Imaging data for: Arp2/3 involvement in intercellular bridge membrane fluctuations and constriction during neural stem cell divisions
Data files
Mar 14, 2026 version files 34.47 GB
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1F_NSC1_time_1_min_per_frame.tif
295.07 MB
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1F_NSC2_time_1_min_per_frame.tif
326 MB
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1F_NSC3_time_1_min_per_frame.tif
758.87 MB
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1F_NSC4_time_1_min_per_frame.tif
168.40 MB
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1F_NSC5_time_1_min_per_frame.tif
146.63 MB
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2C_NSC1.tif
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2C_NSC2.tif
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2C_NSC3.tif
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2C_NSC4.tif
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2C_NSC5.tif
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2C_NSC6.tif
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2C_NSC7.tif
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2C_NSC8.tif
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2C_NSC9.tif
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2G_NSC1.tif
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2G_NSC10.tif
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2G_NSC2.tif
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2G_NSC3.tif
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2G_NSC4.tif
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2G_NSC5.tif
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2G_NSC6.tif
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2G_NSC7.tif
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2G_NSC8.tif
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2G_NSC9.tif
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6D_Arp66b_NSC1_time_20_sec_per_frame.tif
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6D_Arp66b_NSC2_time_20_sec_per_frame.tif
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6D_Arp66b_NSC3_time_20_sec_per_frame.tif
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6D_Arp66b_NSC4_time_20_sec_per_frame.tif
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6D_Arp66b_NSC5_time_10_sec_per_frame.tif
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6D_Arp66b_NSC6_time_10_sec_per_frame.tif
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6D_Diaphanous_NSC1_time_45_sec_per_frame.tif
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6D_Diaphanous_NSC2_time_45_sec_per_frame.tif
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6D_Diaphanous_NSC3_time_45_sec_per_frame.tif
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6D_Diaphanous_NSC4_time_45_sec_per_frame.tif
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6D_Diaphanous_NSC5_time_45_sec_per_frame.tif
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6D_Diaphanous_NSC6_time_2_min_per_frame.tif
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6D_Diaphanous_NSC7_time_2_min_per_frame.tif
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6D_Diaphanous_NSC8_time_1_min_per_frame.tif
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6D_Myosin_NSC1_time_20_sec_per_frame.tif
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6D_Myosin_NSC2_time_20_sec_per_frame.tif
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6D_Myosin_NSC3_time_20_sec_per_frame.tif
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6D_Myosin_NSC4_time_1_min_per_frame.tif
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6D_Myosin_NSC5_time_20_sec_per_frame.tif
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6D_Myosin_NSC6_time_1_min_per_frame.tif
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7C___7D_Arpc2-RNAi_NSC1_time_1_min_per_frame.tif
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7C___7D_Arpc2-RNAi_NSC2_time_1_min_per_frame.tif
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7C___7D_Arpc2-RNAi_NSC3_time_1_min_per_frame.tif
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7C___7D_Arpc2-RNAi_NSC4_time_1_min_per_frame.tif
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7C___7D_Arpc2-RNAi_NSC5_time_1_min_per_frame.tif
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7C___7D_Wild-Type_NSC1_time_1_min_per_frame.tif
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7C___7D_Wild-Type_NSC2_time_1_min_per_frame.tif
326 MB
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7C___7D_Wild-Type_NSC3_time_1_min_per_frame.tif
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7C___7D_Wild-Type_NSC4_time_1_min_per_frame.tif
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7C___7D_Wild-Type_NSC5_time_1_min_per_frame.tif
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7G__7H___7I_CK-666_NSC1_time_20_sec_per_frame.tif
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7G__7H___7I_CK-666_NSC2_time_20_sec_per_frame.tif
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7G__7H___7I_CK-666_NSC3_time_20_sec_per_frame.tif
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7G__7H___7I_CK-666_NSC4_time_20_sec_per_frame.tif
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7G__7H___7I_CK-666_NSC5_time_20_sec_per_frame.tif
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7G__7H___7I_DMSO_NSC1_time_1_min_per_frame.tif
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7G__7H___7I_DMSO_NSC2_time_1_min_per_frame.tif
1.42 GB
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7G__7H___7I_DMSO_NSC3_time_1_min_per_frame.tif
607.64 MB
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7G__7H___7I_DMSO_NSC4_time_1_min_per_frame.tif
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7G__7H___7I_DMSO_NSC5_time_1_min_per_frame.tif
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README.md
11.59 KB
Abstract
This dataset contains imaging data of Drosophila neural stem cells within larval brains, capturing cellular morphology and spatial organization. It accompanies the study “Arp2/3 involvement in intercellular bridge membrane fluctuations and constriction during neural stem cell divisions,” which investigates the mechanisms of intercellular bridge (ICB) remodeling during the final stages of neural stem cell division in the Drosophila larval brain. Unlike ICBs in cultured cells, which have flanking regions that thin as sibling cells move apart, neural stem cell ICBs lack flanking arms and constrict primarily at the midbody. Using super-resolution, full-volume live imaging, the study revealed dynamic plasma membrane fluctuations surrounding the ICB. Inhibition of the Arp2/3 complex, a key nucleator of branched actin filaments, reduced these fluctuations and impaired ICB thinning. These findings suggest that dynamic branched actin networks contribute to ICB membrane remodeling and help support constriction of the intercellular bridge during neural stem cell division. These data may be reused for image analysis, quantitative reanalysis, or methodological development. Users are expected to cite both this dataset and the associated publication in any use, presentation, or derivative work. While the data are publicly available, users are encouraged to contact the dataset authors for clarification, guidance, or collaboration.
Dataset DOI: 10.5061/dryad.tmpg4f5d1
Description of the data and file structure
Imaging data for Arp2/3 involvement in intercellular bridge membrane fluctuations and constrictions during neural stem cell divisions (https://doi.org/10.1101/2024.10.28.620743)
The deposited dataset consists of time-lapse microscopy image files in .tif format generated from live imaging experiments of Drosophila neural stem cells. These files can be opened and analyzed using standard bioimaging software such as Fiji (ImageJ) or Imaris.
The dataset includes multiple biological replicates for the experiments shown in the associated manuscript. Each .tif file represents an individual imaging experiment. File names correspond to specific figures or panels in the manuscript to facilitate direct mapping between the raw data and the published results. The temporal resolution of the imaging (time between frames) is included in the file name.
These data may be reused for image analysis, quantitative reanalysis, or methodological development. Users are expected to cite both this dataset and the associated publication in any use, presentation, or derivative work. While the data are publicly available, users are encouraged to contact the dataset authors for clarification, guidance, or collaboration.
Files and variables
File: 1F_NSC1_time_1_min_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP
File: 1F_NSC2_time_1_min_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP
File: 1F_NSC3_time_1_min_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP
File: 1F_NSC4_time_1_min_per_frame.tif
Description: Dividing neural cells expressing the membrane marker PLCδ-PH-GFP
File: 1F_NSC5_time_1_min_per_frame.tif
Description: Dividing neural scells expressing the membrane marker PLCδ-PH-GFP
File: 2C_NSC1.tif
Description: Dividing neural cells expressing the membrane marker PLCδ-PH-mCherry and Pavarotti (Pav)-GFP
File: 2C_NSC2.tif
Description: Dividing neural cells expressing the membrane marker PLCδ-PH-mCherry and Pavarotti (Pav)-GFP
File: 2C_NSC5.tif
Description: Dividing neuracellsem cell expressing the membrane marker PLCδ-PH-mCherry and Pavarotti (Pav)-GFP
File: 2C_NSC3.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-mCherry and Pavarotti (Pav)-GFP
File: 2C_NSC6.tif
Description: Dividing neucellsstem cell expressing the membrane marker PLCδ-PH-mCherry and Pavarotti (Pav)-GFP
File: 2C_NSC4.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-mCherry and Pavarotti (Pav)-GFP
File: 2C_NSC7.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-mCherry and Pavarotti (Pav)-GFP
File: 2C_NSC9.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-mCherry and Pavarotti (Pav)-GFP
File: 2C_NSC8.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-mCherry and Pavarotti (Pav)-GFP
File: 2G_NSC2.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-mCherry and Anillin (Ani)-GFP
File: 2G_NSC3.tif
Description: Dividing neural scelcellsressing the membrane marker PLCδ-PH-mCherry and Anillin (Ani)-GFP
File: 2G_NSC5.tif
Description: Dividing neural cells, labeling the membrane marker PLCδ-PH-mCherry and Anillin (Ani)-GFP
File: 2G_NSC1.tif
Description: Dividing neural cells expressing the membrane marker PLCδ-PH-mCherry and Anillin (Ani)-GFP
File: 2G_NSC7.tif
Description: Dividing neuracellsem cell expressing the membrane marker PLCδ-PH-mCherry and Anillin (Ani)-GFP
File: 2G_NSC9.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-mCherry and Anillin (Ani)-GFP
File: 2G_NSC8.tif
Description: Dividing neucneucells steml expressing the membrane marker PLCδ-PH-mCherry and Anillin (Ani)-GFP
File: 2G_NSC4.tif
Description: Dividing necells stem cell expressing the membrane marker PLCδ-PH-mCherry and Anillin (Ani)-GFP
File: 2G_NSC6.tif
Description: Dividing ncellsl stem cell expressing the membrane marker PLCδ-PH-mCherry and Anillin (Ani)-GFP
File: 2G_NSC10.tif
Description: Dividing cellsal stem cell expressing the membrane marker PLCδ-PH-mCherry and Anillin (Ani)-GFP
File: 6D_Diaphanous_NSC1_time_45_sec_per_frame.tif
Description: Dividing cells with a radial cell expressing the membrane marker PLCδ-PH-mCherry and Diaphanous-GFP
File: 6D_Arp66b_NSC1_time_20_sec_per_frame.tif
Description: Dividincellsural stem cell expressing the membrane marker PLCδ-PH-mCherry and Arp66b-GFP
File: 6D_Myosin_NSC1_time_20_sec_per_frame.tif
Description: Dividicellseural stem cell expressing the membrane marker PLCδ-PH-mCherry and Myosin-GFP
File: 6D_Myosin_NSC2_time_20_sec_per_frame.tif
Description: Dividcellsneural stem cell expressing the membrane marker PLCδ-PH-mCherry and Myosin-GFP
File: 6D_Diaphanous_NSC2_time_45_sec_per_frame.tif
Description: Divicells neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Diaphanous-GFP
File: 6D_Arp66b_NSC2_time_20_sec_per_frame.tif
Description: Divcellsg neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Arp66b-GFP
File: 6D_Myosin_NSC3_time_20_sec_per_frame.tif
Description: Dicellsng neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Myosin-GFP
File: 6D_Myosin_NSC4_time_1_min_per_frame.tif
Description: Dcellsing neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Myosin-GFP
File: 6D_Myosin_NSC5_time_20_sec_per_frame.tif
Description: cellsding neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Myosin-GFP
File: 6D_Myosin_NSC6_time_1_min_per_frame.tif
Description:cellsiding neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Myosin-GFP
File: 6D_Diaphanous_NSC3_time_45_sec_per_frame.tif
Description: cells providing neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Diaphanous-GFP
File: 7C___7D_Arpc2-RNAi_NSC1_time_1_min_per_frame.tif
Describing the stem cell expressing the membrane marker PLCδ-PH-GFP and Arpc2-RNAi
File: 7C___7D_Wild-Type_NSC1_time_1_min_per_frame.tif
DescripticellsDividing neural stem cell expressing the membrane marker PLCδ-PH-GFP
File: 6D_Arp66b_NSC3_time_20_sec_per_frame.tif
Descriptcells Dividing neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Arp66b-GFP
File: 6D_Diaphanous_NSC4_time_45_sec_per_frame.tif
Descript cellsiding neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Diaphanous-GFP
File: 6D_Diaphanous_NSC5_time_45_sec_per_frame.tif
Describing neural stem cells expressing the membrane marker PLCδ-PH-mCherry and Diaphanous-GFP
File: 6D_Diaphanous_NSC6_time_2_min_per_frame.tif
Descrcellson: Dividing neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Diaphanous-GFP
File: 6D_Diaphanous_NSC7_time_2_min_per_frame.tif
Desccellsion: Dividing neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Diaphanous-GFP
File: 6D_Diaphanous_NSC8_time_1_min_per_frame.tif
Decision: Dividing neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Diaphanous-GFP
File: 7G__7H___7I_DMSO_NSC1_time_1_min_per_frame.tif
Decellularization, providing neural stem cells expressing the membrane marker PLCδ-PH-GFP, and treated with DMSO
File: 7C___7D_Wild-Type_NSC2_time_1_min_per_frame.tif
DcelDescriptionviding neural stem cell cellsressing the membrane marker PLCδ-PH-GFP
File: 7C___7D_Arpc2-RNAi_NSC2_time_1_min_per_frame.tif
cellsription: Dividing neural stem cell expressing the membrane marker PLCδ-PH-GFP and Arpc2-RNAi
File: 7C___7D_Arpc2-RNAi_NSC3_time_1_min_per_frame.tif
Description: Dividing neural stem cells expressing membrane marker PLCδ-PH-GFP and Arpc2-RNAi
File: 7C___7D_Wild-Type_NSC3_time_1_min_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP
File: 6D_Arp66b_NSC4_time_20_sec_per_frame.tif
Description: Dividing neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Arp66b-GFPDividing neural stem cell expressing the membrane marker PLCδ-PH-mCherry and Arp66b-GFP
File: 7C___7D_Wild-Type_NSC4_time_1_min_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP
File: 7C___7D_Wild-Type_NSC5_time_1_min_per_frame.tif
Description: Dividing neural cells expressing the membrane marker PLCδ-PH-GFP
File: 7C___7D_Arpc2-RNAi_NSC4_time_1_min_per_frame.tif
Description: Dividing neural scelcellsressing the membrane marker PLCδ-PH-GFP and Arpc2-RNAi
File: 6D_Arp66b_NSC5_time_10_sec_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-mCherry and Arp66b-GFP
File: 7G__7H___7I_DMSO_NSC2_time_1_min_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP and treated with DMSO
File: 7C___7D_Arpc2-RNAi_NSC5_time_1_min_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP and Arpc2-RNAi
File: 6D_Arp66b_NSC6_time_10_sec_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-mCherry and Arp66b-GFP
File: 7G__7H___7I_DMSO_NSC3_time_1_min_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP and treated with DMSO
File: 7G__7H___7I_DMSO_NSC4_time_1_min_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP and treated with DMSO
File: 7G__7H___7I_CK-666_NSC1_time_20_sec_per_frame.tif
Description: Dividing neural scelcellsressing the membrane marker PLCδ-PH-GFP and treated with CK-666
File: 7G__7H___7I_DMSO_NSC5_time_1_min_per_frame.tif
Description: Dividing neural cells, labeling the membrane marker PLCδ-PH-GFP, and treating with DMSO
File: 7G__7H___7I_CK-666_NSC5_time_20_sec_per_frame.tif
Description: Dividing neural cells expressing the membrane marker PLCδ-PH-GFP and treated with CK-666
File: 7G__7H___7I_CK-666_NSC2_time_20_sec_per_frame.tif
Description: Dividing neuracellsem cell expressing the membrane marker PLCδ-PH-GFP and treated with CK-666
File: 7G__7H___7I_CK-666_NSC3_time_20_sec_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP and treated with CK-666
File: 7G__7H___7I_CK-666_NSC4_time_20_sec_per_frame.tif
Description: Dividing neural stem cells expressing the membrane marker PLCδ-PH-GFP and treated with CK-666
Code/software
Images were analyzed using FIJI
Drosophila melanogaster was used as the experimental model organism in this study. All fly strains used are listed in the Key Resources Table of the associated publication. Third instar larvae of mixed sex were used for all experiments. Since dividing neural stem cells (NSCs) in the larval brain were the focus, larvae were selected at the wandering third instar stage to ensure active neuroblast proliferation. No sex-specific effects were analyzed, and sex-specific differences in NSC behavior have not been systematically assessed.
Flies were maintained on standard Bloomington recipe food at 25°C under a 12-hour light/dark cycle. For experiments involving UAS/GAL4-driven transgene expression, crosses were performed at 29°C to enhance GAL4 activity. A Worniu-GAL4 driver line was used to direct tissue-specific expression of UAS-controlled transgenes specifically in NSCs. Stocks were obtained from the Bloomington Drosophila Stock Center or from the laboratories indicated in the Key Resources Table of the associated publication. No institutional animal protocol approval was required for Drosophila research at the University of Oregon, as invertebrate research is exempt from IACUC oversight under current institutional and federal guidelines.
For live imaging, the following fluorescently tagged transgenes were used:
- Membrane dynamics: UAS-GAL4 driven PLCδ-PH-GFP, PLCδ-PH-mCherry, GRP1-PH-GFP, and Farnesyl-GFP
- Glial cells: Nervana 2 (Nrv2)-GFP
- F-actin: UAS-GAL4 driven Lifeact-mRuby and GMA-GFP
- Microtubules: UAS-GAL4 driven Jupiter-mCherry
- Anillin: UAS-GAL4 driven Anillin-GFP
- Arp2/3: UAS-Arp3-GFP
- Centralspindlin: GFP-tagged Pavarotti (Pav) under control of ubiquitin regulatory sequences
- Formin Diaphanous: UAS-GAL4 driven Diaphanous-GFP
- SCAR/WAVE complex: Sra1/Cyfip endogenously tagged with eGFP using CRISPR/Cas9
- Myosin II: GFP-tagged Spaghetti squash (regulatory light chain of non-muscle Myosin II) expressed from its endogenous promoter
To knock down the Arpc2 subunit of the Arp2/3 complex in NSCs, Worniu-GAL4 was used to drive expression of Arpc2-RNAi.
Third instar Drosophila larval brains were dissected in Schneider’s Insect Medium to isolate the central nervous system and mounted on poly-D-lysine–coated glass-bottom dishes in modified HL3.1 solution. Live imaging was performed using spinning disk confocal microscopes with SoRa optics to achieve super-resolution imaging. Most experiments were conducted on a Nikon Eclipse Ti-2 Yokogawa CSU-W1 SoRa system with dual Photometrics Prime BSI sCMOS cameras and a 60× water-immersion objective (NA 1.2), while a subset of images (Fig. 3C and part of Video S3) were acquired on an Olympus IX-83 Yokogawa CSU-W1 SoRa system with dual Hamamatsu ORCA-Fusion BT cameras and a 60× silicone objective (NA 1.3). GFP-tagged proteins were excited with 488 nm light, and mCherry/mRuby-tagged proteins with 561 nm light.
Neural stem cells (NSCs) were identified by size, location within the CNS, and expression of NSC-specific fluorescent markers. Time-lapse imaging of cleavage furrow and intercellular bridge (ICB) dynamics was performed by refocusing on the medial plane of the structure along the apical–basal axis before each frame. Three-dimensional reconstructions of the ICB were generated from optical sections spanning the entire structure with 300 nm z-steps.
Pharmacological perturbations were performed using 50 µM Latrunculin A to inhibit F-actin and 2 mM CK-666 to inhibit the Arp2/3 complex, both dissolved in DMSO, with equivalent DMSO treatments used as vehicle controls.
