Data for: Ontogenetic and geographic phytochemical variation in Mimulus moschatus, a perennial monkeyflower
Data files
Nov 07, 2025 version files 60.08 KB
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Kooyers_et_al_2017_simplified.csv
3.96 KB
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mos_gutt_PPG_pops.csv
1.31 KB
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musky_monk_env.csv
192 B
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musky_PPG_analyses.R
34.13 KB
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Musky_PPG_conc.csv
3.95 KB
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PPG_cor_TableS2.csv
1.38 KB
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PPG_mean_SD_TableS1.csv
2.41 KB
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PPG_NMDS_var_TableS3.csv
940 B
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README.md
11.80 KB
Abstract
Secondary metabolites are critical to plant defenses and frequently exhibit variation among populations associated with heterogeneous climatic factors and/or herbivore communities. We examined genetic-based geographic and ontogenetic variation in phenylpropanoid glycoside (PPG) concentrations and arsenals in Mimulus moschatus, a perennial monkeyflower native to western North America. We conducted a greenhouse common garden with maternal lines collected from three populations sampled along a latitudinal gradient paralleling spatial sampling from a previous study in the closely related congener, Mimulus guttatus. We assessed PPG arsenals as well as concentrations of individual and total PPGs within leaf tissue from two developmental stages. Populations differed in total concentration and arsenal composition of PPGs, with the populations from intermediate latitudes exhibiting higher concentrations than higher and lower latitude populations. Leaves from earlier developmental stages had higher overall PPG concentrations than leaves from later developmental stages across all populations, suggesting juvenile tissue is better defended than more mature tissue. Spatial patterns in relative PPG concentrations and arsenal composition tightly paralleled those in the closely related M. guttatus across space despite consistently lower total PPG concentrations in M. moschatus. Because we did not measure herbivory and our sample size is limited, these results should be interpreted cautiously. Nonetheless, they provide baseline data for understanding geographic and developmental variation in chemical defenses and generate hypotheses about environmental influences and potential convergence in defenses among closely related species.
This README_OGPV.txt file was generated on 2025-06-28 by Simon Innes.
GENERAL INFORMATION
- Title of Dataset: “Data for: Ontogenetic and geographic phytochemical variation in Mimulus moschatus, a perennial monkeyflower.”
- Author Information:
Corresponding author
Name: Simon Innes
Institution: University of Louisiana at Lafayette
Email: simon.innesz@gmail.com
Co-author
Name: Liza Holeski
Institution: Northern Arizona University
Senior author
Name: Nicholas Kooyers
Institution: University of Louisiana at Lafayette
- Date of data collection: 2021
- Geographic location of data collection: see musky_monk_env.csv & Kooyers_et_al_2017_simplified.csv
- Unit of measure for concentrations: Individual and total PPG concentrations are calculated as milligrams of compound per gram of dry leaf tissue.
- Funding: This work was funded by a National Science Foundation CAREER grant (DEB-2045643) awarded to NJK.
DATA AND FILE OVERVIEW
- File list:
File 1: "Musky_PPG_conc.csv"
Description: Raw data of total and individual PPG concentrations for each Mimulus moschatus sample.
File 2: "musky_monk_env.csv"
Description: Geographic locations and metadata for sampled Mimulus moschatus populations.
File 3: "mos_gutt_PPG_pops.csv"
Description: Geographic locations of Mimulus guttatus populations from Kooyer et al. (2017) and M. moschatus populations from present study.
File 4: "Kooyers_et_al_2017_simplified.csv"
Description: Simplified dataset of raw total and individual PPG concentrations of Mimulus guttatus samples from populations included in this study.
File 5: "PPG_mean_SD_TableS1.csv"
Description: Summary of means and standard deviations of Mimulus moschatus PPGs across populations and ontogeny.
File 6: "PPG_cor_TableS2.csv"
Description: Summary of correlations and associated p-values among individual and total PPGs of Mimulus moschatus.
File 7: "PPG_NMDS_var_TableS3.csv"
Description: Summary of explanatory power of individual Mimulus moschatus PPGs on non-metric multidimensional scaling (NMDS) dimensions.
DATA SPECIFIC INFORMATION FOR: "Musky_PPG_conc.csv"
- Number of variables: 15
- Number of cases/rows: 48
- Variable List:
Sample Name: Sample specific identification number
PPG b: Concentration of PPG b
PPG c: Concentration of PPG c
PPG d: Concentration of PPG d
PPG e: Concentration of PPG e
PPG f: Concentration of PPG f
PPG g: Concentration of PPG g
PPG h: Concentration of PPG h
Calc A: Concentration of calceolarioside A
Conand: Concentration of conandroside
Verb: Concentration of verbascoside
Calc B: Concentration of calceolarioside B
Mimulo: Concentration of mimuloside
Unkn 16: Concentration of unknown PPG 16
Total PPGs: Concentration of total PPGs - Missing data codes:
none - Specialized formats or other abbreviations used:
PPG: Phenylpropanoid glycoside
Calc A: Calceolarioside A
Conand: Conandroside
Verb: Verbascoside
Calc B: Calceolarioside B
Mimulo: Mimuloside
Unkn 16: Unkown phenylpropanoid glycoside 16
PPGs: Phenylpropanoid glycosides
DATA SPECIFIC INFORMATION FOR: "musky_monk_env.csv"
- Number of variables: 6
- Number of cases/rows: 3
- Variable List:
pop_name: Unique population name
pop_num: Unique population number
latitude: Latitudinal coordinates of population in decimal degrees
longitude: Longitudinal coordinates of population in decimal degrees
elevation_m: Elevation of population in meters
range: Categorical variable describing the region where a population was sampled (three levels) - Missing data codes:
none - Specialized formats or other abbreviations used:
PPG: Phenylpropanoid glycoside
pop: Population
num: Number
m: Meter
DATA SPECIFIC INFORMATION FOR: "mos_gutt_PPG_pops.csv"
- Number of variables: 5
- Number of cases/rows: 38
- Variable List:
pop_name: Unique population name
latitude: Latitudinal coordinates of population in decimal degrees
longitude: Longitudinal coordinates of population in decimal degrees
elevation_m: Elevation of population in meters
species: Categorical variable descirbing the species identity (mos vs. gutt; two levels) - Missing data codes:
none - Specialized formats or other abbreviations used:
pop: Population
m: Meter
mos: Mimulus moschatus
gutt: Mimulus guttatus
DATA SPECIFIC INFORMATION FOR: "Kooyers_et_al_2017_simplified.csv"
- Number of variables: 16
- Number of cases/rows: 23
- Variable List:
pop_name: Unique population name
ind: Unique indentifer corresponding to a maternal line within a population
rep: Unique identifier corresponding to a replicate within a maternal line
Unkn 10: Concentration of unknown PPG 10
Calc A: Concentration of calceolarioside A
Conand: Concentration of conandroside
Verb: Concentration of verbascoside
Calc B: Concentration of calceolarioside B
Mimulo: Concentration of mimuloside
Unkn 16: Concentration of unknown PPG 16
Total PPGs: Concentration of total PPGs
latitude: Latitudinal coordinates of population in decimal degrees
longitude: Longitudinal coordinates of population in decimal degrees
elevation_m: Elevation in meters
species: Categorical variable descirbing the species identity (gutt; one level)
range: Categorical variable describing the region where a population was sampled (three levels) - Missing data codes:
none - Specialized formats or other abbreviations used:
pop: Population
ind: Individual
rep: Replicate
Calc A: Calceolarioside A
Conand: Conandroside
Verb: Verbascoside
Calc B: Calceolarioside B
Mimulo: Mimuloside
Unkn 16: Unkown phenylpropanoid glycoside 16
PPGs: Phenylpropanoid glycosides
m: Meter
gutt: Mimulus guttatus
DATA SPECIFIC INFORMATION FOR: "PPG_mean_SD_TableS1.csv"
- Number of variables: 30
- Number of cases/rows: 6
- Variable List:
Population: Unique population name
Ontogeny: Developmental stage of leaf sample (early vs. late; two levels)
PPG b_mean: Mean concentration of PPG b
PPG b_sd: Standard deviation of PPG b concentration
PPG c_mean: Mean concentration of PPG c
PPG c_sd: Standard deviation of PPG c concentration
PPG d_mean: Mean concentration of PPG d
PPG d_sd: Standard deviation of PPG d concentration
PPG e_mean: Mean concentration of PPG e
PPG e_sd: Standard deviation of PPG e concentration
PPG f_mean: Mean concentration of PPG f
PPG f_sd: Standard deviation of PPG f concentration
PPG g_mean: Mean concentration of PPG g
PPG g_sd: Standard deviation of PPG g concentration
PPG h_mean: Mean concentration of PPG h
PPG h_sd: Standard deviation of PPG h concentration
Calc A_mean: Mean concentration of calceolarioside A
Calc A_sd: Standard deviation of calceolarioside A concentration
Conand_mean: Mean concentration of conandroside
Conand_sd: Standard deviation of conandroside concentration
Verb_mean: Mean concentration of verbascoside
Verb_sd: Standard deviation of verbascoside concentration
Calc B_mean: Mean concentration of calceolarioside B
Calc B_sd: Standard deviation of calceolarioside B concentration
Mimulo_mean: Mean concentration of mimuloside
Mimulo_sd: Standard deviation of mimuloside concentration
Unkn 16_mean: Mean concentration of unknown PPG 16
Unkn 16_sd: Standard deviation of unknown PPG 16 concentration
Total PPGs_mean: Mean concentration of total PPGs
Total PPGs_sd: Standard deviation of total PPGs concentration - Missing data codes:
none - Specialized formats or other abbreviations used:
PPG: Phenylpropanoid glycoside
Calc A: Calceolarioside A
Conand: Conandroside
Verb: Verbascoside
Calc B: Calceolarioside B
Mimulo: Mimuloside
Unkn 16: Unkown phenylpropanoid glycoside 16
PPGs: Phenylpropanoid glycosides
sd: Standard deviation
DATA SPECIFIC INFORMATION FOR: "PPG_cor_TableS2.csv"
- Number of variables: 15
- Number of cases/rows: 14
- Variable List:
PPG: Name of individual PPGs or total PPGs
Total PPGs: Correlations and p-values of total PPGs with individual and total PPGs
Calc A: Correlations and p-values of calceolarioside A with individual and total PPGs
Conand: Correlations and p-values of conandroside with individual and total PPGs
Verb: Correlations and p-values of verbascoside with individual and total PPGs
Calc B: Correlations and p-values of verbascoside with individual and total PPGs
Mimulo: Correlations and p-values of mimuloside with individual and total PPGs
Unkn 16: Correlations and p-values of unknown PPG 16 with individual and total PPGs
PPG b: Correlations and p-values of PPG b with individual and total PPGs
PPG c: Correlations and p-values of PPG c with individual and total PPGs
PPG d: Correlations and p-values of PPG d with individual and total PPGs
PPG e: Correlations and p-values of PPG e with individual and total PPGs
PPG f: Correlations and p-values of PPG f with individual and total PPGs
PPG g: Correlations and p-values of PPG g with individual and total PPGs
PPG h: Correlations and p-values of PPG h with individual and total PPGs - Missing data codes:
none - Specialized formats or other abbreviations used:
PPG: Phenylpropanoid glycoside
Calc A: Calceolarioside A
Conand: Conandroside
Verb: Verbascoside
Calc B: Calceolarioside B
Mimulo: Mimuloside
Unkn 16: Unkown phenylpropanoid glycoside 16
PPGs: Phenylpropanoid glycosides
DATA SPECIFIC INFORMATION FOR: "PPG_NMDS_var_TableS3.csv"
- Number of variables: 5
- Number of cases/rows: 13
- Variable List:
PPG: Name of individual PPGs
NMDS1: Correlation coefficients of NMDS1 axis for each PPG
NMDS2: Correlation coefficients of NMDS2 axis for each PPG
R2: Strength of association between individual PPGs and the NMDS ordination
P: Significance of association between individual PPGs and the NMDS ordination - Missing data codes:
none - Specialized formats or other abbreviations used:
NMDS: Non-metric multidimensional sacaling
PPG: Phenylpropanoid glycoside
Calc A: Calceolarioside A
Conand: Conandroside
Verb: Verbascoside
Calc B: Calceolarioside B
Mimulo: Mimuloside
Unkn 16: Unkown phenylpropanoid glycoside 16
PPGs: Phenylpropanoid glycosides
