Data from: The adaptive function of waste management in a social spider mite
Data files
Oct 27, 2025 version files 1.48 MB
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R_markdown_file.html
1.45 MB
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R_markdown_file.Rmd
18.01 KB
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README.md
7.27 KB
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STable1.csv
3.99 KB
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STable2.csv
1.48 KB
Abstract
Effective waste management is fundamental to the success of social living, playing a key role in disease prevention and maintaining a habitable environment. However, experimental evidence for its adaptive significance remains limited, primarily due to the difficulties in manipulating defecation behaviour. The social spider mite Stigmaeopsis longus defecates cooperatively near nest entrances, guided by tactile and chemical cues. We experimentally altered the number and location of defecation sites using host plant extracts that mimic the chemical cues and examined the effects on reproduction and survival under different female densities. Centralised and increased defecation sites reduced egg survival in high-density nests, but not in low-density ones. Nevertheless, both densities exhibited increased nest extension, suggesting a compensatory response. When nest extension was physically prevented, egg survival declined even in low-density nests, confirming that nest extension mitigates the faecal hazards. These findings demonstrate that spatial control of waste is crucial for supporting group living by reducing exposure to faecal hazards, particularly for immobile life stages such as eggs. This study provides the first empirical evidence for the adaptive function of waste management in spider mites, highlighting its potential role in the evolution of sociality and nest-based living in arthropods.
Dataset DOI: 10.5061/dryad.5tb2rbpgv
Description of the data and file structure
This dataset was collected to investigate the adaptive function of defecation behaviour in the social spider mite Stigmaeopsis longus. Two experiments were conducted:
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Table S1 contains data from Experiment 1, in which defecation was manipulated while allowing nest extension.
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Table S2 contains data from Experiment 2, in which nest extension was blocked during defecation manipulation.
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R_markdown_file.Rmd provides the R script used for figure preparation and statistical analysis.
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R_markdown_file.html shows the output of the R script, using the datasets (Table S1 and Table S2) to generate the figures and conduct the analysis.
Files and variables
File: STable1.csv
Description: Data set in experiment 1: Defecation manipulation with nest extension allowed.
| Column name | Description |
|---|---|
| Nest | Nest ID. |
| Temporal block | Temporal block ID. |
| Number of founder females | The number of mated, adult females used as nest founders (five or seven). |
| Treatment | “T” indicates treatment (use of a piece of filter paper soaked in host plant extract), and “C” indicates control (use of a piece of filter paper soaked in solvent, diethyl ether). |
| Number of pieces of filter paper | The number of filter papers used in the 14-day experiment. “NA” indicates missing values. |
| Number of defecation sites | The number of defecation sites observed during the 14-day experiment. “NA” indicates missing values. |
| Number of adult females_Live | The number of mated, adult females surviving at the end of the 14-day experiment. “NA” indicates missing values. |
| Number of adult females_Dead | The number of mated, adult females dead at the end of the 14-day experiment. “NA” indicates missing values. |
| Number of immatures_Live | The number of immatures surviving at the end of the 14-day experiment. “NA” indicates missing values. |
| Number of immatures_Dead | The number of immatures dead at the end of the 14-day experiment. “NA” indicates missing values. |
| Number of eggs_Live | The number of eggs surviving at the end of the 14-day experiment. “NA” indicates missing values. |
| Number of eggs_Dead | The number of eggs dead at the end of the 14-day experiment. “NA” indicates missing values. |
| Frequency of nest extensions | The number of nest extensions observed during the 14-day experiment. |
File: STable2.csv
Description: Table S2 Data set in experiment 2: Defecation manipulation with nest extension blocked.
| Column name | Description |
|---|---|
| Nest | Nest ID. |
| Temporal block | Temporal block ID. |
| Treatment | “T” indicates treatment (use of a piece of filter paper soaked in host plant extract), and “C” indicates control (use of a piece of filter paper soaked in solvent, diethyl ether). |
| Number of adult females_Live | The number of mated, adult females surviving at the end of the 14-day experiment. “NA” indicates missing values. |
| Number of adult females_Dead | The number of mated, adult females dead at the end of the 14-day experiment. “NA” indicates missing values. |
| Number of immatures_Live | The number of immatures surviving at the end of the 14-day experiment. “NA” indicates missing values. |
| Number of immatures_Dead | The number of immatures dead at the end of the 14-day experiment. “NA” indicates missing values. |
| Number of eggs_Live | The number of eggs surviving at the end of the 14-day experiment. “NA” indicates missing values. |
| Number of eggs_Dead | The number of eggs dead at the end of the 14-day experiment. “NA” indicates missing values. |
R_markdown_file.Rmd
Description: R Markdown file containing the script for figure preparation and statistical analysis.
R_markdown_file.html
Description: HTML output generated by running the R Markdown file using the provided datasets.
