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Data from: A neighborhood approach for using remotely sensed data to estimate current ranges for conservation assessments

Johnson, Bethany12; Pinilla-Buitrago, Gonzalo13; Anderson, Robert12

Published Jul 24, 2025 on Dryad. https://doi.org/10.5061/dryad.sxksn03ft

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Jul 24, 2025 version files 131.46 KB

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Abstract

Species distribution modeling can be used to predict environmental suitability, and removing areas currently lacking appropriate vegetation can refine range estimates for conservation assessments. However, the uncertainty around geographic coordinates can exceed the fine resolution of remotely sensed habitat data. Here, we present a novel methodological approach to reflect this reality by processing habitat data to maintain its fine resolution, but with new values characterizing a larger surrounding area (the “neighborhood”). We implement its use for a forest-dwelling species (Handleyomys chapmani) considered threatened by the IUCN. We determined deforestation tolerance threshold values by matching occurrence records with forest-cover data using two methods: 1) extracting the exact pixel value where a record fell; and 2) using the “neighborhood” value (more likely to characterize conditions within the radius of actual sampling). We removed regions below these thresholds from the climatic suitability prediction, identifying areas of inferred habitat loss. We calculated extent of occurrence (EOO) and area of occupancy (AOO), two metrics used by the IUCN for threat-level categorization. The values estimated here suggest removing the species from threatened categories. However, the results highlight spatial patterns of loss throughout the range not reflected in these metrics, illustrating drawbacks of EOO and showing how localized losses largely disappeared when resampling to the 2 km x 2 km grid required for AOO. The neighborhood approach can be applied to various abiotic data sources (NDVI, soils, marine, etc.) to calculate trends over time and should prove useful to many terrestrial and aquatic species. It is particularly useful for species having high coordinate uncertainty in regions of low spatial autocorrelation (whereby small georeferencing errors can lead to great differences in habitat, misguiding conservation assessments used in policy decisions). More generally, this study illustrates and enhances the practicality of using habitat-refined distribution maps for biogeography and conservation.