Data from: The effect of diversity on disease reverses from dilution to amplification in a 22-year biodiversity × N × CO2 experiment
Data files
May 08, 2025 version files 75.31 KB
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b.data.tseries.csv
867 B
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biocon.fungus.paths.streamline.2.R
34.43 KB
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biocon99-19-allplots.csv
35.94 KB
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l.data.tseries.csv
744 B
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README.md
3.32 KB
Abstract
Plant disease often increases with N, decreases with CO2, and increases as biodiversity is lost (i.e., the dilution effect). Additionally, all these factors can indirectly alter disease by changing host biomass and hence density-dependent disease transmission. Yet over long periods of time as communities undergo compositional changes, these biomass-mediated pathways might fade, intensify, or even reverse in direction. Using a field experiment that has manipulated N, CO2, and species richness for over 20 years, we compared the severity of a specialist rust fungus (Puccinia andropogonis) on its grass host (Andropogon gerardii) shortly after the experiment began (1999) and twenty years later (2019). Between these two sampling periods, two decades apart, we found that disease severity consistently increased with N and decreased with CO2. However, the relationship between diversity and disease reversed from a dilution effect in 1999 (more severe disease in monocultures) to an amplification effect in 2019 (more severe disease in mixtures). The best explanation for this reversal centered on host density (i.e., aboveground biomass), which was initially highest in monoculture, but became highest in mixtures two decades later. Thus, the diversity-disease pattern reversed, but disease consistently increased with host biomass. These results highlight the consistency of N and CO2 as drivers of plant disease in the Anthropocene and emphasize the critical role of host biomass, despite potentially variable effects of diversity, for relationships between biodiversity and disease.
Dataset DOI: 10.5061/dryad.rfj6q57n1
Description of the data and file structure
Data collected from the long-term BioCON experiment at Cedar Creek Ecosystem Reserve, MN, USA. All missing data represented as NA.
Files and variables
File: biocon.fungus.paths.streamline.2.R
Description: R script to run analyses and produce graphs
File: biocon99-19-allplots.csv
Description: plot-level variables from all plots of the BioCON experiment in both 1999 and 2019
Variables
- PYID: Plot-Year ID
- plot: plot number
- Year: year of data collection
- ring: the experiment has a nested design, distributed across 6 'rings'
- n: level of nitrogen (ambient [AN] or elevated [EN])
- co2: level of CO2 (ambient [AC] or elevated [EC])
- nsp: number of species planted in the plot
- water: if included in the TeRaCON experiment, whether water was manipulated
- temp: if included in the TeRaCON experiment, whether temperature was manipulated
- tera: was this plot included in the TeRaCON experiment?
- no.tera: was this plot NOT included in TeRaCON, or if it was, were water and temperature ambient levels?
- fung: percent leaf area of fungal damage, averaged among leaves observed in the plot
- fungz: standardized fung (mean=0, sd=1)
- ange.biomass: biomass (g/m2) of the host plant Andropogon gerardii in the plot
- simp.mass: Inverse Simpson's diversity index, calculated from biomass
- total.biomass: total plant biomass n the plot
- other.biomass: biomass of plants other than A. gerardii in the plot
- mass.legumes: biomass of legumes in the plot
- nmin: nitrogen mineralization rate (mg N/kg soil/day)
- nit: nitrification rate
- amo: ammonification rate
- moist: soil moisture
- light: percent light penetration
- simp.cov: Inverse Simpson's diversity using the cover subplot
- ange.cov: Percent cover of A. gerardii in the cover subplot
- real.rich: Realized richness (often a subset of planted richness, due to local extinctions)
File: b.data.tseries.csv
Description: mean biomass of Andropogen gerardii, averaged across levels of planted species richness (including both levels of N and CO2)
Variables
- Year: year of the experiment
- ange.bm.1: mean biomass in monocultures of A. gerardii
- ange.bm.16: mean biomass of A. gerardii in plots initially seeded with all 16 species
- ange.biomass.ratio: ratio of ange.bm.16 / ange.bm.1
File: l.data.tseries.csv
Description: mean percent light penetration, averaged across levels of planted species richness (including both levels of N and CO2)
Variables
- Year: year of the experiment
- light.1: mean light penetration in monocultures of A. gerardii
- light.16: mean light penetration in plots initially seeded with all 16 species
- light.ratio: ratio of light.16 / light.1
Code/software
All analyses were conducted in R.
Access information
Other publicly accessible locations of the data:
- email Alex Strauss (atstrauss15@gmail.com)
Data was derived from the following sources: