Data from: Foraging offsets declining fitness: Evidence of behavioral compensation for reproductive senescence
Data files
Mar 18, 2026 version files 243.21 KB
-
01_WinterForagingModel.R
4.81 KB
-
02_WinterForagingPlots.R
3.50 KB
-
03_SummerForagingModel.R
5 KB
-
04_SummerForagingPlots.R
4.75 KB
-
05_WinterFatModel.R
4.64 KB
-
06_WinterFatPlots.R
4.11 KB
-
07_SummerFatModel.R
4.70 KB
-
08_SummerFatPlots.R
4.69 KB
-
09_NewbornMassModel.R
5.36 KB
-
10_NewbornMassPlots.R
5.13 KB
-
11_SelectiveDisapModels.R
8.13 KB
-
GestAct_seasonal.rds
3.96 KB
-
GestDemog_seasonal.rds
4.09 KB
-
GestEnv_seasonal.rds
5.75 KB
-
README.md
7.03 KB
-
SummerAct_seasonal.rds
4.20 KB
-
SummerAct_wkly.rds
26.79 KB
-
SummerDemog_seasonal.rds
3.80 KB
-
SummerDemog_wkly.rds
2.87 KB
-
SummerEnv_seasonal.rds
7.37 KB
-
SummerEnv_wkly.rds
49.10 KB
-
SummerFawn_seasonal.rds
1.40 KB
-
SummerFawn_wkly.rds
8.62 KB
-
WinterAct_seasonal.rds
2.60 KB
-
WinterAct_wkly.rds
10.54 KB
-
WinterDemog_seasonal.rds
5.51 KB
-
WinterDemog_wkly.rds
4.36 KB
-
WinterEnv_seasonal.rds
5.01 KB
-
WinterEnv_wkly.rds
35.39 KB
Abstract
Animals face declining fitness contributions near the end of life, termed reproductive senescence. Though reproductive senescence frequently stems from energetic inefficiencies, animals making their final attempts at reproduction have the greatest incentive to succeed, raising the question of whether this deterioration is inevitable or if they can compensate to maximize fitness. Here, we disentangled two components of lifetime fitness —energy acquisition and allocation —and examined whether foraging effort serves as behavioral compensation for reproductive senescence in female mule deer (Odocoileus hemionus). For senescing animals, foraging effort positively influenced newborn size, providing evidence of compensation for declining fitness contributions. Moreover, we detected a likely diversion of resources away from survival and to reproduction. Facing their final opportunities to reproduce, animals adjusted their behavior to compensate for reproductive senescence but not to support survival. By evaluating the role of behavior in fitness, we reveal processes underlying senescence and its alleviation in wild populations.
Dataset DOI: 10.5061/dryad.sxksn03ht
Description of the data and file structure
Data and code for "Foraging offsets declining fitness: evidence of behavioral compensation for reproductive senescence."
Files and variables
File: GestAct_seasonal.rds
Description: Foraging effort for the final trimester of gestation
- AID - unique animal ID
- id_yr_seas - unique animal, year, and season
- foraging - proportion of time spent foraging (i.e., foraging effort)
File: GestDemog_seasonal.rds
Description: Demographic data for the final trimester of gestation
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- Age - age (years)
- Year - year
- MarchFat - ingesta-free body fat in spring (%)
- FetalNum - number of fetuses in spring (count)
- neo_mass - mass of newborn offspring (kg)
File: GestEnv_seasonal.rds
Description: Environmental data for the final trimester of gestation
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- daysfrompeakIRG - days from peak instantaneous rate of green up (averaged count)
- snow - snow depth (m)
File: SummerAct_seasonal.rds
Description: Foraging effort for summer (seasonal scale)
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- foraging - proportion of time spent foraging (i.e., foraging effort)
File: SummerAct_wkly.rds
Description: Foraging effort for summer (weekly scale)
- id_yr_seas_wk - unique animal ID, year, season, and week number of summer
- AID - unique animal ID
- id_yr_seas - unique animal, year, and season
- foraging - proportion of time spent foraging (i.e., foraging effort)
File: SummerDemog_seasonal.rds
Description: Demographic data for summer (seasonal scale)
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- Age - age (years)
- Year - year
- MarchFat - ingesta-free body fat in spring (%)
- fatchange - over summer change in ingesta-free body fat (percentage points)
- Preg - pregnancy status (pregnant = 1, not pregnant = 0)
File: SummerDemog_wkly.rds
Description: Demographic data for summer (weekly scale)
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- Age - age (years)
- Year - year
- MarchFat - ingesta-free body fat in spring (%)
- Preg - pregnancy status (pregnant = 1, not pregnant = 0)
File: SummerEnv_seasonal.rds
Description: Environmental data for summer (seasonal scale)
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- daysfrompeakIRG - days from peak instantaneous rate of green up (averaged count)
- dly_cprcp - cumulative daily precipitation (mm)
- Cover_PerennialForbsGrasses - cover of perennial forbs and grasses (%)
File: SummerFawn_seasonal.rds
Description: Offspring survival data for summer (seasonal scale)
- id_yr_seas - unique animal ID, year, and season
- fawnweeks - number of weeks supporting offspring over summer (count)
File: SummerEnv_wkly.rds
Description: Environmental data for summer (weekly scale)
- id_yr_seas_wk - unique animal ID, year, season, and week number of summer
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- dly_cprcp - cumulative daily precipitation (mm)
- Cover_PerennialForbsGrasses - cover of perennial forbs and grasses (%)
File: SummerFawn_wkly.rds
Description: Offspring survival data for summer (weekly scale)
- id_yr_seas - unique animal ID, year, and season
- id_yr_seas_wk - unique animal ID, year, season, and week number of summer
- NFawn - number of offspring alive in a given week of summer (count)
File: WinterAct_seasonal.rds
Description: Foraging effort for winter (seasonal scale)
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- foraging - proportion of time spent foraging (i.e., foraging effort)
File: WinterAct_wkly.rds
Description: Foraging effort for winter (weekly scale)
- id_yr_seas_wk - unique animal ID, year, season, and week number of summer
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- foraging - proportion of time spent foraging (i.e., foraging effort)
File: WinterDemog_wkly.rds
Description: Demographic data for winter (weekly scale)
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- Age - animal age (years)
- Year - year
- DecFat - ingesta-free body fat in autumn (%)
File: WinterDemog_seasonal.rds
Description: Demographic data for winter (seasonal scale)
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- Age - animal age (years)
- Year - year
- DecFat - ingesta-free body fat in autumn (%)
- fatchange - over winter change in ingesta-free body fat (percentage points)
- FetalNum - number of fetuses in spring (count)
File: WinterEnv_seasonal.rds
Description: Environmental data for winter (seasonal scale)
- AID - unique animal ID
- id_yr_seas - unique animal ID, year, and season
- cprcp - cumulative precipitation from the previous summer (mm)
- snow - snow depth (m)
File: WinterEnv_wkly.rds
Description: Environmental data for winter (weekly scale)
- id_yr_seas_wk - unique animal ID, year, season, and week number of summer
- AID - unique animal ID
- id_yr_seas- unique animal ID, year, and season
- cprcp - cumulative precipitation from the previous summer (mm)
- snow - snow depth (m)
Code/software
File: 01_WinterForagingModel.R
Description: Script for model of winter foraging effort.
File: 02_WinterForagingPlots.R
Description: Script to plot raw data and model of winter foraging effort.
File: 03_SummerForagingModel.R
Description: Script for model of summer foraging effort.
File: 04_SummerForagingPlots.R
Description: Script to plot raw data and model of summer foraging effort.
File: 05_WinterFatModel.R
Description: Script for model of over winter change in fat.
File: 06_WinterFatPlots.R
Description: Script to plot raw data and model of over winter change in fat.
File: 07_SummerFatModel.R
Description: Script for model of over summer change in fat.
File: 08_SummerFatPlots.R
Description: Script to plot raw data and model of over summer change in fat.
File: 09_NewbornMassModel.R
Description: Script for model of newborn mass.
File: 10_NewbornMassPlots.R
Description: Script to plot raw data and model of newborn mass.
File: 11_SelectiveDisapModels.R
Description: Script to assess selective disappearance.
Code/software
R is needed to view the RDS files and run R scripts.
