,-10 0/0:52.1704:15:15:543:0:0:0,-4.51545,-10 0/0:40.1292:11:11:417:0:0:0,-3.31133,-10 0/0:99:56:56:2064:0:0:0,-10,-10 0/0:88.2935:27:27:1008:0:0:0,-8.12781,-10 0/0:34.1086:9:9:337:0:0:0,-2.70927,-10 0/0:28.088:7:7:266:0:0:0,-2.10721,-10 0/0:37.1189:10:10:367:0:0:0,-3.0103,-10 0/0:55.1807:16:16:557:0:0:0,-4.81648,-10 0/0:94.3127:29:29:1092:0:0:0,-8.72987,-10 0/0:99:56:56:2042:0:0:0,-10,-10 0/0:99:44:44:1652:0:0:0,-10,-10 0/0:73.2424:22:22:768:0:0:0,-6.62266,-10 0/0:76.2528:23:23:848:0:0:0,-6.92369,-10 0/0:31.0983:8:8:299:0:0:0,-2.40824,-10 0/1:99:37:18:676:19:672:-10,0,-10 0/0:99:61:61:2283:0:0:0,-10,-10 0/0:64.2116:19:19:696:0:0:0,-5.71957,-10 0/0:99:40:40:1450:0:0:0,-10,-10 0/1:0.0157825:3:0:0:3:101:-9.42667,-0.90309,0 1/1:25.1041:17:0:0:17:642:-10,-5.11751,0 0/0:99:35:35:1265:0:0:0,-10,-10 1/1:55.2071:27:0:0:27:996:-10,-8.12781,0 1/1:25.1041:17:0:0:17:635:-10,-5.11751,0 0/0:67.2219:20:20:745:0:0:0,-6.0206,-10 0/0:67.2219:20:20:725:0:0:0,-6.0206,-10 0/0:99:48:48:1739:0:0:0,-10,-10 0/1:0.127896:6:0:0:6:215:-10,-1.80618,0 1/1:10.0526:12:0:0:12:427:-10,-3.61236,0 0/0:79.2631:24:24:904:0:0:0,-7.22472,-10 0/0:37.1189:10:10:371:0:0:0,-3.0103,-10 1/1:34.135:20:0:0:20:754:-10,-6.0206,0 0/0:40.1292:11:11:406:0:0:0,-3.31133,-10 0/0:40.1292:11:11:396:0:0:0,-3.31133,-10 0/1:99:28:14:528:14:515:-10,0,-10 1/1:13.0629:13:0:0:13:420:-10,-3.91339,0 0/1:99:24:14:525:10:380:-10,0,-10 0/1:99:33:14:517:19:715:-10,0,-10 0/0:58.2567:26:25:926:1:15:0,-4.91181,-10 1/1:28.1144:18:0:0:18:683:-10,-5.41854,0 1/1:76.2791:34:0:0:34:1198:-10,-10,0 1/1:49.1865:25:0:0:25:911:-10,-7.52575,0 0/1:84.9038:10:2:75:8:296:-10,0,-5.76791 0/1:99:46:31:1134:15:513:-10,0,-10 0/1:99:33:16:589:17:628:-10,0,-10 1/1:13.0629:13:0:0:13:476:-10,-3.91339,0 0/0:99:55:55:2004:0:0:0,-10,-10 0/0:46.1498:13:13:454:0:0:0,-3.91339,-10 0/1:99:51:31:1094:20:747:-10,0,-10 1/1:25.1041:17:0:0:17:589:-10,-5.11751,0 0/0:40.1292:11:11:412:0:0:0,-3.31133,-10 0/1:99:50:22:792:28:1038:-10,0,-10 0/0:52.1704:15:15:524:0:0:0,-4.51545,-10 0/1:0.490775:24:1:38:23:868:-10,-2.04451,0 0/1:0.0634772:5:0:0:5:154:-10,-1.50515,0 0/0:76.2528:23:23:861:0:0:0,-6.92369,-10 0/0:67.2219:20:20:698:0:0:0,-6.0206,-10 0/0:97.3211:30:30:1059:0:0:0,-9.0309,-10 0/0:91.3033:28:28:1023:0:0:0,-8.42884,-10 0/0:99:62:61:2256:1:38:0,-10,-10 0/0:91.3033:28:28:1045:0:0:0,-8.42884,-10 0/0:61.2013:18:18:620:0:0:0,-5.41854,-10 0/0:88.2935:27:27:1014:0:0:0,-8.12781,-10 0/0:76.2528:23:23:869:0:0:0,-6.92369,-10 0/0:70.2322:21:21:687:0:0:0,-6.32163,-10 0/0:99:31:31:1098:0:0:0,-9.33193,-10 0/0:67.2219:20:20:731:0:0:0,-6.0206,-10 0/0:85.2834:26:26:964:0:0:0,-7.82678,-10 0/0:99:43:43:1538:0:0:0,-10,-10 0/0:99:43:43:1554:0:0:0,-10,-10 0/0:34.1086:9:9:307:0:0:0,-2.70927,-10 0/0:99:43:43:1590:0:0:0,-10,-10 0/0:58.191:17:17:587:0:0:0,-5.11751,-10 0/0:64.2116:19:19:660:0:0:0,-5.71957,-10 0/0:43.1395:12:12:456:0:0:0,-3.61236,-10 0/0:19.0571:4:4:150:0:0:0,-1.20412,-10 0/0:43.1395:12:12:409:0:0:0,-3.61236,-10 0/0:82.2734:25:25:918:0:0:0,-7.52575,-10 0/0:79.2631:24:24:903:0:0:0,-7.22472,-10 0/0:76.2528:23:23:843:0:0:0,-6.92369,-10 0/0:99:34:34:1228:0:0:0,-10,-10 0/0:99:38:38:1384:0:0:0,-10,-10 0/0:28.088:7:7:256:0:0:0,-2.10721,-10 0/0:43.1395:12:12:445:0:0:0,-3.61236,-10 1/1:25.1041:17:0:0:17:623:-10,-5.11751,0 0/0:25.0777:6:6:224:0:0:0,-1.80618,-10 0/0:70.2322:21:21:792:0:0:0,-6.32163,-10 0/0:61.2013:18:18:666:0:0:0,-5.41854,-10 0/0:64.2116:19:19:693:0:0:0,-5.71957,-10 scaffold_432 188366 . T C 464.524 . AB=0.617647;ABP=7.09778;AC=2;AF=0.0108696;AN=184;AO=22;CIGAR=1X;DP=1250;DPB=1250;DPRA=1.52201;EPP=4.58955;EPPR=9.17077;GTI=0;LEN=1;MEANALT=1;MQM=59.4091;MQMR=59.9519;NS=92;NUMALT=1;ODDS=4.85247;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=732;QR=44666;RO=1227;RPP=50.7827;RPPR=2429.75;RUN=1;SAF=13;SAP=4.58955;SAR=9;SRF=615;SRP=3.02623;SRR=612;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:45.3145:10:10:351:0:0:0,-3.0103,-10 0/0:42.3042:9:9:334:0:0:0,-2.70927,-10 0/0:60.366:15:15:555:0:0:0,-4.51545,-10 0/0:36.2836:7:7:265:0:0:0,-2.10721,-10 0/0:42.3042:9:9:309:0:0:0,-2.70927,-10 0/0:36.2836:7:7:253:0:0:0,-2.10721,-10 0/0:78.4279:21:21:716:0:0:0,-6.32163,-10 0/0:69.3969:18:18:625:0:0:0,-5.41854,-10 0/0:51.3351:12:12:425:0:0:0,-3.61236,-10 0/0:24.2424:3:3:113:0:0:0,-0.90309,-10 0/0:39.2939:8:8:301:0:0:0,-2.40824,-10 0/0:21.2321:2:2:76:0:0:0,-0.60206,-7.22 0/0:69.3969:18:18:675:0:0:0,-5.41854,-10 0/0:84.4483:23:23:855:0:0:0,-6.92369,-10 0/0:57.3557:14:14:506:0:0:0,-4.21442,-10 0/0:72.4072:19:19:626:0:0:0,-5.71957,-10 0/0:75.4175:20:20:748:0:0:0,-6.0206,-10 0/0:27.2527:4:4:148:0:0:0,-1.20412,-10 0/0:54.3454:13:13:494:0:0:0,-3.91339,-10 0/0:87.4585:24:24:888:0:0:0,-7.22472,-10 0/0:36.2836:7:7:246:0:0:0,-2.10721,-10 0/0:99:31:30:1113:0:0:0,-9.0309,-10 0/0:27.2527:4:4:148:0:0:0,-1.20412,-10 0/0:45.3145:10:10:378:0:0:0,-3.0103,-10 0/0:60.366:15:15:537:0:0:0,-4.51545,-10 0/0:51.3351:12:12:438:0:0:0,-3.61236,-10 0/0:39.2939:8:8:304:0:0:0,-2.40824,-10 0/0:54.3454:13:13:492:0:0:0,-3.91339,-10 0/0:48.3248:11:11:416:0:0:0,-3.31133,-10 0/0:99:33:33:1194:0:0:0,-9.93399,-10 0/0:33.2733:6:6:228:0:0:0,-1.80618,-10 0/0:33.2733:6:6:200:0:0:0,-1.80618,-10 0/0:51.3351:12:12:410:0:0:0,-3.61236,-10 0/0:36.2836:7:7:264:0:0:0,-2.10721,-10 0/0:60.366:15:15:558:0:0:0,-4.51545,-10 0/0:51.3351:12:12:441:0:0:0,-3.61236,-10 0/0:60.366:15:15:546:0:0:0,-4.51545,-10 0/0:84.4483:23:23:819:0:0:0,-6.92369,-10 0/0:63.3763:16:16:589:0:0:0,-4.81648,-10 0/0:42.3042:9:9:306:0:0:0,-2.70927,-10 0/0:87.4585:24:24:855:0:0:0,-7.22472,-10 0/0:54.3454:13:13:478:0:0:0,-3.91339,-10 0/0:57.3557:14:14:514:0:0:0,-4.21442,-10 0/0:60.366:15:15:559:0:0:0,-4.51545,-10 0/0:75.4175:20:20:741:0:0:0,-6.0206,-10 0/0:39.2939:8:8:294:0:0:0,-2.40824,-10 0/0:99:29:29:1054:0:0:0,-8.72987,-10 0/0:63.3763:16:16:582:0:0:0,-4.81648,-10 0/0:33.2733:6:6:224:0:0:0,-1.80618,-10 0/0:99:32:32:1206:0:0:0,-9.63296,-10 0/0:45.3145:10:10:348:0:0:0,-3.0103,-10 0/0:69.3969:18:18:660:0:0:0,-5.41854,-10 0/0:69.3969:18:18:678:0:0:0,-5.41854,-10 0/0:21.2321:2:2:67:0:0:0,-0.60206,-6.365 0/0:99:37:37:1312:0:0:0,-10,-10 0/0:51.3351:12:12:456:0:0:0,-3.61236,-10 0/0:81.4382:22:22:803:0:0:0,-6.62266,-10 0/0:30.263:5:5:167:0:0:0,-1.50515,-10 0/0:96.4898:27:27:991:0:0:0,-8.12781,-10 0/0:30.263:5:5:190:0:0:0,-1.50515,-10 0/1:99:14:6:208:8:277:-10,0,-10 0/0:45.3145:10:10:318:0:0:0,-3.0103,-10 0/0:90.4691:25:25:894:0:0:0,-7.52575,-10 0/1:99:20:7:266:13:441:-10,0,-10 0/0:36.2836:7:7:266:0:0:0,-2.10721,-10 0/0:87.4585:24:24:868:0:0:0,-7.22472,-10 0/0:48.3248:11:11:415:0:0:0,-3.31133,-10 0/0:27.2527:4:4:130:0:0:0,-1.20412,-10 0/0:66.3866:17:17:630:0:0:0,-5.11751,-10 0/0:54.3454:13:13:486:0:0:0,-3.91339,-10 0/0:39.2939:8:8:266:0:0:0,-2.40824,-10 0/0:69.3969:18:18:611:0:0:0,-5.41854,-10 0/0:60.366:15:15:567:0:0:0,-4.51545,-10 0/0:66.3866:17:17:642:0:0:0,-5.11751,-10 0/0:81.4382:22:22:768:0:0:0,-6.62266,-10 0/0:39.2939:8:8:280:0:0:0,-2.40824,-10 0/0:36.2836:7:7:262:0:0:0,-2.10721,-10 0/0:48.3248:11:11:388:0:0:0,-3.31133,-10 0/0:33.2733:6:6:226:0:0:0,-1.80618,-10 0/0:27.2527:4:4:152:0:0:0,-1.20412,-10 0/0:69.7789:27:26:961:1:14:0,-5.29645,-10 0/0:72.4072:19:19:698:0:0:0,-5.71957,-10 0/0:42.3042:9:9:318:0:0:0,-2.70927,-10 0/0:42.3042:9:9:340:0:0:0,-2.70927,-10 0/0:45.3145:10:10:354:0:0:0,-3.0103,-10 0/0:27.2527:4:4:148:0:0:0,-1.20412,-10 0/0:63.3763:16:16:598:0:0:0,-4.81648,-10 0/0:42.3042:9:9:342:0:0:0,-2.70927,-10 0/0:30.263:5:5:189:0:0:0,-1.50515,-10 0/0:42.3042:9:9:333:0:0:0,-2.70927,-10 0/0:45.3145:10:10:369:0:0:0,-3.0103,-10 0/0:39.2939:8:8:304:0:0:0,-2.40824,-10 scaffold_432 213756 . A AT 16131.3 . AB=0.505587;ABP=3.10735;AC=74;AF=0.402174;AN=184;AO=587;CIGAR=1M1I2M;DP=1473;DPB=1678.33;DPRA=1.09531;EPP=9.85025;EPPR=3.03258;GTI=2;LEN=1;MEANALT=1.17391;MQM=59.9591;MQMR=59.8848;NS=92;NUMALT=1;ODDS=0.324318;PAIRED=0;PAIREDR=0;PAO=6;PQA=217.5;PQR=217.5;PRO=6;QA=20931;QR=32016;RO=877;RPP=1260.35;RPPR=1770.95;RUN=1;SAF=274;SAP=8.63689;SAR=313;SRF=453;SRP=5.09264;SRR=424;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|1:61.5128:9:2:58:7:214:-10,0,-4.35703 1|1:28.8953:13:0:0:12:417:-10,-3.61236,0 1|1:62.0086:23:0:0:23:835:-10,-6.92369,0 1|1:31.9056:13:0:0:13:453:-10,-3.91339,0 1|1:43.9468:17:0:0:17:618:-10,-5.11751,0 0|0:12.4279:4:4:148:0:0:0,-1.20412,-10 1|1:58.9983:22:0:0:22:774:-10,-6.62266,0 0|0:75.6442:26:25:926:0:0:0,-7.52575,-10 1|1:25.885:11:0:0:11:416:-10,-3.31133,0 0|0:9.41763:3:3:95:0:0:0,-0.90309,-8.86667 0|0:9.41763:3:3:112:0:0:0,-0.90309,-10 1|1:10.8335:6:0:0:6:210:-10,-1.80618,0 0|0:81.6648:27:27:974:0:0:0,-8.12781,-10 0|0:99:35:35:1305:0:0:0,-10,-10 1|1:58.9983:22:0:0:22:813:-10,-6.62266,0 0|0:48.5515:16:16:584:0:0:0,-4.81648,-10 0|1:99:23:8:297:15:530:-10,0,-10 1|1:16.8541:8:0:0:8:271:-10,-2.40824,0 0|1:99:11:8:304:3:111:-9.26615,0,-10 0|1:99:36:17:634:19:674:-10,0,-10 0|1:99:15:9:337:6:213:-10,0,-10 0|1:99:33:16:569:16:553:-10,0,-10 0|0:18.4485:6:6:227:0:0:0,-1.80618,-10 0|0:51.5618:17:17:608:0:0:0,-5.11751,-10 1|1:31.9056:13:0:0:13:487:-10,-3.91339,0 0|0:39.5206:13:13:483:0:0:0,-3.91339,-10 0|0:48.5515:16:16:554:0:0:0,-4.81648,-10 0|1:0.571581:6:0:0:5:185:-10,-1.50515,0 0|0:66.6133:22:22:811:0:0:0,-6.62266,-10 0|1:99:25:9:326:16:536:-10,0,-10 0|0:24.4691:8:8:300:0:0:0,-2.40824,-10 0|0:27.4794:9:9:334:0:0:0,-2.70927,-10 0|0:27.4794:9:9:329:0:0:0,-2.70927,-10 0|0:27.4794:9:9:304:0:0:0,-2.70927,-10 0|0:51.5618:17:17:623:0:0:0,-5.11751,-10 0|0:15.4382:5:5:185:0:0:0,-1.50515,-10 0|0:27.4794:9:9:342:0:0:0,-2.70927,-10 0|1:99:35:14:518:21:720:-10,0,-10 1|1:25.885:11:0:0:11:418:-10,-3.31133,0 0|0:45.5412:15:15:554:0:0:0,-4.51545,-10 0|0:72.6339:24:24:905:0:0:0,-7.22472,-10 0|0:33.5:11:11:410:0:0:0,-3.31133,-10 1|1:37.9262:15:0:0:15:538:-10,-4.51545,0 0|1:99:22:13:470:9:314:-10,0,-10 0|0:30.4897:10:10:355:0:0:0,-3.0103,-10 0|0:60.5927:20:20:724:0:0:0,-6.0206,-10 0|0:99:33:33:1219:0:0:0,-9.93399,-10 0|0:54.5721:18:18:670:0:0:0,-5.41854,-10 0|0:39.5206:13:13:477:0:0:0,-3.91339,-10 0|1:99:30:16:577:14:486:-10,0,-10 0|0:39.5206:13:13:483:0:0:0,-3.91339,-10 0|1:99:29:15:509:14:526:-10,0,-10 0|0:33.5:11:11:392:0:0:0,-3.31133,-10 0|0:18.4485:6:6:219:0:0:0,-1.80618,-10 0|0:99:39:39:1397:0:0:0,-10,-10 1|1:34.9159:14:0:0:14:483:-10,-4.21442,0 0|0:48.5515:16:16:592:0:0:0,-4.81648,-10 0|0:33.5:11:11:399:0:0:0,-3.31133,-10 1|1:34.9159:14:0:0:14:481:-10,-4.21442,0 1|1:22.8747:10:0:0:10:378:-10,-3.0103,0 0|0:69.6236:23:23:860:0:0:0,-6.92369,-10 1|1:28.8953:12:0:0:12:448:-10,-3.61236,0 1|1:95.1206:34:0:0:34:1211:-10,-10,0 0|0:66.6133:22:22:786:0:0:0,-6.62266,-10 1|1:10.8335:7:0:0:6:184:-10,-1.80618,0 0|1:99:20:11:392:9:311:-10,0,-10 0|0:33.5:11:11:410:0:0:0,-3.31133,-10 0|0:36.5103:12:12:422:0:0:0,-3.61236,-10 0|1:99:22:15:541:7:265:-10,0,-10 0|0:18.4485:6:6:211:0:0:0,-1.80618,-10 0|0:45.5412:15:15:523:0:0:0,-4.51545,-10 0|0:63.603:21:21:776:0:0:0,-6.32163,-10 0|0:57.5824:19:19:696:0:0:0,-5.71957,-10 0|0:30.4897:10:10:378:0:0:0,-3.0103,-10 0|0:69.6236:23:23:844:0:0:0,-6.92369,-10 0|0:36.5103:12:12:447:0:0:0,-3.61236,-10 1|1:28.8953:13:0:0:12:410:-10,-3.61236,0 1|1:19.8644:9:0:0:9:339:-10,-2.70927,0 0|1:0.0674669:2:0:0:2:63:-5.985,-0.60206,0 1|1:19.8644:9:0:0:9:339:-10,-2.70927,0 1|1:83.0806:30:0:0:30:1042:-10,-9.0309,0 1|1:49.9674:20:0:0:19:700:-10,-5.71957,0 0|1:99:18:11:407:7:256:-10,0,-10 1|1:52.9777:21:0:0:20:739:-10,-6.0206,0 0|1:99:16:9:339:7:262:-10,0,-10 1|1:10.8335:6:0:0:6:221:-10,-1.80618,0 0|0:45.5412:15:15:558:0:0:0,-4.51545,-10 0|0:60.5927:20:20:719:0:0:0,-6.0206,-10 0|1:76.7574:6:2:68:4:150:-10,0,-5.82991 1|1:46.9571:18:0:0:18:619:-10,-5.41854,0 1|1:25.885:12:0:0:11:401:-10,-3.31133,0 1|1:19.8644:9:0:0:9:317:-10,-2.70927,0 scaffold_432 213789 . T C 271.262 . AB=0.5;ABP=3.0103;AC=1;AF=0.00543478;AN=184;AO=11;CIGAR=1X;DP=1473;DPB=1473;DPRA=1.37974;EPP=3.20771;EPPR=3.86699;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8767;NS=92;NUMALT=1;ODDS=7.66981;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=417;QR=52561;RO=1460;RPP=26.8965;RPPR=3078.54;RUN=1;SAF=6;SAP=3.20771;SAR=5;SRF=707;SRP=6.15745;SRR=753;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.398:10:10:313:0:0:0,-3.0103,-10 0/0:66.4289:13:13:478:0:0:0,-3.91339,-10 0/0:99:24:24:886:0:0:0,-7.22472,-10 0/0:66.4289:13:13:463:0:0:0,-3.91339,-10 0/0:78.4701:17:17:623:0:0:0,-5.11751,-10 0/0:39.3362:4:4:152:0:0:0,-1.20412,-10 0/0:96.5314:23:23:797:0:0:0,-6.92369,-10 0/0:99:26:26:918:0:0:0,-7.82678,-10 0/0:63.4186:12:12:454:0:0:0,-3.61236,-10 0/0:36.3259:3:3:102:0:0:0,-0.90309,-9.52 0/0:36.3259:3:3:114:0:0:0,-0.90309,-10 0/0:45.3568:6:6:205:0:0:0,-1.80618,-10 0/0:99:28:28:942:0:0:0,-8.42884,-10 0/0:99:33:33:1216:0:0:0,-9.93399,-10 0/0:93.5213:22:22:803:0:0:0,-6.62266,-10 0/0:75.4598:16:16:585:0:0:0,-4.81648,-10 0/0:96.5314:23:23:797:0:0:0,-6.92369,-10 0/0:51.3774:8:8:279:0:0:0,-2.40824,-10 0/0:60.4083:11:11:395:0:0:0,-3.31133,-10 0/0:99:36:36:1331:0:0:0,-10,-10 0/0:72.4495:15:15:546:0:0:0,-4.51545,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:45.3568:6:6:228:0:0:0,-1.80618,-10 0/0:78.4701:17:17:608:0:0:0,-5.11751,-10 0/0:66.4289:13:13:489:0:0:0,-3.91339,-10 0/0:66.4289:13:13:486:0:0:0,-3.91339,-10 0/0:75.4598:16:16:520:0:0:0,-4.81648,-10 0/0:42.3465:5:5:167:0:0:0,-1.50515,-10 0/0:93.5213:22:22:797:0:0:0,-6.62266,-10 0/0:99:24:24:853:0:0:0,-7.22472,-10 0/0:51.3774:8:8:278:0:0:0,-2.40824,-10 0/0:54.3877:9:9:340:0:0:0,-2.70927,-10 0/0:54.3877:9:9:318:0:0:0,-2.70927,-10 0/0:54.3877:9:9:290:0:0:0,-2.70927,-10 0/0:78.4701:17:17:643:0:0:0,-5.11751,-10 0/0:42.3465:5:5:168:0:0:0,-1.50515,-10 0/0:54.3877:9:9:341:0:0:0,-2.70927,-10 0/0:99:35:35:1259:0:0:0,-10,-10 0/0:60.4083:11:11:418:0:0:0,-3.31133,-10 0/0:69.4392:14:14:458:0:0:0,-4.21442,-10 0/0:99:24:24:910:0:0:0,-7.22472,-10 0/0:60.4083:11:11:415:0:0:0,-3.31133,-10 0/0:72.4495:15:15:549:0:0:0,-4.51545,-10 0/0:90.5106:21:21:787:0:0:0,-6.32163,-10 0/0:60.4083:11:11:367:0:0:0,-3.31133,-10 0/0:87.5007:20:20:735:0:0:0,-6.0206,-10 0/0:99:30:30:1103:0:0:0,-9.0309,-10 0/0:81.4804:18:18:676:0:0:0,-5.41854,-10 0/0:69.4392:14:14:505:0:0:0,-4.21442,-10 0/0:99:30:30:1043:0:0:0,-9.0309,-10 0/0:66.4289:13:13:479:0:0:0,-3.91339,-10 0/0:99:29:28:986:0:0:0,-8.42884,-10 0/0:60.4083:11:11:353:0:0:0,-3.31133,-10 0/0:45.3568:6:6:225:0:0:0,-1.80618,-10 0/0:99:37:37:1327:0:0:0,-10,-10 0/0:69.4392:14:14:492:0:0:0,-4.21442,-10 0/0:75.4598:16:16:588:0:0:0,-4.81648,-10 0/0:60.4083:11:11:393:0:0:0,-3.31133,-10 0/0:69.4392:14:14:473:0:0:0,-4.21442,-10 0/0:57.398:10:10:379:0:0:0,-3.0103,-10 0/0:96.5314:23:23:805:0:0:0,-6.92369,-10 0/0:63.4186:12:12:442:0:0:0,-3.61236,-10 0/0:99:34:33:1190:0:0:0,-9.93399,-10 0/0:90.5106:21:21:757:0:0:0,-6.32163,-10 0/0:48.3671:7:7:252:0:0:0,-2.10721,-10 0/0:87.5007:20:20:693:0:0:0,-6.0206,-10 0/0:60.4083:11:11:355:0:0:0,-3.31133,-10 0/0:63.4186:12:12:428:0:0:0,-3.61236,-10 0/0:96.5314:23:23:865:0:0:0,-6.92369,-10 0/0:45.3568:6:6:228:0:0:0,-1.80618,-10 0/0:72.4495:15:15:522:0:0:0,-4.51545,-10 0/0:87.5007:20:20:755:0:0:0,-6.0206,-10 0/0:84.4907:19:19:692:0:0:0,-5.71957,-10 0/0:57.398:10:10:371:0:0:0,-3.0103,-10 0/0:99:24:24:880:0:0:0,-7.22472,-10 0/0:60.4083:11:11:393:0:0:0,-3.31133,-10 0/0:66.4289:13:13:455:0:0:0,-3.91339,-10 0/0:54.3877:9:9:340:0:0:0,-2.70927,-10 0/0:33.3156:2:2:75:0:0:0,-0.60206,-7.125 0/0:54.3877:9:9:324:0:0:0,-2.70927,-10 0/0:99:31:31:1101:0:0:0,-9.33193,-10 0/1:99:22:11:390:11:417:-10,0,-10 0/0:81.4804:18:18:672:0:0:0,-5.41854,-10 0/0:90.5106:21:21:777:0:0:0,-6.32163,-10 0/0:75.4598:16:16:600:0:0:0,-4.81648,-10 0/0:48.3671:7:7:258:0:0:0,-2.10721,-10 0/0:72.4495:15:15:523:0:0:0,-4.51545,-10 0/0:84.4907:19:19:707:0:0:0,-5.71957,-10 0/0:45.3568:6:6:196:0:0:0,-1.80618,-10 0/0:87.5007:20:20:704:0:0:0,-6.0206,-10 0/0:63.4186:12:12:449:0:0:0,-3.61236,-10 0/0:54.3877:9:9:326:0:0:0,-2.70927,-10 scaffold_432 213801 . C T 60.1911 . AB=0.454545;ABP=3.20771;AC=1;AF=0.00543478;AN=184;AO=7;CIGAR=1X;DP=1479;DPB=1479;DPRA=0.67704;EPP=10.7656;EPPR=3.6613;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8776;NS=92;NUMALT=1;ODDS=11.889;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=181;QR=52998;RO=1471;RPP=18.2106;RPPR=3051.29;RUN=1;SAF=6;SAP=10.7656;SAR=1;SRF=708;SRP=7.47577;SRR=763;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:75.7156:10:10:338:0:0:0,-3.0103,-10 0/0:61.7799:13:12:441:1:15:0,-1.29945,-10 0/0:99:24:24:908:0:0:0,-7.22472,-10 0/0:84.7464:13:13:490:0:0:0,-3.91339,-10 0/0:96.7878:17:17:593:0:0:0,-5.11751,-10 0/0:60.6641:5:5:179:0:0:0,-1.50515,-10 0/0:99:23:23:845:0:0:0,-6.92369,-10 0/0:99:26:26:942:0:0:0,-7.82678,-10 0/0:81.7361:12:12:454:0:0:0,-3.61236,-10 0/0:54.6435:3:3:77:0:0:0,-0.90309,-7.18667 0/0:54.6435:3:3:111:0:0:0,-0.90309,-10 0/0:63.6744:6:6:180:0:0:0,-1.80618,-10 0/0:99:28:28:940:0:0:0,-8.42884,-10 0/0:99:33:33:1189:0:0:0,-9.93399,-10 0/0:99:22:22:830:0:0:0,-6.62266,-10 0/0:93.7775:16:16:579:0:0:0,-4.81648,-10 0/0:99:23:23:814:0:0:0,-6.92369,-10 0/0:69.695:8:8:279:0:0:0,-2.40824,-10 0/0:78.7259:11:11:395:0:0:0,-3.31133,-10 0/0:99:37:37:1325:0:0:0,-10,-10 0/0:90.7671:15:15:558:0:0:0,-4.51545,-10 0/0:99:33:33:1132:0:0:0,-9.93399,-10 0/0:63.6744:6:6:225:0:0:0,-1.80618,-10 0/0:99:18:18:622:0:0:0,-5.41854,-10 0/0:84.7464:13:13:494:0:0:0,-3.91339,-10 0/0:84.7464:13:13:481:0:0:0,-3.91339,-10 0/0:93.7775:16:16:541:0:0:0,-4.81648,-10 0/0:60.6641:5:5:180:0:0:0,-1.50515,-10 0/0:99:22:22:801:0:0:0,-6.62266,-10 0/0:99:24:24:874:0:0:0,-7.22472,-10 0/0:69.695:8:8:300:0:0:0,-2.40824,-10 0/0:72.7053:9:9:335:0:0:0,-2.70927,-10 0/0:72.7053:9:9:327:0:0:0,-2.70927,-10 0/0:64.3358:9:8:276:1:2:0,-1.55503,-10 0/0:93.7775:16:16:596:0:0:0,-4.81648,-10 0/0:60.6641:5:5:183:0:0:0,-1.50515,-10 0/0:72.7053:9:9:340:0:0:0,-2.70927,-10 0/0:99:35:35:1286:0:0:0,-10,-10 0/0:78.7259:11:11:418:0:0:0,-3.31133,-10 0/0:87.7568:14:14:512:0:0:0,-4.21442,-10 0/0:99:24:24:870:0:0:0,-7.22472,-10 0/0:78.7259:11:11:410:0:0:0,-3.31133,-10 0/0:90.7671:15:15:532:0:0:0,-4.51545,-10 0/0:99:21:21:762:0:0:0,-6.32163,-10 0/0:78.7259:11:11:350:0:0:0,-3.31133,-10 0/0:99:20:20:699:0:0:0,-6.0206,-10 0/0:99:30:30:1115:0:0:0,-9.0309,-10 0/0:99:18:18:676:0:0:0,-5.41854,-10 0/0:87.7568:14:14:516:0:0:0,-4.21442,-10 0/0:99:30:30:1069:0:0:0,-9.0309,-10 0/0:84.7464:13:13:469:0:0:0,-3.91339,-10 0/0:99:29:29:999:0:0:0,-8.72987,-10 0/0:78.7259:11:11:353:0:0:0,-3.31133,-10 0/0:63.6744:6:6:227:0:0:0,-1.80618,-10 0/0:99:37:37:1266:0:0:0,-10,-10 0/0:87.7568:14:14:478:0:0:0,-4.21442,-10 0/0:93.7775:16:16:563:0:0:0,-4.81648,-10 0/0:78.7259:11:11:409:0:0:0,-3.31133,-10 0/0:87.7568:14:14:498:0:0:0,-4.21442,-10 0/0:75.7156:10:10:380:0:0:0,-3.0103,-10 0/0:99:23:23:831:0:0:0,-6.92369,-10 0/0:81.7361:12:12:435:0:0:0,-3.61236,-10 0/0:99:34:34:1217:0:0:0,-10,-10 0/0:99:21:21:781:0:0:0,-6.32163,-10 0/0:66.6847:7:7:235:0:0:0,-2.10721,-10 0/0:99:20:20:725:0:0:0,-6.0206,-10 0/1:60.1911:11:6:201:5:164:-10,0,-10 0/0:81.7361:12:12:414:0:0:0,-3.61236,-10 0/0:99:23:23:857:0:0:0,-6.92369,-10 0/0:63.6744:6:6:228:0:0:0,-1.80618,-10 0/0:90.7671:15:15:520:0:0:0,-4.51545,-10 0/0:99:20:20:743:0:0:0,-6.0206,-10 0/0:99:19:19:689:0:0:0,-5.71957,-10 0/0:75.7156:10:10:374:0:0:0,-3.0103,-10 0/0:99:24:23:841:0:0:0,-6.92369,-10 0/0:78.7259:11:11:395:0:0:0,-3.31133,-10 0/0:90.7671:15:15:504:0:0:0,-4.51545,-10 0/0:72.7053:9:9:341:0:0:0,-2.70927,-10 0/0:51.6332:2:2:72:0:0:0,-0.60206,-6.84 0/0:72.7053:9:9:313:0:0:0,-2.70927,-10 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/0:99:22:22:813:0:0:0,-6.62266,-10 0/0:99:18:18:673:0:0:0,-5.41854,-10 0/0:99:21:21:786:0:0:0,-6.32163,-10 0/0:93.7775:16:16:583:0:0:0,-4.81648,-10 0/0:66.6847:7:7:262:0:0:0,-2.10721,-10 0/0:90.7671:15:15:535:0:0:0,-4.51545,-10 0/0:99:21:21:773:0:0:0,-6.32163,-10 0/0:63.6744:6:6:222:0:0:0,-1.80618,-10 0/0:99:20:20:704:0:0:0,-6.0206,-10 0/0:81.7361:12:12:420:0:0:0,-3.61236,-10 0/0:72.7053:9:9:328:0:0:0,-2.70927,-10 scaffold_432 213871 . C T 55980.8 . AB=0.449367;ABP=10.047;AC=151;AF=0.820652;AN=184;AO=1868;CIGAR=1X;DP=2334;DPB=2334;DPRA=0.99311;EPP=4.68889;EPPR=3.92362;GTI=2;LEN=1;MEANALT=1;MQM=59.9604;MQMR=60;NS=92;NUMALT=1;ODDS=0.0223685;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=69017;QR=16859;RO=466;RPP=4033.3;RPPR=1014.92;RUN=1;SAF=950;SAP=4.20066;SAR=918;SRF=226;SRP=3.92362;SRR=240;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1/1:55.8812:19:0:0:19:652:-10,-5.71957,0 1/1:34.8091:12:0:0:12:441:-10,-3.61236,0 1/1:79.9636:27:0:0:27:1006:-10,-8.12781,0 1/1:22.424:16:1:16:15:570:-10,-2.01236,0 1/1:46.8503:16:0:0:16:590:-10,-4.81648,0 1/1:37.8194:13:0:0:13:467:-10,-3.91339,0 1/1:99:36:0:0:36:1323:-10,-10,0 1/1:99:36:0:0:36:1330:-10,-10,0 1/1:49.8606:17:0:0:17:644:-10,-5.11751,0 1/1:22.7679:8:0:0:8:304:-10,-2.40824,0 1/1:46.8503:16:0:0:16:606:-10,-4.81648,0 1/1:43.84:15:0:0:15:548:-10,-4.51545,0 1/1:85.9839:29:0:0:29:1091:-10,-8.72987,0 1/1:99:50:0:0:50:1860:-10,-10,0 1/1:99:42:0:0:42:1562:-10,-10,0 1/1:99:35:0:0:35:1291:-10,-10,0 1/1:99:43:0:0:43:1586:-10,-10,0 1/1:43.84:15:0:0:15:568:-10,-4.51545,0 0/1:99:33:19:706:14:519:-10,0,-10 1/1:99:49:0:0:49:1793:-10,-10,0 1/1:58.8915:20:0:0:20:746:-10,-6.0206,0 1/1:99:40:0:0:40:1484:-10,-10,0 0/0:24.0045:13:13:479:0:0:0,-3.91339,-10 0/0:99:38:38:1376:0:0:0,-10,-10 1/1:55.8812:19:0:0:19:697:-10,-5.71957,0 0/0:66.1487:27:27:974:0:0:0,-8.12781,-10 0/0:51.0972:22:22:803:0:0:0,-6.62266,-10 1/1:46.8503:16:0:0:16:599:-10,-4.81648,0 1/1:67.9224:23:0:0:23:858:-10,-6.92369,0 1/1:99:41:0:0:41:1511:-10,-10,0 0/1:48.003:8:7:261:1:37:-2.19485,0,-10 0/1:0.799111:7:7:239:0:0:0,-2.10721,-10 1/1:67.9224:23:0:0:23:846:-10,-6.92369,0 1/1:52.8709:18:0:0:18:660:-10,-5.41854,0 0/0:96.248:37:37:1348:0:0:0,-10,-10 1/1:25.7782:9:0:0:9:337:-10,-2.70927,0 1/1:31.7988:11:0:0:11:399:-10,-3.31133,0 1/1:99:41:0:0:41:1517:-10,-10,0 1/1:52.8709:18:0:0:18:679:-10,-5.41854,0 0/1:99:20:9:329:11:417:-10,0,-10 0/1:99:47:25:932:22:815:-10,0,-10 1/1:36.453:29:1:38:28:1042:-10,-3.46747,0 1/1:85.9839:29:0:0:29:1054:-10,-8.72987,0 1/1:99:40:0:0:40:1476:-10,-10,0 0/0:93.2395:36:36:1294:0:0:0,-10,-10 0/1:99:20:8:294:12:451:-10,0,-10 0/1:99:59:36:1302:23:843:-10,0,-10 0/1:99:36:22:822:14:508:-10,0,-10 0/0:48.0869:21:21:771:0:0:0,-6.32163,-10 1/1:99:43:0:0:43:1571:-10,-10,0 1/1:40.8297:14:0:0:14:523:-10,-4.21442,0 0/1:99:40:18:610:22:806:-10,0,-10 0/0:27.0148:14:14:515:0:0:0,-4.21442,-10 1/1:31.7988:11:0:0:11:409:-10,-3.31133,0 0/1:99:50:30:1083:20:754:-10,0,-10 1/1:43.84:15:0:0:15:562:-10,-4.51545,0 0/0:78.1898:31:31:1079:0:0:0,-9.33193,-10 0/0:48.0869:21:21:747:0:0:0,-6.32163,-10 1/1:49.8606:17:0:0:17:628:-10,-5.11751,0 1/1:40.8297:14:0:0:14:516:-10,-4.21442,0 1/1:99:35:0:0:35:1324:-10,-10,0 1/1:73.943:25:0:0:25:946:-10,-7.52575,0 1/1:98.0261:33:0:0:33:1204:-10,-9.93399,0 1/1:64.9121:22:0:0:22:804:-10,-6.62266,0 1/1:46.8503:16:0:0:16:605:-10,-4.81648,0 1/1:82.9738:28:0:0:28:1044:-10,-8.42884,0 1/1:99:36:0:0:36:1298:-10,-10,0 1/1:31.7988:11:0:0:11:417:-10,-3.31133,0 1/1:99:46:0:0:46:1715:-10,-10,0 1/1:31.7988:11:0:0:11:418:-10,-3.31133,0 1/1:92.005:31:0:0:31:1126:-10,-9.33193,0 1/1:99:44:0:0:44:1631:-10,-10,0 1/1:85.9839:29:0:0:29:1072:-10,-8.72987,0 1/1:52.8709:18:0:0:18:678:-10,-5.41854,0 1/1:73.943:25:0:0:25:937:-10,-7.52575,0 1/1:46.8503:16:0:0:16:582:-10,-4.81648,0 1/1:73.943:25:0:0:25:922:-10,-7.52575,0 1/1:10.7267:4:0:0:4:152:-10,-1.20412,0 1/1:10.7267:4:0:0:4:138:-10,-1.20412,0 1/1:25.7782:9:0:0:9:334:-10,-2.70927,0 1/1:99:39:0:0:39:1462:-10,-10,0 1/1:99:35:0:0:35:1288:-10,-10,0 1/1:99:35:0:0:35:1251:-10,-10,0 1/1:99:35:0:0:35:1223:-10,-10,0 1/1:88.9946:30:0:0:30:1128:-10,-9.0309,0 1/1:34.8091:12:0:0:12:430:-10,-3.61236,0 1/1:64.9121:22:0:0:22:764:-10,-6.62266,0 0/0:54.1075:23:23:841:0:0:0,-6.92369,-10 0/1:1.64047:3:0:0:3:114:-10,-0.90309,0 1/1:88.9946:30:0:0:30:1116:-10,-9.0309,0 1/1:58.8915:20:0:0:20:758:-10,-6.0206,0 1/1:49.8606:17:0:0:17:640:-10,-5.11751,0 scaffold_444 23619 . A T 474.158 . AB=0.636364;ABP=8.34028;AC=2;AF=0.0108696;AN=184;AO=21;CIGAR=1X;DP=1502;DPB=1502;DPRA=1.01089;EPP=3.1137;EPPR=3.25809;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9899;NS=92;NUMALT=1;ODDS=6.76798;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=755;QR=53966;RO=1481;RPP=48.6112;RPPR=3218.96;RUN=1;SAF=11;SAP=3.1137;SAR=10;SRF=747;SRP=3.25809;SRR=734;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:57.2745:12:12:433:0:0:0,-3.61236,-10 0/0:66.3054:15:15:564:0:0:0,-4.51545,-10 0/0:63.2951:14:14:523:0:0:0,-4.21442,-10 0/0:48.2436:9:9:307:0:0:0,-2.70927,-10 0/0:54.2642:11:11:413:0:0:0,-3.31133,-10 0/0:69.3157:16:16:565:0:0:0,-4.81648,-10 0/0:81.3569:20:20:736:0:0:0,-6.0206,-10 0/0:99:28:28:1012:0:0:0,-8.42884,-10 0/0:72.326:17:17:613:0:0:0,-5.11751,-10 0/0:42.223:7:7:261:0:0:0,-2.10721,-10 0/0:48.2436:9:9:339:0:0:0,-2.70927,-10 0/0:39.2127:6:6:226:0:0:0,-1.80618,-10 0/0:99:36:36:1341:0:0:0,-10,-10 0/0:87.3774:22:22:815:0:0:0,-6.62266,-10 0/0:93.3957:24:24:856:0:0:0,-7.22472,-10 0/0:63.2951:14:14:530:0:0:0,-4.21442,-10 0/0:81.3569:20:20:714:0:0:0,-6.0206,-10 0/0:45.2333:8:8:293:0:0:0,-2.40824,-10 0/0:75.3363:18:18:659:0:0:0,-5.41854,-10 0/0:99:32:32:1182:0:0:0,-9.63296,-10 0/0:72.326:17:17:638:0:0:0,-5.11751,-10 0/0:93.3957:24:24:883:0:0:0,-7.22472,-10 0/0:45.2333:8:8:289:0:0:0,-2.40824,-10 0/0:60.2848:13:13:446:0:0:0,-3.91339,-10 0/0:66.3054:15:15:528:0:0:0,-4.51545,-10 0/0:90.3866:23:23:856:0:0:0,-6.92369,-10 0/0:57.2745:12:12:429:0:0:0,-3.61236,-10 0/0:45.2333:8:8:286:0:0:0,-2.40824,-10 0/0:99:26:26:939:0:0:0,-7.82678,-10 0/0:81.3569:20:20:754:0:0:0,-6.0206,-10 0/0:30.1818:3:3:114:0:0:0,-0.90309,-10 0/0:45.2333:8:8:262:0:0:0,-2.40824,-10 0/0:72.326:17:17:625:0:0:0,-5.11751,-10 0/0:54.2642:11:11:388:0:0:0,-3.31133,-10 0/0:69.3157:16:16:603:0:0:0,-4.81648,-10 0/0:39.2127:6:6:226:0:0:0,-1.80618,-10 0/0:66.3054:15:15:520:0:0:0,-4.51545,-10 0/0:78.3466:19:19:720:0:0:0,-5.71957,-10 0/0:66.3054:15:15:537:0:0:0,-4.51545,-10 0/0:66.3054:15:15:558:0:0:0,-4.51545,-10 0/0:99:28:28:1016:0:0:0,-8.42884,-10 0/0:66.3054:15:15:538:0:0:0,-4.51545,-10 0/0:78.3466:19:19:645:0:0:0,-5.71957,-10 0/0:72.326:17:17:628:0:0:0,-5.11751,-10 0/0:78.3466:19:19:699:0:0:0,-5.71957,-10 0/0:93.3957:24:24:850:0:0:0,-7.22472,-10 0/0:99:27:27:989:0:0:0,-8.12781,-10 0/0:75.3363:18:18:651:0:0:0,-5.41854,-10 0/0:63.2951:14:14:497:0:0:0,-4.21442,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:51.2539:10:10:332:0:0:0,-3.0103,-10 0/0:90.3866:23:23:843:0:0:0,-6.92369,-10 0/0:57.2745:12:12:441:0:0:0,-3.61236,-10 0/0:39.2127:6:6:210:0:0:0,-1.80618,-10 0/0:90.3866:23:23:793:0:0:0,-6.92369,-10 0/0:45.2333:8:8:288:0:0:0,-2.40824,-10 0/0:63.2951:14:14:497:0:0:0,-4.21442,-10 0/0:45.2333:8:8:304:0:0:0,-2.40824,-10 0/0:96.4079:25:25:940:0:0:0,-7.52575,-10 0/0:51.2539:10:10:378:0:0:0,-3.0103,-10 0/0:99:35:35:1244:0:0:0,-10,-10 0/0:69.3157:16:16:606:0:0:0,-4.81648,-10 0/0:99:32:32:1187:0:0:0,-9.63296,-10 0/0:57.2745:12:12:423:0:0:0,-3.61236,-10 0/0:45.2333:8:8:303:0:0:0,-2.40824,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:57.2745:12:12:452:0:0:0,-3.61236,-10 0/1:0.00497463:14:0:0:14:499:-10,-4.21442,0 0/0:87.3774:22:22:805:0:0:0,-6.62266,-10 0/0:63.2951:14:14:528:0:0:0,-4.21442,-10 0/0:87.3774:22:22:810:0:0:0,-6.62266,-10 0/0:93.3957:24:24:872:0:0:0,-7.22472,-10 0/0:78.3466:19:19:685:0:0:0,-5.71957,-10 0/0:48.2436:9:9:329:0:0:0,-2.70927,-10 0/0:84.3672:21:21:792:0:0:0,-6.32163,-10 0/0:45.2333:8:8:304:0:0:0,-2.40824,-10 0/0:42.223:7:7:238:0:0:0,-2.10721,-10 0/0:66.3054:15:15:561:0:0:0,-4.51545,-10 0/0:30.1818:3:3:109:0:0:0,-0.90309,-10 0/0:51.2539:10:10:363:0:0:0,-3.0103,-10 0/0:99:26:26:974:0:0:0,-7.82678,-10 0/0:96.4079:25:25:912:0:0:0,-7.52575,-10 0/1:99:19:12:448:7:256:-10,0,-10 0/0:78.3466:19:19:685:0:0:0,-5.71957,-10 0/0:66.3054:15:15:566:0:0:0,-4.51545,-10 0/0:39.2127:6:6:226:0:0:0,-1.80618,-10 0/0:42.223:7:7:264:0:0:0,-2.10721,-10 0/0:57.2745:12:12:389:0:0:0,-3.61236,-10 0/0:33.1921:4:4:150:0:0:0,-1.20412,-10 0/0:63.2951:14:14:514:0:0:0,-4.21442,-10 0/0:90.3866:23:23:820:0:0:0,-6.92369,-10 0/0:87.3774:22:22:783:0:0:0,-6.62266,-10 scaffold_444 203884 . C T 992.528 . AB=0.603175;ABP=8.83536;AC=3;AF=0.0163043;AN=184;AO=39;CIGAR=1X;DP=1982;DPB=1982;DPRA=0.961559;EPP=9.74743;EPPR=3.95019;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9671;NS=92;NUMALT=1;ODDS=5.84597;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1449;QR=70691;RO=1943;RPP=87.6977;RPPR=4204.83;RUN=1;SAF=14;SAP=9.74743;SAR=25;SRF=957;SRP=3.95019;SRR=986;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:59.3684:13:13:488:0:0:0,-3.91339,-10 0/0:50.3375:10:10:356:0:0:0,-3.0103,-10 0/0:95.4909:25:25:919:0:0:0,-7.52575,-10 0/0:74.4199:18:18:683:0:0:0,-5.41854,-10 0/1:99:9:2:76:7:264:-10,0,-6.06703 0/0:56.3581:12:12:430:0:0:0,-3.61236,-10 0/0:99:44:44:1558:0:0:0,-10,-10 0/0:74.4199:18:18:668:0:0:0,-5.41854,-10 0/0:44.3169:8:8:287:0:0:0,-2.40824,-10 0/0:29.2654:3:3:114:0:0:0,-0.90309,-10 0/0:38.2963:6:6:192:0:0:0,-1.80618,-10 0/0:50.3375:10:10:338:0:0:0,-3.0103,-10 0/0:99:32:32:1137:0:0:0,-9.63296,-10 0/0:99:40:40:1500:0:0:0,-10,-10 0/0:99:32:32:1114:0:0:0,-9.63296,-10 0/0:86.461:22:22:799:0:0:0,-6.62266,-10 0/0:57.1658:20:19:691:1:15:0,-3.21957,-10 0/0:53.3478:11:11:418:0:0:0,-3.31133,-10 0/0:89.4711:23:23:823:0:0:0,-6.92369,-10 0/0:99:50:50:1814:0:0:0,-10,-10 0/0:83.4505:21:21:782:0:0:0,-6.32163,-10 0/1:99:41:23:827:18:681:-10,0,-10 0/0:41.3066:7:7:264:0:0:0,-2.10721,-10 0/0:86.461:22:22:744:0:0:0,-6.62266,-10 0/0:83.4505:21:21:764:0:0:0,-6.32163,-10 0/0:99:32:32:1175:0:0:0,-9.63296,-10 0/0:62.3787:14:14:495:0:0:0,-4.21442,-10 0/0:89.4711:23:23:784:0:0:0,-6.92369,-10 0/0:99:34:34:1203:0:0:0,-10,-10 0/0:99:53:53:1986:0:0:0,-10,-10 0/0:35.286:5:5:183:0:0:0,-1.50515,-10 0/0:53.3478:11:11:370:0:0:0,-3.31133,-10 0/0:98.5001:26:26:967:0:0:0,-7.82678,-10 0/1:0.0125055:13:0:0:13:489:-10,-3.91339,0 0/0:74.4199:18:18:671:0:0:0,-5.41854,-10 0/0:41.3066:7:7:240:0:0:0,-2.10721,-10 0/0:59.3684:13:13:459:0:0:0,-3.91339,-10 0/0:95.4909:25:25:911:0:0:0,-7.52575,-10 0/0:65.389:15:15:553:0:0:0,-4.51545,-10 0/0:65.389:15:15:560:0:0:0,-4.51545,-10 0/0:99:39:39:1434:0:0:0,-10,-10 0/0:99:28:28:981:0:0:0,-8.42884,-10 0/0:95.4909:25:25:874:0:0:0,-7.52575,-10 0/0:99:44:44:1610:0:0:0,-10,-10 0/0:95.4909:25:25:889:0:0:0,-7.52575,-10 0/0:65.389:15:15:552:0:0:0,-4.51545,-10 0/0:99:49:49:1742:0:0:0,-10,-10 0/0:86.461:22:22:814:0:0:0,-6.62266,-10 0/0:74.4199:18:18:659:0:0:0,-5.41854,-10 0/0:99:32:32:1192:0:0:0,-9.63296,-10 0/0:62.3787:14:14:524:0:0:0,-4.21442,-10 0/0:99:40:40:1430:0:0:0,-10,-10 0/0:65.389:15:15:528:0:0:0,-4.51545,-10 0/0:53.3478:11:11:406:0:0:0,-3.31133,-10 0/0:99:35:35:1303:0:0:0,-10,-10 0/0:53.3478:11:11:409:0:0:0,-3.31133,-10 0/0:99:32:32:1187:0:0:0,-9.63296,-10 0/0:50.3375:10:10:356:0:0:0,-3.0103,-10 0/0:53.3478:11:11:408:0:0:0,-3.31133,-10 0/0:71.4096:17:17:616:0:0:0,-5.11751,-10 0/0:99:30:30:1103:0:0:0,-9.0309,-10 0/0:80.4404:20:20:744:0:0:0,-6.0206,-10 0/0:99:42:42:1539:0:0:0,-10,-10 0/0:86.461:22:22:819:0:0:0,-6.62266,-10 0/0:71.4096:17:17:635:0:0:0,-5.11751,-10 0/0:99:30:30:1117:0:0:0,-9.0309,-10 0/0:86.461:22:22:792:0:0:0,-6.62266,-10 0/0:53.3478:11:11:384:0:0:0,-3.31133,-10 0/0:99:37:37:1367:0:0:0,-10,-10 0/0:53.3478:11:11:404:0:0:0,-3.31133,-10 0/0:65.389:15:15:550:0:0:0,-4.51545,-10 0/0:99:30:30:1091:0:0:0,-9.0309,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:86.461:22:22:814:0:0:0,-6.62266,-10 0/0:86.461:22:22:804:0:0:0,-6.62266,-10 0/0:56.3581:12:12:428:0:0:0,-3.61236,-10 0/0:68.3993:16:16:579:0:0:0,-4.81648,-10 0/0:41.3066:7:7:237:0:0:0,-2.10721,-10 0/0:38.2963:6:6:226:0:0:0,-1.80618,-10 0/0:50.3375:10:10:377:0:0:0,-3.0103,-10 0/0:99:39:39:1408:0:0:0,-10,-10 0/0:99:36:36:1314:0:0:0,-10,-10 0/0:80.4404:20:20:732:0:0:0,-6.0206,-10 0/0:77.4302:19:19:701:0:0:0,-5.71957,-10 0/0:99:30:30:1063:0:0:0,-9.0309,-10 0/0:56.3581:12:12:454:0:0:0,-3.61236,-10 0/0:77.4302:19:19:706:0:0:0,-5.71957,-10 0/0:92.4812:24:24:904:0:0:0,-7.22472,-10 0/0:32.2757:4:4:152:0:0:0,-1.20412,-10 0/0:65.389:15:15:568:0:0:0,-4.51545,-10 0/0:71.4096:17:17:620:0:0:0,-5.11751,-10 0/0:74.4199:18:18:634:0:0:0,-5.41854,-10 scaffold_444 206996 . G A 531.462 . AB=0.705882;ABP=15.5282;AC=3;AF=0.0163043;AN=184;AO=25;CIGAR=1X;DP=1615;DPB=1615;DPRA=0.717391;EPP=3.79203;EPPR=3.79695;GTI=2;LEN=1;MEANALT=1;MQM=49.96;MQMR=51.6101;NS=92;NUMALT=1;ODDS=8.11173;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=857;QR=58188;RO=1590;RPP=57.2971;RPPR=3455.65;RUN=1;SAF=11;SAP=3.79203;SAR=14;SRF=783;SRP=3.79695;SRR=807;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:62.3252:11:11:411:0:0:0,-3.31133,-10 0/0:44.2634:5:5:189:0:0:0,-1.50515,-10 0/0:95.4361:22:22:805:0:0:0,-6.62266,-10 0/0:74.3665:15:15:569:0:0:0,-4.51545,-10 0/0:56.3046:9:9:318:0:0:0,-2.70927,-10 0/0:62.3252:11:11:404:0:0:0,-3.31133,-10 0/0:99:27:27:960:0:0:0,-8.12781,-10 0/0:95.4361:22:22:808:0:0:0,-6.62266,-10 0/1:6.173e-06:5:0:0:5:189:-10,-1.50515,0 0/0:38.2428:3:3:111:0:0:0,-0.90309,-10 0/0:50.284:7:7:266:0:0:0,-2.10721,-10 0/0:50.284:7:7:244:0:0:0,-2.10721,-10 0/0:99:26:26:955:0:0:0,-7.82678,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/0:99:38:38:1432:0:0:0,-10,-10 0/0:77.3768:16:16:605:0:0:0,-4.81648,-10 0/0:83.3972:18:18:643:0:0:0,-5.41854,-10 0/0:53.2943:8:8:277:0:0:0,-2.40824,-10 0/0:89.4182:20:20:737:0:0:0,-6.0206,-10 0/0:99:35:35:1316:0:0:0,-10,-10 0/0:53.2943:8:8:295:0:0:0,-2.40824,-10 0/0:89.4182:20:20:746:0:0:0,-6.0206,-10 0/0:56.3046:9:9:337:0:0:0,-2.70927,-10 0/0:86.4073:19:19:698:0:0:0,-5.71957,-10 0/0:86.4073:19:19:659:0:0:0,-5.71957,-10 0/0:95.4361:22:22:818:0:0:0,-6.62266,-10 0/0:68.3458:13:13:442:0:0:0,-3.91339,-10 0/0:71.3561:14:14:521:0:0:0,-4.21442,-10 0/0:89.4182:20:20:685:0:0:0,-6.0206,-10 0/0:99:35:35:1298:0:0:0,-10,-10 0/0:35.2325:2:2:54:0:0:0,-0.60206,-5.13 0/0:44.2634:5:5:183:0:0:0,-1.50515,-10 0/0:59.3149:10:10:372:0:0:0,-3.0103,-10 0/0:74.3665:15:15:541:0:0:0,-4.51545,-10 0/0:65.3355:12:12:447:0:0:0,-3.61236,-10 0/0:50.284:7:7:266:0:0:0,-2.10721,-10 0/0:77.3768:16:16:581:0:0:0,-4.81648,-10 0/0:83.3972:18:18:644:0:0:0,-5.41854,-10 0/0:62.3252:11:11:395:0:0:0,-3.31133,-10 0/0:83.3972:18:18:645:0:0:0,-5.41854,-10 0/0:99:25:25:940:0:0:0,-7.52575,-10 0/0:77.3768:16:16:569:0:0:0,-4.81648,-10 0/0:80.387:17:17:602:0:0:0,-5.11751,-10 0/0:99:28:28:1016:0:0:0,-8.42884,-10 0/0:98.4439:23:23:825:0:0:0,-6.92369,-10 0/0:50.284:7:7:254:0:0:0,-2.10721,-10 0/0:99:43:43:1541:0:0:0,-10,-10 0/0:92.427:21:21:755:0:0:0,-6.32163,-10 0/0:65.3355:12:12:430:0:0:0,-3.61236,-10 0/0:99:29:29:1068:0:0:0,-8.72987,-10 0/0:68.3458:13:13:494:0:0:0,-3.91339,-10 0/0:99:27:27:1017:0:0:0,-8.12781,-10 0/0:62.3252:11:11:382:0:0:0,-3.31133,-10 0/0:62.3252:11:11:407:0:0:0,-3.31133,-10 0/0:99:38:38:1395:0:0:0,-10,-10 0/0:77.3768:16:16:604:0:0:0,-4.81648,-10 0/0:80.387:17:17:644:0:0:0,-5.11751,-10 0/0:47.2737:6:6:228:0:0:0,-1.80618,-10 0/0:74.3665:15:15:564:0:0:0,-4.51545,-10 0/0:50.284:7:7:253:0:0:0,-2.10721,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:95.4361:22:22:788:0:0:0,-6.62266,-10 0/0:99:32:32:1199:0:0:0,-9.63296,-10 0/0:86.4073:19:19:708:0:0:0,-5.71957,-10 0/0:59.3149:10:10:375:0:0:0,-3.0103,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/1:99:21:10:372:11:361:-10,0,-10 0/1:4.93842e-05:8:0:0:8:293:-10,-2.40824,0 0/0:99:40:40:1447:0:0:0,-10,-10 0/0:62.3252:11:11:415:0:0:0,-3.31133,-10 0/0:74.3665:15:15:567:0:0:0,-4.51545,-10 0/0:99:35:35:1265:0:0:0,-10,-10 0/0:98.4439:23:23:868:0:0:0,-6.92369,-10 0/0:56.6025:17:16:584:1:14:0,-2.48706,-10 0/0:99:26:26:894:0:0:0,-7.82678,-10 0/0:50.284:7:7:254:0:0:0,-2.10721,-10 0/0:80.387:17:17:605:0:0:0,-5.11751,-10 0/0:68.3458:13:13:491:0:0:0,-3.91339,-10 0/0:41.2531:4:4:151:0:0:0,-1.20412,-10 0/0:71.3561:14:14:509:0:0:0,-4.21442,-10 0/0:99:39:39:1455:0:0:0,-10,-10 0/0:99:29:29:1071:0:0:0,-8.72987,-10 0/0:99:29:29:1013:0:0:0,-8.72987,-10 0/0:89.4182:20:20:739:0:0:0,-6.0206,-10 0/0:99:26:26:938:0:0:0,-7.82678,-10 0/0:41.2531:4:4:152:0:0:0,-1.20412,-10 0/0:59.3149:10:10:349:0:0:0,-3.0103,-10 0/0:68.3458:13:13:483:0:0:0,-3.91339,-10 0/0:41.2531:4:4:152:0:0:0,-1.20412,-10 0/0:59.3149:10:10:375:0:0:0,-3.0103,-10 0/0:71.3561:14:14:500:0:0:0,-4.21442,-10 0/0:62.3252:11:11:417:0:0:0,-3.31133,-10 scaffold_444 207033 . G A 680.324 . AB=0.771429;ABP=25.4075;AC=2;AF=0.0108696;AN=184;AO=33;CIGAR=1X;DP=1633;DPB=1633;DPRA=1;EPP=3.0761;EPPR=3.20573;GTI=2;LEN=1;MEANALT=1;MQM=38.7879;MQMR=51.8119;NS=92;NUMALT=1;ODDS=2.90882;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1156;QR=57818;RO=1600;RPP=74.6689;RPPR=3348.3;RUN=1;SAF=16;SAP=3.0761;SAR=17;SRF=779;SRP=5.40435;SRR=821;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:47.0072:11:11:404:0:0:0,-3.31133,-10 0/0:31.9557:6:6:195:0:0:0,-1.80618,-10 0/0:80.1204:22:22:779:0:0:0,-6.62266,-10 0/0:62.0587:16:16:565:0:0:0,-4.81648,-10 0/0:40.9866:9:9:334:0:0:0,-2.70927,-10 0/0:47.0072:11:11:397:0:0:0,-3.31133,-10 0/0:95.1728:27:27:949:0:0:0,-8.12781,-10 0/0:80.1204:22:22:807:0:0:0,-6.62266,-10 0/0:28.9454:5:5:183:0:0:0,-1.50515,-10 0/0:22.9248:3:3:112:0:0:0,-0.90309,-10 0/0:34.966:7:7:266:0:0:0,-2.10721,-10 0/0:37.9763:8:8:287:0:0:0,-2.40824,-10 0/0:95.1728:27:27:994:0:0:0,-8.12781,-10 0/0:99:31:31:1144:0:0:0,-9.33193,-10 0/0:99:38:38:1416:0:0:0,-10,-10 0/0:62.0587:16:16:593:0:0:0,-4.81648,-10 0/0:21.9287:18:17:537:1:38:0,-0.363267,-10 0/0:40.9866:9:9:319:0:0:0,-2.70927,-10 0/0:74.0999:20:20:730:0:0:0,-6.0206,-10 0/0:99:36:36:1331:0:0:0,-10,-10 0/0:37.9763:8:8:286:0:0:0,-2.40824,-10 0/1:99:20:8:302:12:447:-10,0,-10 0/0:43.9969:10:10:372:0:0:0,-3.0103,-10 0/0:71.0896:19:19:708:0:0:0,-5.71957,-10 0/0:71.0896:19:19:682:0:0:0,-5.71957,-10 0/0:80.1204:22:22:800:0:0:0,-6.62266,-10 0/0:53.0278:13:13:463:0:0:0,-3.91339,-10 0/0:56.0381:14:14:531:0:0:0,-4.21442,-10 0/0:74.0999:20:20:702:0:0:0,-6.0206,-10 0/0:99:35:35:1262:0:0:0,-10,-10 0/0:19.9145:2:2:75:0:0:0,-0.60206,-7.125 0/0:28.9454:5:5:190:0:0:0,-1.50515,-10 0/0:43.9969:10:10:360:0:0:0,-3.0103,-10 0/1:0.0531986:15:0:0:15:569:-10,-4.51545,0 0/0:50.0175:12:12:447:0:0:0,-3.61236,-10 0/0:34.966:7:7:256:0:0:0,-2.10721,-10 0/0:62.0587:16:16:564:0:0:0,-4.81648,-10 0/0:68.0793:18:18:678:0:0:0,-5.41854,-10 0/0:47.0072:11:11:389:0:0:0,-3.31133,-10 0/0:68.0793:18:18:651:0:0:0,-5.41854,-10 0/0:89.1508:25:25:921:0:0:0,-7.52575,-10 0/0:62.0587:16:16:597:0:0:0,-4.81648,-10 0/0:65.069:17:17:605:0:0:0,-5.11751,-10 0/0:48.3093:28:27:940:1:38:0,-3.18168,-10 0/0:83.1306:23:23:805:0:0:0,-6.92369,-10 0/0:0.217394:7:6:227:1:16:-0.337888,0,-10 0/0:99:43:43:1587:0:0:0,-10,-10 0/0:77.1101:21:21:726:0:0:0,-6.32163,-10 0/0:50.0175:12:12:403:0:0:0,-3.61236,-10 0/0:99:29:29:1062:0:0:0,-8.72987,-10 0/0:53.0278:13:13:485:0:0:0,-3.91339,-10 0/0:67.457:27:26:947:1:16:0,-5.09645,-10 0/0:50.0175:12:12:433:0:0:0,-3.61236,-10 0/0:47.0072:11:11:412:0:0:0,-3.31133,-10 0/0:99:39:39:1401:0:0:0,-10,-10 0/0:62.0587:16:16:599:0:0:0,-4.81648,-10 0/0:39.3631:17:16:598:1:16:0,-2.28706,-10 0/0:34.966:7:7:262:0:0:0,-2.10721,-10 0/0:62.0587:16:16:572:0:0:0,-4.81648,-10 0/0:37.9763:8:8:271:0:0:0,-2.40824,-10 0/0:99:34:34:1209:0:0:0,-10,-10 0/0:80.1204:22:22:761:0:0:0,-6.62266,-10 0/0:99:32:32:1173:0:0:0,-9.63296,-10 0/0:74.0999:20:20:754:0:0:0,-6.0206,-10 0/0:43.9969:10:10:377:0:0:0,-3.0103,-10 0/0:99:29:29:1078:0:0:0,-8.72987,-10 0/0:77.1101:21:21:719:0:0:0,-6.32163,-10 0/0:37.9763:8:8:284:0:0:0,-2.40824,-10 0/0:99:40:40:1427:0:0:0,-10,-10 0/0:47.0072:11:11:413:0:0:0,-3.31133,-10 0/0:59.0484:15:15:567:0:0:0,-4.51545,-10 0/0:99:35:35:1262:0:0:0,-10,-10 0/0:83.1306:23:23:818:0:0:0,-6.92369,-10 0/0:65.069:17:17:639:0:0:0,-5.11751,-10 0/0:92.1605:26:26:920:0:0:0,-7.82678,-10 0/0:34.966:7:7:216:0:0:0,-2.10721,-10 0/0:68.0793:18:18:670:0:0:0,-5.41854,-10 0/0:53.0278:13:13:464:0:0:0,-3.91339,-10 0/0:25.9351:4:4:147:0:0:0,-1.20412,-10 0/0:56.0381:14:14:495:0:0:0,-4.21442,-10 0/0:99:39:39:1416:0:0:0,-10,-10 0/0:99:29:29:1020:0:0:0,-8.72987,-10 0/0:99:29:29:1051:0:0:0,-8.72987,-10 0/0:74.0999:20:20:709:0:0:0,-6.0206,-10 0/0:92.1605:26:26:903:0:0:0,-7.82678,-10 0/0:25.9351:4:4:152:0:0:0,-1.20412,-10 0/0:20.5955:10:9:324:1:16:0,-0.4103,-10 0/0:53.0278:13:13:446:0:0:0,-3.91339,-10 0/0:25.9351:4:4:152:0:0:0,-1.20412,-10 0/0:47.0072:11:11:414:0:0:0,-3.31133,-10 0/0:59.0484:15:15:535:0:0:0,-4.51545,-10 0/0:47.0072:11:11:390:0:0:0,-3.31133,-10 scaffold_458 14551 . C T 2000.07 . AB=0.340517;ABP=54.2645;AC=9;AF=0.0483871;AN=186;AO=80;CIGAR=1X;DP=2168;DPB=2168;DPRA=1.16575;EPP=6.91895;EPPR=3.42629;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9713;NS=93;NUMALT=1;ODDS=7.9705;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2931;QR=77070;RO=2088;RPP=176.728;RPPR=4238.13;RUN=1;SAF=34;SAP=6.91895;SAR=46;SRF=1019;SRP=5.61024;SRR=1069;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.7522:14:14:503:0:0:0,-4.21442,-10 0/0:52.6801:7:7:266:0:0:0,-2.10721,-10 0/1:99:16:7:260:9:340:-10,0,-10 0/0:82.783:17:17:642:0:0:0,-5.11751,-10 0/0:79.7728:16:16:603:0:0:0,-4.81648,-10 0/0:49.6698:6:6:227:0:0:0,-1.80618,-10 0/1:99:38:29:1062:9:329:-10,0,-10 0/0:99:30:30:1080:0:0:0,-9.0309,-10 0/0:82.783:17:17:616:0:0:0,-5.11751,-10 0/0:52.6801:7:7:266:0:0:0,-2.10721,-10 0/0:55.6904:8:8:295:0:0:0,-2.40824,-10 0/0:52.6801:7:7:218:0:0:0,-2.10721,-10 0/0:99:29:29:1077:0:0:0,-8.72987,-10 0/0:99:46:46:1688:0:0:0,-10,-10 0/1:99:38:26:984:12:421:-10,0,-10 0/1:99:20:15:565:5:190:-10,0,-10 0/0:99:26:26:967:0:0:0,-7.82678,-10 0/0:73.7522:14:14:519:0:0:0,-4.21442,-10 0/0:99:25:25:916:0:0:0,-7.52575,-10 0/0:99:52:52:1921:0:0:0,-10,-10 0/0:67.7316:12:12:454:0:0:0,-3.61236,-10 0/0:99:42:42:1530:0:0:0,-10,-10 0/0:52.6801:7:7:266:0:0:0,-2.10721,-10 0/0:99:30:30:1090:0:0:0,-9.0309,-10 0/0:94.8231:21:21:797:0:0:0,-6.32163,-10 0/0:97.8321:22:22:802:0:0:0,-6.62266,-10 0/0:97.8321:22:22:829:0:0:0,-6.62266,-10 0/0:99:23:23:859:0:0:0,-6.92369,-10 0/0:99:32:32:1176:0:0:0,-9.63296,-10 0/0:99:28:28:1044:0:0:0,-8.42884,-10 0/0:37.6286:2:2:76:0:0:0,-0.60206,-7.22 0/0:70.7419:13:13:484:0:0:0,-3.91339,-10 0/1:99:25:12:416:13:466:-10,0,-10 0/0:73.7522:14:14:531:0:0:0,-4.21442,-10 0/0:97.8321:22:22:828:0:0:0,-6.62266,-10 0/0:52.6801:7:7:216:0:0:0,-2.10721,-10 0/0:97.8321:22:22:817:0:0:0,-6.62266,-10 0/0:99:36:36:1323:0:0:0,-10,-10 0/0:91.8134:20:20:732:0:0:0,-6.0206,-10 0/0:85.7933:18:18:631:0:0:0,-5.41854,-10 0/0:99:44:44:1646:0:0:0,-10,-10 0/0:99:28:28:997:0:0:0,-8.42884,-10 0/0:99:23:23:844:0:0:0,-6.92369,-10 0/0:99:39:39:1456:0:0:0,-10,-10 0/0:99:31:31:1160:0:0:0,-9.33193,-10 0/0:85.7933:18:18:666:0:0:0,-5.41854,-10 0/0:99:62:62:2270:0:0:0,-10,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:79.7728:16:16:592:0:0:0,-4.81648,-10 0/0:99:47:47:1696:0:0:0,-10,-10 0/0:88.8034:19:19:708:0:0:0,-5.71957,-10 0/0:99:31:31:1168:0:0:0,-9.33193,-10 0/0:70.7419:13:13:467:0:0:0,-3.91339,-10 0/0:64.7213:11:11:408:0:0:0,-3.31133,-10 0/0:99:56:56:2084:0:0:0,-10,-10 0/0:73.7522:14:14:528:0:0:0,-4.21442,-10 0/0:94.8231:21:21:792:0:0:0,-6.32163,-10 0/0:52.6801:7:7:266:0:0:0,-2.10721,-10 0/0:99:26:26:983:0:0:0,-7.82678,-10 0/0:79.7728:16:16:607:0:0:0,-4.81648,-10 0/0:99:31:31:1136:0:0:0,-9.33193,-10 0/0:99:25:25:945:0:0:0,-7.52575,-10 0/1:99:35:24:866:11:413:-10,0,-10 0/0:86.1174:35:34:1230:1:38:0,-5.19198,-10 0/1:89.2131:10:6:228:4:152:-10,0,-10 0/0:99:34:34:1271:0:0:0,-10,-10 0/0:70.7419:13:13:486:0:0:0,-3.91339,-10 0/0:73.7522:14:14:514:0:0:0,-4.21442,-10 0/0:99:51:51:1909:0:0:0,-10,-10 0/0:76.7625:15:15:562:0:0:0,-4.51545,-10 0/0:99:33:33:1249:0:0:0,-9.93399,-10 0/0:99:34:34:1236:0:0:0,-10,-10 0/0:99:31:31:1161:0:0:0,-9.33193,-10 0/0:94.8231:21:21:773:0:0:0,-6.32163,-10 0/0:99:28:28:1055:0:0:0,-8.42884,-10 0/0:88.8034:19:19:705:0:0:0,-5.71957,-10 0/0:85.7933:18:18:622:0:0:0,-5.41854,-10 0/0:73.7522:14:14:479:0:0:0,-4.21442,-10 0/0:64.7213:11:11:383:0:0:0,-3.31133,-10 0/1:99:13:8:297:5:186:-10,0,-10 0/0:99:43:43:1580:0:0:0,-10,-10 0/1:99:37:26:957:11:396:-10,0,-10 0/0:99:35:35:1299:0:0:0,-10,-10 0/0:99:31:31:1137:0:0:0,-9.33193,-10 0/0:99:28:28:1050:0:0:0,-8.42884,-10 0/0:52.6801:7:7:263:0:0:0,-2.10721,-10 0/0:94.8231:21:21:756:0:0:0,-6.32163,-10 0/0:82.783:17:17:644:0:0:0,-5.11751,-10 0/0:40.6389:3:3:111:0:0:0,-0.90309,-10 0/0:91.8134:20:20:756:0:0:0,-6.0206,-10 0/0:91.8134:20:20:754:0:0:0,-6.0206,-10 0/0:97.8321:22:22:783:0:0:0,-6.62266,-10 scaffold_458 186235 . G A 3063.29 . AB=0.758621;ABP=36.7056;AC=9;AF=0.048913;AN=184;AO=122;CIGAR=1X;DP=2154;DPB=2154;DPRA=0.83468;EPP=6.49889;EPPR=4.39525;GTI=1;LEN=1;MEANALT=1;MQM=59.5328;MQMR=59.8553;NS=92;NUMALT=1;ODDS=2.61276;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4311;QR=73278;RO=2032;RPP=267.93;RPPR=4406.76;RUN=1;SAF=54;SAP=6.49889;SAR=68;SRF=997;SRP=4.55341;SRR=1035;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:80.0101:25:25:873:0:0:0,-7.52575,-10 0/0:34.8557:10:10:323:0:0:0,-3.0103,-10 0/0:95.0601:30:30:1024:0:0:0,-9.0309,-10 1/1:33.1874:23:0:0:23:826:-10,-6.92369,0 0/0:70.9793:22:22:780:0:0:0,-6.62266,-10 0/0:43.8866:13:13:470:0:0:0,-3.91339,-10 0/0:99:52:52:1890:0:0:0,-10,-10 0/0:89.0407:28:28:1010:0:0:0,-8.42884,-10 0/0:28.8351:8:8:280:0:0:0,-2.40824,-10 0/0:25.8248:7:7:248:0:0:0,-2.10721,-10 0/0:37.866:11:11:414:0:0:0,-3.31133,-10 0/0:28.8351:8:8:273:0:0:0,-2.40824,-10 0/0:99:45:45:1658:0:0:0,-10,-10 0/0:95.0601:30:30:1078:0:0:0,-9.0309,-10 0/0:99:33:33:1157:0:0:0,-9.93399,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:99:32:32:1183:0:0:0,-9.63296,-10 0/0:23.2911:14:13:488:1:16:0,-1.46829,-10 0/0:70.9793:22:22:826:0:0:0,-6.62266,-10 0/0:99:40:40:1405:0:0:0,-10,-10 0/0:73.9896:23:23:844:0:0:0,-6.92369,-10 0/0:99:34:34:1274:0:0:0,-10,-10 0/0:52.9175:16:16:590:0:0:0,-4.81648,-10 0/0:95.0601:30:30:1079:0:0:0,-9.0309,-10 0/0:61.9484:19:19:640:0:0:0,-5.71957,-10 0/0:80.0101:25:25:901:0:0:0,-7.52575,-10 0/0:70.9793:22:22:825:0:0:0,-6.62266,-10 0/0:55.9278:17:17:622:0:0:0,-5.11751,-10 0/0:46.8969:14:14:522:0:0:0,-4.21442,-10 0/0:99:40:40:1441:0:0:0,-10,-10 0/0:28.8351:8:8:301:0:0:0,-2.40824,-10 0/0:28.8351:8:8:296:0:0:0,-2.40824,-10 0/0:49.9072:15:15:522:0:0:0,-4.51545,-10 1/1:24.1565:20:0:0:20:727:-10,-6.0206,0 0/0:73.9896:23:23:851:0:0:0,-6.92369,-10 0/0:12.7112:10:9:333:1:16:0,-0.4103,-10 0/0:37.866:11:11:405:0:0:0,-3.31133,-10 0/0:80.0101:25:25:890:0:0:0,-7.52575,-10 0/0:49.9072:15:15:564:0:0:0,-4.51545,-10 0/0:89.0407:28:28:1042:0:0:0,-8.42884,-10 0/1:99:29:13:481:16:558:-10,0,-10 0/0:61.9484:19:19:711:0:0:0,-5.71957,-10 0/0:58.9381:18:18:608:0:0:0,-5.41854,-10 0/0:99:39:39:1443:0:0:0,-10,-10 0/0:99:33:33:1194:0:0:0,-9.93399,-10 0/0:49.9072:15:15:533:0:0:0,-4.51545,-10 0/0:99:59:59:2100:0:0:0,-10,-10 0/0:99:35:35:1290:0:0:0,-10,-10 0/0:46.8969:14:14:517:0:0:0,-4.21442,-10 0/0:99:44:44:1504:0:0:0,-10,-10 0/0:43.8866:13:13:476:0:0:0,-3.91339,-10 0/0:99:46:46:1701:0:0:0,-10,-10 0/0:40.8763:12:12:428:0:0:0,-3.61236,-10 0/0:25.8248:7:7:241:0:0:0,-2.10721,-10 0/0:99:50:50:1780:0:0:0,-10,-10 0/1:0.260436:14:0:0:14:518:-10,-4.21442,0 0/0:83.0204:26:26:934:0:0:0,-7.82678,-10 0/0:40.8763:12:12:398:0:0:0,-3.61236,-10 0/0:86.0306:27:27:897:0:0:0,-8.12781,-10 0/0:34.8557:10:10:378:0:0:0,-3.0103,-10 0/0:99:35:35:1262:0:0:0,-10,-10 0/0:55.9278:17:17:633:0:0:0,-5.11751,-10 0/0:99:42:42:1534:0:0:0,-10,-10 0/0:76.9999:24:24:904:0:0:0,-7.22472,-10 0/1:55.9386:15:1:38:14:510:-10,0,-0.460641 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:73.9896:23:23:843:0:0:0,-6.92369,-10 0/0:34.2408:18:17:592:1:16:0,-2.56327,-10 0/0:99:32:32:1204:0:0:0,-9.63296,-10 0/0:52.9175:16:16:569:0:0:0,-4.81648,-10 0/0:86.0306:27:27:990:0:0:0,-8.12781,-10 0/0:99:43:43:1591:0:0:0,-10,-10 0/0:99:35:35:1230:0:0:0,-10,-10 0/0:61.9484:19:19:660:0:0:0,-5.71957,-10 0/0:99:33:33:1162:0:0:0,-9.93399,-10 0/0:40.8763:12:12:430:0:0:0,-3.61236,-10 0/0:52.9175:16:16:577:0:0:0,-4.81648,-10 0/0:49.9072:15:15:566:0:0:0,-4.51545,-10 0/0:16.7939:4:4:152:0:0:0,-1.20412,-10 0/0:49.9072:15:15:512:0:0:0,-4.51545,-10 0/0:99:40:40:1455:0:0:0,-10,-10 0/0:99:32:32:1102:0:0:0,-9.63296,-10 0/0:58.9381:18:18:655:0:0:0,-5.41854,-10 0/0:99:32:32:1158:0:0:0,-9.63296,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:13.7836:3:3:104:0:0:0,-0.90309,-9.70667 1/1:57.2698:31:0:0:31:1108:-10,-9.33193,0 0/0:58.9381:18:18:645:0:0:0,-5.41854,-10 0/0:19.8042:5:5:165:0:0:0,-1.50515,-10 0/0:52.9175:16:16:549:0:0:0,-4.81648,-10 0/0:53.8863:25:24:868:1:16:0,-4.52781,-10 0/0:58.9381:18:18:667:0:0:0,-5.41854,-10 scaffold_458 264295 . G A 209.757 . AB=0.692308;ABP=7.18621;AC=1;AF=0.00555556;AN=180;AO=11;CIGAR=1X;DP=1306;DPB=1306;DPRA=0.939921;EPP=3.20771;EPPR=6.25912;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9961;NS=90;NUMALT=1;ODDS=3.09854;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=403;QR=46537;RO=1294;RPP=26.8965;RPPR=2804.22;RUN=1;SAF=5;SAP=3.20771;SAR=6;SRF=668;SRP=5.97048;SRR=626;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:48.2177:6:6:228:0:0:0,-1.80618,-10 0/0:33.1662:1:1:38:0:0:0,-0.30103,-3.8 0/0:54.2383:8:8:275:0:0:0,-2.40824,-10 0/0:78.3206:16:16:569:0:0:0,-4.81648,-10 0/0:84.3412:18:18:643:0:0:0,-5.41854,-10 0/0:36.1765:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:41:41:1510:0:0:0,-10,-10 0/0:69.2898:13:13:440:0:0:0,-3.91339,-10 0/0:66.2795:12:12:451:0:0:0,-3.61236,-10 0/0:33.1662:1:1:38:0:0:0,-0.30103,-3.8 0/0:48.2177:6:6:213:0:0:0,-1.80618,-10 0/0:51.228:7:7:256:0:0:0,-2.10721,-10 0/0:51.7721:18:17:595:1:23:0,-1.86327,-10 0/0:81.3309:17:17:639:0:0:0,-5.11751,-10 0/0:90.362:20:20:723:0:0:0,-6.0206,-10 0/0:57.2486:9:9:331:0:0:0,-2.70927,-10 0/0:99:24:24:863:0:0:0,-7.22472,-10 0/0:51.228:7:7:266:0:0:0,-2.10721,-10 0/0:63.2692:11:11:388:0:0:0,-3.31133,-10 0/0:99:29:29:1048:0:0:0,-8.72987,-10 0/1:99:13:4:106:9:342:-10,0,-8.74592 0/0:75.3104:15:15:517:0:0:0,-4.51545,-10 0/0:39.1868:3:3:114:0:0:0,-0.90309,-10 0/0:75.3104:15:15:540:0:0:0,-4.51545,-10 0/0:90.362:20:20:733:0:0:0,-6.0206,-10 0/0:93.3714:21:21:731:0:0:0,-6.32163,-10 0/0:54.2383:8:8:287:0:0:0,-2.40824,-10 0/0:0.191173:10:9:325:1:38:-1.7897,0,-10 0/0:54.2383:8:8:250:0:0:0,-2.40824,-10 0/0:99:33:33:1186:0:0:0,-9.93399,-10 0/0:39.1868:3:3:114:0:0:0,-0.90309,-10 0/0:60.2589:10:10:377:0:0:0,-3.0103,-10 0/0:66.2795:12:12:450:0:0:0,-3.61236,-10 0/0:48.2177:6:6:204:0:0:0,-1.80618,-10 0/0:57.2486:9:9:339:0:0:0,-2.70927,-10 0/0:39.1868:3:3:109:0:0:0,-0.90309,-10 0/0:63.2692:11:11:363:0:0:0,-3.31133,-10 0/0:60.2589:10:10:376:0:0:0,-3.0103,-10 0/0:66.2795:12:12:389:0:0:0,-3.61236,-10 0/0:60.2589:10:10:363:0:0:0,-3.0103,-10 0/0:99:24:24:839:0:0:0,-7.22472,-10 0/0:66.2795:12:12:442:0:0:0,-3.61236,-10 0/0:57.2486:9:9:314:0:0:0,-2.70927,-10 0/0:81.3309:17:17:611:0:0:0,-5.11751,-10 0/0:93.3714:21:21:760:0:0:0,-6.32163,-10 0/0:72.3001:14:14:525:0:0:0,-4.21442,-10 0/0:99:28:28:1022:0:0:0,-8.42884,-10 0/0:84.3412:18:18:674:0:0:0,-5.41854,-10 0/0:51.228:7:7:218:0:0:0,-2.10721,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/0:69.2898:13:13:482:0:0:0,-3.91339,-10 0/0:99:40:40:1352:0:0:0,-10,-10 0/0:69.2898:13:13:483:0:0:0,-3.91339,-10 0/0:48.2177:6:6:180:0:0:0,-1.80618,-10 0/0:96.3809:22:22:790:0:0:0,-6.62266,-10 0/0:66.2795:12:12:433:0:0:0,-3.61236,-10 0/0:84.3412:18:18:667:0:0:0,-5.41854,-10 0/0:33.1662:1:1:38:0:0:0,-0.30103,-3.8 0/0:84.3412:18:18:635:0:0:0,-5.41854,-10 0/0:72.3001:14:14:504:0:0:0,-4.21442,-10 0/0:99:24:24:860:0:0:0,-7.22472,-10 0/0:90.362:20:20:726:0:0:0,-6.0206,-10 0/0:99:24:24:836:0:0:0,-7.22472,-10 0/0:78.3206:16:16:598:0:0:0,-4.81648,-10 0/0:84.3412:18:18:660:0:0:0,-5.41854,-10 0/0:84.3412:18:18:660:0:0:0,-5.41854,-10 0/0:72.3001:14:14:500:0:0:0,-4.21442,-10 0/0:60.2589:11:10:380:0:0:0,-3.0103,-10 0/0:99:32:32:1087:0:0:0,-9.63296,-10 0/0:48.2177:6:6:203:0:0:0,-1.80618,-10 0/0:78.3206:16:16:572:0:0:0,-4.81648,-10 0/0:99:23:23:845:0:0:0,-6.92369,-10 0/0:93.3714:21:21:763:0:0:0,-6.32163,-10 0/0:45.2074:5:5:190:0:0:0,-1.50515,-10 0/0:99:28:28:1005:0:0:0,-8.42884,-10 0/0:72.3001:14:14:527:0:0:0,-4.21442,-10 0/0:48.2177:6:6:207:0:0:0,-1.80618,-10 0/0:54.2383:8:8:304:0:0:0,-2.40824,-10 0/0:51.228:7:7:266:0:0:0,-2.10721,-10 0/0:45.2074:5:5:183:0:0:0,-1.50515,-10 0/0:99:24:24:877:0:0:0,-7.22472,-10 0/0:96.3809:22:22:793:0:0:0,-6.62266,-10 0/0:78.3206:16:16:555:0:0:0,-4.81648,-10 0/0:84.3412:18:18:655:0:0:0,-5.41854,-10 0/0:96.3809:22:22:832:0:0:0,-6.62266,-10 .:.:.:.:.:.:.:. 0/0:72.3001:14:14:480:0:0:0,-4.21442,-10 0/0:84.3412:18:18:642:0:0:0,-5.41854,-10 .:.:.:.:.:.:.:. 0/0:42.1971:4:4:148:0:0:0,-1.20412,-10 0/0:78.3206:16:16:603:0:0:0,-4.81648,-10 0/0:42.1971:4:4:151:0:0:0,-1.20412,-10 scaffold_458 264298 . G C 5251.81 . AB=0.571429;ABP=10.4553;AC=21;AF=0.116667;AN=180;AO=199;CIGAR=1X;DP=1303;DPB=1303;DPRA=1.39071;EPP=3.02121;EPPR=5.86085;GTI=3;LEN=1;MEANALT=1;MQM=60;MQMR=59.9955;NS=90;NUMALT=1;ODDS=0.176786;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7140;QR=39377;RO=1100;RPP=435.133;RPPR=2391.63;RUN=1;SAF=100;SAP=3.02121;SAR=99;SRF=569;SRP=5.86085;SRR=531;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:22.9137:6:6:228:0:0:0,-1.80618,-10 0/1:0.605028:1:1:38:0:0:0,-0.30103,-3.8 0/0:28.9343:8:8:297:0:0:0,-2.40824,-10 0/0:53.0167:16:16:581:0:0:0,-4.81648,-10 1/1:46.4305:18:0:0:18:642:-10,-5.41854,0 0/0:10.8725:2:2:76:0:0:0,-0.60206,-7.22 0/1:99:41:19:661:22:807:-10,0,-10 0/0:43.9858:13:13:433:0:0:0,-3.91339,-10 0/0:40.9755:12:12:454:0:0:0,-3.61236,-10 0/1:0.605028:1:1:38:0:0:0,-0.30103,-3.8 0/0:22.9137:6:6:200:0:0:0,-1.80618,-10 0/0:25.924:7:7:239:0:0:0,-2.10721,-10 0/1:99:18:8:300:10:350:-10,0,-10 0/0:56.027:17:17:596:0:0:0,-5.11751,-10 0/0:65.0579:20:20:688:0:0:0,-6.0206,-10 0/0:31.9446:9:9:329:0:0:0,-2.70927,-10 0/1:99:24:15:545:9:316:-10,0,-10 0/0:25.924:7:7:244:0:0:0,-2.10721,-10 0/0:37.9652:11:11:344:0:0:0,-3.31133,-10 0/0:89.1404:28:28:1008:0:0:0,-8.42884,-10 0/0:43.9858:13:13:463:0:0:0,-3.91339,-10 0/0:50.0064:15:15:519:0:0:0,-4.51545,-10 0/0:13.8828:3:3:114:0:0:0,-0.90309,-10 0/1:99:15:9:327:6:198:-10,0,-10 0/0:65.0579:20:20:715:0:0:0,-6.0206,-10 0/0:68.0682:21:21:790:0:0:0,-6.32163,-10 0/0:28.9343:8:8:299:0:0:0,-2.40824,-10 0/0:34.9549:10:10:355:0:0:0,-3.0103,-10 0/0:25.924:8:7:226:0:0:0,-2.10721,-10 0/0:99:33:33:1168:0:0:0,-9.93399,-10 0/0:13.8828:3:3:114:0:0:0,-0.90309,-10 0/0:34.9549:10:10:371:0:0:0,-3.0103,-10 0/0:40.9755:12:12:452:0:0:0,-3.61236,-10 0/0:19.9034:6:5:160:0:0:0,-1.50515,-10 0/0:31.9446:9:9:323:0:0:0,-2.70927,-10 0/0:13.8828:3:3:113:0:0:0,-0.90309,-10 0/0:37.9652:11:11:399:0:0:0,-3.31133,-10 0/0:34.9549:10:10:371:0:0:0,-3.0103,-10 0/0:37.9652:12:11:364:0:0:0,-3.31133,-10 0/1:99:10:4:149:6:206:-10,0,-10 0/0:77.0991:24:24:857:0:0:0,-7.22472,-10 0/0:40.9755:12:12:448:0:0:0,-3.61236,-10 0/0:31.9446:9:9:327:0:0:0,-2.70927,-10 0/1:99:17:7:253:10:345:-10,0,-10 0/0:68.0682:21:21:703:0:0:0,-6.32163,-10 0/0:46.9961:14:14:490:0:0:0,-4.21442,-10 0/0:89.1404:28:28:1005:0:0:0,-8.42884,-10 0/0:59.0373:18:18:643:0:0:0,-5.41854,-10 0/0:25.924:7:7:251:0:0:0,-2.10721,-10 0/0:86.1296:27:27:948:0:0:0,-8.12781,-10 0/0:43.9858:13:13:468:0:0:0,-3.91339,-10 0/0:99:40:40:1405:0:0:0,-10,-10 0/0:43.9858:13:13:470:0:0:0,-3.91339,-10 0/0:22.9137:6:6:198:0:0:0,-1.80618,-10 0/0:71.0785:22:22:745:0:0:0,-6.62266,-10 0/0:40.9755:12:12:427:0:0:0,-3.61236,-10 0/1:99:18:5:190:13:474:-10,0,-10 0/0:7.8622:1:1:38:0:0:0,-0.30103,-3.8 0/0:59.0373:18:18:630:0:0:0,-5.41854,-10 0/0:46.9961:14:14:519:0:0:0,-4.21442,-10 0/0:77.0991:24:24:853:0:0:0,-7.22472,-10 0/0:62.0476:19:19:659:0:0:0,-5.71957,-10 0/0:77.0991:24:24:841:0:0:0,-7.22472,-10 0/0:53.0167:16:16:566:0:0:0,-4.81648,-10 0/0:59.0373:18:18:676:0:0:0,-5.41854,-10 0/0:59.0373:18:18:658:0:0:0,-5.41854,-10 0/0:46.9961:14:14:528:0:0:0,-4.21442,-10 0/0:37.9652:11:11:392:0:0:0,-3.31133,-10 0/0:98.1651:32:31:1150:0:0:0,-9.33193,-10 0/0:22.9137:6:6:214:0:0:0,-1.80618,-10 1/1:40.4099:16:0:0:16:575:-10,-4.81648,0 1/1:61.482:23:0:0:23:834:-10,-6.92369,0 0/1:99:20:5:185:15:549:-10,0,-10 0/1:0.309483:5:0:0:5:188:-10,-1.50515,0 1/1:76.5334:28:0:0:28:1016:-10,-8.42884,0 0/0:46.9961:14:14:515:0:0:0,-4.21442,-10 0/0:22.9137:6:6:220:0:0:0,-1.80618,-10 0/0:28.9343:8:8:296:0:0:0,-2.40824,-10 0/0:25.924:7:7:266:0:0:0,-2.10721,-10 0/0:19.9034:5:5:143:0:0:0,-1.50515,-10 0/0:77.0991:24:24:901:0:0:0,-7.22472,-10 0/0:71.0785:22:22:809:0:0:0,-6.62266,-10 0/0:53.0167:16:16:533:0:0:0,-4.81648,-10 0/0:59.0373:18:18:664:0:0:0,-5.41854,-10 0/0:71.0785:22:22:815:0:0:0,-6.62266,-10 .:.:.:.:.:.:.:. 0/0:46.9961:14:14:496:0:0:0,-4.21442,-10 1/1:46.4305:18:0:0:18:640:-10,-5.41854,0 .:.:.:.:.:.:.:. 0/0:16.8931:4:4:139:0:0:0,-1.20412,-10 0/0:53.0167:16:16:600:0:0:0,-4.81648,-10 0/0:16.8931:4:4:152:0:0:0,-1.20412,-10 scaffold_458 264304 . C T 1415.38 . AB=0.536585;ABP=3.48696;AC=6;AF=0.0333333;AN=180;AO=59;CIGAR=1X;DP=1301;DPB=1301;DPRA=1.63732;EPP=3.0471;EPPR=5.03141;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.996;NS=90;NUMALT=1;ODDS=1.10674;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2100;QR=45039;RO=1242;RPP=131.127;RPPR=2699.98;RUN=1;SAF=30;SAP=3.0471;SAR=29;SRF=638;SRP=5.03141;SRR=604;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:24.6972:6:6:215:0:0:0,-1.80618,-10 0/1:0.523081:1:1:38:0:0:0,-0.30103,-3.8 0/0:30.7178:8:8:287:0:0:0,-2.40824,-10 0/0:54.8002:16:16:570:0:0:0,-4.81648,-10 1/1:16.7542:18:0:0:18:637:-10,-5.41854,0 0/0:12.656:2:2:76:0:0:0,-0.60206,-7.22 0/1:99:41:19:654:22:785:-10,0,-10 0/0:42.759:12:12:451:0:0:0,-3.61236,-10 0/0:42.759:12:12:440:0:0:0,-3.61236,-10 0/0:9.64566:1:1:37:0:0:0,-0.30103,-3.7 0/0:24.6972:6:6:179:0:0:0,-1.80618,-10 0/0:27.7075:7:7:260:0:0:0,-2.10721,-10 0/0:60.8208:18:18:650:0:0:0,-5.41854,-10 0/0:57.8105:17:17:620:0:0:0,-5.11751,-10 0/0:66.8414:20:20:708:0:0:0,-6.0206,-10 0/0:33.7281:9:9:336:0:0:0,-2.70927,-10 0/0:78.8825:24:24:883:0:0:0,-7.22472,-10 0/0:27.7075:7:7:250:0:0:0,-2.10721,-10 0/0:39.7487:11:11:375:0:0:0,-3.31133,-10 0/0:90.9233:28:28:1028:0:0:0,-8.42884,-10 0/0:45.7693:13:13:456:0:0:0,-3.91339,-10 0/0:51.7899:15:15:542:0:0:0,-4.51545,-10 0/0:15.6663:3:3:110:0:0:0,-0.90309,-10 0/0:51.7899:15:15:520:0:0:0,-4.51545,-10 0/0:66.8414:20:20:743:0:0:0,-6.0206,-10 0/0:69.8517:21:21:758:0:0:0,-6.32163,-10 0/0:30.7178:8:8:299:0:0:0,-2.40824,-10 0/0:36.7384:10:10:379:0:0:0,-3.0103,-10 0/0:30.7178:8:8:223:0:0:0,-2.40824,-10 0/0:99:33:33:1195:0:0:0,-9.93399,-10 0/0:15.6663:3:3:112:0:0:0,-0.90309,-10 0/0:36.7384:10:10:380:0:0:0,-3.0103,-10 0/0:42.759:12:12:434:0:0:0,-3.61236,-10 0/0:24.6972:6:6:203:0:0:0,-1.80618,-10 0/0:33.7281:9:9:340:0:0:0,-2.70927,-10 0/0:15.6663:3:3:109:0:0:0,-0.90309,-10 0/0:39.7487:11:11:359:0:0:0,-3.31133,-10 0/0:36.7384:10:10:380:0:0:0,-3.0103,-10 0/0:42.759:12:12:426:0:0:0,-3.61236,-10 0/0:36.7384:10:10:368:0:0:0,-3.0103,-10 0/0:75.8722:23:23:839:0:0:0,-6.92369,-10 0/0:42.759:12:12:450:0:0:0,-3.61236,-10 0/0:33.7281:9:9:335:0:0:0,-2.70927,-10 0/0:57.8105:17:17:617:0:0:0,-5.11751,-10 0/0:69.8517:21:21:773:0:0:0,-6.32163,-10 0/0:48.7796:14:14:504:0:0:0,-4.21442,-10 0/0:90.9233:28:28:969:0:0:0,-8.42884,-10 0/0:60.8208:18:18:657:0:0:0,-5.41854,-10 0/0:27.7075:7:7:261:0:0:0,-2.10721,-10 0/0:87.9132:27:27:985:0:0:0,-8.12781,-10 0/0:45.7693:13:13:469:0:0:0,-3.91339,-10 0/0:99:40:40:1437:0:0:0,-10,-10 0/0:45.7693:13:13:483:0:0:0,-3.91339,-10 0/0:24.6972:6:6:204:0:0:0,-1.80618,-10 0/0:72.862:22:22:777:0:0:0,-6.62266,-10 0/0:42.759:12:12:451:0:0:0,-3.61236,-10 0/0:60.8208:18:18:672:0:0:0,-5.41854,-10 0/0:9.64566:1:1:38:0:0:0,-0.30103,-3.8 0/0:60.8208:18:18:653:0:0:0,-5.41854,-10 0/0:48.7796:14:14:487:0:0:0,-4.21442,-10 0/0:78.8825:24:24:864:0:0:0,-7.22472,-10 0/0:63.8311:19:19:709:0:0:0,-5.71957,-10 0/0:78.8825:24:24:785:0:0:0,-7.22472,-10 0/0:54.8002:16:16:574:0:0:0,-4.81648,-10 0/0:60.8208:18:18:669:0:0:0,-5.41854,-10 0/0:60.8208:18:18:665:0:0:0,-5.41854,-10 0/0:48.7796:14:14:529:0:0:0,-4.21442,-10 0/0:39.7487:11:11:393:0:0:0,-3.31133,-10 0/0:99:32:32:1161:0:0:0,-9.63296,-10 0/0:24.6972:6:6:214:0:0:0,-1.80618,-10 0/0:54.8002:16:16:605:0:0:0,-4.81648,-10 0/0:75.8722:23:23:846:0:0:0,-6.92369,-10 0/0:66.8414:20:20:727:0:0:0,-6.0206,-10 0/0:21.6869:5:5:187:0:0:0,-1.50515,-10 0/0:90.9233:28:28:1019:0:0:0,-8.42884,-10 0/0:48.7796:14:14:523:0:0:0,-4.21442,-10 0/0:24.6972:6:6:228:0:0:0,-1.80618,-10 0/0:30.7178:8:8:293:0:0:0,-2.40824,-10 0/0:27.7075:7:7:266:0:0:0,-2.10721,-10 0/0:21.6869:5:5:187:0:0:0,-1.50515,-10 0/0:78.8825:24:24:896:0:0:0,-7.22472,-10 0/0:72.862:22:22:813:0:0:0,-6.62266,-10 0/0:11.2883:16:15:547:1:35:0,-0.11236,-10 0/0:60.8208:18:18:665:0:0:0,-5.41854,-10 0/0:72.862:22:22:827:0:0:0,-6.62266,-10 .:.:.:.:.:.:.:. 0/0:48.7796:14:14:487:0:0:0,-4.21442,-10 1/1:16.7542:18:0:0:18:643:-10,-5.41854,0 .:.:.:.:.:.:.:. 0/0:18.6766:4:4:148:0:0:0,-1.20412,-10 0/0:54.8002:16:16:607:0:0:0,-4.81648,-10 0/0:18.6766:4:4:151:0:0:0,-1.20412,-10 scaffold_458 275197 . C T 3301.16 . AB=0.706897;ABP=24.5753;AC=9;AF=0.048913;AN=184;AO=130;CIGAR=1X;DP=2603;DPB=2603;DPRA=1.15015;EPP=3.0103;EPPR=7.44024;GTI=2;LEN=1;MEANALT=1.08333;MQM=59.6231;MQMR=59.9551;NS=92;NUMALT=1;ODDS=1.03062;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=4679;QR=89353;RO=2471;RPP=285.302;RPPR=5368.72;RUN=1;SAF=65;SAP=3.0103;SAR=65;SRF=1271;SRP=7.44024;SRR=1200;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:73.4874:20:20:729:0:0:0,-6.0206,-10 0/0:55.4256:14:14:510:0:0:0,-4.21442,-10 0/0:99:32:31:1146:0:0:0,-9.33193,-10 0/0:97.567:28:28:1011:0:0:0,-8.42884,-10 0/0:85.5284:24:24:890:0:0:0,-7.22472,-10 0/0:55.4256:14:14:515:0:0:0,-4.21442,-10 0/0:99:50:50:1818:0:0:0,-10,-10 0/0:99:39:38:1368:1:16:0,-8.54911,-10 0/0:61.4462:16:16:562:0:0:0,-4.81648,-10 0/0:25.3226:4:4:148:0:0:0,-1.20412,-10 0/0:55.4256:14:14:496:0:0:0,-4.21442,-10 0/0:43.3844:10:10:368:0:0:0,-3.0103,-10 0/0:99:43:43:1583:0:0:0,-10,-10 0/0:99:40:40:1440:0:0:0,-10,-10 0/0:99:54:54:1930:0:0:0,-10,-10 0/0:80.9742:32:31:1157:1:16:0,-6.52781,-10 0/0:99:35:35:1260:0:0:0,-10,-10 0/0:46.3947:11:11:408:0:0:0,-3.31133,-10 0/0:99:35:35:1215:0:0:0,-10,-10 0/0:99:40:40:1366:0:0:0,-10,-10 0/0:76.4977:21:21:748:0:0:0,-6.32163,-10 0/0:99:49:49:1792:0:0:0,-10,-10 0/0:70.4771:19:19:693:0:0:0,-5.71957,-10 0/0:88.5386:25:25:937:0:0:0,-7.52575,-10 0/0:94.5581:27:27:978:0:0:0,-8.12781,-10 0/0:99:36:36:1322:0:0:0,-10,-10 0/0:82.5182:23:23:842:0:0:0,-6.92369,-10 0/0:55.4256:14:14:504:0:0:0,-4.21442,-10 0/0:73.4874:20:20:739:0:0:0,-6.0206,-10 0/0:99:60:59:2169:1:16:0,-10,-10 0/0:61.4462:16:16:572:0:0:0,-4.81648,-10 0/0:52.4153:13:13:439:0:0:0,-3.91339,-10 0/0:94.5581:27:27:947:0:0:0,-8.12781,-10 0/0:55.4256:14:14:507:0:0:0,-4.21442,-10 0/0:94.5581:27:27:984:0:0:0,-8.12781,-10 0/0:55.4256:14:14:507:0:0:0,-4.21442,-10 0/0:52.4153:13:13:463:0:0:0,-3.91339,-10 0/0:99:48:47:1713:1:35:0,-9.2682,-10 0/0:85.5284:24:24:865:0:0:0,-7.22472,-10 0/0:97.567:28:28:1025:0:0:0,-8.42884,-10 0/0:99:44:44:1618:0:0:0,-10,-10 0/0:82.5182:23:23:815:0:0:0,-6.92369,-10 0/0:67.8918:35:34:1221:1:38:0,-5.19198,-10 0/0:99:62:62:2156:0:0:0,-10,-10 0/0:94.5581:27:27:972:0:0:0,-8.12781,-10 0/0:94.5581:27:27:1000:0:0:0,-8.12781,-10 0/0:99:65:65:2331:0:0:0,-10,-10 0/0:99:31:31:1140:0:0:0,-9.33193,-10 0/0:70.4771:19:19:670:0:0:0,-5.71957,-10 0/0:99:43:43:1547:0:0:0,-10,-10 0/0:76.4977:21:21:740:0:0:0,-6.32163,-10 0/0:99:39:39:1349:0:0:0,-10,-10 0/0:85.5284:24:24:874:0:0:0,-7.22472,-10 0/0:73.4874:20:20:732:0:0:0,-6.0206,-10 0/0:99:65:65:2247:0:0:0,-10,-10 0/0:82.5182:23:23:854:0:0:0,-6.92369,-10 0/0:94.5581:27:27:988:0:0:0,-8.12781,-10 0/0:55.4256:14:14:485:0:0:0,-4.21442,-10 0/0:73.4874:20:20:733:0:0:0,-6.0206,-10 0/0:82.5182:23:23:863:0:0:0,-6.92369,-10 0/0:99:47:47:1764:0:0:0,-10,-10 0/0:68.2606:28:26:936:1:16:0,-5.25645,-10 0/0:99:57:57:2059:0:0:0,-10,-10 0/0:99:32:32:1111:0:0:0,-9.63296,-10 0/0:61.4462:16:16:599:0:0:0,-4.81648,-10 0/0:99:44:44:1600:0:0:0,-10,-10 0/0:99:38:38:1335:0:0:0,-10,-10 0/0:55.4256:14:14:483:0:0:0,-4.21442,-10 0/0:99:43:43:1585:0:0:0,-10,-10 0/0:37.3638:8:8:297:0:0:0,-2.40824,-10 1/1:31.7619:25:0:0:25:926:-10,-7.52575,0 1/1:49.8237:31:0:0:31:1138:-10,-9.33193,0 0/1:99:28:17:626:11:406:-10,0,-10 0/1:1.31567:19:0:0:19:699:-10,-5.71957,0 1/1:37.7825:27:0:0:27:969:-10,-8.12781,0 0/0:73.4874:20:20:696:0:0:0,-6.0206,-10 0/0:97.567:28:28:1028:0:0:0,-8.42884,-10 0/0:79.508:22:22:785:0:0:0,-6.62266,-10 0/0:37.3638:8:8:299:0:0:0,-2.40824,-10 0/1:0.00443613:11:0:0:11:404:-10,-3.31133,0 0/0:99:44:44:1571:0:0:0,-10,-10 0/0:99:38:38:1403:0:0:0,-10,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:99:32:32:1189:0:0:0,-9.63296,-10 0/0:99:43:43:1618:0:0:0,-10,-10 0/0:31.3432:6:6:206:0:0:0,-1.80618,-10 0/0:79.508:22:22:819:0:0:0,-6.62266,-10 0/0:61.4462:16:16:566:0:0:0,-4.81648,-10 0/0:40.3741:9:9:311:0:0:0,-2.70927,-10 0/0:99:30:30:1129:0:0:0,-9.0309,-10 0/0:99:31:31:1084:0:0:0,-9.33193,-10 0/0:97.567:28:28:1044:0:0:0,-8.42884,-10 scaffold_458 283365 . G A 1076.22 . AB=0.428571;ABP=5.18177;AC=4;AF=0.0215054;AN=186;AO=44;CIGAR=1X;DP=2144;DPB=2144;DPRA=1.22954;EPP=4.78696;EPPR=3.03616;GTI=0;LEN=1;MEANALT=1;MQM=59.5;MQMR=59.9409;NS=93;NUMALT=1;ODDS=0.0692684;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1580;QR=75809;RO=2099;RPP=98.5551;RPPR=4560.93;RUN=1;SAF=19;SAP=4.78696;SAR=25;SRF=1052;SRP=3.03616;SRR=1047;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:77.452:19:19:642:0:0:0,-5.71957,-10 0/0:41.3284:7:7:255:0:0:0,-2.10721,-10 0/0:92.5025:24:24:879:0:0:0,-7.22472,-10 0/0:71.4314:17:17:638:0:0:0,-5.11751,-10 0/0:71.4314:17:17:640:0:0:0,-5.11751,-10 0/0:38.3181:6:6:228:0:0:0,-1.80618,-10 0/0:99:46:46:1636:0:0:0,-10,-10 0/0:95.5118:25:25:895:0:0:0,-7.52575,-10 0/0:50.3593:10:10:353:0:0:0,-3.0103,-10 0/0:32.2975:4:4:152:0:0:0,-1.20412,-10 0/0:50.3593:10:10:357:0:0:0,-3.0103,-10 0/0:47.349:9:9:342:0:0:0,-2.70927,-10 0/0:99:32:32:1126:0:0:0,-9.63296,-10 0/0:99:46:46:1621:0:0:0,-10,-10 0/0:99:27:27:981:0:0:0,-8.12781,-10 0/0:83.4725:21:21:789:0:0:0,-6.32163,-10 0/0:99:29:29:1050:0:0:0,-8.72987,-10 0/0:56.3799:12:12:429:0:0:0,-3.61236,-10 0/0:92.5025:24:24:839:0:0:0,-7.22472,-10 0/0:99:40:39:1441:1:16:0,-8.83914,-10 0/0:99:40:40:1446:0:0:0,-10,-10 0/0:99:30:29:1068:0:0:0,-8.72987,-10 0/0:23.2666:1:1:33:0:0:0,-0.30103,-3.3 0/0:99:27:27:983:0:0:0,-8.12781,-10 0/0:86.4827:22:22:788:0:0:0,-6.62266,-10 0/0:80.4623:20:20:731:0:0:0,-6.0206,-10 0/0:77.452:19:19:686:0:0:0,-5.71957,-10 0/0:74.4417:18:18:637:0:0:0,-5.41854,-10 0/0:92.5025:24:24:839:0:0:0,-7.22472,-10 0/0:99:40:40:1390:0:0:0,-10,-10 0/0:32.2975:4:4:120:0:0:0,-1.20412,-10 0/0:47.349:9:9:329:0:0:0,-2.70927,-10 0/0:99:28:28:989:0:0:0,-8.42884,-10 0/0:56.3799:12:12:426:0:0:0,-3.61236,-10 0/0:77.452:19:19:711:0:0:0,-5.71957,-10 0/0:44.3387:8:8:287:0:0:0,-2.40824,-10 0/0:74.4417:18:18:654:0:0:0,-5.41854,-10 0/0:99:34:34:1226:0:0:0,-10,-10 0/0:89.4927:23:23:863:0:0:0,-6.92369,-10 0/0:99:27:27:986:0:0:0,-8.12781,-10 0/0:99:32:32:1149:0:0:0,-9.63296,-10 0/0:98.5202:26:26:970:0:0:0,-7.82678,-10 0/0:99:29:29:1030:0:0:0,-8.72987,-10 0/0:99:49:49:1796:0:0:0,-10,-10 0/0:99:33:33:1166:0:0:0,-9.93399,-10 0/0:74.4417:18:18:630:0:0:0,-5.41854,-10 0/0:99:65:65:2388:0:0:0,-10,-10 0/0:99:34:34:1209:0:0:0,-10,-10 0/0:59.3902:13:13:488:0:0:0,-3.91339,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:44.3387:8:8:257:0:0:0,-2.40824,-10 0/0:99:39:39:1403:0:0:0,-10,-10 0/0:68.4211:16:16:603:0:0:0,-4.81648,-10 0/0:53.3696:11:11:416:0:0:0,-3.31133,-10 0/0:99:44:44:1632:0:0:0,-10,-10 0/0:71.4314:17:17:608:0:0:0,-5.11751,-10 0/0:82.4917:30:29:1011:1:16:0,-5.95378,-10 0/0:47.349:9:9:338:0:0:0,-2.70927,-10 0/0:95.5118:25:25:939:0:0:0,-7.52575,-10 0/0:44.3387:8:8:281:0:0:0,-2.40824,-10 0/0:99:38:38:1385:0:0:0,-10,-10 0/0:77.452:19:19:702:0:0:0,-5.71957,-10 0/0:99:48:48:1788:0:0:0,-10,-10 0/0:99:29:29:1035:0:0:0,-8.72987,-10 0/0:68.4211:16:16:568:0:0:0,-4.81648,-10 0/1:99:19:10:357:9:329:-10,0,-10 0/1:99:30:18:644:12:454:-10,0,-10 0/0:86.4827:22:22:755:0:0:0,-6.62266,-10 0/0:99:40:40:1444:0:0:0,-10,-10 0/0:71.4314:17:17:641:0:0:0,-5.11751,-10 0/0:95.5118:25:25:854:0:0:0,-7.52575,-10 0/0:95.5118:25:25:907:0:0:0,-7.52575,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:74.4417:18:18:637:0:0:0,-5.41854,-10 0/0:99:27:27:913:0:0:0,-8.12781,-10 0/0:65.4108:15:15:540:0:0:0,-4.51545,-10 0/0:74.4417:18:18:684:0:0:0,-5.41854,-10 0/0:62.4005:14:14:478:0:0:0,-4.21442,-10 0/0:35.3078:5:5:184:0:0:0,-1.50515,-10 0/0:80.4623:20:20:744:0:0:0,-6.0206,-10 0/0:99:34:34:1185:0:0:0,-10,-10 0/0:99:39:39:1440:0:0:0,-10,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:99:37:37:1360:0:0:0,-10,-10 0/0:99:39:39:1426:0:0:0,-10,-10 0/0:32.2975:4:4:152:0:0:0,-1.20412,-10 0/0:65.4108:15:15:516:0:0:0,-4.51545,-10 1/1:3.22052:21:0:0:21:765:-10,-6.32163,0 0/0:29.2872:3:3:109:0:0:0,-0.90309,-10 0/0:71.4314:17:17:637:0:0:0,-5.11751,-10 0/0:65.4108:15:15:541:0:0:0,-4.51545,-10 0/0:86.4827:22:22:763:0:0:0,-6.62266,-10 scaffold_463 190834 . T A 178.012 . AB=0.4;ABP=4.74748;AC=1;AF=0.00543478;AN=184;AO=9;CIGAR=1X;DP=1535;DPB=1535;DPRA=1.05;EPP=3.25157;EPPR=5.65005;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9356;NS=92;NUMALT=1;ODDS=10.7766;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=316;QR=55480;RO=1521;RPP=22.5536;RPPR=3305.82;RUN=1;SAF=4;SAP=3.25157;SAR=5;SRF=782;SRP=5.65005;SRR=739;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:67.8748:10:10:324:0:0:0,-3.0103,-10 0/0:82.9262:15:15:538:0:0:0,-4.51545,-10 0/0:99:22:22:812:0:0:0,-6.62266,-10 0/0:67.8748:10:10:353:0:0:0,-3.0103,-10 0/0:79.916:14:14:522:0:0:0,-4.21442,-10 0/0:67.8748:10:10:346:0:0:0,-3.0103,-10 0/0:99:32:32:1191:0:0:0,-9.63296,-10 0/0:88.9465:17:17:620:0:0:0,-5.11751,-10 0/0:85.9364:16:16:579:0:0:0,-4.81648,-10 0/0:52.8233:5:5:190:0:0:0,-1.50515,-10 0/0:55.8336:6:6:192:0:0:0,-1.80618,-10 0/0:61.8542:8:8:302:0:0:0,-2.40824,-10 0/0:99:29:29:1034:0:0:0,-8.72987,-10 0/0:99:28:28:1020:0:0:0,-8.42884,-10 0/0:99:34:34:1278:0:0:0,-10,-10 0/0:99:22:22:826:0:0:0,-6.62266,-10 0/0:85.9364:16:16:608:0:0:0,-4.81648,-10 0/0:52.8233:5:5:190:0:0:0,-1.50515,-10 0/0:99:25:25:939:0:0:0,-7.52575,-10 0/0:99:27:27:982:0:0:0,-8.12781,-10 0/0:91.9563:18:18:655:0:0:0,-5.41854,-10 0/0:99:25:25:917:0:0:0,-7.52575,-10 0/0:61.8542:8:8:303:0:0:0,-2.40824,-10 0/0:88.9465:17:17:582:0:0:0,-5.11751,-10 0/0:97.9743:20:20:745:0:0:0,-6.0206,-10 0/0:85.9364:16:16:568:0:0:0,-4.81648,-10 0/0:99:22:22:810:0:0:0,-6.62266,-10 0/0:70.8851:11:11:411:0:0:0,-3.31133,-10 0/0:85.9364:16:16:591:0:0:0,-4.81648,-10 0/0:99:28:27:1012:0:0:0,-8.12781,-10 0/0:67.8748:10:10:371:0:0:0,-3.0103,-10 0/0:49.813:4:4:139:0:0:0,-1.20412,-10 0/0:67.8748:10:10:376:0:0:0,-3.0103,-10 0/0:70.8851:12:11:413:0:0:0,-3.31133,-10 0/0:94.9658:19:19:691:0:0:0,-5.71957,-10 0/0:49.813:4:4:142:0:0:0,-1.20412,-10 0/0:73.8954:12:12:439:0:0:0,-3.61236,-10 0/0:99:25:25:893:0:0:0,-7.52575,-10 0/0:85.9364:16:16:591:0:0:0,-4.81648,-10 0/0:61.8542:8:8:294:0:0:0,-2.40824,-10 0/0:97.9743:20:20:749:0:0:0,-6.0206,-10 0/0:85.9364:16:16:594:0:0:0,-4.81648,-10 0/0:76.9057:13:13:489:0:0:0,-3.91339,-10 0/0:88.9465:17:17:610:0:0:0,-5.11751,-10 0/0:97.9743:20:20:759:0:0:0,-6.0206,-10 0/0:79.916:14:14:508:0:0:0,-4.21442,-10 0/0:99:38:38:1372:0:0:0,-10,-10 0/0:99:32:32:1153:0:0:0,-9.63296,-10 0/0:85.9364:16:16:564:0:0:0,-4.81648,-10 0/0:99:25:25:931:0:0:0,-7.52575,-10 0/0:70.8851:11:11:412:0:0:0,-3.31133,-10 0/0:99:26:26:896:0:0:0,-7.82678,-10 0/0:61.8542:8:8:296:0:0:0,-2.40824,-10 0/0:46.8027:4:3:111:0:0:0,-0.90309,-10 0/0:99:38:38:1370:0:0:0,-10,-10 0/0:73.8954:12:12:429:0:0:0,-3.61236,-10 0/0:94.9658:19:19:660:0:0:0,-5.71957,-10 0/0:73.8954:12:12:422:0:0:0,-3.61236,-10 0/0:56.4242:15:14:510:1:16:0,-1.73936,-10 0/0:55.8336:6:6:201:0:0:0,-1.80618,-10 0/0:99:28:28:1034:0:0:0,-8.42884,-10 0/0:73.8954:12:12:422:0:0:0,-3.61236,-10 0/0:99:31:31:1170:0:0:0,-9.33193,-10 0/0:94.9658:19:19:701:0:0:0,-5.71957,-10 0/0:73.8954:12:12:445:0:0:0,-3.61236,-10 0/0:99:26:26:947:0:0:0,-7.82678,-10 0/0:99:24:23:798:0:0:0,-6.92369,-10 0/0:61.8542:8:8:301:0:0:0,-2.40824,-10 0/0:85.9364:16:16:578:0:0:0,-4.81648,-10 0/0:61.8542:8:8:302:0:0:0,-2.40824,-10 0/0:79.916:15:14:515:0:0:0,-4.21442,-10 0/0:99:21:21:770:0:0:0,-6.32163,-10 0/1:99:20:12:448:8:300:-10,0,-10 0/0:79.916:14:14:519:0:0:0,-4.21442,-10 0/0:99:22:22:786:0:0:0,-6.62266,-10 0/0:64.8645:9:9:330:0:0:0,-2.70927,-10 0/0:94.9658:19:19:701:0:0:0,-5.71957,-10 0/0:88.9465:17:17:599:0:0:0,-5.11751,-10 0/0:52.8233:5:5:184:0:0:0,-1.50515,-10 0/0:52.8233:5:5:164:0:0:0,-1.50515,-10 0/0:99:27:27:1001:0:0:0,-8.12781,-10 0/0:99:26:26:968:0:0:0,-7.82678,-10 0/0:79.916:14:14:524:0:0:0,-4.21442,-10 0/0:85.9364:16:16:607:0:0:0,-4.81648,-10 0/0:64.8645:9:9:318:0:0:0,-2.70927,-10 0/0:55.8336:6:6:205:0:0:0,-1.80618,-10 0/0:82.9262:15:15:561:0:0:0,-4.51545,-10 0/0:88.9465:17:17:577:0:0:0,-5.11751,-10 0/0:58.8439:7:7:264:0:0:0,-2.10721,-10 0/0:88.9465:17:17:614:0:0:0,-5.11751,-10 0/0:99:26:26:933:0:0:0,-7.82678,-10 0/0:67.8748:10:10:369:0:0:0,-3.0103,-10 scaffold_463 190851 . C CT 1738.07 . AB=0.863636;ABP=53.5464;AC=7;AF=0.0380435;AN=184;AO=72;CIGAR=1M1I2M;DP=1543;DPB=1567;DPRA=0.926416;EPP=12.7819;EPPR=3.54685;GTI=2;LEN=1;MEANALT=1;MQM=59.75;MQMR=59.9555;NS=92;NUMALT=1;ODDS=0.780873;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2586;QR=53256;RO=1461;RPP=159.356;RPPR=3158.18;RUN=1;SAF=45;SAP=12.7819;SAR=27;SRF=742;SRP=3.79655;SRR=719;TYPE=ins GT:GQ:DP:RO:QR:AO:QA:GL 0|0:37.8418:10:10:338:0:0:0,-3.0103,-10 0|0:49.883:15:14:505:0:0:0,-4.21442,-10 0|0:70.9551:22:21:793:0:0:0,-6.32163,-10 0|0:37.8418:10:10:349:0:0:0,-3.0103,-10 0|0:49.883:14:14:513:0:0:0,-4.21442,-10 0|0:37.8418:10:10:352:0:0:0,-3.0103,-10 0|0:99:32:32:1196:0:0:0,-9.63296,-10 1|1:15.1198:17:0:0:17:601:-10,-5.11751,0 0|1:1.35498:16:0:0:16:568:-10,-4.81648,0 0|0:22.7903:5:5:190:0:0:0,-1.50515,-10 0|0:25.8006:6:6:203:0:0:0,-1.80618,-10 0|0:31.8212:8:8:302:0:0:0,-2.40824,-10 0|0:95.0362:29:29:1070:0:0:0,-8.72987,-10 0|0:98.0452:30:30:1057:0:0:0,-9.0309,-10 0|0:99:34:34:1269:0:0:0,-10,-10 0|0:73.9654:22:22:776:0:0:0,-6.62266,-10 0|0:55.9036:16:16:579:0:0:0,-4.81648,-10 0|0:22.7903:5:5:189:0:0:0,-1.50515,-10 0|0:82.9961:25:25:923:0:0:0,-7.52575,-10 0|0:89.0166:27:27:1008:0:0:0,-8.12781,-10 0|0:61.9242:18:18:656:0:0:0,-5.41854,-10 0|0:86.0065:26:26:960:0:0:0,-7.82678,-10 0|0:31.8212:8:8:297:0:0:0,-2.40824,-10 0|0:55.9036:17:16:583:0:0:0,-4.81648,-10 0|0:67.9448:20:20:737:0:0:0,-6.0206,-10 0|0:55.9036:16:16:598:0:0:0,-4.81648,-10 0|0:73.9654:22:22:816:0:0:0,-6.62266,-10 0|0:40.8521:11:11:412:0:0:0,-3.31133,-10 0|0:55.9036:16:16:595:0:0:0,-4.81648,-10 0|0:92.0266:28:28:1027:0:0:0,-8.42884,-10 0|0:37.8418:10:10:343:0:0:0,-3.0103,-10 0|0:19.78:4:4:135:0:0:0,-1.20412,-10 0|0:37.8418:10:10:367:0:0:0,-3.0103,-10 0|0:43.8624:12:12:436:0:0:0,-3.61236,-10 0|0:64.9345:19:19:687:0:0:0,-5.71957,-10 0|0:19.78:4:4:134:0:0:0,-1.20412,-10 0|0:43.8624:12:12:429:0:0:0,-3.61236,-10 0|0:79.986:25:24:875:0:0:0,-7.22472,-10 0|0:55.9036:16:16:594:0:0:0,-4.81648,-10 0|0:31.8212:8:8:287:0:0:0,-2.40824,-10 0|0:70.9551:21:21:776:0:0:0,-6.32163,-10 0|0:55.9036:16:16:606:0:0:0,-4.81648,-10 0|0:46.8727:13:13:469:0:0:0,-3.91339,-10 0|0:58.9139:17:17:595:0:0:0,-5.11751,-10 0|0:67.9448:20:20:731:0:0:0,-6.0206,-10 0|0:49.883:14:14:500:0:0:0,-4.21442,-10 0|0:99:38:38:1396:0:0:0,-10,-10 0|0:99:32:32:1139:0:0:0,-9.63296,-10 0|0:52.8933:16:15:554:0:0:0,-4.51545,-10 0|0:86.0065:26:26:949:0:0:0,-7.82678,-10 0|0:40.8521:11:11:413:0:0:0,-3.31133,-10 0|0:86.0065:26:26:961:0:0:0,-7.82678,-10 0|0:31.8212:8:8:292:0:0:0,-2.40824,-10 0|0:19.78:4:4:135:0:0:0,-1.20412,-10 0|0:99:38:38:1378:0:0:0,-10,-10 0|1:0.0733645:12:0:0:12:422:-10,-3.61236,0 0|0:64.9345:19:19:686:0:0:0,-5.71957,-10 0|0:43.8624:12:12:396:0:0:0,-3.61236,-10 0|0:55.9036:16:16:581:0:0:0,-4.81648,-10 0|0:25.8006:6:6:224:0:0:0,-1.80618,-10 0|0:92.0266:28:28:1059:0:0:0,-8.42884,-10 0|0:43.8624:12:12:418:0:0:0,-3.61236,-10 0|0:99:31:31:1141:0:0:0,-9.33193,-10 0|0:64.9345:19:19:708:0:0:0,-5.71957,-10 0|0:43.8624:12:12:431:0:0:0,-3.61236,-10 0|0:82.9961:26:25:889:0:0:0,-7.52575,-10 0|0:76.9757:24:23:819:0:0:0,-6.92369,-10 0|0:31.8212:8:8:303:0:0:0,-2.40824,-10 0|0:55.9036:16:16:584:0:0:0,-4.81648,-10 0|0:28.8109:8:7:264:0:0:0,-2.10721,-10 0|0:52.8933:15:15:562:0:0:0,-4.51545,-10 0|0:70.9551:21:21:782:0:0:0,-6.32163,-10 0|0:67.9448:20:20:734:0:0:0,-6.0206,-10 0|0:49.883:14:14:522:0:0:0,-4.21442,-10 0|0:73.9654:22:22:771:0:0:0,-6.62266,-10 0|0:34.8315:9:9:321:0:0:0,-2.70927,-10 0|0:64.9345:19:19:712:0:0:0,-5.71957,-10 1|1:15.1198:17:0:0:17:618:-10,-5.11751,0 0|0:22.7903:5:5:180:0:0:0,-1.50515,-10 0|0:22.7903:5:5:176:0:0:0,-1.50515,-10 0|0:86.0065:27:26:940:0:0:0,-7.82678,-10 0|0:89.0166:27:27:968:0:0:0,-8.12781,-10 0|0:49.883:14:14:519:0:0:0,-4.21442,-10 0|1:99:16:6:228:10:377:-10,0,-10 0|0:37.8418:10:10:364:0:0:0,-3.0103,-10 0|0:25.8006:6:6:213:0:0:0,-1.80618,-10 0|0:52.8933:15:15:544:0:0:0,-4.51545,-10 0|0:58.9139:17:17:606:0:0:0,-5.11751,-10 0|0:28.8109:7:7:264:0:0:0,-2.10721,-10 0|0:58.9139:17:17:616:0:0:0,-5.11751,-10 0|0:86.0065:26:26:920:0:0:0,-7.82678,-10 0|0:34.8315:10:9:337:0:0:0,-2.70927,-10 scaffold_463 215635 . T G 472.614 . AB=0.625;ABP=7.35324;AC=2;AF=0.0108696;AN=184;AO=20;CIGAR=1X;DP=2321;DPB=2321;DPRA=0.629096;EPP=4.74748;EPPR=6.41208;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.8603;NS=92;NUMALT=1;ODDS=11.1588;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=743;QR=83341;RO=2298;RPP=46.4397;RPPR=4984.37;RUN=1;SAF=8;SAP=4.74748;SAR=12;SRF=1120;SRP=6.18908;SRR=1178;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:20:20:750:0:0:0,-6.0206,-10 0/0:72.5444:10:10:358:0:0:0,-3.0103,-10 0/0:99:20:20:694:0:0:0,-6.0206,-10 0/0:99:28:28:1037:0:0:0,-8.42884,-10 0/0:93.616:17:17:615:0:0:0,-5.11751,-10 0/0:69.5341:9:9:336:0:0:0,-2.70927,-10 0/0:99:49:49:1735:0:0:0,-10,-10 0/0:99:43:43:1570:0:0:0,-10,-10 0/0:84.5853:14:14:525:0:0:0,-4.21442,-10 0/0:48.462:2:2:75:0:0:0,-0.60206,-7.125 0/0:69.5341:9:9:290:0:0:0,-2.70927,-10 0/0:66.5238:8:8:287:0:0:0,-2.40824,-10 0/0:99:39:39:1426:0:0:0,-10,-10 0/0:99:44:44:1566:0:0:0,-10,-10 0/0:99:41:41:1534:0:0:0,-10,-10 0/0:99:24:24:887:0:0:0,-7.22472,-10 0/0:99:34:34:1241:0:0:0,-10,-10 0/0:69.5341:9:9:308:0:0:0,-2.70927,-10 0/0:99:35:35:1309:0:0:0,-10,-10 0/0:99:52:52:1880:0:0:0,-10,-10 0/0:99:20:20:709:0:0:0,-6.0206,-10 0/0:99:46:46:1665:0:0:0,-10,-10 0/0:54.4826:4:4:152:0:0:0,-1.20412,-10 0/0:99:29:29:1079:0:0:0,-8.72987,-10 0/0:99:33:33:1211:0:0:0,-9.93399,-10 0/0:99:34:34:1240:0:0:0,-10,-10 0/0:99:21:21:744:0:0:0,-6.32163,-10 0/0:99:23:23:864:0:0:0,-6.92369,-10 0/0:99:30:30:1111:0:0:0,-9.0309,-10 0/0:99:37:37:1387:0:0:0,-10,-10 0/0:81.5752:13:13:457:0:0:0,-3.91339,-10 0/0:66.5238:8:8:263:0:0:0,-2.40824,-10 0/0:99:22:22:772:0:0:0,-6.62266,-10 0/0:87.5952:15:15:544:0:0:0,-4.51545,-10 0/0:99:19:19:718:0:0:0,-5.71957,-10 0/0:60.5032:6:6:201:0:0:0,-1.80618,-10 0/0:87.5952:15:15:557:0:0:0,-4.51545,-10 0/0:99:34:34:1259:0:0:0,-10,-10 0/0:99:22:21:770:0:0:0,-6.32163,-10 0/0:75.5547:11:11:411:0:0:0,-3.31133,-10 0/0:99:42:42:1572:0:0:0,-10,-10 0/0:99:20:20:727:0:0:0,-6.0206,-10 0/0:99:28:28:1018:0:0:0,-8.42884,-10 0/0:99:47:47:1680:0:0:0,-10,-10 0/0:99:31:31:1142:0:0:0,-9.33193,-10 0/0:93.616:17:17:621:0:0:0,-5.11751,-10 0/0:99:47:47:1663:0:0:0,-10,-10 0/0:99:30:30:1101:0:0:0,-9.0309,-10 0/0:99:24:24:896:0:0:0,-7.22472,-10 0/0:99:45:45:1587:0:0:0,-10,-10 0/0:84.5853:14:14:530:0:0:0,-4.21442,-10 0/0:99:50:50:1838:0:0:0,-10,-10 0/0:99:21:21:782:0:0:0,-6.32163,-10 0/0:75.5547:11:11:383:0:0:0,-3.31133,-10 0/0:99:53:53:1956:0:0:0,-10,-10 0/0:81.5752:13:13:449:0:0:0,-3.91339,-10 0/0:99:29:29:1056:0:0:0,-8.72987,-10 0/0:75.5547:11:11:404:0:0:0,-3.31133,-10 0/0:93.616:17:17:630:0:0:0,-5.11751,-10 0/0:99:22:22:821:0:0:0,-6.62266,-10 0/0:99:32:32:1137:0:0:0,-9.63296,-10 0/0:99:33:33:1220:0:0:0,-9.93399,-10 0/0:99:46:46:1680:0:0:0,-10,-10 0/0:99:29:29:1086:0:0:0,-8.72987,-10 0/0:99:25:25:911:0:0:0,-7.52575,-10 0/0:99:45:45:1636:0:0:0,-10,-10 0/0:96.6213:18:18:645:0:0:0,-5.41854,-10 0/0:96.6213:18:18:655:0:0:0,-5.41854,-10 0/0:99:45:45:1603:0:0:0,-10,-10 0/0:78.565:12:12:447:0:0:0,-3.61236,-10 0/0:99:22:22:748:0:0:0,-6.62266,-10 0/0:99:35:35:1252:0:0:0,-10,-10 0/0:99:27:27:950:0:0:0,-8.12781,-10 0/0:96.6213:18:18:653:0:0:0,-5.41854,-10 0/0:99:32:31:1147:0:0:0,-9.33193,-10 0/0:99:21:21:690:0:0:0,-6.32163,-10 0/0:93.616:17:17:599:0:0:0,-5.11751,-10 0/0:75.5547:12:11:392:0:0:0,-3.31133,-10 0/0:72.5444:10:10:379:0:0:0,-3.0103,-10 0/0:66.5238:8:8:292:0:0:0,-2.40824,-10 0/0:99:48:48:1746:0:0:0,-10,-10 0/0:99:31:31:1088:0:0:0,-9.33193,-10 0/0:99:33:33:1190:0:0:0,-9.93399,-10 0/0:99:29:29:1075:0:0:0,-8.72987,-10 0/0:99:48:48:1710:0:0:0,-10,-10 0/0:63.5135:7:7:260:0:0:0,-2.10721,-10 0/0:99:19:19:681:0:0:0,-5.71957,-10 0/0:99:22:22:767:0:0:0,-6.62266,-10 0/0:60.5032:6:6:206:0:0:0,-1.80618,-10 0/1:99:17:11:347:6:228:-10,0,-10 0/0:99:20:20:718:0:0:0,-6.0206,-10 0/1:94.1909:15:1:38:14:515:-10,0,-0.460641 scaffold_498 116162 . C T 1661.78 . AB=0.590476;ABP=10.476;AC=6;AF=0.0326087;AN=184;AO=64;CIGAR=1X;DP=1566;DPB=1566;DPRA=1.07958;EPP=3.14602;EPPR=3.38139;GTI=2;LEN=1;MEANALT=1.125;MQM=59.7812;MQMR=59.9466;NS=92;NUMALT=1;ODDS=3.72138;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2385;QR=54124;RO=1498;RPP=141.985;RPPR=3255.88;RUN=1;SAF=33;SAP=3.14602;SAR=31;SRF=741;SRP=3.38139;SRR=757;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.4851:14:14:495:0:0:0,-4.21442,-10 0/0:31.4027:6:6:222:0:0:0,-1.80618,-10 0/0:64.516:17:17:639:0:0:0,-5.11751,-10 0/0:43.4439:10:10:374:0:0:0,-3.0103,-10 0/0:43.4439:10:10:368:0:0:0,-3.0103,-10 0/0:37.4233:8:8:257:0:0:0,-2.40824,-10 0/1:99:38:16:555:22:822:-10,0,-10 0/0:85.588:24:24:876:0:0:0,-7.22472,-10 0/0:40.4336:9:9:340:0:0:0,-2.70927,-10 0/1:0.00260374:6:0:0:6:224:-10,-1.80618,0 0/0:43.4439:10:10:349:0:0:0,-3.0103,-10 0/0:40.4336:9:9:337:0:0:0,-2.70927,-10 0/0:73.5469:20:20:725:0:0:0,-6.0206,-10 0/1:99:20:13:465:7:266:-10,0,-10 0/0:79.5674:22:22:797:0:0:0,-6.62266,-10 0/0:52.4748:13:13:471:0:0:0,-3.91339,-10 0/0:79.5674:22:22:796:0:0:0,-6.62266,-10 0/0:31.4027:6:6:220:0:0:0,-1.80618,-10 0/1:99:19:5:179:13:492:-10,0,-10 0/0:99:32:32:1137:0:0:0,-9.63296,-10 0/0:61.5057:16:16:554:0:0:0,-4.81648,-10 0/0:67.5263:18:18:659:0:0:0,-5.41854,-10 0/0:28.3924:5:5:188:0:0:0,-1.50515,-10 0/0:76.5571:21:21:776:0:0:0,-6.32163,-10 0/0:70.5366:19:19:712:0:0:0,-5.71957,-10 0/0:58.4954:15:15:532:0:0:0,-4.51545,-10 0/0:73.5469:20:20:742:0:0:0,-6.0206,-10 0/0:34.413:7:7:254:0:0:0,-2.10721,-10 0/0:82.5776:23:23:866:0:0:0,-6.92369,-10 0/0:91.6085:26:26:943:0:0:0,-7.82678,-10 0/0:22.3718:3:3:114:0:0:0,-0.90309,-10 0/0:52.4748:13:13:467:0:0:0,-3.91339,-10 0/0:43.4439:10:10:364:0:0:0,-3.0103,-10 0/0:46.4542:11:11:394:0:0:0,-3.31133,-10 0/0:64.516:17:17:597:0:0:0,-5.11751,-10 0/0:34.413:7:7:262:0:0:0,-2.10721,-10 0/0:55.4851:14:14:523:0:0:0,-4.21442,-10 0/0:88.5976:25:25:915:0:0:0,-7.52575,-10 0/0:55.4851:14:14:529:0:0:0,-4.21442,-10 0/0:67.5263:19:18:550:0:0:0,-5.41854,-10 0/0:85.588:24:24:850:0:0:0,-7.22472,-10 0/0:39.0546:17:16:542:1:16:0,-2.28706,-10 0/0:79.5674:22:22:818:0:0:0,-6.62266,-10 0/0:99:31:31:1111:0:0:0,-9.33193,-10 0/0:79.5674:22:22:755:0:0:0,-6.62266,-10 0/0:43.4439:10:10:378:0:0:0,-3.0103,-10 0/0:99:30:30:1048:0:0:0,-9.0309,-10 0/0:70.5366:19:19:687:0:0:0,-5.71957,-10 0/0:28.3924:5:5:177:0:0:0,-1.50515,-10 0/0:99:41:41:1508:0:0:0,-10,-10 0/0:34.413:7:7:257:0:0:0,-2.10721,-10 0/0:99:32:32:1126:0:0:0,-9.63296,-10 0/0:61.5057:16:16:554:0:0:0,-4.81648,-10 0/0:34.413:8:7:262:0:0:0,-2.10721,-10 0/0:99:45:45:1634:0:0:0,-10,-10 0/0:55.4851:15:14:507:0:0:0,-4.21442,-10 0/0:88.5976:25:25:909:0:0:0,-7.52575,-10 0/0:28.3924:5:5:189:0:0:0,-1.50515,-10 0/0:61.5057:16:16:579:0:0:0,-4.81648,-10 0/0:40.4336:9:9:325:0:0:0,-2.70927,-10 0/0:85.588:24:24:847:0:0:0,-7.22472,-10 0/0:61.5057:16:16:577:0:0:0,-4.81648,-10 0/0:99:38:38:1363:0:0:0,-10,-10 0/0:61.5057:16:16:558:0:0:0,-4.81648,-10 0/0:52.4748:13:13:482:0:0:0,-3.91339,-10 0/0:91.6085:26:26:937:0:0:0,-7.82678,-10 0/0:67.5263:18:18:657:0:0:0,-5.41854,-10 0/0:34.413:7:7:266:0:0:0,-2.10721,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:43.4439:10:10:357:0:0:0,-3.0103,-10 0/0:61.5057:16:16:598:0:0:0,-4.81648,-10 0/0:99:35:35:1283:0:0:0,-10,-10 0/0:73.5469:20:20:708:0:0:0,-6.0206,-10 0/0:70.5366:19:19:696:0:0:0,-5.71957,-10 0/0:91.6085:26:26:949:0:0:0,-7.82678,-10 0/0:40.4336:9:9:342:0:0:0,-2.70927,-10 0/1:0.00260374:6:0:0:6:228:-10,-1.80618,0 0/0:67.5263:18:18:664:0:0:0,-5.41854,-10 0/0:25.3821:4:4:130:0:0:0,-1.20412,-10 0/0:46.4542:11:11:386:0:0:0,-3.31133,-10 0/0:36.6291:24:23:866:1:38:0,-2.04451,-10 0/1:99:16:8:297:8:299:-10,0,-10 0/0:76.5571:21:21:766:0:0:0,-6.32163,-10 0/0:97.6229:28:28:1017:0:0:0,-8.42884,-10 0/0:76.5571:21:21:748:0:0:0,-6.32163,-10 0/0:16.3512:1:1:38:0:0:0,-0.30103,-3.8 0/0:61.5057:16:16:601:0:0:0,-4.81648,-10 0/0:52.4748:13:13:476:0:0:0,-3.91339,-10 0/0:31.4027:6:6:206:0:0:0,-1.80618,-10 0/0:43.4439:10:10:369:0:0:0,-3.0103,-10 0/0:52.4748:13:13:454:0:0:0,-3.91339,-10 0/0:52.4748:13:13:464:0:0:0,-3.91339,-10 scaffold_498 182623 . C G 1682.68 . AB=0.5;ABP=3.0103;AC=5;AF=0.0271739;AN=184;AO=71;CIGAR=1X;DP=2571;DPB=2571;DPRA=1.20016;EPP=3.04088;EPPR=6.68156;GTI=0;LEN=1;MEANALT=1;MQM=56.9437;MQMR=59.9064;NS=92;NUMALT=1;ODDS=1.0093;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2402;QR=90516;RO=2499;RPP=157.185;RPPR=5429.52;RUN=1;SAF=36;SAP=3.04088;SAR=35;SRF=1217;SRP=6.68156;SRR=1282;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:56.265:14:14:497:0:0:0,-4.21442,-10 0/0:53.2547:13:13:481:0:0:0,-3.91339,-10 0/0:99:32:32:1162:0:0:0,-9.63296,-10 1/1:17.8764:25:0:0:25:864:-10,-7.52575,0 0/0:65.2959:17:17:553:0:0:0,-5.11751,-10 0/0:53.2547:13:13:461:0:0:0,-3.91339,-10 0/0:99:55:55:1992:0:0:0,-10,-10 0/0:99:54:54:1952:0:0:0,-10,-10 1/1:5.83516:21:0:0:21:713:-10,-6.32163,0 0/0:29.1723:5:5:186:0:0:0,-1.50515,-10 0/0:26.162:4:4:152:0:0:0,-1.20412,-10 0/0:56.265:14:14:518:0:0:0,-4.21442,-10 0/0:99:35:35:1228:0:0:0,-10,-10 0/0:99:48:48:1743:0:0:0,-10,-10 0/0:99:32:32:1182:0:0:0,-9.63296,-10 0/0:99:38:38:1367:0:0:0,-10,-10 0/0:99:41:41:1479:0:0:0,-10,-10 0/0:65.2959:17:17:593:0:0:0,-5.11751,-10 0/0:99:35:35:1258:0:0:0,-10,-10 0/0:99:53:53:1888:0:0:0,-10,-10 0/0:86.368:24:24:891:0:0:0,-7.22472,-10 0/0:99:43:43:1572:0:0:0,-10,-10 0/0:62.2856:16:16:590:0:0:0,-4.81648,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:83.3577:23:23:835:0:0:0,-6.92369,-10 0/0:99:39:39:1446:0:0:0,-10,-10 0/0:99:33:33:1218:0:0:0,-9.93399,-10 0/0:62.2856:16:16:534:0:0:0,-4.81648,-10 0/0:99:39:39:1358:0:0:0,-10,-10 0/0:99:35:35:1261:0:0:0,-10,-10 0/0:65.2959:17:17:612:0:0:0,-5.11751,-10 0/0:26.162:4:4:152:0:0:0,-1.20412,-10 0/0:99:40:40:1477:0:0:0,-10,-10 0/0:77.337:21:21:789:0:0:0,-6.32163,-10 0/0:71.3165:19:19:674:0:0:0,-5.71957,-10 0/0:41.2135:9:9:339:0:0:0,-2.70927,-10 0/0:77.337:21:21:762:0:0:0,-6.32163,-10 0/0:99:36:36:1285:0:0:0,-10,-10 0/0:77.337:21:21:784:0:0:0,-6.32163,-10 0/0:95.3987:27:27:999:0:0:0,-8.12781,-10 0/0:99:41:41:1433:0:0:0,-10,-10 0/0:99:31:31:1152:0:0:0,-9.33193,-10 0/0:95.3987:27:27:963:0:0:0,-8.12781,-10 0/0:99:36:36:1288:0:0:0,-10,-10 0/0:99:33:33:1194:0:0:0,-9.93399,-10 0/0:71.3165:19:19:674:0:0:0,-5.71957,-10 0/0:99:49:48:1759:0:0:0,-10,-10 0/0:99:41:41:1501:0:0:0,-10,-10 0/0:77.337:21:21:782:0:0:0,-6.32163,-10 0/0:99:41:41:1415:0:0:0,-10,-10 0/0:59.2753:15:15:556:0:0:0,-4.51545,-10 0/0:99:52:52:1891:0:0:0,-10,-10 0/0:65.2959:17:17:608:0:0:0,-5.11751,-10 0/0:35.1929:7:7:256:0:0:0,-2.10721,-10 0/0:99:51:51:1866:0:0:0,-10,-10 0/0:89.3782:25:25:935:0:0:0,-7.52575,-10 0/0:99:37:37:1329:0:0:0,-10,-10 0/0:47.2341:11:11:404:0:0:0,-3.31133,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:89.3782:25:25:884:0:0:0,-7.52575,-10 0/0:99:41:41:1496:0:0:0,-10,-10 0/0:99:36:36:1299:0:0:0,-10,-10 0/0:99:58:58:2165:0:0:0,-10,-10 0/0:95.3987:27:27:1006:0:0:0,-8.12781,-10 0/0:68.3062:18:18:668:0:0:0,-5.41854,-10 0/1:99:48:24:868:24:809:-10,0,-10 0/0:99:34:34:1228:0:0:0,-10,-10 0/0:47.2341:11:11:415:0:0:0,-3.31133,-10 0/0:99:46:46:1707:0:0:0,-10,-10 0/0:53.2547:13:13:463:0:0:0,-3.91339,-10 0/0:74.3268:20:20:706:0:0:0,-6.0206,-10 0/0:99:36:36:1318:0:0:0,-10,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:68.3062:18:18:577:0:0:0,-5.41854,-10 0/0:99:39:38:1380:1:16:0,-8.54911,-10 0/0:62.2856:16:16:598:0:0:0,-4.81648,-10 0/0:83.3577:23:23:793:0:0:0,-6.92369,-10 0/0:71.3165:19:19:700:0:0:0,-5.71957,-10 0/0:41.2135:9:9:327:0:0:0,-2.70927,-10 0/0:41.2135:9:9:319:0:0:0,-2.70927,-10 0/0:99:55:55:1930:0:0:0,-10,-10 0/0:99:33:33:1105:0:0:0,-9.93399,-10 0/0:99:30:30:1128:0:0:0,-9.0309,-10 0/0:71.3165:19:19:697:0:0:0,-5.71957,-10 0/0:89.3782:25:25:918:0:0:0,-7.52575,-10 0/0:35.1929:7:7:266:0:0:0,-2.10721,-10 0/0:92.3885:26:26:958:0:0:0,-7.82678,-10 0/0:77.337:21:21:779:0:0:0,-6.32163,-10 0/0:59.2753:15:15:561:0:0:0,-4.51545,-10 0/0:80.3474:22:22:811:0:0:0,-6.62266,-10 0/0:99:43:43:1555:0:0:0,-10,-10 0/0:99:29:29:1061:0:0:0,-8.72987,-10 scaffold_510 88382 . T C 1267.13 . AB=0.480392;ABP=3.35092;AC=3;AF=0.0163043;AN=184;AO=51;CIGAR=1X;DP=1860;DPB=1860;DPRA=1.69381;EPP=15.3153;EPPR=7.05058;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9912;NS=92;NUMALT=1;ODDS=2.82058;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1867;QR=66082;RO=1808;RPP=113.755;RPPR=3929.03;RUN=1;SAF=17;SAP=15.3153;SAR=34;SRF=933;SRP=7.05058;SRR=875;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:28.1172:8:8:301:0:0:0,-2.40824,-10 0/0:43.1687:13:13:482:0:0:0,-3.91339,-10 0/0:70.2614:22:22:795:0:0:0,-6.62266,-10 0/0:64.2408:20:20:754:0:0:0,-6.0206,-10 0/0:55.2099:17:17:637:0:0:0,-5.11751,-10 0/0:25.1069:7:7:255:0:0:0,-2.10721,-10 0/0:99:35:35:1289:0:0:0,-10,-10 0/0:67.5865:39:38:1385:1:38:0,-6.34911,-10 0/0:34.1378:10:10:341:0:0:0,-3.0103,-10 0/0:19.0863:5:5:190:0:0:0,-1.50515,-10 0/0:46.179:14:14:532:0:0:0,-4.21442,-10 0/0:46.179:14:14:530:0:0:0,-4.21442,-10 0/0:99:34:34:1266:0:0:0,-10,-10 0/0:99:34:34:1278:0:0:0,-10,-10 0/0:94.3416:30:30:1129:0:0:0,-9.0309,-10 0/0:37.1481:11:11:407:0:0:0,-3.31133,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:34.1378:10:10:357:0:0:0,-3.0103,-10 0/0:55.2099:17:17:640:0:0:0,-5.11751,-10 0/0:91.3324:29:29:1033:0:0:0,-8.72987,-10 0/0:52.1996:16:16:607:0:0:0,-4.81648,-10 0/1:99:34:19:684:15:567:-10,0,-10 0/0:37.1481:11:11:394:0:0:0,-3.31133,-10 0/0:64.2408:20:20:719:0:0:0,-6.0206,-10 0/0:70.2614:22:22:785:0:0:0,-6.62266,-10 0/1:99:31:19:706:12:447:-10,0,-10 0/0:49.1893:15:15:539:0:0:0,-4.51545,-10 0/0:28.1172:8:8:300:0:0:0,-2.40824,-10 0/0:55.2099:17:17:634:0:0:0,-5.11751,-10 0/0:99:32:32:1169:0:0:0,-9.63296,-10 0/0:13.0657:3:3:114:0:0:0,-0.90309,-10 0/0:25.1069:7:7:243:0:0:0,-2.10721,-10 0/0:67.2511:21:21:786:0:0:0,-6.32163,-10 0/0:43.1687:13:13:458:0:0:0,-3.91339,-10 0/0:55.2099:17:17:604:0:0:0,-5.11751,-10 0/0:46.179:14:14:527:0:0:0,-4.21442,-10 0/0:40.1584:12:12:447:0:0:0,-3.61236,-10 0/0:88.3226:28:28:1004:0:0:0,-8.42884,-10 0/0:67.2511:21:21:769:0:0:0,-6.32163,-10 0/0:31.1275:9:9:339:0:0:0,-2.70927,-10 0/0:24.5406:24:23:846:1:38:0,-2.04451,-10 0/0:70.2614:22:22:791:0:0:0,-6.62266,-10 0/0:64.2408:20:20:693:0:0:0,-6.0206,-10 0/0:88.3226:28:28:1034:0:0:0,-8.42884,-10 0/0:67.2511:21:21:737:0:0:0,-6.32163,-10 0/0:43.1687:14:13:482:0:0:0,-3.91339,-10 0/0:99:40:40:1488:0:0:0,-10,-10 0/0:97.355:31:31:1125:0:0:0,-9.33193,-10 0/0:61.2305:19:19:705:0:0:0,-5.71957,-10 0/0:99:38:38:1398:0:0:0,-10,-10 0/0:52.1996:16:16:593:0:0:0,-4.81648,-10 0/1:99:37:15:495:22:777:-10,0,-10 0/0:49.1893:15:15:527:0:0:0,-4.51545,-10 0/0:16.076:4:4:129:0:0:0,-1.20412,-10 0/0:99:42:42:1543:0:0:0,-10,-10 0/0:46.179:14:14:497:0:0:0,-4.21442,-10 0/0:64.2408:20:20:750:0:0:0,-6.0206,-10 0/0:46.179:14:14:506:0:0:0,-4.21442,-10 0/0:64.2408:20:20:732:0:0:0,-6.0206,-10 0/0:58.2202:18:18:662:0:0:0,-5.41854,-10 0/0:99:37:37:1356:0:0:0,-10,-10 0/0:85.3126:27:27:991:0:0:0,-8.12781,-10 0/0:99:42:42:1520:0:0:0,-10,-10 0/0:67.2511:21:21:761:0:0:0,-6.32163,-10 0/0:67.2511:21:21:787:0:0:0,-6.32163,-10 0/0:79.2922:25:25:941:0:0:0,-7.52575,-10 0/0:58.2202:18:18:615:0:0:0,-5.41854,-10 0/0:40.1584:12:12:453:0:0:0,-3.61236,-10 0/0:99:32:32:1118:0:0:0,-9.63296,-10 0/0:25.1069:7:7:265:0:0:0,-2.10721,-10 0/0:46.179:14:14:513:0:0:0,-4.21442,-10 0/0:82.3024:26:26:938:0:0:0,-7.82678,-10 0/0:82.3024:26:26:957:0:0:0,-7.82678,-10 0/0:46.179:14:14:508:0:0:0,-4.21442,-10 0/0:79.2922:25:25:914:0:0:0,-7.52575,-10 0/0:40.1584:12:12:456:0:0:0,-3.61236,-10 0/0:64.2408:20:20:689:0:0:0,-6.0206,-10 0/0:40.1584:12:12:452:0:0:0,-3.61236,-10 0/0:19.0863:5:5:190:0:0:0,-1.50515,-10 0/0:28.1172:8:8:302:0:0:0,-2.40824,-10 0/0:99:33:33:1226:0:0:0,-9.93399,-10 0/0:94.3416:30:30:1122:0:0:0,-9.0309,-10 0/0:70.2614:22:22:798:0:0:0,-6.62266,-10 0/0:79.2922:25:25:888:0:0:0,-7.52575,-10 0/0:97.355:31:31:1130:0:0:0,-9.33193,-10 0/0:13.0657:3:3:113:0:0:0,-0.90309,-10 0/0:58.2202:18:18:660:0:0:0,-5.41854,-10 0/0:46.179:14:14:502:0:0:0,-4.21442,-10 0/0:25.1069:7:7:261:0:0:0,-2.10721,-10 0/0:76.2819:24:24:903:0:0:0,-7.22472,-10 0/0:67.2511:21:21:775:0:0:0,-6.32163,-10 0/0:52.1996:16:16:511:0:0:0,-4.81648,-10 scaffold_510 138127 . AT A 116.715 . AB=0.291667;ABP=12.0581;AC=1;AF=0.00543478;AN=184;AO=8;CIGAR=1M1D1M;DP=1911;DPB=1908.33;DPRA=1.3835;EPP=4.09604;EPPR=10.1694;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9842;NS=92;NUMALT=1;ODDS=12.815;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=278;QR=68445;RO=1893;RPP=20.3821;RPPR=4113.61;RUN=1;SAF=5;SAP=4.09604;SAR=3;SRF=907;SRP=10.1694;SRR=986;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:94.7866:15:15:546:0:0:0,-4.51545,-10 0|0:73.7167:8:8:290:0:0:0,-2.40824,-10 0|0:99:24:24:831:0:0:0,-7.22472,-10 0|0:88.7676:13:13:470:0:0:0,-3.91339,-10 0|0:94.7866:15:15:539:0:0:0,-4.51545,-10 0|0:99:17:17:621:0:0:0,-5.11751,-10 0|0:99:44:44:1599:0:0:0,-10,-10 0|0:99:28:28:996:0:0:0,-8.42884,-10 0|0:99:17:17:615:0:0:0,-5.11751,-10 0|0:55.6549:2:2:76:0:0:0,-0.60206,-7.22 0|0:64.6858:5:5:176:0:0:0,-1.50515,-10 0|0:79.7372:10:10:375:0:0:0,-3.0103,-10 0|0:99:37:37:1366:0:0:0,-10,-10 0|0:99:34:34:1246:0:0:0,-10,-10 0|0:99:29:29:1079:0:0:0,-8.72987,-10 0|1:99:24:17:619:7:240:-10,0,-10 0|0:99:33:33:1205:0:0:0,-9.93399,-10 0|0:91.7774:14:14:511:0:0:0,-4.21442,-10 0|0:99:17:17:622:0:0:0,-5.11751,-10 0|0:99:45:45:1631:0:0:0,-10,-10 0|0:99:29:29:1015:0:0:0,-8.72987,-10 0|0:99:30:30:1076:0:0:0,-9.0309,-10 0|0:82.7474:11:11:386:0:0:0,-3.31133,-10 0|0:99:23:23:815:0:0:0,-6.92369,-10 0|0:79.7372:11:10:371:0:0:0,-3.0103,-10 0|0:99:20:20:737:0:0:0,-6.0206,-10 0|0:91.7774:14:14:500:0:0:0,-4.21442,-10 0|0:99:20:20:717:0:0:0,-6.0206,-10 0|0:99:22:22:772:0:0:0,-6.62266,-10 0|0:99:31:31:1123:0:0:0,-9.33193,-10 0|0:76.727:9:9:328:0:0:0,-2.70927,-10 0|0:70.7064:7:7:231:0:0:0,-2.10721,-10 0|0:99:21:21:758:0:0:0,-6.32163,-10 0|0:79.7372:10:10:374:0:0:0,-3.0103,-10 0|0:99:24:24:879:0:0:0,-7.22472,-10 0|0:58.6652:3:3:90:0:0:0,-0.90309,-8.4 0|0:67.6961:6:6:217:0:0:0,-1.80618,-10 0|0:99:29:29:1051:0:0:0,-8.72987,-10 0|0:97.7947:16:16:571:0:0:0,-4.81648,-10 0|0:85.7576:12:12:431:0:0:0,-3.61236,-10 0|0:99:29:27:997:0:0:0,-8.12781,-10 0|0:99:19:19:712:0:0:0,-5.71957,-10 0|0:99:29:29:1016:0:0:0,-8.72987,-10 0|0:99:40:38:1383:0:0:0,-10,-10 0|0:99:28:28:995:0:0:0,-8.42884,-10 0|0:99:23:23:841:0:0:0,-6.92369,-10 0|0:99:34:34:1250:0:0:0,-10,-10 0|0:99:29:29:1044:0:0:0,-8.72987,-10 0|0:94.7866:15:15:546:0:0:0,-4.51545,-10 0|0:99:39:39:1423:0:0:0,-10,-10 0|0:85.7576:12:12:448:0:0:0,-3.61236,-10 0|0:99:36:36:1315:0:0:0,-10,-10 0|0:82.7474:11:11:402:0:0:0,-3.31133,-10 0|0:79.7372:10:10:365:0:0:0,-3.0103,-10 0|0:99:47:47:1671:0:0:0,-10,-10 0|0:76.727:9:9:315:0:0:0,-2.70927,-10 0|0:99:23:23:850:0:0:0,-6.92369,-10 0|0:82.7474:11:11:385:0:0:0,-3.31133,-10 0|0:99:25:25:924:0:0:0,-7.52575,-10 0|0:94.7866:15:15:538:0:0:0,-4.51545,-10 0|0:99:34:33:1173:0:0:0,-9.93399,-10 0|0:94.7866:15:15:513:0:0:0,-4.51545,-10 0|0:99:47:47:1670:0:0:0,-10,-10 0|0:99:25:25:930:0:0:0,-7.52575,-10 0|0:82.7474:11:11:395:0:0:0,-3.31133,-10 0|0:99:23:22:803:0:0:0,-6.62266,-10 0|0:97.7947:16:16:585:0:0:0,-4.81648,-10 0|0:70.7064:7:7:265:0:0:0,-2.10721,-10 0|0:96.6132:33:32:1186:1:38:0,-4.61548,-10 0|0:88.7676:13:13:464:0:0:0,-3.91339,-10 0|0:99:20:20:707:0:0:0,-6.0206,-10 0|0:99:39:39:1441:0:0:0,-10,-10 0|0:99:25:25:897:0:0:0,-7.52575,-10 0|0:79.7372:10:10:371:0:0:0,-3.0103,-10 0|0:99:30:27:956:0:0:0,-8.12781,-10 0|0:82.7474:11:11:402:0:0:0,-3.31133,-10 0|0:79.7372:10:10:363:0:0:0,-3.0103,-10 0|0:97.7947:16:16:592:0:0:0,-4.81648,-10 0|0:64.6858:5:5:186:0:0:0,-1.50515,-10 0|0:82.7474:11:11:405:0:0:0,-3.31133,-10 0|0:99:37:37:1307:0:0:0,-10,-10 0|0:99:38:38:1390:0:0:0,-10,-10 0|0:99:25:25:915:0:0:0,-7.52575,-10 0|0:85.7576:12:12:425:0:0:0,-3.61236,-10 0|0:99:25:25:909:0:0:0,-7.52575,-10 0|0:67.6961:6:6:190:0:0:0,-1.80618,-10 0|0:99:23:23:813:0:0:0,-6.92369,-10 0|0:88.7676:13:13:460:0:0:0,-3.91339,-10 0|0:85.7576:12:12:438:0:0:0,-3.61236,-10 0|0:99:18:18:640:0:0:0,-5.41854,-10 0|0:99:18:18:647:0:0:0,-5.41854,-10 0|0:99:20:20:732:0:0:0,-6.0206,-10 scaffold_543 40113 . C T 1998.05 . AB=0.477419;ABP=3.69677;AC=5;AF=0.0271739;AN=184;AO=74;CIGAR=1X;DP=2631;DPB=2631;DPRA=1.08926;EPP=3.12768;EPPR=3.7245;GTI=1;LEN=1;MEANALT=1;MQM=58.8649;MQMR=59.9969;NS=92;NUMALT=1;ODDS=10.0074;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2687;QR=93130;RO=2557;RPP=163.699;RPPR=5555.47;RUN=1;SAF=36;SAP=3.12768;SAR=38;SRF=1293;SRP=3.7245;SRR=1264;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:94.6368:24:24:870:0:0:0,-7.22472,-10 0/0:70.5552:16:16:599:0:0:0,-4.81648,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:76.5758:18:18:653:0:0:0,-5.41854,-10 0/0:46.4728:8:8:296:0:0:0,-2.40824,-10 0/0:52.4934:10:10:378:0:0:0,-3.0103,-10 0/0:99:54:54:1989:0:0:0,-10,-10 0/0:99:37:37:1375:0:0:0,-10,-10 0/0:97.6463:25:25:905:0:0:0,-7.52575,-10 0/0:43.4625:7:7:263:0:0:0,-2.10721,-10 0/1:5.90106e-05:4:0:0:4:152:-10,-1.20412,0 0/0:49.4831:9:9:342:0:0:0,-2.70927,-10 0/1:99:41:23:829:18:671:-10,0,-10 0/1:99:55:28:1008:27:971:-10,0,-10 0/0:99:37:37:1377:0:0:0,-10,-10 0/1:99:30:17:634:13:451:-10,0,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:76.5758:18:18:622:0:0:0,-5.41854,-10 0/1:99:25:13:477:12:442:-10,0,-10 0/0:99:54:54:1875:0:0:0,-10,-10 0/0:99:31:31:1134:0:0:0,-9.33193,-10 0/0:99:50:50:1791:0:0:0,-10,-10 0/0:52.4934:10:10:375:0:0:0,-3.0103,-10 0/0:99:45:45:1641:0:0:0,-10,-10 0/0:97.6463:25:25:916:0:0:0,-7.52575,-10 0/0:99:33:33:1181:0:0:0,-9.93399,-10 0/0:76.5758:18:18:677:0:0:0,-5.41854,-10 0/0:85.6066:21:21:791:0:0:0,-6.32163,-10 0/0:99:33:33:1209:0:0:0,-9.93399,-10 0/0:99:38:38:1399:0:0:0,-10,-10 0/0:61.5243:13:13:472:0:0:0,-3.91339,-10 0/0:43.4625:7:7:263:0:0:0,-2.10721,-10 0/0:97.6463:25:25:914:0:0:0,-7.52575,-10 0/0:58.514:12:12:448:0:0:0,-3.61236,-10 0/0:99:29:29:1040:0:0:0,-8.72987,-10 0/0:61.5243:13:13:494:0:0:0,-3.91339,-10 0/0:61.5243:13:13:484:0:0:0,-3.91339,-10 0/0:99:45:45:1639:0:0:0,-10,-10 0/0:99:30:30:1071:0:0:0,-9.0309,-10 0/0:82.5964:20:20:738:0:0:0,-6.0206,-10 0/0:99:42:42:1531:0:0:0,-10,-10 0/0:82.5964:20:20:700:0:0:0,-6.0206,-10 0/0:94.6368:24:24:859:0:0:0,-7.22472,-10 0/0:99:53:53:1977:0:0:0,-10,-10 0/0:99:40:40:1393:0:0:0,-10,-10 0/0:85.6066:21:21:771:0:0:0,-6.32163,-10 0/0:99:70:70:2534:0:0:0,-10,-10 0/0:99:38:38:1350:0:0:0,-10,-10 0/0:97.6463:25:25:896:0:0:0,-7.52575,-10 0/0:99:53:53:1983:0:0:0,-10,-10 0/0:55.5037:11:11:413:0:0:0,-3.31133,-10 0/0:99:58:58:2127:0:0:0,-10,-10 0/0:82.5964:20:20:741:0:0:0,-6.0206,-10 0/0:46.4728:8:8:290:0:0:0,-2.40824,-10 0/0:99:39:39:1473:0:0:0,-10,-10 0/0:79.5861:19:19:706:0:0:0,-5.71957,-10 0/0:99:26:26:950:0:0:0,-7.82678,-10 0/0:46.4728:8:8:289:0:0:0,-2.40824,-10 0/0:61.5243:13:13:491:0:0:0,-3.91339,-10 0/0:76.5758:18:18:672:0:0:0,-5.41854,-10 0/0:99:45:45:1650:0:0:0,-10,-10 0/0:99:35:35:1301:0:0:0,-10,-10 0/0:99:60:60:2178:0:0:0,-10,-10 0/0:99:37:37:1292:0:0:0,-10,-10 0/0:88.6168:22:22:821:0:0:0,-6.62266,-10 0/0:99:48:48:1756:0:0:0,-10,-10 0/0:99:41:41:1521:0:0:0,-10,-10 0/0:64.5346:14:14:512:0:0:0,-4.21442,-10 0/0:99:59:59:2171:0:0:0,-10,-10 0/0:67.5449:15:15:533:0:0:0,-4.51545,-10 0/0:97.6463:25:25:922:0:0:0,-7.52575,-10 0/0:99:43:43:1497:0:0:0,-10,-10 0/0:99:35:35:1216:0:0:0,-10,-10 0/0:99:32:32:1151:0:0:0,-9.63296,-10 0/0:99:43:43:1557:0:0:0,-10,-10 0/0:99:28:28:1027:0:0:0,-8.42884,-10 0/0:91.6269:23:23:854:0:0:0,-6.92369,-10 0/0:76.5758:18:18:632:0:0:0,-5.41854,-10 0/0:49.4831:9:9:342:0:0:0,-2.70927,-10 0/0:76.5758:18:18:650:0:0:0,-5.41854,-10 0/0:99:54:54:1957:0:0:0,-10,-10 0/0:99:44:44:1584:0:0:0,-10,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:99:38:38:1361:0:0:0,-10,-10 0/0:99:38:38:1345:0:0:0,-10,-10 0/0:58.514:12:12:411:0:0:0,-3.61236,-10 0/0:99:26:26:949:0:0:0,-7.82678,-10 0/0:79.5861:19:19:722:0:0:0,-5.71957,-10 0/0:43.4625:7:7:261:0:0:0,-2.10721,-10 0/0:73.5655:17:17:608:0:0:0,-5.11751,-10 0/0:99:31:31:1139:0:0:0,-9.33193,-10 0/0:73.5655:17:17:630:0:0:0,-5.11751,-10 scaffold_543 67067 . A G 316.564 . AB=0.40625;ABP=5.45321;AC=1;AF=0.00543478;AN=184;AO=15;CIGAR=1X;DP=2016;DPB=2016;DPRA=1.20995;EPP=6.62942;EPPR=4.41741;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.965;NS=92;NUMALT=1;ODDS=9.24243;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=510;QR=73239;RO=2000;RPP=35.5824;RPPR=4345.96;RUN=1;SAF=5;SAP=6.62942;SAR=10;SRF=982;SRP=4.41741;SRR=1018;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:88.3048:18:18:645:0:0:0,-5.41854,-10 0/0:58.202:8:8:257:0:0:0,-2.40824,-10 0/0:94.3246:20:20:692:0:0:0,-6.0206,-10 0/0:85.2946:17:17:572:0:0:0,-5.11751,-10 0/0:85.2946:17:17:642:0:0:0,-5.11751,-10 0/0:58.202:8:8:304:0:0:0,-2.40824,-10 0/0:99:42:42:1542:0:0:0,-10,-10 0/0:99:23:23:823:0:0:0,-6.92369,-10 0/0:82.2844:16:16:604:0:0:0,-4.81648,-10 0/0:46.1608:4:4:128:0:0:0,-1.20412,-10 0/0:61.2123:9:9:337:0:0:0,-2.70927,-10 0/0:46.1608:4:4:152:0:0:0,-1.20412,-10 0/0:91.3148:19:19:679:0:0:0,-5.71957,-10 0/0:99:36:36:1349:0:0:0,-10,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:99:24:24:878:0:0:0,-7.22472,-10 0/1:99:32:19:704:13:480:-10,0,-10 0/0:73.2535:13:13:494:0:0:0,-3.91339,-10 0/0:85.2946:17:17:594:0:0:0,-5.11751,-10 0/0:99:37:37:1360:0:0:0,-10,-10 0/0:99:26:26:985:0:0:0,-7.82678,-10 0/0:99:27:27:1002:0:0:0,-8.12781,-10 0/0:64.2226:10:10:376:0:0:0,-3.0103,-10 0/0:99:29:29:1093:0:0:0,-8.72987,-10 0/0:99:28:28:981:0:0:0,-8.42884,-10 0/0:99:38:38:1347:0:0:0,-10,-10 0/0:97.3339:21:21:753:0:0:0,-6.32163,-10 0/0:85.2946:17:17:589:0:0:0,-5.11751,-10 0/0:97.3339:21:21:782:0:0:0,-6.32163,-10 0/0:99:41:41:1500:0:0:0,-10,-10 0/0:55.1917:7:7:239:0:0:0,-2.10721,-10 0/0:64.2226:10:10:379:0:0:0,-3.0103,-10 0/0:99:25:25:920:0:0:0,-7.52575,-10 0/0:61.2123:9:9:338:0:0:0,-2.70927,-10 0/0:99:25:25:930:0:0:0,-7.52575,-10 0/0:52.1814:6:6:223:0:0:0,-1.80618,-10 0/0:61.242:17:16:576:1:15:0,-2.38706,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:79.2741:15:15:537:0:0:0,-4.51545,-10 0/0:99:25:25:937:0:0:0,-7.52575,-10 0/0:97.9068:30:29:1069:1:15:0,-6.05378,-10 0/0:99:31:31:1146:0:0:0,-9.33193,-10 0/0:88.3048:18:18:656:0:0:0,-5.41854,-10 0/0:99:38:38:1385:0:0:0,-10,-10 0/0:99:28:28:1051:0:0:0,-8.42884,-10 0/0:67.2329:11:11:414:0:0:0,-3.31133,-10 0/0:99:55:55:2072:0:0:0,-10,-10 0/0:99:33:33:1228:0:0:0,-9.93399,-10 0/0:88.3048:18:18:655:0:0:0,-5.41854,-10 0/0:99:26:26:905:0:0:0,-7.82678,-10 0/0:55.1917:7:7:266:0:0:0,-2.10721,-10 0/0:99:40:40:1470:0:0:0,-10,-10 0/0:82.2844:16:16:553:0:0:0,-4.81648,-10 0/0:67.2329:11:11:398:0:0:0,-3.31133,-10 0/0:99:38:38:1404:0:0:0,-10,-10 0/0:76.2638:14:14:525:0:0:0,-4.21442,-10 0/0:99:32:32:1160:0:0:0,-9.63296,-10 0/0:40.1402:2:2:76:0:0:0,-0.60206,-7.22 0/0:94.3246:20:20:723:0:0:0,-6.0206,-10 0/0:73.2535:13:13:470:0:0:0,-3.91339,-10 0/0:99:40:40:1489:0:0:0,-10,-10 0/0:97.3339:21:21:779:0:0:0,-6.32163,-10 0/0:99:32:32:1166:0:0:0,-9.63296,-10 0/0:76.2638:14:14:525:0:0:0,-4.21442,-10 0/0:82.2844:16:16:566:0:0:0,-4.81648,-10 0/0:99:26:26:972:0:0:0,-7.82678,-10 0/0:99:28:28:1040:0:0:0,-8.42884,-10 0/0:76.2638:14:14:497:0:0:0,-4.21442,-10 0/0:99:48:48:1695:0:0:0,-10,-10 0/0:85.2946:17:17:638:0:0:0,-5.11751,-10 0/0:85.2946:17:17:630:0:0:0,-5.11751,-10 0/0:99:33:33:1239:0:0:0,-9.93399,-10 0/0:99:40:40:1438:0:0:0,-10,-10 0/0:97.3339:21:21:751:0:0:0,-6.32163,-10 0/0:99:38:38:1367:0:0:0,-10,-10 0/0:99:22:22:818:0:0:0,-6.62266,-10 0/0:94.3246:20:20:755:0:0:0,-6.0206,-10 0/0:70.2432:12:12:450:0:0:0,-3.61236,-10 0/0:58.202:8:8:293:0:0:0,-2.40824,-10 0/0:58.202:8:8:303:0:0:0,-2.40824,-10 0/0:99:29:29:1063:0:0:0,-8.72987,-10 0/0:99:35:35:1289:0:0:0,-10,-10 0/0:99:22:22:815:0:0:0,-6.62266,-10 0/0:99:23:23:848:0:0:0,-6.92369,-10 0/0:99:27:27:984:0:0:0,-8.12781,-10 0/0:49.1711:5:5:177:0:0:0,-1.50515,-10 0/0:99:26:25:945:0:0:0,-7.52575,-10 0/0:99:22:22:833:0:0:0,-6.62266,-10 0/0:46.1608:4:4:152:0:0:0,-1.20412,-10 0/0:70.2432:12:12:456:0:0:0,-3.61236,-10 0/0:70.2432:12:12:456:0:0:0,-3.61236,-10 0/0:85.2946:17:17:576:0:0:0,-5.11751,-10 scaffold_543 69932 . C A 1194.38 . AB=0.597403;ABP=9.35551;AC=3;AF=0.0163043;AN=184;AO=48;CIGAR=1X;DP=2224;DPB=2224;DPRA=1.26744;EPP=9.52472;EPPR=3.90843;GTI=1;LEN=1;MEANALT=1;MQM=59.9583;MQMR=59.9747;NS=92;NUMALT=1;ODDS=4.83538;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1742;QR=79031;RO=2176;RPP=107.241;RPPR=4719.45;RUN=1;SAF=18;SAP=9.52472;SAR=30;SRF=1074;SRP=3.79267;SRR=1102;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.1243:18:18:672:0:0:0,-5.41854,-10 0/0:67.114:17:17:588:0:0:0,-5.11751,-10 0/0:88.1855:24:24:861:0:0:0,-7.22472,-10 0/0:91.1952:25:25:907:0:0:0,-7.52575,-10 0/0:76.1449:20:20:722:0:0:0,-6.0206,-10 0/0:61.0934:15:15:541:0:0:0,-4.51545,-10 0/0:99:50:50:1778:0:0:0,-10,-10 0/0:99:28:28:1001:0:0:0,-8.42884,-10 0/0:61.0934:15:15:558:0:0:0,-4.51545,-10 0/0:21.9595:2:2:76:0:0:0,-0.60206,-7.22 0/0:34.0007:6:6:227:0:0:0,-1.80618,-10 0/0:46.0419:10:10:376:0:0:0,-3.0103,-10 0/0:99:46:46:1653:0:0:0,-10,-10 0/0:99:37:37:1301:0:0:0,-10,-10 0/0:99:36:36:1294:0:0:0,-10,-10 0/0:99:31:31:1114:0:0:0,-9.33193,-10 0/0:99:37:37:1338:0:0:0,-10,-10 0/0:46.0419:10:10:374:0:0:0,-3.0103,-10 0/0:73.1346:19:19:693:0:0:0,-5.71957,-10 0/0:99:42:41:1526:1:16:0,-9.42001,-10 0/0:67.114:17:17:599:0:0:0,-5.11751,-10 0/0:99:55:55:2048:0:0:0,-10,-10 0/0:43.0316:9:9:342:0:0:0,-2.70927,-10 0/0:94.2044:26:26:966:0:0:0,-7.82678,-10 0/0:82.1653:22:22:770:0:0:0,-6.62266,-10 0/0:79.1551:21:21:772:0:0:0,-6.32163,-10 0/0:99:30:30:1075:0:0:0,-9.0309,-10 0/0:94.2044:26:26:974:0:0:0,-7.82678,-10 0/0:76.1449:20:20:726:0:0:0,-6.0206,-10 0/0:99:46:46:1654:0:0:0,-10,-10 0/0:40.0213:8:8:274:0:0:0,-2.40824,-10 0/0:49.0522:11:11:413:0:0:0,-3.31133,-10 0/0:85.1755:23:23:802:0:0:0,-6.92369,-10 0/0:55.0728:13:13:464:0:0:0,-3.91339,-10 0/0:64.1037:16:16:574:0:0:0,-4.81648,-10 0/0:52.0625:12:12:434:0:0:0,-3.61236,-10 0/0:49.0522:11:11:385:0:0:0,-3.31133,-10 0/0:63.9331:32:31:1104:1:38:0,-4.32781,-10 0/0:85.1755:23:23:853:0:0:0,-6.92369,-10 0/0:70.1243:18:18:682:0:0:0,-5.41854,-10 0/0:99:44:44:1631:0:0:0,-10,-10 0/0:88.1855:24:24:852:0:0:0,-7.22472,-10 0/0:70.1243:18:18:612:0:0:0,-5.41854,-10 0/0:99:42:42:1489:0:0:0,-10,-10 0/0:99:30:30:1102:0:0:0,-9.0309,-10 0/0:70.1243:18:18:675:0:0:0,-5.41854,-10 0/0:99:51:51:1893:0:0:0,-10,-10 0/0:91.1952:25:25:903:0:0:0,-7.52575,-10 0/0:49.0522:11:11:391:0:0:0,-3.31133,-10 0/0:99:56:56:2008:0:0:0,-10,-10 0/0:67.114:17:17:594:0:0:0,-5.11751,-10 0/0:99:38:38:1437:0:0:0,-10,-10 0/0:58.0831:14:14:450:0:0:0,-4.21442,-10 0/0:34.0007:6:6:224:0:0:0,-1.80618,-10 0/0:99:47:47:1670:0:0:0,-10,-10 0/0:61.0934:15:15:523:0:0:0,-4.51545,-10 0/0:99:34:34:1210:0:0:0,-10,-10 0/0:24.9698:3:3:106:0:0:0,-0.90309,-9.89333 0/0:67.114:17:17:635:0:0:0,-5.11751,-10 0/0:76.1449:20:20:752:0:0:0,-6.0206,-10 0/0:99:50:50:1852:0:0:0,-10,-10 0/0:91.1952:25:25:920:0:0:0,-7.52575,-10 0/0:99:48:48:1761:0:0:0,-10,-10 0/0:85.1755:23:23:782:0:0:0,-6.92369,-10 0/0:70.1243:18:18:637:0:0:0,-5.41854,-10 0/0:99:33:33:1185:0:0:0,-9.93399,-10 0/0:82.1653:22:22:790:0:0:0,-6.62266,-10 0/0:24.9698:3:3:114:0:0:0,-0.90309,-10 0/0:99:45:45:1593:0:0:0,-10,-10 0/0:55.0728:13:13:494:0:0:0,-3.91339,-10 0/0:91.1952:25:25:900:0:0:0,-7.52575,-10 0/0:99:31:31:1168:0:0:0,-9.33193,-10 0/0:99:39:39:1404:0:0:0,-10,-10 0/0:70.1243:18:18:669:0:0:0,-5.41854,-10 0/0:99:28:28:1059:0:0:0,-8.42884,-10 0/0:52.0625:12:12:405:0:0:0,-3.61236,-10 0/0:67.114:17:17:625:0:0:0,-5.11751,-10 0/0:46.0419:10:10:364:0:0:0,-3.0103,-10 0/0:34.0007:6:6:202:0:0:0,-1.80618,-10 0/1:0.0337075:13:0:0:13:493:-10,-3.91339,0 0/0:99:40:40:1503:0:0:0,-10,-10 0/1:99:49:21:770:28:1006:-10,0,-10 0/0:99:28:28:1052:0:0:0,-8.42884,-10 0/0:97.2176:27:27:993:0:0:0,-8.12781,-10 0/0:99:29:29:1092:0:0:0,-8.72987,-10 0/0:27.9801:4:4:152:0:0:0,-1.20412,-10 0/0:91.1952:25:25:919:0:0:0,-7.52575,-10 0/0:79.1551:21:21:761:0:0:0,-6.32163,-10 0/0:24.9698:3:3:113:0:0:0,-0.90309,-10 0/1:99:15:10:376:5:189:-10,0,-10 0/0:94.2044:26:26:948:0:0:0,-7.82678,-10 0/0:79.1551:21:21:760:0:0:0,-6.32163,-10 scaffold_543 120627 . C T 249.478 . AB=0.289474;ABP=17.6392;AC=1;AF=0.00543478;AN=184;AO=12;CIGAR=1X;DP=1898;DPB=1898;DPRA=1.64664;EPP=5.9056;EPPR=3.02874;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9857;NS=92;NUMALT=1;ODDS=10.6862;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=420;QR=66390;RO=1884;RPP=29.068;RPPR=3964.81;RUN=1;SAF=8;SAP=5.9056;SAR=4;SRF=955;SRP=3.78945;SRR=929;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:70.4926:11:11:401:0:0:0,-3.31133,-10 0/0:70.4926:11:11:376:0:0:0,-3.31133,-10 0/0:99:27:27:969:0:0:0,-8.12781,-10 0/0:88.554:17:17:605:0:0:0,-5.11751,-10 0/0:76.5132:13:13:439:0:0:0,-3.91339,-10 0/0:64.472:9:9:334:0:0:0,-2.70927,-10 0/0:99:52:52:1870:0:0:0,-10,-10 0/0:99:40:40:1372:0:0:0,-10,-10 0/0:46.4102:3:3:113:0:0:0,-0.90309,-10 0/0:55.4411:6:6:201:0:0:0,-1.80618,-10 0/0:58.4514:7:7:229:0:0:0,-2.10721,-10 0/0:49.4205:4:4:145:0:0:0,-1.20412,-10 0/1:99:38:27:962:11:418:-10,0,-10 0/0:99:33:33:1145:0:0:0,-9.93399,-10 0/0:99:26:26:884:0:0:0,-7.82678,-10 0/0:99:31:31:1095:0:0:0,-9.33193,-10 0/0:99:23:23:840:0:0:0,-6.92369,-10 0/0:67.4823:11:10:352:0:0:0,-3.0103,-10 0/0:99:22:22:801:0:0:0,-6.62266,-10 0/0:99:52:52:1862:0:0:0,-10,-10 0/0:79.5234:14:14:515:0:0:0,-4.21442,-10 0/0:99:29:28:1009:1:2:0,-7.06747,-10 0/0:52.4308:5:5:162:0:0:0,-1.50515,-10 0/0:82.5337:15:15:509:0:0:0,-4.51545,-10 0/0:94.5735:19:19:627:0:0:0,-5.71957,-10 0/0:94.5735:19:19:629:0:0:0,-5.71957,-10 0/0:99:21:21:732:0:0:0,-6.32163,-10 0/0:58.4514:7:7:258:0:0:0,-2.10721,-10 0/0:85.5439:16:16:560:0:0:0,-4.81648,-10 0/0:99:34:34:1230:0:0:0,-10,-10 0/0:73.5029:12:12:386:0:0:0,-3.61236,-10 0/0:79.5234:14:14:451:0:0:0,-4.21442,-10 0/0:99:28:28:951:0:0:0,-8.42884,-10 0/0:91.5639:18:18:645:0:0:0,-5.41854,-10 0/0:82.5337:15:15:564:0:0:0,-4.51545,-10 0/0:46.4102:3:3:90:0:0:0,-0.90309,-8.4 0/0:82.5337:15:15:546:0:0:0,-4.51545,-10 0/0:99:24:24:835:0:0:0,-7.22472,-10 0/0:88.554:17:17:598:0:0:0,-5.11751,-10 0/0:99:21:21:729:0:0:0,-6.32163,-10 0/0:99:35:35:1227:0:0:0,-10,-10 0/0:99:36:36:1165:0:0:0,-10,-10 0/0:99:21:21:736:0:0:0,-6.32163,-10 0/0:99:31:31:1064:0:0:0,-9.33193,-10 0/0:99:28:28:938:0:0:0,-8.42884,-10 0/0:79.5234:14:14:516:0:0:0,-4.21442,-10 0/0:99:41:41:1412:0:0:0,-10,-10 0/0:99:33:33:1222:0:0:0,-9.93399,-10 0/0:99:22:22:819:0:0:0,-6.62266,-10 0/0:99:49:48:1747:0:0:0,-10,-10 0/0:67.4823:10:10:362:0:0:0,-3.0103,-10 0/0:99:42:42:1501:0:0:0,-10,-10 0/0:73.5029:12:12:444:0:0:0,-3.61236,-10 0/0:61.4617:8:8:249:0:0:0,-2.40824,-10 0/0:99:45:45:1645:0:0:0,-10,-10 0/0:61.4617:8:8:266:0:0:0,-2.40824,-10 0/0:99:21:21:778:0:0:0,-6.32163,-10 0/0:55.4411:6:6:195:0:0:0,-1.80618,-10 0/0:99:24:24:842:0:0:0,-7.22472,-10 0/0:67.4823:10:10:343:0:0:0,-3.0103,-10 0/0:99:37:37:1349:0:0:0,-10,-10 0/0:99:22:22:800:0:0:0,-6.62266,-10 0/0:99:33:33:1106:0:0:0,-9.93399,-10 0/0:97.5823:20:20:676:0:0:0,-6.0206,-10 0/0:64.472:9:9:339:0:0:0,-2.70927,-10 0/0:82.5337:15:15:538:0:0:0,-4.51545,-10 0/0:88.554:17:17:630:0:0:0,-5.11751,-10 0/0:76.5132:13:13:473:0:0:0,-3.91339,-10 0/0:99:36:36:1247:0:0:0,-10,-10 0/0:91.5639:18:18:625:0:0:0,-5.41854,-10 0/0:91.5639:18:18:650:0:0:0,-5.41854,-10 0/0:99:28:28:959:0:0:0,-8.42884,-10 0/0:99:27:27:942:0:0:0,-8.12781,-10 0/0:99:21:21:762:0:0:0,-6.32163,-10 0/0:99:30:30:1096:0:0:0,-9.0309,-10 0/0:76.5132:13:13:466:0:0:0,-3.91339,-10 0/0:99:21:21:741:0:0:0,-6.32163,-10 0/0:94.5735:19:19:667:0:0:0,-5.71957,-10 0/0:55.4411:6:6:199:0:0:0,-1.80618,-10 0/0:70.4926:11:11:387:0:0:0,-3.31133,-10 0/0:99:37:37:1240:0:0:0,-10,-10 0/0:99:26:26:884:0:0:0,-7.82678,-10 0/0:99:23:23:837:0:0:0,-6.92369,-10 0/0:82.5337:15:15:557:0:0:0,-4.51545,-10 0/0:99:22:22:773:0:0:0,-6.62266,-10 0/0:55.4411:6:6:217:0:0:0,-1.80618,-10 0/0:85.5439:16:16:526:0:0:0,-4.81648,-10 0/0:79.5234:14:14:504:0:0:0,-4.21442,-10 0/0:49.4205:4:4:152:0:0:0,-1.20412,-10 0/0:79.5234:14:14:506:0:0:0,-4.21442,-10 0/0:79.5234:14:14:529:0:0:0,-4.21442,-10 0/0:82.5337:15:15:521:0:0:0,-4.51545,-10 scaffold_543 142023 . C T 1350.1 . AB=0.885246;ABP=81.6461;AC=5;AF=0.0274725;AN=182;AO=54;CIGAR=1X;DP=1308;DPB=1308;DPRA=0.841379;EPP=3.6537;EPPR=11.7464;GTI=4;LEN=1;MEANALT=1;MQM=60;MQMR=59.9864;NS=91;NUMALT=1;ODDS=1.34402;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2012;QR=45964;RO=1253;RPP=120.27;RPPR=2723.87;RUN=1;SAF=29;SAP=3.6537;SAR=25;SRF=662;SRP=11.7464;SRR=591;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:26.9929:6:6:205:0:0:0,-1.80618,-10 0/0:20.9723:4:4:149:0:0:0,-1.20412,-10 0/0:36.0238:9:9:338:0:0:0,-2.70927,-10 0/0:60.1062:17:17:643:0:0:0,-5.11751,-10 0/0:23.9826:5:5:190:0:0:0,-1.50515,-10 0/0:17.962:3:3:114:0:0:0,-0.90309,-10 0/0:99:31:30:1134:0:0:0,-9.0309,-10 0/0:60.1062:17:17:637:0:0:0,-5.11751,-10 0/0:51.0753:14:14:501:0:0:0,-4.21442,-10 0/0:14.9517:2:2:46:0:0:0,-0.60206,-4.37 0/0:39.0341:10:10:355:0:0:0,-3.0103,-10 0/0:30.0032:7:7:266:0:0:0,-2.10721,-10 0/0:72.1474:21:21:771:0:0:0,-6.32163,-10 0/0:66.1268:19:19:704:0:0:0,-5.71957,-10 0/0:75.1577:22:22:828:0:0:0,-6.62266,-10 0/0:51.0753:14:14:485:0:0:0,-4.21442,-10 0/0:48.065:13:13:447:0:0:0,-3.91339,-10 0/0:26.9929:6:6:219:0:0:0,-1.80618,-10 0/0:63.1165:18:18:674:0:0:0,-5.41854,-10 0/0:87.1989:26:26:946:0:0:0,-7.82678,-10 0/0:57.0959:16:16:571:0:0:0,-4.81648,-10 0/1:99:19:7:231:12:452:-10,0,-10 0/0:26.9929:6:6:206:0:0:0,-1.80618,-10 0/0:51.0753:14:14:515:0:0:0,-4.21442,-10 0/0:57.0959:16:16:600:0:0:0,-4.81648,-10 0/0:87.1989:26:26:956:0:0:0,-7.82678,-10 0/0:36.0238:9:9:302:0:0:0,-2.70927,-10 0/0:36.0238:9:9:335:0:0:0,-2.70927,-10 0/0:45.0547:12:12:451:0:0:0,-3.61236,-10 0/0:99:37:37:1397:0:0:0,-10,-10 0/0:26.9929:6:6:192:0:0:0,-1.80618,-10 0/0:30.0032:7:7:265:0:0:0,-2.10721,-10 0/1:0.755068:13:0:0:13:486:-10,-3.91339,0 0/0:45.0547:12:12:452:0:0:0,-3.61236,-10 0/0:45.0547:12:12:452:0:0:0,-3.61236,-10 0/1:0.0108428:7:0:0:7:244:-10,-2.10721,0 0/0:60.1062:17:17:631:0:0:0,-5.11751,-10 0/0:75.1577:22:22:829:0:0:0,-6.62266,-10 0/1:0.17682:11:0:0:11:413:-10,-3.31133,0 0/0:42.0444:11:11:416:0:0:0,-3.31133,-10 0/0:93.2187:28:28:1056:0:0:0,-8.42884,-10 0/1:0.17682:11:0:0:11:417:-10,-3.31133,0 0/0:45.0547:12:12:455:0:0:0,-3.61236,-10 0/0:96.2282:29:29:1097:0:0:0,-8.72987,-10 0/0:84.1886:25:25:918:0:0:0,-7.52575,-10 0/0:72.1474:21:21:751:0:0:0,-6.32163,-10 0/0:99:30:30:1081:0:0:0,-9.0309,-10 0/0:81.1782:24:24:900:0:0:0,-7.22472,-10 0/0:20.9723:4:4:152:0:0:0,-1.20412,-10 0/0:93.2187:28:28:1017:0:0:0,-8.42884,-10 0/0:39.0341:10:10:370:0:0:0,-3.0103,-10 0/0:99:32:32:1170:0:0:0,-9.63296,-10 0/0:57.0959:16:16:605:0:0:0,-4.81648,-10 0/0:26.9929:6:6:227:0:0:0,-1.80618,-10 0/0:57.0959:16:16:524:0:0:0,-4.81648,-10 0/0:39.0341:10:10:380:0:0:0,-3.0103,-10 0/0:39.0341:10:10:379:0:0:0,-3.0103,-10 0/0:30.0032:7:7:225:0:0:0,-2.10721,-10 0/0:54.0856:15:15:555:0:0:0,-4.51545,-10 0/0:51.0753:14:14:515:0:0:0,-4.21442,-10 0/0:48.065:13:13:492:0:0:0,-3.91339,-10 0/0:48.065:13:13:489:0:0:0,-3.91339,-10 0/0:93.2187:28:28:1026:0:0:0,-8.42884,-10 0/0:45.0547:12:12:447:0:0:0,-3.61236,-10 0/0:23.9826:5:5:189:0:0:0,-1.50515,-10 0/0:60.1062:17:17:638:0:0:0,-5.11751,-10 0/0:33.0135:8:8:304:0:0:0,-2.40824,-10 0/0:23.9826:5:5:169:0:0:0,-1.50515,-10 0/0:99:40:40:1425:0:0:0,-10,-10 0/0:42.0444:11:11:411:0:0:0,-3.31133,-10 0/0:42.0444:11:11:413:0:0:0,-3.31133,-10 0/0:75.1577:22:22:830:0:0:0,-6.62266,-10 0/0:57.0959:16:16:568:0:0:0,-4.81648,-10 0/0:57.0959:16:16:568:0:0:0,-4.81648,-10 0/0:30.0032:7:7:243:0:0:0,-2.10721,-10 0/0:51.0753:14:14:520:0:0:0,-4.21442,-10 0/0:33.0135:8:8:300:0:0:0,-2.40824,-10 0/0:33.0135:8:8:302:0:0:0,-2.40824,-10 0/0:33.0135:8:8:304:0:0:0,-2.40824,-10 0/0:23.9826:5:5:160:0:0:0,-1.50515,-10 0/0:78.168:23:23:833:0:0:0,-6.92369,-10 0/0:72.1474:21:21:764:0:0:0,-6.32163,-10 0/0:66.1268:19:19:694:0:0:0,-5.71957,-10 0/0:45.0547:12:12:456:0:0:0,-3.61236,-10 0/0:66.1268:19:19:689:0:0:0,-5.71957,-10 0/0:17.962:3:3:91:0:0:0,-0.90309,-8.49333 0/0:48.065:13:13:469:0:0:0,-3.91339,-10 0/0:14.9517:2:2:69:0:0:0,-0.60206,-6.555 .:.:.:.:.:.:.:. 0/0:33.0135:8:8:299:0:0:0,-2.40824,-10 0/0:57.0959:16:16:563:0:0:0,-4.81648,-10 0/0:42.0444:11:11:409:0:0:0,-3.31133,-10 scaffold_543 142070 . T C 1226.2 . AB=0.516129;ABP=3.22044;AC=4;AF=0.021978;AN=182;AO=49;CIGAR=1X;DP=1315;DPB=1315;DPRA=1.60133;EPP=5.18177;EPPR=12.6661;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9391;NS=91;NUMALT=1;ODDS=0.559189;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1811;QR=45820;RO=1265;RPP=109.412;RPPR=2698.05;RUN=1;SAF=21;SAP=5.18177;SAR=28;SRF=664;SRP=9.8234;SRR=601;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:25.2224:6:6:204:0:0:0,-1.80618,-10 0/0:19.2018:4:4:150:0:0:0,-1.20412,-10 0/0:34.2533:9:9:335:0:0:0,-2.70927,-10 0/0:58.3357:17:17:641:0:0:0,-5.11751,-10 0/0:22.2121:5:5:190:0:0:0,-1.50515,-10 0/0:16.1915:3:3:92:0:0:0,-0.90309,-8.58667 0/0:97.4668:30:30:1108:0:0:0,-9.0309,-10 0/0:58.3357:17:17:633:0:0:0,-5.11751,-10 0/0:49.3048:14:14:505:0:0:0,-4.21442,-10 0/0:13.1812:2:2:52:0:0:0,-0.60206,-4.94 0/0:37.2636:10:10:316:0:0:0,-3.0103,-10 0/0:28.2327:7:7:260:0:0:0,-2.10721,-10 0/0:21.0659:19:18:659:1:36:0,-0.840816,-10 0/0:67.3666:20:20:736:0:0:0,-6.0206,-10 0/0:73.3872:22:22:788:0:0:0,-6.62266,-10 0/0:49.3048:14:14:507:0:0:0,-4.21442,-10 0/0:46.2945:13:13:444:0:0:0,-3.91339,-10 0/0:25.2224:6:6:197:0:0:0,-1.80618,-10 0/0:61.346:18:18:640:0:0:0,-5.41854,-10 0/0:88.4387:27:27:940:0:0:0,-8.12781,-10 0/0:58.3357:17:17:623:0:0:0,-5.11751,-10 0/0:64.3563:19:19:715:0:0:0,-5.71957,-10 0/0:25.2224:6:6:213:0:0:0,-1.80618,-10 0/0:49.3048:14:14:493:0:0:0,-4.21442,-10 0/0:55.3254:16:16:597:0:0:0,-4.81648,-10 0/1:99:26:16:578:10:356:-10,0,-10 0/0:37.2636:10:10:317:0:0:0,-3.0103,-10 0/0:34.2533:9:9:329:0:0:0,-2.70927,-10 0/0:43.2842:12:12:391:0:0:0,-3.61236,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:25.2224:6:6:196:0:0:0,-1.80618,-10 0/0:28.2327:7:7:252:0:0:0,-2.10721,-10 0/0:46.2945:13:13:461:0:0:0,-3.91339,-10 0/0:43.2842:12:12:446:0:0:0,-3.61236,-10 0/0:43.2842:12:12:427:0:0:0,-3.61236,-10 0/0:28.2327:7:7:257:0:0:0,-2.10721,-10 0/0:58.3357:17:17:619:0:0:0,-5.11751,-10 0/0:73.3872:22:22:827:0:0:0,-6.62266,-10 0/0:40.2739:11:11:417:0:0:0,-3.31133,-10 0/0:40.2739:11:11:399:0:0:0,-3.31133,-10 0/0:91.449:28:28:1041:0:0:0,-8.42884,-10 0/0:40.2739:11:11:407:0:0:0,-3.31133,-10 0/0:43.2842:12:12:434:0:0:0,-3.61236,-10 0/0:97.4668:30:30:1099:0:0:0,-9.0309,-10 0/1:99:25:11:379:14:530:-10,0,-10 0/0:70.3769:21:21:721:0:0:0,-6.32163,-10 0/0:97.4668:30:30:1119:0:0:0,-9.0309,-10 0/0:79.4077:24:24:890:0:0:0,-7.22472,-10 0/0:22.2121:5:5:183:0:0:0,-1.50515,-10 0/0:91.449:28:28:1052:0:0:0,-8.42884,-10 0/0:37.2636:10:10:353:0:0:0,-3.0103,-10 0/0:99:33:32:1122:0:0:0,-9.63296,-10 0/0:49.3048:14:14:523:0:0:0,-4.21442,-10 0/0:25.2224:6:6:220:0:0:0,-1.80618,-10 0/0:55.3254:16:16:574:0:0:0,-4.81648,-10 0/0:37.2636:10:10:363:0:0:0,-3.0103,-10 0/0:43.2842:12:12:445:0:0:0,-3.61236,-10 0/0:28.2327:7:7:192:0:0:0,-2.10721,-10 0/0:52.3151:15:15:560:0:0:0,-4.51545,-10 0/1:1.44255:14:0:0:14:512:-10,-4.21442,0 0/0:46.2945:13:13:492:0:0:0,-3.91339,-10 0/0:46.2945:13:13:480:0:0:0,-3.91339,-10 0/1:99:28:18:676:10:377:-10,0,-10 0/0:43.2842:12:12:431:0:0:0,-3.61236,-10 0/0:22.2121:5:5:186:0:0:0,-1.50515,-10 0/0:58.3357:17:17:628:0:0:0,-5.11751,-10 0/0:31.243:8:8:299:0:0:0,-2.40824,-10 0/0:22.2121:5:5:162:0:0:0,-1.50515,-10 0/0:99:40:40:1462:0:0:0,-10,-10 0/0:40.2739:11:11:409:0:0:0,-3.31133,-10 0/0:40.2739:11:11:402:0:0:0,-3.31133,-10 0/0:73.3872:22:22:816:0:0:0,-6.62266,-10 0/0:58.3357:17:17:591:0:0:0,-5.11751,-10 0/0:55.3254:16:16:570:0:0:0,-4.81648,-10 0/0:28.2327:7:7:242:0:0:0,-2.10721,-10 0/0:49.3048:14:14:520:0:0:0,-4.21442,-10 0/0:31.243:8:8:302:0:0:0,-2.40824,-10 0/0:31.243:8:8:299:0:0:0,-2.40824,-10 0/0:31.243:8:8:293:0:0:0,-2.40824,-10 0/0:22.2121:5:5:164:0:0:0,-1.50515,-10 0/0:79.4077:24:24:893:0:0:0,-7.22472,-10 0/0:70.3769:21:21:762:0:0:0,-6.32163,-10 0/0:64.3563:19:19:676:0:0:0,-5.71957,-10 0/0:43.2842:12:12:454:0:0:0,-3.61236,-10 0/0:64.3563:19:19:712:0:0:0,-5.71957,-10 0/0:16.1915:3:3:92:0:0:0,-0.90309,-8.58667 0/0:46.2945:13:13:441:0:0:0,-3.91339,-10 0/0:13.1812:2:2:68:0:0:0,-0.60206,-6.46 .:.:.:.:.:.:.:. 0/0:31.243:8:8:252:0:0:0,-2.40824,-10 0/0:58.3357:17:17:634:0:0:0,-5.11751,-10 0/0:40.2739:11:11:410:0:0:0,-3.31133,-10 scaffold_543 162029 . T C 212.687 . AB=0.333333;ABP=10.2485;AC=1;AF=0.00543478;AN=184;AO=12;CIGAR=1X;DP=1831;DPB=1831;DPRA=1.51569;EPP=29.068;EPPR=3944.23;GTI=0;LEN=1;MEANALT=1.33333;MQM=24.5833;MQMR=25.9118;NS=92;NUMALT=1;ODDS=11.0013;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=430;QR=66107;RO=1815;RPP=3.73412;RPPR=3.04021;RUN=1;SAF=5;SAP=3.73412;SAR=7;SRF=910;SRP=3.04021;SRR=905;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:21:21:776:0:0:0,-6.32163,-10 0/0:77.8813:13:13:480:0:0:0,-3.91339,-10 0/0:99:24:24:872:0:0:0,-7.22472,-10 0/0:80.8914:14:14:526:0:0:0,-4.21442,-10 0/0:71.8607:11:11:406:0:0:0,-3.31133,-10 0/0:65.8401:9:9:342:0:0:0,-2.70927,-10 0/0:99:46:46:1654:0:0:0,-10,-10 0/0:99:25:25:936:0:0:0,-7.52575,-10 0/0:86.9121:16:16:562:0:0:0,-4.81648,-10 0/0:50.7886:4:4:151:0:0:0,-1.20412,-10 0/0:62.8298:8:8:276:0:0:0,-2.40824,-10 0/0:59.8195:7:7:266:0:0:0,-2.10721,-10 0/0:99:26:25:914:0:0:0,-7.52575,-10 0/0:99:36:36:1345:0:0:0,-10,-10 0/0:99:31:31:1148:0:0:0,-9.33193,-10 0/0:99:44:44:1617:0:0:0,-10,-10 0/0:99:29:29:1028:0:0:0,-8.72987,-10 0/0:59.8195:7:7:260:0:0:0,-2.10721,-10 0/0:99:25:24:880:0:0:0,-7.22472,-10 0/0:94.5168:36:34:1162:1:38:0,-5.45698,-10 0/0:99:27:27:985:0:0:0,-8.12781,-10 0/0:99:35:35:1289:0:0:0,-10,-10 0/0:99:21:21:736:0:0:0,-6.32163,-10 0/0:99:25:25:899:0:0:0,-7.52575,-10 0/0:80.8914:15:14:506:0:0:0,-4.21442,-10 0/0:98.9522:20:20:701:0:0:0,-6.0206,-10 0/0:71.8607:11:11:394:0:0:0,-3.31133,-10 0/0:59.8195:7:7:266:0:0:0,-2.10721,-10 0/0:98.9522:20:20:722:0:0:0,-6.0206,-10 0/0:99:32:32:1171:0:0:0,-9.63296,-10 0/0:68.8504:10:10:372:0:0:0,-3.0103,-10 0/0:59.8195:7:7:262:0:0:0,-2.10721,-10 0/0:99:23:23:834:0:0:0,-6.92369,-10 0/0:71.8607:11:11:408:0:0:0,-3.31133,-10 0/0:99:27:27:961:0:0:0,-8.12781,-10 0/0:59.8195:7:7:263:0:0:0,-2.10721,-10 0/0:74.871:12:12:432:0:0:0,-3.61236,-10 0/0:99:37:37:1330:0:0:0,-10,-10 0/0:95.9386:19:19:693:0:0:0,-5.71957,-10 0/0:89.9213:17:17:639:0:0:0,-5.11751,-10 0/0:99:27:27:993:0:0:0,-8.12781,-10 0/0:57.5699:23:22:785:1:38:0,-1.76196,-10 0/0:99:21:21:763:0:0:0,-6.32163,-10 0/0:99:21:21:693:0:0:0,-6.32163,-10 0/0:80.8914:14:14:489:0:0:0,-4.21442,-10 0/0:86.9121:16:16:586:0:0:0,-4.81648,-10 0/0:99:40:40:1477:0:0:0,-10,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:74.871:12:12:406:0:0:0,-3.61236,-10 0/0:99:38:38:1375:0:0:0,-10,-10 0/0:92.9325:18:18:665:0:0:0,-5.41854,-10 0/0:99:37:37:1361:0:0:0,-10,-10 0/0:74.871:12:12:433:0:0:0,-3.61236,-10 0/0:47.7783:3:3:114:0:0:0,-0.90309,-10 0/0:99:30:30:1130:0:0:0,-9.0309,-10 0/0:71.8607:11:11:416:0:0:0,-3.31133,-10 0/0:99:21:21:796:0:0:0,-6.32163,-10 0/0:65.8401:9:9:340:0:0:0,-2.70927,-10 0/0:95.9386:19:19:661:0:0:0,-5.71957,-10 0/0:77.8813:13:13:486:0:0:0,-3.91339,-10 0/0:99:27:27:961:0:0:0,-8.12781,-10 0/0:62.8298:8:8:272:0:0:0,-2.40824,-10 0/0:99:24:24:904:0:0:0,-7.22472,-10 0/0:98.9522:20:20:725:0:0:0,-6.0206,-10 0/0:65.8401:9:9:302:0:0:0,-2.70927,-10 0/1:99:30:20:754:10:354:-10,0,-10 0/0:83.9016:15:15:540:0:0:0,-4.51545,-10 0/0:68.8504:10:10:355:0:0:0,-3.0103,-10 0/0:99:26:26:943:0:0:0,-7.82678,-10 0/0:65.8401:9:9:338:0:0:0,-2.70927,-10 0/0:83.9016:15:15:553:0:0:0,-4.51545,-10 0/0:99:29:29:1069:0:0:0,-8.72987,-10 0/0:92.9325:18:18:660:0:0:0,-5.41854,-10 0/0:77.8813:13:13:490:0:0:0,-3.91339,-10 0/0:99:28:28:1038:0:0:0,-8.42884,-10 0/0:89.9213:17:17:619:0:0:0,-5.11751,-10 0/0:99:22:22:826:0:0:0,-6.62266,-10 0/0:74.871:12:12:433:0:0:0,-3.61236,-10 0/0:59.8195:7:7:262:0:0:0,-2.10721,-10 0/0:71.8607:11:11:408:0:0:0,-3.31133,-10 0/0:99:33:33:1150:0:0:0,-9.93399,-10 0/0:99:30:30:1082:0:0:0,-9.0309,-10 0/0:99:22:22:757:0:0:0,-6.62266,-10 0/0:99:27:27:949:0:0:0,-8.12781,-10 0/0:99:31:31:1150:0:0:0,-9.33193,-10 0/0:62.8298:8:8:280:0:0:0,-2.40824,-10 0/0:80.8914:14:14:529:0:0:0,-4.21442,-10 0/0:99:21:21:787:0:0:0,-6.32163,-10 0/0:56.8092:6:6:225:0:0:0,-1.80618,-10 0/0:99:28:28:1047:0:0:0,-8.42884,-10 0/0:95.9386:19:19:684:0:0:0,-5.71957,-10 0/0:86.9121:16:16:604:0:0:0,-4.81648,-10 scaffold_552 40527 . G A 417.39 . AB=0.527778;ABP=3.25157;AC=2;AF=0.0108696;AN=184;AO=20;CIGAR=1X;DP=1634;DPB=1634;DPRA=0.936448;EPP=3.0103;EPPR=3.8517;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9826;NS=92;NUMALT=1;ODDS=5.63058;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=694;QR=58164;RO=1613;RPP=38.1882;RPPR=3350.99;RUN=1;SAF=11;SAP=3.44459;SAR=9;SRF=835;SRP=7.38421;SRR=778;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:60.9439:11:11:408:0:0:0,-3.31133,-10 0/0:45.8924:6:6:197:0:0:0,-1.80618,-10 0/0:85.0261:19:19:702:0:0:0,-5.71957,-10 0/0:57.9336:10:10:357:0:0:0,-3.0103,-10 0/0:63.9542:12:12:443:0:0:0,-3.61236,-10 0/0:51.913:8:8:303:0:0:0,-2.40824,-10 0/0:99:28:28:1011:0:0:0,-8.42884,-10 0/0:97.0691:23:23:840:0:0:0,-6.92369,-10 0/0:60.9439:11:11:401:0:0:0,-3.31133,-10 0/0:39.8718:4:4:151:0:0:0,-1.20412,-10 0/0:57.9336:10:10:371:0:0:0,-3.0103,-10 0/1:6.67453e-05:10:0:0:10:338:-10,-3.0103,0 0/0:99:36:36:1289:0:0:0,-10,-10 0/1:99:26:17:607:9:320:-10,0,-10 0/0:85.0261:19:19:710:0:0:0,-5.71957,-10 0/0:0.0155352:14:13:468:1:36:-0.531708,0,-10 0/0:99:27:27:950:0:0:0,-8.12781,-10 0/0:57.9336:10:10:377:0:0:0,-3.0103,-10 0/0:85.0261:19:19:658:0:0:0,-5.71957,-10 0/0:99:28:28:953:0:0:0,-8.42884,-10 0/0:88.0368:20:20:690:0:0:0,-6.0206,-10 0/0:99:42:42:1545:0:0:0,-10,-10 0/0:54.9233:9:9:290:0:0:0,-2.70927,-10 0/0:94.058:22:22:781:0:0:0,-6.62266,-10 0/0:99:26:26:940:0:0:0,-7.82678,-10 0/0:85.0261:19:19:646:0:0:0,-5.71957,-10 0/0:75.9954:16:16:574:0:0:0,-4.81648,-10 0/0:66.9645:13:13:437:0:0:0,-3.91339,-10 0/0:85.0261:19:19:717:0:0:0,-5.71957,-10 0/0:99:36:36:1262:0:0:0,-10,-10 0/0:75.9954:16:16:552:0:0:0,-4.81648,-10 0/0:57.9336:10:10:378:0:0:0,-3.0103,-10 0/0:91.0473:21:21:754:0:0:0,-6.32163,-10 0/0:42.8821:5:5:179:0:0:0,-1.50515,-10 0/0:72.9851:15:15:548:0:0:0,-4.51545,-10 0/0:48.9027:7:7:253:0:0:0,-2.10721,-10 0/0:63.9542:12:12:441:0:0:0,-3.61236,-10 0/0:88.0368:20:20:702:0:0:0,-6.0206,-10 0/0:85.0261:19:19:651:0:0:0,-5.71957,-10 0/0:69.9748:14:14:492:0:0:0,-4.21442,-10 0/0:99:30:30:1070:0:0:0,-9.0309,-10 0/0:75.9954:16:16:582:0:0:0,-4.81648,-10 0/0:99:28:28:1003:0:0:0,-8.42884,-10 0/0:99:34:34:1207:0:0:0,-10,-10 0/0:94.058:22:22:821:0:0:0,-6.62266,-10 0/0:72.9851:15:15:507:0:0:0,-4.51545,-10 0/0:99:45:45:1666:0:0:0,-10,-10 0/0:69.9748:14:14:528:0:0:0,-4.21442,-10 0/0:48.9027:7:7:241:0:0:0,-2.10721,-10 0/0:99:36:36:1289:0:0:0,-10,-10 0/0:72.9851:15:15:561:0:0:0,-4.51545,-10 0/0:99:33:33:1175:0:0:0,-9.93399,-10 0/0:60.9439:11:11:393:0:0:0,-3.31133,-10 0/0:33.8512:2:2:76:0:0:0,-0.60206,-7.22 0/0:99:36:35:1231:0:0:0,-10,-10 0/0:66.9645:13:13:453:0:0:0,-3.91339,-10 0/0:72.9851:15:15:522:0:0:0,-4.51545,-10 0/0:57.9336:10:10:368:0:0:0,-3.0103,-10 0/0:69.9748:14:14:481:0:0:0,-4.21442,-10 0/0:66.9645:13:13:471:0:0:0,-3.91339,-10 0/0:97.0691:23:23:866:0:0:0,-6.92369,-10 0/0:94.058:22:22:794:0:0:0,-6.62266,-10 0/0:99:26:26:978:0:0:0,-7.82678,-10 0/0:79.0058:17:17:632:0:0:0,-5.11751,-10 0/0:82.0159:18:18:675:0:0:0,-5.41854,-10 0/0:94.058:22:22:804:0:0:0,-6.62266,-10 0/0:60.9439:11:11:396:0:0:0,-3.31133,-10 0/0:48.9027:7:7:228:0:0:0,-2.10721,-10 0/0:99:39:39:1422:0:0:0,-10,-10 0/0:48.9027:7:7:261:0:0:0,-2.10721,-10 0/0:75.9954:16:16:586:0:0:0,-4.81648,-10 0/0:82.0159:18:18:674:0:0:0,-5.41854,-10 0/0:91.0473:21:21:784:0:0:0,-6.32163,-10 0/0:75.9954:16:16:601:0:0:0,-4.81648,-10 0/0:99:28:28:1023:0:0:0,-8.42884,-10 0/0:60.9439:11:11:413:0:0:0,-3.31133,-10 0/0:69.9748:14:14:510:0:0:0,-4.21442,-10 0/0:66.9645:13:13:482:0:0:0,-3.91339,-10 0/0:42.8821:5:5:186:0:0:0,-1.50515,-10 0/0:48.9027:7:7:263:0:0:0,-2.10721,-10 0/0:99:39:39:1457:0:0:0,-10,-10 0/0:97.0691:23:23:814:0:0:0,-6.92369,-10 0/0:82.0159:18:18:677:0:0:0,-5.41854,-10 0/0:72.9851:15:15:549:0:0:0,-4.51545,-10 0/0:91.0473:21:21:749:0:0:0,-6.32163,-10 0/0:42.8821:5:5:190:0:0:0,-1.50515,-10 0/0:79.0058:17:17:579:0:0:0,-5.11751,-10 0/0:54.9233:9:9:296:0:0:0,-2.70927,-10 0/0:45.8924:6:6:216:0:0:0,-1.80618,-10 0/0:69.9748:14:14:504:0:0:0,-4.21442,-10 0/0:63.9542:12:12:415:0:0:0,-3.61236,-10 0/0:66.9645:13:13:467:0:0:0,-3.91339,-10 scaffold_576 24262 . T C 3793.19 . AB=0.530201;ABP=4.19076;AC=15;AF=0.0815217;AN=184;AO=149;CIGAR=1X;DP=1499;DPB=1499;DPRA=1.25826;EPP=3.72441;EPPR=3.72017;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9718;NS=92;NUMALT=1;ODDS=0.00121233;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5308;QR=49640;RO=1349;RPP=326.56;RPPR=2923.65;RUN=1;SAF=71;SAP=3.72441;SAR=78;SRF=684;SRP=3.5914;SRR=665;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:33.4612:9:9:337:0:0:0,-2.70927,-10 0/0:30.4509:8:8:303:0:0:0,-2.40824,-10 0/0:81.626:25:25:880:0:0:0,-7.52575,-10 0/0:54.5333:16:16:600:0:0:0,-4.81648,-10 0/0:81.626:25:25:931:0:0:0,-7.52575,-10 0/0:39.4818:11:11:407:0:0:0,-3.31133,-10 0/0:87.6464:27:27:1000:0:0:0,-8.12781,-10 1/1:59.6802:27:0:0:27:950:-10,-8.12781,0 0/0:30.4509:8:8:296:0:0:0,-2.40824,-10 0/0:15.3994:3:3:112:0:0:0,-0.90309,-10 0/0:27.4406:7:7:263:0:0:0,-2.10721,-10 0/0:21.42:5:5:177:0:0:0,-1.50515,-10 0/0:99:36:36:1352:0:0:0,-10,-10 0/1:99:25:14:520:11:414:-10,0,-10 0/1:99:21:11:418:10:371:-10,0,-10 0/0:60.5539:18:18:678:0:0:0,-5.41854,-10 0/0:75.6054:23:23:860:0:0:0,-6.92369,-10 0/0:45.5024:13:13:492:0:0:0,-3.91339,-10 0/0:69.5848:21:21:780:0:0:0,-6.32163,-10 0/0:93.6661:29:29:1061:0:0:0,-8.72987,-10 0/0:36.4715:10:10:367:0:0:0,-3.0103,-10 0/0:75.6054:23:23:833:0:0:0,-6.92369,-10 0/0:30.4509:8:8:303:0:0:0,-2.40824,-10 0/0:66.5745:20:20:759:0:0:0,-6.0206,-10 0/0:48.5127:15:14:507:0:0:0,-4.21442,-10 0/0:42.4921:12:12:452:0:0:0,-3.61236,-10 0/0:48.5127:14:14:532:0:0:0,-4.21442,-10 0/0:45.5024:13:13:468:0:0:0,-3.91339,-10 0/0:54.5333:16:16:602:0:0:0,-4.81648,-10 0/0:87.6464:27:27:944:0:0:0,-8.12781,-10 0/0:21.42:5:5:168:0:0:0,-1.50515,-10 0/0:18.4097:4:4:152:0:0:0,-1.20412,-10 0/0:45.5024:13:13:493:0:0:0,-3.91339,-10 0/0:27.4406:7:7:244:0:0:0,-2.10721,-10 0/0:54.5333:16:16:572:0:0:0,-4.81648,-10 0/0:21.42:5:5:190:0:0:0,-1.50515,-10 0/0:39.4818:11:11:390:0:0:0,-3.31133,-10 0/0:54.5333:16:16:588:0:0:0,-4.81648,-10 0/0:42.4921:12:12:419:0:0:0,-3.61236,-10 0/0:45.5024:13:13:484:0:0:0,-3.91339,-10 0/0:66.5745:20:20:706:0:0:0,-6.0206,-10 0/0:39.4818:11:11:374:0:0:0,-3.31133,-10 0/0:33.4612:9:9:328:0:0:0,-2.70927,-10 0/0:99:32:32:1201:0:0:0,-9.63296,-10 0/0:75.6054:23:23:836:0:0:0,-6.92369,-10 0/0:54.5333:16:16:585:0:0:0,-4.81648,-10 0/0:84.6362:26:26:946:0:0:0,-7.82678,-10 0/0:18.7403:20:19:711:1:38:0,-0.91957,-10 0/0:42.4921:12:12:434:0:0:0,-3.61236,-10 0/0:90.6564:28:28:1046:0:0:0,-8.42884,-10 0/0:42.4921:12:12:439:0:0:0,-3.61236,-10 0/0:78.6157:24:24:901:0:0:0,-7.22472,-10 0/0:54.5333:16:16:595:0:0:0,-4.81648,-10 0/0:24.4303:6:6:210:0:0:0,-1.80618,-10 0/0:99:33:33:1224:0:0:0,-9.93399,-10 0/0:24.4303:6:6:218:0:0:0,-1.80618,-10 0/0:66.5745:20:20:747:0:0:0,-6.0206,-10 0/1:1.62621:11:0:0:11:354:-10,-3.31133,0 1/1:11.5154:11:0:0:11:374:-10,-3.31133,0 0/0:54.5333:16:16:560:0:0:0,-4.81648,-10 0/0:63.5642:19:19:669:0:0:0,-5.71957,-10 1/1:14.5257:12:0:0:12:418:-10,-3.61236,0 0/1:99:42:19:685:23:802:-10,0,-10 0/0:39.4818:11:11:414:0:0:0,-3.31133,-10 0/0:51.523:15:15:561:0:0:0,-4.51545,-10 0/0:81.626:25:25:946:0:0:0,-7.52575,-10 0/1:99:16:11:409:5:190:-10,0,-10 0/0:51.523:15:15:539:0:0:0,-4.51545,-10 0/1:99:24:15:544:9:341:-10,0,-10 0/0:45.5024:13:13:459:0:0:0,-3.91339,-10 0/0:48.5127:14:14:503:0:0:0,-4.21442,-10 0/0:87.6464:27:27:986:0:0:0,-8.12781,-10 0/0:60.5539:18:18:683:0:0:0,-5.41854,-10 0/0:36.4715:10:10:367:0:0:0,-3.0103,-10 0/0:60.5539:18:18:683:0:0:0,-5.41854,-10 0/0:42.4921:12:12:439:0:0:0,-3.61236,-10 0/0:39.4818:11:11:405:0:0:0,-3.31133,-10 0/1:0.737428:10:0:0:10:376:-10,-3.0103,0 0/0:21.42:5:5:189:0:0:0,-1.50515,-10 0/0:24.4303:6:6:223:0:0:0,-1.80618,-10 0/0:87.6464:27:27:1004:0:0:0,-8.12781,-10 0/0:84.6362:26:26:987:0:0:0,-7.82678,-10 1/1:35.5978:19:0:0:19:680:-10,-5.71957,0 0/0:63.5642:19:19:711:0:0:0,-5.71957,-10 0/0:99:31:31:1138:0:0:0,-9.33193,-10 0/0:24.4303:6:6:217:0:0:0,-1.80618,-10 0/0:36.4715:10:10:380:0:0:0,-3.0103,-10 0/0:66.5745:20:20:723:0:0:0,-6.0206,-10 0/0:24.4303:6:6:228:0:0:0,-1.80618,-10 0/0:63.5642:19:19:714:0:0:0,-5.71957,-10 0/0:36.4715:10:10:344:0:0:0,-3.0103,-10 0/0:48.5127:14:14:495:0:0:0,-4.21442,-10 scaffold_576 42468 . C T 1322.15 . AB=0.481481;ABP=3.09072;AC=4;AF=0.0217391;AN=184;AO=54;CIGAR=1X;DP=1478;DPB=1478;DPRA=1.39194;EPP=3.0103;EPPR=14.8192;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9846;NS=92;NUMALT=1;ODDS=1.15757;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1941;QR=51598;RO=1424;RPP=120.27;RPPR=3095.19;RUN=1;SAF=27;SAP=3.0103;SAR=27;SRF=668;SRP=14.8192;SRR=756;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.8892:12:12:438:0:0:0,-3.61236,-10 0/0:25.8377:7:7:243:0:0:0,-2.10721,-10 0/0:58.951:18:18:656:0:0:0,-5.41854,-10 0/0:34.8686:10:10:366:0:0:0,-3.0103,-10 0/1:99:11:6:226:5:189:-10,0,-10 0/0:22.8274:6:6:205:0:0:0,-1.80618,-10 1/1:77.0872:37:0:0:37:1378:-10,-10,0 0/0:50.7406:24:23:818:1:16:0,-4.24451,-10 0/0:49.9201:15:15:501:0:0:0,-4.51545,-10 0/0:7.77588:1:1:38:0:0:0,-0.30103,-3.8 0/0:22.8274:6:6:226:0:0:0,-1.80618,-10 0/0:16.8068:4:4:151:0:0:0,-1.20412,-10 0/0:61.9613:19:19:705:0:0:0,-5.71957,-10 0/0:59.26:27:26:973:1:16:0,-5.09645,-10 0/0:58.951:18:18:666:0:0:0,-5.41854,-10 0/0:31.8583:9:9:342:0:0:0,-2.70927,-10 0/1:99:16:8:304:8:300:-10,0,-10 0/0:40.8892:12:12:434:0:0:0,-3.61236,-10 0/0:61.9613:19:19:705:0:0:0,-5.71957,-10 0/0:43.5737:25:24:884:1:26:0,-3.52781,-10 0/0:43.8995:13:13:444:0:0:0,-3.91339,-10 0/0:61.9613:19:19:706:0:0:0,-5.71957,-10 0/0:31.8583:9:9:341:0:0:0,-2.70927,-10 0/0:61.9613:19:19:633:0:0:0,-5.71957,-10 0/0:58.951:18:18:633:0:0:0,-5.41854,-10 0/0:55.9407:17:17:642:0:0:0,-5.11751,-10 0/0:46.9098:14:14:520:0:0:0,-4.21442,-10 0/0:49.9201:15:15:543:0:0:0,-4.51545,-10 0/0:52.9304:16:16:596:0:0:0,-4.81648,-10 0/0:99:32:32:1198:0:0:0,-9.63296,-10 0/0:19.8171:5:5:185:0:0:0,-1.50515,-10 0/0:34.8686:10:10:345:0:0:0,-3.0103,-10 0/0:46.9098:14:14:498:0:0:0,-4.21442,-10 0/0:55.9407:17:17:604:0:0:0,-5.11751,-10 0/0:55.9407:17:17:623:0:0:0,-5.11751,-10 0/0:25.8377:7:7:260:0:0:0,-2.10721,-10 0/0:46.9098:14:14:523:0:0:0,-4.21442,-10 0/0:52.9304:16:16:576:0:0:0,-4.81648,-10 0/0:34.8686:10:10:335:0:0:0,-3.0103,-10 0/0:49.9201:15:15:564:0:0:0,-4.51545,-10 0/0:61.9613:19:19:666:0:0:0,-5.71957,-10 0/0:61.9613:19:19:704:0:0:0,-5.71957,-10 0/0:55.9407:17:17:610:0:0:0,-5.11751,-10 0/0:99:33:33:1210:0:0:0,-9.93399,-10 0/0:64.9716:20:20:703:0:0:0,-6.0206,-10 0/0:40.8892:12:12:393:0:0:0,-3.61236,-10 0/0:99:40:40:1473:0:0:0,-10,-10 0/0:64.9716:20:20:721:0:0:0,-6.0206,-10 0/0:17.6273:12:11:357:1:16:0,-0.933179,-10 0/0:74.0025:23:23:840:0:0:0,-6.92369,-10 0/0:40.8892:12:12:431:0:0:0,-3.61236,-10 0/0:99:39:39:1356:0:0:0,-10,-10 0/0:37.8789:11:11:418:0:0:0,-3.31133,-10 0/0:25.8377:7:7:254:0:0:0,-2.10721,-10 0/0:99:35:35:1306:0:0:0,-10,-10 0/0:28.848:8:8:304:0:0:0,-2.40824,-10 0/0:58.951:18:18:624:0:0:0,-5.41854,-10 0/0:25.8377:7:7:264:0:0:0,-2.10721,-10 0/0:64.9716:20:20:725:0:0:0,-6.0206,-10 0/0:37.8789:11:11:409:0:0:0,-3.31133,-10 0/0:52.9304:16:16:555:0:0:0,-4.81648,-10 0/0:55.9407:17:17:635:0:0:0,-5.11751,-10 0/0:99:33:33:1180:0:0:0,-9.93399,-10 0/0:46.9098:14:14:531:0:0:0,-4.21442,-10 0/0:28.848:8:8:259:0:0:0,-2.40824,-10 0/0:64.9716:20:20:741:0:0:0,-6.0206,-10 0/0:28.848:8:8:300:0:0:0,-2.40824,-10 0/0:52.9304:16:16:571:0:0:0,-4.81648,-10 0/0:89.0535:28:28:1049:0:0:0,-8.42884,-10 0/0:37.8789:11:11:414:0:0:0,-3.31133,-10 0/0:55.9407:17:17:596:0:0:0,-5.11751,-10 0/0:49.9201:15:15:562:0:0:0,-4.51545,-10 0/0:70.9922:22:22:762:0:0:0,-6.62266,-10 0/0:64.9716:20:20:754:0:0:0,-6.0206,-10 0/0:89.0535:28:28:981:0:0:0,-8.42884,-10 0/0:43.8995:13:13:487:0:0:0,-3.91339,-10 0/0:64.9716:20:20:730:0:0:0,-6.0206,-10 0/0:49.9201:15:15:539:0:0:0,-4.51545,-10 0/0:19.8171:5:5:164:0:0:0,-1.50515,-10 0/0:34.8686:10:10:357:0:0:0,-3.0103,-10 0/0:92.0632:29:29:1057:0:0:0,-8.72987,-10 0/0:52.9304:16:16:557:0:0:0,-4.81648,-10 0/0:74.0025:23:23:826:0:0:0,-6.92369,-10 0/0:64.9716:20:20:720:0:0:0,-6.0206,-10 0/0:67.9819:21:21:783:0:0:0,-6.32163,-10 0/0:13.7965:3:3:112:0:0:0,-0.90309,-10 0/0:49.9201:15:15:570:0:0:0,-4.51545,-10 0/0:34.8686:10:10:367:0:0:0,-3.0103,-10 0/0:7.77588:1:1:36:0:0:0,-0.30103,-3.6 0/0:22.8274:6:6:228:0:0:0,-1.80618,-10 0/0:40.8892:12:12:409:0:0:0,-3.61236,-10 0/0:34.8686:10:10:348:0:0:0,-3.0103,-10 scaffold_604 27509 . TC T 714.538 . AB=0.911765;ABP=53.0819;AC=3;AF=0.0163043;AN=184;AO=31;CIGAR=1M1D1M;DP=1118;DPB=1107.67;DPRA=0.930504;EPP=3.08035;EPPR=3.17331;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9657;NS=92;NUMALT=1;ODDS=2.57378;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1120;QR=39486;RO=1079;RPP=70.3259;RPPR=2346.03;RUN=1;SAF=16;SAP=3.08035;SAR=15;SRF=535;SRP=3.17331;SRR=544;TYPE=del GT:GQ:DP:RO:QR:AO:QA:GL 0|0:24.1957:6:5:186:0:0:0,-1.50515,-10 0|0:27.206:6:6:221:0:0:0,-1.80618,-10 0|0:39.2472:10:10:374:0:0:0,-3.0103,-10 0|0:21.1854:4:4:147:0:0:0,-1.20412,-10 0|0:33.2266:8:8:289:0:0:0,-2.40824,-10 0|0:45.2678:12:12:450:0:0:0,-3.61236,-10 0|0:66.3399:19:19:690:0:0:0,-5.71957,-10 0|0:66.3399:19:19:705:0:0:0,-5.71957,-10 0|0:36.2369:9:9:312:0:0:0,-2.70927,-10 0|0:15.1648:2:2:65:0:0:0,-0.60206,-6.175 0|0:24.1957:5:5:180:0:0:0,-1.50515,-10 0|0:18.1751:3:3:113:0:0:0,-0.90309,-10 0|0:54.2987:15:15:536:0:0:0,-4.51545,-10 0|0:63.3296:18:18:657:0:0:0,-5.41854,-10 0|0:57.309:16:16:579:0:0:0,-4.81648,-10 0|0:51.2884:14:14:517:0:0:0,-4.21442,-10 0|0:60.3193:17:17:628:0:0:0,-5.11751,-10 0|0:36.2369:9:9:332:0:0:0,-2.70927,-10 0|0:78.3811:23:23:865:0:0:0,-6.92369,-10 0|0:57.309:16:16:597:0:0:0,-4.81648,-10 0|0:48.2781:13:13:464:0:0:0,-3.91339,-10 0|0:66.3399:19:19:702:0:0:0,-5.71957,-10 0|0:21.1854:4:4:147:0:0:0,-1.20412,-10 0|0:54.2987:15:15:534:0:0:0,-4.51545,-10 0|0:51.2884:14:14:512:0:0:0,-4.21442,-10 0|0:51.2884:14:14:514:0:0:0,-4.21442,-10 0|0:48.2781:13:13:474:0:0:0,-3.91339,-10 0|0:36.2369:9:9:326:0:0:0,-2.70927,-10 0|0:45.2678:12:12:452:0:0:0,-3.61236,-10 0|0:66.3399:19:19:673:0:0:0,-5.71957,-10 0|0:21.1854:4:4:148:0:0:0,-1.20412,-10 0|0:33.2266:8:8:302:0:0:0,-2.40824,-10 0|0:45.2678:12:12:452:0:0:0,-3.61236,-10 0|0:27.206:6:6:224:0:0:0,-1.80618,-10 0|0:48.2781:13:13:456:0:0:0,-3.91339,-10 0|0:24.1957:5:5:185:0:0:0,-1.50515,-10 0|0:36.2369:9:9:312:0:0:0,-2.70927,-10 0|0:57.309:16:16:590:0:0:0,-4.81648,-10 0|0:36.2369:9:9:337:0:0:0,-2.70927,-10 0|0:27.206:6:6:227:0:0:0,-1.80618,-10 0|0:42.2575:11:11:398:0:0:0,-3.31133,-10 0|0:36.2369:9:9:342:0:0:0,-2.70927,-10 0|0:57.309:16:16:601:0:0:0,-4.81648,-10 0|0:69.3502:20:20:719:0:0:0,-6.0206,-10 0|0:72.3605:21:21:772:0:0:0,-6.32163,-10 0|0:42.2575:11:11:393:0:0:0,-3.31133,-10 0|0:72.3605:21:21:794:0:0:0,-6.32163,-10 0|0:60.3193:17:17:630:0:0:0,-5.11751,-10 0|0:48.2781:13:13:456:0:0:0,-3.91339,-10 0|0:78.3811:23:23:853:0:0:0,-6.92369,-10 0|0:45.2678:12:12:424:0:0:0,-3.61236,-10 0|0:60.3193:17:17:632:0:0:0,-5.11751,-10 0|0:21.1854:4:4:151:0:0:0,-1.20412,-10 0|0:12.1545:1:1:38:0:0:0,-0.30103,-3.8 0|0:69.3502:20:20:721:0:0:0,-6.0206,-10 0|0:21.1854:4:4:151:0:0:0,-1.20412,-10 0|0:54.2987:15:15:569:0:0:0,-4.51545,-10 0|0:39.2472:10:10:371:0:0:0,-3.0103,-10 0|0:45.2678:12:12:409:0:0:0,-3.61236,-10 0|0:54.2987:15:15:561:0:0:0,-4.51545,-10 0|0:60.3193:18:17:642:0:0:0,-5.11751,-10 0|1:0.0100438:9:0:0:9:315:-10,-2.70927,0 0|0:63.3296:19:18:684:0:0:0,-5.41854,-10 0|0:33.2266:8:8:301:0:0:0,-2.40824,-10 0|0:33.2266:8:8:297:0:0:0,-2.40824,-10 0|0:69.3502:22:20:755:0:0:0,-6.0206,-10 0|0:39.2472:10:10:333:0:0:0,-3.0103,-10 0|0:21.1854:5:4:146:0:0:0,-1.20412,-10 0|1:99:15:3:113:12:425:-10,0,-8.68923 0|0:36.2369:9:9:331:0:0:0,-2.70927,-10 0|0:63.3296:18:18:635:0:0:0,-5.41854,-10 0|0:45.2678:13:12:414:0:0:0,-3.61236,-10 0|0:45.2678:12:12:441:0:0:0,-3.61236,-10 0|0:36.2369:9:9:342:0:0:0,-2.70927,-10 0|0:69.3502:20:20:738:0:0:0,-6.0206,-10 0|0:39.2472:10:10:361:0:0:0,-3.0103,-10 0|0:48.2781:13:13:473:0:0:0,-3.91339,-10 0|0:30.2163:7:7:260:0:0:0,-2.10721,-10 0|0:21.1854:4:4:139:0:0:0,-1.20412,-10 0|0:36.2369:9:9:316:0:0:0,-2.70927,-10 0|0:60.3193:17:17:614:0:0:0,-5.11751,-10 0|0:57.309:16:16:565:0:0:0,-4.81648,-10 0|0:66.3399:19:19:672:0:0:0,-5.71957,-10 0|0:60.3193:17:17:635:0:0:0,-5.11751,-10 0|0:54.2987:15:15:559:0:0:0,-4.51545,-10 0|1:0.0201108:10:0:0:10:380:-10,-3.0103,0 0|0:39.2472:10:10:368:0:0:0,-3.0103,-10 0|0:45.2678:12:12:455:0:0:0,-3.61236,-10 0|0:21.1854:4:4:152:0:0:0,-1.20412,-10 0|0:57.309:16:16:565:0:0:0,-4.81648,-10 0|0:54.2987:16:15:537:0:0:0,-4.51545,-10 0|0:24.1957:5:5:184:0:0:0,-1.50515,-10 scaffold_610 40201 . A C 13434 . AB=0.461874;ABP=8.80562;AC=43;AF=0.233696;AN=184;AO=481;CIGAR=1X;DP=1740;DPB=1740;DPRA=1.52846;EPP=4.02606;EPPR=6.20954;GTI=2;LEN=1;MEANALT=1.03333;MQM=59.9002;MQMR=59.9777;NS=92;NUMALT=1;ODDS=0.485312;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=17536;QR=45945;RO=1255;RPP=1047.49;RPPR=2728.21;RUN=1;SAF=248;SAP=4.02606;SAR=233;SRF=649;SRP=6.20954;SRR=606;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:46.7974:16:16:586:0:0:0,-4.81648,-10 0/0:25.7253:9:9:340:0:0:0,-2.70927,-10 0/0:40.7768:14:14:520:0:0:0,-4.21442,-10 0/0:28.7356:10:10:366:0:0:0,-3.0103,-10 0/0:22.715:8:8:303:0:0:0,-2.40824,-10 0/0:22.715:8:8:299:0:0:0,-2.40824,-10 0/0:99:36:36:1355:0:0:0,-10,-10 0/0:82.9208:28:28:1044:0:0:0,-8.42884,-10 1/1:34.4811:12:0:0:12:444:-10,-3.61236,0 0/0:16.6944:6:6:227:0:0:0,-1.80618,-10 0/0:19.7047:7:7:241:0:0:0,-2.10721,-10 0/1:0.939244:2:2:76:0:0:0,-0.60206,-7.22 0/1:99:24:10:373:14:503:-10,0,-10 0/1:99:33:17:593:16:604:-10,0,-10 0/0:58.8386:20:20:705:0:0:0,-6.0206,-10 0/1:99:19:11:392:8:304:-10,0,-10 0/0:49.8077:17:17:637:0:0:0,-5.11751,-10 0/0:28.7356:10:10:374:0:0:0,-3.0103,-10 0/1:98.9899:27:23:846:4:152:-10,0,-10 0/0:85.9312:29:29:1083:0:0:0,-8.72987,-10 0/1:99:16:10:346:6:219:-10,0,-10 0/1:99:26:13:462:13:488:-10,0,-10 0/0:25.7253:9:9:342:0:0:0,-2.70927,-10 0/1:99:24:12:435:12:426:-10,0,-10 0/0:52.818:18:18:661:0:0:0,-5.41854,-10 0/0:25.2854:25:24:850:1:38:0,-2.32781,-10 0/0:52.818:18:18:662:0:0:0,-5.41854,-10 0/0:58.8386:20:20:732:0:0:0,-6.0206,-10 1/1:55.5532:19:0:0:19:710:-10,-5.71957,0 0/1:99:39:23:843:16:581:-10,0,-10 0/0:10.6738:4:4:126:0:0:0,-1.20412,-10 0/0:25.7253:9:9:297:0:0:0,-2.70927,-10 0/0:49.8077:17:17:607:0:0:0,-5.11751,-10 0/0:31.7459:11:11:414:0:0:0,-3.31133,-10 0/0:43.7871:15:15:547:0:0:0,-4.51545,-10 0/0:34.7562:12:12:432:0:0:0,-3.61236,-10 0/0:22.715:8:8:301:0:0:0,-2.40824,-10 0/0:67.8695:23:23:847:0:0:0,-6.92369,-10 0/0:55.8283:19:19:706:0:0:0,-5.71957,-10 0/0:31.7459:11:11:414:0:0:0,-3.31133,-10 1/1:82.6459:28:0:0:28:1058:-10,-8.42884,0 0/0:61.8489:21:21:784:0:0:0,-6.32163,-10 0/0:52.818:18:18:658:0:0:0,-5.41854,-10 0/0:76.9004:26:26:933:0:0:0,-7.82678,-10 0/0:73.8901:25:25:918:0:0:0,-7.52575,-10 0/1:69.7892:7:5:190:2:76:-6.43501,0,-10 0/1:99:35:19:722:15:523:-10,0,-10 0/1:99:33:14:483:19:715:-10,0,-10 0/0:19.7047:7:7:264:0:0:0,-2.10721,-10 0/0:99:34:34:1221:0:0:0,-10,-10 0/0:31.7459:11:11:414:0:0:0,-3.31133,-10 0/0:99:37:37:1378:0:0:0,-10,-10 1/1:58.5635:20:0:0:20:756:-10,-6.0206,0 0/0:19.7047:7:7:240:0:0:0,-2.10721,-10 0/1:99:33:12:453:21:767:-10,0,-10 1/1:55.5532:19:0:0:19:669:-10,-5.71957,0 0/1:99:22:13:490:9:320:-10,0,-10 0/0:10.6738:4:4:151:0:0:0,-1.20412,-10 0/0:43.7871:16:15:538:0:0:0,-4.51545,-10 0/0:31.7459:11:11:404:0:0:0,-3.31133,-10 0/0:79.9106:27:27:961:0:0:0,-8.12781,-10 0/0:40.7768:14:14:477:0:0:0,-4.21442,-10 0/0:99:40:40:1444:0:0:0,-10,-10 0/0:52.818:18:18:679:0:0:0,-5.41854,-10 1/1:55.5532:19:0:0:19:713:-10,-5.71957,0 0/1:99:36:17:620:19:717:-10,0,-10 0/0:34.7562:12:12:427:0:0:0,-3.61236,-10 0/0:25.7253:9:9:341:0:0:0,-2.70927,-10 0/0:99:36:36:1347:0:0:0,-10,-10 0/0:49.8077:17:17:598:0:0:0,-5.11751,-10 1/1:85.6562:29:0:0:29:1031:-10,-8.72987,0 1/1:99:34:0:0:34:1226:-10,-10,0 1/1:58.5635:20:0:0:20:718:-10,-6.0206,0 1/1:70.6047:24:0:0:24:856:-10,-7.22472,0 1/1:99:36:0:0:36:1239:-10,-10,0 0/0:28.7356:10:10:353:0:0:0,-3.0103,-10 0/0:31.7459:11:11:417:0:0:0,-3.31133,-10 0/0:28.7356:11:10:355:0:0:0,-3.0103,-10 0/0:25.7253:9:9:342:0:0:0,-2.70927,-10 1/1:22.4399:8:0:0:8:281:-10,-2.40824,0 0/1:99:39:24:892:15:565:-10,0,-10 0/0:91.9517:31:31:1096:0:0:0,-9.33193,-10 0/0:88.9415:30:30:1105:0:0:0,-9.0309,-10 0/1:99:24:10:369:14:495:-10,0,-10 0/1:99:22:13:491:9:342:-10,0,-10 0/1:0.939244:2:2:76:0:0:0,-0.60206,-7.22 0/0:64.8592:22:22:821:0:0:0,-6.62266,-10 0/0:19.7047:7:7:266:0:0:0,-2.10721,-10 0/0:19.7047:7:7:260:0:0:0,-2.10721,-10 0/0:31.7459:12:11:410:0:0:0,-3.31133,-10 0/0:49.8077:17:17:634:0:0:0,-5.11751,-10 0/0:43.7871:15:15:539:0:0:0,-4.51545,-10 scaffold_610 40228 . C A 1489.85 . AB=0.583333;ABP=8.80089;AC=4;AF=0.0217391;AN=184;AO=57;CIGAR=1X;DP=1740;DPB=1740;DPRA=1.15147;EPP=3.35316;EPPR=7.0589;GTI=1;LEN=1;MEANALT=1;MQM=60;MQMR=59.9459;NS=92;NUMALT=1;ODDS=2.79994;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2087;QR=60367;RO=1682;RPP=126.784;RPPR=3655.43;RUN=1;SAF=30;SAP=3.35316;SAR=27;SRF=869;SRP=7.0589;SRR=813;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.2078:16:16:604:0:0:0,-4.81648,-10 0/0:34.1357:9:9:342:0:0:0,-2.70927,-10 0/0:49.1872:14:14:515:0:0:0,-4.21442,-10 0/0:37.146:10:10:360:0:0:0,-3.0103,-10 0/0:31.1254:8:8:281:0:0:0,-2.40824,-10 0/0:31.1254:8:8:296:0:0:0,-2.40824,-10 0/0:99:36:36:1355:0:0:0,-10,-10 0/0:91.3309:28:28:971:0:0:0,-8.42884,-10 0/0:43.1666:12:12:433:0:0:0,-3.61236,-10 0/0:25.1048:6:6:215:0:0:0,-1.80618,-10 0/0:28.1151:7:7:235:0:0:0,-2.10721,-10 0/0:13.0636:2:2:76:0:0:0,-0.60206,-7.22 0/0:79.2901:24:24:848:0:0:0,-7.22472,-10 0/0:99:33:33:1163:0:0:0,-9.93399,-10 0/0:67.249:20:20:719:0:0:0,-6.0206,-10 0/0:64.2387:19:19:676:0:0:0,-5.71957,-10 0/0:58.2181:17:17:630:0:0:0,-5.11751,-10 0/0:37.146:10:10:378:0:0:0,-3.0103,-10 0/0:88.3208:27:27:1004:0:0:0,-8.12781,-10 0/0:94.3407:29:29:1026:0:0:0,-8.72987,-10 0/0:55.2078:16:16:602:0:0:0,-4.81648,-10 0/1:99:26:13:492:13:467:-10,0,-10 0/0:34.1357:9:9:333:0:0:0,-2.70927,-10 0/0:79.2901:24:24:844:0:0:0,-7.22472,-10 0/0:61.2284:18:18:625:0:0:0,-5.41854,-10 0/1:99:25:11:415:14:509:-10,0,-10 0/0:61.2284:18:18:640:0:0:0,-5.41854,-10 0/0:67.249:20:20:706:0:0:0,-6.0206,-10 0/0:64.2387:19:19:701:0:0:0,-5.71957,-10 0/0:99:39:39:1387:0:0:0,-10,-10 0/0:19.0842:4:4:152:0:0:0,-1.20412,-10 0/0:34.1357:9:9:301:0:0:0,-2.70927,-10 0/0:58.2181:17:17:613:0:0:0,-5.11751,-10 0/0:40.1563:11:11:415:0:0:0,-3.31133,-10 0/0:52.1975:15:15:562:0:0:0,-4.51545,-10 0/0:19.7297:12:11:385:1:16:0,-0.933179,-10 0/0:31.1254:8:8:269:0:0:0,-2.40824,-10 0/0:76.2799:23:23:862:0:0:0,-6.92369,-10 0/0:64.2387:19:19:713:0:0:0,-5.71957,-10 0/0:40.1563:11:11:370:0:0:0,-3.31133,-10 0/0:91.3309:28:28:1017:0:0:0,-8.42884,-10 0/0:70.2593:21:21:791:0:0:0,-6.32163,-10 0/0:61.2284:18:18:653:0:0:0,-5.41854,-10 0/0:85.3107:26:26:899:0:0:0,-7.82678,-10 0/0:82.3004:25:25:853:0:0:0,-7.52575,-10 0/0:28.1151:7:7:266:0:0:0,-2.10721,-10 0/0:99:35:35:1221:0:0:0,-10,-10 0/0:99:33:33:1191:0:0:0,-9.93399,-10 0/0:28.1151:7:7:264:0:0:0,-2.10721,-10 0/1:99:34:16:589:18:678:-10,0,-10 0/1:0.155163:11:0:0:11:417:-10,-3.31133,0 0/0:99:37:37:1315:0:0:0,-10,-10 0/0:67.249:20:20:726:0:0:0,-6.0206,-10 0/0:28.1151:7:7:239:0:0:0,-2.10721,-10 0/0:99:33:33:1208:0:0:0,-9.93399,-10 0/0:64.2387:19:19:664:0:0:0,-5.71957,-10 0/0:73.2696:22:22:795:0:0:0,-6.62266,-10 0/0:19.0842:4:4:145:0:0:0,-1.20412,-10 0/0:55.2078:16:16:581:0:0:0,-4.81648,-10 0/0:40.1563:11:11:412:0:0:0,-3.31133,-10 0/0:88.3208:27:27:930:0:0:0,-8.12781,-10 0/0:49.1872:14:14:479:0:0:0,-4.21442,-10 0/0:99:40:40:1426:0:0:0,-10,-10 0/0:61.2284:18:18:622:0:0:0,-5.41854,-10 0/0:64.2387:19:19:709:0:0:0,-5.71957,-10 0/0:99:36:36:1203:0:0:0,-10,-10 0/0:43.1666:12:12:430:0:0:0,-3.61236,-10 0/0:34.1357:9:9:339:0:0:0,-2.70927,-10 0/0:99:36:36:1292:0:0:0,-10,-10 0/0:58.2181:17:17:642:0:0:0,-5.11751,-10 0/0:94.3407:29:29:1082:0:0:0,-8.72987,-10 0/0:99:34:34:1152:0:0:0,-10,-10 0/0:67.249:20:20:722:0:0:0,-6.0206,-10 0/0:79.2901:24:24:875:0:0:0,-7.22472,-10 0/0:99:36:35:1225:0:0:0,-10,-10 0/0:37.146:10:10:332:0:0:0,-3.0103,-10 0/0:40.1563:11:11:417:0:0:0,-3.31133,-10 0/0:40.1563:11:11:348:0:0:0,-3.31133,-10 0/0:34.1357:9:9:316:0:0:0,-2.70927,-10 0/0:31.1254:8:8:303:0:0:0,-2.40824,-10 0/0:99:39:39:1449:0:0:0,-10,-10 0/0:99:31:31:1072:0:0:0,-9.33193,-10 0/0:97.3501:30:30:1117:0:0:0,-9.0309,-10 0/0:79.2901:24:24:821:0:0:0,-7.22472,-10 0/0:73.2696:22:22:798:0:0:0,-6.62266,-10 0/0:13.0636:2:2:73:0:0:0,-0.60206,-6.935 0/0:73.2696:22:22:764:0:0:0,-6.62266,-10 0/0:28.1151:7:7:265:0:0:0,-2.10721,-10 0/0:28.1151:7:7:255:0:0:0,-2.10721,-10 0/0:43.1666:12:12:404:0:0:0,-3.61236,-10 0/0:58.2181:17:17:630:0:0:0,-5.11751,-10 0/0:52.1975:15:15:532:0:0:0,-4.51545,-10 scaffold_610 54027 . G A 5481.42 . AB=0.531148;ABP=5.58047;AC=18;AF=0.0978261;AN=184;AO=201;CIGAR=1X;DP=1623;DPB=1623;DPRA=1.45252;EPP=356.939;EPPR=2536.31;GTI=0;LEN=1;MEANALT=1;MQM=59.7114;MQMR=59.9606;NS=92;NUMALT=1;ODDS=1.90759;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=7211;QR=51874;RO=1422;RPP=3.53966;RPPR=22.1657;RUN=1;SAF=96;SAP=3.88537;SAR=105;SRF=720;SRP=3.50507;SRR=702;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:40.2806:12:12:426:0:0:0,-3.61236,-10 0/0:16.1982:4:4:129:0:0:0,-1.20412,-10 0/0:73.3939:23:23:813:0:0:0,-6.92369,-10 0/0:31.2497:9:9:338:0:0:0,-2.70927,-10 0/0:34.26:10:10:375:0:0:0,-3.0103,-10 0/0:40.2806:12:12:453:0:0:0,-3.61236,-10 0/0:99:43:43:1601:0:0:0,-10,-10 0/0:58.3424:18:18:671:0:0:0,-5.41854,-10 0/0:37.2703:11:11:417:0:0:0,-3.31133,-10 0/0:10.1776:2:2:76:0:0:0,-0.60206,-7.22 0/0:19.2085:5:5:190:0:0:0,-1.50515,-10 0/0:16.1982:4:4:151:0:0:0,-1.20412,-10 0/0:52.3218:16:16:589:0:0:0,-4.81648,-10 0/0:61.3527:19:19:707:0:0:0,-5.71957,-10 0/0:76.4042:24:24:893:0:0:0,-7.22472,-10 0/0:49.3115:15:15:521:0:0:0,-4.51545,-10 0/0:49.3115:15:15:543:0:0:0,-4.51545,-10 0/0:34.26:10:10:377:0:0:0,-3.0103,-10 0/1:99:15:9:320:6:228:-10,0,-10 0/1:99:27:12:440:15:536:-10,0,-10 0/0:52.3218:16:16:601:0:0:0,-4.81648,-10 0/0:91.4549:29:29:1000:0:0:0,-8.72987,-10 0/0:25.2291:7:7:265:0:0:0,-2.10721,-10 0/1:53.2954:10:8:279:2:76:-5.86291,0,-10 0/0:70.3836:22:22:793:0:0:0,-6.62266,-10 0/0:82.4247:26:26:915:0:0:0,-7.82678,-10 0/0:49.3115:15:15:549:0:0:0,-4.51545,-10 0/0:40.2806:12:12:408:0:0:0,-3.61236,-10 1/1:27.4988:12:0:0:12:451:-10,-3.61236,0 0/1:99:28:7:263:21:774:-10,0,-10 0/0:22.2188:6:6:218:0:0:0,-1.80618,-10 0/0:22.2188:6:6:205:0:0:0,-1.80618,-10 0/0:30.6464:17:16:592:1:16:0,-2.28706,-10 0/0:76.4042:24:24:854:0:0:0,-7.22472,-10 0/0:58.3424:18:18:676:0:0:0,-5.41854,-10 0/0:25.2291:7:7:265:0:0:0,-2.10721,-10 0/0:31.2497:9:9:333:0:0:0,-2.70927,-10 0/1:99:26:12:432:14:464:-10,0,-10 0/0:64.363:20:20:755:0:0:0,-6.0206,-10 0/1:99:15:7:260:8:303:-10,0,-10 0/1:99:42:16:599:26:944:-10,0,-10 0/0:37.2703:11:11:407:0:0:0,-3.31133,-10 1/1:36.5297:15:0:0:15:527:-10,-4.51545,0 0/0:97.4757:31:31:1132:0:0:0,-9.33193,-10 0/0:43.2909:13:13:490:0:0:0,-3.91339,-10 0/1:99:14:6:219:8:293:-10,0,-10 0/1:99:48:26:955:22:810:-10,0,-10 0/1:99:25:16:547:9:341:-10,0,-10 0/0:25.2291:7:7:265:0:0:0,-2.10721,-10 0/0:92.3761:43:42:1524:1:16:0,-9.71082,-10 0/0:49.3115:15:15:556:0:0:0,-4.51545,-10 0/0:97.4757:31:31:1110:0:0:0,-9.33193,-10 1/1:21.4782:10:0:0:10:342:-10,-3.0103,0 0/0:37.2703:11:11:394:0:0:0,-3.31133,-10 0/1:99:38:14:504:24:826:-10,0,-10 0/0:28.2394:8:8:283:0:0:0,-2.40824,-10 0/1:99:17:10:380:7:264:-10,0,-10 0/0:25.2291:7:7:244:0:0:0,-2.10721,-10 0/0:79.4144:25:25:908:0:0:0,-7.52575,-10 0/0:31.2497:9:9:312:0:0:0,-2.70927,-10 0/0:99:32:32:1185:0:0:0,-9.63296,-10 0/0:43.2909:13:13:470:0:0:0,-3.91339,-10 0/0:99:39:39:1430:0:0:0,-10,-10 0/0:55.3321:17:17:637:0:0:0,-5.11751,-10 0/0:52.3218:16:16:597:0:0:0,-4.81648,-10 0/0:99:36:36:1304:0:0:0,-10,-10 0/0:64.363:20:20:693:0:0:0,-6.0206,-10 0/0:25.2291:7:7:264:0:0:0,-2.10721,-10 0/0:88.445:28:28:992:0:0:0,-8.42884,-10 0/0:25.2291:7:7:266:0:0:0,-2.10721,-10 0/0:67.3733:21:21:775:0:0:0,-6.32163,-10 0/0:79.4144:25:25:935:0:0:0,-7.52575,-10 0/0:70.3836:22:22:769:0:0:0,-6.62266,-10 0/0:28.2394:8:8:281:0:0:0,-2.40824,-10 0/0:70.3836:22:22:816:0:0:0,-6.62266,-10 0/0:40.2806:12:12:445:0:0:0,-3.61236,-10 0/0:46.3012:14:14:510:0:0:0,-4.21442,-10 0/0:55.3321:17:17:638:0:0:0,-5.11751,-10 0/0:52.3218:16:16:582:0:0:0,-4.81648,-10 0/0:49.3115:15:15:542:0:0:0,-4.51545,-10 0/0:94.4657:30:30:1087:0:0:0,-9.0309,-10 0/0:94.4657:30:30:1101:0:0:0,-9.0309,-10 0/0:85.4349:27:27:1012:0:0:0,-8.12781,-10 0/0:73.3939:23:23:836:0:0:0,-6.92369,-10 0/0:40.2806:12:12:442:0:0:0,-3.61236,-10 0/0:10.1776:2:2:76:0:0:0,-0.60206,-7.22 0/0:49.3115:15:15:563:0:0:0,-4.51545,-10 0/0:40.2806:12:12:450:0:0:0,-3.61236,-10 0/0:13.1879:3:3:111:0:0:0,-0.90309,-10 0/0:61.3527:19:19:678:0:0:0,-5.71957,-10 0/0:58.3424:18:18:637:0:0:0,-5.41854,-10 0/0:22.2188:6:6:228:0:0:0,-1.80618,-10 scaffold_610 55720 . T C 1634.28 . AB=0.484375;ABP=3.28173;AC=4;AF=0.0217391;AN=184;AO=65;CIGAR=1X;DP=2266;DPB=2266;DPRA=1.29911;EPP=4.64726;EPPR=3.02611;GTI=2;LEN=1;MEANALT=1;MQM=60;MQMR=59.9409;NS=92;NUMALT=1;ODDS=0.961416;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2347;QR=80125;RO=2198;RPP=144.156;RPPR=4767.22;RUN=1;SAF=29;SAP=4.64726;SAR=36;SRF=1096;SRP=3.04587;SRR=1102;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:68.4214:18:18:652:0:0:0,-5.41854,-10 0/0:71.4317:19:19:676:0:0:0,-5.71957,-10 0/0:99:32:32:1142:0:0:0,-9.63296,-10 0/0:62.4008:16:16:599:0:0:0,-4.81648,-10 0/0:56.3802:14:14:519:0:0:0,-4.21442,-10 0/0:50.3596:12:12:449:0:0:0,-3.61236,-10 0/1:99:39:22:825:17:633:-10,0,-10 0/0:99:36:36:1327:0:0:0,-10,-10 0/0:59.3905:15:15:545:0:0:0,-4.51545,-10 0/0:26.2772:4:4:143:0:0:0,-1.20412,-10 0/0:50.3596:13:12:425:0:0:0,-3.61236,-10 0/1:0.00181852:7:0:0:7:264:-10,-2.10721,0 0/0:99:35:35:1217:0:0:0,-10,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:99:36:36:1335:0:0:0,-10,-10 0/0:71.4317:19:19:695:0:0:0,-5.71957,-10 0/0:92.5019:26:26:937:0:0:0,-7.82678,-10 0/0:50.3596:12:12:430:0:0:0,-3.61236,-10 0/0:99:33:33:1238:0:0:0,-9.93399,-10 0/0:99:30:30:1097:0:0:0,-9.0309,-10 0/0:71.4317:19:19:713:0:0:0,-5.71957,-10 0/0:99:36:36:1336:0:0:0,-10,-10 0/0:50.3596:12:12:424:0:0:0,-3.61236,-10 0/0:77.4523:21:21:790:0:0:0,-6.32163,-10 0/0:99:38:38:1379:0:0:0,-10,-10 0/0:99:40:40:1419:0:0:0,-10,-10 0/0:92.5019:26:26:919:0:0:0,-7.82678,-10 0/0:71.4317:19:19:722:0:0:0,-5.71957,-10 0/0:98.5239:28:28:994:0:0:0,-8.42884,-10 0/0:99:51:51:1890:0:0:0,-10,-10 0/0:62.4008:16:16:592:0:0:0,-4.81648,-10 0/0:38.3184:8:8:302:0:0:0,-2.40824,-10 0/0:89.4926:26:25:882:0:0:0,-7.52575,-10 0/0:38.3184:8:8:281:0:0:0,-2.40824,-10 0/0:98.5239:28:28:1015:0:0:0,-8.42884,-10 0/0:47.3493:11:11:395:0:0:0,-3.31133,-10 0/0:38.3184:8:8:279:0:0:0,-2.40824,-10 0/0:99:35:35:1289:0:0:0,-10,-10 0/0:80.4625:22:22:808:0:0:0,-6.62266,-10 0/0:98.5239:28:28:1057:0:0:0,-8.42884,-10 0/0:99:44:44:1643:0:0:0,-10,-10 0/0:86.4828:24:24:857:0:0:0,-7.22472,-10 0/0:65.4111:17:17:645:0:0:0,-5.11751,-10 0/0:99:36:36:1258:0:0:0,-10,-10 0/0:99:35:35:1263:0:0:0,-10,-10 0/0:77.4523:21:21:709:0:0:0,-6.32163,-10 0/0:99:53:53:1904:0:0:0,-10,-10 0/0:86.4828:24:24:903:0:0:0,-7.22472,-10 0/0:74.442:20:20:758:0:0:0,-6.0206,-10 0/0:99:49:49:1751:0:0:0,-10,-10 0/0:68.4214:18:18:657:0:0:0,-5.41854,-10 0/0:99:43:43:1504:0:0:0,-10,-10 0/0:59.3905:15:15:557:0:0:0,-4.51545,-10 0/0:35.3081:7:7:240:0:0:0,-2.10721,-10 0/0:99:46:46:1671:0:0:0,-10,-10 0/0:74.442:20:20:744:0:0:0,-6.0206,-10 0/0:99:32:32:1157:0:0:0,-9.63296,-10 0/0:47.3493:11:11:396:0:0:0,-3.31133,-10 0/0:68.4214:18:18:675:0:0:0,-5.41854,-10 0/0:35.3081:7:7:266:0:0:0,-2.10721,-10 0/0:95.5139:27:27:1001:0:0:0,-8.12781,-10 0/0:62.4008:17:16:559:0:0:0,-4.81648,-10 0/1:99:49:27:977:22:784:-10,0,-10 0/0:86.4828:24:24:840:0:0:0,-7.22472,-10 0/0:50.3596:12:12:453:0:0:0,-3.61236,-10 0/1:99:33:17:624:16:552:-10,0,-10 0/0:99:35:35:1264:0:0:0,-10,-10 0/0:68.4214:18:18:629:0:0:0,-5.41854,-10 0/0:92.5019:26:26:934:0:0:0,-7.82678,-10 0/0:32.2978:6:6:228:0:0:0,-1.80618,-10 0/0:86.4828:24:24:895:0:0:0,-7.22472,-10 0/0:99:34:34:1237:0:0:0,-10,-10 0/0:99:36:36:1350:0:0:0,-10,-10 0/0:71.4317:19:19:697:0:0:0,-5.71957,-10 0/0:99:37:37:1355:0:0:0,-10,-10 0/0:59.3905:15:15:498:0:0:0,-4.51545,-10 0/0:92.5019:26:26:983:0:0:0,-7.82678,-10 0/0:80.4625:22:22:820:0:0:0,-6.62266,-10 0/0:41.3287:9:9:337:0:0:0,-2.70927,-10 0/0:65.4111:17:17:635:0:0:0,-5.11751,-10 0/0:99:51:50:1874:1:38:0,-9.84496,-10 0/0:99:35:35:1246:0:0:0,-10,-10 0/0:99:36:36:1312:0:0:0,-10,-10 0/0:50.0872:28:27:1016:1:38:0,-3.18168,-10 0/0:98.5239:28:28:1044:0:0:0,-8.42884,-10 0/0:38.3184:8:8:275:0:0:0,-2.40824,-10 0/0:56.3802:14:14:526:0:0:0,-4.21442,-10 0/0:1.39834:12:11:403:1:38:-1.26682,0,-10 0/0:50.3596:12:12:450:0:0:0,-3.61236,-10 0/0:99:34:34:1207:0:0:0,-10,-10 0/0:99:35:35:1300:0:0:0,-10,-10 0/0:77.4523:21:21:753:0:0:0,-6.32163,-10 scaffold_610 55725 . T G 281.54 . AB=0.461538;ABP=3.34437;AC=1;AF=0.00543478;AN=184;AO=12;CIGAR=1X;DP=2266;DPB=2266;DPRA=1.05625;EPP=3.73412;EPPR=3.1494;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9435;NS=92;NUMALT=1;ODDS=12.6808;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=432;QR=82166;RO=2248;RPP=29.068;RPPR=4884.48;RUN=1;SAF=5;SAP=3.73412;SAR=7;SRF=1118;SRP=3.1494;SRR=1130;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:97.2158:18:18:652:0:0:0,-5.41854,-10 0/0:99:19:19:674:0:0:0,-5.71957,-10 0/0:99:32:32:1152:0:0:0,-9.63296,-10 0/0:91.1955:16:16:575:0:0:0,-4.81648,-10 0/0:85.1749:14:14:498:0:0:0,-4.21442,-10 0/0:79.1542:12:12:452:0:0:0,-3.61236,-10 0/0:99:39:39:1470:0:0:0,-10,-10 0/0:99:36:35:1255:0:0:0,-10,-10 0/0:88.1845:15:15:532:0:0:0,-4.51545,-10 0/0:55.0719:4:4:130:0:0:0,-1.20412,-10 0/0:82.1646:13:13:443:0:0:0,-3.91339,-10 0/0:64.1028:7:7:256:0:0:0,-2.10721,-10 0/0:99:35:35:1229:0:0:0,-10,-10 0/0:99:30:30:1103:0:0:0,-9.0309,-10 0/0:99:36:36:1331:0:0:0,-10,-10 0/0:99:19:19:688:0:0:0,-5.71957,-10 0/0:99:26:26:941:0:0:0,-7.82678,-10 0/0:79.1542:12:12:434:0:0:0,-3.61236,-10 0/0:99:33:33:1249:0:0:0,-9.93399,-10 0/0:99:30:30:1118:0:0:0,-9.0309,-10 0/0:99:19:19:709:0:0:0,-5.71957,-10 0/0:99:36:36:1332:0:0:0,-10,-10 0/0:79.1542:12:12:425:0:0:0,-3.61236,-10 0/0:99:21:21:797:0:0:0,-6.32163,-10 0/0:99:38:38:1410:0:0:0,-10,-10 0/0:99:40:40:1440:0:0:0,-10,-10 0/0:99:26:26:942:0:0:0,-7.82678,-10 0/0:99:19:19:722:0:0:0,-5.71957,-10 0/0:99:28:28:951:0:0:0,-8.42884,-10 0/0:99:51:51:1873:0:0:0,-10,-10 0/0:91.1955:16:16:579:0:0:0,-4.81648,-10 0/0:67.1131:8:8:304:0:0:0,-2.40824,-10 0/0:99:26:26:911:0:0:0,-7.82678,-10 0/0:67.1131:8:8:292:0:0:0,-2.40824,-10 0/0:99:28:28:1031:0:0:0,-8.42884,-10 0/0:76.144:11:11:396:0:0:0,-3.31133,-10 0/0:67.1131:8:8:272:0:0:0,-2.40824,-10 0/0:99:35:34:1283:0:0:0,-10,-10 0/0:99:22:22:797:0:0:0,-6.62266,-10 0/0:99:28:28:1048:0:0:0,-8.42884,-10 0/0:99:44:43:1564:0:0:0,-10,-10 0/0:99:24:23:861:0:0:0,-6.92369,-10 0/0:94.2057:17:17:642:0:0:0,-5.11751,-10 0/0:99:36:36:1307:0:0:0,-10,-10 0/0:99:35:35:1305:0:0:0,-10,-10 0/0:99:21:21:763:0:0:0,-6.32163,-10 0/0:99:53:53:1946:0:0:0,-10,-10 0/0:99:24:24:894:0:0:0,-7.22472,-10 0/0:99:20:20:747:0:0:0,-6.0206,-10 0/0:99:49:49:1787:0:0:0,-10,-10 0/0:97.2158:18:18:679:0:0:0,-5.41854,-10 0/0:99:43:43:1551:0:0:0,-10,-10 0/0:88.1845:15:15:542:0:0:0,-4.51545,-10 0/0:64.1028:7:7:262:0:0:0,-2.10721,-10 0/0:99:46:46:1635:0:0:0,-10,-10 0/0:99:20:20:744:0:0:0,-6.0206,-10 0/0:99:32:32:1141:0:0:0,-9.63296,-10 0/0:76.144:11:11:384:0:0:0,-3.31133,-10 0/0:97.2158:18:18:669:0:0:0,-5.41854,-10 0/0:64.1028:7:7:261:0:0:0,-2.10721,-10 0/0:99:27:27:999:0:0:0,-8.12781,-10 0/0:94.2057:17:17:601:0:0:0,-5.11751,-10 0/0:99:49:49:1803:0:0:0,-10,-10 0/0:99:24:24:850:0:0:0,-7.22472,-10 0/0:79.1542:12:12:456:0:0:0,-3.61236,-10 0/0:99:33:33:1175:0:0:0,-9.93399,-10 0/0:99:35:34:1258:0:0:0,-10,-10 0/0:97.2158:18:18:628:0:0:0,-5.41854,-10 0/1:99:26:14:506:12:432:-10,0,-10 0/0:61.0925:6:6:228:0:0:0,-1.80618,-10 0/0:99:24:24:911:0:0:0,-7.22472,-10 0/0:99:34:34:1208:0:0:0,-10,-10 0/0:99:36:36:1320:0:0:0,-10,-10 0/0:99:19:19:704:0:0:0,-5.71957,-10 0/0:99:37:37:1364:0:0:0,-10,-10 0/0:88.1845:15:15:528:0:0:0,-4.51545,-10 0/0:99:26:26:958:0:0:0,-7.82678,-10 0/0:99:22:22:825:0:0:0,-6.62266,-10 0/0:70.1234:9:9:320:0:0:0,-2.70927,-10 0/0:94.2057:17:17:615:0:0:0,-5.11751,-10 0/0:99:51:51:1878:0:0:0,-10,-10 0/0:99:35:35:1317:0:0:0,-10,-10 0/0:99:36:36:1299:0:0:0,-10,-10 0/0:99:28:27:985:0:0:0,-8.12781,-10 0/0:99:28:28:1052:0:0:0,-8.42884,-10 0/0:67.1131:8:8:267:0:0:0,-2.40824,-10 0/0:85.1749:14:14:530:0:0:0,-4.21442,-10 0/0:79.1542:12:12:437:0:0:0,-3.61236,-10 0/0:79.1542:12:12:451:0:0:0,-3.61236,-10 0/0:99:34:34:1232:0:0:0,-10,-10 0/0:99:35:35:1317:0:0:0,-10,-10 0/0:99:21:21:764:0:0:0,-6.32163,-10 scaffold_682 17770 . G A 482.416 . AB=0.538462;ABP=3.51141;AC=3;AF=0.0163043;AN=184;AO=21;CIGAR=1X;DP=1280;DPB=1280;DPRA=0.932313;EPP=3.1137;EPPR=3.05349;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.961;NS=92;NUMALT=1;ODDS=7.82304;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=765;QR=45568;RO=1257;RPP=48.6112;RPPR=2715.21;RUN=1;SAF=11;SAP=3.1137;SAR=10;SRF=628;SRP=3.01203;SRR=629;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:55.0567:10:10:380:0:0:0,-3.0103,-10 0/0:52.0464:10:9:326:0:0:0,-2.70927,-10 0/1:99:13:8:304:5:187:-10,0,-10 0/0:46.0258:7:7:225:0:0:0,-2.10721,-10 0/0:46.0258:7:7:266:0:0:0,-2.10721,-10 0/0:49.0361:8:8:304:0:0:0,-2.40824,-10 0/0:99:31:31:1136:0:0:0,-9.33193,-10 0/0:67.0979:14:14:532:0:0:0,-4.21442,-10 0/0:61.0773:12:12:454:0:0:0,-3.61236,-10 0/0:43.0155:6:6:226:0:0:0,-1.80618,-10 0/0:61.0773:12:12:421:0:0:0,-3.61236,-10 0/0:36.9949:4:4:147:0:0:0,-1.20412,-10 0/0:99:25:25:930:0:0:0,-7.52575,-10 0/0:99:32:32:1154:0:0:0,-9.63296,-10 0/0:76.1288:17:17:616:0:0:0,-5.11751,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:67.0979:14:14:493:0:0:0,-4.21442,-10 0/0:43.0155:6:6:228:0:0:0,-1.80618,-10 0/0:46.0258:7:7:217:0:0:0,-2.10721,-10 0/0:70.1082:15:15:534:0:0:0,-4.51545,-10 0/0:82.1494:19:19:679:0:0:0,-5.71957,-10 0/0:76.1288:17:17:579:0:0:0,-5.11751,-10 0/0:40.0052:5:5:189:0:0:0,-1.50515,-10 0/0:85.1595:20:20:668:0:0:0,-6.0206,-10 0/0:76.1288:17:17:615:0:0:0,-5.11751,-10 0/0:70.1082:15:15:551:0:0:0,-4.51545,-10 0/0:73.1185:16:16:598:0:0:0,-4.81648,-10 0/0:70.1082:15:15:527:0:0:0,-4.51545,-10 0/0:46.0258:7:7:266:0:0:0,-2.10721,-10 0/0:76.1288:17:17:642:0:0:0,-5.11751,-10 0/0:33.9846:3:3:114:0:0:0,-0.90309,-10 0/0:49.0361:8:8:290:0:0:0,-2.40824,-10 0/0:58.067:11:11:399:0:0:0,-3.31133,-10 0/0:58.067:11:11:393:0:0:0,-3.31133,-10 0/0:55.0567:11:10:329:0:0:0,-3.0103,-10 0/0:40.0052:5:5:190:0:0:0,-1.50515,-10 0/0:43.0155:6:6:224:0:0:0,-1.80618,-10 0/0:76.1288:17:17:616:0:0:0,-5.11751,-10 0/0:82.1494:19:19:687:0:0:0,-5.71957,-10 0/0:52.0464:9:9:342:0:0:0,-2.70927,-10 0/0:76.1288:17:17:617:0:0:0,-5.11751,-10 0/0:58.067:11:11:417:0:0:0,-3.31133,-10 0/0:88.17:21:21:786:0:0:0,-6.32163,-10 0/0:73.1185:16:16:561:0:0:0,-4.81648,-10 0/0:76.1288:17:17:569:0:0:0,-5.11751,-10 0/0:64.0876:13:13:461:0:0:0,-3.91339,-10 0/0:99:37:37:1342:0:0:0,-10,-10 0/0:79.1391:18:18:638:0:0:0,-5.41854,-10 0/0:46.0258:7:7:266:0:0:0,-2.10721,-10 0/0:91.1803:22:22:806:0:0:0,-6.62266,-10 0/0:64.0876:13:13:486:0:0:0,-3.91339,-10 0/0:99:40:40:1427:0:0:0,-10,-10 0/0:58.067:11:11:405:0:0:0,-3.31133,-10 0/0:36.9949:4:4:146:0:0:0,-1.20412,-10 0/0:99:29:29:1081:0:0:0,-8.72987,-10 0/0:58.067:11:11:410:0:0:0,-3.31133,-10 0/0:76.1288:17:17:608:0:0:0,-5.11751,-10 0/0:76.1288:17:17:635:0:0:0,-5.11751,-10 0/0:49.0361:8:8:278:0:0:0,-2.40824,-10 0/0:49.0361:8:8:292:0:0:0,-2.40824,-10 0/0:88.17:21:21:763:0:0:0,-6.32163,-10 0/0:58.067:11:11:408:0:0:0,-3.31133,-10 0/0:82.1494:19:19:693:0:0:0,-5.71957,-10 0/0:52.0464:9:9:342:0:0:0,-2.70927,-10 0/0:40.0052:5:5:190:0:0:0,-1.50515,-10 0/1:99:18:4:152:14:502:-10,0,-10 0/0:70.1082:15:15:494:0:0:0,-4.51545,-10 0/0:40.0052:5:5:190:0:0:0,-1.50515,-10 0/0:99:27:27:961:0:0:0,-8.12781,-10 0/0:55.0567:10:10:358:0:0:0,-3.0103,-10 0/0:58.067:11:11:375:0:0:0,-3.31133,-10 0/0:85.1595:20:20:735:0:0:0,-6.0206,-10 0/0:76.1288:17:17:610:0:0:0,-5.11751,-10 0/0:58.067:11:11:416:0:0:0,-3.31133,-10 0/0:91.1803:22:22:825:0:0:0,-6.62266,-10 0/0:49.0361:8:8:304:0:0:0,-2.40824,-10 0/0:52.0464:9:9:340:0:0:0,-2.70927,-10 0/0:61.0773:12:12:396:0:0:0,-3.61236,-10 0/0:36.9949:4:4:152:0:0:0,-1.20412,-10 0/0:43.0155:6:6:228:0:0:0,-1.80618,-10 0/0:97.2008:24:24:882:0:0:0,-7.22472,-10 0/0:76.1288:17:17:602:0:0:0,-5.11751,-10 0/0:79.1391:18:18:669:0:0:0,-5.41854,-10 0/0:58.067:11:11:406:0:0:0,-3.31133,-10 0/0:61.0773:12:12:455:0:0:0,-3.61236,-10 0/0:36.9949:4:4:143:0:0:0,-1.20412,-10 0/0:49.0361:8:8:284:0:0:0,-2.40824,-10 0/0:88.17:21:21:736:0:0:0,-6.32163,-10 0/0:49.0361:8:8:266:0:0:0,-2.40824,-10 0/0:67.0979:14:14:527:0:0:0,-4.21442,-10 0/1:38.7648:8:6:205:2:76:-6.25892,0,-10 0/0:67.0979:14:14:493:0:0:0,-4.21442,-10 scaffold_682 43195 . G A 296.86 . AB=0.65;ABP=6.91895;AC=1;AF=0.00543478;AN=184;AO=13;CIGAR=1X;DP=1295;DPB=1295;DPRA=1.42745;EPP=7.18621;EPPR=3.0103;GTI=0;LEN=1;MEANALT=1;MQM=60;MQMR=59.9477;NS=92;NUMALT=1;ODDS=4.61502;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=473;QR=47135;RO=1282;RPP=31.2394;RPPR=2786.84;RUN=1;SAF=4;SAP=7.18621;SAR=9;SRF=641;SRP=3.0103;SRR=641;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:50.2972:11:11:406:0:0:0,-3.31133,-10 0/0:47.2869:10:10:349:0:0:0,-3.0103,-10 0/0:56.3178:13:13:492:0:0:0,-3.91339,-10 0/0:50.2972:11:11:412:0:0:0,-3.31133,-10 0/0:50.2972:11:11:390:0:0:0,-3.31133,-10 0/0:44.2766:9:9:337:0:0:0,-2.70927,-10 0/0:71.3693:18:18:673:0:0:0,-5.41854,-10 0/0:56.3178:13:13:472:0:0:0,-3.91339,-10 0/0:44.2766:9:9:341:0:0:0,-2.70927,-10 0/0:32.2354:5:5:190:0:0:0,-1.50515,-10 0/0:35.2457:6:6:228:0:0:0,-1.80618,-10 0/0:23.2045:2:2:74:0:0:0,-0.60206,-7.03 0/0:92.441:25:25:918:0:0:0,-7.52575,-10 0/0:77.3899:20:20:728:0:0:0,-6.0206,-10 0/0:89.4309:24:24:857:0:0:0,-7.22472,-10 0/0:44.2766:9:9:310:0:0:0,-2.70927,-10 0/0:80.4002:21:21:764:0:0:0,-6.32163,-10 0/0:26.2148:3:3:114:0:0:0,-0.90309,-10 0/0:53.3075:12:12:448:0:0:0,-3.61236,-10 0/0:95.4508:26:26:955:0:0:0,-7.82678,-10 0/0:56.3178:13:13:481:0:0:0,-3.91339,-10 0/0:92.441:25:25:932:0:0:0,-7.52575,-10 0/0:29.2251:4:4:125:0:0:0,-1.20412,-10 0/0:71.3693:18:18:674:0:0:0,-5.41854,-10 0/0:50.2972:11:11:396:0:0:0,-3.31133,-10 0/0:71.3693:18:18:667:0:0:0,-5.41854,-10 0/0:47.2869:10:10:369:0:0:0,-3.0103,-10 0/0:50.2972:11:11:416:0:0:0,-3.31133,-10 0/0:68.359:17:17:627:0:0:0,-5.11751,-10 0/0:95.4508:26:26:948:0:0:0,-7.82678,-10 0/0:35.2457:6:6:228:0:0:0,-1.80618,-10 0/0:20.1942:1:1:38:0:0:0,-0.30103,-3.8 0/0:56.3178:13:13:471:0:0:0,-3.91339,-10 0/0:38.256:7:7:243:0:0:0,-2.10721,-10 0/0:56.3178:13:13:481:0:0:0,-3.91339,-10 0/0:32.2354:5:5:175:0:0:0,-1.50515,-10 0/0:38.256:7:7:266:0:0:0,-2.10721,-10 0/0:83.4105:22:22:819:0:0:0,-6.62266,-10 0/0:56.3178:13:13:442:0:0:0,-3.91339,-10 0/0:71.3693:18:18:658:0:0:0,-5.41854,-10 0/0:95.4508:26:26:954:0:0:0,-7.82678,-10 0/0:53.3075:12:12:442:0:0:0,-3.61236,-10 0/0:71.3693:18:18:673:0:0:0,-5.41854,-10 0/0:95.4508:26:26:974:0:0:0,-7.82678,-10 0/0:59.3281:14:14:497:0:0:0,-4.21442,-10 0/0:47.2869:10:10:378:0:0:0,-3.0103,-10 0/0:89.4309:24:24:883:0:0:0,-7.22472,-10 0/0:74.3796:19:19:716:0:0:0,-5.71957,-10 0/0:32.2354:5:5:164:0:0:0,-1.50515,-10 0/1:99:20:7:244:13:473:-10,0,-10 0/0:47.2869:10:10:356:0:0:0,-3.0103,-10 0/0:95.4508:26:26:966:0:0:0,-7.82678,-10 0/0:62.3384:15:15:559:0:0:0,-4.51545,-10 0/0:41.2663:8:8:304:0:0:0,-2.40824,-10 0/0:99:35:35:1280:0:0:0,-10,-10 0/0:53.3075:12:12:455:0:0:0,-3.61236,-10 0/0:89.4309:24:24:835:0:0:0,-7.22472,-10 0/0:35.2457:6:6:227:0:0:0,-1.80618,-10 0/0:44.2766:9:9:333:0:0:0,-2.70927,-10 0/0:38.256:7:7:265:0:0:0,-2.10721,-10 0/0:95.4508:26:26:956:0:0:0,-7.82678,-10 0/0:47.2869:10:10:375:0:0:0,-3.0103,-10 0/0:99:33:33:1199:0:0:0,-9.93399,-10 0/0:68.359:17:17:634:0:0:0,-5.11751,-10 0/0:41.2663:8:8:298:0:0:0,-2.40824,-10 0/0:71.3693:18:18:656:0:0:0,-5.41854,-10 0/0:50.2972:11:11:388:0:0:0,-3.31133,-10 0/0:50.2972:11:11:418:0:0:0,-3.31133,-10 0/0:98.4602:27:27:1005:0:0:0,-8.12781,-10 0/0:53.3075:12:12:429:0:0:0,-3.61236,-10 0/0:56.3178:13:13:493:0:0:0,-3.91339,-10 0/0:80.4002:21:21:783:0:0:0,-6.32163,-10 0/0:56.3178:13:13:494:0:0:0,-3.91339,-10 0/0:50.2972:11:11:385:0:0:0,-3.31133,-10 0/0:99:28:28:1029:0:0:0,-8.42884,-10 0/0:41.2663:8:8:304:0:0:0,-2.40824,-10 0/0:44.2766:9:9:335:0:0:0,-2.70927,-10 0/0:29.2251:4:4:152:0:0:0,-1.20412,-10 0/0:20.1942:1:1:38:0:0:0,-0.30103,-3.8 0/0:35.2457:6:6:228:0:0:0,-1.80618,-10 0/0:71.3693:18:18:679:0:0:0,-5.41854,-10 0/0:86.4207:23:23:856:0:0:0,-6.92369,-10 0/0:59.3281:14:14:521:0:0:0,-4.21442,-10 0/0:59.3281:14:14:496:0:0:0,-4.21442,-10 0/0:98.4602:27:27:975:0:0:0,-8.12781,-10 0/0:29.2251:4:4:150:0:0:0,-1.20412,-10 0/0:50.2972:11:11:408:0:0:0,-3.31133,-10 0/0:50.2972:11:11:416:0:0:0,-3.31133,-10 0/0:35.2457:6:6:219:0:0:0,-1.80618,-10 0/0:50.2972:11:11:414:0:0:0,-3.31133,-10 0/0:59.3281:14:14:498:0:0:0,-4.21442,-10 0/0:56.3178:13:13:485:0:0:0,-3.91339,-10 scaffold_765 23903 . C A 346.983 . AB=0.457143;ABP=3.56868;AC=3;AF=0.0163043;AN=184;AO=16;CIGAR=1X;DP=1029;DPB=1029;DPRA=1.0446;EPP=5.18177;EPPR=5.3493;GTI=1;LEN=1;MEANALT=1;MQM=45.5;MQMR=57.7953;NS=92;NUMALT=1;ODDS=6.51228;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=601;QR=36957;RO=1011;RPP=37.7539;RPPR=2172.39;RUN=1;SAF=6;SAP=5.18177;SAR=10;SRF=525;SRP=6.27717;SRR=486;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:43.3699:6:6:223:0:0:0,-1.80618,-10 0/0:43.3699:6:6:205:0:0:0,-1.80618,-10 0/0:58.4214:11:11:385:0:0:0,-3.31133,-10 0/0:46.3802:7:7:266:0:0:0,-2.10721,-10 0/0:49.3905:8:8:280:0:0:0,-2.40824,-10 0/0:43.3699:6:6:212:0:0:0,-1.80618,-10 0/0:76.4832:17:17:578:0:0:0,-5.11751,-10 0/0:61.4317:12:12:444:0:0:0,-3.61236,-10 0/0:43.3699:6:6:228:0:0:0,-1.80618,-10 0/0:28.3184:1:1:38:0:0:0,-0.30103,-3.8 0/0:40.3596:5:5:161:0:0:0,-1.50515,-10 0/0:34.339:3:3:114:0:0:0,-0.90309,-10 0/0:70.4626:15:15:564:0:0:0,-4.51545,-10 0/0:94.5452:23:23:850:0:0:0,-6.92369,-10 0/0:55.4111:10:10:378:0:0:0,-3.0103,-10 0/0:55.4111:10:10:364:0:0:0,-3.0103,-10 0/0:67.4523:14:14:525:0:0:0,-4.21442,-10 0/0:40.3596:5:5:190:0:0:0,-1.50515,-10 0/0:58.4214:11:11:404:0:0:0,-3.31133,-10 0/0:99:27:27:998:0:0:0,-8.12781,-10 0/0:52.4008:9:9:320:0:0:0,-2.70927,-10 0/0:79.4935:18:18:640:0:0:0,-5.41854,-10 0/0:37.3493:4:4:150:0:0:0,-1.20412,-10 0/0:73.4729:16:16:574:0:0:0,-4.81648,-10 0/0:64.442:13:13:492:0:0:0,-3.91339,-10 0/0:67.4523:14:14:519:0:0:0,-4.21442,-10 0/0:58.4214:11:11:414:0:0:0,-3.31133,-10 0/0:61.4317:12:12:453:0:0:0,-3.61236,-10 0/0:64.442:13:13:464:0:0:0,-3.91339,-10 0/0:82.5038:19:19:703:0:0:0,-5.71957,-10 0/0:34.339:3:3:114:0:0:0,-0.90309,-10 0/0:31.3287:2:2:76:0:0:0,-0.60206,-7.22 0/0:73.4729:16:16:584:0:0:0,-4.81648,-10 0/0:31.3287:3:2:76:0:0:0,-0.60206,-6.84 0/0:61.4317:12:12:448:0:0:0,-3.61236,-10 0/0:43.3699:6:6:228:0:0:0,-1.80618,-10 0/0:58.4214:11:11:410:0:0:0,-3.31133,-10 0/0:52.4008:9:9:308:0:0:0,-2.70927,-10 0/0:49.3905:8:8:246:0:0:0,-2.40824,-10 0/0:67.4523:14:14:522:0:0:0,-4.21442,-10 0/0:61.4317:12:12:451:0:0:0,-3.61236,-10 0/0:58.4214:11:11:414:0:0:0,-3.31133,-10 0/0:61.4317:12:12:453:0:0:0,-3.61236,-10 0/0:97.5528:24:24:884:0:0:0,-7.22472,-10 0/0:67.4523:14:14:532:0:0:0,-4.21442,-10 0/0:37.3493:4:4:151:0:0:0,-1.20412,-10 0/0:97.5528:24:24:825:0:0:0,-7.22472,-10 0/0:76.4832:17:17:620:0:0:0,-5.11751,-10 0/0:52.4008:9:9:298:0:0:0,-2.70927,-10 0/0:94.5452:23:23:810:0:0:0,-6.92369,-10 0/0:49.3905:8:8:273:0:0:0,-2.40824,-10 0/0:76.4832:17:17:634:0:0:0,-5.11751,-10 0/0:52.4008:9:9:342:0:0:0,-2.70927,-10 0/0:43.3699:6:6:228:0:0:0,-1.80618,-10 0/0:88.5241:21:21:748:0:0:0,-6.32163,-10 0/0:43.3699:6:6:227:0:0:0,-1.80618,-10 0/0:55.4111:10:10:376:0:0:0,-3.0103,-10 0/0:34.339:3:3:112:0:0:0,-0.90309,-10 0/0:64.442:13:13:482:0:0:0,-3.91339,-10 0/0:43.3699:6:6:220:0:0:0,-1.80618,-10 0/1:99:21:13:468:8:299:-10,0,-10 0/0:76.4832:17:17:645:0:0:0,-5.11751,-10 0/0:91.5341:22:22:804:0:0:0,-6.62266,-10 0/0:55.4111:10:10:379:0:0:0,-3.0103,-10 0/0:46.3802:7:7:258:0:0:0,-2.10721,-10 0/0:64.442:13:13:494:0:0:0,-3.91339,-10 0/0:70.4626:15:15:569:0:0:0,-4.51545,-10 0/1:3.03325e-05:6:0:0:6:226:-10,-1.80618,0 0/0:70.4626:15:15:524:0:0:0,-4.51545,-10 0/0:64.442:13:13:447:0:0:0,-3.91339,-10 0/0:64.442:13:13:466:0:0:0,-3.91339,-10 0/0:76.4832:17:17:599:0:0:0,-5.11751,-10 0/0:67.4523:14:14:526:0:0:0,-4.21442,-10 0/0:61.4317:12:12:444:0:0:0,-3.61236,-10 0/0:70.4626:15:15:553:0:0:0,-4.51545,-10 0/0:49.3905:8:8:302:0:0:0,-2.40824,-10 0/0:46.3802:7:7:243:0:0:0,-2.10721,-10 0/0:40.3596:5:5:190:0:0:0,-1.50515,-10 0/0:34.339:3:3:92:0:0:0,-0.90309,-8.58667 0/0:46.3802:8:7:266:0:0:0,-2.10721,-10 0/0:79.4935:18:18:677:0:0:0,-5.41854,-10 0/0:79.4935:18:18:669:0:0:0,-5.41854,-10 0/0:76.4832:17:17:618:0:0:0,-5.11751,-10 0/0:64.442:13:13:469:0:0:0,-3.91339,-10 0/1:35.0644:8:6:205:2:76:-6.25892,0,-10 0/0:31.3287:2:2:74:0:0:0,-0.60206,-7.03 0/0:64.442:13:13:488:0:0:0,-3.91339,-10 0/0:52.4008:9:9:341:0:0:0,-2.70927,-10 0/0:28.3184:1:1:36:0:0:0,-0.30103,-3.6 0/0:55.4111:10:10:351:0:0:0,-3.0103,-10 0/0:52.4008:9:9:342:0:0:0,-2.70927,-10 0/0:40.3596:5:5:190:0:0:0,-1.50515,-10 scaffold_976 14680 . G A 134.189 . AB=0.291667;ABP=12.0581;AC=1;AF=0.00537634;AN=186;AO=9;CIGAR=1X;DP=2491;DPB=2491;DPRA=1.11157;EPP=5.18177;EPPR=4.14507;GTI=0;LEN=1;MEANALT=1;MQM=51.6667;MQMR=51.8653;NS=93;NUMALT=1;ODDS=15.2018;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=287;QR=89398;RO=2480;RPP=22.5536;RPPR=5379.58;RUN=1;SAF=3;SAP=5.18177;SAR=6;SRF=1257;SRP=4.02249;SRR=1223;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:31:31:1059:0:0:0,-9.33193,-10 0/0:99:18:18:638:0:0:0,-5.41854,-10 0/0:99:22:22:796:0:0:0,-6.62266,-10 0/0:99:21:21:765:0:0:0,-6.32163,-10 0/0:99:13:13:464:0:0:0,-3.91339,-10 0/0:99:17:17:573:0:0:0,-5.11751,-10 0/0:99:33:33:1217:0:0:0,-9.93399,-10 0/0:99:28:28:1018:0:0:0,-8.42884,-10 0/0:99:28:28:1018:0:0:0,-8.42884,-10 0/0:87.0927:8:8:290:0:0:0,-2.40824,-10 0/0:99:20:20:737:0:0:0,-6.0206,-10 0/0:99:13:13:417:0:0:0,-3.91339,-10 0/0:99:27:27:967:0:0:0,-8.12781,-10 0/0:99:18:18:669:0:0:0,-5.41854,-10 0/0:99:15:15:556:0:0:0,-4.51545,-10 0/0:99:18:18:648:0:0:0,-5.41854,-10 0/0:99:20:20:721:0:0:0,-6.0206,-10 0/0:93.1132:10:10:355:0:0:0,-3.0103,-10 0/0:99:19:19:699:0:0:0,-5.71957,-10 0/0:99:32:31:1148:1:16:0,-6.52781,-10 0/0:99:19:19:661:0:0:0,-5.71957,-10 0/0:99:36:36:1325:0:0:0,-10,-10 0/0:99:27:27:963:0:0:0,-8.12781,-10 0/0:99:20:20:675:0:0:0,-6.0206,-10 0/0:99:54:54:1971:0:0:0,-10,-10 0/0:99:35:34:1242:0:0:0,-10,-10 0/0:99:52:52:1861:0:0:0,-10,-10 0/0:99:35:35:1270:0:0:0,-10,-10 0/0:99:45:45:1651:0:0:0,-10,-10 0/0:99:44:44:1578:0:0:0,-10,-10 0/0:99:24:24:880:0:0:0,-7.22472,-10 0/0:99:20:20:721:0:0:0,-6.0206,-10 0/0:99:25:25:923:0:0:0,-7.52575,-10 0/0:99:15:15:527:0:0:0,-4.51545,-10 0/0:99:30:30:1121:0:0:0,-9.0309,-10 0/0:99:16:16:580:0:0:0,-4.81648,-10 0/0:99:26:26:915:0:0:0,-7.82678,-10 0/0:99:28:28:1054:0:0:0,-8.42884,-10 0/0:99:29:29:1076:0:0:0,-8.72987,-10 0/0:99:13:13:411:0:0:0,-3.91339,-10 0/0:99:45:45:1665:0:0:0,-10,-10 0/0:99:52:52:1929:0:0:0,-10,-10 0/0:99:43:43:1568:0:0:0,-10,-10 0/0:99:30:30:1046:0:0:0,-9.0309,-10 0/0:99:29:29:989:0:0:0,-8.72987,-10 0/0:99:21:21:736:0:0:0,-6.32163,-10 0/0:99:47:47:1678:0:0:0,-10,-10 0/0:99:23:23:850:0:0:0,-6.92369,-10 0/0:99:29:29:1079:0:0:0,-8.72987,-10 0/0:99:44:44:1593:0:0:0,-10,-10 0/0:99:24:24:831:0:0:0,-7.22472,-10 0/0:99:46:46:1660:0:0:0,-10,-10 0/0:99:24:24:885:0:0:0,-7.22472,-10 0/0:99:12:12:402:0:0:0,-3.61236,-10 0/0:99:50:50:1722:0:0:0,-10,-10 0/0:99:34:34:1275:0:0:0,-10,-10 0/0:99:19:19:651:0:0:0,-5.71957,-10 0/0:90.103:9:9:332:0:0:0,-2.70927,-10 0/0:99:28:28:996:0:0:0,-8.42884,-10 0/0:99:14:14:463:0:0:0,-4.21442,-10 0/0:99:39:39:1405:0:0:0,-10,-10 0/0:99:31:31:1154:0:0:0,-9.33193,-10 0/0:99:40:40:1384:0:0:0,-10,-10 0/0:99:25:25:887:0:0:0,-7.52575,-10 0/0:99:24:24:909:0:0:0,-7.22472,-10 0/0:99:33:32:1158:1:16:0,-6.81548,-10 0/0:90.103:9:9:342:0:0:0,-2.70927,-10 0/0:99:16:15:549:0:0:0,-4.51545,-10 0/0:99:43:43:1575:0:0:0,-10,-10 0/0:99:21:21:748:0:0:0,-6.32163,-10 0/0:99:33:33:1186:0:0:0,-9.93399,-10 0/0:99:39:39:1439:0:0:0,-10,-10 0/1:99:24:17:604:7:255:-10,0,-10 0/0:99:47:47:1709:0:0:0,-10,-10 0/0:99:35:35:1250:0:0:0,-10,-10 0/0:99:28:28:1014:0:0:0,-8.42884,-10 0/0:99:20:20:628:0:0:0,-6.0206,-10 0/0:99:32:32:1181:0:0:0,-9.63296,-10 0/0:99:13:13:467:0:0:0,-3.91339,-10 0/0:99:23:23:851:0:0:0,-6.92369,-10 0/0:99:34:34:1207:0:0:0,-10,-10 0/0:99:25:25:918:0:0:0,-7.52575,-10 0/0:99:26:26:920:0:0:0,-7.82678,-10 0/0:99:25:25:904:0:0:0,-7.52575,-10 0/0:99:26:26:948:0:0:0,-7.82678,-10 0/0:99:12:12:420:0:0:0,-3.61236,-10 0/0:99:38:38:1395:0:0:0,-10,-10 0/0:99:29:29:1064:0:0:0,-8.72987,-10 0/0:81.0721:6:6:224:0:0:0,-1.80618,-10 0/0:99:22:22:771:0:0:0,-6.62266,-10 0/0:99:20:20:745:0:0:0,-6.0206,-10 0/0:99:25:25:908:0:0:0,-7.52575,-10 scaffold_2058 1433 . G T 358.219 . AB=0.24359;ABP=47.5533;AC=2;AF=0.0108696;AN=184;AO=25;CIGAR=1X;DP=3836;DPB=3836;DPRA=0.993071;EPP=7.26639;EPPR=17.9757;GTI=1;LEN=1;MEANALT=1.14286;MQM=57.28;MQMR=59.9328;NS=92;NUMALT=1;ODDS=9.00584;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=826;QR=139055;RO=3808;RPP=57.2971;RPPR=8185.35;RUN=1;SAF=9;SAP=7.26639;SAR=16;SRF=1827;SRP=16.5341;SRR=1981;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:37:37:1393:0:0:0,-10,-10 0/0:99:11:11:372:0:0:0,-3.31133,-10 0/0:99:44:44:1587:0:0:0,-10,-10 0/0:99:26:26:952:0:0:0,-7.82678,-10 0/0:0.000532807:22:20:737:2:76:-2.96095,0,-10 0/0:99:18:18:642:0:0:0,-5.41854,-10 0/0:99:74:74:2700:0:0:0,-10,-10 0/0:99:50:50:1845:0:0:0,-10,-10 0/0:99:26:26:898:0:0:0,-7.82678,-10 0/0:99:8:8:300:0:0:0,-2.40824,-10 0/0:99:14:14:512:0:0:0,-4.21442,-10 0/0:99:19:19:711:0:0:0,-5.71957,-10 0/0:99:60:60:2156:0:0:0,-10,-10 0/0:99:85:85:3124:0:0:0,-10,-10 0/0:99:52:52:1925:0:0:0,-10,-10 0/0:99:44:44:1570:0:0:0,-10,-10 0/0:99:51:51:1829:0:0:0,-10,-10 0/0:99:18:18:650:0:0:0,-5.41854,-10 0/0:99:56:56:2048:0:0:0,-10,-10 0/0:99:97:97:3553:0:0:0,-10,-10 0/0:99:41:41:1467:0:0:0,-10,-10 0/0:99:54:54:1992:0:0:0,-10,-10 0/0:99:25:25:925:0:0:0,-7.52575,-10 0/1:99:40:31:1136:9:336:-10,0,-10 0/0:99:40:40:1419:0:0:0,-10,-10 0/0:99:46:46:1698:0:0:0,-10,-10 0/0:99:42:42:1570:0:0:0,-10,-10 0/0:99:28:28:1037:0:0:0,-8.42884,-10 0/0:99:46:45:1624:1:16:0,-10,-10 0/0:99:75:74:2721:0:0:0,-10,-10 0/0:99:7:7:243:0:0:0,-2.10721,-10 0/0:99:9:9:313:0:0:0,-2.70927,-10 0/0:99:37:36:1365:1:16:0,-7.96991,-10 0/0:99:21:21:777:0:0:0,-6.32163,-10 0/0:99:28:28:1022:0:0:0,-8.42884,-10 0/0:99:18:18:650:0:0:0,-5.41854,-10 0/0:99:15:15:553:0:0:0,-4.51545,-10 0/0:99:52:52:1948:0:0:0,-10,-10 0/0:99:34:34:1250:0:0:0,-10,-10 0/0:99:28:28:1025:0:0:0,-8.42884,-10 0/0:99:74:74:2734:0:0:0,-10,-10 0/0:99:37:37:1332:0:0:0,-10,-10 0/0:99:45:45:1670:0:0:0,-10,-10 0/0:99:101:101:3729:0:0:0,-10,-10 0/0:99:54:54:1925:0:0:0,-10,-10 0/0:99:35:35:1262:0:0:0,-10,-10 0/0:99:104:104:3767:0:0:0,-10,-10 0/0:99:58:57:2105:1:16:0,-10,-10 0/0:99:27:27:997:0:0:0,-8.12781,-10 0/0:99:65:65:2341:0:0:0,-10,-10 0/0:99:17:17:566:0:0:0,-5.11751,-10 0/0:99:83:83:3069:0:0:0,-10,-10 0/0:99:34:34:1202:0:0:0,-10,-10 0/0:99:12:12:425:0:0:0,-3.61236,-10 0/0:99:90:90:3268:0:0:0,-10,-10 0/0:99:35:35:1290:0:0:0,-10,-10 0/1:99:38:28:1014:10:350:-10,0,-10 0/0:99:13:13:462:0:0:0,-3.91339,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:99:27:27:935:0:0:0,-8.12781,-10 0/0:99:72:72:2662:0:0:0,-10,-10 0/0:99:49:49:1758:0:0:0,-10,-10 0/0:99:95:94:3410:0:0:0,-10,-10 0/0:99:46:46:1696:0:0:0,-10,-10 0/0:99:39:39:1456:0:0:0,-10,-10 0/0:99:52:52:1896:0:0:0,-10,-10 0/0:99:55:55:2006:0:0:0,-10,-10 0/0:99:20:20:749:0:0:0,-6.0206,-10 0/0:99:75:75:2734:0:0:0,-10,-10 0/0:99:17:17:629:0:0:0,-5.11751,-10 0/0:99:42:42:1521:0:0:0,-10,-10 0/0:99:73:73:2694:0:0:0,-10,-10 0/0:99:50:50:1825:0:0:0,-10,-10 0/0:99:37:37:1384:0:0:0,-10,-10 0/0:99:63:63:2234:0:0:0,-10,-10 0/0:99:37:37:1371:0:0:0,-10,-10 0/0:99:26:26:945:0:0:0,-7.82678,-10 0/0:99:25:25:895:0:0:0,-7.52575,-10 0/0:99:15:15:540:0:0:0,-4.51545,-10 0/0:99:32:32:1180:0:0:0,-9.63296,-10 0/0:99:68:68:2522:0:0:0,-10,-10 0/0:99:41:41:1475:0:0:0,-10,-10 0/0:99:49:47:1684:1:16:0,-10,-10 0/0:99:46:46:1721:0:0:0,-10,-10 0/0:99:59:59:2184:0:0:0,-10,-10 0/0:99:7:7:262:0:0:0,-2.10721,-10 0/0:99:37:37:1329:0:0:0,-10,-10 0/0:99:21:21:790:0:0:0,-6.32163,-10 0/0:99:12:12:451:0:0:0,-3.61236,-10 0/0:99:35:35:1256:0:0:0,-10,-10 0/0:99:28:28:1026:0:0:0,-8.42884,-10 0/0:99:33:33:1225:0:0:0,-9.93399,-10 scaffold_2225 1249 . G A 257.044 . AB=0.271186;ABP=29.8409;AC=3;AF=0.0163043;AN=184;AO=17;CIGAR=1X;DP=2625;DPB=2625;DPRA=0.763106;EPP=4.1599;EPPR=41.141;GTI=0;LEN=1;MEANALT=1;MQM=54.8235;MQMR=41.6035;NS=92;NUMALT=1;ODDS=7.07734;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=579;QR=95650;RO=2608;RPP=39.9253;RPPR=5666.21;RUN=1;SAF=7;SAP=4.1599;SAR=10;SRF=1197;SRP=41.141;SRR=1411;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:25:25:923:0:0:0,-7.52575,-10 0/0:99:23:23:838:0:0:0,-6.92369,-10 0/0:99:28:28:1030:0:0:0,-8.42884,-10 0/0:99:34:34:1251:0:0:0,-10,-10 0/0:87.784:8:8:286:0:0:0,-2.40824,-10 0/0:99:22:22:824:0:0:0,-6.62266,-10 0/0:99:42:42:1522:0:0:0,-10,-10 0/0:99:39:39:1421:0:0:0,-10,-10 0/0:99:25:25:929:0:0:0,-7.52575,-10 0/0:66.7121:1:1:38:0:0:0,-0.30103,-3.8 0/0:87.784:8:8:304:0:0:0,-2.40824,-10 0/0:99:13:13:444:0:0:0,-3.91339,-10 0/0:99:24:24:891:0:0:0,-7.22472,-10 0/0:99:22:22:790:0:0:0,-6.62266,-10 0/0:99:32:32:1145:0:0:0,-9.63296,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:99:15:15:566:0:0:0,-4.51545,-10 0/0:99:22:22:803:0:0:0,-6.62266,-10 0/0:99:24:24:882:0:0:0,-7.22472,-10 0/0:99:27:27:1008:0:0:0,-8.12781,-10 0/0:99:28:28:1024:0:0:0,-8.42884,-10 0/0:99:49:49:1787:0:0:0,-10,-10 0/0:99:41:41:1498:0:0:0,-10,-10 0/0:99:24:24:881:0:0:0,-7.22472,-10 0/0:99:17:17:640:0:0:0,-5.11751,-10 0/0:99:30:30:1130:0:0:0,-9.0309,-10 0/0:99:42:42:1575:0:0:0,-10,-10 0/0:99:25:25:923:0:0:0,-7.52575,-10 0/0:99:33:33:1235:0:0:0,-9.93399,-10 0/0:99:49:49:1807:0:0:0,-10,-10 0/0:99:15:15:537:0:0:0,-4.51545,-10 0/0:99:30:30:1095:0:0:0,-9.0309,-10 0/0:99:43:43:1609:0:0:0,-10,-10 0/0:99:19:19:693:0:0:0,-5.71957,-10 0/0:99:44:44:1603:0:0:0,-10,-10 0/0:87.784:8:8:299:0:0:0,-2.40824,-10 0/1:99:34:24:845:10:336:-10,0,-10 0/0:99:28:28:1044:0:0:0,-8.42884,-10 0/0:99:44:44:1607:0:0:0,-10,-10 0/0:99:18:18:669:0:0:0,-5.41854,-10 0/0:99:32:32:1178:0:0:0,-9.63296,-10 0/0:99:40:40:1487:0:0:0,-10,-10 0/0:99:40:40:1497:0:0:0,-10,-10 0/0:99:26:26:931:0:0:0,-7.82678,-10 0/0:99:22:22:803:0:0:0,-6.62266,-10 0/0:99:18:18:661:0:0:0,-5.41854,-10 0/0:99:67:67:2508:0:0:0,-10,-10 0/0:99:27:27:948:0:0:0,-8.12781,-10 0/0:99:34:34:1245:0:0:0,-10,-10 0/0:99:28:28:978:0:0:0,-8.42884,-10 0/0:99:22:22:805:0:0:0,-6.62266,-10 0/0:99:32:32:1142:0:0:0,-9.63296,-10 0/0:99:24:24:885:0:0:0,-7.22472,-10 0/0:99:16:16:567:0:0:0,-4.81648,-10 0/0:99:56:56:2062:0:0:0,-10,-10 0/0:99:31:31:1127:0:0:0,-9.33193,-10 0/0:99:12:12:444:0:0:0,-3.61236,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:99:34:34:1223:0:0:0,-10,-10 0/0:99:37:37:1375:0:0:0,-10,-10 0/0:99:32:32:1168:0:0:0,-9.63296,-10 0/0:99:47:47:1750:0:0:0,-10,-10 0/0:99:37:37:1383:0:0:0,-10,-10 0/0:99:25:25:914:0:0:0,-7.52575,-10 0/0:99:23:23:860:0:0:0,-6.92369,-10 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:99:36:36:1310:0:0:0,-10,-10 0/0:99:15:15:553:0:0:0,-4.51545,-10 0/0:99:25:25:906:0:0:0,-7.52575,-10 0/0:99:12:12:424:0:0:0,-3.61236,-10 0/0:99:59:59:2148:0:0:0,-10,-10 0/0:99:26:26:966:0:0:0,-7.82678,-10 0/0:99:41:41:1510:0:0:0,-10,-10 0/0:99:41:41:1530:0:0:0,-10,-10 0/0:99:58:58:2119:0:0:0,-10,-10 0/0:99:13:13:460:0:0:0,-3.91339,-10 0/0:99:34:34:1217:0:0:0,-10,-10 0/0:99:29:29:1085:0:0:0,-8.72987,-10 0/0:99:18:18:653:0:0:0,-5.41854,-10 0/0:99:18:18:666:0:0:0,-5.41854,-10 0/0:99:34:34:1270:0:0:0,-10,-10 0/0:99:30:30:1134:0:0:0,-9.0309,-10 0/0:99:37:37:1399:0:0:0,-10,-10 0/0:99:29:28:999:1:15:0,-5.76747,-10 0/0:99:30:30:1122:0:0:0,-9.0309,-10 0/0:99:12:12:436:0:0:0,-3.61236,-10 0/0:99:30:30:1112:0:0:0,-9.0309,-10 0/0:99:24:24:859:0:0:0,-7.22472,-10 0/1:36.3359:11:8:280:3:114:-9.54615,0,-10 0/0:99:17:17:629:0:0:0,-5.11751,-10 0/1:30.7412:14:11:340:3:114:-8.98668,0,-10 0/0:99:32:32:1143:0:0:0,-9.63296,-10 scaffold_2706 799 . G A 1030.06 . AB=0.180851;ABP=335.661;AC=9;AF=0.048913;AN=184;AO=138;CIGAR=1X;DP=4757;DPB=4757;DPRA=1.08861;EPP=285.553;EPPR=8551.78;GTI=10;LEN=1;MEANALT=1.06897;MQM=23.7971;MQMR=26.2133;NS=92;NUMALT=1;ODDS=0.408071;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=5005;QR=167942;RO=4614;RPP=173.203;RPPR=3567.3;RUN=1;SAF=119;SAP=160.363;SAR=19;SRF=3509;SRP=2722.86;SRR=1105;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:57:56:2039:1:16:0,-10,-10 0/0:99:9:9:334:0:0:0,-2.70927,-10 0/1:99:33:25:941:8:302:-10,0,-10 0/0:99:26:26:965:0:0:0,-7.82678,-10 0/0:99:13:13:458:0:0:0,-3.91339,-10 0/0:99:55:55:2008:0:0:0,-10,-10 0/0:99:132:124:4552:8:277:0,-2.19456,-10 0/0:99:49:49:1789:0:0:0,-10,-10 0/0:99:25:25:939:0:0:0,-7.52575,-10 0/0:99:9:9:312:0:0:0,-2.70927,-10 0/0:99:20:20:733:0:0:0,-6.0206,-10 0/0:99:38:37:1393:1:16:0,-8.25936,-10 0/0:99:42:42:1510:0:0:0,-10,-10 0/0:99:44:44:1566:0:0:0,-10,-10 0/0:99:44:44:1575:0:0:0,-10,-10 0/0:1.91772e-07:21:19:698:2:76:-3.22059,0,-10 0/0:99:41:40:1447:1:38:0,-6.92945,-10 0/0:99:31:31:1065:0:0:0,-9.33193,-10 0/0:99:42:42:1557:0:0:0,-10,-10 0/1:99:35:28:1001:7:264:-10,0,-10 0/0:99:47:47:1709:0:0:0,-10,-10 0/0:99:72:72:2612:0:0:0,-10,-10 0/0:99:49:49:1795:0:0:0,-10,-10 0/0:99:29:29:1042:0:0:0,-8.72987,-10 0/0:99:131:131:4732:0:0:0,-10,-10 0/0:0.00147438:83:76:2711:7:253:-7.76419,0,-10 0/0:99:67:67:2401:0:0:0,-10,-10 0/0:99:50:50:1813:0:0:0,-10,-10 0/0:99:45:45:1670:0:0:0,-10,-10 0/0:99:67:67:2445:0:0:0,-10,-10 0/0:99:32:32:1143:0:0:0,-9.63296,-10 0/0:99:37:37:1346:0:0:0,-10,-10 0/0:99:64:64:2259:0:0:0,-10,-10 0/1:11.843:22:18:668:4:145:-10,0,-10 0/0:99:51:51:1900:0:0:0,-10,-10 0/0:99:28:28:1064:0:0:0,-8.42884,-10 0/0:99:71:70:2496:0:0:0,-10,-10 0/0:99:17:17:612:0:0:0,-5.11751,-10 0/0:0.762501:73:65:2419:7:253:-10,0,-10 0/0:99:30:29:1090:1:37:0,-3.85378,-10 0/0:99:95:95:3518:0:0:0,-10,-10 0/0:99:49:49:1753:0:0:0,-10,-10 0/0:99:59:59:2190:0:0:0,-10,-10 0/0:99:75:75:2774:0:0:0,-10,-10 0/1:99:37:30:1105:7:266:-10,0,-10 0/0:99:27:27:992:0:0:0,-8.12781,-10 0/0:99:54:54:1972:0:0:0,-10,-10 0/0:99:46:46:1609:0:0:0,-10,-10 0/0:99:84:84:3069:0:0:0,-10,-10 0/0:99:84:84:3007:0:0:0,-10,-10 0/0:99:43:43:1567:0:0:0,-10,-10 0/1:66.2422:36:30:1079:6:228:-10,0,-10 0/0:99:31:31:1096:0:0:0,-9.33193,-10 0/0:99:41:41:1489:0:0:0,-10,-10 0/0:99:90:89:3289:1:16:0,-10,-10 0/0:0.0035605:67:61:2199:6:220:-7.99677,0,-10 0/0:99:63:63:2259:0:0:0,-10,-10 0/0:99:18:18:664:0:0:0,-5.41854,-10 0/0:99:75:75:2721:0:0:0,-10,-10 0/0:99:57:57:2052:0:0:0,-10,-10 0/1:99:29:23:858:6:227:-10,0,-10 0/0:1.34052e-05:61:56:2063:5:185:-5.43162,0,-10 0/0:99:98:97:3521:0:0:0,-10,-10 0/0:3.15053e-08:24:22:819:2:76:-2.43619,0,-10 0/0:99:87:87:3210:0:0:0,-10,-10 0/0:99:50:50:1838:0:0:0,-10,-10 0/0:99:23:23:816:0:0:0,-6.92369,-10 0/0:99:49:49:1657:0:0:0,-10,-10 0/1:99:72:63:2311:9:338:-10,0,-10 0/0:99:42:42:1532:0:0:0,-10,-10 0/0:99:103:103:3661:0:0:0,-10,-10 0/0:99:93:93:3356:0:0:0,-10,-10 0/0:99:45:45:1597:0:0:0,-10,-10 0/0:99:112:111:4105:1:16:0,-10,-10 0/0:99:75:75:2735:0:0:0,-10,-10 0/0:99:61:60:2197:0:0:0,-10,-10 0/0:99:57:57:2161:0:0:0,-10,-10 0/0:1.28476e-10:81:76:2775:5:189:-0.413177,0,-10 0/0:99:22:21:770:1:38:0,-1.48024,-10 0/0:99:62:60:2228:2:76:0,-8.16717,-10 0/0:99:89:83:3070:5:188:0,-1.79762,-10 0/0:2.77238e-05:57:52:1826:5:177:-5.7472,0,-10 0/0:1.42718:34:29:1078:5:165:-10,0,-10 0/0:0.00167493:38:34:1224:4:151:-7.3965,0,-10 0/0:99:38:38:1423:0:0:0,-10,-10 0/0:99:17:17:592:0:0:0,-5.11751,-10 0/0:99:80:80:2952:0:0:0,-10,-10 0/0:99:45:45:1612:0:0:0,-10,-10 0/0:99:8:8:291:0:0:0,-2.40824,-10 0/0:99:31:31:1098:0:0:0,-9.33193,-10 0/1:11.5058:45:40:1480:5:188:-9.83664,0,-10 0/1:99:67:51:1873:16:584:-10,0,-10 scaffold_2706 810 . G A 411.896 . AB=0.229508;ABP=80.5425;AC=4;AF=0.0217391;AN=184;AO=48;CIGAR=1X;DP=4755;DPB=4755;DPRA=0.967389;EPP=43.7254;EPPR=2820.04;GTI=3;LEN=1;MEANALT=1.23077;MQM=22.8333;MQMR=26.1781;NS=92;NUMALT=1;ODDS=3.97951;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=1680;QR=168464;RO=4699;RPP=107.241;RPPR=10206.8;RUN=1;SAF=39;SAP=43.7254;SAR=9;SRF=3584;SRP=2820.04;SRR=1115;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:57:57:2088:0:0:0,-10,-10 0/0:99:9:9:330:0:0:0,-2.70927,-10 0/0:99:33:33:1213:0:0:0,-9.93399,-10 0/0:99:26:25:898:0:0:0,-7.52575,-10 0/0:99:13:13:458:0:0:0,-3.91339,-10 0/0:99:55:55:2008:0:0:0,-10,-10 0/0:99:132:132:4790:0:0:0,-10,-10 0/0:99:49:49:1759:0:0:0,-10,-10 0/0:99:25:25:907:0:0:0,-7.52575,-10 0/0:99:9:9:294:0:0:0,-2.70927,-10 0/0:99:20:20:680:0:0:0,-6.0206,-10 0/0:99:38:38:1355:0:0:0,-10,-10 0/0:99:42:42:1522:0:0:0,-10,-10 0/0:99:44:44:1556:0:0:0,-10,-10 0/0:99:44:44:1537:0:0:0,-10,-10 0/0:99:21:20:707:1:15:0,-3.49941,-10 0/1:99:41:32:1063:9:342:-10,0,-10 0/0:99:31:31:1074:0:0:0,-9.33193,-10 0/0:99:42:42:1499:0:0:0,-10,-10 0/1:17.3632:35:30:1026:5:187:-10,0,-10 0/0:5.09385e-08:47:43:1588:4:126:-2.7579,0,-10 0/0:99:72:71:2566:1:38:0,-10,-10 0/0:99:49:49:1732:0:0:0,-10,-10 0/1:99:29:22:748:7:248:-10,0,-10 0/0:99:131:130:4649:0:0:0,-10,-10 0/0:99:83:83:2924:0:0:0,-10,-10 0/0:99:67:67:2384:0:0:0,-10,-10 0/0:99:50:50:1813:0:0:0,-10,-10 0/0:99:45:44:1561:1:38:0,-8.09314,-10 0/0:99:67:67:2346:0:0:0,-10,-10 0/0:99:32:32:1102:0:0:0,-9.63296,-10 0/0:99:37:37:1299:0:0:0,-10,-10 0/0:99:64:63:2230:1:38:0,-10,-10 0/0:99:22:22:753:0:0:0,-6.62266,-10 0/0:99:51:51:1838:0:0:0,-10,-10 0/0:99:28:28:1057:0:0:0,-8.42884,-10 0/0:99:71:71:2560:0:0:0,-10,-10 0/1:99:17:10:350:7:261:-10,0,-10 0/0:8.30872e-06:73:66:2438:6:205:-5.13392,0,-10 0/0:99:30:30:1118:0:0:0,-9.0309,-10 0/0:99:95:95:3480:0:0:0,-10,-10 0/0:99:49:49:1769:0:0:0,-10,-10 0/0:99:59:59:2105:0:0:0,-10,-10 0/0:99:75:75:2687:0:0:0,-10,-10 0/0:99:37:37:1293:0:0:0,-10,-10 0/0:99:26:26:963:0:0:0,-7.82678,-10 0/0:99:54:54:1967:0:0:0,-10,-10 0/0:99:46:46:1587:0:0:0,-10,-10 0/0:99:84:84:3080:0:0:0,-10,-10 0/0:99:84:84:2953:0:0:0,-10,-10 0/0:99:43:42:1517:0:0:0,-10,-10 0/0:99:36:36:1278:0:0:0,-10,-10 0/0:99:31:31:1128:0:0:0,-9.33193,-10 0/0:99:41:41:1510:0:0:0,-10,-10 0/0:99:90:90:3240:0:0:0,-10,-10 0/0:99:67:67:2350:0:0:0,-10,-10 0/0:7.86684e-10:63:58:2015:4:152:-0.946654,0,-10 0/0:99:18:18:664:0:0:0,-5.41854,-10 0/0:99:75:75:2731:0:0:0,-10,-10 0/0:99:57:57:2069:0:0:0,-10,-10 0/0:99:29:29:1052:0:0:0,-8.72987,-10 0/0:99:61:61:2227:0:0:0,-10,-10 0/0:99:98:98:3508:0:0:0,-10,-10 0/0:99:24:24:820:0:0:0,-7.22472,-10 0/0:99:86:85:3014:0:0:0,-10,-10 0/0:99:50:50:1712:0:0:0,-10,-10 0/0:99:23:23:792:0:0:0,-6.92369,-10 0/0:99:49:49:1690:0:0:0,-10,-10 0/0:99:72:72:2619:0:0:0,-10,-10 0/0:99:42:42:1539:0:0:0,-10,-10 0/0:99:103:103:3658:0:0:0,-10,-10 0/0:99:93:93:3333:0:0:0,-10,-10 0/0:99:45:45:1601:0:0:0,-10,-10 0/0:99:112:112:3995:0:0:0,-10,-10 0/0:99:75:74:2706:0:0:0,-10,-10 0/0:99:61:61:2170:0:0:0,-10,-10 0/0:99:57:56:2101:1:15:0,-10,-10 0/0:99:81:81:2899:0:0:0,-10,-10 0/0:99:22:22:798:0:0:0,-6.62266,-10 0/0:99:62:62:2231:0:0:0,-10,-10 0/0:99:89:87:3138:1:15:0,-10,-10 0/0:99:57:57:2077:0:0:0,-10,-10 0/0:99:34:34:1209:0:0:0,-10,-10 0/0:99:38:38:1355:0:0:0,-10,-10 0/0:99:38:38:1376:0:0:0,-10,-10 0/0:99:17:17:575:0:0:0,-5.11751,-10 0/0:99:80:80:2902:0:0:0,-10,-10 0/0:99:45:45:1624:0:0:0,-10,-10 0/0:99:8:8:301:0:0:0,-2.40824,-10 0/0:99:31:31:1125:0:0:0,-9.33193,-10 0/0:99:45:45:1674:0:0:0,-10,-10 0/0:99:67:67:2437:0:0:0,-10,-10 scaffold_2706 867 . G T 449.07 . AB=0.176724;ABP=213.606;AC=9;AF=0.048913;AN=184;AO=93;CIGAR=1X;DP=1896;DPB=1896;DPRA=1.40168;EPP=204.957;EPPR=3916;GTI=17;LEN=1;MEANALT=1.02041;MQM=22.172;MQMR=35.1321;NS=92;NUMALT=1;ODDS=1.88819;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3367;QR=65529;RO=1802;RPP=204.957;RPPR=3916;RUN=1;SAF=93;SAP=204.957;SAR=0;SRF=1802;SRP=3916;SRR=0;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:25:25:921:0:0:0,-7.52575,-10 0/0:58.4781:5:5:190:0:0:0,-1.50515,-10 0/0:61.4884:6:6:216:0:0:0,-1.80618,-10 0/0:99:26:26:931:0:0:0,-7.82678,-10 0/1:13.3779:9:7:261:2:76:-6.06703,0,-10 0/0:82.56:13:13:478:0:0:0,-3.91339,-10 0/0:63.345:34:32:1190:2:69:0,-0.931057,-10 0/0:0.00257077:21:19:670:2:65:-2.17559,0,-10 0/0:66.1329:23:21:758:1:38:0,-1.74524,-10 0/0:55.4678:4:4:139:0:0:0,-1.20412,-10 0/0:70.5193:9:9:328:0:0:0,-2.70927,-10 0/0:55.4678:4:4:135:0:0:0,-1.20412,-10 0/0:76.5398:11:11:391:0:0:0,-3.31133,-10 0/0:0.00579147:20:18:652:2:66:-2.52815,0,-10 0/0:94.5936:17:17:610:0:0:0,-5.11751,-10 0/0:73.5296:10:10:378:0:0:0,-3.0103,-10 0/0:85.5698:14:14:521:0:0:0,-4.21442,-10 0/0:0.0036275:10:9:320:1:38:-1.7897,0,-10 0/0:0.000589262:13:12:451:1:38:-1.00055,0,-10 0/0:94.8268:33:32:1187:1:38:0,-4.61548,-10 0/0:0.0173127:20:18:623:2:71:-3.00315,0,-10 0/0:71.9586:25:24:881:1:38:0,-2.32781,-10 0/0:73.5296:10:10:378:0:0:0,-3.0103,-10 0/0:56.0888:19:18:677:1:37:0,-0.740816,-10 0/0:1.31136e-05:48:45:1634:3:114:-0.428506,0,-10 0/0:82.6742:21:20:734:1:16:0,-3.39941,-10 0/0:86.2172:30:29:1037:1:38:0,-3.75378,-10 0/0:99:28:28:975:0:0:0,-8.42884,-10 0/0:86.2172:30:29:1039:1:38:0,-3.75378,-10 0/0:91.5874:16:16:560:0:0:0,-4.81648,-10 0/0:73.5296:10:10:360:0:0:0,-3.0103,-10 0/0:99:23:23:867:0:0:0,-6.92369,-10 0/0:99:35:35:1272:0:0:0,-10,-10 0/0:88.5791:15:15:554:0:0:0,-4.51545,-10 0/0:57.8763:20:19:708:1:38:0,-0.91957,-10 0/0:0.0116187:8:7:242:1:38:-2.29485,0,-10 0/0:99:27:27:980:0:0:0,-8.12781,-10 0/0:0.0518909:20:18:671:2:76:-3.47815,0,-10 0/0:74.7986:26:25:889:1:38:0,-2.61181,-10 0/0:79.5503:12:12:443:0:0:0,-3.61236,-10 0/0:91.9543:32:31:1113:1:38:0,-4.32781,-10 0/0:65.9307:37:35:1289:2:75:0,-1.18964,-10 0/0:99:24:24:840:0:0:0,-7.22472,-10 0/0:99:38:38:1390:0:0:0,-10,-10 0/0:67.3002:23:22:792:1:37:0,-1.86196,-10 0/0:73.5296:10:10:372:0:0:0,-3.0103,-10 0/0:99:22:22:793:0:0:0,-6.62266,-10 0/0:0.555284:16:14:520:2:76:-4.4827,0,-10 0/0:99:20:20:712:0:0:0,-6.0206,-10 0/0:99:38:37:1356:1:38:0,-6.05936,-10 0/0:97.5958:18:18:654:0:0:0,-5.41854,-10 0/0:99:24:24:889:0:0:0,-7.22472,-10 0/1:23.5624:20:17:591:3:114:-7.6763,0,-10 0/0:56.3133:18:17:620:1:34:0,-0.763267,-10 0/0:99:30:29:1068:1:16:0,-5.95378,-10 0/0:7.44627e-05:30:28:1012:2:74:-0.637589,0,-10 0/1:49.9865:23:19:677:4:150:-10,0,-10 0/0:0.00288117:10:9:339:1:37:-1.6897,0,-10 0/0:99:21:21:777:0:0:0,-6.32163,-10 0/0:76.5398:11:11:384:0:0:0,-3.31133,-10 0/0:86.2172:30:29:1037:1:38:0,-3.75378,-10 0/0:79.6448:27:26:965:1:36:0,-3.09645,-10 0/0:99:19:19:708:0:0:0,-5.71957,-10 0/0:55.0888:19:18:644:1:38:0,-0.640816,-10 0/0:99:21:21:770:0:0:0,-6.32163,-10 0/0:77.6449:27:26:965:1:38:0,-2.89645,-10 0/0:0.00288117:10:9:335:1:37:-1.6897,0,-10 0/0:99:31:31:1064:0:0:0,-9.33193,-10 0/0:75.7985:26:25:909:1:37:0,-2.71181,-10 0/0:94.5936:17:17:621:0:0:0,-5.11751,-10 0/1:85.7683:34:28:1053:6:215:-10,0,-10 0/1:60.3714:34:29:1083:5:188:-10,0,-10 0/1:37.8984:20:16:594:4:130:-9.68969,0,-10 0/1:99:48:39:1412:9:340:-10,0,-10 0/1:62.6908:33:28:1052:5:188:-10,0,-10 0/0:6.97878e-05:23:21:718:2:54:-0.609431,0,-10 0/0:63.483:22:21:761:1:38:0,-1.48024,-10 0/0:6.16413e-05:31:29:1046:2:76:-0.555523,0,-10 0/0:67.509:8:8:298:0:0:0,-2.40824,-10 0/0:85.5698:14:14:498:0:0:0,-4.21442,-10 0/0:99:32:31:1123:1:29:0,-5.22781,-10 0/0:99:26:26:962:0:0:0,-7.82678,-10 0/0:97.5958:18:18:650:0:0:0,-5.41854,-10 0/0:0.000200191:14:13:452:1:36:-0.531708,0,-10 0/0:88.5791:15:15:559:0:0:0,-4.51545,-10 0/0:0.000589262:13:12:434:1:38:-1.00055,0,-10 0/0:97.5958:18:18:662:0:0:0,-5.41854,-10 0/0:91.5874:16:16:585:0:0:0,-4.81648,-10 0/0:0.0584067:5:4:143:1:38:-2.99382,0,-10 0/0:70.5193:9:9:316:0:0:0,-2.70927,-10 0/1:42.2609:11:8:295:3:114:-9.54615,0,-10 0/0:73.5296:10:10:376:0:0:0,-3.0103,-10 scaffold_2706 888 . C T 45.3439 . AB=0.135678;ABP=232.433;AC=9;AF=0.048913;AN=184;AO=78;CIGAR=1X;DP=1896;DPB=1896;DPRA=1.36097;EPP=172.385;EPPR=3872.96;GTI=16;LEN=1;MEANALT=1;MQM=46.3718;MQMR=33.9791;NS=92;NUMALT=1;ODDS=10.4408;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=2902;QR=66873;RO=1818;RPP=172.385;RPPR=3872.96;RUN=1;SAF=78;SAP=172.385;SAR=0;SRF=1818;SRP=3950.75;SRR=0;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:25:24:893:1:38:0,-2.32781,-10 0/0:99:5:5:190:0:0:0,-1.50515,-10 0/0:99:6:6:218:0:0:0,-1.80618,-10 0/0:99:26:26:977:0:0:0,-7.82678,-10 0/0:99:9:9:332:0:0:0,-2.70927,-10 0/0:99:13:13:470:0:0:0,-3.91339,-10 0/0:99:34:33:1213:1:38:0,-4.90354,-10 0/0:99:21:20:704:1:38:0,-1.19941,-10 0/0:99:23:22:814:1:38:0,-1.76196,-10 0/0:99:4:4:147:0:0:0,-1.20412,-10 0/0:99:9:9:289:0:0:0,-2.70927,-10 0/0:99:4:4:147:0:0:0,-1.20412,-10 0/0:99:11:10:374:1:38:-1.53006,0,-10 0/0:99:20:20:741:0:0:0,-6.0206,-10 0/0:99:17:16:530:1:38:0,-0.087061,-10 0/0:99:10:10:373:0:0:0,-3.0103,-10 0/0:99:14:14:525:0:0:0,-4.21442,-10 0/0:99:10:9:320:1:38:-1.7897,0,-10 0/0:99:13:13:490:0:0:0,-3.91339,-10 0/0:99:33:32:1187:1:38:0,-4.61548,-10 0/1:45.3439:20:18:651:2:76:-3.47815,0,-10 0/0:99:25:24:855:1:38:0,-2.32781,-10 0/0:99:10:10:380:0:0:0,-3.0103,-10 0/1:45.3439:19:17:643:2:76:-3.73343,0,-10 0/0:99:48:46:1741:2:76:0,-4.17713,-10 0/0:99:21:19:698:2:75:-3.12559,0,-10 0/1:45.3439:30:25:912:5:190:-10,0,-10 0/0:99:28:28:992:0:0:0,-8.42884,-10 0/0:99:30:30:1088:0:0:0,-9.0309,-10 0/1:45.3439:16:13:464:3:114:-8.57171,0,-10 0/0:99:10:10:378:0:0:0,-3.0103,-10 0/0:99:23:23:861:0:0:0,-6.92369,-10 0/0:99:35:33:1235:2:75:0,-0.636533,-10 0/0:99:15:14:510:1:34:-0.0606413,0,-10 0/0:99:20:20:758:0:0:0,-6.0206,-10 0/0:99:8:8:303:0:0:0,-2.40824,-10 0/0:99:27:26:976:1:38:0,-2.89645,-10 0/1:45.3439:20:18:678:2:76:-3.47815,0,-10 0/0:99:26:24:869:2:76:-1.9051,0,-10 0/0:99:12:11:408:1:38:-1.26682,0,-10 0/0:99:32:32:1133:0:0:0,-9.63296,-10 0/0:99:37:34:1257:3:114:-3.39231,0,-10 0/0:99:24:22:812:2:76:-2.43619,0,-10 0/0:99:38:35:1312:3:110:-2.75366,0,-10 0/0:99:23:21:748:2:76:-2.69943,0,-10 0/0:99:10:10:377:0:0:0,-3.0103,-10 0/0:99:22:20:740:2:54:-0.870952,0,-10 0/0:99:16:15:566:1:37:-0.0876401,0,-10 0/0:99:20:19:711:1:37:0,-1.01957,-10 0/0:99:38:36:1335:2:75:0,-1.46718,-10 0/0:99:18:17:606:1:16:0,-2.56327,-10 0/0:99:24:23:872:1:38:0,-2.04451,-10 0/1:45.3439:20:15:523:5:190:-10,0,-10 0/0:99:18:18:676:0:0:0,-5.41854,-10 0/0:99:30:30:1108:0:0:0,-9.0309,-10 0/0:99:30:30:1103:0:0:0,-9.0309,-10 0/0:99:23:23:843:0:0:0,-6.92369,-10 0/0:99:10:9:341:1:38:-1.7897,0,-10 0/0:99:21:20:753:1:38:0,-1.19941,-10 0/0:99:11:11:413:0:0:0,-3.31133,-10 0/1:45.3439:30:27:1007:3:112:-5.03096,0,-10 0/0:99:27:27:1013:0:0:0,-8.12781,-10 0/0:99:19:19:677:0:0:0,-5.71957,-10 0/0:99:19:19:678:0:0:0,-5.71957,-10 0/0:99:21:21:791:0:0:0,-6.32163,-10 0/0:99:27:26:972:1:38:0,-2.89645,-10 0/0:99:10:10:374:0:0:0,-3.0103,-10 0/0:99:31:30:1110:1:38:0,-4.04057,-10 0/0:99:26:26:946:0:0:0,-7.82678,-10 0/0:99:17:17:633:0:0:0,-5.11751,-10 0/0:99:34:34:1276:0:0:0,-10,-10 0/0:99:34:32:1165:2:76:0,-0.266057,-10 0/0:99:20:19:698:1:38:0,-0.91957,-10 0/0:99:48:48:1734:0:0:0,-10,-10 0/0:99:33:32:1156:1:38:0,-4.61548,-10 0/0:99:23:23:811:0:0:0,-6.92369,-10 0/0:99:22:22:802:0:0:0,-6.62266,-10 0/0:99:31:30:1082:1:38:0,-4.04057,-10 0/0:99:8:8:297:0:0:0,-2.40824,-10 0/0:99:14:14:510:0:0:0,-4.21442,-10 0/0:99:32:31:1122:1:38:0,-4.32781,-10 0/1:45.3439:26:23:859:3:113:-6.13486,0,-10 0/1:45.3439:18:16:602:2:76:-3.98615,0,-10 0/0:99:14:13:485:1:38:-0.731708,0,-10 0/0:99:15:15:559:0:0:0,-4.51545,-10 0/0:99:13:12:433:1:38:-1.00055,0,-10 0/0:99:18:18:665:0:0:0,-5.41854,-10 0/0:99:16:16:575:0:0:0,-4.81648,-10 0/0:99:5:4:151:1:36:-2.79382,0,-10 0/0:99:9:9:341:0:0:0,-2.70927,-10 0/0:99:11:11:416:0:0:0,-3.31133,-10 0/0:99:10:10:370:0:0:0,-3.0103,-10 scaffold_2706 896 . G C 134.993 . AB=0.18018;ABP=101.626;AC=6;AF=0.0326087;AN=184;AO=90;CIGAR=1X;DP=1896;DPB=1896;DPRA=1.34005;EPP=198.443;EPPR=3800.92;GTI=23;LEN=1;MEANALT=1.51724;MQM=29.6667;MQMR=35.0663;NS=92;NUMALT=1;ODDS=0.266533;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3257;QR=63538;RO=1749;RPP=198.443;RPPR=3800.92;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=1749;SRP=3800.92;SRR=0;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:78.2856:25:23:813:1:38:0,-2.41951,-10 0/0:65.1716:5:5:183:0:0:0,-1.50515,-10 0/0:68.1819:6:6:215:0:0:0,-1.80618,-10 0/0:99:26:26:937:0:0:0,-7.82678,-10 0/0:74.2024:9:8:304:0:0:0,-2.40824,-10 0/0:89.2519:13:13:479:0:0:0,-3.91339,-10 0/0:60.9213:34:32:1187:2:76:0,-0.266057,-10 0/0:99:21:20:713:0:0:0,-6.0206,-10 0/0:99:23:22:763:0:0:0,-6.62266,-10 0/0:62.1613:4:4:138:0:0:0,-1.20412,-10 0/0:77.2127:9:9:325:0:0:0,-2.70927,-10 0/0:0.0267916:4:3:103:1:38:-3.19794,0,-9.01127 0/0:83.2329:11:11:403:0:0:0,-3.31133,-10 0/0:0.029809:20:16:583:2:76:-3.66115,0,-10 0/0:65.9612:17:16:526:1:27:0,-1.18706,-10 0/1:3.86721:10:7:260:2:76:-5.68703,0,-10 0/0:9.12921e-05:14:13:493:1:38:-0.731708,0,-10 0/0:0.000782947:10:8:304:1:38:-1.66497,0,-10 0/0:0.000169544:13:12:453:1:38:-1.00055,0,-10 0/0:99:33:30:1120:0:0:0,-9.0309,-10 0/0:99:20:20:726:0:0:0,-6.0206,-10 0/0:97.9197:25:22:816:1:14:0,-4.38196,-10 0/0:80.2228:10:10:374:0:0:0,-3.0103,-10 0/0:60.4988:19:18:645:1:38:0,-0.640816,-10 0/0:99:48:45:1671:1:38:0,-8.76462,-10 0/0:66.0848:21:20:710:1:38:0,-1.19941,-10 0/0:99:30:29:1039:0:0:0,-8.72987,-10 0/0:99:28:25:891:0:0:0,-7.52575,-10 0/0:92.624:30:29:1029:1:37:0,-3.85378,-10 0/0:98.2686:16:16:551:0:0:0,-4.81648,-10 0/0:0.000415376:10:9:330:1:34:-1.3897,0,-10 0/0:99:23:21:793:0:0:0,-6.32163,-10 0/0:99:35:35:1283:0:0:0,-10,-10 0/0:95.2664:15:15:560:0:0:0,-4.51545,-10 0/0:63.2863:20:19:712:1:38:0,-0.91957,-10 0/0:0.00333993:8:7:266:1:38:-2.29485,0,-10 0/0:0.000325907:27:23:853:2:75:-1.70137,0,-10 0/0:64.2488:20:18:642:1:38:0,-1.01582,-10 0/0:81.1689:26:24:883:1:38:0,-2.70781,-10 0/0:86.2427:12:12:420:0:0:0,-3.61236,-10 0/0:97.1837:32:30:1067:1:38:0,-4.31057,-10 0/0:73.9571:37:35:1301:2:71:0,-1.56964,-10 0/0:74.5357:24:23:846:1:38:0,-2.04451,-10 0/0:99:38:37:1336:1:38:0,-6.05936,-10 0/0:0.00324563:23:21:729:2:76:-2.69943,0,-10 0/0:0.00104345:10:9:338:1:38:-1.7897,0,-10 0/0:0.00592864:22:20:721:2:76:-2.96095,0,-10 0/0:2.03874e-05:16:14:517:1:38:-0.0806413,0,-10 0/0:99:20:20:709:0:0:0,-6.0206,-10 0/0:73.0071:38:35:1257:2:76:0,-1.47464,-10 0/0:57.6112:18:16:548:1:38:0,-0.352061,-10 0/0:75.5102:24:22:827:1:38:0,-2.14196,-10 0/0:99:20:20:751:0:0:0,-6.0206,-10 0/0:0.000329515:18:16:603:2:52:-1.70615,0,-10 0/0:63.1658:30:25:867:2:57:0,-0.490503,-10 0/0:2.73546e-05:30:27:972:2:75:-0.625323,0,-10 0/0:71.7102:23:22:788:1:38:0,-1.76196,-10 0/0:80.2228:10:10:375:0:0:0,-3.0103,-10 0/1:52.8575:21:17:622:4:152:-10,0,-10 0/0:83.2329:11:11:393:0:0:0,-3.31133,-10 0/0:86.8539:30:26:904:1:38:0,-3.27645,-10 0/0:0.000403272:27:23:802:2:76:-1.79387,0,-10 0/1:20.3614:19:16:581:3:113:-7.81342,0,-10 0/0:63.4988:19:18:632:1:35:0,-0.940816,-10 0/0:75.9862:21:19:717:1:28:0,-2.18957,-10 0/0:99:27:27:994:0:0:0,-8.12781,-10 0/0:80.2228:10:10:368:0:0:0,-3.0103,-10 0/0:99:31:30:1108:0:0:0,-9.0309,-10 0/0:80.2084:26:25:873:1:38:0,-2.61181,-10 0/0:55.9612:17:16:588:1:37:0,-0.187061,-10 0/0:61.9743:34:31:1159:2:76:0,-0.371356,-10 0/0:99:34:32:1188:1:14:0,-7.27548,-10 0/0:99:20:20:730:0:0:0,-6.0206,-10 0/0:1.9037e-05:48:42:1512:3:114:-0.903966,0,-10 0/0:99:33:33:1216:0:0:0,-9.93399,-10 0/0:71.7102:23:22:765:1:38:0,-1.76196,-10 0/0:67.0697:22:19:670:1:38:0,-1.2979,-10 0/0:2.32933e-05:31:29:1022:2:76:-0.555523,0,-10 0/0:74.2024:8:8:272:0:0:0,-2.40824,-10 0/1:61.1523:14:9:326:4:149:-10,0,-10 0/1:25.2422:32:27:984:4:151:-8.7539,0,-10 0/0:8.37795e-06:26:21:785:2:52:-0.111431,0,-10 0/0:0.0376952:18:15:552:2:75:-3.7627,0,-10 0/0:3.04983e-05:14:12:424:1:33:-0.255553,0,-10 0/1:28.294:15:11:407:3:114:-8.60668,0,-10 0/0:89.2519:13:13:492:0:0:0,-3.91339,-10 0/0:0.0632436:18:16:602:2:76:-3.98615,0,-10 0/0:2.60833e-05:16:15:556:1:38:-0.18764,0,-10 0/0:65.1716:5:5:189:0:0:0,-1.50515,-10 0/0:77.2127:9:9:340:0:0:0,-2.70927,-10 0/0:83.2329:11:11:413:0:0:0,-3.31133,-10 0/0:0.000782947:10:8:304:1:38:-1.66497,0,-10 scaffold_2706 913 . G A 55.7008 . AB=0.16092;ABP=176.778;AC=10;AF=0.0543478;AN=184;AO=90;CIGAR=1X;DP=1890;DPB=1890;DPRA=1.33643;EPP=198.443;EPPR=3911.66;GTI=18;LEN=1;MEANALT=1;MQM=29.6111;MQMR=34.7656;NS=92;NUMALT=1;ODDS=12.8256;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=0;PRO=0;QA=3258;QR=65198;RO=1800;RPP=198.443;RPPR=3911.66;RUN=1;SAF=90;SAP=198.443;SAR=0;SRF=1800;SRP=3911.66;SRR=0;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 0/0:99:25:24:876:1:38:0,-2.32781,-10 0/0:99:5:5:183:0:0:0,-1.50515,-10 0/0:99:6:6:205:0:0:0,-1.80618,-10 0/0:99:26:26:930:0:0:0,-7.82678,-10 0/0:99:9:9:338:0:0:0,-2.70927,-10 0/0:99:13:13:470:0:0:0,-3.91339,-10 0/0:99:34:32:1178:2:76:0,-0.266057,-10 0/0:99:20:20:711:0:0:0,-6.0206,-10 0/0:99:23:23:833:0:0:0,-6.92369,-10 0/0:99:4:4:129:0:0:0,-1.20412,-10 0/0:99:9:9:289:0:0:0,-2.70927,-10 0/1:55.7008:4:3:100:1:38:-3.19794,0,-8.73127 0/0:99:11:11:392:0:0:0,-3.31133,-10 0/0:99:20:18:648:2:76:-3.47815,0,-10 0/0:99:17:16:538:1:15:0,-2.38706,-10 0/1:55.7008:10:8:299:2:74:-5.67291,0,-10 0/0:99:14:13:483:1:38:-0.731708,0,-10 0/0:99:10:9:337:1:15:0,-0.5103,-10 0/0:99:13:12:439:1:38:-1.00055,0,-10 0/0:99:33:33:1172:0:0:0,-9.93399,-10 0/0:99:20:20:721:0:0:0,-6.0206,-10 0/0:99:25:24:899:1:37:0,-2.42781,-10 0/0:99:10:10:377:0:0:0,-3.0103,-10 0/0:99:19:18:667:1:38:0,-0.640816,-10 0/0:99:48:47:1732:1:38:0,-8.9682,-10 0/0:99:21:20:698:1:38:0,-1.19941,-10 0/0:99:29:29:1045:0:0:0,-8.72987,-10 0/0:99:28:28:950:0:0:0,-8.42884,-10 0/0:99:30:29:1018:1:38:0,-3.75378,-10 0/0:99:16:16:555:0:0:0,-4.81648,-10 0/0:99:10:9:338:1:36:-1.5897,0,-10 0/0:99:23:23:868:0:0:0,-6.92369,-10 0/0:99:35:35:1296:0:0:0,-10,-10 0/0:99:15:15:538:0:0:0,-4.51545,-10 0/0:99:20:19:714:1:38:0,-0.91957,-10 0/0:99:8:7:263:1:38:-2.29485,0,-10 0/0:99:27:25:920:2:76:-1.6375,0,-10 0/0:99:20:19:684:1:38:0,-0.91957,-10 0/0:99:26:25:927:1:38:0,-2.61181,-10 0/0:99:12:12:415:0:0:0,-3.61236,-10 0/0:99:32:31:1084:1:38:0,-4.32781,-10 0/0:99:37:35:1320:2:76:0,-1.09464,-10 0/0:99:24:23:833:1:38:0,-2.04451,-10 0/0:99:38:37:1389:1:38:0,-6.05936,-10 0/1:55.7008:23:20:720:3:90:-4.72453,0,-10 0/0:99:10:9:314:1:38:-1.7897,0,-10 0/0:99:22:20:725:2:76:-2.96095,0,-10 0/0:99:16:15:562:1:38:-0.18764,0,-10 0/0:99:20:20:735:0:0:0,-6.0206,-10 0/0:99:38:36:1290:2:76:0,-1.37218,-10 0/0:99:18:17:599:1:38:0,-0.363267,-10 0/0:99:24:23:861:1:38:0,-2.04451,-10 0/0:99:20:20:697:0:0:0,-6.0206,-10 0/0:99:18:16:600:2:53:-1.80115,0,-10 0/0:99:29:27:946:2:51:0,-1.27634,-10 0/0:99:30:28:1023:2:76:-0.827589,0,-10 0/0:99:23:22:819:1:38:0,-1.76196,-10 0/0:99:10:10:376:0:0:0,-3.0103,-10 0/1:55.7008:21:17:607:4:147:-10,0,-10 0/0:99:11:11:387:0:0:0,-3.31133,-10 0/0:99:30:29:1028:1:38:0,-3.75378,-10 0/0:99:27:25:901:2:76:-1.6375,0,-10 0/1:55.7008:19:16:588:3:114:-7.90675,0,-10 0/0:99:19:18:617:1:33:0,-1.14082,-10 0/0:99:21:20:732:1:28:0,-2.19941,-10 0/0:99:26:26:947:0:0:0,-7.82678,-10 0/0:99:10:10:365:0:0:0,-3.0103,-10 0/0:99:30:30:1084:0:0:0,-9.0309,-10 0/0:99:26:25:896:1:38:0,-2.61181,-10 0/0:99:17:16:553:1:38:0,-0.087061,-10 0/0:99:34:32:1195:2:76:0,-0.266057,-10 0/0:99:34:33:1213:1:38:0,-4.90354,-10 0/0:99:20:20:706:0:0:0,-6.0206,-10 0/0:99:48:45:1626:3:111:-0.148506,0,-10 0/0:99:33:33:1221:0:0:0,-9.93399,-10 0/0:99:22:22:792:0:0:0,-6.62266,-10 0/0:99:22:21:767:1:38:0,-1.48024,-10 0/0:99:31:29:1058:2:76:-0.555523,0,-10 0/0:99:8:8:296:0:0:0,-2.40824,-10 0/1:55.7008:14:10:354:4:147:-10,0,-10 0/1:55.7008:32:28:1008:4:144:-8.24286,0,-10 0/0:99:26:24:890:2:76:-1.9051,0,-10 0/1:55.7008:18:16:576:2:76:-3.98615,0,-10 0/0:99:14:13:435:1:38:-0.731708,0,-10 0/1:55.7008:15:12:444:3:111:-8.50256,0,-10 0/0:99:13:13:471:0:0:0,-3.91339,-10 0/1:55.7008:18:16:569:2:76:-3.98615,0,-10 0/0:99:16:15:529:1:38:-0.18764,0,-10 0/0:99:5:5:181:0:0:0,-1.50515,-10 0/0:99:9:9:341:0:0:0,-2.70927,-10 0/0:99:11:11:417:0:0:0,-3.31133,-10 0/0:99:10:9:336:1:38:-1.7897,0,-10 scaffold_2706 925 . G A 34373.4 . AB=0.63328;ABP=294.161;AC=92;AF=0.5;AN=184;AO=1195;CIGAR=1X2M1X;DP=1887;DPB=1887.75;DPRA=0;EPP=2597.92;EPPR=313.531;GTI=5;LEN=1;MEANALT=2.16304;MQM=41.0895;MQMR=21.1888;NS=92;NUMALT=2;ODDS=0.104838;PAIRED=0;PAIREDR=0;PAO=0;PQA=0;PQR=18.5;PRO=0.5;QA=43579;QR=5289;RO=143;RPP=2597.92;RPPR=313.531;RUN=1;SAF=1195;SAP=2597.92;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1|0:99:25:0:0:18,6:647,216:-10,-10,-10,-10,0,-10 1|0:73.5344:5:0:0:4,1:152,38:-10,-4.19794,-2.99382,-10,0,-10 0|1:14.4926:6:2:75:3,1:112,34:-9.59985,0,-6.26818,-6.97415,-3.82191,-10 1|0:99:26:0:0:16,10:573,379:-10,-10,-10,-10,0,-10 0|1:42.4475:9:3:111:5,1:190,38:-10,0,-9.32245,-10,-6.92798,-10 1|0:99:13:0:0:9,4:342,145:-10,-10,-10,-10,0,-10 1|0:99:34:3:108:25,6:931,228:-10,-10,-10,-10,0,-10 1|0:58.9311:20:5:188:7,8:262,257:-10,-6.16198,-10,-6.7552,0,-10 1|0:0.00444757:23:2:76:19,2:694,76:-10,0,-2.84059,-10,0,-10 1|0:-0:4:0:0:4,0:132,0:-10,-1.20412,0,-10,-1.20412,-10 1|0:90.0666:9:1:38:5,3:185,112:-10,-7.02131,-9.41495,-10,0,-10 1|0:89.7999:4:0:0:2,2:72,67:-10,-6.54109,-5.93903,-7.01609,0,-6.41403 1|0:76.9586:11:0:0:10,1:369,38:-10,-4.54036,-1.53006,-10,0,-10 1|0:99:20:1:38:10,9:367,316:-10,-10,-10,-10,0,-10 1|0:99:17:0:0:9,8:299,300:-10,-10,-10,-10,0,-10 1|0:53.3148:10:3:113:3,4:113,152:-10,-3.45534,-10,0,0,-9.60686 1|0:99:14:0:0:11,3:411,110:-10,-10,-8.61335,-10,0,-10 1|0:99:10:2:76:2,6:76,218:-10,-10,-10,0,0,-5.87892 1|0:56.781:13:2:76:8,3:299,111:-10,-3.40324,-8.89015,-10,0,-10 1|0:99:33:0:0:22,11:798,418:-10,-10,-10,-10,0,-10 1|0:92.0471:20:2:76:14,4:471,152:-10,-7.64448,-10,-10,0,-10 1|0:80.3582:25:2:76:19,4:718,137:-10,-6.47541,-9.3285,-10,0,-10 1|0:0.00857687:10:2:75:6,2:225,72:-10,0,-5.79642,-10,-0.285,-10 1|0:99:19:1:38:10,8:373,303:-10,-10,-10,-10,0,-10 1|0:99:48:5:189:29,14:1064,520:-10,-10,-10,-10,0,-10 1|0:99:21:1:35:14,6:505,228:-10,-10,-10,-10,0,-10 1|0:99:29:1:37:19,8:685,304:-10,-10,-10,-10,0,-10 1|0:99:28:2:67:19,7:698,266:-10,-10,-10,-10,0,-10 1|0:28.6782:30:3:111:23,3:852,114:-10,-0.2775,-5.85569,-10,0,-10 1|0:99:16:1:37:11,4:402,139:-10,-10,-10,-10,0,-10 1|0:99:10:0:0:7,3:260,113:-10,-10,-9.61555,-10,0,-10 1|0:99:23:0:0:16,7:599,266:-10,-10,-10,-10,0,-10 1|0:99:35:1:36:27,7:1009,263:-10,-10,-10,-10,0,-10 1|0:88.1973:15:2:76:9,4:338,151:-10,-7.25938,-10,-10,0,-10 1|0:99:20:2:76:13,5:484,190:-10,-10,-10,-10,0,-10 1|0:64.0851:8:1:37:4,2:149,76:-10,-3.70776,-6.23741,-9.90488,0,-10 1|0:99:26:0:0:20,5:740,190:-10,-10,-10,-10,0,-10 1|0:99:20:2:76:13,5:477,189:-10,-10,-10,-10,0,-10 1|0:99:26:4:151:11,11:412,416:-10,-10,-10,-10,0,-10 1|0:99:12:0:0:9,3:318,112:-10,-10,-9.1834,-10,0,-10 1|0:99:32:2:76:23,7:808,265:-10,-10,-10,-10,0,-10 1|0:99:37:2:76:20,15:728,567:-10,-10,-10,-10,0,-10 1|0:99:24:0:0:18,4:649,152:-10,-10,-10,-10,0,-10 1|0:99:38:0:0:31,7:1088,261:-10,-10,-10,-10,0,-10 1|0:99:23:2:76:13,8:424,281:-10,-10,-10,-10,0,-10 1|0:99:10:0:0:6,4:228,129:-10,-10,-10,-10,0,-10 1|0:99:22:0:0:16,6:584,218:-10,-10,-10,-10,0,-10 1|0:87.6451:16:3:105:8,5:302,186:-10,-7.60203,-10,-10,0,-10 1|0:99:20:0:0:18,2:646,76:-10,-8.89669,-3.47815,-10,0,-10 1|0:99:38:4:149:21,13:756,466:-10,-10,-10,-10,0,-10 1|0:99:18:1:38:13,4:444,149:-10,-10,-10,-10,0,-10 1|0:99:24:2:76:15,7:563,262:-10,-10,-10,-10,0,-10 1|0:99:20:1:38:13,6:475,228:-10,-10,-10,-10,0,-10 1|0:99:18:2:75:9,7:335,241:-10,-10,-10,-10,0,-10 1|0:99:29:1:38:20,8:747,270:-10,-10,-10,-10,0,-10 1|0:99:30:1:28:21,8:758,304:-10,-10,-10,-10,0,-10 1|0:99:23:4:151:11,8:405,304:-10,-10,-10,-10,0,-10 1|0:0.0016644:10:1:37:8,1:298,37:-10,0,-1.57497,-10,0,-10 1|0:99:21:1:37:11,9:389,331:-10,-10,-10,-10,0,-10 1|0:99:11:0:0:9,2:316,76:-10,-8.3583,-5.64903,-10,0,-10 1|0:99:30:2:75:20,8:695,304:-10,-10,-10,-10,0,-10 1|0:99:27:1:29:15,10:559,375:-10,-10,-10,-10,0,-10 1|0:99:19:0:0:10,9:372,335:-10,-10,-10,-10,0,-10 1|0:99:19:0:0:16,3:580,84:-10,-9.92323,-5.10675,-10,0,-10 1|0:99:20:2:76:10,8:365,267:-10,-10,-10,-10,0,-10 1|0:99:26:4:146:15,7:523,266:-10,-10,-10,-10,0,-10 0|1:13.9953:10:2:76:7,1:248,38:-10,0,-5.68703,-10,-3.77218,-10 1|0:99:30:0:0:24,6:856,226:-10,-10,-10,-10,0,-10 1|0:99:26:3:111:12,10:431,368:-10,-10,-10,-10,0,-10 1|0:99:17:1:38:12,4:445,152:-10,-10,-10,-10,0,-10 1|0:99:34:4:147:13,15:493,569:-10,-10,-10,-10,0,-10 1|0:99:34:6:203:17,10:633,374:-10,-10,-10,-10,0,-10 0|1:75.1724:20:3:113:16,1:605,15:-10,0,-7.60675,-10,-10,-10 1|0:99:48:6:224:25,14:881,517:-10,-10,-10,-10,0,-10 1|0:99:33:6:222:14,10:499,378:-10,-10,-10,-10,0,-10 1|0:0.368285:22:2:73:18,2:671,53:-10,0,-2.87815,-10,-1.9,-10 1|0:99:22:3:113:11,7:408,239:-10,-10,-10,-10,0,-10 1|0:99:31:1:35:22,8:823,280:-10,-10,-10,-10,0,-10 1|0:99:8:0:0:5,2:177,76:-10,-7.56683,-6.06168,-10,0,-10 1|0:99:14:1:38:8,5:298,190:-10,-10,-10,-10,0,-10 1|0:99:32:1:38:20,10:727,350:-10,-10,-10,-10,0,-10 1|0:99:26:0:0:17,9:633,300:-10,-10,-10,-10,0,-10 1|0:99:18:1:38:8,9:292,300:-10,-10,-10,-10,0,-10 0|1:4.25614:14:2:75:10,2:364,53:-10,0,-5.01218,-10,-2.09,-10 1|0:99:15:1:36:9,5:329,190:-10,-10,-10,-10,0,-10 1|0:85.7553:13:2:76:7,4:242,150:-10,-7.01515,-10,-10,0,-10 1|0:99:17:2:74:9,5:328,190:-10,-10,-10,-10,0,-10 0|1:13.3638:16:2:73:13,1:488,38:-10,0,-4.06574,-10,-3.70903,-10 1|0:99:5:0:0:3,2:114,75:-10,-7.52294,-6.61985,-10,0,-10 1|0:99:9:0:0:7,2:261,76:-10,-8.17424,-6.06703,-10,0,-10 1|0:37.4988:11:2:68:7,2:266,76:-10,-0.76,-5.70703,-10,0,-10 1|0:99:10:0:0:6,4:227,152:-10,-10,-10,-10,0,-10 scaffold_2706 928 . G C 34373.4 . AB=0.279873;ABP=795.535;AC=178;AF=0.967391;AN=184;AO=527;CIGAR=3M1X;DP=1887;DPB=1887.75;DPRA=0;EPP=1147.38;EPPR=313.531;GTI=5;LEN=1;MEANALT=2.17582;MQM=23.5844;MQMR=21.1888;NS=92;NUMALT=2;ODDS=0.104838;PAIRED=0;PAIREDR=0;PAO=0.5;PQA=18.5;PQR=18.5;PRO=0.5;QA=19313;QR=5289;RO=143;RPP=1147.38;RPPR=313.531;RUN=1;SAF=527;SAP=1147.38;SAR=0;SRF=143;SRP=313.531;SRR=0;TYPE=snp GT:GQ:DP:RO:QR:AO:QA:GL 1|1:99:25:0:0:18,6:647,216:-10,-10,-10,-10,0,-10 1|1:73.5344:5:0:0:4,1:152,38:-10,-4.19794,-2.99382,-10,0,-10 0|1:14.4926:6:2:75:3,1:112,34:-9.59985,0,-6.26818,-6.97415,-3.82191,-10 1|1:99:26:0:0:16,10:573,379:-10,-10,-10,-10,0,-10 0|1:42.4475:9:3:111:5,1:190,38:-10,0,-9.32245,-10,-6.92798,-10 1|1:99:13:0:0:9,4:342,145:-10,-10,-10,-10,0,-10 1|1:99:34:3:108:25,6:931,228:-10,-10,-10,-10,0,-10 1|1:58.9311:20:5:188:7,8:262,257:-10,-6.16198,-10,-6.7552,0,-10 1|1:0.00444757:23:2:76:19,2:694,76:-10,0,-2.84059,-10,0,-10 1|1:-0:4:0:0:4,0:132,0:-10,-1.20412,0,-10,-1.20412,-10 1|1:90.0666:9:1:38:5,3:185,112:-10,-7.02131,-9.41495,-10,0,-10 1|1:89.7999:4:0:0:2,2:72,67:-10,-6.54109,-5.93903,-7.01609,0,-6.41403 1|1:76.9586:11:0:0:10,1:369,38:-10,-4.54036,-1.53006,-10,0,-10 1|1:99:20:1:38:10,9:367,316:-10,-10,-10,-10,0,-10 1|1:99:17:0:0:9,8:299,300:-10,-10,-10,-10,0,-10 1|1:53.3148:10:3:113:3,4:113,152:-10,-3.45534,-10,0,0,-9.60686 1|1:99:14:0:0:11,3:411,110:-10,-10,-8.61335,-10,0,-10 1|1:99:10:2:76:2,6:76,218:-10,-10,-10,0,0,-5.87892 1|1:56.781:13:2:76:8,3:299,111:-10,-3.40324,-8.89015,-10,0,-10 1|1:99:33:0:0:22,11:798,418:-10,-10,-10,-10,0,-10 1|1:92.0471:20:2:76:14,4:471,152:-10,-7.64448,-10,-10,0,-10 1|1:80.3582:25:2:76:19,4:718,137:-10,-6.47541,-9.3285,-10,0,-10 1|1:0.00857687:10:2:75:6,2:225,72:-10,0,-5.79642,-10,-0.285,-10 1|1:99:19:1:38:10,8:373,303:-10,-10,-10,-10,0,-10 1|1:99:48:5:189:29,14:1064,520:-10,-10,-10,-10,0,-10 1|1:99:21:1:35:14,6:505,228:-10,-10,-10,-10,0,-10 1|1:99:29:1:37:19,8:685,304:-10,-10,-10,-10,0,-10 1|1:99:28:2:67:19,7:698,266:-10,-10,-10,-10,0,-10 1|1:28.6782:30:3:111:23,3:852,114:-10,-0.2775,-5.85569,-10,0,-10 1|1:99:16:1:37:11,4:402,139:-10,-10,-10,-10,0,-10 1|1:99:10:0:0:7,3:260,113:-10,-10,-9.61555,-10,0,-10 1|1:99:23:0:0:16,7:599,266:-10,-10,-10,-10,0,-10 1|1:99:35:1:36:27,7:1009,263:-10,-10,-10,-10,0,-10 1|1:88.1973:15:2:76:9,4:338,151:-10,-7.25938,-10,-10,0,-10 1|1:99:20:2:76:13,5:484,190:-10,-10,-10,-10,0,-10 1|1:64.0851:8:1:37:4,2:149,76:-10,-3.70776,-6.23741,-9.90488,0,-10 1|1:99:26:0:0:20,5:740,190:-10,-10,-10,-10,0,-10 1|1:99:20:2:76:13,5:477,189:-10,-10,-10,-10,0,-10 1|1:99:26:4:151:11,11:412,416:-10,-10,-10,-10,0,-10 1|1:99:12:0:0:9,3:318,112:-10,-10,-9.1834,-10,0,-10 1|1:99:32:2:76:23,7:808,265:-10,-10,-10,-10,0,-10 1|1:99:37:2:76:20,15:728,567:-10,-10,-10,-10,0,-10 1|1:99:24:0:0:18,4:649,152:-10,-10,-10,-10,0,-10 1|1:99:38:0:0:31,7:1088,261:-10,-10,-10,-10,0,-10 1|1:99:23:2:76:13,8:424,281:-10,-10,-10,-10,0,-10 1|1:99:10:0:0:6,4:228,129:-10,-10,-10,-10,0,-10 1|1:99:22:0:0:16,6:584,218:-10,-10,-10,-10,0,-10 1|1:87.6451:16:3:105:8,5:302,186:-10,-7.60203,-10,-10,0,-10 1|1:99:20:0:0:18,2:646,76:-10,-8.89669,-3.47815,-10,0,-10 1|1:99:38:4:149:21,13:756,466:-10,-10,-10,-10,0,-10 1|1:99:18:1:38:13,4:444,149:-10,-10,-10,-10,0,-10 1|1:99:24:2:76:15,7:563,262:-10,-10,-10,-10,0,-10 1|1:99:20:1:38:13,6:475,228:-10,-10,-10,-10,0,-10 1|1:99:18:2:75:9,7:335,241:-10,-10,-10,-10,0,-10 1|1:99:29:1:38:20,8:747,270:-10,-10,-10,-10,0,-10 1|1:99:30:1:28:21,8:758,304:-10,-10,-10,-10,0,-10 1|1:99:23:4:151:11,8:405,304:-10,-10,-10,-10,0,-10 1|1:0.0016644:10:1:37:8,1:298,37:-10,0,-1.57497,-10,0,-10 1|1:99:21:1:37:11,9:389,331:-10,-10,-10,-10,0,-10 1|1:99:11:0:0:9,2:316,76:-10,-8.3583,-5.64903,-10,0,-10 1|1:99:30:2:75:20,8:695,304:-10,-10,-10,-10,0,-10 1|1:99:27:1:29:15,10:559,375:-10,-10,-10,-10,0,-10 1|1:99:19:0:0:10,9:372,335:-10,-10,-10,-10,0,-10 1|1:99:19:0:0:16,3:580,84:-10,-9.92323,-5.10675,-10,0,-10 1|1:99:20:2:76:10,8:365,267:-10,-10,-10,-10,0,-10 1|1:99:26:4:146:15,7:523,266:-10,-10,-10,-10,0,-10 0|1:13.9953:10:2:76:7,1:248,38:-10,0,-5.68703,-10,-3.77218,-10 1|1:99:30:0:0:24,6:856,226:-10,-10,-10,-10,0,-10 1|1:99:26:3:111:12,10:431,368:-10,-10,-10,-10,0,-10 1|1:99:17:1:38:12,4:445,152:-10,-10,-10,-10,0,-10 1|1:99:34:4:147:13,15:493,569:-10,-10,-10,-10,0,-10 1|1:99:34:6:203:17,10:633,374:-10,-10,-10,-10,0,-10 0|1:75.1724:20:3:113:16,1:605,15:-10,0,-7.60675,-10,-10,-10 1|1:99:48:6:224:25,14:881,517:-10,-10,-10,-10,0,-10 1|1:99:33:6:222:14,10:499,378:-10,-10,-10,-10,0,-10 1|1:0.368285:22:2:73:18,2:671,53:-10,0,-2.87815,-10,-1.9,-10 1|1:99:22:3:113:11,7:408,239:-10,-10,-10,-10,0,-10 1|1:99:31:1:35:22,8:823,280:-10,-10,-10,-10,0,-10 1|1:99:8:0:0:5,2:177,76:-10,-7.56683,-6.06168,-10,0,-10 1|1:99:14:1:38:8,5:298,190:-10,-10,-10,-10,0,-10 1|1:99:32:1:38:20,10:727,350:-10,-10,-10,-10,0,-10 1|1:99:26:0:0:17,9:633,300:-10,-10,-10,-10,0,-10 1|1:99:18:1:38:8,9:292,300:-10,-10,-10,-10,0,-10 0|1:4.25614:14:2:75:10,2:364,53:-10,0,-5.01218,-10,-2.09,-10 1|1:99:15:1:36:9,5:329,190:-10,-10,-10,-10,0,-10 1|1:85.7553:13:2:76:7,4:242,150:-10,-7.01515,-10,-10,0,-10 1|1:99:17:2:74:9,5:328,190:-10,-10,-10,-10,0,-10 0|1:13.3638:16:2:73:13,1:488,38:-10,0,-4.06574,-10,-3.70903,-10 1|1:99:5:0:0:3,2:114,75:-10,-7.52294,-6.61985,-10,0,-10 1|1:99:9:0:0:7,2:261,76:-10,-8.17424,-6.06703,-10,0,-10 1|1:37.4988:11:2:68:7,2:266,76:-10,-0.76,-5.70703,-10,0,-10 1|1:99:10:0:0:6,4:227,152:-10,-10,-10,-10,0,-10