This Baer_and_Garcia-Robledo_3_Cephaloleia_spp_quantitative_genetics_Readme.txt file was generated on 2019-12-19 by Christina S. Baer ------------------- GENERAL INFORMATION ------------------- Title of Dataset:Baer_and_Garcia-Robledo_3_Cephaloleia_spp_quantitative_genetics Author Information (Name, Institution, Address, Email) Principal Investigator: Associate or Co-investigator: Christina S. Baer; University of Connecticut; 75 N. Eaglesville Rd., Unit 3043, Storrs, CT, 06269-3043, USA; christina.baer@uconn.edu Carlos Garcia-Robledo; University of Connecticut; 75 N. Eaglesville Rd., Unit 3043, Storrs, CT, 06269-3043, USA; carlos.garcia-robledo@uconn.edu Alternate Contact(s): Date of data collection (YYYY-MM-DD): 2017-06-29 to 2018-11-07 Geographic location of data collection: La Selva Biological Station, Puerto Viejo, Sarapaqui, Costa Rica Information about funding sources or sponsorship that supported the collection of the data: -------------------------- SHARING/ACCESS INFORMATION -------------------------- Licenses/restrictions placed on the data, or limitations of reuse: CC0 Recommended citation for the data: Citation for and links to publications that cite or use the data: Links to other publicly accessible locations of the data: Links/relationships to ancillary or related data sets: -------------------- DATA & FILE OVERVIEW -------------------- File list (filenames, directory structure (for zipped files) and brief description of all data files): C_dilaticollis_flat_traits_2018-Nov-27.csv: Life event, length, mass, development, and survival data for families of Cephaloleia aff. dilaticollis reared at different temperatures C_dorsalis_flat_traits_2018-Nov-27.csv: Life event, length, mass, development, and survival data for families of Cephaloleia aff. dorsalis reared at different temperatures C_placida_flat_traits_2018-Nov-27.csv: Life event, length, mass, development, and survival data for families of Cephaloleia placida reared at different temperatures Relationship between files, if important for context: Additional related data collected that was not included in the current data package: If data was derived from another source, list source: If there are there multiple versions of the dataset, list the file updated, when and why update was made: -------------------------- METHODOLOGICAL INFORMATION -------------------------- Description of methods used for collection/generation of data: See manuscript for details: Methods for processing the data: -The data in columns 3-26 (Consecutivo-Fecha_medicion) were recorded in lab notebooks and entered into Excel spreadsheets, when columns 2 and 27 (sheet and Comentarios.revisar.datos.Abril.2017) were added. -Data accuracy was checked again by Christina S. Baer and column 39 (Checked_CB) was added. -The complete dataset for 12 Cephaloleia populations was combined and processed in R. -hatch, pupate, and emerge were coded based on whether there was a value in Fecha_eclosion, Fecha_pupado, or Fecha_nace_adulto, respectively. -dev_time was calculated for individuals who reached adulthood by subtracting Fecha_eclosion fro Fecha_nace_adulto. -Asurv_time was calculated for individuals who reached adulthood by subtracting Fecha_nace_adulto from Fecha_muerte_adulto. -hatch_yrwk, death_yearwk, and emerge_yrwk were calculated to represent Fecha_eclosion, the death date (one of Fecha_muerte_larva, Fecha_muerte_pupa, or Fecha_muerte_adulto), and Fecha_nace_adulto (if applicable) as the year and calendar week number as defined by ISO 8601. The calendar weeks begin on Monday. If the week containing January 1 has >=4 days in the new year, it is week 1 of the new year; otherwise it is the last week of the previous year. -ldays was calculated by subtracting the start of the life stage (Fecha_eclosion) from the either the transition date to the next life stage (Fecha_pupado) or the death date within the stage (Fecha_muerte_larva) -pdays was calculated by subtracting the start of the life stage (Fecha_pupado) from the either the transition date to the next life stage (Fecha_nace_adulto) or the death date within the stage (Fecha_muerte_pupa) -adays was calculated by subtracting the start of the life stage (Fecha_nace_adulto) from the death date within the stage (Fecha_muerte_adulto) -Data for eggs that did not hatch were removed from the raw dataset. -A dataframe for each species was saved as a .csv spreadsheet Software- or Instrument-specific information needed to interpret the data, including software and hardware version numbers: Standards and calibration information, if appropriate: Environmental/experimental conditions: Describe any quality-assurance procedures performed on the data: People involved with sample collection, processing, analysis and/or submission: Gabriel Huertas, Reyder Mesen, and Melissa Sanchez collected and entered the data. Christina S. Baer checked the data entry, processed the raw data, and performed the analyses. -------------------------- DATA-SPECIFIC INFORMATION -------------------------- C_dilaticollis_flat_traits_2018-Nov-27.csv Number of variables: 39 Number of cases/rows: 1508 Variable list, defining any abbreviations, units of measure, codes or symbols used: X: Row number from original dataset containing additional species and eggs that did not produce larvae (Numeric) sheet: Name of original Excel spreadsheet containing data for that population (Character) Consecutivo: Consecutive row number in the original Excel spreadsheet (Numeric) Especie: Beetle species (Categorical) Pareja: Parental pair that produced an individual (Categorical) Localidad: Locality where the parental beetles were collected (Categorical) Temperatura_pareja: Temperature at which the parental pair was kept (Constant, 22°C) Numero_huevo: Consecutive egg number for a parental pair (Numeric) Tratamiento_temperatura_C: Temperature at which an individual was reared (Categorical) Fecha_oviposition: Date the egg was laid (Date:MM/DD/YYYY) Fecha_eclosion: Date the egg hatched (Date:MM/DD/YYYY) Huevo_causa_muerte: Cause of egg death; since these datasets only include eggs that hatched, this is blank for all individuals (Character) Fecha_muerte_larva: Date an individual died as a larva, if applicable (Date:MM/DD/YYYY) Fecha_pupado: Date an indvidual pupated, if applicable (Date:MM/DD/YYYY) Fecha_nace_adulto: Date an individual emerged as an adult, if applicable (Date:MM/DD/YYYY) Tamano_dia_1_mm: Length of one-day-old larva in millimeters (Numeric) Tamano_dia_15_mm: Length of sixteen-day-old larva in millimeters, if applicable. This was originally intended to be the length of fifteen-day-old larvae, but the function for calculating the measurement date was set up as Fecha_eclosion+15, and this mistake was only detected midway through the experiment. (Numeric) Peso_pupa_g: Mass of pupa in grams, if applicable (Numeric) Tamano_pupa_mm: Length of pupa in millimeters, if applicable (Numeric) Fecha_muerte_pupa: Date an individual died as a pupa, if applicable (Date:MM/DD/YYYY) Peso_adulto_g: Mass of adult in grams, if applicable (Numeric) Tamano_adulto_mm: Length of adult in millimeters (Numeric) Sexo_adulto: Sex of adult, if applicable (Categorical) Fecha_muerte_adulto: Date an individual died as an adult, if applicable (Date:MM/DD/YYYY) Notas: Notes about an individual's condition, disappearance, etc., if applicable (Character) Fecha_mediacion: Date for sixteen-day-old larval measurement, if applicable (Date:MM/DD/YYYY) Comentarios.revisar.datos.Abril.2017: Any notes from a review of the data entered in April 2017 (Character) hatch: Whether an individual did (1) or did not (0) hatch (Logical) pupate: Whether an individual did (1) or did not (0) pupate (Logical) emerge: Whether an individual did (1) or did not (0) emerge as an adult (Logical) dev_time: Days from hatching to adult emergence, if applicable (Numeric) Asurv_time: Days an individual survived as an adult, if applicable (Numeric) hatch_yrwk: Year and week number that an individual hatched in (Date) death_yrwk: Year and week number that an individual died in (Date) emerge_yrwk: Year and week number that an individual emerged as an adult in, if applicable (Date) ldays: Days as a larva (Numeric) pdays: Days as a pupa, if applicable (Numeric) adays: Days as an adult, if applicable (Numeric) Checked_CB: Notes from when the record was checked by Christina S. Baer in November 2018 prior to beginning data analysis (Character) Missing data codes: Specialized formats or other abbreviations used: