Data from: Regulatory responses of ectothermic embryos to predicted heat stresses under near-future climate change
Data files
Jul 23, 2026 version files 6.65 MB
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Hot_embryo_counts.csv
6.65 MB
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Hot_embryo_meta.csv
1.94 KB
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README.md
4.54 KB
Abstract
Heat stress can disrupt coordinated regulatory processes underpinning normal development, resulting in embryonic malformation and inviability. Embryonic buffering against thermal challenge may therefore play a crucial role in individual survival and population resilience under heat stress. Yet, the molecular mechanisms underpinning embryonic defense against ecologically meaningful heat stresses remain poorly understood. We investigated the regulatory responses of brown anole (Anolis sagrei) embryos to three patterns of heat stress we find will increase under near-future climate warming. Across chronic, persistent, and acute heat treatments, embryos exhibited rapid transcriptome-wide disruption followed by recovery toward normal developmental trajectories within 24 h. Despite this broad perturbation, a core regulatory module governing forebrain and craniofacial development remained strongly preserved across heat insults. Heat stress induced widespread transcriptional suppression alongside increased reliance on post-transcriptional regulation and a dose-dependent slowing of RNA flux, consistent with mitigation of proteotoxic stress. Concurrently, embryos rewired regulatory networks through recruitment of extramodular stress-response genes and strengthening co-expression within developmental pathways. Together, these results reveal a hierarchical regulatory strategy in which embryos buffer essential developmental programs while flexibly reconfiguring peripheral networks to manage cellular stress. This systems-level resilience underscores the importance of early-life adaptive regulatory plasticity in shaping organismal responses to climate warming.
Dataset DOI: 10.5061/dryad.59zw3r2mr
Description of the data and file structure
We investigated transcriptomic responses of the precursors to the forebrain and anterior skull (telencephalon, craniofacial structure, eye, and neural crest cells) to thermal challenges paralleling those experienced in natural nest sites within the species’ native range. To evaluate potential mechanisms protecting these processes from environmental heat stress, we exposed embryos collected at the time of oviposition to thermal treatments simulating persistent, chronic, and acute thermal insults that embryos may experience now or over the next 75-100 years.
Files and variables
File: Hot_embryo_meta.csv
Description: Metadata associated with samples used for transcriptomic analyses.
Variables
- Specimen number: Unique identifier for each sample.
- Day collected: Indicates whether the sample was collected on the day of (0) or the day after (1) oviposition.
- Treatment: Incubation temperature (degrees Celsius).
- Time: Incubation duration (hours).
File: Hot_embryo_counts.csv
Description: Read counts for samples used in transcriptomic analyses. Each column contains the raw sequencing reads mapped to each gene for that sample and they are individual RNA-seq samples.
Variables
- GeneID: Ensembl IDs for transcripts mapped to the Anolis carolinensis reference genome.
- sample_2337: Raw read counts
- sample_2340: Raw read counts
- sample_2343: Raw read counts
- sample_2345: Raw read counts
- sample_2367: Raw read counts
- sample_2371: Raw read counts
- sample_2372: Raw read counts
- sample_2405: Raw read counts
- sample_2422: Raw read counts
- sample_2423: Raw read counts
- sample_2424: Raw read counts
- sample_2427: Raw read counts
- sample_2429: Raw read counts
- sample_2430: Raw read counts
- sample_2431: Raw read counts
- sample_2436: Raw read counts
- sample_2437: Raw read counts
- sample_2438: Raw read counts
- sample_2439: Raw read counts
- sample_2440: Raw read counts
- sample_2441: Raw read counts
- sample_2442: Raw read counts
- sample_2443: Raw read counts
- sample_2445: Raw read counts
- sample_2446: Raw read counts
- sample_2447: Raw read counts
- sample_2448: Raw read counts
- sample_2449: Raw read counts
- sample_2458: Raw read counts
- sample_2459: Raw read counts
- sample_2460: Raw read counts
- sample_2464: Raw read counts
- sample_2465: Raw read counts
- sample_2466: Raw read counts
- sample_2467: Raw read counts
- sample_2468: Raw read counts
- sample_2495: Raw read counts
- sample_2496: Raw read counts
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- sample_2504: Raw read counts
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- sample_2507: Raw read counts
- sample_2509: Raw read counts
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- sample_2516: Raw read counts
- sample_2517: Raw read counts
- sample_2518: Raw read counts
- sample_2520: Raw read counts
- sample_2529: Raw read counts
- sample_2530: Raw read counts
- sample_2531: Raw read counts
- sample_2532: Raw read counts
- sample_2534: Raw read counts
- sample_2535: Raw read counts
- sample_2536: Raw read counts
- sample_2537: Raw read counts
- sample_2538: Raw read counts
- sample_2539: Raw read counts
- sample_2542: Raw read counts
- sample_2543: Raw read counts
- sample_2548: Raw read counts
- sample_2549: Raw read counts
- sample_2550: Raw read counts
- sample_2551: Raw read counts
- sample_2552: Raw read counts
- sample_2553: Raw read counts
- sample_2558: Raw read counts
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- sample_2561: Raw read counts
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- sample_2563: Raw read counts
- sample_2564: Raw read counts
- sample_2565: Raw read counts
- sample_2566: Raw read counts
- sample_2567: Raw read counts
- sample_2568: Raw read counts
- sample_2569: Raw read counts
- sample_2570: Raw read counts
- sample_2572: Raw read counts
- sample_2573: Raw read counts
- sample_2574: Raw read counts
- sample_2575: Raw read counts
- sample_2579: Raw read counts
- sample_2580: Raw read counts
- sample_2586: Raw read counts
- sample_2587: Raw read counts
- sample_2588: Raw read counts
