Data from: Small molecule OPA1 inhibitors reverse mitochondrial adaptations to overcome therapy resistance in acute myeloid leukemia
Data files
Jun 05, 2026 version files 5.59 MB
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Metabolomics_OPA1_KO_Intensity.corrected.values_Dryad.xlsx
38.04 KB
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README.md
2.59 KB
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RNAseq_OPA1_KO_counts.normalized.xlsx
5.55 MB
Abstract
Dataset DOI: 10.5061/dryad.547d7wmmb
Description of the data and file structure
Metabolomics in MOLM-13 and Kasumi-1 cells expressing sgRNAs targeting OPA1 or ROSA (negative control)
Transcriptomics in MOLM-13 and Kasumi-1 cells expressing sgRNAs targeting OPA1 or ROSA (negative control) - normalized counts
Files and variables
File: Metabolomics_OPA1_KO_Intensity.corrected.values_Dryad.xlsx
Description: Metabolomics (LC-MS/MS). Quantification of metabolites in OPA1 knockout MOLM-13 and Kasumi-1 cells. MS analyses were carried out by coupling the LC system to a Thermo Q Exactive HFTM mass spectrometer operating in heated electrospray ionization mode (HESI).
Biological triplicates per group.
- sgROSA: wild type
- sgOPA1_1 and sgOPA1_4: OPA1 knockout, using two different single guide RNAs.
Variables
- Column A shows the Metabolite number, identified in our LC-MS/MS
- Column B shows the Metabolite name, identified in our LC-MS/MS
- Column C-T shows the different samples:
- MOLM13 sgROSA A (3 biological triplicates) - wild type
- MOLM13 sgOPA1_1 (3 biological triplicates) - OPA1 knockout
- MOLM13 sgOPA1_4 (3 biological triplicates) - OPA1 knockout
- Kasumi-1 sgROSA (3 biological triplicates) - wild type
- Kasumi-1 sgOPA1_1 (3 biological triplicates) - OPA1 knockout
- Kasumi-1 sgOPA1_4 (3 biological triplicates) - OPA1 knockout
- Each row (from 3 to 149) represents the different metabolites detected and their relative intensity in LC-MS/MS, indicative of their abundance.
File: RNAseq_OPA1_KO_counts.normalized.xlsx
Description: Transcriptomics (RNA sequencing). RNA sequencing was performed in OPA1 knockout MOLM-13 (in triplicate) and Kasumi-1 cells (in duplicates). Normalized read counts are presented.
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sgROSA: wild type
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sgOPA1_1 and sgOPA1_4: OPA1 knockout, using two different single guide RNAs.
Variables
Each row represents a different gene and its read counts in the different samples, indicative of their transcript expression
Each column represents a different replicate
- MOLM13 sgROSA A (3 biological triplicates) - wild type
- MOLM13 sgOPA1_1 (3 biological triplicates) - OPA1 knockout
- MOLM13 sgOPA1_4 (3 biological triplicates) - OPA1 knockout
- Kasumi-1 sgROSA (2 biological triplicates) - wild type
- Kasumi-1 sgOPA1_1 (2 biological triplicates) - OPA1 knockout
- Kasumi-1 sgOPA1_4 (2 biological triplicates) - OPA1 knockout
