#Nexus begin taxa; TITLE Taxa; dimensions ntax=68; taxlabels Chlorella_variabilis_NC64A Chlamydomonas_moewusii_SAG11_16f Tetrabaena_socialis_N571 Basichlamys_sacculifera_NIES566 Volvox_aureus_NIES541 Pleodorina_japonica_UTEX2523 Volvox_dissipatrix_NIES4128 Volvox_africanus_NIES863 Volvox_ovalis_NIES2569 Volvox_tertius_NIES544 Volvox_obversus_NIES868 Volvox_carteri_weismannia_NIES866 Volvox_carteri_nagariensis_HK10 Volvox_carteri_nagariensis_NIES865 Volvox_carteri_kawasakiensis_NIES732 Eudorina_elegans_NIES719 Eudorina_elegans_NIES720 Eudorina_minodii_NIES856 Eudorina_elegans_NIES456 Pleodorina_thompsonii_NIES4126 Pleodorina_starrii_NIES1363 Pleodorina_starrii_NIES1362 Pleodorina_indica_NIES736 Eudorina_elegans_NIES568 Eudorina_elegans_FACHB2321 Eudorina_elegans_NIES458 Volvox_powersii_NIES4127 Volvox_gigas_NIES867 Eudorina_cylindrica_NIES722 Eudorina_illinoisensis_NIES460 Eudorina_elegans_NIES717 Eudorina_cylindrica_FACHB2322 Eudorina_unicocca_SAG24_1c Eudorina_peripheralis_NIES725 Vitreochlamys_aulata_NIES878 Vitreochlamys_aulata_SAG80_81 Volvulina_steinii_SAG90_1 Pandorina_morum_NIES890 Pandorina_morum_FACHB2362 Volvulina_boldii_NIES893 Volvulina_compacta_NIES582 Volvulina_pringsheimii_NIES895 Volvulina_compacta_FACHB2337 Gonium_multicoccum_NIES737 Gonium_octonarium_NIES851 Gonium_viridistellatum_NIES654 Gonium_Pectorale_NIES2863 Gonium_quadratum_NIES653 Yamagishiella_unicocca_FACHB2364 Astrephomene_perforata_NIES564 Astrephomene_gubernaculifera_NIES418 Volvox_globator_SAG_199_80 Volvox_barberi_NIES730 Volvox_ferrisii_NIES3986 Volvox_kirkiorum_NIES_543 Pandorina_colemaniae_NIES572 Pandorina_colemaniae_FACHB2361 Colemanosphaera_angeleri_FACHB2363 Colemanosphaera_charkowiensis_NIES3383 Colemanosphaera_charkowiensis_FACHB2326 Platydorina_caudata_NIES728 Chlamydomonas_debaryana_SAG11_55a Chlamydomonas_globosa_SAG81_72 Chlamydomonas_schloesseri_SAG2486 Chlamydomonas_reinhardtii_CC503 Chlamydomonas_debaryana_SAG70_81 Vitreochlamys_ordinata_NIES882 Vitreochlamys_nekrassovii_SAG11_10 ; end; BEGIN CHARACTERS; TITLE gene002381; LINK TAXA = Taxa; DIMENSIONS NTAX=68 NCHAR=222; FORMAT DATATYPE=PROTEIN GAP=- MISSING=?; MATRIX Chlorella_variabilis_NC64A SVLLPTYNERENIGIIVALLVKTFEYEIVIIDDNSPDGTQEVVRLQTAYSSDKIVLRTRPGKLGLGTAYVYGLKHATGDFVVVMDADLSHHPKYIPEFIAKQAERDADIVSGTRYAREGGISGWDFRRKLTSCGANILAATLLQPSDLTGSFRLYRKSVLTELVKDCGSRGYAFQMEMMVRARNLGATIDEVPIVFVDRLYGDSKLGGAEIWMFLKGLLWLL Chlamydomonas_moewusii_SAG11_16f SIIVPTYNEAENVPLLLWLLNKHIPWEVIVVDDASPDGTADVARLASAWPQLVLRVLRRPHKSGLGSAYRHGLQHARGELVLLLDADLSHHPKYIPRFLQQQSQTGCDIVTGTRYQQGGGVAGWSLRRKLVSRGANLIASFLLGASDLTGAFRLYKREVLQRLLAVTTSAGYAFQMEVIVRAQYEGCSIREVPIVFVDRIYGSSKLGPSEFYLFLKGLLKLL Vitreochlamys_nekrassovii_SAG11_10 SVVVPTYNERENIAVLTFLLLKALAFELIVVDDASPDGTQDVVQLQHAYDQLDIKLVARPGKLGLGTAYAAGVAVSSGDFIVLMDADLSHLPAYLPAFLEKQRSTGADIVTGTRYVPGGGVSGWDWRRKLTSRGANLLARFLLQASDLTGSFRMYKRGALTALLNSTRSRGYAFQMEVIVRAQYEGFSIAEVPIVFVDRLYGQSKLGASEYMLFVRGLLRLL Tetrabaena_socialis_N571 SIILPTFNERDNVPVLLWLLLGALDFEAVFVDDASPDGTADAVALQAAFGSHLVRLVSRPRKLGLGSAYAAGLAASRGRFIVLMDADLSHHPRHLPAFIAAQRATGADIVAGTRYAAGGGVAGWSLRRKLTSRGANLLASFVLGASDLTGAYRLYKRDALACLLGRCTSRGYAFQMEVIVRAQYGGFRIAEVPIVFVDRLYGASKLGAGEYVQFVRGLLGLL Basichlamys_sacculifera_NIES566 SIILPTFNERDNVAVLLWLLLKSLAFEAVFVDDASPDGTADAVALQAAFGARLVRLVCRPRKLGLGSAYAAGLAASRGRFIVLMDADLSHHPRHLPAFIATQRATRAAIVSGTRYAPGGGVAGWSLRRKLTSRGANLLASFLLGATDLTGAYRLYERGVLAQLLRSCTSRGYAFQMEVIVRAQYGGFRVAEVPIVFVDRLYGSSKLGAGEYVQFARGLLGLL Vitreochlamys_ordinata_NIES882 SIIVPTYNERDNVGVLTWLLRRALASEVVFVDDASPDGTADAVALQPAFDSPAVRLVCRPAKLGLGTAYAAGLAASRGALVVLMDGDLSHNPKHIPELLAVQRGTSADVVSGTRYTRGGGVAGWNLRRKLTSRGANLLASFLLGATDLTGAFRLYRREALVALLAATTSRGYAFQMEVIVRAQYDGMRIEEVPIVFVDRLYGKSKLGAGEYVQFVRGLAGLL Volvox_aureus_NIES541 SVIVPTYNERQNVAILVYLLHKYLAFEIIFVDDNSPDGTADAVQIKPLY--PRVHLVRRPKRAGLGSAYQHGVAKALGSFIILMDADLSHHPRHLPVFIEQQRKTGADIVTSTRYQAGGGVAGWNLLRKFTSRGANLLASFLLGASDLTGSYRLYQHEALGKLLAATASQGYAFQMEVIIRAQYAGMRLVEVPIVFVDRIYGNSKLGWGEYLQFIRGLLRLL Pleodorina_thompsonii_NIES4126 SILVPTYNERPNVAILVWLLHKYLTFEVIFIDDSSPDGTAAAVALQAAYGPTAVRLVVRPRKLGLGSAYASGLAASRGRLVALMDADLSHHPRHLPAFLAVQRAADADVVSGTRYRAGGGVAGWSLTRKLTSRGANLLASFLLGSSDLTGAFRLYRREALAALLAATASRGYAFQMEVVVRAQYGGLRIAEVPIVFVDRLYGDSKLGLGEYVQFVRGLLGLI Pleodorina_japonica_UTEX2523 SVIVPTYNEHQNVAVLVYLLHKYLAFEIIFVDDNSPDGTADAVLLQAVYGDAHVRIVSRPGKLGLGSAYAAGLAAASSAFAILMDADLSHHPKHLPDFIAAQRAAGADIVAGTRYSLGGGVAGWNLMRKITSRGANLLASFLLGASDLTGAFRLYRREALAQLLAATSSCGYAFQMEVIVRAQYSGMRLAEVPIVFVDRLYGKSKLGVGEYVLFVRGLLGLL Eudorina_cylindrica_NIES722 SIIVPTYNERENVAILVWMLHTYLTFEVIFVDDASPDGTADVVRLQAAYSAAAVRLVTRPGKLGLGSAYAAGLAASSAPFIILMDADLSHHPRHLPAFIAAQRAADADVVSGTRYRLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAFRLYRREALEALLNRTRSVGYAFQMEVIVRAQYDRLRIAEVPIVFVDRLYGESKLGVGEYVQFVRGLLGLL Eudorina_cylindrica_FACHB2322 SIIVPTYNERENVAILVWMLHTYLTFEVIFVDDASPDGTADVVRLQAAYSAAAVRLVTRPGKLGLGSAYAAGLAASSAPFIILMDADLSHHPRHLPAFIAAQRAANADVVSGTRYRLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAFRLYRREALEALLSRTRSVGYAFQMEVIVRAQYDRLRIAEVPIVFVDRLYGESKLGVGEYVQFVRGLLGLL Eudorina_illinoisensis_NIES460 SIIVPTYNERENVAILVWMLHTYLTFEVIFVDDASPDGTADVIRLQAAYSAAAVRLVTRPGKLGLGSAYAAGLAASSAPFIILMDADLSHHPRHLPAFIAAQRAADADVVSGTRYHLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAFRLYRREALEALLTRTRSVGYAFQMEVIVRAQYDRLRIAEVPIVFVDRLYGESKLGVREYVQFVRGLLGLL Eudorina_elegans_NIES717 SIIVPTYNERENVAILVWMLHTYLTFEVIFVDDASPDGTADVIRLQAAYSAAAVRLVTRPGKLGLGSAYAAGLAASSAPFIILMDADLSHHPRHLPAFIAAQRAADADVVSGTRYRLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAFRLYRREALEALLTRTRSVGYAFQMEVIVRAQYDRLRIAEVPIVFVDRLYGESKLGVREYVQFVRGLLGLL Eudorina_elegans_NIES719 SIIVPTFNERKNVAVLTWFLHKYLAFEVVFVDDNSPDGTAAAVQLQAVYGTATVRLVSRPGKLGLGSAYAAGLAASSGRFIILMDADLSHHPKHLPDFIAAQRAANADIVAGTRYRLGGGVAGWNLVRKLTSRGANLLASFLLGASDLTGAFRLYRREVLSGLLAATVSRGYAFQMEVLVRAQYGGFRIVEVPIVFVDRLYGESKLGVGEYVQFVRGLGSLL Eudorina_elegans_NIES720 SIIVPTFNERENVAVLTWLLHKYLSFEVVFVDDNSPDGTAAAVQLQAVYGSAAVRLVSRPGKLGLGSAYAAGLAACCGRLVILMDADLSHHPKHLPDFIAAQRAANADIVAGTRYRLGGGVAGWNLGRKLTSRGANLLASFLLGASDLTGAFRLYRREVLAGLLAATASRGYAFQMEVLVRAQYGGFRIVEVPIVFVDRLYGESKLGVGEYVQFVRGLGTLL Eudorina_minodii_NIES856 SIIVPTYNERENVAVLTWLIHKYLAFEVVFVDDNSPDGTAAAVQLQAVYGTARVRLVSRPGKLGLGSAYASGLAASSGRFIILLDADLSHHPKHLPAFIAAQRAADADIVAGTRYCQGGGVAGWNLVRKLTSRGANLLASFLLGASDLTGAFRLYRRDALAGLLAATVSRGYAFQMEVLVRAQYAGLRIVEVPIVFVDRLYGESKLGVGEYVQFVRGLLTLL Eudorina_elegans_NIES456 SIIVPTFNERDNVSVLTWLLHKYLAFEVVFVDDNSPDGTADAVQLQAVYGPARVRLVSRPGKLGLGSAYAFGLAVAVGRFVILMDADLSHHPKHLPAFIAAQRVADADVVAGTRYCLGGGVAGWNLVRKLTSRGANLLASFLLGASDLTGAFRLYRRDALAGLLAATVSRGYAFQMEVLVRAQYGGLRIVEVPIVFVDRLYGESKLGVGEYVQFVRGLVTLL Eudorina_unicocca_SAG24_1c ????????????????VWMLHKHLTFEIIFVDDASPDGTADAVRLQTVYGTSAVRLVTRSSKLGLGTAYATGLAASTGRFIILMDADLSHHPRHLPAFITAQRATDADVVAGTRYRAGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAFRLYRRDALAGLLPATRSRGYAFQMEVIVRAQYGGLRITEVPIVFVDRLYGESKLGVGEYVQFV??????? Eudorina_peripheralis_NIES725 SVIVPTYNERENVAVLVWMLHKHLAFEVVFVDDASPDGTADAVRLQAVYGTSAVRLVTRSAKLGLGSAYASGLAASTGRFVILMDADLSHHPRHLPDFIAAQRAADADVVAGTRYRAGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAFRLYRREALAALLPATRSRGYAFQMEVIVRAQYGGLRITEVPIVFVDRLYGESKLGVGEYVQFVR?????? Eudorina_elegans_NIES568 SIIVPTYNERENVAILVWLLHKYLAFEVIFVDDASPDGTADAVALQPAFATAPIHLVTRPAKLGLGSAYAAGLAAASGAFIILMDADLSHHPRHLPAFIAAQRAARADVVAGTRYRLGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAFRLYRREPLARLLAATRSRGYAFQMEVLVRAQYGGLAIVEVPIVFVDRLYGSSKLGVGEYVQFLQGLLGLL Eudorina_elegans_FACHB2321 SIIVPTYDERENVAILVWLLHKYLAYEVIFVDDASPDGTADAVALQTRFASAPIHLVTRPAKLGLGSAYAAGLAAASGAFIILMDADLSHHPRHLPAFIAAQRQLGADVVAGTRYRLGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAFRLYRRQPLAALLAATRSRGYAFQMEVLVRAQYGGLRIAEVPIVFVDRLYGSSKLGVGEYVQFLRGLVGLL Eudorina_elegans_NIES458 ???????????????????????LAYEVIFVDDASPDGTADAVALQTAFAAAPIHLVTRPAKLGLGSAYAAGLAAASGAFIILMDADLSHHPRHLPAFIAAQRQHGADVVAGTRYRLGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAFRLYRRQPLTALLAATRSRGYAFQMEVLVRAQYGGLRIAEVPIVFVDRLYGSSKLGVGEYVQFLRGLVGLL Pleodorina_indica_NIES736 SIIVPTYNERENVAILFWMLRKHLAFEVVFVDDASPDGTAAAVSLQAIYGPSLVRLVTRPAKLGLGSAYAAGLAAASGAFVILMDADLSHHPRHLPAFIAKQRATGADVVAGTRYRASGGVAGWNLARKLTSRGANLLASFLLGASDLTGAYRLYRRETLTALLAATRSRGYAFQMEVIVRAQYDGLRIAEVPIVFVDRLYGESKLGVGEYVQFVRGLVGLL Pleodorina_starrii_NIES1363 SIIVPTYNERENVAILVWLLHKYLAFEVVFVDDASPDGTAAAVRLQTVYGPTRVRLVTRPAKLGLGSAYAAGLAAASGAFIILMDADLSHHPRHLPAFIATQRAADADVVAGTRYRAGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAYRLYRREVLAALLAATRSRGYAFQMEVIVRAQYGGLRIAEVPIVFVDRLYGESKLGLGEYVQFVR?????? Pleodorina_starrii_NIES1362 SIIVPTYNERENVAILVWLLHKYLAFEVVFVDDASPDGTAAAVRLQTVYGPTRVRLVTRPAKLGLGSAYAAGLAAASGAFIILMDADLSHHPRHLPAFIATQRAADADVVAGTRYRAGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAYRLYRREVLAALLAATRSRGYAFQMEVIVRAQYGGLRIAEVPIVFVDRLYGESKLGLGEYVQFVRGLLGLL Volvox_powersii_NIES4127 SVIVPTYNERENVAVLVCMLHKYLAFEVVFVDDASPDGTAEAVALQAVYGTTTVRLVSRPSKLGLGSAYAAGLAAASGAFIILMDADLSHHPRYLPAFVAAQRASGADIVAGTRYHLGGGVAGWNLARKLTSRGANLLACFLLGASDLTGAFRLYRREALARLLPSTRSRGYAFQMEILVRAQYGGLRIAEVPIVFVDRLYGESKLGVGEY??????????? Volvox_gigas_NIES867 SIIVPTYNERENVAVLVWMLHKYLAFEVVFVDDASPDGTAEAVALQAVYGTTTVRLVSRPGKLGLGTAYAAGLAAASGAFIILMDADLSHHPRHLPAFVAAQRASDADVVAGTRYRLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAFRMYRREALVRLLPATRSRGYAFQMEVLVRAQYGG???????????????????????????????????? Volvox_obversus_NIES868 SVIVPTYNERPNVAVLLWLLHNYLVFEVVFVDDNSPDGTADAVQLQAVYGTSRVRLVRRLSKLGLGTAYAAGLAASAGRFIILMDADLSHHPKHLPAFIATQRTVGADIVAGTRYGLGGGVAGWNLARKLTSRGANLLASFLLCASDLTGAFRLYRRDTLAELLHVTSSRGYAFQMEVIVRAQYSGLRIAEVPIVFVDRLYGESKLGLGEYVQFVQGLLGLL Volvox_carteri_weismannia_NIES866 SVIVPTYNERPNVAVLAWLLHKYLAFEVVFVDDNSPDGTADAVQLQEVYGTSRVRLVCRPGKLGLGTAYAAGLATSSGRFIILMDADLSHHPKHLPDFIAVQRATDADVVAGTRYRLGGGVAGWNLTRKITSRGANILASFLLGASDLTGAFRLYRRSALCELLHATTSRGYAFQMEVIVRAQYSRLRITEVPIVFVDRLYGESKLGMGEYVQFVRGLLGLL Volvox_carteri_kawasakiensis_NIES732 SVIVPTYNERPNVAVLAWLLHKYLAFEVVFVDDNSPDGTANAVQLQAVYGTSRVRLVCRPGKLGLGTAYAAGLAASSGPFVILMDADLSHHPKHLPDFIAKQRATNADVVAGTRYRLGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAFRLYRRGALCELLHATTSRGYAFQMEVIVRAQYSRLNITEVPIVFVDRLYGESKLGIGEYVQFVRGLLGLL Volvox_carteri_nagariensis_HK10 SVIVPTYNERPNVAVLAWLLHKYLDFEVVFVDDNSPDGTANAIQLQAVYGTSRIRLVCRPGKLGLGTAYAAGLAASSGRFIILMDADLSHHPKHLPDFIAAQRATDADVVAGTRYRLGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAYRLYRRGALCELLHATTSRGYAFQMEVIVRAQYSRLRITEMPIVFVDRLYGESKLGMGEYVQFVRGLLGLL Volvox_carteri_nagariensis_NIES865 SVIVPTYNERPNVAVLAWLLHKYLDFEVVFVDDNSPDGTANAIQLQAVYGTSRIRLVCRPGKLGLGTAYAAGLAASSGRFIILMDADLSHHPKHLPDFIAAQRATDADVVAGTRYRLGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAYRLYRRGALCELLHATTSRGYAFQMEVIVRAQYSRLRITEMPIVFVDRLYGESKLGMGEYVQFVRGLLGLL Volvox_dissipatrix_NIES4128 SVIVPTFNERQNVAVLVWLLHKYLSFEIVFVDDSSPDGTADVIQLQSVYGTSRVLLVRRSAKLGLGSAYASGLAASSGRFIFLMDADLSHHPKHLPAFIEAQRAAHADVVAGTRYRHGGGVAGWNLARKFTSRGANLLASFLLGASDLTGAFRLYRREVLADLLSHTTSRGYAFQMEVIVRAQYSGLRITEVPIVFVDRLYGESKLGVGEYVQFIGGLLGLL Volvox_africanus_NIES863 SVIVPTFNERENVAVLVWLLHKYLSFEIVFVDDSSPDGTADAIQLQPVYGTSRVRLVRRPRKLGLGSAYSVGLAASSGRFIILMDADLSHHPKHLPAFIAAQHAANADIVTGTRYRLGGGVAGWNLTRKITSRGANLLASFLLGASDLTGAFRLYRRQALAELLANTTSRGYAFQMEVIVRAQYGGLQIVEVPIVFVDQLYGESKLGVGEYVQFVHGLLGLL Volvox_ovalis_NIES2569 SVIIPTFNERRNVAVLVCLLHKYLYFEIVFVDDSSPDGTAAAIELQSVYGTSRVRLVRRSGKLGLGSAYADGLAISSGRFIILMDADLSHHPKHLPAFIAAQHAANADIVTGTRYHLGGGVSGWNLARKLTSRGANLLASFLLGASDLTGAYRLYRREALTELLSYTTSRGYAFQMEVIIRAQYSGLHIVEVPIVFVDRLFGESKLGVGEYVQFVRGLLRLL Volvox_tertius_NIES544 SVIVPTFNERQNVAILVCLLHKYLSFEIVFVDDSSPDGTVGAIELQSVYGTSRVRLIHRPDKLGLGSAYAAGVAISSGRFIVLMDADLSHHPKHLPAFIAAQRAANADIVTGTRYRLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAYRLYRREALAELLSYTTSRGYAFQMEVILRAQYSGLRIIEVPIVFVDRLFGESKLGVGEYVQFVRGLLRLL Vitreochlamys_aulata_NIES878 SVILPTYNERENVAVLVLMLHKHLTFEVIFVDDNSPDGTAEEVQLARVYGEARIRLVTRPGKLGLGSAYSDGLKAASGDLIVLMDADLSHHPKHLPAFLEMQQRTSADVVSGTRYCLGGGVAGWSLSRKITSRGANLLASFLLGASDLTGAYRLYRREALEALLLRTKSKGYAFQMEVIVRAQYMGMHIEEVPIVFVDRLYGTSKLGVGEYVQFVRGLLRLM Vitreochlamys_aulata_SAG80_81 SVILPTYNERENVAVLVLMLHKHLTFEVIFVDDNSPDGTAEEVQLARVYGEARIRLVTRPGKLGLGSAYSDGLKAASGDLIVLMDADLSHHPKHLPAFLEMQQRTSADVVSGTRYCLGGGVAGWSLSRKITSRGANLLASFLLGASDLTGAYRLYRREALEALLLRTKSKGYAFQMEVIVRAQYMGMHIEEVPIVFVDRLYGTSKLGVGEYVQFVRGLLRLM Pandorina_morum_NIES890 SIIVPTYNERENIAVLVWMLHNALAFEVVFVDDNSPDGTANAVQLQVVFGSSSIRLVTRADKQGLGSAYAAGLKKARGQFIVLMDADLSHHPKHLPAFISAQRAQNADVVSGTRYCLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAFRLYRREALAGLLAHTTSRGYAFQMEIIVRAQYSGLRIVEVPIVFVDRLFGESKLGVGEYVQFVSGLLCLL Pandorina_morum_FACHB2362 SIIVPTYNERENIAVLVWMLHNALAFEVVFVDDNSPDGTANAVQLQVVFGSSSIRLVTRADKQGLGSAYAAGLKKARGQFIVLMDADLSHHPKHLPAFISAQRAQNADVVSGTRYCLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAFRLYRREALAGLLAHTTSRGYAFQMEIIVRAQYSGLRIVEVPIVFVDRLFGESKLGVGEYVQFVSGLLCLL Volvox_globator_SAG_199_80 SVIVPTYNERDNVAVLVCLLHKIMSFEIIFVDDSSPDGTADVIQLQAAYTHSRITLIIRPAKLGLGSAYASGLAASSGRFIVLMDADLSHHPKHLPAFITAQRATNADVVSSTRYRLGGGVAGWNLARKLTSRGANLLASFILGASDLTGAYRLYRREVLTMLLAASTSRGYAFQMEVIVRAQYSGAIITEVPIVFVDRLYGKSKLGVGEYVQFLRGLVRLL Volvox_barberi_NIES730 SIIVPTYNERENVAVLVYLLHKTLLFEIIFVDDNSPDGTADVIQLQAAYAHSRISLISRPRKLGLGSAYASGLAASSGSFIVLMDADLSHHPKHLPTFIAAQHATNADVVSGTRYRLGGGVAGWNLARKLTSRGANLLASFILGASDLTGAYRLYRRKTLATLLAATTSRGYAFQMEVIVRAQYSGAIITEVPIVFVDRLYGKSKLGVGEYVQFLRGLMRLL Volvox_ferrisii_NIES3986 SIIVPTYNERENVAVLVCLLHKTLSFEIIFVDDNSPDGTADVIQLQAAYAHSRISLISRPRKLGLGSAYASGLAASSGSFIVLMDADLSHHPKHLPAFIAAQRAHKADVVSGTRYQLGGGVAGWNLARKLTSRGANLLASFILGASDLTGAYRLYRREVLAMLLGATTSRGYAFQMEVIVRAQYSGAVIAEVPIVFVDRLYGKSKLGVGEYVQFLRGLVRLL Volvox_kirkiorum_NIES_543 SIIVPTYNERENVAVLVFLLHKILSFEVIFVDDNSPDGTADVIQLQAAYAHSRISLISRPRKLGLGSAYASGLVASSGSFIVLMDADLSHHPKHLPSFIAAQRANNADVVSGTRYRLGGGVAGWNLARKLTSRGANLLASFILGASDLTGAYRLYRREVLAMLLGATISRGYAFQMEVIVRAQYSGAVIAEVPIVFVDRLYGTSKLGVGEYVQFLRGLVRLL Pandorina_colemaniae_NIES572 SIIVPTYNERDNVSILAWLIFKALAFEIVFVDDNSPDGTADAIQLQQAYSSHRVRLVTRPGKLGLGSAYAAGLATASGRFITLMDADLSHHPKHLPFFIAAQRATNADIVTGTRYRLGGGVAGWNLARKLTSRGANLLASFILGASDLTGAYRLYRREALATLLDATASRGYAFQMEVIVRAQYNGMRIEEVPIVFVDRLYGESKLGVGEYVQFVRGLVTLL Pandorina_colemaniae_FACHB2361 SIIVPTYNERDNVSILAWLIVKALAFEIVFVDDNSPDGTADAIQLQQAYSSHRVRLVTRPGKLGLGSAYAAGLATASGRFITLMDADLSHHPKHLPFFIAAQRATNADIVTGTRYRLGGGVAGWNLARKLTSRGANLLASFILGASDLTGAYRLYRREALATLLDATASRGYAFQMEVIVRAQYNGMRIEEVPIVFV????????????????????????? Chlamydomonas_debaryana_SAG11_55a SVIVPTYNERENVAVLTWMLHKVLAYEIIFVDDASPDGTATAVQLQDAFGADCVKLVSRPGKLGLGSAYTAGLAAASGELVVLMDADLSHHPKHLPAMLAALRDSGADIVSGTRYRLGGGVAGWNLRRKLTSRGANLLASFLLGASDLTGAYRLYRRQALAALLQRTASVGYAFQMEIIVRAQYMGYRIAEVPIVFVDRLYGTSKLGVGEYVQFVKGLARLL Gonium_multicoccum_NIES737 SIIVPTYNERDNVAVLLWMMHKTLVFEVVFVDDNSPDGTANAVQLQKAYGSDLVRLVSRPGKLGLGSAYGEGLREASGQFIILMDADLSHHPKHLPAFIETQRASNADVVTGTRYRLGGGVAGWNLVRKLTSCGANLLASFVLGASDLTGAYRLYRREVLAELLSKTTSRGYAFQMEVIVRAQYSGRRIVEVPIVFVDRLYGTSKLGVGEYVQFVRGLLRLL Yamagishiella_unicocca_FACHB2364 SIIVPTYNERENVAVLVWMLHKSLLFEVVFVDDSSPDGTADAVQLQAVYGSSRVRLVSRPGKMGLGSAYASGLLEASGRFIILMDADLSHHPKHLPAFIAEQRASNADVVSGTRYRLGGGVAGWNLTRKLTSRGANLLATFLLGASDLTGAYRLYRRGVLAALLPRTVSRGYAFQMEVIVRAQYMGFRISEVPIVFVDRLYGESKLGVGEYVQFVRGLWGLL Gonium_octonarium_NIES851 SIVVPTYNERENVAVLVWMLHKALAFEVVFVDDSSPDGTADVVQLQAAYGSDRVRLVSRPGKQGLGSAYAAGLREAVGEYIILMDADLSHHPKHLPAFIAKQRATNADIVTGTRYRLGGGVAGWNLARKLTSRGANLLASFILGASDLTGAYRLYRRDVLMELLAQTTSRGYAFQMEVIVRAQYARRRIEEVPIVFVDRLYGTSKLGVGEYVQFARGLVRLL Gonium_Pectorale_NIES2863 SIIVPTYNERENVGALLWILRAELAYEVVFVDDNSPDGTADAVELQAAFGPELVHLVSRPGKQGLGSAYAAGLREANGEFVILMDADLSHHPKHLPAFISSQRASNADIVTGTRYRLGGGVAGWNLARKLTSRGANILASFLLGASDLTGAYRLYRRDVLADLLCRTRSRGYAFQMEVIVRAQYDGRRIEEVPIVFVDRLYGTSKLGVGEYVQFARGLLGLL Colemanosphaera_angeleri_FACHB2363 SIVVPTYNERENVAVLVWMLRESLAFEVVFVDDASPDGTADVVQLQAAFGPSLVRLVQRPGKLGLGSAYTAGVRESSGRFVVLMDADLSHHPKHLPAFIAAQRATNADIVSGTRYRLGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAYRLYRRESLVQLLSSTTSRGYAFQMEVIVRAQYAGMRIEEVPIVFVDRLFGESKLGVGEYVQFVRGLLGLL Colemanosphaera_charkowiensis_NIES3383 SVIVPTYNERENVAVLVWMLRERLAFEIVFVDDASPDGTADVVQLQAAFGSALVRLVRRPGKLGLGSAYTAGVRESSGRFVVLMDADLSHHPKHLPAFIAAQRATDADIVSGTRYCLGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAYRLYRRESLIQLLSSTTSRGYAFQMEIIVRAQYAGMRIEEVPIVFVDRLFGESKLGVGEYVQFVRGLVGLL Colemanosphaera_charkowiensis_FACHB2326 SVIVPTYNERENVAVLVWMLRESLAFEVVFVDDASPDGTADVVQLQAAFGPALVRLVRRPGKLGLGSAYTAGVRESSGRFVVLMDADLSHHPKHLPAFIAAQRATNADIVSGTRYRLGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAYRLYRRESLIQLLSSTTSRGYAFQMEIIVRAQYAGMRIEEVPIVFVDRLFGESKLGVGEYVQFVRGLVGLL Astrephomene_perforata_NIES564 SIIVPTYNERENVAVLVWMLHKVLAFEVVFVDDNSPDGTAGVVQLQAVYGDTRIRLVRRPRKLGLGSAYAAGLLEAAGRFVILMDADLSHHPKHLPGFIAYQRATNADIVSGTRYRLGGGVAGWNLARKFTSRGANLLASFLLGASDLTGAYRLYRREVLIGLLAQTTSSGYAFQMEVIVRAQYLGLHVEEVPIVFVDRLFGESKLGVGEYVQFVRGLLGLL Volvulina_boldii_NIES893 SIIVPTYNERENVAVLVWMLHKYLVFEIVFVDDNSPDGTADAVQLQHVYGNHRIRLVTRPGKLGLGSAYAAGLVEASGCFIVLMDADLSHHPKHLPAFIAKQRASNADVVSSTRYRLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAYRLYRREALASLLASTTSRGYAFQMEVIVRAQYAGLRIEEVPIVFVDRLYG???????????????????? Chlamydomonas_globosa_SAG81_72 SIIVPTYNERENVAVLMWMVSKAMQYEVVFVDDASPDGTADAVELIRAFGSQRVKLVTRPGKLGLGSAYGSGLAHASGSWIILMDADLSHHPKHLPAFIAKQRATGADVVSGTRYQLGGGVAGWNLVRKLTSRGANILASFILGASDLTGAYRLYSRGALAKLLAATKSRGYAFQMEVIVRAQYSGMRIEEVPIVFVDRLYGQSKLGVGEYVQFVKGLLRLL Chlamydomonas_reinhardtii_CC503 SIIVPTYNERENVAVLMWMIDRAMQYEVVFVDDASPDGTADAVELIRAFGTHRVRLITRAGKLGLGSAYGSGLAHASGEWIILMDADLSHHPKHLPAFIAKQRATGADVVSGTRYQLGGGVAGWNLVRKLTSRGANILASFILGASDLTGAYRLYRRDALAKLLAATKSRGYAFQMEVIVRAQYSGLRIEEVPIVFVDRLYGQSKLGVGEYVQFVKGLLRLL Chlamydomonas_schloesseri_SAG2486 SIIVPTYNERENVAVLTWMIDKAMQYEVVFVDDASPDGTADAVELIRAFGPKRIKLVTRPGKLGLGSAYGAGLAHAAGEWIILMDADLSHHPKHLPAFIAKQRATGADVVSGTRYQLGGGVAGWNLVRKLTSRGANILASFILGASDLTGAYRLYRRDALAKLLAATQSRGYAFQMEVIVRAQYSGLRIEEVPIVFVDRLYGQSKLGVGEYVQFVKGLLRLL Platydorina_caudata_NIES728 SVIVPTYNERDNVAVLVWLLHKYLKYEIVFVDDASPDGTAEIVQLQAAFGSSIVRLVRRPGKLGLGSAYAAGVRESAGRFIIVMDADLSHHPKHLPAFIAAQRASNADVVSGTRYRLGGGVAGWNLTRKLTSRGANLLASFLLGASDLTGAYRLYRRDALIQLLANTTSRGYAFQMEVIVRAQYAGLQIEEVPIVFVDRLFGQSKLGVGEYVQFVRGLLGLL Volvulina_steinii_SAG90_1 SILVPTYNERENVAVLVWMLHKVLAFEVVFVDDNSPDGTADAIQLAEAYGHSRIRLVTRPGKLGLGSAYAEGLRQASGDFIVLMDADLSHHPKHLPAFIAMQRATNADVVSGTRYCLGGGVAGWNLARKLTSRGANILASFLLGASDLTGAYRLYRREALAALLASITSRGYAFQMEVIVRAQYAGLRIEEVPIVFVDRLYGESKLGVGEYVQFVRGLLGLL Gonium_quadratum_NIES653 SIIVPTYNERENVAVLLWMIHKALAFEVVFVDDSSPDGTADAVQLQAAYGPNRVRLVSRPGKQGLGSAYAAGLREASGQFIILMDADLSHHPKHLPAFIMTQRTTNADVVSGTRYQLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAYRLYRREVLSELLAKTTSRGYAFQMEVIVRAQYGGWRIEEVPIVFVDRLYGTSKLGVGEYVQFVRGLLGLL Gonium_viridistellatum_NIES654 SVIVPTYNERENVAVLLWMLHKALAFEVVFVDDSSPDGTAGVVQLQGTYGPDRVRLVSRRGKLGLGSAYAAGLREASGRFVVLMDADLSHHPKHLPAFISMQRATNADIVSGTRYRLGGGVAGWNLARKITSRGANLLASFILGASDLTGAYRLYRREVLAELLAKTTSRGYAFQMEVIVRAQYDGYRIEEVPIVFVDRLYGMSKLGVGEYVQFVRGLLRLL Chlamydomonas_debaryana_SAG70_81 SIIVPTYNERENVAVLLWMVHKAMAYEVVFVDDASPDGTADAVELQTAFGTDRVRLVKRPGKLGLGSAYGTGLAEASGQFVILMDADLSHHPKHLPAFIAKQRATGADIVSGTRYRLGGGVAGWNLVRKLTSRGANVLASFLLGASDLTGAYRLYRRDALAKLLAVTGSRGYAFQMEVIVRAQYSGLRIEEVPIVFVDRLYGQSKLGVGEYVQFVKGLLNLL Astrephomene_gubernaculifera_NIES418 TIIVPTYNERENVGVLVWMLIKALAFEVVFVDDNSPDGTADAIALQAVYGTSLVRIVRRPGKMGLGSAYAAGLQEAAGRFIILMDADLSHHPKHLPAFIATQRTTNADIVSGTRYRLGGGVAGWNLARKLTSRGANLLASFLLGASDLTGAYRLYRREVLAELLSRTASRGYAFQMEVIVRAQYMGLHVEEVPIVFVDRLYGESKLGVGEYVQFVRGLLRLL Volvulina_compacta_NIES582 SVIVPTYNERDNVAILVWMLHKALEFEVVFVDDNSPDGTAEAVKLQIIYSSIPIRLVRRSGKLGLGSAYAAGLREAKGCFVILMDADLSHHPRHLPAFISMQRATNADVVSGTRYCRGGGVAGWNLARKLTSRGANLLASFLLAASDLTGAYRLYRREALVDLLAQTTSRGYAFQMEVIVRAQYAGLRIEEVPIVFVDRLFGESKLGVGEYVQFVRGLLGLL Volvulina_pringsheimii_NIES895 SVIVPTYNERENVSVLVWMLHKYLAFEVVFVDDNSPDNTAEVVQLKHIYGSSCIRLVSRPGKLGLGSAYAAGLREASGRFVILMDADFSHHPKHLSAFISTQRKTNADIVSGTRYQLGGGVAGWNLRRKLTSRGANLLASFLLGASDLTGAYRLYRREVLVDLLAQTTSRGYAFQMEVIVRAQYAGLQIEEVPIVFVDRLYGESKLGVGEYVQFVRGLLGLL Volvulina_compacta_FACHB2337 ?????????????????????????????????????????????????????????????KLGLGSAYAAGLREASGHLVILMDADLSHHPKHLPAFISTQRTTKADVVSGTRYRLGGGVAGWNLVRKLTSRGANLLASFLLGASDLTGAYRLYRRDALTDLLGQTISRGYAFQMEVIVRAQYAGLKIAEVPIVFVDRLYGESKLGVGEYVQFVRGLARLL ; END; begin trees; tree tree_2381 = [&R] (Chlorella_variabilis_NC64A:0.932373,(Chlamydomonas_moewusii_SAG11_16f:0.666497,(((Tetrabaena_socialis_N571:0.055042,Basichlamys_sacculifera_NIES566:0.092728):0.123137,(((((((((Volvox_aureus_NIES541:0.369269,Pleodorina_japonica_UTEX2523:0.100904):0.055146,(Volvox_dissipatrix_NIES4128:0.090985,(Volvox_africanus_NIES863:0.07746,(Volvox_ovalis_NIES2569:0.061984,Volvox_tertius_NIES544:0.048065):0.05364):0.006411):0.041208):0.003651,(Volvox_obversus_NIES868:0.105698,((Volvox_carteri_weismannia_NIES866:0.036305,(Volvox_carteri_nagariensis_HK10:2.0E-6,Volvox_carteri_nagariensis_NIES865:2.0E-6):0.028582):0.006071,Volvox_carteri_kawasakiensis_NIES732:0.027271):0.060647):0.027281):0.022005,((Eudorina_elegans_NIES719:0.020618,Eudorina_elegans_NIES720:0.051058):0.035765,(Eudorina_minodii_NIES856:0.027011,Eudorina_elegans_NIES456:0.07515):0.018475):0.053458):0.0056,(((((Pleodorina_thompsonii_NIES4126:0.174367,(Pleodorina_starrii_NIES1363:2.0E-6,Pleodorina_starrii_NIES1362:2.0E-6):0.019572):0.020009,Pleodorina_indica_NIES736:0.092318):0.030189,((Eudorina_elegans_NIES568:0.02827,(Eudorina_elegans_FACHB2321:0.009976,Eudorina_elegans_NIES458:0.014363):0.046053):0.089191,(Volvox_powersii_NIES4127:0.056234,Volvox_gigas_NIES867:0.021045):0.045083):0.01606):0.010574,((Eudorina_cylindrica_NIES722:0.004866,(Eudorina_illinoisensis_NIES460:0.005074,Eudorina_elegans_NIES717:2.0E-6):0.014862):2.0E-6,Eudorina_cylindrica_FACHB2322:0.005729):0.10423):0.008637,(Eudorina_unicocca_SAG24_1c:0.064594,Eudorina_peripheralis_NIES725:0.012507):0.046695):0.051725):0.037414,((((((Vitreochlamys_aulata_NIES878:2.0E-6,Vitreochlamys_aulata_SAG80_81:2.0E-6):0.236418,Volvulina_steinii_SAG90_1:0.044765):0.027538,(Pandorina_morum_NIES890:2.0E-6,Pandorina_morum_FACHB2362:2.0E-6):0.148959):0.009943,Volvulina_boldii_NIES893:0.070715):0.014008,(Volvulina_compacta_NIES582:0.117598,(Volvulina_pringsheimii_NIES895:0.084634,Volvulina_compacta_FACHB2337:0.121363):3.0E-6):0.041412):0.014914,(((Gonium_multicoccum_NIES737:0.105998,(Gonium_octonarium_NIES851:0.083,Gonium_viridistellatum_NIES654:0.08718):0.011338):0.011797,(Gonium_Pectorale_NIES2863:0.165933,Gonium_quadratum_NIES653:0.05079):0.010961):0.046126,(Yamagishiella_unicocca_FACHB2364:0.092922,(Astrephomene_perforata_NIES564:0.107137,Astrephomene_gubernaculifera_NIES418:0.084915):0.021981):0.012859):0.008165):0.028156):0.009143,((Volvox_globator_SAG_199_80:0.069139,(Volvox_barberi_NIES730:0.041639,(Volvox_ferrisii_NIES3986:0.013017,Volvox_kirkiorum_NIES_543:0.036849):0.017201):0.008445):0.127208,(Pandorina_colemaniae_NIES572:2.0E-6,Pandorina_colemaniae_FACHB2361:0.00531):0.120756):0.038317):0.015542,((Colemanosphaera_angeleri_FACHB2363:0.011454,(Colemanosphaera_charkowiensis_NIES3383:0.025323,Colemanosphaera_charkowiensis_FACHB2326:2.0E-6):0.023961):0.046766,Platydorina_caudata_NIES728:0.108715):0.070582):0.011045,(Chlamydomonas_debaryana_SAG11_55a:0.222419,(((Chlamydomonas_globosa_SAG81_72:0.035839,Chlamydomonas_schloesseri_SAG2486:0.037062):0.006962,Chlamydomonas_reinhardtii_CC503:0.01973):0.093464,Chlamydomonas_debaryana_SAG70_81:0.034076):0.102611):0.040675):0.055858):0.038424,Vitreochlamys_ordinata_NIES882:0.187844):0.136093):0.16637,Vitreochlamys_nekrassovii_SAG11_10:0.153705); end;