Tree genus composition of eleven lowland and lower montane tropical rain forests along a pedogenic gradient in northern Borneo
Data files
Nov 04, 2025 version files 18.10 KB
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Data_matrix_of_the_eleven_plots.csv
12.36 KB
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README.md
2.46 KB
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Site_description.csv
3.29 KB
Abstract
The data file contains the community composition at genus level for eleven lowland tropical rain forest (LTRF) and lower montane tropical rain forest (MTRF) in northern Borneo (the Malaysian state of Sabah), compiled from various sources, some of which were not indexed. Plot data include forests at Bukit Babi, Mt. Kinabalu (MTRF); Bukit Ular, Mt. Kinabalu (MTRF); Danum, Danum Valley (LTRF); Deramakot, Deramakot Forest Reserve (LTRF); Nabawan LC, Nabawan Town (LHF); Nabawan SC, Nabawan Town (LHF); Nalumad, Mt. Kinabalu (LTRF); PHQ, Mt. Kinabalu (MTRF); Poring, Mt. Kinabalu (LTRF); Tawau, Tawau Hill’s Park (LTRF); and Tawau Heath, Tawau Hill’s Park (LHF).
Dataset DOI: 10.5061/dryad.9cnp5hqzg
Description of the data and file structure
There are two csv files in this paper: 1) Data matrix of the eleven plots, and 2) Site description. The file “Data matrix of the eleven plots” contains a data matrix consisting of eleven plots (plot name) and 263 tree genera. The file “Site description” contains the information on plot locality, forest structure, soil chemical properties and data sources.
- Data_matrix_of_the_eleven_plots.csv: data matrix indicating genus relative abundances
- Site_description.csv: site descriptions of the eleven plots
Structure of the file “Data matrix of the eleven plots” is as follows:
263 tree genera are sorted alphabetically. Unidentified tree genera are excluded from the dataset. Vales in cells indicate relative abundances (%) of genera at each plot. Study plots include Bukit Babi, Mt. Kinabalu; Bukit Ular, Mt. Kinabalu; Danum, Danum Valley; Deramakot, Deramakot Forest Reserve; Nabawan LC, Nabawan Town; Nabawan SC, Nabawan Town; Nalumad, Mt. Kinabalu; PHQ, Mt. Kinabalu; Poring, Mt. Kinabalu; Tawau, Tawau Hill’s Park; and Tawau Heath, Tawau Hill’s Park. All sites are located in the Malaysian state of Sabah in northern Borneo. Exact coordinates are not available.
Variable names in the file “Site description” are as follows:
Plot name: name of the plots as appeared in “Data matrix of the eleven plots.”
Forest type: type of the forest at each plot.
Locality: Locality of each plot.
Canopy H (m): the height (m) of a tallest tree at each plot.
Soil N/P: the quotient of soil nitrate concentration to soil inorganic P concentration. Nitrate was extracted with 1.5N KCl solution and determined colorimetrically, and inorganic P was extracted with 1N NaHCO3 solution and determined colorimetrically. All soils are topsoil of 10 or 15-cm depth.
DC-ext Fe (mg/g): concentration of pedogenic Fe (mg/g) extractable in dithionite-citrate solution. For the exact determination method, see Wagai et al. (2008) Climate and parent material controls on organic matter storage in surface soils: A three-pool, density-separation approach. Geoderma 147: 23?33. doi:10.1016/j.geoderma.2008.07.010
Altitude (m): altitude (m) of each plot.
Data source: source of the data
Plot size of the eleven forests varied depending on forest stature, from 4 ha in tall lowland mixed dipterocarp forest to 0.25 ha in short-stature montane forest. All trees greater than 10 cm in diameter at breast height (dbh) were measured and identified to species. Relative abundances of species were derived from relative basal area in each plot. Relative abundances of genera were derived by lumping congeneric species by genus. Unidentified genera were excluded from the dataset. Tree genera include all gymnosperms, angiosperms and a few tree ferns.
Please see the related articles for a further description of the study sites and inventory methods.
Aiba S. & Kitayama K. (1999) Species composition, structure and species diversity of rain forests in a matrix of altitudes and substrates on Mt. Kinabalu, Borneo. Plant Ecology 140: 139-157. https://doi.org/10.1023/A:1009710618040
Imai N., Seino T., Aiba S-i., Takyu M., Titin J., Kitayama K. (2012) Effects of selective logging on tree species diversity and composition of Bornean tropical rain forests at different spatial scales. Plant Ecology 213: 1413-1424. https://doi.org/10.1007/s11258-012-0100-y
