Data used in Muschick, M., Soria-Carrasco, V., Nosil, P. (2020) Adaptive zones shape the magnitude of premating reproductive isolation in Timema stick insects. Phil Trans Soc B Summary tree from Riesch et al. (2017) NEE https://doi.org/10.1038/s41559-017-0082 100kmreads_10kdepth_20QS_85cov_phylob.4runs.summary-ca.tree 1000 trees taken from the Batesian posterior distribution of trees Riesch et al. (2017) and used for transition rate analyses 100kmreads_10kdepth_20QS_85cov_phylob.4runs.1000.trees.bz2 R data containing output of running transition rate analysis on the 1000 trees estimating rates and states jointly 100kmreads_10kdepth_20QS_85cov_phylob.4runs.jointML.1000runs.RData R data containing output of running transition analysis on the 1000 trees using marginal reconstruction 100kmreads_10kdepth_20QS_85cov_phylob.4runs.marginalML.1000runs.RData Concatenated multiple alignment of LGs, including invariable positions and ambiguities. The ".partitions" file indicate LG delimitations concatenated_lgs.fa concatenated_lgs.partitions Concatenated multiple alignment of LGs, only variable positions. The ".partitions" file indicate LG delimitations concatenated_lgs.varsites.fa concatenated_lgs.varsites.partitions Phylogenetic hypotheses phylohypos.nex Host preference data host_preference.dsv Variables: locality abbreviation of sampling site name, sometimes with host abbreviation appended lat latitude in decimal degrees, WGS84 lon longitude in decimal degrees, WGS84 species abbreviation of the Timema species, usually first four letters of species name native the host plant (abbreviated, see host_lookup.txt) from which the tested individuals were collected offer1 the first host plant species (abbreviated, see host_lookup.txt) that was offered in a trial offer2 the second host plant species (abbreviated, see host_lookup.txt) that was offered in a trial cat category of the trial. 2: two different flowering plants were offered; 3: one flowering plant and one gymnosperm plant was offered accept1 percentage of individuals which were found resting on offer1 at the end of their trial n number of individuals tested comp type of trial in terms of host plant genera offered comp_id trials with the same ID were used to calculate preference divergence. Usually paired by syntopy / geographic proximity. Auxiliary file used for beta regression to test influence of divergence in host plant preference (see hpd.glm.R script for details) host_lookup.txt