README-file for "Tree files of phylogenomic analyses" 7) tree-files for all analyses: 104-taxa UFboot (1000BS) = CAT_104tax_h0.42_g1.bmge.fas.UFboot.treefile 61-taxa UFboot (1000BS) = CAT_61tax_h0.42_g1.bmge.fas.UFboot.treefile 61-taxa PMSF (200BS) = CAT_61tax_h0.42_g1.bmge.fas.PMSF.treefile 58-nLB UFboot (1000BS) = CAT_58tax-nLB_h0.42_g1.bmge.fas.UFboot.treefile 58-nLB PMSF (200BS) = CAT_58tax-nLB_h0.42_g1.bmge.fas.PMSF.treefile 58-nDP UFboot (1000BS) = CAT_58tax-nDP_h0.42_g1.bmge.fas.UFboot.treefile 58-nDP PMSF (100BS) = CAT_58tax-nDP_h0.42_g1.bmge.fas.PMSF.treefile 61-SR4 (500BS) = CAT_61tax_h0.42_g1.bmge.SR4.fas.treefile 61-SFSR (10x tree-files, ~4% of sites removed each step (1000 UFboot each)) nLB = no long-branching taxa nDP = no data-poor taxa (<10% of sites) SR4 = recoding into 4 categories based on SR4-scheme SFSR = stepwise fastest site removed UFboot = Ultra-fast bootstrap BS = Bootstrap PMSF = Posterior Mean Site Frequency