Untangling the influence of ambient temperature & photoperiod surrounding hibernation activity in American black bears (Ursus americanus)
Data files
Apr 22, 2026 version files 12.24 MB
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mcode.csv
12.23 MB
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PRSB_Code.R
7.05 KB
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README.md
2.93 KB
Abstract
Hibernation behavioral ecology remains understudied due to challenges in researching this cryptic physiological state. However, understanding relationships between physiological and environmental cues during hibernation is important for predicting behaviors in a changing climate. We examined behaviors of temporarily captive American black bears (Ursus americanus) exposed to natural environmental fluctuations surrounding hibernation. We analyzed 22,000+ hours of continuous video recordings of four female black bears, categorizing 45 behaviors. We used generalized linear mixed models and AIC model selection to analyze behaviors in relation to environmental (e.g., temperature, photoperiod) and physiological (e.g., body mass changes, hibernation stages) factors. We found a strongly supported interaction between photoperiod and temperature in 3 of 5 physiological stages in driving active behaviors, revealing potential drivers for hibernation onset and arousal. Photoperiod and temperature influenced activity levels, particularly during hyperphagia and den emergence, while temperature alone influenced activity during hibernation onset. Thus, predicted increases in temperatures due to climate change could lead to increased activity, especially surrounding hibernation onset. To our knowledge, no studies have investigated the interplay between photoperiod and temperature in bear hibernation ecology. We also highlight the potential for a mismatch between physiology and environmental cues in areas projected to experience increased temperatures under a changing climate.
Dataset DOI: 10.5061/dryad.7pvmcvf6z
The Royal Society Proceedings B
Publication DOI: 10.1098/rspb.2026.0374
Description of the data and file structure
This dataset was collected as part of the Black Bear Research Center (BBRC) at Virginia Tech, studying captive American black bears to examine physiological and behavioral aspects of hibernation. Behavioral data was obtained from camera monitoring systems positioned within enclosures to record bear activity throughout the time the bears were present at the BBRC. These video observations were used to characterize and quantify behavioral patterns associated with different hibernation states.
Files and variables
File: mcode.csv
Variables [Units]
- date: date at the Black Bear Research Center (BBRC)
- behav: observed behavior via camera
- behavppa: behavior category (active, passive alert, passive)
- tstart: start time of the observed behavior
- tend: end time of the observed behavior
- ttotal: total duration of the observed behavior [seconds]
- dur: numerical conversion of the observed behavior [seconds, numerical]
- precip: rainfall that day [millimeters]
- temp: mean temperature that day [Celcius]
- hibstage: hibernation stage of the individual bear on that date
- wt: female bear's relative growth rate (RGR) on that date [kg/day]
- light: photoperiod on that date [hours of the day]
- bbrcday: day the female bear had been at the BBRC (1 starting in September)
- bearid: individual female bear identifying number
- daynight: categorical variable of day or night based on the time of day
- s_precip: scaled rainfall for 'precip' variable above
- s_temp: scaled temperature for 'temp' variable above
- s_light: scaled photoperiod for 'light' variable above
- s_wt: scaled RGR for 'wt' variable above
Code and software
File: PRSB_Code.R
Software: R
All analyses were conducted in R. All scripts were run without modification using the environment detailed below. The full computational environment, including package versions, is provided to ensure reproducibility.
R session information (recorded April 2026):
package: tidyverse, dplyr, MASS, AICcmodavg
R version 4.4.0 (2024-04-24 ucrt)
Platform: x86_64-w64-mingw32/x64
Running under: Windows 11 x64 (build 26200)
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] AICcmodavg_2.3-3 MASS_7.3-60.2 lubridate_1.9.3
[4] forcats_1.0.0 stringr_1.5.1 dplyr_1.2.0
[7] purrr_1.0.2 readr_2.1.5 tidyr_1.3.1
[10] tibble_3.2.1 ggplot2_4.0.2 tidyverse_2.0.0
Access information
Other publicly accessible locations of the data:
- n/a
Data was derived from the following sources:
- n/a
