Data from: Longitudinal impacts of habitat fragmentation on Bartonella and hemotropic Mycoplasma dynamics in vampire bats
Data files
Jul 13, 2026 version files 34.04 KB
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BZ_DR_mark_recapture_2022_DRYAD.csv
31.09 KB
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README.md
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Abstract
Habitat fragmentation can have negative impacts on wildlife, including increased risk of infectious disease. To assess spatiotemporal changes in pathogen dynamics in vampire bats (Desmodus rotundus) in response to habitat fragmentation, we used general linear mixed models to investigate the influence of site, year, and tree cover on the prevalence of Bartonella and hemotropic Mycoplasma (hemoplasma) in bats in one large and one small forest fragment in northern Belize across seven years. Bartonella was marginally more prevalent in later years, while year and site differences in hemoplasma infections were driven by a peak in prevalence in the third year of the study in the small fragment. Bartonella prevalence increased with forest loss, but only in the large fragment, whereas hemoplasma prevalence showed a marginal negative response to forest loss. The effects of site, year, and forest loss on infection likelihood varied by pathogen genotype. Neither site nor year affected Bartonella genotypes, but one genotype was positively associated with tree cover. Two hemoplasma genotypes were influenced by year, but with differing trends. One genotype increased with tree cover regardless of site, while another increased with forest loss at the small fragment only. Our work demonstrates that the effects of habitat fragmentation on infection prevalence depended on both the pathogen and specific genotype. Our findings complicate expectations of how habitat fragmentation affects infectious disease dynamics in bats. As such, management practices aimed at mitigating the impacts of infectious diseases in fragmented systems should be tailored to specific pathogens of concern.
Dataset DOI: 10.5061/dryad.02v6wwqg8
Description of the data and file structure
To assess spatiotemporal changes in pathogen dynamics in vampire bats (Desmodus rotundus) in response to habitat fragmentation, we used general linear mixed models to investigate the influence of site, year, and tree cover on the prevalence of Bartonella and hemotropic Mycoplasma (hemoplasma) and each of their genotypes in bats in one large and one small forest fragment in northern Belize across seven years. We included bat identification number as a random effect to account for recaptured bats sampled multiple times during the study and demographic variables such as bat sex, age class, and reproductive status as fixed effects. We also used a cross-correlation analysis of pathogen prevalence across years to quantify the synchrony in infection dynamics. To assess pathogen diversity over time, we used a Chi-squared test to compare the frequencies of each Bartonella and hemoplasma genotype among and within years. We used separate general linear models (GLMs) per pathogen to determine if the total number of genotypes observed infecting a recaptured individual bat across the study duration was influenced by sex, number of captures, minimum age, and whether a bat switched from subadult to adult during its capture history. Lastly, we also used binomial GLMs to determine if the same fixed effects influenced the likelihood a recaptured bat would switch infection status or genotype.
Files and variables
File: BZ_DR_mark_recapture_2022_DRYAD.csv
Description:
Variables
- ID: bat identification number
- date: date of capture
- year: year of capture
- site: site of capture
- sex: bat sex
- age: bat age class
- rep: bat reproductive status
- rrep: sex-specific reproductive status (yes or no for male; pregnant, lactating, or no for female)
- hemo: hemoplasma infection status
- geno: hemoplasma genotype
- gltA: Bartonella infection status
- recap: recaptured or newly captured bat
- band_year: year of first capture
- genogroup: Bartonella genotype
- missing data: NA
Access information
Other publicly accessible locations of the data:
- https://datadryad.org/dataset/doi:10.5061/dryad.hj670t4
- https://datadryad.org/dataset/doi:10.5061/dryad.904kp
- https://datadryad.org/dataset/doi:10.5061/dryad.70rxwdbwb
- https://datadryad.org/dataset/doi:10.5061/dryad.j6q573n8r
- https://doi.org/10.3389/fimmu.2023.1281732
Data were derived from the following sources:
- NA
