Data from: Bird extinctions shift bill-flower trait matching in Hawaiian lobelioids
Data files
Jul 13, 2026 version files 98.07 KB
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Case_FE_2026_Analysis_1.csv
89.10 KB
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Case_FE_2026_Analysis_2.csv
1.46 KB
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README.md
7.51 KB
Abstract
Species extinctions can reorganize ecological interactions by altering the distribution of functional traits within communities. These traits structure how species interact, influencing whether encounters result in mutualistic or antagonistic outcomes. However, the mechanisms linking species loss to changes in interaction outcomes remain poorly resolved, particularly in systems where direct observations of past interactions are unavailable.
We examined how recent avian extinctions in the Hawaiian Islands have shifted pairwise trait matching across all possible combinations of nectar-feeding birds and lobelioid plants with available flower length data. We then tested whether this trait-matching axis (bill length minus flower length) predicts pollination-relevant interaction outcomes.
We quantified pairwise trait matching across historical and contemporary bird assemblages on multiple islands and used permutation tests to assess shifts in trait-matching distributions within islands. We then tested whether trait matching predicts pollen contact and nectar robbing using generalized linear mixed-effects models based on observed bird–flower interactions.
Contemporary bird assemblages were shifted toward more negative trait-matching values across most islands, indicating shorter bills relative to floral length following the loss of long-billed nectarivores and a contraction of the trait space previously occupied by the avifauna.
Trait matching strongly predicted interaction outcomes. As bill-length approached flower length, the probability of pollen contact (i.e., contact with floral reproductive structures) increased, whereas the probability of nectar robbing decreased.
These results show that a simple morphological axis can predict consistent differences in bird–flower interaction outcomes across species pairs.
We show how extinction and subsequent shifts in bill–flower matching compress the distribution of trait-defined interactions and alter the balance of interaction outcomes, shifting ecological systems toward persistent but lower-quality interaction regimes.
Dataset DOI: 10.5061/dryad.sj3tx96kr
Description of the data and file structure
Two datasets supporting analyses of bird–flower trait matching in Hawaiian lobelioids. One file contains pairwise bird–plant combinations across islands and historical versus contemporary bird assemblages, including species identities and the trait values used to calculate pairwise bill–flower matching. The second file contains a compiled interaction dataset organized by study and bird–plant pair, including interaction counts, observed outcomes, and the corresponding trait-matching values used in analysis.
Files and variables
File: Case_FE_2026_Analysis_1.csv
Description: This file contains pairwise bird-plant combinations for Hawaiian lobelioids and bird assemblages by island and bird assemblage.
Variables
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bird_species: Scientific name of the bird species
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culmen: Exposed culmen length of the bird species, in millimeters
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island: Island code
K = Kauaʻi
O = Oʻahu
Mo = Molokaʻi
Ln = Lānaʻi
Ma = Maui
H = Hawaiʻi
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assemblage: historic = historical bird assemblage
contemporary = contemporary bird assemblage -
plant_species: Plant species identifier
BRIINS = Brighamia insignis
BRIROC = Brighamia rockii
CLEARB = Clermontia arborescens
CLECAL = Clermontia calophylla
CLECLE = Clermontia clermontioides
CLEDRE = Clermontia drepanomorpha
CLEFAU = Clermontia fauriei
CLEGRA = Clermontia grandiflora
CLEHAN = Clermontia hanaulaensis
CLEHAW = Clermontia hawaiiensis
CLEKAK = Clermontia kakeana
CLEKOH = Clermontia kohalae
CLELIN = Clermontia lindseyana
CLEMIC = Clermontia micrantha
CLEMON = Clermontia montis-loa
CLEMUL = Clermontia multiflora
CLEOBL = Clermontia oblongifolia
CLEPAL = Clermontia pallida
CLEPAR = Clermontia parviflora
CLEPEL = Clermontia peleana
CLEPER = Clermontia persicifolia
CLEPYR = Clermontia pyrularia
CLESAM = Clermontia samuelii
CLETUB = Clermontia tuberculata
CLEWAI = Clermontia waimeae
CYAACU-1 = Cyanea aculeatiflora
CYAACU-2 = Cyanea acuminata
CYAANG = Cyanea angustifolia
CYAARB = Cyanea arborea
CYAASA = Cyanea asarifolia
CYAASP = Cyanea asplenifolia
CYACAL = Cyanea calycina
CYACOM = Cyanea comata
CYACOP = Cyanea copelandii
CYACOR = Cyanea coriacea
CYACRI = Cyanea crispa
CYACYL = Cyanea cylindrocalyx
CYADOL = Cyanea dolichopoda
CYADUN = Cyanea dunbariae
CYADUV = Cyanea duvalliorum
CYAELE = Cyanea eleeleensis
CYAELL = Cyanea elliptica
CYAFIS = Cyanea fissa
CYAFLA = Cyanea floribunda
CYAGIF = Cyanea giffardii
CYAGLA = Cyanea glabra
CYAGRI = Cyanea grimesiana
CYAHAB = Cyanea habenata
CYAHAM = Cyanea hamatiflora
CYAHAR = Cyanea hardyi
CYAHEL = Cyanea heluensis
CYAHIR = Cyanea hirtella
CYAHOR = Cyanea horrida
CYAHUM = Cyanea humboldtiana
CYAKAH = Cyanea kahiliensis
CYAKAU = Cyanea kauaulaensis
CYAKOL = Cyanea kolekoleensis
CYAKON = Cyanea konahuanuiensis
CYAKOO = Cyanea koolauensis
CYAKUH = Cyanea kuhihewa
CYAKUN = Cyanea kunthiana
CYALAN = Cyanea lanceolata
CYALEP = Cyanea leptostegia
CYALIN = Cyanea linearifolia
CYALOB = Cyanea lobata
CYALON-1 = Cyanea longiflora
CYALON-2 = Cyanea longissima
CYAMAC-1 = Cyanea macrostegia
CYAMAG-2 = Cyanea magnicalyx
CYAMAN = Cyanea mannii
CYAMAR-1 = Cyanea maritae
CYAMAR-2 = Cyanea marksii
CYAMAU = Cyanea mauiensis
CYAMCE = Cyanea mceldowneyi
CYAMEM = Cyanea membranacea
CYAMIN = Cyanea minutiflora
CYAMUN = Cyanea munroi
CYAOBT = Cyanea obtusa
CYAPAR = Cyanea parvifolia
CYAPIL = Cyanea pilosa
CYAPIN = Cyanea pinnatifida
CYAPLA = Cyanea platyphylla
CYAPOH = Cyanea pohaku
CYAPRO-1 = Cyanea procera
CYAPRO-2 = Cyanea profuga
CYAPSE = Cyanea pseudofauriei
CYAPUR = Cyanea purpurellifolia
CYAPYC = Cyanea pycnocarpa
CYAQUE = Cyanea quercifolia
CYAREC = Cyanea recta
CYAREM = Cyanea remyi
CYARIV = Cyanea rivularis
CYASCA = Cyanea scabra
CYASES = Cyanea sessilifolia
CYASHI = Cyanea shipmanii
CYASOL-1 = Cyanea solanacea
CYASOL-2 = Cyanea solenocalyx
CYASPA = Cyanea spathulata
CYASTJ = Cyanea st.-johnii
CYASTI = Cyanea stictophylla
CYASUP = Cyanea superba
CYASYL = Cyanea sylvestris
CYATRI = Cyanea tritomantha
CYATRU = Cyanea truncata
CYAUND = Cyanea undulata
DELARG = Delissea argutidentata
DELFAL = Delissea fallax
DELFAU = Delissea fauriei
DELKAU = Delissea kauaiensis
DELLAC = Delissea laciniata
DELLAN = Delissea lanaiensis
DELLAU = Delissea lauliiana
DELNII = Delissea niihauensis
DELPAR = Delissea parviflora
DELRHY = Delissea rhytidosperma
DELSIN = Delissea sinuata
DELSUB = Delissea subcordata
DELTAK = Delissea takeuchii
DELUND = Delissea undulata
DELWAI = Delissea waianaeensis
LOBDUN = Lobelia dunbariae
LOBGAU = Lobelia gaudichaudii
LOBGLO = Lobelia gloria-montis
LOBGRA = Lobelia grayana
LOBHIL = Lobelia hillebrandii
LOBHYP = Lobelia hypoleuca
LOBKAU = Lobelia kauaiensis
LOBKOO = Lobelia koolauensis
LOBMON = Lobelia monostachya
LOBNII = Lobelia niihauensis
LOBOAH = Lobelia oahuensis
LOBREM = Lobelia remyi
LOBVIL = Lobelia villosa
LOBWAH = Lobelia wahiawa
LOBYUC = Lobelia yuccoides
TREAUR = Trematolobelia auriculata
TREGRA = Trematolobelia grandifolia
TREKAA = Trematolobelia kaalae
TREKAU = Trematolobelia kauaiensis
TREMAC = Trematolobelia macrostachys
TREROC = Trematolobelia rockii
TRESIN = Trematolobelia singularis
TREWIM = Trematolobelia wimmeri
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flower_length: Flower length assigned to the plant species, in millimeters
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bill_minus_flower: Difference between bird culmen length and flower length, in millimeters
File: Case_FE_2026_Analysis_2.csv
Description: This file contains bird-plant interaction outcome data compiled across studies.
Variables
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plant_species: Plant species identifier
CLEFAU = Clermontia fauriei
CLEKOH = Clermontia kohalae
CLELIN = Clermontia lindseyana
CLEPER = Clermontia persicifolia
CLEPYR = Clermontia pyrularia
CYALEP = Cyanea leptostegia
CYAGRI = Cyanea grimesiana
CYASHI = Cyanea shipmanii
CYASUP = Cyanea superba
DELWAI = Delissea waianaeensis
TREKAU = Trematolobelia kauaiensis
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bird_species: Bird species identifier
APAP = Himatione sanguinea
HIAM = Chlorodrepanis virens
IIWI = Drepanis coccinea
JAWE = Zosterops japonicus
KAAM = Chlorodrepanis stejnegeri
OAAM = Chlorodrepanis flava
RBLE = Leiothrix lutea
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N: Total number of observed interactions for that bird-plant pair in that study
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pollen_contact: Proportion of observed interactions resulting in pollen contact
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nectar_robbing: Proportion of observed interactions resulting in nectar robbing
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source: Study or data source
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culmen: Bird culmen length, in millimeters
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flower_length: Flower length, in millimeters
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bill_minus_flower: Difference between bird culmen length and flower length, in millimeters.
Code/software
All data files are provided in CSV format and can be opened with any standard spreadsheet or text-editing software. Analyses were conducted in R version 4.5.2. Packages used in the analysis workflow included glmmTMB and DHARMa. No custom software was required.
