#define OUTFILE ST_PL_12L2M_PacificWide_27Oct2011_out #define INFILE ST_PL_12L2M_PacificWide_27Oct2011.txt #define NUMINDS 1173 #define NUMLOCI 12 #define LABEL 1 #define POPDATA 1 #define POPFLAG 1 #define PHENOTYPE 0 #define MARKERNAMES 1 #define MAPDISTANCES 0 #define ONEROWPERIND 1 #define PHASEINFO 0 #define PHASED 0 #define EXTRACOLS 0 #define MISSING -9 #define PLOIDY 2 #define MAXPOPS 1 #define BURNIN 2000000 #define NUMREPS 10000000 #define LINKAGE 0 #define NOADMIX 0 #define USEPOPINFO 0 #define FREQSCORR 0 #define LOCPRIOR 0 #define LOCISPOP 0 #define ONEFST 0 #define INFERALPHA 1 #define POPALPHAS 0 #define INFERLAMBDA 0 #define POPSPECIFICLAMBDA 0 #define PHASED 0 #define LOG10RMIN -4.0 #define LOG10RMAX 1.0 #define LOG10RPROPSD 0.1 #define LOG10RSTART -2.0 #define COMPUTEPROB 1 #define ADMBURNIN 500 #define USEPOPINFO 0 #define GENSBACK 1 #define MIGRPRIOR 0.001 #define PFROMPOPFLAGONLY 0 #define PRINTKLD 0 #define PRINTLAMBDA 0 #define PRINTQSUM 0 #define SITEBYSITE 0 #define PRINTQHAT 0 #define UPDATEFREQ 0 #define PRINTLIKES 0 #define INTERMEDSAVE 0 #define ECHODATA 1 #define ANCESTDIST 0 #define NUMBOXES 1000 #define ANCESTPINT 0.90 #define ALPHA 1.0 #define FPRIORMEAN 0.01 #define FPRIORSD 0.05 #define LAMBDA 1.0 #define UNIFPRIORALPHA 1 #define ALPHAMAX 20.0 #define ALPHAPRIORA 0.05 #define ALPHAPRIORB 0.001 #define ALPHAPROPSD 0.025 #define STARTATPOPINFO 0 #define METROFREQ 10 #define REPORTHITRATE 0 #define RANDOMIZE 0