Habitat perforation changes bat species composition and acoustic activity in forest remnants
Data files
Jun 10, 2026 version files 53.26 MB
-
Acoustic_pulse_metrics.csv
53.22 MB
-
bat_morphometrics.csv
9.14 KB
-
harp_trap_bat_counts.csv
634 B
-
mist_nets_bat_counts.csv
924 B
-
README.md
12.09 KB
-
Vegetation_structures.csv
14.75 KB
Abstract
Agroforest perforation is a form of land-use change that introduces small clearings within otherwise continuous forests, often representing the initial stage of habitat fragmentation, intensifying edge effects. Despite its prevalence in human-modified protected landscapes, biodiversity responses to perforation remain poorly studied, limiting understanding of how early structural changes shape species persistence before extensive forest loss. Bats are widely used as sensitive indicators of habitat modification and show ensemble and species-specific responses. We investigated how intact forest and a gradient of early (agroforest perforations) to advanced (tea plantations) habitat modification shape (1) bat species composition, (2) acoustic activity, and (3) the response of a widespread insectivorous species, Hipposideros lankadiva. The study was conducted in three protected areas (PAs) in Northeast Bangladesh. We surveyed bats using mist nets and harp traps at two localities per land-use. We collected echolocation calls along 1000m line transects, with six sampling points within each transect, where acoustic recordings were conducted for 10 minutes at each point. Transects were replicated across three land-use types, resulting in a total of 36 transects and 72 replicate surveys conducted across three PAs. We define bat acoustic activity as the number of echolocation pulses recorded in ten minutes at each transect point in each replicate which provides a relative measure of bat activity across land-use types. We randomly selected vegetation plots at each trapping location to quantify vegetation structure and assess its influence on bat community responses across land‑use types. In total, we captured 712 individuals across 16 species from five families. Mist nets primarily captured edge/gap-adapted frugivorous and nectarivorous bats, whereas harp traps recorded forest interior and edge/gap insectivorous species. We found forest interior insectivorous bats remain associated with forest. Forest interior insectivorous bats remained strongly associated with forest habitats. Canopy cover, canopy height, understory density, and fallen log metrics collectively captured the major structural differences between forest and perforated habitats and explained observed variation in species composition. Acoustic data revealed significantly higher acoustic activity in tea plantations, dominated by edge/gap and open-space foragers. H. lankadiva exhibited comparable acoustic activity across land-use types, indicating generalist foraging behavior. Overall, acoustic data indicated that bat activity in perforations similar to intact forests, and supported disturbance-tolerant ensembles, however, capture data identified early compositional filtering by increased generalist fruit-eating bats and loss of forest interior specialists. These findings show that while perforations introduce early compositional shifts, intact forest remnants within PAs remain irreplaceable for conserving forest interior bat diversity during the early stages of fragmentation.
Dataset DOI: 10.5061/dryad.gf1vhhn42
Title: Agroforest perforations of forest remnants threaten forest interior bat diversity in a highly modified landscape
Author(s)
- Md Ashraf Ul Hasan
Department of Biological Sciences, Texas Tech University Lubbock, Texas, USA
Email: md-ashraf.ul-hasan@ttu.edu
Alternative email: ashrafulhasan.jnu403@gmail.com - Tigga Kingston
Department of Biological Sciences, Texas Tech University Lubbock, Texas, USA
and
Department of Evolution, Ecology, and Behavior, University of Illinois, Urbana, Illinois, USA
Email: tiggak@illinois.edu
Description of the data and file structure
Dataset overview
This dataset contains five tabular data files used to understand how habitat perforation affects bat community structure and acoustic activity in a highly modified landscape. Bat capture data include individuals captured using mist nets and harp traps. Morphometric measurement data include the number of individuals captured from the study area (Country: Bangladesh; Study areas: Rema–Kalenga Wildlife Sanctuary, Lawachara National Park, and Satchari National Park; Study duration: 2022–2023) and their corresponding morphometric measurements. Vegetation data include all vegetation parameters collected from randomly selected 10 m × 10 m plots at each trapping location. Acoustic data include echolocation pulses recorded at specific sampling points along transects, along with acoustic parameters used in the analyses to evaluate how bat acoustic activity responds to habitat perforation and extreme habitat modification around protected areas.
Missing-value codes:
Originally empty cells were replaced with "null" In this dataset, "null" means that no value was recorded for that cell. Cells coded as NA mean not applicable. Neither "null" nor NA represents a measured value or zero.
File: Acoustic_pulse_metrics.csv
Description:
Pulse‑level acoustic parameters extracted from .wav audio files generated every 15 seconds using Anabat Insight v2.1.5‑0 during bat echolocation surveys in Bangladesh. Originally empty cells were replaced with "null" meaning no value was recorded. Cells coded as "NA" mean not applicable.
Variables:
- PA: Protected area where acoustic sampling was conducted. RWS = Rema–Kalenga Wildlife Sanctuary; LNP = Lawachara National Park; SNP = Satchari National Park.
- Habitat: Habitat or land-use category sampled.
- Transect: Transect identifier.
- Replicates: Sampling replicate identifier or replicate number.
- FileName: Name of the original audio file from which acoustic measurements were extracted.
- Sample Point: Acoustic sampling-point identifier.
- Number of echolocation pulse: Number of echolocation pulses recorded or retained for that file or sample.
- Fc.kHz: Characteristic frequency of the pulse, in kilohertz.
- Sc.OPS: Characteristic slope of the pulse, in octaves per second.
- Dur.ms: Pulse duration, in milliseconds.
- Fmax.kHz: Maximum frequency of the pulse, in kilohertz.
- Fmin.kHz: Minimum frequency of the pulse, in kilohertz.
- Fmean.kHz: Mean frequency of the pulse, in kilohertz.
- IPG.ms: Inter-pulse gap, in milliseconds.
- TBCS.ms: Time between call starts, in milliseconds.
- Fk.kHz: Frequency of the knee of the pulse, in kilohertz.
- Tk.ms: Time from the start of the pulse to the knee, in milliseconds.
- Quality..: Pulse-quality metric generated by Anabat Insight. In Anabat Insight, Quality represents the average smoothness of the call.
- S1.OPS: Slope of the first five points in the pulse, in octaves per second.
- Tc.ms: Time from the start of the pulse to the characteristic section, in milliseconds.
- Curvature: Shape metric of the pulse. Positive values indicate upward curvature and negative values indicate downward curvature.
- Fstart.kHz: Frequency at the start of the pulse, in kilohertz.
- Fend.kHz: Frequency at the end of the pulse, in kilohertz.
File: harp_trap_bat_counts.csv
Description:
Bats captured using harp traps in twelve study sites in three protected areas (Rema-Kalenga Wildlife Sanctuary: RWS; Lawachara National Park: LNP; and Satchari National Park: SNP) in Bangladesh during 2022-2023.
Variables:
- Species: Scientific name of the bat species captured using harp traps.
- Forest-1 site-1 / RWS1.1: Number of individuals captured at forest site 1 in Rema–Kalenga Wildlife Sanctuary.
- Forest-1 site-2 / RWS1.2: Number of individuals captured at forest site 2 in Rema–Kalenga Wildlife Sanctuary.
- Perforation-1 site-1 / RWS2.1: Number of individuals captured at perforation site 1 in Rema–Kalenga Wildlife Sanctuary.
- Perforation-1 site-2 / RWS2.2: Number of individuals captured at perforation site 2 in Rema–Kalenga Wildlife Sanctuary.
- Forest-2 site-1 / LNP1.1: Number of individuals captured at forest site 1 in Lawachara National Park.
- Forest-2 site-2 / LNP1.2: Number of individuals captured at forest site 2 in Lawachara National Park.
- Perforation-2 site-1 / LNP2.1: Number of individuals captured at perforation site 1 in Lawachara National Park.
- Perforation-2 site-2 / LNP2.2: Number of individuals captured at perforation site 2 in Lawachara National Park.
- Forest-3 site-1 / SNP1.1: Number of individuals captured at forest site 1 in Satchari National Park.
- Forest-3 site-2 / SNP1.2: Number of individuals captured at forest site 2 in Satchari National Park.
- Perforation-3 site-1 / SNP2.1: Number of individuals captured at perforation site 1 in Satchari National Park.
- Perforation-3 site-2 / SNP2.2: Number of individuals captured at perforation site 2 in Satchari National Park.
File: mist_nets_bat_counts.csv
Description:
Bats captured using mist nets in twelve study sites in three protected areas (Rema-Kalenga Wildlife Sanctuary: RWS; Lawachara National Park: LNP; and Satchari National Park: SNP) in Bangladesh during 2022-2023.
Variables:
- species: Scientific name of the bat species captured using mist nets.
- Forest-1 site-1 / RWS1.1: Number of individuals captured at forest site 1 in Rema–Kalenga Wildlife Sanctuary.
- Forest-1 site-2 / RWS1.2: Number of individuals captured at forest site 2 in Rema–Kalenga Wildlife Sanctuary.
- Perforation-1 site-1 / RWS2.1: Number of individuals captured at perforation site 1 in Rema–Kalenga Wildlife Sanctuary.
- Perforation-1 site-2 / RWS2.2: Number of individuals captured at perforation site 2 in Rema–Kalenga Wildlife Sanctuary.
- Forest-2 site-1 / LNP1.1: Number of individuals captured at forest site 1 in Lawachara National Park.
- Forest-2 site-2 / LNP1.2: Number of individuals captured at forest site 2 in Lawachara National Park.
- Perforation-2 site-1 / LNP2.1: Number of individuals captured at perforation site 1 in Lawachara National Park.
- Perforation-2 site-2 / LNP2.2: Number of individuals captured at perforation site 2 in Lawachara National Park.
- Forest-3 site-1 / SNP1.1: Number of individuals captured at forest site 1 in Satchari National Park.
- Forest-3 site-2 / SNP1.2: Number of individuals captured at forest site 2 in Satchari National Park.
- Perforation-3 site-1 / SNP2.1: Number of individuals captured at perforation site 1 in Satchari National Park.
- Perforation-3 site-2 / SNP2.2: Number of individuals captured at perforation site 2 in Satchari National Park.
file name: bat_morphometrics.csv
Description:
Morphometric measurements of bats (in millimeter) and body mass (in gram) captured in Bangladesh during the study period (2022 - 2023). Originally empty cells were replaced with "null", meaning no value was recorded.
Variables:
- Family: Bat family.
- Species: Scientific name of the bat species.
- Number of Individual: Number of individuals measured for the species.
- Min of Head-Body Length: Minimum head-body length, in millimeters.
- Max of Head-Body Length: Maximum head-body length, in millimeters.
- Mean of Head-Body Length: Mean head-body length, in millimeters.
- Min of Tail Length: Minimum tail length, in millimeters.
- Max of Tail Length: Maximum tail length, in millimeters.
- Mean of Tail Length: Mean tail length, in millimeters.
- Min of Total Length: Minimum total body length, in millimeters.
- Max of Total Length: Maximum total body length, in millimeters.
- Mean of Total Length: Mean total body length, in millimeters.
- Min of Forearm: Minimum forearm length, in millimeters.
- Max of Forearm: Maximum forearm length, in millimeters.
- Mean of Forearm: Mean forearm length, in millimeters.
- Min of Ear: Minimum ear length, in millimeters.
- Max of Ear: Maximum ear length, in millimeters.
- Mean of Ear: Mean ear length, in millimeters.
- Min of Tragus: Minimum tragus length, in millimeters.
- Max of Tragus: Maximum tragus length, in millimeters.
- Mean of Tragus: Mean tragus length, in millimeters.
- Min of Tibia: Minimum tibia length, in millimeters.
- Max of Tibia: Maximum tibia length, in millimeters.
- Mean of Tibia: Mean tibia length, in millimeters.
- Min of Hind-Foot: Minimum hind-foot length, in millimeters.
- Max of Hind-Foot: Maximum hind-foot length, in millimeters.
- Mean of Hind-Foot: Mean hind-foot length, in millimeters.
- Min of Weight: Minimum body mass, in grams.
- Max of Weight: Maximum body mass, in grams.
- Mean of Weight: Mean body mass, in grams.
file name: Vegetation_structures.csv
Description:
Vegetation data collected 5 meters from each trapping point within a 10 × 10 meter plot.
Variables:
- Habitat: Habitat or land-use category where vegetation data were collected.
- Site: Sampling site identifier.
- Trap_type: Type of bat-trapping method used at the sampling point.
- CanopyCover: Estimated canopy cover at the sampling point or vegetation plot, expressed as a percentage.
- Largest_treeCBH_(cm): Circumference at breast height of the largest tree recorded in the plot, in centimeters.
- Canopy_height(m): Estimated canopy height, in meters.
- Ground_(<1m): Vegetation-cover category for the ground layer below 1 m. Scale: 1 = 0–25% cover; 2 = 26–50% cover; 3 = 51–75% cover; 4 = 76–100% cover.
- Understory_(1-5m): Vegetation-cover category for the understory layer from 1 to 5 m. Scale: 1 = 0–25% cover; 2 = 26–50% cover; 3 = 51–75% cover; 4 = 76–100% cover.
- Midstory_(5-20m): Vegetation-cover category for the midstory layer from 5 to 20 m. Scale: 1 = 0–25% cover; 2 = 26–50% cover; 3 = 51–75% cover; 4 = 76–100% cover.
- Canopy_(>20m): Vegetation-cover category for the canopy layer above 20 m. Scale: 1 = 1–25% cover; 2 = 26–50% cover; 3 = 51–75% cover; 4 = 76–100% cover.
- Fallen_log_length(cm): Length of fallen log recorded in the plot, in centimeters.
- Fallen_log_circum(cm): Circumference of fallen log recorded in the plot, in centimeters.
- Tree_cavity_length: Length of tree cavity recorded in the plot, in centimeters.
- Tree_cavity_width: Width of tree cavity recorded in the plot, in centimeters.
- ForestCover%: Forest cover associated with the sampling location, expressed as a percentage.
Funding
Md Ashraf Ul Hasan received funding from Rufford Foundation (RSG 33839-1), Bat Conservation International, American Society of Mammalogists, Texas Tech Graduate Student Research Support, and Michelle C. Knapp Memorial Scholarship, Department of Biological Sciences, Texas Tech University. Partial equipment of the study was provided by Kingston Lab at Texas Tech University (now at University of Illinois). Sample collection vials, TK numbers, and tags were provided by Natural Science Research Laboratory at Texas Tech University. Museum space was provided by Department of Zoology, Jagannath University, Bangladesh.
Access information
Other publicly accessible locations of the data:
- N/A
Data was derived from the following sources:
- N/A
