#NEXUS [written Fri Jan 14 15:19:07 PST 2011 by Mesquite version 2.73 (build 544) at gore.nceas.ucsb.edu/128.111.220.129] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=40; TAXLABELS Arctostaphylos_andersonii Arctostaphylos_auriculata Arctostaphylos_bakeri Arctostaphylos_canescens Arctostaphylos_catalinae Arctostaphylos_columbiana Arctostaphylos_cruzensis Arctostaphylos_densiflora Arctostaphylos_glandulosa Arctostaphylos_glauca Arctostaphylos_hispidula Arctostaphylos_hookeri Arctostaphylos_hooveri Arctostaphylos_imbricata Arctostaphylos_manzanita Arctostaphylos_mendocinoensis Arctostaphylos_mewukka Arctostaphylos_montereyensis Arctostaphylos_morroensis Arctostaphylos_myrtifolia Arctostaphylos_nissenana Arctostaphylos_nummularia Arctostaphylos_obispoensis Arctostaphylos_pajaroensis Arctostaphylos_pallida Arctostaphylos_parryana Arctostaphylos_patula Arctostaphylos_pechoensis Arctostaphylos_peninsularis Arctostaphylos_pilosula Arctostaphylos_pringlei Arctostaphylos_pungens Arctostaphylos_purissima Arctostaphylos_refugioensis Arctostaphylos_silvicola Arctostaphylos_stanfordiana Arctostaphylos_tomentosa Arctostaphylos_uvaursi Arctostaphylos_viridissima Arctostaphylos_viscida ; END; BEGIN CHARACTERS; TITLE Arctostaphylos_ITS1_and_ITS2_alignment; DIMENSIONS NCHAR=511; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Arctostaphylos_andersonii GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---YGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_auriculata GAATGCCAATCAGAAAGACCCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAATTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGA-TCTCGGCAACGGATATTTCGGTCAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---TGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTWATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_bakeri GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACAACTCTCGGCAACGGATATCTCGGCTAACCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_canescens GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_catalinae GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTAT----AATTTCGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_columbiana GAATGCCAAGCARAAAGA-CCGCG-AACATGTT-ATGTAT----AATTYTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATYTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_cruzensis TAAAGCCA-GCCGAAAGA-CCGCG-AACATGTA-GAATTT----AGTGTTGGAATAAATTGAGCGG-TGGA-CTACTGGTCGACTT-CTATATGTTCCTTCTCAAATGGGTG-AAGGGCCT-ACTGGAAACTAGTGCAT-CACTAGTAGGTTAACGAAACGCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AAGGAATGCTCGCCTAC-ACCCATTCGTGGGATG----TGG-GCTCGC-TATTACGAAACTCAAAACGACTCTCGG-AACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTGGAT Arctostaphylos_densiflora GAATGCCAAGCACAAAGA-CCGC--AACATGTT-ATGTAT----GCTTCCGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTTTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGCTG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATTTCTCGGCTAGCCTTG-TCCTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CAC------CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACRYACAAATGTTAC--TGAT Arctostaphylos_glandulosa GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_glauca GAATGCCAAGCAGAAAGACCCGYG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTRGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGG--AGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_hispidula GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----GCTTCCGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTTTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAGCTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGCTG----TGGCGCTCGCATATTTCGTAAAACTAAACAACTCTCGGCACCGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CACGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GA-GACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACSTTGAT Arctostaphylos_hookeri GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_hooveri GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACAACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_imbricata GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----ACTTCCGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGCTG----TGGCG-TCGCATATTTCGTAAAACTAAAAGACTCTCGGCAACGGATATCTCGGCTAGCATTG-TCTTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CATGTT---CGTGC-TTGGTTGGTCTAAAAATGCAGTCCCC-GATGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_manzanita ----------------------------------------------------------TTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_mendocinoensis GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTAT----GCTTCCGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTKTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAGCTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGCTG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CACGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_mewukka GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----ACTTCCGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT--CTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGCTG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGTTAGCATTG-TCCTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CATGTT---CGTGC-TTGGTTGGTCTAAAAATGCAGTCCCC-GA-GACGGACATCACAACTAGTGGTGGTTGTTTAACCGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACCAATGTTACCTTGAT Arctostaphylos_montereyensis GAATGCCAAGCAGAAAGACCCGCGAAACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAAAGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACGTTGAT Arctostaphylos_morroensis GAATGCCG-GCAAAAAGA-CCGCG-AACATGTT-ATGTTT----AATTC-GGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-C-ATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAAC-TGTTCATTCACTTGTCAAA-AMGRAAACCCGGCGCAAACCGCGCCAAGGAAAATYTTGGAA--AA-AAATGCACTCCTAC-ACCCATTCRTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAASGACTCTCGGCAACGGATATYTCGGMTAACCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAATGCAGTCCCC-GACGAAGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCC-TTGACCCAAAAGTAACATACAAATGTTACTTTGAT Arctostaphylos_myrtifolia GAATGCCAAGCAAAAAGA-CCGCG-AACATGTT-ATGTAT----ACTATCGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGTTG----TGGTGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CACGTT---CGTGC-TTGGTTGGTCTAAAAACGTAGTCCCC-GACGACGGACATCACAACTA-TGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_nissenana GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTA-----ACTTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTY-CTATTTGTTCCTTCTCAAGTGGGTSCAAGGTCCT-YCTGGAAACTTGTTCATTCACTTGYCAAATAACGAAACCCGGCSCAAMCCSCSCCAAGGAAAATCTTGGAA--AA--AATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATWTTTCGKAACACTAAACGACTCTCGGCAACGGATWTCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTW---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_nummularia GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTAT----ACTTCCGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAGCTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGCTG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CACGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_obispoensis GAATGCCAAGCAAAAAGA-CCGCGAAACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAATGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACGTGGAT Arctostaphylos_pajaroensis GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACAACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_pallida GAATGCCAMGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAASGGATATCTCGGCTAGCCTTG-TCTTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACRGTGAT Arctostaphylos_parryana GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----ACTTCCGGAA-AAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGG-GCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGCTG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CACGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_patula GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----ACTTCCGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAGCTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAATCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGCTG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CACGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCGTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_pechoensis CATTGCGGGACAAAAAA--CCGCA-AACATGTG-ATGTAT----AATCCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATACACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACAACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAATGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTTACCTACAAATGGGACCTTGAT Arctostaphylos_peninsularis GAATGCCAAGCAAAAAGA-ACGCG-AACATGTT-ATGTAT----ACTTCGGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTTGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTCTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACGAATGTTACCCGGAT Arctostaphylos_pilosula GAATGCCAAGCARAAAGA-CCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_pringlei GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTAT----ACTTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTYGTGGGATG----TGGCGCTCGCATATTTTGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTCTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACGAATGTTACCTTGAT Arctostaphylos_pungens GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTAT----AMTTYYGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAARCTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGMTG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACRTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CRCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_purissima GAATGCGAAGCAAAAAA--CCGCGAAACATGTG-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTGACCTTGAT Arctostaphylos_refugioensis GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_silvicola GAATGCCAAGCA-AAAGA-CCGCGAAACATGTTGATGTAT----AATTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGTGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCCAAAGTTACATACTAATGGGACCTTGAA Arctostaphylos_stanfordiana GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTAT----GCTTCCGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTKTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAGCTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGCTG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CACGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_tomentosa GAATGCCAAGCAGAAAGACCCGCG-AACATGTT-ATGTAT----ACTTMTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTMAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCATGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTSGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_uvaursi GAATGCCAAGCAGAAAGACCTGCG-AACATGTT-ATGTAT----ACTTMTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA-AAATGCATGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACATGAATGCGTGGGTGG-ATATTGGCCTCCCGTG--CACGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_viridissima GAATGCCAAGCAGACAGACCCGA--AACATGTT-ATGTAT----AATGCTGGAAAAAA-GGAGCGG-T-GACCTAGTTGTCGCCTT-CTATTTGTCCCTTCTCAAGTGGGTGCTAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGGCAAGGAAAATCTTGGAA--AA-AAATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAAAACTAAACGACTCTCGGCAACGGATATCTCGGCTAGCCTTG-TCCTTCCATGGGCACGTGAATG-GTGGGTGG-ATATTGGCCTCCCGTG--CGCGTT---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT Arctostaphylos_viscida GAATGCCAAGCAGAAAGA-CCGCG-AACATGTT-ATGTAT----ACTTCTGGAAAAAATTGAGCGG-TGGACCTAGTTGTCGCCTT-CTATTTGTTCCTTCTCAAGTGGGTGCAAGGTCCT-TCTGGAAACTTGTTCATTCACTTGTCAAATAACGAAACCCGGCGCAAACCGCGCCAAGGAAAATCTTGGAA--AA--AATGCACGCCTAC-ACCCATTCGTGGGATG----TGGCGCTCGCATATTTCGTAACACTAAACGATTCTCGGCAACGGATATCTCGGTTAGCCTTG-TCCTTCCATGGGCACGTGAATGCGTGGGTGGAATATTGGCCTCCCGTG--CGCGTA---CGTGC-TTGGTTGGTCTAAAAACGCAGTCCCC-GACGACGGACATCACAACTAGTGGTGGTTGTTTAACTGTTGCGTAATGTTGTGTATGCC-ATTGTTGTT---GTGGGTTGTTGCTCCTTTGACCCAAAAGTAACATACAAATGTTACCTTGAT ; END; BEGIN CHARACTERS; TITLE 'Arctostaphylos character states (c=chaparral, f=forest, b=both)'; DIMENSIONS NCHAR=1; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1 2 3 4 5 6 7 8 9 A B C D E F G H J K M N P Q R S T U V W X Y Z a b c d e f"; CHARSTATELABELS 1 'forest_chap_both' ; MATRIX Arctostaphylos_andersonii b Arctostaphylos_auriculata c Arctostaphylos_bakeri b Arctostaphylos_canescens b Arctostaphylos_catalinae c Arctostaphylos_columbiana b Arctostaphylos_cruzensis b Arctostaphylos_densiflora c Arctostaphylos_glandulosa b Arctostaphylos_glauca b Arctostaphylos_hispidula b Arctostaphylos_hookeri b Arctostaphylos_hooveri b Arctostaphylos_imbricata c Arctostaphylos_manzanita b Arctostaphylos_mendocinoensis f Arctostaphylos_mewukka b Arctostaphylos_montereyensis b Arctostaphylos_morroensis b Arctostaphylos_myrtifolia b Arctostaphylos_nissenana b Arctostaphylos_nummularia b Arctostaphylos_obispoensis f Arctostaphylos_pajaroensis c Arctostaphylos_pallida b Arctostaphylos_parryana b Arctostaphylos_patula f Arctostaphylos_pechoensis b Arctostaphylos_peninsularis c Arctostaphylos_pilosula b Arctostaphylos_pringlei b Arctostaphylos_pungens b Arctostaphylos_purissima c Arctostaphylos_refugioensis c Arctostaphylos_silvicola b Arctostaphylos_stanfordiana b Arctostaphylos_tomentosa b Arctostaphylos_uvaursi b Arctostaphylos_viridissima b Arctostaphylos_viscida b ; END; BEGIN TREES; Title Arctostaphylos_maximum_clade_credibility_tree; LINK Taxa = Taxa; TRANSLATE 1 Arctostaphylos_andersonii, 2 Arctostaphylos_auriculata, 3 Arctostaphylos_bakeri, 4 Arctostaphylos_canescens, 5 Arctostaphylos_catalinae, 6 Arctostaphylos_columbiana, 7 Arctostaphylos_cruzensis, 8 Arctostaphylos_densiflora, 9 Arctostaphylos_glandulosa, 10 Arctostaphylos_glauca, 11 Arctostaphylos_hispidula, 12 Arctostaphylos_hookeri, 13 Arctostaphylos_hooveri, 14 Arctostaphylos_imbricata, 15 Arctostaphylos_manzanita, 16 Arctostaphylos_mendocinoensis, 17 Arctostaphylos_mewukka, 18 Arctostaphylos_montereyensis, 19 Arctostaphylos_morroensis, 20 Arctostaphylos_myrtifolia, 21 Arctostaphylos_nissenana, 22 Arctostaphylos_nummularia, 23 Arctostaphylos_obispoensis, 24 Arctostaphylos_pajaroensis, 25 Arctostaphylos_pallida, 26 Arctostaphylos_parryana, 27 Arctostaphylos_patula, 28 Arctostaphylos_pechoensis, 29 Arctostaphylos_peninsularis, 30 Arctostaphylos_pilosula, 31 Arctostaphylos_pringlei, 32 Arctostaphylos_pungens, 33 Arctostaphylos_purissima, 34 Arctostaphylos_refugioensis, 35 Arctostaphylos_silvicola, 36 Arctostaphylos_stanfordiana, 37 Arctostaphylos_tomentosa, 38 Arctostaphylos_uvaursi, 39 Arctostaphylos_viridissima, 40 Arctostaphylos_viscida; TREE Arctostaphylos_maximum_clade_credibility_tree = (((((((25:3.853082530139604,39:3.8530825301395994):1.7258888962379162,2:5.5789714263775165):2.503730586448782,((4:2.5792446109061764,(1:1.1348558223333949,32:1.1348558223334042):1.4443887885727766):3.145138905932731,(((30:2.18958,(13:1.8942096,(24:1.2288116377789757,3:1.2288116377789755):0.665398):0.295372252872013):1.0E-7,((5:1.6181661978650892,15:1.6181661978650959):0.57142058,(6:1.029643882294319,9:1.0296438822943141):1.159942796):1.0E-7):0.13396024840069742,((34:1.1604602632962342,10:1.1604602632962395):1.1630636,12:2.3235239):1.0E-7):3.4008364644844944):2.358318495987402):2.2906309,(18:5.217464955415479,(23:3.334355054414714,19:3.3343550544147056):1.883109901000759):5.155867947535511):3.459358345652591,((33:2.8947213802679355,28:2.8947213802679355):2.9831112781188573,35:5.877832658386792):7.954858590216783):9.248859585871019,(((21:3.629089245526593,40:3.629089245526592):4.510882221575768,7:8.139971467102365):6.864114557753959,((38:4.138299979035213,37:4.138299979035205):6.4678578633908925,(31:4.176230201345268,29:4.176230201345268):6.429927641080824):4.3979281824302365):8.077464809618286):15.297984403897228,(((17:4.617253820424821,14:4.617253820424821):8.468506915500981,(20:10.961927805851987,((((11:1.4910368065916924,16:1.4910368065916906):0.8795009339802251,36:2.3705377405719155):1.5577843152357622,8:3.9283220558076772):4.453885969668377,(22:4.650959789167299,27:4.650959789167297):3.7312482363087573):2.579719780375923):2.123832930073821):3.9772340988692,26:17.062994834795003):21.316540403576823); END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED (CHARACTERS = Arctostaphylos_ITS1_and_ITS2_alignment) = unord: 1 - 511; TYPESET * UNTITLED (CHARACTERS = 'Arctostaphylos character states (c=chaparral, f=forest, b=both)') = unord: 1; END; BEGIN CODONS; CODESET * UNTITLED (CHARACTERS = Arctostaphylos_ITS1_and_ITS2_alignment) = universal: 1 - 511; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED (CHARACTERS = Arctostaphylos_ITS1_and_ITS2_alignment) = 'Jukes-Cantor': 1 - 511; ProbModelSet * UNTITLED (CHARACTERS = 'Arctostaphylos character states (c=chaparral, f=forest, b=both)') = 'Mk1 (est.)': 1; END;