Data from: Demography of an imperiled minnow species (Lepidomeda aliciae: Leuciscidae) under different predation regimes
Data files
May 15, 2026 version files 110.38 KB
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README.md
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southern_leatherside_chub_lengths_for_Diversity.xlsx
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Southern_Leatherside_Chub_Mark-Recapture_data.xlsx
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Abstract
To understand the demography of an evolutionarily naïve fish species that sometimes coexists with an invasive predator, we collected mark-recapture data and size-frequency data of two populations of southern leatherside chub (Lepidomeda aliciae), one of which coexists with nonnative brown trout (Salmo trutta). For each population, we estimated vital rates from mark-recapture data to inform a stage-structured matrix transition model. We also used size-frequency distributions from these populations in an integral projection model.
This dataset contains mark–recapture records for Southern Leatherside Chub (Lepidomeda aliciae) collected from Salina Creek and Lost Creek in the Sevier River Basin, Utah, USA. Fish were captured, batch-marked using Visible Implant Elastomere, and released. Subsequent recaptures were also marked and released. Data were used to estimate survival and population demography in two ecologically similar but demographically contrasting stream populations using a Cormack-Jolly-Seber Model and a Matrix Transition Model (see ASSOCIATED PUBLICATION).
The second dataset contains standard length records for Southern Leatherside Chub (Lepidomeda aliciae) collected from Salina Creek and Lost Creek in the Sevier River Basin, Utah, USA. Fish were captured, measured for Standard Length (mm), and released. Data were used to create length distributions and analyzed using an Integrated Projection Model to estimate species demography (see ASSOCIATED PUBLICATION).
Geographic coverage
- Salina Creek (Sevier County, Utah; 38.9 N 111.7 W, elev. 1807 m)
- Lost Creek (Sevier County, Utah; 38.8 N 111.9 W, elev. 1746 m)
Temporal coverage
- Salina Creek 2003 - 2006
- Lost Creek 2003 - 2005
Taxonomic coverage
Southern Leatherside Chub (Lepidomeda aliciae)
File list:
- Southern_Leatherside_Chub_Mark-Recapture_data.xlsx
- southern_leatherside_chub_lengths_for_Diversity.xlsx
File description:
Southern_Leatherside_Chub_Mark-Recapture_data.xlsx contains four columns containing capture histories for marked Southern Leatherside Chub captured during repeated sampling events in Salina Creek and Lost Creek.
southern_leatherside_chub_lengths_for_Diversity.xlsx contains four columns containing information related to individual lengths of Southern Leatherside Chub captured during repeated sampling events in Salina Creek and Lost Creek.
Variable descriptions
File: Southern_Leatherside_Chub_Mark-Recapture_data.xlsx
Species
Values: Southern Leatherside Chub
Site
Stream of capture.
Values: Salina Creek, Lost Creek.
Capture History
Formatted capture history for input into Mark-Recapture analysis, such as Program Mark - Multi-strata Recaptures Only
Values: 0 - not captured during that sampling event
S - captured with a Standard Length between 40 - 64 mm
M - captured with a Standard Length between 65 - 84 mm
L - captured with a Standard Length greater than 84 mm
Count
The number of individuals in the dataset from that stream with that particular capture history sequence.
File: southern_leatherside_chub_lengths_for_Diversity.xlsx
Species Values: Southern Leatherside Chub
Site, Stream of capture. Values: Salina Creek, Lost Creek.
Year, The year the sampling event occurred.
Values: 2003 - 2006
Standard Length (mm)
The standard length in millimeters of individual Southern Leatherside Chub captured
Values: 36 - 144
Data collection methods:
Fish were captured using standardized backpack electrofishing surveys conducted at fixed sites within each stream. Upon initial capture, individuals were measured for standard length, marked with a batch identifier based on length and year, and released at the point of capture. Subsequent sampling events recorded recaptures of previously marked individuals. Sampling protocols were consistent across streams and years (see ASSOCIATED PUBLICATION).
Study system
Southern leatherside chub are a rare fish species of the family Leucisidae found in small streams of the eastern Great Basin in central Utah in the western United States. They live up to 8 years and reach standard lengths (SL) of 140 mm. They have one breeding season annually, from mid to late summer.
Salina Creek (upstream from the town of Salina, Sevier County, Utah; 38.9 N 111.7 W, elev. 1807 m) and Lost Creek (just southwest of Salina, Sevier County, Utah; 38.8 N 111.9 W, elev. 1746 m) are two adjacent stream systems where populations of southern leatherside chub occur. Both river systems have similar habitat quality, such as range of depths (Salina Creek depth range was 0.25–1.5 m and Lost Creek depth range was 0.30–2.0 m during the study period) and the presence of backwaters and side channels. Habitats in these streams consist of heterogeneous instream structure, such as deep pools (> 1 m), riffles, including cover from riparian vegetation, and undercut banks. Brown trout —a nonnative, piscivorous salmonid— were introduced into Utah in the early 1900s and stocked in streams across Utah where native cutthroat trout (Oncorhynchus clarkii utah) were once present. Southern leatherside chub co-exist with nonnative brown trout in Lost Creek, which prey upon southern leatherside chub. Large aquatic predators capable of consuming adult southern leatherside chub are absent in Salina Creek. Other species present at both sites include speckled dace (Rhinichthys osculus), mottled sculpin (Cottus bairdii), and mountain sucker (Catostomus platyrhynchus), none of which prey upon adult southern leatherside chub. Here we refer to the population in Lost Creek with brown trout present as a predator environment and the population in Salina Creek, absent of brown trout as a predator-free environment, though it is likely that early life stages of our native species of interest experience predation from other native species, including adult southern leatherside chub.
Mark-recapture design
To obtain vital rates for southern leatherside chubs, we conducted a multi-year mark-recapture study in Lost Creek and Salina Creek from 2003 to 2006. In each stream, we established four contiguous 50-m segments and blocked each at the downstream end with nets. Fish were removed from each segment using three successive electrofishing passes with a Smith-Root LR-24 backpack electrofisher (Vancouver, Washington). Segments were sampled sequentially in an upstream direction. Captured fish were sorted into aerated tubs by species; non-target species were released immediately, while southern leatherside chub were retained for measurement and marking.
Southern leatherside chub were measured (standard length, SL) and assigned to one of three size classes based on size-at-maturity and known growth patterns. Individuals measuring 40–64 mm SL were marked with Visual Implant Elastomer (VIE; Northwest Marine Technology, Inc., Anacortes, Washington) at the dorsal insertion of the caudal fin. Fish between 65–84 mm SL were marked at the ventral insertion of the caudal fin, and those greater than 84 mm SL were marked at the base of the anal fin. Each year of capture was denoted by a unique elastomer color. Individuals less than 40 mm SL, presumed to be young-of-the-year, were excluded from the study due to the potential for increased marking-related mortality and limited detectability during electrofishing. Visual Implant Elastomer marks have been shown to remain visible in southern leatherside chub for multiple years. Because there is no evidence of sexual dimorphism in the species, individuals were not sexed.
In 2004, we expanded our sampling efforts beyond the original four 50-m segments. In this year, we sampled an additional 50-m segments downstream beginning at distances of 50, 100, 250, and 500 meters from the lower boundary of the original sampling area. Upstream, sampling included segments located at 0, 100, and 200 meters from the uppermost boundary of the original reach. We marked all southern leatherside chub recaptured from previous years captured in these extended segments using the same VIE protocol to indicate size class and year of capture. New captures in the extended segments were not marked.
In 2005, upstream and downstream sampling was standardized to 150 meters in each direction from the original four segments, sampled in 50-m increments. Unmarked individuals captured within the original segments were marked according to the same protocol used in previous years. In 2006, our sampling was restricted to Salina Creek, and no new marks were administered that year.
