S1PR1 regulates lymphatic valve development and prevents ileitis-independent tertiary lymphoid organ formation
Data files
May 19, 2025 version files 22.58 GB
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FS38995546.fastq
4.86 GB
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FS38995605.fastq
4.39 GB
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FS38995667.fastq
4.21 GB
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FS38995785.fastq
4.74 GB
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FS38995819.fastq
4.39 GB
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README.md
1.78 KB
Abstract
Dataset DOI: 10.5061/dryad.qbzkh18vj
Description of the data and file structure
S1pr1f/f and Tg(Prox1-CreERT2); S1pr1f/f mice were administered tamoxifen from postnatal days 1-7. Fecal pellets were collected from the mice for metagenomic sequencing when they were 10 months old. The file names and the genotypes of mice are provided below.
FS38995605- Tg(Prox1-CreERT2); S1pr1f/f
FS38995667- Tg(Prox1-CreERT2); S1pr1f/f
FS38995819- S1pr1f/f
FS38995785- S1pr1f/f
FS38995546- S1pr1f/f
Files and variables
File: FS38995605.fastq
Description: Metagenomic analysis of fecal pellets from 10-month-old Tg(Prox1-CreERT2); S1pr1f/f (tamoxifen from P1-7) mouse-1.
File: FS38995667.fastq
Description: Metagenomic analysis of fecal pellets from 10-month-old Tg(Prox1-CreERT2); S1pr1f/f (tamoxifen from P1-7) mouse-2.
File: FS38995785.fastq
Description: Metagenomic analysis of fecal pellets from 10-month-old S1pr1f/f (tamoxifen from P1-7) mouse-1.
File: FS38995819.fastq
Description: Metagenomic analysis of fecal pellets from 10-month-old S1pr1f/f (tamoxifen from P1-7) mouse-2.
File: FS38995546.fastq
Description: Metagenomic analysis of fecal pellets from 10-month-old S1pr1f/f (tamoxifen from P1-7) mouse-3.
Code/software
The data was analyzed using One Codex cloud-based software that was provided to us by the company that sequenced our samples (Transnetyx, Memphis, TN, USA). More information about the analysis is available from the One Codex website (https://docs.onecodex.com/en/articles/3761205-one-codex-database).
