Investigators
David S. Mason
The Jones Center at Ichauway
Kevin M. Robertson
Tall Timbers Research Station
Phillip G. Hahn
Entomology and Nematology Department
University of Florida
Emilio M. Bruna
Wildlife Ecology and Conservation
University of Florida
John L. Willis
Southern Research Station
USDA Forest Service
Marcus A. Lashley
Wildlife Ecology and Conservation
University of Florida
Sampling information
The experiments and sampling occurred between 2020–2022 at Tall Timbers Research Station in Tallahassee, Florida. USA.
Sharing and Accessing Information
Please contact the primary author (david.mason@jonesctr.org) for advice or further context.
Methodology
README: Data from: Fire enables passive directed dispersal by birds
Description of data and file structure
This data comprises ten spreadsheets related to passive directed dispersal by birds after fire across two distinct experimental frameworks. The first subset of data (1–3) characterizes vegetation and fruit production within a long-term fire-frequency experiment. The second subset (4–10) focuses on bird-mediated seed dispersal at artificial perches above seed traps in a second experiment embedded within a frequent-fire landscape. Some gaps exist due to environmental and technical constraints, including severe weather and intermittent game camera malfunctions. These brief periods of missing data are denoted as NA within the spreadsheets.
Clean data files
| File name |
Description |
| Long-term-veg-focal-trials.csv |
Presence/absence for focal taxa on vegetation transects experiment 1(long-term fire frequency / fire exclusion) |
| Long-term-veg-focal-counts.csv |
Counts for focal taxa on vegetation transectsexperiment 1(long-term fire frequency / fire exclusion) |
| Fruit-availability-survey.csv |
Fruit counts for focal taxa in experiment 1(long-term fire frequency / fire exclusion) |
| 1_Birds-annual.csv |
Annual counts of seed-dispersing birds on artificial perches. Data from game cameras in experiment 2 (magnet effect) |
| 3_Birds-scat.csv |
Binomial detection of defecation events on artificial perches for individual observations of seed-dispersing birds. Data from game cameras in experiment 2 (magnet effect) |
| 4_Perch-availability.csv |
Distance, species, and foliage status of three nearest lower midstory perches |
| 3_TT-seed-removal.csv |
Results of seed addition trials at seed traps |
| 4_TT-fruit-survey.csv |
1 m fruit transects for presence/absence of focal taxa at seed traps |
| 10_TT-seeds-species-annual.csv |
Raw and adjusted annual seed totals for each species at each trap |
Data specific information for:
| Long-term-veg-focal-trials.csv |
| Variable |
Values |
Units |
Explanation |
| PLOT |
DRAINAGE, NB66, UNBURN, W2A, W2B, W2C, W75 |
Categorical |
Locations of plant surveys (n = 7) |
| TREATMENT |
CONTROL, FIRE |
Categorical |
Sites burned biennially or remain fire-excluded (~60 years of no fire) |
| TRANSECT |
DRAINAGE.1, DRAINAGE.2, DRAINAGE.3, NB66.1, NB66.2, NB66.3, NB66.4, Unburned.1, Unburned.2, Unburned.3, Unburned.4, Unburned.5, Unburned.6, W2A.1, W2A.2, W2A.3, W2A.4, W2A.5, W2A.6, W2B.1, W2B.2, W2B.3, W2B.4, W2B.5, W2B.6, W2C.1, W2C.2, W2C.3, W2C.4, W2C.5, W2C.6, W75.1, W75.2, W75.3 |
Categorical |
Individual 30 m transects (1 m intercept) inside each location (n = 33) |
| SPECIES |
CAAM2, RHCO, RUBUS |
Categorical |
Focal species: CAAM2 = Callicarpa americana, RHCO = Rhus copallinum, and RUBUS = Rubus sp. |
| SUCCESS |
0–8 |
Integer |
Number of plants that are focal taxa |
| FAILURE |
0–57 |
Integer |
Number of plants that are not focal taxa |
| TOTAL |
0–57 |
Integer |
Total number of plants in transect |
Data specific information for:
| Long-term-veg-focal-counts.csv |
| Variable |
Values |
Units |
Explanation |
| PLOT |
DRAINAGE, NB66, UNBURN, W2A, W2B, W2C, W75 |
Categorical |
Locations of plant surveys (n = 7) |
| TREATMENT |
CONTROL, FIRE |
Categorical |
Sites burned biennially or remain fire-excluded (~60 years of no fire) |
| TRANSECT |
DRAINAGE.1, DRAINAGE.2, DRAINAGE.3, NB66.1, NB66.2, NB66.3, NB66.4, Unburned.1, Unburned.2, Unburned.3, Unburned.4, Unburned.5, Unburned.6, W2A.1, W2A.2, W2A.3, W2A.4, W2A.5, W2A.6, W2B.1, W2B.2, W2B.3, W2B.4, W2B.5, W2B.6, W2C.1, W2C.2, W2C.3, W2C.4, W2C.5, W2C.6, W75.1, W75.2, W75.3 |
Categorical |
Individual 30 m transects (1 m intercept) inside each location (n = 33) |
| SPECIES |
CAAM2, RHCO, RUBUS |
Categorical |
Focal species: CAAM2 = Callicarpa americana, RHCO = Rhus copallinum, and RUBUS = Rubus sp. |
| DETECTIONS |
0–8 |
Integer |
Total number of focal taxa detections in transect |
Data specific information for:
| Fruit-availability-survey.csv |
| Variable |
Values |
Units |
Explanation |
| DATE |
10/4/2022–7/3/2024 |
Month/Day/Year |
|
| PLOT |
DRAINAGE, NB66, UNBURN, W2A, W2B, W2C, W75 |
|
Locations of fruit surveys (n = 7) |
| TREATMENT |
CONTROL, FIRE |
Categorical |
Sites burned biennially or remain fire-excluded (~60 years of no fire) |
| SPECIES |
CAAM2, RHCO, RUBUS |
Categorical |
Focal species: CAAM2 = Callicarpa americana, RHCO = Rhus copallinum, and RUBUS = Rubus sp. |
| FRUIT |
0–1,376 |
Integer |
# of fruit on individual plant |
| NOTE |
|
|
Used to cross-reference site names |
Data specific information for:
| Variable |
Values |
Units |
Explanation |
| SITE |
1, 4, 6, 7, 8, 17 |
Categorical |
Sites consisting of paired plots (n = 6) |
| BURN.YR |
B,C |
Categorical |
Identifies plots within sites by which year they were burned. B = first year, C = second year |
| TRAP |
A, B, C |
Categorical |
Identifier for traps within paired plots (n = 3 per plot, n = 6 per site) |
| BURN |
Y, N |
Categorical |
Y is < 1 year since fire, N is 1-2 years since fire |
| DETECTIONS |
4–495 |
Integer |
Number of annual bird observations at individual trap |
Data specific information for:
| Variable |
Values |
Units |
Explanation |
| SITE |
1, 4, 6, 7, 8, 17 |
Categorical |
Sites consisting of paired plots (n = 6) |
| BURN.YR |
B,C |
Categorical |
Identifies plots within sites by which year they were burned. B = first year, C = second year |
| TRAP |
A, B, C |
Categorical |
Identifier for traps within paired plots (n = 3 per plot, n = 6 per site) |
| BURN |
Y, N |
Binary |
Y is < 1 year since fire, N is 1-2 years since fire |
| DATE.TIME |
4/15/20 17:18– 3/24/22 11:20 |
Month/Day/Year HH:MM |
Date and time of bird observation |
| DATE |
4/15/20–3/24/22 |
Month/Day/Year |
Date of bird observation |
| SPECIES |
American crow, American goldfinch, American robin, Bachman's sparrow, Blue jay, Blue-gray gnatcatcher, Brown thrasher, Brown-headed cowbird, Brown-headed nuthatch, Carolina chickadee, Carolina wren, Chipping sparrow, Common yellowthroat, Downy woodpecker, Eastern bluebird, Eastern kingbird, Eastern phoebe, Eastern towhee, Eastern wood-pewee, Grackle, Gray catbird, Great crested flycatcher, Hairy woodpecker, House finch, House wren, Indigo bunting, Mourning dove, Northern bobwhite, Northern cardinal, Northern flicker, Northern mockingbird, Orchard oriole, Passerellidae sparrow sp., Red-bellied woodpecker, Red-eyed vireo, Red-headed woodpecker, Red-winged blackbird, Rose-breasted grosbeak, Setophaga sp., Summer tanager, Tufted titmouse, Unknown finch, Unknown passerine, Unknown songbird, Unknown sparrow, Unknown thrush, Unknown woodpecker, Unknown wren, White-crowned sparrow, Yellow-billed cuckoo, Yellow-breasted chat, Yellow-throated vireo |
Categorical |
Taxon of bird observation |
| SCAT |
0/1 |
Binary |
Indicates whether a defecation event is observed for the bird |
Data specific information for:
| Variable |
Values |
Units |
Explanation |
| DATE |
9/5/21–2/20/22 |
Month/Day/Year |
Date of sample |
| SITE |
1, 4, 6, 7, 8, 17 |
Categorical |
Sites consisting of paired plots (n = 6) |
| BURN.YEAR |
B, C |
Categorical |
Identifies plots within sites by which year they were burned. B = first year, C = second year |
| TRAP |
A, B, C |
Categorical |
Identifier for traps within paired plots (n = 3 per plot, n = 6 per site) |
| DISTANCE |
0.89–10.22 |
Meters |
Distance between seed trap and nearest artificial perch (n = 3 per trap) |
| SPECIES |
CAAM, CACO, LIST, MYCE, PINUS, PRSE, QUERCUS, RHUS, UNKNOWN |
Categorical |
Taxon of measured perch (CAAM = Callicarpa americana, CACO = Carya cordiformis, LIST = Liquidambar styraciflua, MYCE = Myrica cerifera, PINUS = Pinus spp., PRSE = Prunus serotina, QUERCUS = Quercus spp., RHUS, = Rhus copallinum, UNKNOWN = unidentified species) |
| FOLIAGE |
Y, N |
Binary |
Does the perch have foliage? |
| NOTES |
|
|
Includes additional details on foliage, taxon, and NA status |
Data specific information for:
| Variable |
Values |
Units |
Explanation |
| TRIAL |
1–6 |
Categorical |
Individual seed removal trials (sequential) |
| START.DATE |
4/6/20–7/5/20 |
Month/Day/Year |
Trial start date |
| END.DATE |
5/4/20–7/26/20 |
Month/Day/Year |
Trial end date |
| SITE |
1, 4, 6, 7, 8, 17 |
Categorical |
Sites consisting of paired plots (n = 6) |
| BURN.YR |
B, C |
Categorical |
Identifies plots within sites by which year they were burned. B = first year, C = second year |
| TRAP |
A, B, C |
Categorical |
Identifier for traps within paired plots (n = 3 per plot, n = 6 per site) |
| SPECIES |
SIAL, HEAN, CAAN |
Categorical |
Species of seeds in trial (SIAL = Sinapsis alba, HEAN = Helianthus annuus, CAAN = Capsicum annuum) |
| START.SEEDS |
10 |
Integer |
Number of seeds for each species at the start of the trial |
| END.SEEDS |
0–10 |
Integer |
Number of seeds for each species at the end of the trial |
| NOTES |
|
|
Additional notes on individual trials |
| SEEDS.RM |
0–10 |
Integer |
Number of seeds for each species lost during the trial |
| INTERVAL |
2020-04-06—2020-05-04 / 2020-07-05—2020-07-26 |
Interval |
Date range for each trial |
| TRIAL.LENGTH |
6–28 |
Integer |
Duration of each trial (days) |
| SEEDS.RM.RATE |
0–1.33 |
Decimal |
Seeds lost per day |
| SEEDS.RM.PROP |
0.0–1.0 |
Decimal |
Proportion of seeds lost |
Data specific information for:
| Variable |
Values |
Units |
Explanation |
| DATE |
6/13/20–2/20/22 |
Month/Day/Year |
Date of sample |
| SITE |
1, 4, 6, 7, 8, 17 |
Categorical |
Sites consisting of paired plots (n = 6) |
| BURN.YR |
B, C |
Categorical |
B is < 1 year since fire, C is 1-2 years since fire |
| TRAP |
A, B, C |
Categorical |
Identifier for traps within paired plots (n = 3 per plot, n = 6 per site) |
| DIRECTION |
N, SE, SW |
Categorical |
Cardinal or subcardinal direction of fruit transect |
| DISTANCE |
3–33 |
Integer |
Meters from trap along the transect (1 m point intercept) |
| SPECIES |
CAAM2, RHCO, RUBUS |
Categorical |
Focal taxa (CAAM2 = Callicarpa americana, RHUS = Rhus copallinum, RUBUS = Rubus sp.) |
| PLANT |
0, 1 |
Binary |
Was focal plant present at transect point? |
| FRUIT |
0, 1 |
Binary |
Was focal plant fruiting at transect point? |
Data specific information for:
| 10_TT-seeds-species-annual.csv |
| Variable |
Values |
Units |
Explanation |
| SITE |
1, 4, 6, 7, 8, 17 |
Categorical |
Sites consisting of paired plots (n = 6) |
| BURN.YR |
B, C |
Categorical |
B is < 1 year since fire, C is 1-2 years since fire |
| TRAP |
A, B, C |
Categorical |
Identifier for traps within paired plots (n = 3 per plot, n = 6 per site) |
| ID |
1BA, 1BB, 1BC, 1CA, 1CB, 1CC, 4BA, 4BB, 4BC, 4CA, 4CB, 4CC, 6BA, 6BB, 6BC, 6CA, 6CB, 6CC, 7BA, 7BB, 7BC, 7CA, 7CB, 7CC, 8BA, 8BB, 8BC, 8CA, 8CB, 8CC, 17BA, 17BB, 17BC, 17CA, 17CB, 17CC |
Categorical |
Unique identifier for individual traps (n = 36) |
| UNIT |
A, B, C, D, E, F, G, H, I, J, K, L |
Categorical |
Unique identifier for individual plots (n = 36) |
| BURN |
Y/N |
Binary |
Y is < 1 year since fire, N is 1-2 years since fire |
| SPECIES |
CAAM2, RHUS, RUBUS |
Integer |
Focal taxa (CAAM2 = Callicarpa americana, RHUS = Rhus copallinum, RUBUS = Rubus sp.) |
| RAW.SEEDS |
0–1,090 |
Integer |
Annual seed rain in individual traps for taxa |
| ADJ.RM |
0–4,165 |
Integer |
Annual seed rain in individual traps for taxa after adjusting for seed loss |
| ADJ.FRUIT |
0–135,448 |
Integer |
Annual seed rain in individual traps for taxa after adjusting for fruit availability |
| ADJ.SEEDS |
0–517,412 |
Integer |
Annual seed rain in individual traps for taxa after adjusting for seed loss and fruit availability |