Jellyfish blooms restructure plankton dynamics and trophic linkages in coastal waters
Data files
Mar 09, 2026 version files 47.80 KB
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gut_content_analysis.xlsx
10.79 KB
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phytoplankton_zooplankton_jellyfish_Chlorophyll_a.xlsx
17.71 KB
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README.md
3.40 KB
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temperature_salinity_pH_nutrient.xlsx
15.90 KB
Abstract
Jellyfish blooms are increasing globally in frequency and intensity, introducing complex ecological interactions, yet the mechanisms by which they alter ecosystem structure remain poorly characterized due to a lack of sustained field observations.
We conducted targeted time-series observations in Jiaozhou Bay—a representative coastal ecosystem experiencing Aurelia coerulea blooms—tracking temporal responses of plankton communities and trophic interactions to jellyfish population fluctuations. A total of 36 surveys were conducted over three years from 2021 to 2023, yielding comprehensive datasets on biological variables (jellyfish biomass, zooplankton abundance and composition, phytoplankton abundance and composition), environmental factors (temperature, salinity, pH), and nutrient concentrations in the study area. Additionally, we obtained datasets on the gastric content composition of field-collected A. coerulea through stomach dissection analysis. We further quantified the dual roles of jellyfish as top-down predators and bottom-up nutrient regenerators, linking bloom dynamics to changes in plankton structure and biogeochemical cycling. Our results revealed that during periods of high A. coerulea aggregation, the structure of the plankton community changed markedly, characterized by a sharp decline in zooplankton coupled with the proliferation of phytoplankton. This top-down feeding effect triggered potential cascading impacts, decoupling trophic pathways by weakening zooplankton-mediated energy transfer and releasing phytoplankton from grazing pressure. Concurrently, jellyfish contributed to biogeochemical processes by releasing bioavailable ammonium and phosphate, with phosphate regeneration playing a particularly critical role in stimulating primary production.
Dataset DOI: 10.5061/dryad.gqnk98t38
Description of the data and file structure
We have submitted the following raw data files:
gut_content_analysis.xlsx: Contains data on the stomach contents of Aurelia coerulea, including sampling year, month, study area, jellyfish umbrella diameter (mm), and the number of copepods identified via dissection.temperature_salinity_pH_nutrient.xlsx: Includes triplicate measurements of basic environmental parameters collected during each survey, including temperature, salinity, pH, and concentrations of five nutrients (silicate, phosphate, nitrate, nitrite, and ammonium; unit: μmol L⁻¹) in the water column.phytoplankton_zooplankton_jellyfish_Chlorophyll_a.xlsx: Provides biological data, including:- Abundance of phytoplankton (dinoflagellates and diatoms; ind L⁻¹) and chlorophyll a concentration (μg L⁻¹);
- Abundance of major zooplankton groups (copepods, Chaetognatha, Tunicata, small medusae, and others; ind 100 m⁻³);
- Biomass of Aurelia coerulea (g m⁻³) collected during surveys.
This dataset encompasses biological and environmental data collected from fixed survey stations in Jiaozhou Bay (China) from 2021 to 2023. The biological parameters include interannual and seasonal variations in the biomass of Aurelia coerulea (moon jellyfish), zooplankton community structure and dynamics, phytoplankton (diatom and dinoflagellate) abundance, and chlorophyll-a concentrations. The environmental data comprise temperature, salinity, pH, and various nutrient concentrations. Additionally, the dataset includes stomach content analysis data from field-collected Aurelia coerulea specimens.
gut content analysis_Data:
- Year: Survey year, from 2021 to 2023
- Month: Survey time point
- Area: Study area, Jiaozhou Bay, located in the Yellow Sea, China
- Jellyfish: Bloom-forming jellyfish species studied—Aurelia coerulea; NA indicates that no jellyfish individuals were collected during the survey time point
- Diameter: Umbrella diameter of jellyfish used for gut content analysis (mm)
- Number of copepods: Number of copepods found in the gut contents during dissection
phytoplankton+zooplankton+jellyfish+Chlorophyll a_Data:
- Phytoplankton: Abundance of dinoflagellates and diatoms (ind L⁻¹); chlorophyll a concentration (µg L⁻¹) was simultaneously measured and analyzed.
- Zooplankton: Abundance data (ind 100 m⁻³) for key zooplankton groups collected at each sampling time point, including copepods, Chaetognatha, Tunicata, small medusae, and others (primarily crab and shrimp larvae, bivalve veligers).
- Jellyfish biomass: Biomass data (g m⁻³) of Aurelia coerulea collected during surveys at each sampling station.
temperature+salinity+pH+nutrient_Data: This dataset contains basic environmental parameters collected from the study area, including temperature, salinity, pH, and the concentrations of five nutrients (silicate, phosphate, nitrate, nitrite, and ammonium; unit: μmol L⁻¹) in the water column. Each variable was measured in triplicate at every sampling time point.
Code/software
This dataset is stored in a tabular format and does not require any other special software to read.
1. Study area and investigated time
Jiaozhou Bay, located in the Yellow Sea, China, is a shallow, semi-enclosed coastal system that is heavily influenced by anthropogenic activities The study area (mean depth of ~4 m) has been established as a reference site for long-term ecological monitoring (Sun et al., 2011). It also serves as a nursery ground for Aurelia coerulea and experiences recurrent seasonal jellyfish blooms (Wang et al., 2021), making it representative for assessing the ecological impacts of jellyfish blooms in Jiaozhou Bay. From 2021 to 2023, we implemented a fixed site temporal monitoring program to control spatial variability, synchronously capturing coupled measurements of environmental conditions, jellyfish biomass, plankton communities, and nutrient dynamics. Given the strong seasonality and interannual variability of A. coerulea blooms (Wang and Sun, 2015), multiyear, site-specific monitoring allowed us to capture temporal ecological responses while eliminating spatial heterogeneity in plankton and nutrient distributions (Wang et al., 2024). By comparing seasonal variations between bloom and non-bloom years, we examined jellyfish bloom-associated shifts in ecosystem structures under consistent spatial conditions.
Strobilation of A. coerulea polyps begins in April, with young medusae appearing in May; sexual maturity is reached by mid-summer, followed by a population decline in August (Wang and Sun, 2015). Our surveys spanned April to September each year, comprising 12 sampling events annually, with intensified sampling (3 time points per month) during peak bloom periods (June-August). Based on monitoring data, we classified 2021-2022 as non-bloom years and 2023 as a jellyfish bloom year, with mid-June to mid-July designated as the jellyfish bloom stage (abundance exceeded 1 ind m⁻³) for interannual comparisons.
2. Hydrological and biological parameters
2.1 Hydrological parameters
Hydrological parameters, including temperature (°C), salinity, and pH, were measured in triplicate at each sampling using a AAQ1183-1F CTD (Alec Electronics Co., Japan).
2.2 Population ofAurelia coerulea
The abundance of medusae (ind m⁻³) was estimated through visual surveys following Yoon et al. (2007). All surveys were carried out in the morning. The medusae were then randomly collected using a hand net (1-mm mesh) to measure bell diameter (D, mm). Biomass (g m⁻³) was calculated using the regression equation established by Uye and Shimauchi (2005), relating bell diameter to wet weight (WW, g).
2.3 Nutrients
Triplicate water samples for inorganic nutrient analysis (silicate (Si), phosphate (P), nitrate (NO₃⁻), nitrite (NO₂⁻), and ammonium (NH₄⁺)) were collected and filtered through a 0.45-μm mixed cellulose ester filter (diameter: 33 mm). The filtered samples were stored in high-density polyethylene bottles and frozen at -20°C for later analysis. Prior to sampling, storage bottles were acid-washed with 10% hydrochloric acid and rinsed with ultrapure water. Nutrient concentrations were determined using flow injection analysis (Technicon AA3 Auto-Analyzer; Bran+Luebbe Co., Germany).
2.4 Chlorophyll a
For chlorophyll a (Chl a) analysis, 1-liter triplicate water samples were collected at each sampling event. The samples were filtered through cellulose ester filters (pore size: 0.45 μm), and 0.2 ml of MgCO₃ was added to each filter to prevent Chl a decomposition. The filters were then frozen at 4 °C and stored in darkness. Chl a was extracted from the filters using 90% acetone, following the method described by Lorenzen (1967), and the concentrations were obtained by a spectrophotometric method (TU-1810 spectrophotometer).
2.5 Plankton assemblages
Phytoplankton (20–160 μm) were analyzed from triplicate 1-L water samples. The samples were first filtered through a 160-μm sieve and immediately preserved with Lugol iodine acid (final concentration 1%) in brown plastic bottles. Phytoplankton were identified and counted under an inverted microscope (Olympus IX71), classified into diatoms and dinoflagellates, and reported as abundance per liter (ind L⁻¹). Zooplankton (>160 μm) were collected by vertical tows from bottom to surface using a 160-μm mesh plankton net (mouth area: 0.08 m²) and preserved in 5% neutral formalin. Organisms were classified into copepods, small medusae (siphonophores and hydromedusae), chaetognaths, tunicates, and other taxa (for example, crab and shrimp larvae, bivalve veligers). Abundance was determined using a stereomicroscope (Nikon SMZ745, Tokyo, Japan) and expressed per cubic meter (ind m⁻³).
3. Gut content analysis
A total of 62 undamaged** medusae were collected throughout the study period 2023 for gut content analysis (GCA). The medusae were immediately preserved in 5% neutral formalin in 20-μm filtered seawater. Prior to GCA, each medusa was gently rinsed with ultrapure water to remove any externally attached prey, and bell diameters were recorded. Gastric pouches were exposed by carefully incising around the gut on the side of the subumbrella. The pouches were rinsed with 20-μm filtered seawater, and the released prey were collected in a 5-L beaker (Wang et al., 2023). Liquid samples were also collected to check for prey items. The prey were concentrated using a 20-μm mesh sieve, then identified and counted under a dissecting microscope (Nikon SMZ745, Japan).
References
Lorenzen, C. J. (1967). Determination of chlorophyll and pheopigments: Spectrophotometric equations. Limnology and Oceanography, 12, 1404-1419.
Sun, X. X., Sun, S., Zhao, Z., & Shen, Z. (2011a). Long-term changes in nutrient concentration and structure in the Jiaozhou Bay. Oceanologia Et Limnologia Sinica, 42(5), 662-669.
Uye, S. I., & Shimauchi, H. (2005). Population biomass, feeding, respiration and growth rates, and carbon budget of the scyphomedusa Aurelia aurita in the Inland Sea of Japan. Journal of Plankton Research, 27(3), 237-248.
Wang, P., Zhang, F., Guo, D., & Sun, S. (2021). Diets and seasonal ingestion rates of Aurelia coerulea (Cnidaria: Scyphozoa) polyps by in situ feeding experiments in Jiaozhou Bay, China. Frontiers in Marine Science, 8.
Wang, W. C., Wang, N., Wang, Y. T., Zhang, F., Sun, X. X., & Sun, S. (2024). Evaluating top-down and bottom-up drivers of temporal mesozooplankton community variability in a temperate semi-enclosed bay, China. Marine Pollution Bulletin, 209, 117149.
Wang, P., Zhang, F., & Sun, S. (2023). Predation effect on copepods by the giant jellyfish Nemopilema nomurai during the early occurrence stage in May in the northern East China Sea and southern Yellow Sea, China. Marine Pollution Bulletin, 186.
Wang, Y. T., & Sun, S. (2015). Population dynamics of Aurelia sp.1 ephyrae and medusae in Jiaozhou Bay, China. Hydrobiologia, 754(1), 147-155.
Yoon, W. D., Yang, J. Y., Shim, M. B., & Kang, H. K. (2007) Physical processes influencing the occurrence of the giant jellyfish Nemopilema nomurai (Scyphozoa: Rhizostomeae) around Jeju Island, Korea. Journal of Plankton Research, 30, 251-260.
