################################### Data packet for Cooper & Nunn 2013 ################################### This data packet contains 4 files: 1) Cooper&Nunn_PhylogeneticModels This contains the data needed to identify well- and poorly-sampled primate species in relation to their geographic range And also the data needed to fit models of sampling events against primate characteristics. 2) Cooper&Nunn_GeographicalModels This contains the data needed to identify well- and poorly-sampled countries in relation to their primate species richness And also the data needed to fit models of sampling events against country characteristics. 3) Cooper&Nunn_PrimateParasiteSAC This contains the data needed to plot species accumulation curves for each primate 4) Cooper&Nunn_CountryParasiteSAC This contains the data needed to plot species accumulation curves for each country ####################################################################################### All data was collated by Natalie Cooper (ncooper@tcd.ie) NOTE: The data comes from existing databases (see paper for details of data sources). Host-parasite data can be obtained from the Global Mammal Parasite Database (Nunn and Altizer 2006). Phylogeny can be obtained from the 10kTrees website (Arnold et al 2010). World maps can be obtained from the R package rworldmap (South et al 2012). Primate geographic range maps can be obtained from the IUCN website. ######################################################################################## Column headings HostCorrectedName = Name of primate host species in Wilson and Reeder 2005 taxonomy AdultBodyMass = Body mass of primate in g. Taken from PanTHERIA (Jones et al 2008) SubstrateUse = Degree of terrestriality (terrestrial: > 90% of time on ground, semi-terrestrial: < 90% but > 50% of time on ground, semi-arboreal: < 90% but > 50% of time in trees, or arboreal: > 90% of time in trees) GRArea = Geographic range size in km2 taken from IUCN mammal species range maps HumanDivergence = Time in millions of years since the primate shared a common ancestor with humans, taken from 10kTrees version 3 (Arnold et al 2010) ParasiteCorrectedName = Name of parasite, taken from Global Mammal Parasite Database (Nunn and Altizer 2006) ParasiteType = Type of parasite (arthropod, bacteria, fungus, helminth, protozoa or virus) SamplingEvents = Number of sampling events per primate host species or country SamplingEventID = ID number for each sampling event ISO3 = Country code. Allows matching to wrld_simpl map in R Country = Name of country SpeciesRichness = Primate species richness in the country GDPCAP = Gross Domestic Product per capita in US$ AirportDensity = Density of airports in number of airports per km2 LON = Longitude in decimal degrees of country centroid or sampling event LAT = Latitude in decimal degrees of country centroid or sampling event Missing data are recorded with NA