PAM Southern California: goose-beaked whale shifting responses to long-standing naval sonar exposure
Data files
Jun 29, 2026 version files 1.18 GB
-
Data_broader-range_site_2009-2019.csv
463.29 MB
-
Data_core-range_site_2009-2019.csv
464.99 MB
-
Data_off-range_site_2009-2014.csv
247.95 MB
-
README.md
2.80 KB
Abstract
Predicting and mitigating the impacts of chronic noise on marine mammals is limited by sparse data on repeated disturbance. Naval sonar disrupts species behavior with lethal and sublethal risks, yet mitigation relies on short-term studies. We analyzed a decade of passive acoustic observational data to assess behavioral changes of goose-beaked whales (Ziphius cavirostris) at locations near and far from long-standing sonar operations. Whales remained present in impacted areas but exhibited patterns consistent with avoidance observed in exposure experiments. Interpreting these as responses, a 50% disturbance probability occurred at 122–132 dBpp re 1 µPa, below regulatory thresholds. With median 1.0–1.2 day intervals between exercises and 132–134 dBpp re 1 µPa daily received levels, disturbances imposed near-daily energetic and foraging costs. Differences in responses between areas with similar exposure suggest that ecological factors such as habitat quality may promote habitat persistence despite moderate disturbance. Over a decade, whales became more likely to be detected during shorter exercises and after exposure while maintaining sensitivity to moderate-to-high exposure levels. This suggests either reduced displacement responses over time or suitable prey conditions not found elsewhere as a result of changes in habitat conditions. These results suggest mitigation should prioritize sonar-free periods and limit exercise duration.
Dataset DOI: 10.5061/dryad.9p8cz8wwv
The data package consists of the following three files, each named according to the site the acoustic dataset were derived. The three monitoring sites were positioned at varying distances from the Southern California Anti-Submarine Warfare Range (SOAR): a core-range site on its western perimeter, a broader-range site farther south within the Southern California Offshore Range (SCORE), and an off-range site outside both SCORE and SOAR.
1. Data_core-range_site_2009-2019.csv
2. Data_broader-range_site_2009-2019.csv
3. Data_off-range_site_2009-2014.csv
The off-range site, used as a control for cross-site comparisons, was only monitored during the initial years of the study (2009-2014).
Data files contain 1-minute segments data from deployments of High-frequency Acoustic Recording Packages (HARPs), with detection of goose-beaked whale echolocation frequency-modulated pulses with received levels of at least 125 dBpp re 1 μPa, and mid-frequency active sonar (MFAS) pings with received levels of at least 100 dBpp re 1 μPa.
Data files include multiple variable information for each 1-minute segments:
- Time: start time of 1-minute segment (UTC).
- s: MFAS recording effort (1/0, presence/absence of recording).
- sPres: binary (1/0), presence/absence of MFAS pings.
- zc: goose-beaked whale recoding effort (1/0, presence/absence of recording).
- zcPres: binary (1/0), presence/absence of goose-beaked whale echolocation frequency-modulated pulses.
- sLag: Sonar lag: the number of 1-minute segments since last MFAS ping.
- consPres: Consecutive time with sonar presence: the number of 1-minute segments with consecutive MFAS presence.
- timeofd: Normalized time of day: normalized proportion of time from sunrise and sunset, as 0 the minute at sunset, and -1|1 at sunrise; negative values representing minutes from sunrise to sunset, and positive values from sunset to the following sunrise, scaled by period length.
- jd: Julian day.
- year: Year.
- sProp: Proportion of sonar: sum of duration of all pings (secs) that fall within 1-minute segments / 60 secs.
- cumSEL: Cumulative sound exposure level (SEL): cumulative SEL for 1-minute segments, adding Adding up values (SEL) from different pings in the same 1-minute segment:
bels = SEL/10
intensity = 10bels
cumSEL = 10*log10(sum(intensity))
- maxRLpp: Maximum peak-to-peak received sound pressure levels (RL): 0 if no pings, if multiple pings fall in 1-minute segment, result in the maximum RL.
- clusterID: block number defined as the cluster unit in all models.
- clusterObs: observation number within cluster unit.
