File Quemere_gh_filtered_data.txt This file contains the filtered sequences produced by G/H primers. The sequences have been produced by the Illumina technology (GA IIx platform). Data collection: Erwan Quéméré, Julie Champeau, Rasolondraibe Emmanuel collected faeces samples in the field. Erwan Quéméré, Christian Miquel, Emeline Luillier performed the DNA extraction and the DNA amplification. Erwan Quéméré, Pierre Taberlet performed the data analysis. Contact author: Erwan Quéméré (erwan@quemere.fr) # Taxon assignation achieved with EcoTag program Column heading: (i) the ID for the sequence (ii) the total number of occurrence of the sequence in the dataset (count) order_taxid: taxid of the identified order order_name: name of the identified order family_taxid: taxid of the identified family family_name: name of the identified family genus_taxid: taxid of the identified genus genus_name: name of the identified genus species_taxid: taxid of the identified species species_name: name of the identified species taxid: taxid of the scientific name rank: level of identification (order, family, etc.) scientific_name: final identification based on GenBank (can be an order, family, tribe, genus, species, etc.) best_identity: best match with the closest sequence in the sample:Lemur1: number of reads of the relevant sequence for sample Lemur1 sample:Lemur2: see above ... sample:Lemur96: see above sample:Lemur1_status: status (H,I,S, NA) assigned to the different sequences in each pcr during the filtering (see material&methods). for sample Lemur1 sample:Lemur2_status: see above ... sample:Lemur96_status: see above “H” (header) means that there is no other variant (with a single difference) with a higher count of this sequence in the PCR. “S” (single) means that there is no other variant with a single difference) in the PCR. “I” (internal) means that another variant (with a single difference) with higher count is present in the PCR. Missing data: NA