Data from: Success of coastal sage scrub restoration is influenced by local adaptations of shrub species
Data files
Jul 27, 2026 version files 1.65 MB
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All_Mortality_Surveys.csv
244.47 KB
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All_Size_Surveys.csv
1.22 MB
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ChlorophyllContent.csv
7.08 KB
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DN_2021_GE_data.csv
114.22 KB
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DN_WaterPotentialARTCAL2022.csv
5.56 KB
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DroughtNetERIFAS2021Porometer.csv
3.49 KB
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DroughtNetGasExMay2022RE.csv
38.62 KB
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DroughtNetSALMELWaterPotential2021.csv
4.44 KB
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DroughtNetSoilMoisture.csv
6.28 KB
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README.md
12.41 KB
Abstract
We compared the performance of four dominant Southern California shrub species grown from seed sourced from either coastal (mean 17.11°C) or inland (mean 19.28°C) populations in a coastal common garden site under three levels of water availability. The goal was to test whether inland populations had higher survival, growth, and reproduction than coastal populations when experiencing the extreme highs and lows of water availability currently observed inland that mimic possible future climate conditions in coastal regions.
Plants of most species generally grew less and had fewer flowers with water reduction, but neither flowering nor growth were strongly or consistently affected by seed source. Within our coastal common garden site, survivorship of coastal-sourced plants was higher than that for inland-sourced plants. The effect of seed source interacted with water treatment to influence survivorship of all species, such that the negative effect of decreased water was more pronounced for inland-sourced plants. This effect might be explained by the physiological trait measurements which indicated stomatal conductance of Eriogonum and Salvia was higher for inland-sourced populations, suggesting increased water use.
Provenance for this README
- File name: README_dn_shrub.txt
- Author: Sarah Kimball
- Date created: 2026-07-21
- Date modified: 2026-07-21
Dataset Version and Release History
- Current Version:
- Number: 1.0.0
- Persistent identifier: DOI: DOI:10.5061/dryad.0vt4b8hdn
Dataset Attribution and Usage
- Dataset Title: Data for the article "Success of coastal sage scrub restoration is influenced by local adaptations of shrub species"
- Persistent Identifier: DOI: DOI:10.5061/dryad.0vt4b8hdn
- Dataset Contributors:
- Creators: Sarah Kimball, Moises Perea-Vega, Julie Coffey, Priscilla Ta, Katharina T. Schmidt, Kailen Mooney, and Megan Lulow
- License: Use of these data is covered by the following license:
- Title: CC0 1.0 Universal (CC0 1.0)
- Specification: https://creativecommons.org/publicdomain/zero/1.0/; the authors respectfully request to be contacted by researchers interested in the re-use of these data so that the possibility of collaboration can be discussed.
Contact Information
- Name: Sarah Kimball
- Affiliations: Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697
- ORCID ID: https://orcid.org/0000-0003-3789-4741
- Email: skimball@uci.edu
Additional Dataset Metadata
Dates and Locations
- Dates of data collection: Field data collected between March 2020 and May 2022
- Geographic location of data collection: Fieldwork conducted at the Precipitation and Seed Source Manipulation Experiment at the UC Irvine Ecological Preserve, Orange County, CA, USA (see publication for more details)
Methodological Information
- Methods of data collection/generation: see manuscript for details
Data and File Overview
Summary Metrics
- File count: 9
- Total file size: 1.7 MB
- Range of individual file sizes: 3 KB - 1.2 MB
- File formats: .csv
Table of Contents
- All_Mortality_Surveys.csv
- All_Size_Surveys.csv
- ChlorophyllContent.csv
- DN_2021_GE_data.csv
- DN_WaterPotentialARTCAL2022.csv
- DroughtNetERIFAS2021Porometer.csv
- DroughtNetGasExMay2022RE.csv
- DroughtNetSALMELWaterPotential2021.csv
- DroughtNetSoilMoisture.csv
File Details
Details for: All_Mortality_Surveys.csv
- Description: a comma-delimited file containing two years of plant survival data
- Format(s): .csv
- Size(s): 244 KB
- Dimensions: 2751 rows x 18 columns
- Variables:
- Block: Experimental block, numbered 1 to 4, according to the location of study plots within the site
- Plot: Experimental plot, numbered 1 to 9, within each block. The combination of block and plot is a unique identifier.
- Plant_Number: Individual plant number, numbered 1-72, within each experimental plot.
- Treatment: precipitation treatment; exclusion = less than ambient; ambient = ambient; irrigation = water added
- Species_Code: the 6-letter abbreviation for the species of plant. ARTCAL = Artemisia california; ENCCAL = Encelia california; ERIFAS = Eriogonum fasciculatum; SALMEL = Salvia mellifera.
- Seed_Source: where the seeds were collected. Mesic = coastal; xeric = inland.
- Planting: cohort in which plants were added to the site
- PositionID: location within the plot where plants were planted.
- Columns I through R: the status of the plant where A=alive; D=dead; M=missing; NA = no data collected
- Note: in all cells, NA = no data collected
Details for: All_Size_Surveys.csv
- Description: a comma-delimited file containing two years of shrub growth and reproductive counts
- Format(s): .csv
- Size(s): 1.2 MB
- Dimensions: 13425 rows x 18 columns
- Variables:
- Survey_Season: when the data were collected
- Block: Experimental block, numbered 1 to 4, according to the location of study plots within the site
- Plot: Experimental plot, numbered 1 to 9, within each block. The combination of block and plot is a unique identifier. *Treatment: precipitation treatment; exclusion = less than ambient; ambient = ambient; irrigation = water added
- Seed_Source: where the seeds were collected. Mesic = coastal; xeric = inland.
- Group_Number: team collecting the data
- Plant_Number: Individual plant number, numbered 1-72, within each experimental plot.
- PositionID: location within the plot where plants were planted.
- Planting: cohort in which plants were added to the site
- Species_Code: the 6-letter abbreviation for the species of plant. ARTCAL = Artemisia california; ENCCAL = Encelia california; ERIFAS = Eriogonum fasciculatum; SALMEL = Salvia mellifera.
- Height_cm: Height in cm
- Width_cm: Width at widest point in cm
- MortalityStatus: A=alive; D=dead; M=missing
- DripRow: 0 = not in the row where water drips off the structures; 1 = located in the row where water drips off structures
- BufferZone: 0 = not at the edge of the plot; 1 = at the edge of the plot
- Number_Rprdt: number of reproductive structures
- Phenology: phenological stage of development, where V=vegetative and F= flowering or fruiting
- Number_Flowers: number of flowers
- Note: in all cells, NA = no data collected
Details for: ChlorophyllContent.csv
- Description: a comma-delimited file containing the chlorophyll content of shrub leaves as measured with a SPAD meter
- Format(s): .csv
- Size(s): 7 KB
- Dimensions: 124 rows x 9 columns
- Variables:
- Page #: the page of raw data
- Date: date when data were collected
- Team: initials of team collecting data
- Block: Experimental block, numbered 1 to 4, according to the location of study plots within the site
- Water_Treatment: precipitation treatment; drought = less than ambient; ambient = ambient; irrigated = water added
- Plot: Experimental plot, numbered 1 to 9, within each block. The combination of block and plot is a unique identifier.
- Region: where the seeds were collected. Mesic = coastal; xeric = inland.
- Species: the species of plant measured, ARTCAL = Artemisia california
- ChlorophyllContent: SPAD value
- Note: in all cells, NA = no data collected
Details for: DN_2021_GE_data.csv
- Description: a comma-delimited file containing measurements of gas exchange, as measured with a LiCor 6400 infrared gas analyzer
- Format(s): .csv
- Size(s): 114 KB
- Dimensions: 162 rows x 66 columns
- Variables:
- Date: day data were collected
- Machine: the specific instrument used
- Block: Experimental block, numbered 1 to 4, according to the location of study plots within the site
- Plot: Experimental plot, numbered 1 to 9, within each block. The combination of block and plot is a unique identifier.
- Treatment: precipitation treatment; drought = less than ambient; ambient = ambient; irrigated = water added
- Region: where the seeds were collected. Mesic = coastal; xeric = inland.
- Species: the 6-letter abbreviation for the species of plant. ENCCAL = Encelia california; SALMEL = Salvia mellifera.
- Number: Individual plant number, numbered 1-72, within each experimental plot.
- Logs: the number of times the exact value was logged by the IRGA
- Individual: unique identifier for each plant measured
- Obs: the observation number
- Columns L through BN: output from the Licor 6400 infra-red gas analyzer. See manual for details.
- Missing data codes: "NA" is entered for missing data
Details for: DN_WaterPotentialARTCAL2022.csv
- Description: a comma-delimited file containing water potential measurements of shrubs, as measured with a PMS pressure bomb
- Format(s): .csv
- Size(s): 6 KB
- Dimensions: 84 rows x 11 columns
- Variables:
- Page: the page number on the raw datasheet
- Date: day data collected
- Observers: team collecting data
- Block: Experimental block, numbered 1 to 4, according to the location of study plots within the site
- Plot: Experimental plot, numbered 1 to 9, within each block. The combination of block and plot is a unique identifier.
- Region: where the seeds were collected. Mesic = coastal; xeric = inland.
- Water_Treatment: precipitation treatment; drought = less than ambient; ambient = ambient; irrigated = water added
- Species_Code: the 6-letter abbreviation for the species of plant. ARTCAL = Artemisia california
- Time: time of measurement
- Pressure: pressure in bars
- WaterPotentialMPa: pressure in MPa
- Missing data: empty cells; NA
Details for: DroughtNetERIFAS2021Porometer.csv
- Description: a comma-delimited file containing the stomatal conductance values of shrubs, as measured with a Decagon promoter.
- Format(s): .csv
- Size(s): 3 KB
- Dimensions: 61 rows x 9 columns
- Variables:
- Date: day of measurement
- Observer(s): initials of observers
- Plot: Experimental plot, numbered 1 to 9, within each block. The combination of block and plot is a unique identifier.
- Block: Experimental block, numbered 1 to 4, according to the location of study plots within the site
- Water: precipitation treatment; drought = less than ambient; ambient = ambient; irrigated = water added
- Source_Population: where the seeds were collected. Mesic = coastal; xeric = inland.
- Plant Measurement: stomatal conductance value
- Species: ERIFAS = Eriogonum fasciculatum
- In all columns, NA = missing data
Details for: DroughtNetGasExMay2022RE.csv
- Description: a comma-delimited file containing measurements of gas exchange, as measured with a LiCor 6400 infrared gas analyzer
- Format(s): .csv
- Size(s): 39 KB
- Dimensions: 82 rows x 66 columns
- Variables:
- Block: Experimental block, numbered 1 to 4, according to the location of study plots within the site
- Plot: Experimental plot, numbered 1 to 9, within each block. The combination of block and plot is a unique identifier.
- Water Treatment: precipitation treatment; drought = less than ambient; ambient = ambient; irrigated = water added
- Region: where the seeds were collected. Mesic = coastal; xeric = inland.
- Species Code: the 6-letter abbreviation for the species of plant. ENCCAL = Encelia california; SALMEL = Salvia mellifera. *Individual: unique identifier for each plant measured
- Obs: the observation number
- Columns H through BN: output from the Licor 6400 infra-red gas analyzer. See manual for details.
- Missing data codes: "NA" is entered for missing data
Details for: DroughtNetSALMELWaterPotential2021.csv
- Description: a comma-delimited file containing the water potential value as measured with a pressure bomb
- Format(s): .csv
- Size(s): 4 KB
- Dimensions: 14 rows x 10 columns
- Variables:
- Page: the page number on the raw datasheet
- Date: day data collected
- Observer: team collecting data
- Block: Experimental block, numbered 1 to 4, according to the location of study plots within the site
- Plot: Experimental plot, numbered 1 to 9, within each block. The combination of block and plot is a unique identifier.
- Source_pop: where the seeds were collected. Mesic = coastal; xeric = inland.
- Water: precipitation treatment; drought = less than ambient; ambient = ambient; irrigated = water added
- Species_Code: the 6-letter abbreviation for the species of plant. ARTCAL = Artemisia california
- Time: time of measurement
- Pressure: pressure in bars
- NA refers to missing data in all columns
Details for: DroughtNetSoilMoisture.csv
- Description: a comma-delimited file containing the water content of the soil, as measured with a Hydrosense.
- Format(s): .csv
- Size(s): 6 KB
- Dimensions: 109 rows x 11 columns
- Variables:
- Page: the page number on the raw datasheet
- Date: day data collected
- Observer: team collecting data
- Plot: Experimental plot, numbered 1 to 9, within each block. The combination of block and plot is a unique identifier.
- Block: Experimental block, numbered 1 to 4, according to the location of study plots within the site
- Water: precipitation treatment; drought = less than ambient; ambient = ambient; irrigated = water added
- Source Population: where the seeds were collected. Mesic = coastal; xeric = inland.
- Location: whether measurement was collected in the shrub canopy or in the open
- VWC: volumetric water content, %
- Periodicity, period
