Data from: Ecological and behavioral implications of multiple paternity in the Smooth-fronted caiman in French Guiana
Data files
Apr 24, 2025 version files 13.28 KB
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Data_Smooth-fronted_caiman_French-Guiana.csv
7.72 KB
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Microsat_details_caimans_FrenchGuiana.csv
915 B
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ReadMe_Data_Smooth-fronted_caiman.txt
1.47 KB
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README.md
3.17 KB
Abstract
The identification of genetic mating systems in a variety of species has challenged the previous view on animal mating patterns over the past decade, resulting in the identification of multiple paternity across all vertebrate classes. In crocodylians, all species that have been investigated demonstrate multiple paternity, which may represent the ancestral state of the clade. The Smooth-fronted caiman, Paleosuchus trigonatus, is one of the last species whose genetic mating system has yet to be investigated. In this study, we analyzed genetic samples of the smooth-fronted caiman in French Guiana, a secretive species that is difficult to observe in the wild. Scute samples were taken from three populations and five groups of neonates that hatched shortly before. Microsatellite markers were used to infer the minimum number of fathers that sired each clutch. Our results clearly show that multiple paternity was common, with 60% of the sampled group of neonates showing a minimum of two sires. The potential ecological and behavioral implications of this finding are discussed, as well as recommendations for future research avenues to elucidate this cryptic species’ mating behavior and environmental constraints.
Dataset DOI: 10.5061/dryad.2fqz6131b
Description of the data and file structure
This is supporting data for the Article: Ecological and behavioral implications of multiple paternity in the Smooth-fronted caiman in French Guiana, published in Ecology and Evolution (https://doi.org/10.1002/ece3.71337)
Authors: Carolin Dittrich, Rosanna Mangione, Olivier Marquis, Eva Ringler, Jérémy Lemaire
The data sampling occurred between 2016 and 2020 in three populations in French Guiana (see Fig.1).
We provide the micro-satellite data for each of the eight loci with Locus name according to Muniz et al. 2019.
The data tables are provided in delimiter-separated csv format, explanations are given below.
All details on data processing can be found in the manuscript.
The details for the microsatellites can be found in the dataset Microsat_details_caimans_FrenchGuiana.csv
The set shows the primers that were sequenced together in a multiplex approach (SET A and B). Given are primer names, the fluorescent dye used, primer sequences, repeat motif per primer binding site, the range of allele sizes, and the annealing temperature per primer (modified after Muniz et al. 2019).
Details on other files below.
Files and variables
File: Microsat_details_caimans_FrenchGuiana.csv
Description: detailed description of the chosen micro satellites for parental analysis, primer sequences from Muniz, FdL., Ximenes, A. M., Bittencourt, P. S., Hernández-Rangel, S. M., Campos, Z., Hrbek, T. and Farias, I. P. (2019). Detecting population structure of Paleosuchus trigonatus (Alligatoridae: Caimaninae) through microsatellites markers developed by next generation sequencing. Molecular Biology Reports, 46(2), 2473-2484. https://doi.org/10.1007/s11033-019-04709-7
Variables
- SET: A or B, sequences that were run together on the sequenzer
- primer name: according to Muniz et al. 2019
- dye: fluorescent dye used
- primer sequence:
- repeat motif: repeat motif per primer binding site
- size range: size range of allel sizes
- TA: annealing temperature per primer in °C
File: ReadMe_Data_Smooth-fronted_caiman.txt
Description: description of files in txt format
File: Data_Smooth-fronted_caiman_French-Guiana.csv
Description: data on smooth fronted caiman samples obtained between 2016 and 2020 in three populations in French Guiana
Variables
- ID: lab ID
- Locus: loci with both alleles per locus (name according to Muniz et al. 2019)
- sex: sex of the sampled individual, either not available (NA), male (M) or female (F)
- status: age status of each individual, either juvenile from that specific sampling year or neonate (JUV), subadult (SUB) or adult (A)
- year: year of sampling
- location: location of sampling, names given in full
- comment: association of a group of hatchlings to a nest, potential females for a specific nest location
