Data and code from: Climate change and biological traits: Interglacial stability and higher glacial functional diversity in late Quaternary molluscan assemblages of the Adriatic Sea (Italy)
Data files
Jul 28, 2026 version files 244.74 KB
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README.md
13.49 KB
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Schweigl_et_al_2026_SuppCode1.R
5.24 KB
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Schweigl_et_al_2026_SuppCode2.R
47.73 KB
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Schweigl_et_al_2026_SuppCode3.R
27.50 KB
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Schweigl_et_al_2026_SuppData2.csv
119.30 KB
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Schweigl_et_al_2026_SuppData3.csv
30.24 KB
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Schweigl_et_al_2026_SuppData4.csv
1.23 KB
Abstract
Studies on the effects of long-term climate change on marine communities are crucial to our understanding of ecosystem resilience. The late Quaternary fossil record, dominated by extant taxa, provides a valuable archive of past biotic responses to major climate fluctuations. While most studies on faunal turnover so far have focused on taxonomic identity, trait-based approaches are becoming increasingly common as they provide a stronger link to ecosystem functioning. We applied biological traits analysis based on a set of ecologically relevant traits to study functional turnover in nearshore molluscan assemblages from the late Quaternary of the Po-Adriatic system (Italy). We found that the functional composition of fossil assemblages from the last two interglacials was statistically indistinguishable. In contrast, the assemblage from the last glacial was characterized by higher functional diversity, as indicated by dispersion, richness, and evenness metrics. Lower diversity in interglacial assemblages is related to the high dominance of the bivalve Lentidium mediterraneum, which strongly impacts the distribution of functional profiles. Functionally distinct species are more evenly distributed in the glacial assemblage, probably because of greater habitat variation coupled with individualistic responses of species to temperature changes. While functional similarity between the assemblages from the last interglacial and the Holocene indicates resilient response to natural climatic shifts, more extreme scenarios of future global warming will likely induce elevated rates of species turnover. Furthermore, additional anthropogenic pressures, including bottom trawling, eutrophication, and invasive species can also affect functional diversity to a higher degree. Thus, biotic responses to late Quaternary climate change documented herein provide a valuable baseline of natural functional variability against which modern and future shifts in nearshore ecosystems of the Adriatic Sea driven by higher rates of warming and other human pressures can be assessed.
Dataset DOI: 10.5061/dryad.j0zpc86xg
Description of the data and file structure
The files provided here are supplementary files of the article titled "Climate change and biological traits: Interglacial stability and higher glacial functional diversity in late Quaternary molluscan assemblages of the Adriatic Sea (Italy)" by Lukas Schweigl, Rafał Nawrot, Vaishnavi Pittala, Michał Kowalewski, and Daniele Scarponi published in Paleobiology.
The study investigated changes in functional composition and diversity of molluscan assemblages from fluvially influenced nearshore settings in the Adriatic Sea during the late Quaternary. For this, the traits of molluscan assemblages from the last interglacial, last glacial and current interglacial (Holocene) were studied using biological traits analysis (BTA). BTA included the application of fuzzy correspondence analysis (FCA), and analyses of changes in Bray-Curtis distances, functional diversity indices, and functional beta diversity across time intervals.
Files and variables
The following two supplementary files are hosted by Zenodo:
File: Schweigl_et_al_2026_SuppMaterial.pdf
Description: This file provides supplementary information to the article including supplementary texts S1-S7, supplementary tables S1-S7, and supplementary figures S1-S8.
File: Schweigl_et_al_2026_SuppData1.pdf
Description: This file provides a list of references used for the compilations of the trait dataset.
All the supplementary files listed below are hosted by Dryad:
File: Schweigl_et_al_2026_SuppData2.csv
Description: This file contains the dataset with sample information and taxon counts.
Variables
| Variable | Description |
|---|---|
| ID | Sample identification number |
| Well | Core label |
| Depth_sampling_m | Sample core depth in meters |
| Time_interval | Time interval to which sample was assigned; CIG_current interglacial, LG_last glacial, LIG_last interglacial |
| Age_ky | Quantiative age estimate of the sample in kyr, for LIG samples no quantitative age estimate is available |
| Ref_Age | Reference on which Ref_Age is based |
| Systems_Tract | Systems tract to which samples was assigned; e-TST_early transgressive systems tract, HST_highstand systems tract, LST_lowstand systems tract |
| Facies_integrated | Previously published sedimentary attribution of sample |
| Ref_Facies | Reference on which Facies_integrated is based |
File: Schweigl_et_al_2026_SuppData3.csv
Description: This file contains the dataset with information and traits for each taxon.
Variables
| Variable | Description/category | Description |
|---|---|---|
| Name | Full name of taxon | |
| Class | Class to which taxon belongs | |
| Family | Family of taxon | |
| Genus_name | Generic name of taxon | |
| Species_name | Specific epithet of taxon | |
| Author | Authors that named the species | |
| Species_level | 0_not identified to specie level, 1_identified to species level | |
| Ecosystem | Ecoystem type in which organism occurs; B_brackish, F_freshwater, L_land (terrestrial), M_marine | |
| Feeding guild | F_hg | herbivore and grazer |
| F_df | deposit and detritus feeder | |
| F_sf | suspension feeder | |
| F_sc | scavenger | |
| F_pr | predator | |
| F_pa | parasitic feeder | |
| F_cs | (chemo-) symbiotic feeder | |
| Motility | M_se | sedentary |
| M_fm | facultatively mobile | |
| M_ts | through sediment | |
| M_bu | living in burrows | |
| M_os | other surfaces | |
| Attachment type | At_un | unattached |
| At_by | byssed | |
| At_ce | cemented | |
| Substrate relation | Su_in | infaunal |
| Su_bo | boring | |
| Su_si | semi-infaunal | |
| Su_ep | epifaunal | |
| Maximum adult body size | S_vs | very small |
| S_sm | small | |
| S_me | medium | |
| S_la | large | |
| S_vl | very large | |
| Type of larval development | L_pl | planktotrophic |
| L_lt | lecithotrophic | |
| L_br | brooding | |
| Vegetation association | Ve_no | no association |
| Ve_pl | plant-associated | |
| Ve_al | algae-associated |
This file contains multiple "NA" cells. "NA" stands for "not applicable". If information on any of the above variables was unavailable for a taxon or not even applicable, "NA" was used. E.g., if a taxon was identified to genus level, the variable "Species_name" was not applicable and thus "NA" was used. For many taxa information on certain traits was unavailable and consequently "NA" was used. For all taxa identified above species level "NA" was used for all traits because traits used in this study were intended to be species-specific.
File: Schweigl_et_al_2026_SuppData4.csv
Description: This file contains the dataset for categorization of trait modalities.
Variables
| Variable | Description |
|---|---|
| F_hg | herbivore and grazer |
| F_df | deposit and detritus feeder |
| F_sf | suspension feeder |
| F_sc | scavenger |
| F_pr | predator |
| F_pa | parasitic feeder |
| F_cs | (chemo-) symbiotic feeder |
| M_se | sedentary |
| M_fm | facultatively mobile |
| M_ts | through sediment |
| M_bu | living in burrows |
| M_os | other surfaces |
| At_un | unattached |
| At_by | byssed |
| At_ce | cemented |
| Su_in | infaunal |
| Su_bo | boring |
| Su_si | semi-infaunal |
| Su_ep | epifaunal |
| S_vs | very small |
| S_sm | small |
| S_me | medium |
| S_la | large |
| S_vl | very large |
| L_pl | planktotrophic |
| L_lt | lecithotrophic |
| L_br | brooding |
| Ve_no | no association |
| Ve_pl | plant-associated |
| Ve_al | algae-associated |
File: Schweigl_et_al_2026_SuppCode1.R
Description: This file provides custom functions in R that were used for the analyses.
File: Schweigl_et_al_2026_SuppCode2.R
Description: This file provides the R code used to perform FCA and Bray-Curtis dissimilarity analysis.
File: Schweigl_et_al_2026_SuppCode3.R
Description: This file provides the R code used to perform functional diversity analysis.
Code/software
Data processing and all subsequent analyses were performed in R statistical environment v. 4.5.2. The following packages were used for the analyses and generation of figures: ade4, combinat, grDevices, mFD, plotrix, vegan. All code used to perform analyses is contained in the files "Schweigl_et_al_2026_SuppCode1", "Schweigl_et_al_2026_SuppCode2" and "Schweigl_et_al_2026_SuppCode3".
