Data from: Biogenic origin of secondary eggshell units in dinosaur eggshells elucidates lost biomineralization process in maniraptoran dinosaurs
Data files
May 02, 2025 version files 2.38 GB
-
Astrochelys_(modern_turtle)_EBSD.zip
183.79 MB
-
Astrochelys_(turtle)_(PLM_images).zip
18.12 MB
-
Caiman_(crocodyliformes)_(PLM_images).zip
45.57 MB
-
Caiman_(modern_crocodyliformes)_EBSD.zip
37.62 MB
-
Dictyoolithus_(PLM_images).zip
3.48 MB
-
Dictyoolithus_EBSD.zip
77.86 MB
-
Faveoloolithus_(PLM_images).zip
8.75 MB
-
Faveoloolithus_EBSD.zip
71.65 MB
-
Megaloolithus_(PLM_images).zip
26.56 MB
-
Megaloolithus_(Titanosaur)_EBSD.zip
370.85 MB
-
Multifissoolithus_(PLM_images).zip
66.82 MB
-
Multifissoolithus_EBSD.zip
55.37 MB
-
Ovaloolithus_(PLM_images).zip
7.13 MB
-
Paraspheroolithus_(PLM_images).zip
8.06 MB
-
Paraspheroolithus_EBSD.zip
143.85 MB
-
Placoolithus_(PLM_images).zip
32.61 MB
-
Placoolithus_EBSD.zip
258.35 MB
-
README.md
3.07 KB
-
Stalicoolithidae_(PLM_images).zip
30.15 MB
-
Stalicoolithidae_EBSD.zip
318.54 MB
-
Stromatoolithus_(Hadrosaur)_EBSD.zip
183.03 MB
-
Stromatoolithus_(PLM_images).zip
11.77 MB
-
Testudoolithus_(fossil_turtle)_EBSD.zip
35.62 MB
-
Youngoolithus_(PLM_images).zip
13.52 MB
-
Youngoolithus_EBSD.zip
368.66 MB
Abstract
Although rarely seen in modern avian eggshells, secondary eggshell units are remarkable structures in non-avian dinosaur eggshells and provide paleobiological information. However, the origin of secondary eggshell units has rarely been studied, which has resulted in controversies in paleontology because abiogenic origin has also been suggested for the formation of secondary eggshell units. Here, we show that secondary eggshell units of non-avian dinosaur eggshells are biogenic structures using a combination of microscopic techniques, mainly electron backscatter diffraction (EBSD) and scanning electron microscope (SEM). The features of secondary eggshell units suggest that the formation mechanism of non-maniraptoran dinosaur eggshells is comparable to that of turtle and crocodile eggshells. Matrix fibers appear to be the initiators of secondary eggshell units. A weakening trend of secondary eggshell units toward non-avian maniraptoran dinosaurs supports that maniraptoran dinosaurs evolved a more organized physiological mechanism of eggshell formation.
Dataset DOI: 10.5061/dryad.6djh9w1cd
Description of the data and file structure
General Information
Data from: "Biogenic origin of secondary eggshell units in dinosaur eggshells elucidates lost biomineralization process in maniraptoran dinosaurs"
Please contact Seung Choi (seung0521@gmail.com; seung0521@snu.ac.kr) for information.
The data were collected during 2019-2025.
Data and File Overview
This submission contains PLM images (JPEG files), and EBSD files in.ctf format which can be viewed with an open source, such as ATEX EBSD software (http://www.atex-software.eu/)) and .cpr and .crc format which is available at Channel 5. The JPEG files in the EBSD file folders show the representative EBSD images (Inverse Pole Figure Y maps) that can be acquired from the respective EBSD files, so the users can check whether the EBSD files correspond to the ones that we authors have uploaded.
For following ootaxa and modern turtle (Astrochelys radiata) and crocodile (Caiman crocodilus) eggs, both PLM images and EBSD files are available:
Placoolithus tumiaolingensis: 19-1, 1-7, and 3-22, all of which belong to the egg clutch TML 4.
Dictyoolithid eggshell: 8889(g) (ZMNH M8889).
Faveoloolithus ningxiaensis: F5-1(IVPP V4709).
Youngoolithus xiaguanensis: Y1-1, Y3-1, and Y3-2, all of which belong to the egg clutch IVPP V5783.
Stalicoolithid eggshells: 8102, 8929-a, and 8929-b (ZMNH M8102 and M8929).
Megaloolithus siruguei: p2 and p4 (IVPP V31358).
Paraspheroolithus irenensis: 731 (IVPP V731).
Multifissoolithus megadermus: 2337 (IVPP V2337).
Stromatoolithus pinglingensis: cgd75 (IVPP V33471)
For Testudoolithus zelenitskyae (MOR 710), only EBSD files are available.
The PLM images contain the regions of interest photographed under both transmitted and polarized lights. The secondary eggshell units are marked by white and black arrows. Some of them are selected to perform EBSD analysis. Because secondary eggshell units can be observed more easily on IPF maps, the secondary eggshell units with typical crystallographic characteristics but not shown in the PLM images are also selected for EBSD analysis.
Some of the EBSD files correspond to the figures in the main text and supplementary figures, but some files are not shown as figures in the text.
With these files, one can reconstruct the diverse types of EBSD mappings, including inverse pole figures (IPF), grain boundary (GB), and Euler mappings.
Code/Software
ATEX EBSD software (http://www.atex-software.eu/). The version 3.3.0 is able to open the EBSD files that we uploaded.
One can click 1. Import data->2. Select data->3. Select “.ctf” files that we uploaded->4. Click “Create ATEX file”-> Then one can see the reconstructed EBSD images.
The thin sections are prepared following the usual thin section preparation methods of geological studies and the images were obtained using a polarized light microscope.
EBSD analysis of fossil eggshells followed an established protocol (see Choi et al. 2023, Journal of Vertebrate Paleontology).
