#NEXUS Begin trees; [Treefile saved Sun Jul 27 12:49:37 2014] [! >Data file = C:\PAUP-MP-T-TRIBE-TYKIB-FINAL.nex >Bootstrap method with heuristic search: > Number of bootstrap replicates = 10000 > Starting seed = 1545901573 > Optimality criterion = parsimony > Character-status summary: > Of 815 total characters: > All characters are of type 'unord' > All characters have equal weight > 293 characters are constant > 61 variable characters are parsimony-uninformative > Number of parsimony-informative characters = 461 > Gaps are treated as "missing" > Multistate taxa interpreted as uncertainty > Starting tree(s) obtained via stepwise addition > Addition sequence: random > Number of replicates = 10 > Starting seed = 1101337148 > Number of trees held at each step during stepwise addition = 1 > Branch-swapping algorithm: tree-bisection-reconnection (TBR) > Steepest descent option not in effect > No more than 1 tree of score (length) greater than or equal to 1 will be > saved in each replicate > 'MaxTrees' setting = 10000 (will not be increased) > Branches collapsed (creating polytomies) if maximum branch length is zero > 'MulTrees' option in effect > Topological constraints not enforced > Trees are unrooted > > 10000 bootstrap replicates completed > Time used = 43:48:31.0 ] Translate 1 Amitostigma_alpestre_-KJ460093, 2 Amitostigma_alpestre_-324, 3 Amitostigma_amplexifolium, 4 Amitostigma_basifoliatum, 5 Amitostigma_capitatum, 6 Amitostigma_faberi_-116, 7 Amitostigma_faberi_-92, 8 Amitostigma_faberi_-110, 9 Amitostigma_farreri_-93, 10 Amitostigma_farreri_-KJ460047, 11 Amitostigma_gonggashanicum_-94, 12 Amitostigma_gonggashanicum_-117, 13 Amitostigma_cf._faberi, 14 Amitostigma_gracile_-RMB, 15 Amitostigma_gracile_-130, 16 Amitostigma_gracile_-KJ460036, 17 Amitostigma_gracile_-82, 18 Amitostigma_gracile_-1061, 19 Amitostigma_hemipilioides_-52, 20 Amitostigma_hemipilioides_-119, 21 Amitostigma_keiskei, 22 Amitostigma_keiskeoides, 23 Amitostigma_kinoshitae, 24 Amitostigma_lepidum, 25 Amitostigma_monanthum_-139, 26 Amitostigma_monanthum_-174, 27 Amitostigma_monanthum_-KJ460037, 28 Amitostigma_monanthum_-173, 29 Amitostigma_papilionaceum, 30 Amitostigma_parceflorum, 31 Amitostigma_physoceras_-107, 32 Amitostigma_physoceras_-177, 33 Amitostigma_pinguicula_-75, 34 Amitostigma_pinguicula_-172, 35 Amitostigma_pinguicula_-72, 36 Amitostigma_pinguicula_-74, 37 Amitostigma_cf._amplexifolium, 38 Amitostigma_simplex, 39 Amitostigma_sp._1_-KJ460097, 40 Amitostigma_sp._2_-KJ460091, 41 Amitostigma_sp._3_-KJ460090, 42 Amitostigma_tetralobum_-86, 43 Amitostigma_tetralobum_-62, 44 Amitostigma_thailandicum, 45 Amitostigma_cf._gonggashanicum, 46 Amitostigma_tibeticum, 47 Amitostigma_trifurcatum, 48 Amitostigma_wenshanense, 49 Amitostigma_yuanum_-96, 50 Amitostigma_yuanum_-KJ460092, 51 Anacamptis_champagneuxii_-AY364879, 52 Anacamptis_coriophora_-AY369086, 53 Anacamptis_laxiflora_-AM711747, 54 Anacamptis_morio_-AY364881, 55 Anacamptis_pyramidalis_-AY364870, 56 Androcorys_ophioglossoides_-KJ460046, 57 Androcorys_pugioniformis_-KJ460048, 58 Bonatea_bracteata_-DQ522057, 59 Bonatea_polypodantha_-DQ522062, 60 Bonatea_pulchella_-DQ522065, 61 Brachycorythis_henryi, 62 Brachycorythis_macrantha_-AJ000146, 63 Brachycorythis_neglecta, 64 Cynorkis_fastigiata_-JQ045490, 65 Cynorkis_grandiflora_-EF079186, 66 Dactylorhiza_aristata_-DQ022872, 67 Dactylorhiza_euxina_-DQ022886, 68 Dactylorhiza_foliosa_-DQ022866, 69 Dactylorhiza_iberica_-DQ022878, 70 Dactylorhiza_incarnata_-DQ022885, 71 Dactylorhiza_maculata_-DQ022867, 72 Dactylorhiza_majalis_-DQ074206, 73 Dactylorhiza_praetermissa_-DQ074224, 74 Dactylorhiza_romana_-DQ022874, 75 Dactylorhiza_saccifera_-DQ022870, 76 Dactylorhiza_sambucina_-DQ022875, 77 Dactylorhiza_traunsteineri_-DQ074227, 78 Dactylorhiza_viridis, 79 Platanthera_contigua, 80 Platanthera_uniformis_-JN696448, 81 Platanthera_urceolata, 82 Disa_buchenaviana_-DQ414921, 83 Galearis_roborowskyi, 84 Galearis_spathulata, 85 Galearis_tschiliensis_-JN696457, 86 Galearis_wardii_-JN696458, 87 Gennaria_diphylla_-AY351380, 88 Gymnadenia_austriaca_-DQ022893, 89 Gymnadenia_borealis_-DQ022889, 90 Gymnadenia_conopsea_-JQ768196, 91 Gymnadenia_crassinervis_-DQ022890, 92 Gymnadenia_frivaldii_-DQ351277, 93 Gymnadenia_nigra_-DQ022892, 94 Gymnadenia_orchidis, 95 Habenaria_arenaria_-DQ522073, 96 Habenaria_clavata_-DQ522074, 97 Habenaria_delavayi, 98 Habenaria_dentata_-KJ460038, 99 Habenaria_dives_-DQ522075, 100 Habenaria_foliosa_-JN114529, 101 Habenaria_grandifloriformis_-JN114541, 102 Habenaria_hamata_-HM777586, 103 Habenaria_heyneana_-JN114547, 104 Habenaria_laevigata_-DQ522076, 105 Habenaria_lithophila_-DQ522077, 106 Habenaria_macroceratitis_-HF560577, 107 Habenaria_petalodes_-HM777583, 108 Habenaria_praestans_-DQ522079, 109 Habenaria_rhodochelia_-KJ460043, 110 Habenaria_stenopetala_-JN696451, 111 Habenaria_tridens_-DQ522080, 112 Hemipilia_calophylla_-157, 113 Hemipilia_calophylla_-KJ460095, 114 Hemipilia_crassicalcarata_-RMB, 115 Hemipilia_crassicalcarata_-89, 116 Hemipilia_cordifolia_-AF348036, 117 Hemipilia_cordifolia_-RMB, 118 Hemipilia_flabellata_-RMB1, 119 Hemipilia_flabellata_-KJ460050, 120 Hemipilia_flabellata_-140, 121 Hemipilia_forrestii_-KJ460049, 122 Hemipilia_henryi_-RMB, 123 Hemipilia_kwangsiensis_-RMB, 124 Hemipilia_kwangsiensis_-103, 125 Hemipilia_limprichtii_-RMB, 126 Hemipilia_flabellata_-RMB2, 127 Hemipilia_sp._-KJ460040, 128 Hemipiliopsis_purpureopunctata_-RMB, 129 Hemipiliopsis_purpureopunctata_-KJ460051, 130 Herminium_alaschanicum_-KJ460100, 131 Herminium_lanceum_-JN696452, 132 Herminium_monorchis, 133 Herminium_ophioglossoides_-KJ460102, 134 Herminium_souliei, 135 Himantoglossum_adriaticum_-FR750401, 136 Himantoglossum_caprinum_-FR750402, 137 Himantoglossum_hircinum_-AY351385, 138 Himantoglossum_robertianum_-AY351384, 139 Neotinea_conica_-AY364880, 140 Neotinea_maculata_-AM711744, 141 Neotinea_tridentata_-HQ657132, 142 Neotinea_ustulata_-AY014549, 143 Neottianthe_cucullata_-RMB1, 144 Neottianthe_camptoceras, 145 Neottianthe_compacta_-JN696455, 146 Neottianthe_cucullata_-RMB2, 147 Neottianthe_cucullata_var._calcicola, 148 Neottianthe_cucullata_-JN696456, 149 Neottianthe_cucullata_-576, 150 Neottianthe_cucullata_-724, 151 Neottianthe_cucullata_-912, 152 Neottianthe_fujisanensis, 153 Neottianthe_cucullata_-JN696454, 154 Neottianthe_oblonga, 155 Nujiangia_griffithii_-JN696445, 156 Ophrys_apifera_-AJ539529, 157 Ophrys_bombyliflora_-AM711810, 158 Ophrys_fuciflora_-AM711830, 159 Ophrys_fusca_-AM711832, 160 Ophrys_insectifera_-AM711840, 161 Ophrys_scolopax_-AM711733, 162 Ophrys_speculum_-AY014541, 163 Ophrys_sphegodes_-AM711739, 164 Ophrys_umbilicata_-AM711742, 165 Orchis_anatolica_-HQ657131, 166 Orchis_anthropophora_-AY364869, 167 Orchis_italica_-AM711745, 168 Orchis_mascula_-AY351379, 169 Orchis_militaris_-AY699977, 170 Orchis_purpurea_-AY364882, 171 Pecteilis_gigantea_-JN114651, 172 Peristylus_coeloceras_-JN696459, 173 Peristylus_densus, 174 Peristylus_elisabethae_-JN114667, 175 Peristylus_flagellifer_-JN696462, 176 Peristylus_forceps_-JN696461, 177 Peristylus_mannii, 178 Peristylus_plantagineus_-JN114672, 179 Peristylus_tentaculatus_-KJ460035, 180 Platanthera_angustata_-KJ460075, 181 Platanthera_aquilonis_-EF025530, 182 Platanthera_bhutanica_-KJ460071, 183 Platanthera_brevicalcarata_-KJ460067, 184 Platanthera_chlorantha_-KJ460085, 185 Platanthera_damingshanica_-KJ460081, 186 Platanthera_dilatata_-EF025524, 187 Platanthera_dulongensis_-KJ460080, 188 Platanthera_edgeworthii_-JN114685, 189 Platanthera_finetiana_-KJ460101, 190 Platanthera_japonica_-KJ460082, 191 Platanthera_juncea_-KJ460062, 192 Platanthera_latilabris_-JN114683, 193 Platanthera_mandarinorum_-JN696464, 194 Platanthera_praeclara_-AF301445, 195 Platanthera_roseotincta, 196 Platanthera_silaensis_-KJ460065, 197 Platanthera_stenantha_-JN696463, 198 Platanthera_stenophylla_-KJ460072, 199 Ponerorchis_brevicalcarata_-RMB, 200 Ponerorchis_brevicalcarata_-914, 201 Ponerorchis_brevicalcarata_-KJ460041, 202 Ponerorchis_cf._chidori_-RMB, 203 Ponerorchis_chidori_-0713, 204 Ponerorchis_chidori_-1012, 205 Hsenhsua_chrysea_-KJ460056, 206 Hsenhsua_chrysea_-KJ460096, 207 Ponerorchis_chusua_-713, 208 Ponerorchis_chusua_-KJ460034, 209 Ponerorchis_chusua_-812, 210 Ponerorchis_chusua_-915, 211 Ponerorchis_chusua_-158, 212 Ponerorchis_chusua_-RMB, 213 Ponerorchis_graminifolia_-0711, 214 Ponerorchis_graminifolia_-1057, 215 Ponerorchis_graminifolia_-1065, 216 Ponerorchis_suzukiana, 217 Ponerorchis_joo-iokiana_-RMB, 218 Ponerorchis_kiraishiensis, 219 Ponerorchis_limprichtii_-178, 220 Ponerorchis_cf._limprichtii, 221 Ponerorchis_limprichtii_-108, 222 Ponerorchis_omeishanica, 223 Ponerorchis_sichuanica_-KJ460059, 224 Porolabium_biporosum_-KJ460042, 225 Pseudorchis_straminea_-DQ022894, 226 Satyrium_nepalense, 227 Serapias_cordigera_-AY364884, 228 Serapias_lingua_-AF348062, 229 Serapias_parviflora_-AY014550, 230 Serapias_perez-chiscanoi_-AY364886, 231 Serapias_vomeracea_-AY014551, 232 Sirindhornia_pulchella_-KJ460045, 233 Stenoglottis_longifolia_-AF348065, 234 Steveniella_satyrioides_-AM711746, 235 Tsaiorchis_keiskeoides_-JN696466 ; tree PAUP_1 = [&U] (82:100,(((((((((((((1:100,218:100)84:84,2:100)91:91,208:100,(209:100,((210:100,217:100)63:63,211:100,(212:100,223:100)60:60)62:62)92:92)82:82,207:100)79:79,222:100)100:100,(49:100,50:100)100:100)68:68,((9:100,10:100)98:98,46:100)100:100)82:82,((((((3:100,5:100,(7:100,8:100)87:87,11:100,12:100,45:100)62:62,4:100)67:67,6:100)91:91,((13:100,39:100)100:100,25:100)68:68,((26:100,38:100)82:82,(27:100,28:100)95:95)97:97,((30:100,41:100)54:54,40:100)100:100)86:86,37:100)83:83,((42:100,43:100)100:100,47:100)100:100)93:93,((14:100,15:100,16:100,17:100,18:100)100:100,(((143:100,154:100)91:91,(145:100,147:100,153:100)100:100)55:55,144:100,((146:100,149:100,150:100)64:64,(148:100,151:100)86:86)100:100,152:100)88:88)100:100,((19:100,20:100)100:100,(((44:100,((219:100,221:100)100:100,220:100)99:99)97:97,(((112:100,113:100)100:100,123:100)96:96,((114:100,115:100)89:89,(116:100,117:100,127:100)62:62,((118:100,119:100,121:100,124:100)51:51,120:100,125:100,126:100)79:79,122:100)96:96)100:100)66:66,(128:100,129:100)100:100,(199:100,(200:100,201:100)89:89)100:100)62:62)81:81,(((21:100,23:100)95:95,(((202:100,214:100,215:100)63:63,213:100,216:100)100:100,(203:100,204:100)100:100)84:84)100:100,24:100)69:69,((22:100,235:100)98:98,48:100)100:100,(29:100,31:100,32:100)100:100)55:55,((33:100,35:100)61:61,(34:100,36:100)64:64)100:100)99:99,((61:100,63:100)100:100,62:100)100:100)74:74,(((((51:100,54:100)100:100,52:100,55:100)97:97,53:100,((227:100,230:100)63:63,(228:100,231:100)61:61,229:100)100:100)75:75,(((135:100,137:100)78:78,136:100)100:100,138:100)100:100,(((156:100,(158:100,(161:100,163:100)67:67,164:100)93:93)91:91,((157:100,162:100)86:86,159:100)85:85)57:57,160:100)100:100,234:100)73:73,(((((66:100,(((((68:100,71:100)100:100,72:100)69:69,(73:100,75:100)96:96)73:73,76:100)71:71,74:100)94:94)83:83,78:100)66:66,(67:100,(70:100,77:100)86:86)96:96,69:100)95:95,(((88:100,93:100)99:99,92:100)58:58,89:100,90:100,(91:100,94:100)100:100)100:100)92:92,((((((79:100,80:100)100:100,81:100,(180:100,185:100)100:100,(182:100,197:100)100:100,187:100,((((191:100,198:100)71:71,196:100)92:92,195:100)87:87,193:100)83:83)100:100,184:100)56:56,183:100)70:70,(181:100,186:100)100:100,(189:100,190:100)100:100,194:100)88:88,((83:100,85:100)100:100,(84:100,86:100)88:88)78:78,225:100)57:57)60:60,((139:100,(141:100,142:100)62:62)100:100,140:100)100:100,((165:100,168:100)99:99,(166:100,167:100,(169:100,170:100)99:99)61:61)100:100)98:98)70:70,232:100)89:89,((((56:100,224:100)100:100,57:100)99:99,((130:100,132:100,133:100,172:100,174:100)71:71,(176:100,177:100)98:98)100:100,(131:100,134:100)93:93,(188:100,192:100)100:100,(205:100,206:100)100:100)58:58,(97:100,(98:100,109:100,171:100)55:55)100:100)66:66,(((58:100,(59:100,60:100)100:100)59:59,104:100)99:99,95:100,108:100)63:63,(64:100,65:100)100:100,(87:100,155:100)100:100,(((96:100,99:100)88:88,(101:100,105:100)99:99)100:100,(((100:100,103:100)100:100,110:100)100:100,(((102:100,107:100)100:100,106:100)96:96,111:100)100:100)94:94)98:98,(((173:100,179:100)70:70,175:100)100:100,178:100)100:100,233:100)94:94,226:100)0; End;