Clarifying the phylogenetic placement of the Eupoinae Maddison, 2015 with ultra-conserved element data (Araneae, Salticidae)
Data files
Oct 11, 2024 version files 1.49 GB
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1_70spp_3267loci.mafft.zip
92.93 MB
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2_70spp_proofed.2685loci.zip
9.28 MB
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3_70spp_2685loci_ML.zip
18.76 MB
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4_70spp_2685loci_genetrees.zip
1.37 GB
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5_4_70spp_2685loci_ASTRAL.zip
76.27 KB
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README.md
1.03 KB
Abstract
The subfamily Eupoinae Maddison, 2015 is an enigmatic group of minute leaf-litter dwelling jumping spiders from Southeast Asia. Although previous molecular phylogenetic studies have suggested that it is one of the basal (non-salticine) lineages within jumping spiders, its exact placement remains unclear. In this study, ultra-conserved element data were collected from major salticid lineages to investigate the phylogenetic relationships of all salticid subfamilies, with a special focus on the placement of the Eupoinae. The results provide a well-supported phylogeny for jumping spider subfamilies, and suggest a sister relationship of Eupoinae with Spartaeinae Wanless, 1984, a basal lineage of jumping spiders with relatively high diversity of species, morphology, and behaviour diversity. With the placement of the Eupoinae, we have resolved the relationships of all salticid subfamilies, supplying a robust framework for evolutionary studies of jumping spiders.
https://doi.org/10.5061/dryad.z08kprrph
Description of the data and file structure
Clarifying the phylogenetic placement of the Eupoinae Maddison, 2015 with ultra-conserved element data (Araneae, Salticidae)
Description of the data and file structure
1_70spp_3267loci.mafft.zip: contains all the alignments for the UCE loci
2_70spp_proofed.2685loci.zip: contains the 2685 trimmed and proof-checked UCE loci (alignments) for the final phylogenetic analyses
3_70spp_2685loci_ML.zip: contains the final concatenated UCE dataset with 2685 loci for the phylogenetic analyses, the partition file for the concatenated 2685-UCE dataset, and the resulted ML tree
4_70spp_2685loci_genetrees.zip: contains the genetree and ufboots trees from each UCE locus for the ASTRAL analyses
5_4_70spp_2685loci_ASTRAL.zip: contains the results from the ASTRAL analyses