Plasticity in Daphnia eye size is determined by intra-generational environmental conditions
Data files
Jun 06, 2025 version files 68.59 KB
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Eyesize.csv
33.26 KB
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README.md
3.05 KB
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Rscript.R
32.28 KB
Abstract
Variation in structure and size of the eye in relation to light environments is well-documented across animal taxa. However, the long-term effects of ultraviolet radiation (UVR) on eye size across generations remain understudied, despite natural fluctuations in UVR being common in aquatic habitats. Here, we used Daphnia magna to test whether an evolutionary history of UVR threat modifies plasticity and transgenerational responses in eye size. We conducted a reciprocal split-brood experiment across three parthenogenetic generations using two groups maintained under either UVR or non-UVR conditions for over 150 generations, enabling the potential accumulation of adaptive responses and the establishment of distinct evolutionary lineages for comparison. We found strong plasticity in eye size, primarily shaped by current environmental conditions rather than transgenerational effects. Smaller eyes developed in response to UVR but rapidly reverted to larger dimensions in its absence. Furthermore, changes in relative eye size were associated with fitness-related traits, including swimming behaviour and reproductive output, although these relationships varied in strength and direction between UVR-exposed and unexposed individuals. Our study highlights the role of environmental stressors and evolutionary history in shaping sensory adaptations, providing conceptual advances on how sensory traits among aquatic invertebrates may rapidly evolve under changing environmental conditions.
Dataset DOI: 10.5061/dryad.b5mkkwhr2
Description of the data and file structure
This dataset includes all necessary data and code to replicate the analyses and visualizations presented in the manuscript titled "Plasticity in Daphnia eye size is determined by intra-generational environmental conditions". The file labelled "Eyesize.csv" contains eye size measurements of D. magna reared under non-UVR and UVR conditions across three parthenogenetic generations, as well as additional data on swimming speed, mean depth, age at maturation and the number of offspring produced in the first four clutches. The data file comprises 21 columns and the description of each column is provided below.
Files and variables
File: Eyesize.csv
Description: Data used in the analysis.
Variables
- Generation: Indicates the generation of experiment, G1=the first experimental generation, G2=the second experimental generation, G3=the third experimental generation.
- Past.environmental.history: The evolutionary history of stressors in the ancestral generations, C=individuals have been reared under non-UVR for more than 150 generations; U=individuals have been reared under UVR for more than 150 generations.
- Grandparental: Treatment in the grandparental generation: C=Non-UVR exposure; U=UVR exposure.
- Parental: Treatment in the parental generation: C=Non-UVR exposure; U=UVR exposure.
- Offspring: Treatment in the offspring: C=Non-UVR exposure; U=UVR exposure.
- JARID: Jar identity that held the initial stock populations.
- ID: ID code of each investigated individual.
- Treatment: Different treatment combinations of the past and current light conditions: C=Non-UVR exposure; U=UVR exposure.
- Sub.line: Indicate the maternal line.
- Age.at.Maturation: Age at maturation in days.
- Clutch1: Number of offspring born from the first clutch.
- Clutch2: Number of offspring born from the second clutch.
- Clutch3: Number of offspring born from the third clutch.
- Clutch4: Number of offspring born from the fourth clutch.
- Total_offspring: Total number of offspring born from the first four clutches.
- Body.length: Individual body length measured from the top of the head to the origin of the tail spine (mm).
- Absolute.eye.size: Absolute eye size measured at the widest distance between ommatidium representing the largest dimension of the eye (mm).
- Relative.eye.size: Indicate the ratio between absolute eye size and body length.
- Swimming.speed: The mean swimming speed during UVR exposure (mm/s).
- Mean.depth: The mean values of depth position in the water column during the exposure to UVR (mm).
- std.resid: The standardized residuals from the linear regression between absolute eye size and body length for each group.
File: Rscript.R
Description: R code used for statistical analyses and figure generation.
Code/software
R environment version 4.4.2
