Sex-dependent shifts in visual detection thresholds under turbid conditions in an African cichlid
Data files
Jun 06, 2025 version files 12.24 KB
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field_opto.csv
1.76 KB
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field-opto_analysis.R
1.31 KB
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README.md
2.68 KB
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rearing_opto.csv
2.65 KB
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rearing-opto_analysis.R
3.83 KB
Abstract
Turbidity is increasing in freshwaters globally due to human activities and is known to affect visually-mediated behaviors in fish. As anthropogenic impacts continue to degrade aquatic environments, it is critical to determine how sensory systems are affected and what this might mean for population persistence. We investigated the effect of turbidity on visual detection thresholds in an African cichlid fish (Pseudocrenilabrus multicolor) that experiences environmental extremes across its East African range. We tested the visual abilities of adult wild-caught fish from two sites representing the extremes of turbidity and oxygen (a high turbidity, high dissolved oxygen river and a low turbidity, low dissolved oxygen swamp). Further, we reared offspring of wild-caught parents from each population in a full-factorial high/low oxygen, high/low turbidity design to tease apart the influence of each stressor on visual detection thresholds. We used an optomotor response test to determine detection thresholds under increasing levels of turbidity for both wild-caught and lab-reared fish. Detection thresholds were higher in the wild-caught river population compared to the swamp population, and there was a strong sex difference, such that wild-caught males had higher detection thresholds than females, regardless of population of origin. Our results suggest that there are sex-based differences in contrast detection abilities that could play a critical role in visual ecology for populations experiencing divergent turbidity regimes. In the rearing experiment, sex-based differences in detection thresholds were influenced by different aspects of the rearing treatment. Detection threshold varied significantly by oxygen rearing treatment for males and by the interactive effects of oxygen and turbidity for females. This research improves our understanding of the effect of elevated turbidity on African cichlid vision and contributes to growing knowledge of how animals respond to environmental change.
Ethics statement:
All research was approved by The Ohio State University Institutional Animal Care and Use Committee (2014A00000055-R1). Permission was given by the Commissioner of Fisheries Resources Management and Development, Uganda, for export of fish, and from the Uganda National Council for Science and Technology for permission to conduct research.
This file contains metadata for two files used in two R scripts associated with this manuscript.
Description for WILD CAUGHT: field_opto.xlsx used in field-opto_analysis.R
All code is provided for the analyses as described in the manuscript.
Pseudocrenilabrus multicolor (haplochromine cichlid fish) were collected from two sites in western Uganda and used as the parental population for a rearing experiment. Each row in the dataset represents metrics for a single fish.
Variable Description
ID: individual number assigned to each fish
Population: coded for variable for each Population (NYA=River, LWA=Swamp)
Sex: sex of individual fish
SL: standard length of fish (cm)
T1 - direction: randomly determined direction of optomotor apparatus (clockwise (C) or counterclockwise (CC)) for trial 1
T1 - stop: detection threshold; ending turbidity for trial 1 in NTU
T2 - direction: randomly determined direction of optomotor apparatus (clockwise (C) or counterclockwise (CC)) for trial 2
T2 - stop: detection threshold; ending turbidity for trial 2 in NTU
ave: average of T1 - stop and T2 - stop
diff: the difference between T1 - stop and T2 - stop
Description for REARING: rearing_opto.xlsx used in rearing-opto_analysis.R
All code is provided for the analyses as described in the manuscript.
Pseudocrenilabrus multicolor (haplochromine cichlid fish) were collected from two sites in western Uganda and used as the parental population for a rearing experiment. Each row in the dataset represents metrics for a single fish.
Variable Description
ID: individual number assigned to each fish
Population: coded for variable for each Population (NYA=River, LWA=Swamp)
Rearing: coded for variable for rearing treatment (hypoxic-clear (HC); hypoxic-turbid (HT); normoxic-clear (HC); normoxic-turbid (HT)).
Oxygen: coded for variable for rearing treatment (hypoxic (H); normoxic (N))
Turbidity: coded for variable for rearing treatment (clear (C); turbid (T))
Tank: rearing tank number
Brood: brood identifier
Sex: sex of individual fish
SL: standard length of fish (cm)
T1 - direction: randomly determined direction of optomotor apparatus (clockwise (C) or counterclockwise (CC)) for trial 1
T1 - stop: detection threshold; ending turbidity for trial 1 in NTU
T2 - direction: randomly determined direction of optomotor apparatus (clockwise (C) or counterclockwise (CC)) for trial 2
T2 - stop: detection threshold; ending turbidity for trial 2 in NTU
ave: average of T1 - stop and T2 - stop
diff: the difference between T1 - stop and T2 - stop
