Data from: Invasive fish reshape biodiversity patterns in China’s freshwater lakes
Data files
May 14, 2025 version files 76.27 KB
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Fasta_S1.nwk
16.34 KB
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README.md
5.81 KB
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Table_S1.csv
37.76 KB
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Table_S2.xlsx
16.36 KB
Abstract
Globalization has dramatically accelerated the spread of non-native species, intensifying threats to freshwater ecosystems. While China ranks among the most heavily invaded countries, the role of non-native species as key drivers of biodiversity changes is often overlooked in research on anthropogenic impacts. This oversight hampers the development of effective conservation and management strategies by limiting a full understanding of what shapes biodiversity patterns. To bridge this gap, an extensive dataset from 131 lakes across China was compiled and analyzed using a novel composite diversity index that integrates species richness with functional and phylogenetic uniqueness, allowing for a more precise identification of fish multidimensional diversity hotspots. Additionally, gradient forest models were employed to elucidate the impacts of non-native species, geography, climate, and physicochemical factors on these patterns. Our findings revealed significant taxonomic and functional homogenization in non-native hotspots within the overall fish community, coupled with phylogenetic diversification. Notably, non-native fish diversity emerged as the primary factor shaping overall and native fish multidimensional diversity patterns. While the establishment of non-native species may provide an immediate enhancement to overall diversity, it often leads to the extirpation/extinction of native species, ultimately resulting in biodiversity loss at local and potentially the regional scale. This study highlights the importance of examining multiple dimensions to characterise the intricate dynamics between native and non-native species, which is essential for understanding their true impact on biodiversity and for achieving global conservation goals.
GENERAL INFORMATION
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Title of Dataset: Invasive fish reshape biodiversity patterns in China's freshwater lakes
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Author Information
A. Principal Investigator Contact Information
Name: Zhice Liang
Institution: Institute of Hydrobiology
Address: Wuhan, China
Email: liangzhice@ihb.ac.cnB. Associate or Co-investigator Contact Information
Name: Chuanbo Guo
Institution: Institute of Hydrobiology
Address: Wuhan, China
Email: guocb@ihb.ac.cn -
Date of data collection (single date, range, approximate date): Post-2000 and pre-1990 periods.
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Geographic location of data collection: 131 major lakes in China
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Information about funding sources that supported the collection of the data: National Natural Science Foundation of China: NO. 32172980; National Key Research and Development Program of China: No. 2023YFD2400900; the earmarked fund for China Agriculture Research System: CARS-45; China Scholarship Council: No. 202304910486
SHARING/ACCESS INFORMATION
- Licenses/restrictions placed on the data: CC0 1.0 Universal (CC0 1.0) Public Domain
- Links to publications that cite or use the data: Liang, Z. C., Jackson, D. A., et al. (2025). Invasive fish reshape biodiversity patterns in China's freshwater lakes.
- Links to other publicly accessible locations of the data: None
- Links/relationships to ancillary data sets: None
- Was data derived from another source? No
If yes, list source(s): NA - Recommended citation for this dataset:
Liang, Z. C., Jackson, D. A., et al. (2025). Data from: Invasive fish reshape biodiversity patterns in China's freshwater lakes. Dryad Digital Repository. DOI: 10.5061/dryad.280gb5n1x
DATA & FILE OVERVIEW
- File List:
A) Table S1: Functional traits for each identified fish species in the post-2000 period
B) Table S2: The results of overall fish taxonomic β-diversity (β_OA_TD), functional β-diversity (β_OA_FD), and phylogenetic β-diversity (β_OA_PD) in the 12 non-native fish diversity hotspots during historical and current periods
C) Fasta S1: Comparative sequences of the mitochondrial COⅠ gene (cytochrome c oxidase subunitⅠ) for each identified fish species in the post-2000 period
- Relationship between files, if important: None
- Additional related data collected that was not included in the current data package: None
- Are there multiple versions of the dataset? No
A. If yes, name of file(s) that was updated: NA
i. Why was the file updated? NA
ii. When was the file updated? NA
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DATA-SPECIFIC INFORMATION FOR: Table S1: Functional traits for each identified fish species in the post-2000 period
- Number of variables: 16
- Number of cases/rows: 318
- Variable List:
- Fish species
- Max length (Maximum standard length that can be achieved during lifecycle, continuous variable, mm)
- Relative head length (The ratio of head length to standard length, continuous variable, mm)
- Relative eye size (The ratio of the diameter of the eye to the body height passing through the center of the eye, continuous variable, mm)
- Relative snout length (The ratio of snout length to head length, continuous variable, mm)
- Relative head depth (The ratio of the body height passing through the center of the eye to body depth, continuous variable, mm)
- Pectoral fin position (The ratio of the distance from the pectoral fin to the anterior end of the fish to the standard length, continuous variable, mm)
- Swimming factor (The ratio of caudal peduncle depth to caudal fin depth, continuous variable, mm)
- Relative body depth (The ratio of body height to body width, continuous variable, mm)
- Rheophily (1- Rheophilic, 2- Limnophilic, 3- Eurytopic, categorical variable)
- Position of the water column (1- Benthic, 2- Benthopelagic, 3- Pelagic, categorical variable)
- Life span (1- (≤ 10), 2- (10- 20), 3- (> 20), categorical variable)
- Dietary preference (1- Filter feeding; 2- Carnivorous; 3- Herbivorous; 4- Omnivorous, categorical variable)
- Spawning mode (1- Batch spawning, 2- Total spawning, categorical variable)
- Migratory type 1- Reproductive migration, 2- Forage migration, 3- Overwinter migration, 4- Resident fish species, categorical variable)
- Reproductive mode (1- Buoyant eggs, 2- Floating eggs, 3- Adhesive/sinking eggs, 4- Other, categorical variable)
- Missing data codes: None
- Specialized formats or other abbreviations used: None
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DATA-SPECIFIC INFORMATION FOR: Table S2: The results of overall fish taxonomic β-diversity (β_OA_TD), functional β-diversity (β_OA_FD), and phylogenetic β-diversity (β_OA_PD) in the 12 non-native fish diversity hotspots during historical and current periods
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Number of variables: 3
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Number of cases/rows: 67
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Variable List:
- Overall fish taxonomic β-diversity (β_OA_TD) during historical and current periods
- Overall fish functional β-diversity (β_OA_FD) during historical and current periods
- Overall fish phylogenetic β-diversity (β_OA_PD) during historical and current periods
- Missing data codes: None
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Specialized formats or other abbreviations used: None
#########################################################################
DATA-SPECIFIC INFORMATION FOR: Fasta S1: Comparative sequences of the mitochondrial COⅠ gene (cytochrome c oxidase subunitⅠ) for each identified fish species.
- Variable List:
- Fish species
- Comparative sequences of the mitochondrial COⅠ gene
- Branch Lengths
- Bootstrap values
- Missing data codes: None
- Specialized formats or other abbreviations used: None