##fileformat=VCFv4.2 ##fileDate=20200102 ##source=Stacks v2.1 ##INFO= ##INFO= ##INFO= ##INFO= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##INFO= #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT JELm119_2016_S542_L001_R1_001.1 JELm119e1_S328_L001_R1_001.1 JELm119e10_S307_L001_R1_001.1 JELm119e11_S314_L001_R1_001.1 JELm119e12_S321_L001_R1_001.1 JELm119e13_S329_L001_R1_001.1 JELm119e14_S337_L001_R1_001.1 JELm119e15_S345_L001_R1_001.1 JELm119e16_S353_L001_R1_001.1 JELm119e17_S361_L001_R1_001.1 JELm119e2_S336_L001_R1_001.1 JELm119e3_S344_L001_R1_001.1 JELm119e4_S352_L001_R1_001.1 JELm119e5_S360_L001_R1_001.1 JELm119e6_S368_L001_R1_001.1 JELm119e7_S283_L001_R1_001.1 JELm119e8_S291_L001_R1_001.1 JELm119e9_S299_L001_R1_001.1 17 197 . C T . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 25 267 . T C . PASS NS=11;AF=0.273 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 26 246 . G T . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 38 174 . T C . PASS NS=108;AF=0.486 GT:DP:AD:GQ:GL 0/1:51:41,10:40:-12.60,-0.00,-95.75 ./. ./. 0/1:44:33,11:40:-17.36,0.00,-76.61 0/1:52:45,7:40:-4.34,-0.00,-106.06 0/1:34:25,9:40:-15.05,0.00,-58.38 ./. ./. 0/1:50:40,10:40:-12.90,-0.00,-93.39 0/1:44:33,11:40:-17.36,0.00,-76.61 ./. ./. ./. ./. ./. 0/1:30:21,9:40:-16.25,0.00,-48.97 0/1:55:44,10:40:-11.70,-0.00,-102.81 0/1:93:68,25:40:-39.81,0.00,-154.80 46 191 . A T . PASS NS=113;AF=0.004 GT:DP:AD:GQ:GL 0/0:26:19,2:40:-0.00,-4.62,-21.43 ./. ./. 0/0:15:12,1:40:-0.00,-3.59,-14.65 0/0:14:10,3:18:-0.02,-1.36,-10.16 0/0:9:9,0:40:-0.00,-3.64,-12.40 0/0:7:5,1:22:-0.01,-1.71,-6.76 0/0:12:10,0:40:-0.00,-3.91,-13.52 0/0:7:5,0:32:-0.00,-2.57,-7.88 0/0:8:5,0:32:-0.00,-2.57,-7.88 ./. ./. ./. ./. ./. 0/0:11:8,1:31:-0.00,-2.52,-10.14 0/0:35:28,5:40:-0.00,-4.48,-28.21 0/0:16:13,1:40:-0.00,-3.86,-15.78 46 194 . G A . PASS NS=10;AF=0.050 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 46 221 . G C . PASS NS=100;AF=0.010 GT:DP:AD:GQ:GL 0/0:10:9,0:40:-0.00,-3.48,-15.16 ./. ./. 0/0:6:6,0:32:-0.00,-2.62,-10.84 0/0:8:7,0:35:-0.00,-2.90,-12.28 0/0:7:6,1:20:-0.01,-1.48,-9.41 0/0:2:2,0:20:-0.01,-1.49,-5.10 0/0:10:10,0:40:-0.00,-3.76,-16.60 0/0:3:3,0:23:-0.01,-1.77,-6.53 0/0:3:2,0:20:-0.01,-1.49,-5.10 ./. ./. ./. ./. ./. 0/0:4:4,0:26:-0.00,-2.05,-7.96 0/0:18:17,1:40:-0.00,-4.61,-25.23 0/0:8:8,0:38:-0.00,-3.19,-13.72 84 204 . A G . PASS NS=21;AF=0.500 GT:DP:AD:GQ:GL 0/1:187:113,74:40:-134.25,0.00,-233.77 0/1:41:25,16:40:-30.42,0.00,-53.58 0/1:218:120,97:40:-183.79,0.00,-242.59 0/1:137:40,96:40:-205.53,0.00,-63.28 ./. 0/1:334:159,172:40:-340.49,0.00,-307.67 0/1:177:85,90:40:-178.57,0.00,-166.11 ./. 0/1:127:74,51:40:-94.31,0.00,-153.10 0/1:141:86,54:40:-97.44,0.00,-179.15 ./. ./. ./. ./. ./. ./. ./. 0/1:118:38,79:40:-167.96,0.00,-63.88 96 178 . G A . PASS NS=80;AF=0.019 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 96 224 . T A . PASS NS=72;AF=0.035 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 96 227 . G A . PASS NS=72;AF=0.021 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 98 214 . A G . PASS NS=13;AF=0.462 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 117 214 . T C . PASS NS=25;AF=0.020 GT:DP:AD:GQ:GL 0/1:43:36,7:40:-6.25,-0.00,-95.17 ./. 0/0:40:40,0:40:-0.00,-13.76,-121.79 0/0:26:26,0:40:-0.00,-9.56,-79.95 0/0:36:36,0:40:-0.00,-12.56,-109.83 0/0:34:34,0:40:-0.00,-11.96,-103.86 ./. 0/0:42:42,0:40:-0.00,-14.37,-127.76 0/0:41:41,0:40:-0.00,-14.06,-124.78 0/0:30:30,0:40:-0.00,-10.76,-91.90 ./. ./. ./. ./. ./. 0/0:29:29,0:40:-0.00,-10.46,-88.91 0/0:82:82,0:40:0.00,-26.39,-247.30 0/0:62:62,0:40:-0.00,-20.38,-187.53 120 255 . C T . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 126 290 . C T . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 143 178 . A G . PASS NS=13;AF=0.077 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 149 184 . G A . PASS NS=105;AF=0.005 GT:DP:AD:GQ:GL 0/0:117:110,6:40:0.00,-20.01,-281.06 0/0:27:27,0:40:-0.00,-9.38,-74.62 0/0:40:39,1:40:-0.00,-10.60,-104.11 0/0:30:30,0:40:-0.00,-10.28,-82.66 ./. 0/0:30:30,0:40:-0.00,-10.28,-82.66 ./. 0/0:36:33,3:40:-0.00,-4.04,-82.66 0/0:55:50,4:40:-0.00,-6.76,-125.56 ./. ./. 0/0:74:73,0:40:0.00,-23.19,-197.95 0/0:44:44,0:40:-0.00,-14.49,-120.20 ./. 0/0:54:53,1:40:-0.00,-14.81,-141.65 0/0:31:31,0:40:-0.00,-10.58,-85.34 ./. ./. 149 229 . T C . PASS NS=105;AF=0.029 GT:DP:AD:GQ:GL 0/0:117:110,7:40:0.00,-15.74,-299.95 0/0:27:26,0:40:-0.00,-8.63,-77.35 0/1:41:33,8:40:-9.99,-0.00,-84.45 0/1:30:24,6:40:-7.51,-0.00,-61.74 ./. 0/1:30:26,4:23:-1.74,-0.01,-67.53 ./. 0/1:36:22,12:40:-23.65,0.00,-54.76 0/1:55:43,12:40:-17.34,0.00,-109.15 ./. ./. 0/0:74:74,0:40:0.00,-23.05,-216.11 0/0:44:44,0:40:-0.00,-14.04,-129.39 ./. 0/0:54:54,0:40:0.00,-17.05,-158.30 0/1:36:28,8:40:-11.49,-0.00,-71.50 ./. ./. 186 85 . A T . PASS NS=25;AF=0.020 GT:DP:AD:GQ:GL 0/0:43:42,1:40:-0.00,-11.42,-135.08 ./. 0/1:44:37,7:40:-7.72,-0.00,-107.16 ./. 0/0:30:30,0:40:-0.00,-10.75,-99.44 0/0:36:35,0:40:-0.00,-12.25,-115.64 ./. 0/0:16:15,0:40:-0.00,-6.24,-50.85 0/0:49:49,0:40:-0.00,-16.46,-161.00 0/0:61:60,1:40:0.00,-16.83,-193.40 ./. ./. 0/0:33:33,0:40:-0.00,-11.65,-109.16 ./. ./. ./. 0/0:86:86,0:40:-0.00,-27.59,-280.88 0/0:48:45,3:40:-0.00,-6.44,-138.32 186 153 . C T . PASS NS=25;AF=0.020 GT:DP:AD:GQ:GL 0/0:42:41,1:40:-0.00,-11.79,-101.29 ./. 0/1:44:37,7:31:-2.46,-0.00,-78.99 ./. 0/0:30:30,0:40:-0.00,-10.68,-76.53 0/0:36:36,0:40:-0.00,-12.47,-91.38 ./. 0/0:16:15,1:40:-0.00,-4.01,-36.91 0/0:49:49,0:40:0.00,-16.37,-123.57 0/0:60:59,1:40:0.00,-17.19,-145.85 ./. ./. 0/0:33:33,0:40:-0.00,-11.57,-83.95 ./. ./. ./. 0/0:84:84,0:40:-0.00,-26.85,-210.23 0/0:48:45,3:40:-0.00,-8.64,-106.24 187 159 . T A . PASS NS=26;AF=0.231 GT:DP:AD:GQ:GL ./. 0/0:38:37,1:40:-0.00,-9.01,-103.24 0/1:168:135,32:40:-39.33,0.00,-330.79 0/1:101:45,56:40:-126.57,0.00,-97.78 0/0:39:35,4:13:-0.05,-0.94,-89.25 0/0:24:23,1:40:-0.00,-4.81,-63.92 0/0:77:69,8:15:-0.04,-1.10,-173.51 0/0:165:149,15:40:-0.00,-7.53,-378.55 0/0:186:171,15:40:0.00,-14.14,-440.35 0/1:33:26,7:40:-9.34,-0.00,-64.83 ./. ./. ./. ./. ./. 0/1:41:26,15:40:-29.42,0.00,-62.43 0/0:80:78,2:40:0.00,-18.82,-215.61 ./. 194 1 . A T . PASS NS=14;AF=0.036 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 194 195 . A T . PASS NS=13;AF=0.423 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 270 181 . C T . PASS NS=14;AF=0.321 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 341 296 . G T . PASS NS=23;AF=0.500 GT:DP:AD:GQ:GL 0/1:29:3,26:29:-71.01,-0.00,-2.31 ./. 0/1:7:1,6:36:-18.03,-0.00,-2.96 ./. 0/1:12:5,7:40:-19.50,-0.00,-13.37 0/1:29:4,25:40:-68.03,-0.00,-5.28 0/1:11:3,8:40:-22.78,-0.00,-7.71 0/1:19:5,14:40:-38.26,-0.00,-11.27 0/1:15:4,11:40:-30.52,-0.00,-9.49 ./. ./. ./. ./. ./. ./. ./. 0/1:41:17,23:40:-58.76,0.00,-40.71 0/1:32:6,26:40:-70.11,-0.00,-10.34 347 154 . A G . PASS NS=23;AF=0.500 GT:DP:AD:GQ:GL 0/1:75:40,33:40:-61.54,0.00,-78.71 ./. 0/1:30:11,19:40:-39.99,0.00,-20.27 0/1:87:50,37:40:-67.19,0.00,-99.10 0/1:50:20,30:40:-61.05,0.00,-36.41 0/1:29:14,15:40:-30.45,-0.00,-27.94 0/1:25:12,13:40:-26.73,-0.00,-24.22 0/1:27:11,16:40:-33.51,-0.00,-21.17 0/1:34:7,26:40:-56.31,-0.00,-9.53 ./. ./. ./. ./. ./. ./. 0/1:30:8,22:40:-47.37,-0.00,-12.89 0/1:56:19,36:40:-74.31,0.00,-32.45 ./. 356 215 . G T . PASS NS=97;AF=0.500 GT:DP:AD:GQ:GL 0/1:118:16,101:40:-233.87,-0.00,-9.12 0/1:26:8,18:40:-41.98,0.00,-15.29 ./. 0/1:155:47,108:40:-240.96,0.00,-79.58 0/1:264:72,192:40:-430.08,0.00,-112.90 ./. ./. 0/1:127:27,100:40:-228.23,0.00,-35.17 ./. 0/1:172:37,135:40:-307.16,0.00,-48.07 ./. ./. 0/1:77:19,58:40:-132.32,0.00,-29.04 0/1:38:13,25:40:-56.87,0.00,-24.90 0/1:74:16,58:40:-133.22,0.00,-22.02 ./. 0/1:386:116,270:40:-599.47,0.00,-192.49 0/1:347:83,264:40:-595.32,0.00,-117.05 366 1 . A T . PASS NS=10;AF=0.100 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 371 1 . A T . PASS NS=10;AF=0.100 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 405 3 . T A . PASS NS=106;AF=0.005 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 405 301 . T G . PASS NS=97;AF=0.253 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 407 47 . C T . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 407 71 . C T . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 409 258 . G T . PASS NS=24;AF=0.500 GT:DP:AD:GQ:GL 0/1:34:22,12:40:-33.11,0.00,-69.79 ./. 0/1:61:33,28:40:-81.58,0.00,-100.58 ./. 0/1:43:29,14:40:-37.48,0.00,-91.84 0/1:59:32,27:40:-78.65,0.00,-97.64 ./. 0/1:43:33,10:40:-23.33,0.00,-105.99 0/1:53:33,20:40:-55.69,0.00,-102.98 ./. ./. ./. ./. ./. ./. 0/1:50:32,18:40:-49.52,0.00,-100.35 0/1:143:100,43:40:-109.97,0.00,-312.90 0/1:74:52,22:40:-56.45,0.00,-163.87 410 270 . G T . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 420 94 . A G . PASS NS=17;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 422 97 . A T . PASS NS=13;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 440 249 . T G . PASS NS=16;AF=0.438 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 447 17 . C T . PASS NS=97;AF=0.005 GT:DP:AD:GQ:GL ./. ./. 0/0:120:120,0:40:0.00,-37.62,-375.26 ./. ./. ./. 0/0:69:68,0:40:0.00,-21.99,-213.62 0/0:83:83,0:40:-0.00,-26.50,-260.25 0/0:85:85,0:40:0.00,-27.10,-266.47 0/0:96:95,0:40:0.00,-30.10,-297.55 ./. ./. 0/0:36:35,0:40:-0.00,-12.06,-111.04 0/0:16:16,0:40:-0.00,-6.35,-51.98 0/0:32:32,0:40:-0.00,-11.16,-101.72 ./. 0/0:421:420,0:40:0.00,-127.83,-1307.82 0/0:175:174,0:40:0.00,-53.86,-543.12 447 202 . T G . PASS NS=92;AF=0.098 GT:DP:AD:GQ:GL ./. ./. 0/0:120:119,0:40:0.00,-36.43,-406.80 ./. ./. ./. 0/1:69:60,9:40:-9.26,-0.00,-184.44 0/0:82:82,0:40:-0.00,-25.30,-280.77 0/0:85:85,0:40:0.00,-26.21,-290.99 0/0:96:96,0:40:-0.00,-29.51,-328.46 ./. ./. 0/0:36:35,1:40:-0.00,-8.06,-117.27 0/0:16:16,0:40:-0.00,-5.45,-55.96 0/1:32:26,6:40:-10.18,-0.00,-79.76 ./. 0/0:420:420,0:40:0.00,-126.99,-1432.09 0/0:175:175,0:40:0.00,-53.28,-597.55 447 206 . G A . PASS NS=96;AF=0.016 GT:DP:AD:GQ:GL ./. ./. 0/0:120:120,0:40:0.00,-37.35,-347.90 ./. ./. ./. 0/0:69:65,4:40:-0.00,-10.50,-177.95 0/0:82:82,0:40:0.00,-25.93,-238.44 0/0:85:85,0:40:0.00,-26.83,-247.08 0/0:96:96,0:40:0.00,-30.14,-278.77 ./. ./. 0/0:36:36,0:40:-0.00,-12.11,-105.93 0/0:16:16,0:40:-0.00,-6.10,-48.32 ./. ./. 0/0:420:418,0:40:0.00,-126.89,-1206.32 0/0:175:175,0:40:-0.00,-53.87,-506.34 460 2 . A T . PASS NS=28;AF=0.036 GT:DP:AD:GQ:GL ./. ./. 0/0:29:29,0:40:-0.00,-9.31,-100.17 0/0:13:13,0:40:-0.00,-4.50,-46.09 0/0:27:27,0:40:-0.00,-8.71,-93.41 0/0:20:20,0:40:-0.00,-6.60,-69.75 0/0:14:14,0:40:-0.00,-4.80,-49.47 0/0:26:26,0:40:-0.00,-8.41,-90.03 0/0:27:27,0:40:-0.00,-8.71,-93.41 0/0:10:10,0:40:-0.00,-3.59,-35.95 ./. ./. ./. ./. ./. 0/0:16:16,0:40:-0.00,-5.40,-56.23 0/0:26:25,1:40:-0.00,-5.03,-83.27 0/1:6:4,2:40:-4.37,-0.00,-13.28 460 230 . T G . PASS NS=28;AF=0.482 GT:DP:AD:GQ:GL 0/1:25:18,7:40:-13.44,-0.00,-48.44 ./. 0/1:82:63,18:40:-29.62,0.00,-166.69 0/1:48:40,8:40:-9.53,-0.00,-107.57 0/1:62:49,13:40:-20.33,0.00,-130.38 0/1:50:40,10:40:-14.93,0.00,-106.97 0/1:40:32,8:40:-11.93,-0.00,-85.96 0/1:25:19,6:40:-10.44,-0.00,-51.44 0/1:55:42,13:40:-22.43,0.00,-111.47 0/0:36:33,3:24:-0.01,-1.88,-92.04 ./. ./. ./. ./. ./. 0/1:37:27,10:40:-18.84,0.00,-71.85 0/1:199:170,28:40:-24.47,0.00,-452.72 ./. 474 170 . A G . PASS NS=10;AF=0.450 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 474 194 . G A . PASS NS=14;AF=0.143 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 474 210 . T C . PASS NS=89;AF=0.011 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 476 61 . T C . PASS NS=72;AF=0.007 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 485 89 . T C . PASS NS=20;AF=0.350 GT:DP:AD:GQ:GL 0/0:77:68,8:22:-0.01,-1.68,-164.16 ./. 0/1:95:77,18:40:-19.63,0.00,-181.08 ./. 0/1:52:41,10:40:-11.23,-0.00,-97.07 ./. 0/0:60:56,4:40:-0.00,-7.67,-142.54 ./. ./. ./. ./. 0/0:17:17,0:40:-0.00,-5.56,-48.03 ./. ./. 0/0:14:14,0:40:-0.00,-4.66,-39.93 0/1:65:56,9:40:-4.33,-0.00,-133.37 0/1:227:195,31:40:-15.41,0.00,-460.40 0/1:141:117,23:40:-19.62,0.00,-275.58 515 196 . A C . PASS NS=79;AF=0.006 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 530 315 . T G . PASS NS=74;AF=0.020 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 545 300 . T G . PASS NS=12;AF=0.417 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 566 240 . G T . PASS NS=10;AF=0.050 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 580 165 . T C . PASS NS=20;AF=0.025 GT:DP:AD:GQ:GL 0/1:79:49,30:40:-56.35,0.00,-110.14 0/0:12:12,0:40:-0.00,-4.94,-34.80 0/0:65:63,2:40:0.00,-15.42,-167.76 ./. 0/0:53:51,1:40:-0.00,-14.24,-137.91 ./. ./. 0/0:45:44,1:40:-0.00,-12.13,-118.92 ./. 0/0:27:27,0:40:-0.00,-9.44,-75.50 ./. 0/0:15:15,0:40:-0.00,-5.84,-42.94 ./. ./. ./. 0/0:45:45,0:40:-0.00,-14.85,-124.34 0/0:183:180,1:40:0.00,-52.96,-487.95 ./. 642 300 . G T . PASS NS=13;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 653 213 . C T . PASS NS=28;AF=0.321 GT:DP:AD:GQ:GL ./. ./. 0/0:56:52,2:40:-0.00,-10.47,-123.47 0/0:39:35,4:16:-0.03,-1.12,-77.10 0/1:34:29,5:35:-2.85,-0.00,-62.83 0/1:41:34,7:40:-5.64,-0.00,-72.94 0/1:27:23,4:31:-2.50,-0.00,-50.27 0/0:48:43,5:18:-0.02,-1.36,-94.18 0/0:52:47,4:40:-0.00,-4.68,-106.37 0/1:45:37,7:40:-4.74,-0.00,-79.37 ./. ./. ./. ./. ./. 0/0:42:39,3:40:-0.00,-4.43,-89.28 0/1:138:115,22:40:-13.52,-0.00,-241.98 0/0:35:33,2:40:-0.00,-4.78,-77.07 670 231 . C T . PASS NS=12;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 679 277 . G T . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 750 257 . T G . PASS NS=13;AF=0.462 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 817 47 . G T . PASS NS=14;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 838 186 . A C . PASS NS=10;AF=0.050 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 838 248 . G A . PASS NS=12;AF=0.042 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 865 246 . C G . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 907 121 . T C . PASS NS=108;AF=0.009 GT:DP:AD:GQ:GL 0/0:54:53,1:40:-0.00,-13.68,-219.76 ./. 0/0:79:79,0:40:0.00,-25.38,-332.70 0/0:43:43,0:40:-0.00,-14.55,-182.11 0/0:76:76,0:40:0.00,-24.48,-320.15 0/0:62:62,0:40:0.00,-20.27,-261.59 0/0:43:43,0:40:-0.00,-14.55,-182.11 0/0:72:71,0:40:0.00,-22.98,-299.24 0/0:46:46,0:40:-0.00,-15.45,-194.66 0/0:58:58,0:40:-0.00,-19.06,-244.86 ./. ./. ./. ./. ./. 0/0:46:46,0:40:-0.00,-15.45,-194.66 0/0:211:211,0:40:-0.00,-65.12,-884.86 0/0:62:62,0:40:0.00,-20.27,-261.59 917 200 . A G . PASS NS=14;AF=0.464 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 917 268 . T C . PASS NS=14;AF=0.464 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 917 275 . C A . PASS NS=14;AF=0.464 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 917 293 . G T . PASS NS=14;AF=0.464 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 926 1 . A T . PASS NS=27;AF=0.019 GT:DP:AD:GQ:GL 0/0:1:1,0:19:-0.02,-1.40,-5.47 ./. 0/0:29:29,0:40:-0.00,-9.81,-96.08 0/0:18:18,0:40:-0.00,-6.50,-60.48 0/0:22:22,0:40:-0.00,-7.70,-73.42 0/0:19:19,0:40:-0.00,-6.80,-63.71 0/0:12:12,0:40:-0.00,-4.69,-41.06 0/0:18:18,0:40:-0.00,-6.50,-60.48 0/0:19:19,0:40:-0.00,-6.80,-63.71 0/0:19:19,0:40:-0.00,-6.80,-63.71 ./. ./. ./. ./. ./. 0/0:26:26,0:40:-0.00,-8.90,-86.37 0/0:75:74,1:40:0.00,-20.40,-238.48 0/0:40:39,1:40:-0.00,-9.88,-125.20 939 297 . T G . PASS NS=22;AF=0.318 GT:DP:AD:GQ:GL ./. ./. ./. 0/1:43:33,10:40:-32.50,0.00,-138.50 0/1:83:69,14:40:-38.57,0.00,-289.45 0/0:26:26,0:40:-0.00,-7.66,-119.58 ./. 0/0:17:17,0:40:-0.00,-4.95,-78.83 0/0:20:20,0:40:-0.00,-5.85,-92.41 0/0:24:24,0:40:-0.00,-7.05,-110.52 ./. ./. ./. ./. ./. 0/0:27:27,0:40:-0.00,-7.96,-124.11 0/1:162:134,28:40:-78.18,0.00,-559.97 0/1:73:53,20:40:-68.75,0.00,-220.02 951 293 . C T . PASS NS=27;AF=0.500 GT:DP:AD:GQ:GL ./. 0/1:82:59,23:40:-45.11,0.00,-151.14 0/1:55:25,30:40:-73.81,0.00,-59.25 ./. 0/1:58:35,23:40:-52.32,0.00,-87.76 0/1:51:17,34:40:-86.78,0.00,-36.93 0/1:63:39,24:40:-53.76,0.00,-98.03 0/1:43:14,29:40:-74.47,0.00,-30.51 0/1:37:13,24:40:-61.57,0.00,-29.37 0/1:71:34,37:40:-89.59,0.00,-80.92 ./. ./. ./. 0/1:39:28,11:40:-22.73,0.00,-72.89 ./. 0/1:93:50,43:40:-100.62,0.00,-121.36 ./. 0/1:94:47,46:40:-109.45,0.00,-112.54 998 255 . T G . PASS NS=16;AF=0.406 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1010 287 . T G . PASS NS=77;AF=0.078 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1018 86 . A T . PASS NS=25;AF=0.500 GT:DP:AD:GQ:GL ./. ./. 0/1:29:11,18:40:-72.74,0.00,-41.67 0/1:15:5,10:40:-41.75,0.00,-19.48 0/1:33:16,17:40:-67.14,0.00,-62.47 0/1:16:14,2:40:-6.24,-0.00,-58.78 0/1:14:7,7:40:-28.84,0.00,-28.58 ./. 0/1:11:6,5:40:-20.94,0.00,-25.08 0/1:8:4,4:40:-17.45,0.00,-17.18 ./. ./. ./. ./. ./. 0/1:22:9,13:40:-52.84,0.00,-34.97 0/1:1:1,0:25:-1.95,-0.00,-6.09 0/1:25:17,8:40:-29.93,0.00,-69.28 1018 136 . G T . PASS NS=25;AF=0.020 GT:DP:AD:GQ:GL ./. ./. 0/0:170:170,0:40:-0.00,-52.92,-895.23 0/0:120:120,0:40:-0.00,-37.87,-632.59 0/0:139:139,0:40:-0.00,-43.59,-732.39 0/0:105:105,0:40:0.00,-33.36,-553.80 0/0:78:78,0:40:-0.00,-25.23,-411.97 ./. 0/0:55:55,0:40:-0.00,-18.30,-291.15 0/0:101:101,0:40:0.00,-32.15,-532.79 ./. ./. ./. ./. ./. 0/0:112:112,0:40:-0.00,-35.46,-590.57 0/0:5:5,0:39:-0.00,-3.25,-28.51 0/0:176:176,0:40:0.00,-54.73,-926.75 1018 145 . C A . PASS NS=12;AF=0.042 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1018 153 . G A . PASS NS=10;AF=0.100 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1024 17 . C T . PASS NS=84;AF=0.018 GT:DP:AD:GQ:GL 0/0:86:83,3:40:0.00,-17.52,-247.22 0/0:69:69,0:40:-0.00,-21.60,-213.53 0/0:32:31,1:40:-0.00,-7.41,-94.08 0/0:13:13,0:40:-0.00,-4.76,-42.01 0/1:76:63,13:40:-16.11,0.00,-171.45 ./. ./. 0/1:55:45,10:40:-13.24,-0.00,-122.63 0/0:28:26,2:38:-0.00,-3.15,-75.71 0/0:45:41,4:27:-0.00,-2.14,-115.52 ./. 0/0:48:48,0:40:-0.00,-15.29,-149.21 0/0:54:54,0:40:0.00,-17.09,-167.59 0/0:34:33,0:40:-0.00,-10.78,-103.27 ./. ./. ./. ./. 1024 55 . T C . PASS NS=84;AF=0.018 GT:DP:AD:GQ:GL 0/0:86:83,3:40:0.00,-16.99,-263.12 0/0:69:69,0:40:0.00,-21.66,-227.24 0/1:32:27,5:40:-5.77,-0.00,-79.73 0/1:13:10,3:40:-4.97,-0.00,-30.00 0/0:76:74,2:40:0.00,-17.25,-237.03 ./. ./. 0/0:55:50,5:16:-0.03,-1.17,-149.00 0/1:28:22,6:40:-10.24,-0.00,-64.63 0/0:45:42,3:40:-0.00,-4.66,-129.40 ./. 0/0:48:47,0:40:0.00,-15.05,-155.49 0/0:54:54,0:40:-0.00,-17.15,-178.32 0/0:34:34,0:40:-0.00,-11.13,-113.09 ./. ./. ./. ./. 1024 147 . G T . PASS NS=84;AF=0.024 GT:DP:AD:GQ:GL 0/0:86:82,4:40:-0.00,-12.96,-270.02 0/0:57:57,0:40:0.00,-17.97,-197.92 0/0:32:31,1:40:-0.00,-7.02,-105.21 0/0:13:13,0:40:-0.00,-4.73,-46.83 0/1:76:63,13:40:-20.95,0.00,-194.83 ./. ./. 0/1:55:44,11:40:-20.40,0.00,-135.91 0/0:28:26,2:30:-0.00,-2.38,-84.60 0/1:45:40,5:34:-2.81,-0.00,-125.18 ./. 0/0:48:47,1:40:-0.00,-11.83,-160.14 0/0:54:53,1:40:-0.00,-13.64,-180.75 0/0:33:33,0:40:-0.00,-10.75,-115.51 ./. ./. ./. ./. 1026 148 . G C . PASS NS=25;AF=0.340 GT:DP:AD:GQ:GL 0/0:40:39,1:40:-0.00,-9.59,-119.00 ./. ./. ./. 0/0:46:44,2:40:-0.00,-8.32,-131.30 0/1:49:41,8:40:-9.22,-0.00,-112.85 ./. 0/1:48:38,10:40:-15.67,0.00,-103.93 0/1:33:29,4:23:-1.74,-0.01,-80.77 0/1:53:44,8:40:-8.32,-0.00,-121.17 ./. 0/0:40:40,0:40:-0.00,-12.67,-125.15 ./. ./. ./. 0/1:52:42,10:40:-14.47,0.00,-115.02 0/1:74:63,11:40:-10.93,-0.00,-172.97 0/1:47:39,8:40:-9.82,-0.00,-107.30 1053 296 . G T . PASS NS=17;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1072 145 . C T . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL 0/1:46:15,31:40:-83.47,0.00,-32.94 ./. 0/1:28:6,22:40:-61.27,-0.00,-10.74 ./. 0/1:36:6,30:40:-83.41,-0.00,-8.33 0/1:28:7,21:40:-58.20,-0.00,-13.81 ./. 0/1:23:6,17:40:-47.43,-0.00,-12.24 0/1:33:8,25:40:-68.97,0.00,-15.37 0/1:25:5,20:40:-56.04,-0.00,-8.57 ./. ./. ./. ./. ./. 0/1:25:3,22:30:-62.17,-0.00,-2.44 0/1:90:20,70:40:-189.91,0.00,-35.05 0/1:39:9,30:40:-82.51,0.00,-16.64 1134 1 . A T . PASS NS=27;AF=0.037 GT:DP:AD:GQ:GL ./. ./. 0/0:35:35,0:40:-0.00,-11.70,-138.29 0/0:11:11,0:40:-0.00,-4.48,-44.99 0/0:57:57,0:40:0.00,-18.32,-223.82 0/0:36:36,0:40:-0.00,-12.00,-142.18 0/0:11:11,0:40:-0.00,-4.48,-44.99 0/0:25:25,0:40:-0.00,-8.69,-99.42 0/1:25:14,11:40:-34.07,0.00,-47.96 0/0:27:27,0:40:-0.00,-9.29,-107.19 ./. ./. ./. ./. ./. ./. 0/0:117:113,4:40:0.00,-20.83,-425.97 0/0:52:52,0:40:0.00,-16.82,-204.38 1138 1 . A T . PASS NS=24;AF=0.021 GT:DP:AD:GQ:GL ./. ./. 0/1:4:3,1:15:-1.08,-0.04,-10.30 0/0:17:17,0:40:-0.00,-6.36,-61.62 0/0:26:26,0:40:-0.00,-9.07,-93.07 0/0:25:24,1:40:-0.00,-5.27,-82.58 0/0:11:11,0:40:-0.00,-4.55,-40.66 0/0:14:14,0:40:-0.00,-5.46,-51.14 0/0:23:23,0:40:-0.00,-8.16,-82.58 0/0:14:14,0:40:-0.00,-5.46,-51.14 ./. ./. ./. ./. ./. 0/0:24:24,0:40:-0.00,-8.47,-86.08 0/0:68:68,0:40:0.00,-21.70,-239.80 0/0:39:39,0:40:-0.00,-12.98,-138.48 1143 270 . A T . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1291 178 . A G . PASS NS=23;AF=0.500 GT:DP:AD:GQ:GL ./. ./. 0/1:52:24,28:40:-59.40,0.00,-48.82 0/1:75:26,48:40:-104.76,0.00,-47.42 0/1:46:23,23:40:-48.21,0.00,-48.02 0/1:86:25,60:40:-132.63,0.00,-41.52 0/1:65:26,38:40:-81.78,0.00,-50.42 0/1:96:36,60:40:-129.33,0.00,-66.80 0/1:95:30,65:40:-142.62,0.00,-51.51 0/1:90:31,58:40:-126.24,0.00,-55.91 ./. ./. ./. ./. ./. 0/1:89:35,53:40:-113.55,0.00,-66.60 0/1:94:41,53:40:-111.75,0.00,-80.39 0/1:141:50,90:40:-194.07,0.00,-89.97 1376 300 . T G . PASS NS=16;AF=0.469 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1409 294 . G T . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1436 254 . T G . PASS NS=10;AF=0.450 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1502 175 . G A . PASS NS=118;AF=0.034 GT:DP:AD:GQ:GL 0/0:289:288,0:40:0.00,-88.42,-725.05 0/0:86:86,0:40:-0.00,-27.88,-217.48 1/1:16:0,16:40:-38.81,-5.51,-0.00 ./. ./. 0/0:121:115,5:40:0.00,-25.51,-277.79 0/0:122:115,6:40:0.00,-23.29,-275.28 ./. ./. ./. 0/0:29:29,0:40:-0.00,-10.80,-74.26 0/0:61:61,0:40:0.00,-20.39,-154.67 0/0:82:81,0:40:0.00,-26.38,-204.92 0/0:74:74,0:40:-0.00,-24.28,-187.33 0/0:61:61,0:40:0.00,-20.39,-154.67 ./. 0/0:340:314,23:40:0.00,-45.31,-732.59 ./. 1502 274 . C G . PASS NS=101;AF=0.094 GT:DP:AD:GQ:GL 0/1:289:214,65:40:-31.47,0.00,-293.57 0/0:86:76,10:40:-0.00,-8.18,-116.80 1/1:20:0,20:40:-33.75,-5.06,-0.00 ./. ./. 0/1:121:88,30:40:-17.44,0.00,-120.24 0/1:122:78,42:40:-37.86,0.00,-102.14 ./. ./. ./. 0/0:29:26,3:40:-0.00,-3.71,-41.53 0/0:61:53,8:40:-0.00,-4.35,-80.04 0/0:82:68,9:40:-0.00,-7.29,-104.55 0/0:74:68,4:40:-0.00,-14.58,-113.30 0/0:61:55,5:40:-0.00,-9.31,-88.79 ./. ./. ./. 1502 314 . T G . PASS NS=101;AF=0.015 GT:DP:AD:GQ:GL 0/0:131:124,7:40:-0.00,-13.01,-459.10 0/0:15:15,0:40:-0.00,-5.43,-60.78 ./. ./. ./. 0/0:62:60,2:40:-0.00,-11.77,-228.70 0/0:6:6,0:34:-0.00,-2.72,-25.64 ./. ./. ./. 0/0:11:11,0:40:-0.00,-4.23,-45.16 0/0:13:13,0:40:-0.00,-4.83,-52.97 0/0:23:22,1:40:-0.00,-3.93,-84.21 0/0:22:22,0:40:-0.00,-7.54,-88.12 0/0:20:20,0:40:-0.00,-6.94,-80.31 ./. ./. ./. 1528 225 . G T . PASS NS=15;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1597 154 . C T . PASS NS=25;AF=0.020 GT:DP:AD:GQ:GL 0/1:24:17,7:40:-9.50,-0.00,-37.70 0/0:4:4,0:33:-0.00,-2.67,-12.62 ./. ./. 0/0:15:15,0:40:-0.00,-5.97,-41.18 0/0:13:13,0:40:-0.00,-5.37,-35.99 0/0:8:8,0:40:-0.00,-3.87,-23.01 ./. 0/0:6:6,0:39:-0.00,-3.27,-17.82 0/0:13:13,0:40:-0.00,-5.37,-35.99 ./. 0/0:5:5,0:36:-0.00,-2.97,-15.22 ./. 0/0:3:3,0:30:-0.00,-2.37,-10.03 ./. ./. ./. 0/0:18:18,0:40:-0.00,-6.87,-48.96 1597 315 . T G . PASS NS=24;AF=0.479 GT:DP:AD:GQ:GL ./. 0/1:49:43,6:40:-6.99,-0.00,-131.79 ./. ./. 0/1:84:55,29:40:-73.64,0.00,-161.53 0/1:70:55,15:40:-30.87,0.00,-165.74 0/1:49:37,12:40:-27.12,0.00,-111.66 ./. 0/1:59:40,19:40:-47.60,0.00,-118.72 0/1:76:62,14:40:-25.71,0.00,-187.42 ./. 0/1:36:31,5:40:-7.54,-0.00,-95.44 ./. 0/1:28:22,6:40:-13.31,-0.00,-67.64 ./. ./. ./. 0/1:112:71,40:40:-102.42,0.00,-207.09 1631 31 . T C . PASS NS=25;AF=0.480 GT:DP:AD:GQ:GL ./. ./. 0/0:76:72,4:40:-0.00,-7.70,-232.80 0/1:32:28,4:40:-5.54,-0.00,-88.17 0/1:71:59,12:40:-21.11,0.00,-182.24 0/1:50:41,9:40:-17.19,0.00,-127.12 0/1:45:39,6:40:-8.46,-0.00,-121.80 0/1:52:44,8:40:-13.18,-0.00,-136.76 0/1:59:51,8:40:-11.07,-0.00,-158.55 0/1:49:44,5:40:-3.84,-0.00,-137.66 ./. ./. 0/1:21:18,3:40:-5.44,-0.00,-57.35 ./. ./. ./. ./. 0/1:103:87,15:40:-22.02,0.00,-268.47 1631 148 . G A . PASS NS=15;AF=0.467 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1650 198 . A G . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1683 51 . C G . PASS NS=15;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1737 247 . T G . PASS NS=14;AF=0.429 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1791 281 . C G . PASS NS=90;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1797 109 . A T . PASS NS=10;AF=0.150 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1864 149 . C G . PASS NS=10;AF=0.300 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 1895 100 . A G . PASS NS=9;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. 0/1:22:6,16:40:-62.30,0.00,-20.52 0/1:47:13,34:40:-129.77,0.00,-42.16 0/1:27:3,24:40:-94.13,-0.00,-6.51 0/1:24:9,15:40:-57.53,0.00,-32.41 0/1:27:4,23:40:-89.96,-0.00,-10.68 0/1:39:7,32:40:-123.85,0.00,-19.57 0/1:33:10,23:40:-88.15,0.00,-33.87 ./. ./. ./. ./. ./. 0/1:35:8,27:40:-104.22,0.00,-24.94 ./. 0/1:57:16,41:40:-155.93,0.00,-51.65 1907 186 . C T . PASS NS=17;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2103 157 . A T . PASS NS=20;AF=0.025 GT:DP:AD:GQ:GL ./. 0/0:4:4,0:26:-0.00,-2.00,-8.23 0/0:42:38,3:40:-0.00,-8.11,-54.98 0/0:20:18,0:40:-0.00,-6.02,-29.34 ./. 0/0:13:11,1:34:-0.00,-2.79,-17.28 ./. 0/0:20:17,1:40:-0.00,-4.51,-26.33 0/0:23:19,2:40:-0.00,-3.87,-27.84 0/0:37:30,2:40:-0.00,-7.03,-44.43 ./. 0/1:5:2,3:28:-2.25,-0.00,-2.94 ./. ./. ./. 0/0:6:4,0:26:-0.00,-2.00,-8.23 ./. 0/0:38:31,3:40:-0.00,-6.10,-44.43 2103 171 . C A . PASS NS=9;AF=0.056 GT:DP:AD:GQ:GL ./. ./. 0/0:43:32,4:40:-0.00,-5.29,-37.00 0/0:19:13,2:25:-0.00,-1.97,-15.80 ./. ./. ./. ./. 0/0:19:15,0:40:-0.00,-4.46,-20.79 0/0:31:25,3:40:-0.00,-4.32,-29.51 ./. 0/1:4:2,2:15:-1.11,-0.03,-3.20 0/0:3:2,0:13:-0.06,-0.92,-4.63 0/0:9:6,1:14:-0.04,-1.04,-8.36 ./. 0/0:8:7,1:18:-0.02,-1.30,-9.59 ./. 0/0:32:26,1:40:-0.00,-6.54,-33.26 2103 172 . A G . PASS NS=23;AF=0.022 GT:DP:AD:GQ:GL ./. 0/0:4:4,0:32:-0.00,-2.55,-9.32 0/0:43:41,1:40:-0.00,-11.94,-73.09 0/0:19:19,0:40:-0.00,-6.96,-35.89 ./. 0/0:10:10,0:40:-0.00,-4.31,-19.95 ./. 0/0:20:19,0:40:-0.00,-6.96,-35.89 0/0:17:17,0:40:-0.00,-6.37,-32.35 0/0:32:31,1:40:-0.00,-9.00,-55.38 0/0:4:4,0:32:-0.00,-2.55,-9.32 0/0:4:4,0:32:-0.00,-2.55,-9.32 0/0:3:3,0:28:-0.00,-2.26,-7.55 ./. 0/1:4:2,2:14:-1.04,-0.04,-3.27 0/0:8:7,0:40:-0.00,-3.43,-14.64 ./. 0/0:32:29,1:40:-0.00,-8.41,-51.84 2103 173 . A C . PASS NS=9;AF=0.056 GT:DP:AD:GQ:GL ./. 0/0:4:3,0:20:-0.01,-1.49,-6.13 ./. ./. ./. 0/1:10:6,4:24:-1.83,-0.01,-6.62 ./. 0/0:18:13,2:28:-0.00,-2.22,-16.64 ./. ./. 0/0:4:4,0:23:-0.01,-1.77,-7.44 0/0:4:3,0:20:-0.01,-1.49,-6.13 0/0:3:2,0:17:-0.03,-1.22,-4.82 0/0:9:9,0:38:-0.00,-3.16,-14.01 0/0:4:4,0:23:-0.01,-1.77,-7.44 0/0:8:5,1:15:-0.04,-1.05,-7.47 ./. ./. 2103 175 . A T . PASS NS=11;AF=0.045 GT:DP:AD:GQ:GL ./. ./. 0/0:39:38,0:40:-0.00,-11.86,-75.99 0/0:15:14,0:40:-0.00,-4.76,-29.36 ./. 0/0:9:9,0:39:-0.00,-3.28,-19.65 ./. 0/0:15:14,1:38:-0.00,-3.11,-27.42 0/0:14:13,1:34:-0.00,-2.82,-25.47 0/0:24:24,0:40:-0.00,-7.72,-48.79 0/0:3:3,0:20:-0.01,-1.51,-8.00 ./. ./. 0/0:4:4,0:23:-0.01,-1.80,-9.94 0/0:2:2,0:17:-0.03,-1.23,-6.07 0/1:6:4,2:20:-1.51,-0.01,-7.56 ./. 0/0:24:22,1:40:-0.00,-5.48,-42.96 2159 207 . C G . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL 0/1:136:53,80:40:-190.05,0.00,-112.93 0/1:70:39,31:40:-69.48,0.00,-92.00 0/1:84:42,42:40:-96.59,0.00,-96.34 ./. ./. 0/1:83:34,49:40:-116.82,0.00,-73.86 0/1:58:26,32:40:-75.93,0.00,-58.60 ./. ./. 0/1:81:43,38:40:-86.10,0.00,-100.09 0/1:38:16,22:40:-53.47,0.00,-36.14 0/1:53:18,34:40:-83.43,0.00,-37.62 0/1:88:41,47:40:-109.62,0.00,-92.29 0/1:39:18,21:40:-50.32,0.00,-41.53 0/1:49:16,32:40:-78.93,0.00,-33.13 ./. ./. ./. 2188 118 . C T . PASS NS=23;AF=0.500 GT:DP:AD:GQ:GL 0/1:49:6,24:40:-52.19,-0.00,-7.76 0/1:32:7,25:40:-54.05,-0.00,-9.62 0/1:56:10,46:40:-98.42,-0.00,-9.79 ./. ./. ./. ./. ./. ./. 0/1:52:9,43:40:-92.26,-0.00,-8.54 ./. ./. 0/1:28:8,20:40:-42.97,-0.00,-13.27 0/1:44:10,34:40:-72.55,-0.00,-13.39 0/1:56:12,44:40:-93.51,-0.00,-14.71 0/1:47:11,36:40:-76.57,-0.00,-14.95 ./. 0/1:57:13,44:40:-93.21,0.00,-16.86 2241 239 . G T . PASS NS=13;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2266 230 . G T . PASS NS=15;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2365 10 . T A . PASS NS=91;AF=0.445 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2365 140 . T A . PASS NS=92;AF=0.467 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2370 227 . T G . PASS NS=15;AF=0.467 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2393 294 . G T . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2512 1 . A T . PASS NS=126;AF=0.036 GT:DP:AD:GQ:GL 0/0:37:37,0:40:-0.00,-12.17,-157.58 0/0:11:11,0:40:-0.00,-4.35,-48.41 0/0:35:35,0:40:-0.00,-11.57,-149.18 0/0:16:16,0:40:-0.00,-5.85,-69.40 ./. 0/0:37:37,0:40:-0.00,-12.17,-157.58 0/0:15:15,0:40:-0.00,-5.55,-65.20 0/0:27:27,0:40:-0.00,-9.16,-115.59 0/0:24:24,0:40:-0.00,-8.26,-103.00 0/0:23:23,0:40:-0.00,-7.96,-98.80 ./. ./. ./. 0/0:12:12,0:40:-0.00,-4.65,-52.61 0/0:13:13,0:40:-0.00,-4.95,-56.81 0/0:19:19,0:40:-0.00,-6.76,-82.00 0/0:114:111,3:40:0.00,-22.75,-455.72 0/0:41:41,0:40:-0.00,-13.38,-174.38 2541 294 . A C . PASS NS=21;AF=0.500 GT:DP:AD:GQ:GL 0/1:46:9,37:40:-94.90,-0.00,-13.32 ./. 0/1:87:19,68:40:-171.80,0.00,-29.78 ./. 0/1:75:13,62:40:-158.14,0.00,-16.12 0/1:69:17,52:40:-131.16,0.00,-29.43 0/1:66:12,54:40:-137.82,0.00,-15.94 0/1:82:14,68:40:-173.30,0.00,-16.89 0/1:55:16,39:40:-97.95,0.00,-30.76 0/1:77:13,64:40:-163.29,0.00,-15.52 ./. ./. ./. ./. ./. 0/1:70:15,55:40:-139.49,0.00,-23.38 ./. ./. 2549 191 . G C . PASS NS=102;AF=0.010 GT:DP:AD:GQ:GL 0/0:133:133,0:40:-0.00,-41.48,-408.93 0/0:75:75,0:40:0.00,-24.04,-231.58 0/0:85:85,0:40:0.00,-27.05,-262.15 0/0:71:71,0:40:0.00,-22.84,-219.34 0/0:149:149,0:40:0.00,-46.29,-457.85 0/0:87:87,0:40:0.00,-27.65,-268.27 0/0:51:50,0:40:0.00,-16.53,-155.13 0/0:93:93,0:40:-0.00,-29.46,-286.62 0/0:86:86,0:40:0.00,-27.35,-265.21 0/0:116:116,0:40:0.00,-36.37,-356.94 0/0:27:27,0:40:-0.00,-9.61,-84.80 0/0:48:47,0:40:-0.00,-15.63,-145.96 0/0:57:57,0:40:-0.00,-18.63,-176.54 ./. 0/0:48:48,0:40:-0.00,-15.93,-149.02 0/0:109:108,0:40:0.00,-33.97,-332.48 ./. 0/0:167:167,0:40:-0.00,-51.70,-512.89 2754 248 . G T . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2764 281 . C A . PASS NS=13;AF=0.385 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2821 296 . A C . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2824 244 . C T . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2824 262 . A G . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2869 234 . A C . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2943 104 . A G . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2943 241 . A C . PASS NS=10;AF=0.400 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2944 205 . A T . PASS NS=87;AF=0.006 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 2944 215 . A T . PASS NS=87;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3323 151 . C A . PASS NS=11;AF=0.364 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3323 164 . C G . PASS NS=10;AF=0.150 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3382 127 . A G . PASS NS=16;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3382 141 . C G . PASS NS=16;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3382 152 . A T . PASS NS=15;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3552 1 . A T . PASS NS=13;AF=0.038 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3564 287 . T G . PASS NS=16;AF=0.469 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3669 206 . C G . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL 0/1:53:14,38:40:-82.87,0.00,-21.94 0/1:89:26,61:40:-130.60,0.00,-41.83 0/1:104:35,69:40:-145.76,0.00,-59.52 0/1:52:18,34:40:-72.74,0.00,-32.07 0/1:74:28,45:40:-94.29,0.00,-51.09 ./. ./. ./. ./. 0/1:70:33,37:40:-74.94,0.00,-64.65 0/1:76:30,45:40:-93.69,0.00,-55.55 0/1:69:29,40:40:-82.83,0.00,-54.82 0/1:76:29,47:40:-98.46,0.00,-52.72 0/1:75:31,42:40:-86.70,0.00,-58.68 0/1:78:27,50:40:-105.75,0.00,-47.36 ./. ./. ./. 3691 29 . A G . PASS NS=15;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3693 80 . G A . PASS NS=12;AF=0.042 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3693 89 . G A . PASS NS=12;AF=0.042 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3693 118 . T C . PASS NS=12;AF=0.042 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3953 1 . A T . PASS NS=27;AF=0.019 GT:DP:AD:GQ:GL ./. ./. 0/0:18:18,0:40:-0.00,-6.58,-81.02 0/0:10:10,0:40:-0.00,-4.17,-46.00 0/1:18:16,2:28:-2.18,-0.00,-65.69 0/0:10:10,0:40:-0.00,-4.17,-46.00 0/0:11:11,0:40:-0.00,-4.47,-50.38 0/0:11:11,0:40:-0.00,-4.47,-50.38 ./. ./. ./. ./. ./. ./. ./. 0/0:12:12,0:40:-0.00,-4.77,-54.75 0/0:73:73,0:40:-0.00,-23.14,-321.77 0/0:31:31,0:40:-0.00,-10.49,-137.92 3953 239 . G T . PASS NS=18;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 3957 75 . A G . PASS NS=23;AF=0.500 GT:DP:AD:GQ:GL ./. ./. 0/1:87:24,63:40:-140.41,0.00,-37.52 0/1:37:12,25:40:-56.31,0.00,-21.23 0/1:72:14,57:40:-129.56,0.00,-16.25 0/1:48:11,37:40:-84.31,0.00,-15.32 0/1:33:8,25:40:-57.51,-0.00,-12.00 0/1:38:6,32:40:-74.27,-0.00,-5.28 0/1:52:14,38:40:-85.71,0.00,-21.95 0/1:40:16,23:40:-50.50,0.00,-31.06 ./. ./. ./. ./. ./. ./. 0/1:172:54,117:40:-256.03,0.00,-90.56 0/1:86:24,61:40:-135.80,0.00,-38.12 4280 61 . T G . PASS NS=10;AF=0.250 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4280 86 . G T . PASS NS=10;AF=0.250 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4280 114 . T C . PASS NS=10;AF=0.250 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4280 149 . T C . PASS NS=10;AF=0.150 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4280 185 . G A . PASS NS=10;AF=0.150 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4280 187 . A C . PASS NS=10;AF=0.150 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4280 261 . C T . PASS NS=10;AF=0.150 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4315 82 . T C . PASS NS=106;AF=0.476 GT:DP:AD:GQ:GL 0/1:87:32,55:40:-143.31,0.00,-73.94 0/1:43:35,7:40:-10.04,-0.00,-96.65 0/1:104:59,45:40:-107.61,0.00,-151.41 0/1:60:35,25:40:-59.68,0.00,-91.24 0/1:56:41,15:40:-30.30,0.00,-110.79 ./. ./. ./. 0/1:59:44,15:40:-29.39,0.00,-119.06 ./. ./. 0/1:51:37,14:40:-28.74,0.00,-100.06 ./. 0/1:40:30,10:40:-19.81,0.00,-81.96 0/1:21:19,2:15:-1.10,-0.04,-54.06 ./. 0/1:70:55,15:40:-26.09,0.00,-149.40 0/1:136:86,49:40:-110.53,0.00,-224.66 4476 185 . G T . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4476 198 . C G . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4476 200 . A G . PASS NS=11;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4560 30 . G A . PASS NS=88;AF=0.483 GT:DP:AD:GQ:GL 0/1:93:61,32:40:-106.07,0.00,-227.19 0/1:48:39,9:40:-24.24,0.00,-149.51 ./. ./. ./. ./. 0/0:122:122,0:40:0.00,-35.35,-506.76 ./. ./. 0/1:170:134,36:40:-99.48,0.00,-506.72 0/1:60:52,8:40:-16.48,0.00,-199.80 0/1:99:79,20:40:-54.50,0.00,-300.03 0/1:46:34,12:40:-37.28,0.00,-129.38 ./. 0/1:51:41,10:40:-27.48,0.00,-156.90 0/1:160:121,39:40:-114.93,0.00,-455.83 ./. ./. 4560 131 . G A . PASS NS=89;AF=0.478 GT:DP:AD:GQ:GL 0/1:93:61,32:40:-87.24,0.00,-191.42 0/1:48:39,9:40:-18.90,0.00,-126.64 ./. ./. ./. ./. 0/0:122:122,0:40:0.00,-35.41,-435.27 ./. ./. 0/1:170:133,36:40:-78.61,0.00,-424.88 0/1:60:52,8:40:-11.73,-0.00,-169.31 0/1:99:79,20:40:-42.71,0.00,-253.69 0/1:46:33,13:40:-33.74,0.00,-105.88 ./. 0/1:51:41,10:40:-21.56,0.00,-132.85 0/1:160:121,39:40:-92.00,0.00,-384.86 ./. ./. 4588 95 . A G . PASS NS=28;AF=0.036 GT:DP:AD:GQ:GL 0/1:86:75,11:40:-11.21,-0.00,-231.70 ./. 0/0:30:30,0:40:-0.00,-9.47,-104.48 0/0:39:39,0:40:-0.00,-12.18,-135.18 0/0:54:54,0:40:0.00,-16.69,-186.36 0/0:67:67,0:40:0.00,-20.60,-230.72 0/0:33:33,0:40:-0.00,-10.37,-114.71 ./. 0/0:24:24,0:40:-0.00,-7.66,-84.01 ./. ./. ./. ./. 0/1:40:32,8:40:-14.82,0.00,-98.83 ./. 0/0:18:18,0:40:-0.00,-5.86,-63.54 0/0:205:205,0:40:0.00,-62.12,-701.56 0/0:77:77,0:40:0.00,-23.61,-264.84 4588 205 . A T . PASS NS=28;AF=0.464 GT:DP:AD:GQ:GL 0/0:86:77,8:40:-0.00,-3.87,-182.13 ./. 0/1:30:22,8:40:-12.63,-0.00,-50.77 0/1:39:27,11:40:-18.08,0.00,-61.46 0/1:54:39,15:40:-23.75,0.00,-88.07 0/1:66:51,15:40:-20.15,0.00,-115.89 0/1:33:26,6:40:-6.79,-0.00,-60.64 ./. 0/1:23:19,4:40:-4.26,-0.00,-45.02 ./. ./. ./. ./. 0/0:40:38,2:40:-0.00,-6.08,-95.74 ./. 0/1:18:14,4:40:-5.76,-0.00,-33.43 0/1:204:163,40:40:-44.50,0.00,-368.00 0/1:77:52,25:40:-43.03,0.00,-115.21 4791 15 . G A . PASS NS=14;AF=0.357 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4792 199 . T A . PASS NS=26;AF=0.462 GT:DP:AD:GQ:GL 0/0:41:39,2:40:-0.00,-5.79,-103.49 ./. 0/1:76:63,13:40:-14.11,-0.00,-153.54 ./. 0/1:95:73,22:40:-33.28,0.00,-175.48 0/1:83:73,10:40:-3.72,-0.00,-179.08 0/1:54:46,8:40:-6.90,-0.00,-113.15 0/0:71:66,5:40:-0.00,-6.50,-169.84 0/1:82:63,19:40:-28.89,0.00,-151.74 0/1:72:63,9:40:-4.25,-0.00,-154.74 ./. ./. ./. ./. ./. 0/1:79:69,10:40:-4.92,-0.00,-169.23 0/1:216:166,48:40:-69.42,0.00,-396.82 0/1:100:88,12:40:-4.14,-0.00,-215.44 4814 70 . T C . PASS NS=91;AF=0.060 GT:DP:AD:GQ:GL 0/0:93:93,0:40:0.00,-28.84,-288.47 0/0:78:78,0:40:0.00,-24.33,-242.30 0/0:97:97,0:40:-0.00,-30.04,-300.78 ./. 0/0:119:119,0:40:-0.00,-36.65,-368.50 ./. ./. ./. ./. 0/0:81:81,0:40:-0.00,-25.23,-251.53 0/0:51:51,0:40:0.00,-16.21,-159.19 0/0:90:89,0:40:0.00,-27.63,-276.15 0/0:63:63,0:40:-0.00,-19.82,-196.12 0/0:52:52,0:40:0.00,-16.51,-162.26 0/0:69:69,0:40:0.00,-21.62,-214.59 0/0:204:204,0:40:0.00,-62.21,-630.14 ./. ./. 4819 233 . T A . PASS NS=11;AF=0.091 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4855 205 . C G . PASS NS=14;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4907 204 . T A . PASS NS=12;AF=0.042 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 4912 260 . T G . PASS NS=24;AF=0.479 GT:DP:AD:GQ:GL ./. ./. ./. 0/1:10:9,1:20:-1.51,-0.01,-29.74 0/1:39:34,5:40:-6.33,-0.00,-105.76 0/1:27:23,4:40:-6.55,-0.00,-72.08 0/1:15:12,3:40:-6.77,-0.00,-38.39 0/1:17:15,2:34:-2.78,-0.00,-47.96 0/1:10:8,2:40:-4.89,-0.00,-26.34 0/1:14:10,4:40:-10.46,-0.00,-31.91 ./. ./. ./. ./. ./. 0/1:13:10,3:40:-7.37,-0.00,-32.21 0/1:21:17,4:40:-8.36,-0.00,-53.54 0/1:34:27,7:40:-14.62,-0.00,-83.53 4977 253 . A C . PASS NS=17;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 5188 140 . C T . PASS NS=10;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 5295 61 . A G . PASS NS=13;AF=0.115 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 5295 70 . T G . PASS NS=14;AF=0.143 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 5295 130 . G A . PASS NS=14;AF=0.143 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 5336 233 . T G . PASS NS=12;AF=0.417 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 5467 270 . T G . PASS NS=11;AF=0.409 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 5522 192 . C A . PASS NS=15;AF=0.400 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 5595 161 . A G . PASS NS=9;AF=0.500 GT:DP:AD:GQ:GL 0/1:92:36,55:40:-122.68,0.00,-71.35 ./. 0/1:20:8,12:40:-28.48,0.00,-17.45 0/1:64:29,35:40:-77.06,0.00,-60.65 0/1:43:19,24:40:-53.81,0.00,-40.09 0/1:60:31,29:40:-62.14,0.00,-67.22 ./. 0/1:104:38,66:40:-148.32,0.00,-72.82 ./. 0/1:70:35,35:40:-75.26,0.00,-74.97 ./. ./. ./. ./. ./. ./. 0/1:110:61,48:40:-98.47,0.00,-133.10 0/1:35:9,26:40:-61.59,0.00,-15.63 5639 135 . C G . PASS NS=12;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 5682 301 . G T . PASS NS=13;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. 5787 15 . C T . PASS NS=12;AF=0.500 GT:DP:AD:GQ:GL ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./. ./.