This README file was generated on 2021-06-16 by Tatsuro Tanioka GENERAL INFORMATION 1. Title of Dataset: Model Output for MOPS-ECCO Runs used in Tanioka et al. (2021), submitted 2. Author Information A. Principal Investigator Contact Information Name: Katsumi Matsumoto Institution: University of Minnesota Address: Department of Earth & Environmental Sciences, University of Minnesota Email: katsumi@umn.edu B. Alternate Contact Information Name: Tatsuro Tanioka Institution: University of Minnesota (now at University of California, Irvine) Address: Department of Earth & Environmental Sciences, University of Minnesota Email: tanio003@umn.edu, tatsurt@uci.edu 3. Date of data collection (single date, range, approximate date) : 2020-12-04 4. Geographic location of data collection : Computational simulation at Minnesota Supercomputing Institute, University of Minnesota, MN, USA 5. Information about funding sources that supported the collection of the data: National Science Foundation (grant no. OCE-1827948) SHARING/ACCESS INFORMATION 1. Licenses/restrictions placed on the data: N/A 2. Links to publications that cite or use the data: TBA 3. Links to other publicly accessible locations of the data: N/A 4. Links/relationships to ancillary data sets: N/A 5. Was data derived from another source? no 6. Recommended citation for this dataset: Tanioka, Tatsuro; Matsumoto, Katsumi (2021), Model Output for MOPS-ECCO Runs used in Tanioka et al. (2021), submitted, Dryad, Dataset, https://doi.org/10.5061/dryad.70rxwdbxq DATA & FILE OVERVIEW 1. File List: 1. Directory: "Runs_archived.tar.gz" contains run directories (201204{d,h,j,p,q,r}). See DATA-SPECIFIC INFORMATION below for more details. 2. "inputs_ECCO_archive.tar.gz" contains monthly-mean TMM forcing fields as well as initial tracer concentration files following the 3000-year spin-up run. See DATA-SPECIFIC INFORMATION below for more details. 2. Relationship between files, if important: Same input fields from "inputs_ECCO_archive.tar.gz" are used in all the sensitivity runs. 3. Additional related data collected that was not included in the current data package: N/A 4. Are there multiple versions of the dataset? no METHODOLOGICAL INFORMATION 1. Description of methods used for collection/generation of data: General information on TMM method: https://github.com/samarkhatiwala/tmm If you use the TMM, please cite Khatiwala et al. (2005; https://doi.org/10.1016/j.ocemod.2004.04.002) and Khatiwala (2007; https://doi.org/10.1029/2007GB002923). Furthermore, if you use this code please also cite Khatiwala (2018; https://doi.org/10.5281/zenodo.1246300). For Biogeochemical model MOPS see Kriest et al (2015; https://doi.org/10.5194/gmd-8-2929-2015) and Kriest et al. (2020; https://doi.org/10.5194/bg-17-3057-2020) 2. Methods for processing the data: Binary output data are converted to netcdf files using custom MATLAB codes available in Zenodo (10.5281/zenodo.4960404) 3. Instrument- or software-specific information needed to interpret the data: Ferret program (NOAA) was used to analyze netcdf files. Contact T. Tanioka (tanio003@umn.edu) to request ferret scripts. 4. Standards and calibration information, if appropriate: N/A 5. Environmental/experimental conditions: N/A 6. Describe any quality-assurance procedures performed on the data: N/A 7. People involved with sample collection, processing, analysis and/or submission: Tatsuro Tanioka and Katsumi Matsumoto DATA-SPECIFIC INFORMATION FOR: Runs_archived.tar.gz (201204{d,h,j,p,q,r}) contains the following files: 1. biogem_params.txt = list of input parameters changed in sensitivity runs. see Supplementary Table to see which parameters are modified in each sensitivity run. 2. co2airseaflux.nc = surface CO2 air-sea flux file. CO2 is in ppm and CO2 air-sea flux is in [mmolC m2 timestep] (positive flux means CO2 is going into the sea from the air). 3. fields_fluxes.nc = Flux and other derived files. Outputs are: PHOTO = Primary Production in Each Box [mmol P/m3/timestep] GRAZE = Zooplankton grazing in Each Box [mmol P/m3/timestep] SEDIMENT = Detritus (POP) sedimentation through upper boundary of box [mmol P/m2/timestep] REMIN = Remineralization of detritus and DOP in each box [mmol P/m3/timestep] RUNOFF = River runoff [mmol P/m3/timestep] NFIX = Nitrogen Fixation [mmol N/m3/timestep] DENIT = Denitrification [mmol N/m3/timestep] PAR = Photosynthetic Active Radiation [W/m2] SEDIMENT_C = Detritus carbon (POC) sedimentation through upper boundary of box [mmolC/m2/timestep] CP_PHYTO_UPTAKE = C:P uptake ratio of phytoplankton [mol C:mol P] CP_ZOO_UPTAKE = C:P uptake ratio of zooplankton [mol C:mol P] 4. fields_tracers_avg.nc = monthly-averaged tracer files in the last year of simulation (year 3999). State-variables are: PO4 = Phosphate [mmol P/m3] DOP = Dissolved Organic Phosphorus [mmol P/m3] OXYGEN = Dissolved O2 [mmol O2/m3] PHYTO = Phytoplankton biomass in P [mmol P/m3] ZOO = Zooplankton biomass in P [mmol P/m3] DET = Detritus in P (POP) [mmol P/m3] NO3 = Nitrate [mmol N/m3] DIC = Dissolved Inorganic Carbon [mmol C/m3] ALK = Alkalinity [mmol C/m3] POC = Detritus in C (POC) [mmol C/m3] DOC = Dissolved Organic Carbon [mmol C/m3] PHYTOC = Phytoplankton biomass in C [mmol C/m3] ZOOC = Zooplankton biomass in C [mmol C/m3] 5. fields_tracers_snapshot.nc = snapshot racer files every 100 years from year 3000 - 4000. State-variables are identical to that of fields_tracers_avg.nc. 6. fields_TS.nc = Monthly mean temperature and salinity files. TEMP = Potential Temperature [Deg C] SALT = Salinity [psu] TEMP_MEAN = Annual Mean Temperature [Deg C] SALT_MEAN = Annual Mean Salinitu [psu] 7. pCO2.nc = pCO2 (in ppm) timeseries snapshot file every 100 years from year 3000 to DATA-SPECIFIC INFORMATION FOR: inputs_ECCO_archive.tar.gz. Binary files included are: Ae_xx : Monthly explicit transport matrices (TMs) [1/s] Ai_xx : Monthly implicit TMS [unitless] atmosp_xx : Monthly atmospheric pressure [bars] EmP_xx: Monthly E - P field fice_xx : Monthly ice fraction field Ss_xx : Monthly salinity field Ts_xx : Monthly temperature field wind_xx : Monthly wind field alkini.petsc : alkalinity after 3000 year of spin-up = input for continuous run detini.petsc : detritus P (POP) after 3000 year of spin-up dicini.petsc : DIC after 3000 year of spin-up docini.petsc : OOC after 3000 year of spin-up dopini.petsc : DOP after 3000 year of spin-up no3ini.petsc : NO3 after 3000 year of spin-up oxyini.petsc : O2 after 3000 year of spin-up phycini.petsc : phytoplankton C after 3000 year of spin-up phyini.petsc : phytoplankton after 3000 year of spin-up po4ini.petsc : PO4 after 3000 year of spin-up pocini.petsc : POC after 3000 year of spin-up zoocini.petsc : zooplankton c after 3000 year of spin-up zooini.petsc : zooplankton after 3000 year of spin-up Other .petsc and .bin files are specific configuration files for MOPS-ECCO and are automatically generated when following default steps. See README in https://github.com/samarkhatiwala/tmm.