Data from: Climate change in the coastal ocean: shifts in pelagic productivity and regionally diverging dynamics of coastal ecosystems
Data files
May 27, 2026 version files 1.02 MB
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Barnacle_Recruitment_Data_for_Long-Term_Analyses_cleaned.csv
1.01 MB
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README.md
10.21 KB
Abstract
Climate change has led to intensification and poleward migration of the Southeastern Pacific Anticyclone, forcing diverging regions of increasing, equatorward and decreasing, poleward coastal phytoplankton productivity along the Humboldt Upwelling Ecosystem, and a transition zone around 31° S. Using a 20-year dataset of barnacle larval recruitment and adult abundances, we show that striking increases in larval arrival have occurred since 1999 in the region of higher productivity, while slower but significantly negative trends dominate poleward of 30° S, where years of recruitment failure are now common. Rapid increases in benthic adults result from fast recruitment–stock feedbacks following increased recruitment. Slower population declines in the decreased productivity region may result from aging but still reproducing adults that provide temporary insurance against population collapses. Thus, in this region of the ocean where surface waters have been cooling down, climate change is transforming coastal pelagic and benthic ecosystems through altering primary productivity, which seems to propagate up the food web at rates modulated by stock–recruitment feedbacks and storage effects. Slower effects of downward productivity warn us that poleward stocks may be closer to collapse than current abundances may suggest.
Raw data belonging to
Navarrete, S. A., Barahona, M., Weidberg, N., & Broitman, B. R. (2022). Climate change in the coastal ocean: shifts in pelagic productivity and regionally diverging dynamics of coastal ecosystems. Proceedings of the Royal Society B: Biological Sciences, 289: 20212772.
GENERAL INFORMATION
Title of Dataset: Data from: Climate change in the coastal ocean: shifts in pelagic productivity and regionally diverging dynamics of coastal ecosystems
Associated publication: Navarrete et al. 2022. Proceedings of the Royal Society B: Biological Sciences, 289: 20212772.
Dryad DOI: https://doi.org/10.5061/dryad.3bk3j9km9
Corresponding author: Sergio A. Navarrete
- Email: snavarrete@bio.puc.cl
- ORCID / 0000-0003-4021-3863
Dataset authorship: Sergio A. Navarrete; Bernardo R. Broitman
- Authors listed in associated publication.
Date of data collection: From 1997-2019
- 22 years of monthly larval recruitment.
Geographic location of data collection: Central-northern coast of Chile, approximately 29°S to 34°S.
- Eleven primary sites; subset of a broader 19-site monitoring network.
Funding sources: Andrew Mellon Foundation grants to SAN
SHARING / ACCESS INFORMATION
License / restrictions: CC0 license waiver
Publication using the data: Navarrete et al. 2022. Proceedings of the Royal Society B.
Other publicly accessible locations: Dryad Digital Repository
Recommended citation: Navarrete, S. A., Barahona, M., Weidberg, N., & Broitman, B. R. 2022. Data from: Climate change in the coastal ocean: shifts in pelagic productivity and regionally diverging dynamics of coastal ecosystems. Dryad Digital Repository.
DATA & FILE OVERVIEW
File included: Barnacle_Recruitment_Data_for_Long-Term_Analyses_cleaned.csv
- Comma-separated values file containing long-term barnacle recruitment records.
Number of rows: 12,930 data rows
Number of variables: 24 columns
General structure: Each row represents a recruitment-plate observation associated with site, date, plate identifier, deployment duration, taxonomic counts, geographic region, and period classification.
Relationship between files: Single data file.
- No separate ancillary file included in the current data package.
METHODOLOGICAL INFORMATION
Data collection method: Larval recruitment was monitored using 10 × 10 cm Plexiglas plates covered with SafetyWalk 3M.
- Method from associated publication.
Study system: Rocky-shore intertidal barnacles, primarily Jehlius cirratus and Notochthamalus scabrosus.
Study sites: Eleven primary sites along 29-34°S; subset of 19 exposed rocky-shore sites monitored over multiple years.
Analytical standardization: Because plate exposure duration varied, recruitment rates used in the associated publication were standardized by days in the field and expressed as individuals per 100 cm2 per day.
Exposure-duration filter used in paper: Collectors exposed for fewer than 15 days or more than 45 days were excluded from the main analyses.
- The uploaded CSV includes both records within and outside this analytical window.
DATA-SPECIFIC INFORMATION FOR: Barnacle_Recruitment_Data_for_Long-Term_Analyses_cleaned.csv
Missing data codes: Empty cells
- Empty cells represent missing, unavailable, not recorded, or not applicable values.
Zero values: 0
- Numeric zero values should be interpreted as observed counts of zero individuals, cyprids, recruits, or other recorded categories. Zeros are distinct from empty cells.
Exposure range check: 11,514 records within 15-45 days; 1,416 outside this range; 35 with days < 15; 1,381 with days > 45.
- Relevant for reproducing the associated publication.
Data dictionary
| Column | Entry | Value / allowed values | Unit | Explanation | Remark |
|---|---|---|---|---|---|
| A | site | Text site code | Sampling site code. | ||
| B | date | Date-like text, e.g. 20-Jun-19 | date | Sampling date associated with the recruitment plate record. | Primary temporal field. |
| C | year | 1997-2019 | year | Calendar year associated with date. | |
| D | month | Text month abbreviation | Text month abbreviation associated with date. Most values use lowercase Spanish-style abbreviations such as ene, feb, mar, abr, may, jun, jul, ago, sep, oct, nov, dic. | ||
| E | monthn | 1-12 | month number | Numeric month associated with date. | |
| F | dayn | 1-31 | day of month | Day of the month associated with date. | |
| G | plate | Generally 1-5 | plate ID | Recruitment plate number or replicate identifier. | Some cells are empty values. |
| H | days | 11-175 | days | Number of days between deployment and retrieval of the recruitment plate. | Paper analyses used 15-45 days. |
| I | cypris | Numerical count | count | Count of cyprids Chthamalids not assigned to species | |
| J | cypris_jeh | Numerical count | count | Count of cyprids assigned to Jehlius cirratus. | Inferred from Jehlius = cypris_jeh + j_cirratus; confirm. |
| K | cypris_notho | Numerical count | count | Count of cyprids assigned to Notochthamalus sacbrosus. | Inferred from Noto = cypris_notho + n_scabrosus; confirm. |
| L | cypris_bal | Numerical count | count | Count of cyprids assigned to balanids species. | |
| M | j_cirratus | Numerical count | count | Count of post-settlement recruits or spat assigned to Jehlius cirratus. | |
| N | n_scabrosus | Numerical count | count | Count of post-settlement recruits or spat assigned to Notochthamalus scabrosus. | |
| O | Jehlius | Numerical count | count | Total count assigned to Jehlius cirratus. combine cyprid-stage individuals and post-settlement recruits/spat. | Jehlius = cypris_jeh + j_cirratus. |
| P | Noto | Numerical count | count | Total count assigned to Notochthamalus scabrosus; combine cyprid-stage individuals and post-settlement recruits/spat. | Noto = cypris_notho + n_scabrosus. |
| Q | n_flosculus | Numerical count | count | Count of individuals assigned to Notobalanus flosculus. | |
| R | b_laevis | Numerical count | count | Count of individuals assigned to Balanus laevis. | |
| S | NI | Numerical count | count | Count of unidentified individuals. | |
| T | Source | Data; DATA | Internal source or data-origin flag. | ||
| U | ChthaRec | Numerical count | count | Total Chthamalids recruitment count. | ChthaRec = Jehlius + Noto. |
| V | period | PRE; POS | Period classification. | Likely before/after 2007 breakpoint used in the associated publication. | |
| W | LAT | Decimal latitude | decimal degrees | Latitude of the sampling site. | |
| X | Region | North; Centr; South | Geographic region category used to classify sites along the latitudinal gradient. | Corresponds broadly to equatorward/northern, central/transition, and poleward/southern regions. |
See methods in
[1] Navarrete, S.A., Broitman, B.R. & Menge, B.A. 2008 Interhemispheric comparison of recruitment to rocky intertidal communities: pattern persistence and scales of variation. Ecology 89, 1308-1322.
[2] Navarrete, S.A., Broitman, B., Wieters, E.A., Finke, G.R., Venegas, R.M. & Sotomayor, A. 2002 Recruitment of intertidal invertebrates in the southeast Pacific: inter-annual variability and the 1997-1998 El Niño. Limnology and Oceanography 47, 791-802. (doi:DOI: 10.4319/lo.2002.47.3.0791).
