Environmentally-associated color divergence does not coincide with population structure across Lesser Antillean anoles
Data files
May 02, 2025 version files 12.19 KB
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Anolis-lividus_MC1R_163bp.fasta
10.17 KB
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README.md
2.02 KB
Abstract
Species distributed across heterogeneous environments may undergo local adaptation, which can be limited by the homogenizing effects of gene flow. Lesser Antillean anoles exhibit dorsal color variation associated with dramatic shifts in environment across small spatial scales, providing an excellent system for studying the maintenance of local adaptation despite ongoing gene flow. The 1995 Soufriere Hills eruption on Montserrat provides an opportunity to understand how natural disasters may influence evolution of insular species. Thus, our study had two main objectives. First, we collected genetic, phenotypic, and environmental data to investigate whether environmentally-associated dorsal coloration reflects underlying population structure in three species of Lesser Antillean anoles. Second, we examined the short-term evolutionary consequences of volcanism by comparing pre- and post-eruption samples of Anolis lividus using multi-locus sequence data. We found all three species exhibited genetic isolation- by-distance but not isolation-by-environment. Furthermore, phenotypic differences within each species were not predicted by genetic distances, suggesting gene flow across color morphs. We confirmed the repopulation of A. lividus in the impacted area and found genetic diversity equivalent to pre-eruption sampling. Our findings contribute to our understanding of local adaptation in spatially small-scale systems and the impact of catastrophic natural disasters on population structure.
Access this dataset on Dryad: https://doi.org/10.5061/dryad.xksn02vq0
Submitted here is a datafile containing the unphased DNA sequence of a nuclear gene (MC1R) in FASTA format. Sequences were generated by Sanger sequencing. These sequences are provided here because they do not meet the minimum length required for accession in Genbank. These data were used in analyses described in the article "Environmentally-associated color divergence does not coincide with population structure across Lesser Antillean anoles." In this study we examined the relationship between genetic population structure and habitat associated phenotypic differences in Lesser Antillean anoles. Specifically, MC1R data is derived from Anolis lividus from the island of Montserrat.
Description of the data and file structure
Data is provided in standard FASTA format. The datafile contains sequence data from 59 individuals of Anolis lividus for the nuclear gene MC1R. Data are aligned and unphased. All sequences are 163 base pairs in length.
Anolis-lividus_MC1R_163bp.fasta
File Details:
- Name: Anolis-lividus_MC1R_163bp.fasta
- Format: FASTA
File Data Description:
In FASTA format individual sequences begin with ">" followed by the name of the sequences. Here, sequences are named by field collection ID (collector initials followed by numeric identifier) or by the specimen accession number if derived from a natural history museum's tissue collection. The sequence name is followed by a line break and then sequence data in a single line. Sequence data is represented using IUPAC ambiguity codes. This data file is compatible with a wide variety of analytical software that accepts FASTA formatted files.
Sharing/Access information
All other sequence data are available on Genbank under the following accession numbers: PP195265–PP195577.
- Jung, Catherine; Frederick, Jeffrey H; Graham, Natalie R et al. (2024). Environmentally associated colour divergence does not coincide with population structure across Lesser Antillean anoles. Biological Journal of the Linnean Society. https://doi.org/10.1093/biolinnean/blae047
