Data from: Longitudinal serum proteomic profiling of nonhuman primates exposed to total-body gamma-radiation and treated with BBT-059
Data files
Jul 10, 2026 version files 402.44 GB
-
AC1617_TimsTOF_DIA_protein_Report.csv
2.27 MB
-
BBT_W_Rad_Proteomics_553-560.zip
15.63 GB
-
BBT_W_Rad_Proteomics_561-570.zip
15.58 GB
-
BBT_W_Rad_Proteomics_571-580.zip
13.26 GB
-
BBT_W_Rad_Proteomics_581-590.zip
13.20 GB
-
BBT_W_Rad_Proteomics_591-600.zip
15.42 GB
-
BBT_W_Rad_Proteomics_601-620.zip
16.91 GB
-
BBT_W_Rad_Proteomics_621-630.zip
13.44 GB
-
BBT_W_Rad_Proteomics_631-640.zip
9.52 GB
-
BBT_W_Rad_Proteomics_641-650.zip
11.04 GB
-
BBT_W_Rad_Proteomics_651-660.zip
12.90 GB
-
BBT_W_Rad_Proteomics_661-670.zip
8.85 GB
-
BBT_W_Rad_Proteomics_671-677.zip
7.71 GB
-
BBT_W_Rad_Proteomics_683-690.zip
10.35 GB
-
BBT_W_Rad_Proteomics_691-710.zip
22.14 GB
-
BBT_W_Rad_Proteomics_713-720.zip
9.30 GB
-
BBT_W_Rad_Proteomics_721-730.zip
8.32 GB
-
BBT_W_Rad_Proteomics_732-739.zip
9.53 GB
-
BBT_W_Rad_Proteomics_742-750.zip
11.01 GB
-
BBT_W_Rad_Proteomics_751-760.zip
8.29 GB
-
BBT_W_Rad_Proteomics_761-768.zip
9.47 GB
-
BBT_W_Rad_Proteomics_771-780.zip
8.36 GB
-
BBT_W_Rad_Proteomics_781-790.zip
8.41 GB
-
BBT_W_Rad_Proteomics_791-800.zip
9.49 GB
-
BBT_W_Rad_Proteomics_801-810.zip
11.69 GB
-
BBT_W_Rad_Proteomics_811-820.zip
8.19 GB
-
BBT_W_Rad_Proteomics_821-830.zip
7.93 GB
-
BBT_W_Rad_Proteomics_831-840.zip
11.51 GB
-
BBT_W_Rad_Proteomics_841-850.zip
7.21 GB
-
BBT_W_Rad_Proteomics_851-860.zip
8.37 GB
-
BBT_W_Rad_Proteomics_861-880.zip
14.24 GB
-
BBT_W_Rad_Proteomics_881-898.zip
15.40 GB
-
BBT_W_Rad_Proteomics_902-920.zip
15.23 GB
-
BBT_W_Rad_Proteomics_921-930.zip
11.06 GB
-
BBT_W_Rad_Proteomics_931-940.zip
10.33 GB
-
BBT_W_Rad_Proteomics_951-962.zip
13.16 GB
-
README.md
4.07 KB
Abstract
Several radiation medical countermeasures (MCMs) are currently approved by the United States Food and Drug Administration for the mitigation of hematopoietic acute radiation syndrome (H-ARS). Continued development of additional candidates remains a priority to enhance force protection capabilities, combat readiness, and operational preparedness in nuclear/radiological threat environments. One such candidate under development is BBT-059, a long-acting PEGylated interleukin-11 (IL-11) analog with known hematopoietic-promoting and anti-apoptotic properties. BBT-059 is under advanced development as a potential radiation MCM for H-ARS and has been shown to improve survival in lethally irradiated murine models; however, its proteomic responses following irradiation have not been fully characterized in nonhuman primates (NHPs). In this study, NHPs exposed to 4 Gy total-body gamma-radiation were subsequently treated with a single subcutaneous dose of either 37.5 or 75 µg/kg of BBT-059 at 24 h post-irradiation, and longitudinal serum proteomic profiling was performed using a mass spectrometry (MS)-based approach. Proteomic changes were compared to baseline levels to comprehensively identify time-dependent changes induced by irradiation and BBT-059 administration. These analyses revealed changes in proteins related to inflammation, innate immune activation, as well as hematological and platelet-related functions, which peaked at 2 and 4 d and gradually decreased to near baseline levels by the end of the study. Pathway enrichment analysis identified consistent activation of neutrophil degranulation, platelet degranulation, insulin-like growth factor transport, and calcium signaling pathways.
Dataset DOI: 10.5061/dryad.2v6wwq02f
Description of the data and file structure
The primary objective of this study was to investigate the proteomic profile of BBT-059 in NHPs exposed to a sublethal 4 Gy dose of total-body cobalt-60 (60Co) gamma-radiation. A total of 14 NHPs were enrolled, with eight animals randomly assigned to the 37.5 µg/kg treatment group and six to the 75 µg/kg treatment group. A single subcutaneous (sc) dose of BBT-059 was administered to each animal immediately after the 0 h post-drug administration blood collection timepoint, which occurred 24 h post-irradiation. The dosing volume was adjusted by body weight and did not exceed 1.33 mL. Animals were monitored for 60 days post-irradiation. Serum was separated for proteomic investigations and was analyzed using a NanoUPLC-MS approach.
Files and variables
File: AC1617_TimsTOF_DIA_protein_Report.csv
Description: This file includes sample-wise results. Protein abundances were generated using top-N aggregation for label-free quantification followed by cross-run normalization. Columns E: LL correspond to the 320 samples attained in this study.
Variables
- PG.ProteinGroups: Group identifier assigned by software.
- PG.Genes: Gene symbol.
- PG.ProteinDescriptions: Full protein description.
- PG.ProteinNames: Common protein name.
- Columns E: LL correspond to each sample.
File: BBT_W_Rad_Proteomics zip files
Raw mass spectrometry data were uploaded in batches and are provided as compressed .zip files containing the Bruker .d acquisition directories.
- BBT_W_Rad_Proteomics_553-560.zip
- BBT_W_Rad_Proteomics_561-570.zip
- BBT_W_Rad_Proteomics_571-580.zip
- BBT_W_Rad_Proteomics_581-590.zip
- BBT_W_Rad_Proteomics_591-600.zip
- BBT_W_Rad_Proteomics_601-620.zip
- BBT_W_Rad_Proteomics_621-630.zip
- BBT_W_Rad_Proteomics_631-640.zip
- BBT_W_Rad_Proteomics_641-650.zip
- BBT_W_Rad_Proteomics_651-660.zip
- BBT_W_Rad_Proteomics_661-670.zip
- BBT_W_Rad_Proteomics_671-677.zip
- BBT_W_Rad_Proteomics_683-690.zip
- BBT_W_Rad_Proteomics_691-710.zip
- BBT_W_Rad_Proteomics_713-720.zip
- BBT_W_Rad_Proteomics_721-730.zip
- BBT_W_Rad_Proteomics_732-739.zip
- BBT_W_Rad_Proteomics_742-750.zip
- BBT_W_Rad_Proteomics_751-760.zip
- BBT_W_Rad_Proteomics_761-768.zip
- BBT_W_Rad_Proteomics_771-780.zip
- BBT_W_Rad_Proteomics_781-790.zip
- BBT_W_Rad_Proteomics_791-800.zip
- BBT_W_Rad_Proteomics_801-810.zip
- BBT_W_Rad_Proteomics_811-820.zip
- BBT_W_Rad_Proteomics_821-830.zip
- BBT_W_Rad_Proteomics_831-840.zip
- BBT_W_Rad_Proteomics_841-850.zip
- BBT_W_Rad_Proteomics_851-860.zip
- BBT_W_Rad_Proteomics_861-880.zip
- BBT_W_Rad_Proteomics_881-898.zip
- BBT_W_Rad_Proteomics_902-920.zip
- BBT_W_Rad_Proteomics_921-930.zip
- BBT_W_Rad_Proteomics_931-940.zip
- BBT_W_Rad_Proteomics_951-962.zip
Description: Each .zip file includes the vendor-generated Bruker LC-MS raw data and acquisition method files for each run that can be opened and reprocessed with Bruker-compatible mass spectrometry software.
Files required for reprocessing include:
- analysis.tdf: contains the metadata, acquisition information, retention times, ion mobility, and other information needed to interpret the data.
- analysis.tdf.bin: contains binary intensity data.
Other supporting files include:
- chromatography-data.sqlite/chromatography-data.sqlite-journal: chromatography/acquisition metadata.
- sampleinfo.xml: sample metadata.
- Methods folders include files such as submethods.xml, hystar.method, diasettings.diasqlite, prmSettings.prmsqlite, etc., that contain specific information regarding acquisition and instrument settings.
- Backup folders include backup files to preserve data integrity.
Code/software
Excel is needed to view the protein report, while Bruker software or a compatible third-party software or tool is needed to open all other files.
