Tuning reductase activity in monoterpene indole alkaloid biosynthesis
Data files
May 30, 2026 version files 22.17 GB
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demultiplex.bc1019_BAK8B_OA--bc1019_BAK8B_OA.hifi_reads.fastq.gz
22.17 GB
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genomestats.jpg
205.84 KB
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README.md
1.06 KB
Abstract
Monoterpene indole alkaloids encompass a diverse class of plant natural products. Many of these valuable compounds, including the anticancer medicines vinblastine and vincristine (Catharanthus roseus) and the antiaddiction treatment ibogaine (Tabernanthe iboga) utilize a common biosynthetic intermediate, 19E-geissoschizine, which is produced by the medium-chain dehydrogenase/reductase geissoschizine synthase (GS). This dataset provides the raw data for the genome of Tabernanthe iboga.
Dataset DOI: 10.5061/dryad.pvmcvdp1m
Description of the data and file structure
Raw reads for PacBio sequencing of Tabernanthe iboga genome.
Obtained at Max Planck Institute of Plant Breeding genome sequencing center.
PacBio sequencing.
Genomestats.jpg shows contig lengths.
Raw reads in standard format in demultiplex.bc1019_BAK8B_OA--bc1019_BAK8B_OA.hifi_reads.fastq
Files and variables
File: demultiplex.bc1019_BAK8B_OA--bc1019_BAK8B_OA.hifi_reads.fastq.gz
Description: Raw reads for PacBio seqeunce of Tabernanthe iboga genome
File: genomestats.jpg
Description: Description of contig number and sizes
Code/software
Compatible with all standard genome analysis software.
For example, PacBio GitHub Tools.
Access information
Other publicly accessible locations of the data:
- none
Data was derived from the following sources:
- Max Planck Institute for Plant Breeding, Genome Center