Data from: "Transcriptomic resources for five shrimp (Crustacea: Atyidae and Alpheidae) species from the anchialine ecosystem" in Genomic Resources Notes accepted 1 June 2014 to 31 July 2014
Data files
Oct 27, 2014 version files 1.41 GB
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All_orthologous_clusters.zip
21.78 MB
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Antecaridina_lauensis_TRI_1_20_2014_NORM.fasta
112.21 MB
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Antecaridina_lauensis_TRI_1_20_2014_NORM.fasta.transdecoder.bed
14.68 MB
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Antecaridina_lauensis_TRI_1_20_2014_NORM.fasta.transdecoder.cds
57.85 MB
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Antecaridina_lauensis_TRI_1_20_2014_NORM.fasta.transdecoder.gff3
55.56 MB
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Antecaridina_lauensis_TRI_1_20_2014_NORM.fasta.transdecoder.pep
28.75 MB
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Antecaridina_lauensis_Trinotate_Annotation_Report_Jan2014.tab
71.83 MB
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auto_Trinotate.sh
5.17 KB
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Caridina_rubella_TRI_1_20_2014_NORM.fasta
15.97 MB
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Caridina_rubella_TRI_1_20_2014_NORM.fasta.transdecoder.bed
2.03 MB
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Caridina_rubella_TRI_1_20_2014_NORM.fasta.transdecoder.cds
7.82 MB
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Caridina_rubella_TRI_1_20_2014_NORM.fasta.transdecoder.gff3
7.30 MB
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Caridina_rubella_TRI_1_20_2014_NORM.fasta.transdecoder.pep
3.91 MB
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Caridina_rubella_Trinotate_Annotation_Report_Feb2014.tab
17.62 MB
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cd_hit_data.zip
14.61 MB
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clustalAlign.sh
612 B
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compliantFasta.zip
10.93 MB
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copy_concat_norm_TRI_hudAlpha_HISEQ2500.sh
1.46 KB
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fasta_stats.sh
304 B
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Filtered_subset_orthologous_clusters.zip
1.71 MB
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generate_Trinotate_report.sh
3.72 KB
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Halocaridinides_trigonopthalma_TRI_1_20_2014_NORM.fasta
131.23 MB
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Halocaridinides_trigonopthalma_TRI_1_20_2014_NORM.fasta.transdecoder.bed
21.65 MB
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Halocaridinides_trigonopthalma_TRI_1_20_2014_NORM.fasta.transdecoder.cds
74.93 MB
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Halocaridinides_trigonopthalma_TRI_1_20_2014_NORM.fasta.transdecoder.gff3
81.93 MB
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Halocaridinides_trigonopthalma_TRI_1_20_2014_NORM.fasta.transdecoder.pep
38.99 MB
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Halocaridinides_trigonopthalma_Trinotate_Annotation_Report_Jan2014.tab
79.30 MB
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Mapping.sh
726 B
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Metabetaeus_lohena_TRI_1_17_2014_NORM.fasta
143.09 MB
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Metabetaeus_lohena_TRI_1_17_2014_NORM.fasta.transdecoder.bed
17.94 MB
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Metabetaeus_lohena_TRI_1_17_2014_NORM.fasta.transdecoder.cds
74.17 MB
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Metabetaeus_lohena_TRI_1_17_2014_NORM.fasta.transdecoder.gff3
68.50 MB
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Metabetaeus_lohena_TRI_1_17_2014_NORM.fasta.transdecoder.pep
36.28 MB
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Metabetaeus_lohena_Trinotate_Annotation_Report_Jan2014.tab
74.97 MB
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Metabetaeus_minutus_TRI_1_20_2014_NORM.fasta
28.08 MB
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Metabetaeus_minutus_TRI_1_20_2014_NORM.fasta.transdecoder.bed
5.66 MB
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Metabetaeus_minutus_TRI_1_20_2014_NORM.fasta.transdecoder.cds
18.01 MB
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Metabetaeus_minutus_TRI_1_20_2014_NORM.fasta.transdecoder.gff3
20.13 MB
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Metabetaeus_minutus_TRI_1_20_2014_NORM.fasta.transdecoder.pep
9.66 MB
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Metabetaeus_minutus_Trinotate_Annotation_Report_Jan2014.tab
25.04 MB
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Ortho1.sh
1.64 KB
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Ortho2.sh
400 B
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Remapping_expression.zip
11.42 MB
Abstract
[No abstract entered]