Data from: Local adaptation expands genetic variation in the thermal performance of a coastal fish: Implications for ocean warming
Data files
Sep 17, 2026 version files 241.85 KB
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d11.wt.csv
108.72 KB
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mortality.csv
81.25 KB
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ped.wt.d11.csv
22.72 KB
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pedigree.morts.csv
24.48 KB
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README.md
4.67 KB
Abstract
Dataset DOI: 10.5061/dryad.0k6djhbhp
Description of the data and file structure
The attached files contain data on survival and growth of larvae of California Grunion within laboratory experiments.
Files with data on growth and mortality are accompanied by pedigree files that were used to construct a relatedness matrix for all families in the study. Relatedness information was then used in the main analyses estimating genetic variation in thermal reaction norms for both growth and mortality
Files and variables
File: d11.wt.csv
Description: Data on growth of larvae (dry mass at the end of the experiment)
Variables
- Spawning.date: Date that eggs were fertilized
- Hatch.Date: Date of hatching
- Date: Date of measurements
- Year: Experiment was repeated across multiple years
- Month.S: Number of months since January 1
- Run: numbered spawning run each year
- Experiment.#: Experiments were given a number each year
- Expt: Letter designation for experiments
- Experiment.Type: Main explanatory variable
- Moon: Grunion spawn during new or full moons
- Tank: Identifier for tank location
- Treatment: Target temperature (degrees Celsius)
- pH.Average: pH values (if measured)
- Avg.Temp: average temperature (degrees Celsius)
- DPH: days post hatching
- Location: location where gametes were collected
- Male: identifier for males (unique for each location and experiment)
- Female: identifier for females (unique for each location and experiment)
- Aluminum.Foil: pre weight of foil that held groups of larvae. weight in grams
- Wet.Wt: wet weight of larvae and foil, in grams
- Dry.Wt: dry weight of larvae and foil, in grams
- Count: number of larvae weighed
- foil.change: difference in weight of foil without larvae before and after drying. was measured on foil without larvae, but weight loss was negligible.
- mass.mg: mean mass of larva in milligrams
- Comments: comments
- fam: location family came from
- T2: squared value of average temperature
- F.run: identifier that is a combination of family and date of run
- sire: unique identifier for sire. matches variable in pedigree file
- dam: unique identifier for dam. matches variable in pedigree file
- animal: unique identifier for larvae from same family and tank. matches variable in pedigree file
File: ped.wt.d11.csv
Description: pedigree for weight measurements
Variables
- animal: unique identifier for larvae from same family and tank. matches variable in weight file
- sire: unique identifier for sire. matches variable in weight file
- dam: unique identifier for dam. matches variable in weight file
File: mortality.csv
Description: data on proportion of larvae remaining and estimated mortality rates
Variables
- Spawning.date: Date that eggs were fertilized
- Hatch.date: Date that embryos were hatched
- Month.S: Number of months since January 1
- Year: year
- h.Month: month of hatching
- Run: spawning run numbered within each year
- Experiment.#: spawning run numbered within each year
- Expt: letter designation for experiment
- Experiment.Type: main explanatory variable of interest
- Location: location where gametes were collected
- Male: identifier for males (unique for each location and experiment)
- Female: identifier for females (unique for each location and experiment)
- Tank.no: identifier for tank location
- Treatment: target temperature in degrees Celsius
- pH.Average: mean pH, if measured
- Avg.temp: average temperature in degrees Celsius
- mort.rate: estimated rate of mortality (change in the natural log of the proportion of larvae remaining over time)
- survival: Proportion remaining at the end of the experiment
- sire: unique identifier for sire. matches variable in pedigree file
- dam: unique identifier for dam. matches variable in pedigree file
- animal: unique identifier for larvae from same family and tank. matches variable in pedigree file
File: pedigree.morts.csv
Description: pedigree for mortality measurements
Variables
- animal: unique identifier for larvae from same family and tank. matches variable in mortality file
- sire: unique identifier for sire. matches variable in mortality file
- dam: unique identifier for dam. matches variable in mortality file
Code/software
data are csv files
R scripts describing the analyses are attached
Access information
Other publicly accessible locations of the data:
- NA
Data was derived from the following sources:
- NA
Offspring from three different source populations were reared in a common environment. Adults from each population were spawned in an experimental breeding design that created families of offspring, including different types of relatives (full siblings, maternal half siblings, paternal half siblings). Replicates from each family were reared across a range of four experimental temperatures.
