The same species, not the same invader: Metabolic responses of genetically distinct invasive populations of Dikerogammarus villosus and their intraspecific hybrid to environmental stresses
Data files
Jun 10, 2025 version files 146.99 KB
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README.md
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The_same_species__not_the_same_invader.zip
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Abstract
Climate change has a profound impact on ectotherms, which suffer suboptimum thermal conditions in their native areas or spread to previously unavailable locations. However, it is often neglected that responses to environmental changes are likely at a population level, rather than species-specific phenomenon.
Two groups (Western and Eastern) of the invasive Ponto-Caspian amphipod Dikerogammarus villosus independently spread in Europe from two geographically isolated and genetically distinct source populations living in the Danube and Dnieper deltas, respectively. They are expected to meet in the near future in Polish inland waters. This makes this species a perfect model to investigate the intraspecific variability in responses to environmental changes, as well as effects of hybridization between different genetic units on invasiveness.
We scaled maximal metabolic rate (MMR), standard metabolic rate (SMR), and aerobic scope (AS, a measure of physiological performance) of D. villosus at different temperatures (15 and 25 oC) and oxygen levels (9.5 or 7.5 mg/l at a temperature of 15 and 25 oC, respectively and 5.5 mg/l at both temperatures) to test for differences in responses to environmental changes among the distinct invasive groups and their hybrid.
Large Western Group individuals showed a lower AS at a high temperature, compared to low temperature and to the Eastern group individuals, whereas small animals exhibited similar AS irrespective of temperature and group identity. Moreover, large individuals from both groups experienced a reduction in MMR and AS under low oxygen conditions, whereas small animals did not change these parameters in response to oxygen reduction. Although parental groups reduced their AS in response to oxygen reduction, AS of the hybrid remained unchanged.
In conclusion, organism responses to climate change depend on intraspecific variation, which should be considered in studies related to this topic. Furthermore, D. villosus appears sensitive to oxygen deficits and temperature changes (especially the Western group and large individuals), but intraspecific hybridisation can enhance the environmental tolerance of invaders.
Dataset DOI: 10.5061/dryad.5tb2rbpft
Description of the data and file structure
The authors collected matabolic response data (saved in wild.xlsx and hybdrids.xlsx files) during the experiment using intermittent flow-through respirometry setup. The data on river water temperatures (temperature data.xlsx) were obtained from the public repository of the Institute of Meteorology and Water Management (Instytut Meteorologii i Gospodarki Wodnej) in Poland (https://danepubliczne.imgw.pl/data/dane_pomiarowo_obserwacyjne/, accessed: 11.2024). The compressed .zip file contains .xlsx files with data necessary to recreate all statistical analyses related to the study. It also includes the code prepared in R open software.
Files and variables
File: The_same_species__not_the_same_invader.zip
Description:
wild.xlsx - the file contains raw data collected during the experiment on wild amphipods populations. Variables:
id – numeric; amphipod identifier
amph.group – categorical; amphipod group to which particular amphipod belong; Western group refers to animals collected from Oder River, Eastern group – Vistula River
coll.site – categorical; amphipod collection site, unique for each river
temp – categorical; experimental temperature used, 15 or 25 oC
oxygen – categorical; oxygen conditions during the experiment, saturated or reduced (see main text for details)
mass – numerical; amphipod body mass, expressed as log10-transformed body mass in grams
mmr – numerical; maximum metabolic rate score, expressed as log10-transformed raw value measured in mg O2 h-1
smr – numerical; standard metabolic rate score, expressed as log10-transformed raw value measured in mg O2 h-1
as – numerical; aerobic scope score, expressed as log10-transformed difference between raw values of maximum and standard metabolic rate measured in mg O2 h-1
hybrids.xlsx - the file contains raw data collected during the experiment on F1 hybrids bred from wild populations.
Variables:
id – numeric; amphipod identifier
amph.group – categorical; amphipod group to which particular amphipod belong; Western group refers to animals collected from Oder River, Eastern group – Vistula River
oxygen – categorical; oxygen conditions during the experiment, saturated or reduced (see main text for details)
mass – numerical; amphipod body mass, expressed as log10-transformed body mass in grams
mmr – numerical; maximum metabolic rate score, expressed as log10-transformed raw value measured in mg O2 h-1
smr – numerical; standard metabolic rate score, expressed as log10-transformed raw value measured in mg O2 h-1
as – numerical; aerobic scope score, expressed as log10-transformed difference between raw values of maximum and standard metabolic rate measured in mg O2 h-1
temperature data.xlsx – data on water temperature recorded since 1984 on both rivers (Oder and Vistula) where the amphipods for the experiment were collected. The file contains two sheets:
Sheet 1: annual mean – data with annual mean water temperatures for both rivers
Sheet 2: annual max – data with annual maximum water temperatures for both rivers
Variables:
site – categorical; the name of the measurement station according to the Institute of Meteorology and Water Management in Poland
river – categorical; the name of the river on which measurement station is located
year – numeric; year of the measurement
temp – numeric; water temperature measured expressed in oC
Code/software
The compressed .zip folder contains „The same species, not the same invader.Rproj” file, which is a project creater in R open software to analyze experimental data. Specific parts of Rcode are provided in .R files:
Exp1 – wild.R – this file contains code neccesary to recreate all analyses using for the results of the first experiment - impact of varying oxygen and temperature conditions on the metabolic scaling of the wild invasive amphipod groups
Exp2 – hybrids.R - this file contains code neccesary to recreate all analyses using for the results of the second experiment - impact of oxygen limitation on metabolic scaling of the F1 generation of amphipods bred in the mesocosm culture: two pure groups and their intraspecific hybrid
River temp.R – this file contains code used to analyse long-term water temperature changes in the Vistula and Oder Rivers – amphipods collection sites
All code provided was created and used with R open software, ver 4.2.1. The list of packages needed is provided at the beginning of the each code.