--- event_model_prior: dirichlet_process: parameters: concentration: value: 0.5 estimate: false event_time_prior: exponential_distribution: rate: 0.2 mcmc_settings: chain_length: 10000 sample_frequency: 50 global_comparison_settings: ploidy: 1 genotypes_are_diploid: false markers_are_dominant: false population_name_delimiter: "-" population_name_is_prefix: false constant_sites_removed: false equal_population_sizes: false parameters: population_size: value: 1 estimate: true prior: gamma_distribution: shape: 2.0 scale: 1 offset: 0.0 root_relative_population_size: value: 1.0 estimate: false freq_1: value: 0.5 estimate: false mutation_rate: value: 0.0104 estimate: false comparisons: - comparison: path: "../N-M/ND2_Mido_NM.nex" - comparison: path: "../N-M/ND2_Midro_NM.nex" - comparison: path: "../N-M/ND2_Mifo_NM.nex" - comparison: path: "../N-M/ND2_Migy_NM.nex" - comparison: path: "../N-M/ND2_Mipa_NM.nex" - comparison: path: "../N-M/ND2_Miso_NM.nex" - comparison: path: "../N-M/ND2_Mitai_NM.nex" - comparison: path: "../N-M/ND2_Mital_NM.nex" - comparison: path: "../N-M/ND2_Orho_NM.nex" - comparison: path: "../N-M/CytB_Elgr_NM.nex" parameters: mutation_rate: value: 0.00624 estimate: false - comparison: path: "../N-M/CytB_Elma_NM.nex" parameters: mutation_rate: value: 0.00624 estimate: false - comparison: path: "../N-M/CytB_Elmi_NM.nex" parameters: mutation_rate: value: 0.00624 estimate: false - comparison: path: "../N-M/CytB_Elta_NM.nex" parameters: mutation_rate: value: 0.00624 estimate: false - comparison: path: "../N-M/CytB_Elwe_NM.nex" parameters: mutation_rate: value: 0.00624 estimate: false - comparison: path: "../N-M/CytB_Gyro_NM.nex" parameters: mutation_rate: value: 0.00624 estimate: false