This zip file contains newick format phylogenies for plant phylogenies from the study > Chamberlain, S.A., Vázquez, D., Carvalheiro, L., Elle, E., Vamosi, J. Accepted. Phylogenetic tree shape and the structure of mutualistic networks. Journal of Ecology. There are phylogenies in here used in the study, as well as many that were considered but not used in the study. Those not used are included because you may want to use them even though we didn't. See Appendix A in the Supplementary material associated with the article for details on each phylogeny. Note about file names: They start with _PL__ to denote _plant_, whereas animal phylogeny file names start with _AN__ Here's the relavant section from our Methods on plant phylogenies: > 2.1 Plants Plant phylogenies were built using Phylomatic (see http://phylodiversity.net/phylomatic; Webb & Donoghue 2004). Phylomatic is an online interface to retrieve a phylogeny based on a user-defined set of plant species taxonomic names. Branch lengths were estimated for the master plant phylogeny using the branch length adjustment algorithm (BLADJ) in the software Phylocom (Webb, Ackerly & Kembel 2008), which fixes a set of nodes in the tree to specified ages and evenly distributes the ages of the remaining nodes. We used node age estimates from Wikström et al. (2001) as incorporated in the “ages” file in the Phylocom installation. The tree file we used to run the bladj command in Phylocom is provided in multiple formats in Appendix B. See the master plant phylogeny in Appendix B and on Figshare.org (http://figshare.com/articles/Animal_and_Plant_Phylogenies/1015787). We pruned the master phylogeny for each network.