Phylogenomic placement of a new genus and species of jumping spiders (Araneae: Salticidae: Spartaeini) based on UCE data
Data files
Aug 12, 2025 version files 85.65 MB
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2320loci.genetrees.rename.tre
8.44 MB
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2320loci.partitions
69.85 KB
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Astral.2320loci.rename.tre
4.08 KB
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Concatenate.2320loci.rename.fas
77.12 MB
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ML.2320loci.rename.tre
4.49 KB
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README.md
1.37 KB
Abstract
Recent phylogenomic studies have established a robust backbone relationship for the seven subfamilies of jumping spiders (Salticidae), and identified an enigmatic clade within the subtribe Spartaeina, which significantly contributes to the diversity of the subfamily Spartaeinae. However, the classification of this enigmatic lineage remained unresolved due to the availability of only one male specimen at that time. In this study, we extensively examined additional materials and obtained ultra-conserved element (UCE) data for more putative species of this lineage. The UCE phylogenetic results provided a comprehensive and strongly supported framework for the subtribe Spartaeina, and confirmed that the enigmatic clade is a distinct lineage, separate from genera with similar morphological traits. Coupled with morphological evidence, we describe a new genus, Protaeus gen. nov., and three new species: Protaeus nyarlathotep sp. nov., P. dracosquamus sp. nov., and P. gulliwingus sp. nov. We also revise the classification of three previously misplaced species into this new genus: P. jianfeng (Song & Zhu, 1998) comb. nov. (transferred from Portia), P. forcipiformis (Yang, Liu, Liu & Peng, 2017) comb. nov. (transferred from Spartaeus) and P. shiwandashan (Wang, Mi, Li & Xu, 2024) comb. nov. (transferred from Mintonia). Additionally, we redescribe the male of P. jianfeng and provide a description of the female for the first time. This study enhances our understanding of evolutionary relationships within Spartaeina and underscores the importance of further exploration within this diverse group.
https://doi.org/10.5061/dryad.02v6wwqfp
Phylogenomic insights into the subtribe Spartaeina of jumping spiders (Araneae: Salticidae: Spartaeini): A new genus and species revisions unveiled by UCE data
Description of the data and file structure
Concatenate.2320loci.rename.fas
Description: This is the final concatenated ultra-conserved element (UCE) dataset for 77 species across 2320 UCE loci for phylogenetic analyses.
Note: We recommend viewing this file using Notepad++.
2320loci.partitions
Description: This is the partition file for the concatenated 2320-UCE data matrix "Concatenate.2320loci.rename.fas".
Note: We recommend viewing this file using Notepad++.
ML.2320loci.rename.tre
Description: This is the phylogenetic result from the Maximum Likelihood (ML) analysis.
Note: Tree in newick format, which could be viewed in Notepad++ or FigTree.
2320loci.genetrees.rename.tre
Description: Contains the gene trees of the 2320 UCE loci for the ASTRAL species tree analyses.
Note: These trees are in Newick format, which could be viewed in Notepad++ or FigTree.
Astral.2320loci.rename.tre
Description: This is the phylogenetic result from the ASTRAL analysis.
Note: Tree in newick format, which could be viewed in Notepad++ or FigTree.
