Data from: Collagen fiber density observed in metastatic ovarian cancer promotes tumor cell adhesion
Data files
Aug 06, 2026 version files 57.16 GB
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2024_10_9_Lifeact_OV3_3_hr-01.czi
20.32 GB
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Figure_1_and_SF_1.zip
451.86 MB
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Figure_2_and_SF2.zip
3.17 GB
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Figure_3_and_SF3.zip
1.15 GB
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Figure_4_and_SF4.zip
719.43 MB
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Figure_5.zip
782.37 MB
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Figure_6.zip
2.74 GB
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README.md
2.76 KB
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SF5A_and_B.zip
3.05 GB
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SF5C_and_D.zip
3.66 GB
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SF5E_and_F.zip
3.07 GB
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SF5G_and_H.zip
938.36 MB
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SF6A_and_B_with_overview_.zip
186.31 MB
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SF6C_-_HT29.zip
2.57 GB
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SF6C_-_OV90.zip
2.60 GB
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SF6C_-_OVCAR8.zip
3.06 GB
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SF6D_-_OV90.zip
2.59 GB
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SF6D_-_OVCAR3.zip
2.98 GB
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SF6D_-_OVCAR8.zip
3.10 GB
Abstract
Collagen type I, a key structural component of the extracellular matrix (ECM), is frequently altered in cancer, with altered fiber organization at the primary tumor site linked to metastasis and poor patient outcomes. Here, we demonstrate that collagen fibers are also altered in metastatic sites such as the omentum of patients with high-grade serous ovarian cancer (HGSOC). Specifically, we observed a significant increase in fiber density, alignment, and width. To determine if the increase in fiber density supports metastasis, we used a semi-interpenetrating methacrylated gelatin (gelMA) network in combination with increasing fibrillar collagen. Cancer cells had significantly increased adhesion as collagen fiber density increased. To determine the responsible mechanisms, we used orthogonal systems to examine 1) the different adhesion peptides exposed in collagen (GFOGER) and gelatin (RGD), and 2) the physical structure of fibers. Cells had minimal response to GFOGER, either alone or in combination with RGD, suggesting that increased adhesion did not result from this collagen-specific interaction. Cell adhesion was significantly higher on electrospun PCL-gelatin fibers compared to flat PCL-gelatin substrates, suggesting that increased cell adhesion resulted from fiber structure. We next investigated the cellular mechanisms involved in increased adhesion on gelMA/coll and found that actin polymerization, but not myosin II contractility, was needed. We further demonstrated that cells on fibrous gels had more robust actin polymerization, and that this resulted in greater adhesion strength. Combined, these results suggest that the increase in collagen fibers with tumor metastasis will support the development of additional metastases. Statement of significance: This work advances the evaluation of the matrisome of the omentum, the most common metastatic site in advanced ovarian cancer, by characterizing how collagen fibers change with disease progression. To examine the effect of collagen fibers on metastasis, we utilized a suite of in vitro biomaterials to identify a novel role for collagen fibers in supporting cell adhesion through increased actin dynamics during nascent adhesion formation, which results in increased adhesion strength at later times.
Each zipped folder contains the data related to an individual figure and any related supplemental figures in the manuscript. Each folder has a README explaining the naming conventions of files.
Data were collected by or with Ali Abbaspour in the lab of Pamela Kreeger at UW SMPH.
GG is a frequent abbreviation for GelMa/Gel and GC for GelMA/Coll
Figure_1_and_SF_1.zip contains the images and quantification for Figure 1 and SF1
Figure_2_and_SF2.zip contains the images and quantification for Figure 2 and SF2
Figure_3_and_SF3.zip contains the images and quantification for Figure 3 and SF3
Figure_4_and_SF4.zip contains the images and quantification for Figure 4 and SF4
Figure_6.zip contains the images and quantification for Figure 6
SF5A_and_B.zip contains the images and quantification SF5A and SF5B
SF5C_and_D.zip contains the images and quantification SF5C and SF5D
SF5E_and_F.zip contains the images and quantification SF5E and SF5F
SF5G_and_H.zip contains the images and quantification SF5G and SF5H
Figure_5.zip contains the images and quantification for Figure 5
2024_10_9_Lifeact_OV3_3_hr-01.czi is the original microscopy file used for Figure 5 actin analysis.
SF6A_and_B_with_overview_.zip contains the images and quantification SF6A and SF6B
SF6C_-_HT29.zip contains the images and quantification SF6C (HT-29 cells)
SF6C_-_OV90.zip contains the images and quantification SF6C (OV90 cells)
SF6C_-_OVCAR8.zip contains the images and quantification SF6C (OVCAR8 cells)
SF6D_-_OV90.zip contains the images and quantification SF6D (OV90 cells)
SF6D_-_OVCAR3.zip contains the images and quantification SF6D (OVCAR3 cells)
SF6D_-_OVCAR8.zip contains the images and quantification SF6D (OVCAR8 cells)
NOTE: File formats are primarily .xlsx, .tif, and .avi. Raw data for microscopy was collected on both Nikon (.nd2) and Zeiss (.czi) equipment. These files can be opened using the publicly available importers in FIJI (PMC3855844). The software can be downloaded at https://fiji.sc/
Human subjects data
De-identified formalin-fixed, paraffin-embedded omental samples from patients with stage III/IV HGSOC were obtained from archived pathology samples through a protocol approved by the IRB at the University of Wisconsin-Madison. Ascites samples were collected during primary debulking surgeries of patients diagnosed with Stage III/IV HGSOC. The University of Wisconsin Carbone Cancer Center Translational Science BioCore acted as an honest broker under IRB #2016–0934, obtaining informed consent from all participants and de-identifying samples before providing to the research team.
