SemanticSimilarityResults.tsv This file contains semantic similarity results from comparing every gene in the Phenoscape Knowledgebase to every to taxon evolutionary profile. Results valid as of 1-Jul-2015. Format: tab separated file (.tsv) Columns: 'Gene ID': url identifier of the gene 'Gene Name': gene symbol 'Gene Profile Size': number of EQ annotations/phenotypes in the phenotypic profile of the gene. 'Taxon ID': vertebrate taxonomy ontology (VTO) identifier of the taxon. 'Taxon Name': name of the taxon. 'Taxon Evolutionary Profile Size': number of EQ annotations/phenotypes in the evolutionary phenotype profile of the taxon. The evolutionary phenotype profile of a taxon consists of the EQ annotations corresponding to those character states inferred to be variable among daughter lineages at the given taxonomic level. 'Overall Similarity': semantic similarity score for the phenotype profile of a given gene against a given taxon, calculated as the median of the set of normalized IC scores from the top match of each gene EQ annotation versus each taxon EQ annotation. Normalized IS scores range from 0 to 1. 'Expect Value': the number of evolutionary taxon profiles one would expect to see for a given gene profile with the same Overall Similarity or higher. Values range from 0 to 659 (the number of taxon evolutionary profiles). Inquiries: Prashanti Manda, http://orcid.org/0000-0002-7162-7770